Citrus Sinensis ID: 006903
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 626 | 2.2.26 [Sep-21-2011] | |||||||
| O48788 | 658 | Probable inactive recepto | yes | no | 0.940 | 0.895 | 0.365 | 1e-98 | |
| Q9LP77 | 655 | Probable inactive recepto | no | no | 0.888 | 0.848 | 0.341 | 2e-85 | |
| Q9FHK7 | 640 | Probable leucine-rich rep | no | no | 0.896 | 0.876 | 0.325 | 1e-81 | |
| Q9FL63 | 614 | Inactive leucine-rich rep | no | no | 0.945 | 0.964 | 0.316 | 3e-81 | |
| Q9M9C5 | 670 | Probable leucine-rich rep | no | no | 0.864 | 0.807 | 0.338 | 3e-81 | |
| Q9SUQ3 | 638 | Probable inactive recepto | no | no | 0.897 | 0.880 | 0.338 | 6e-81 | |
| C0LGR9 | 676 | Probable LRR receptor-lik | no | no | 0.940 | 0.871 | 0.329 | 1e-80 | |
| Q84MA9 | 652 | Inactive leucine-rich rep | no | no | 0.931 | 0.894 | 0.345 | 1e-80 | |
| Q9SH71 | 587 | Putative inactive recepto | no | no | 0.891 | 0.950 | 0.340 | 3e-80 | |
| Q9C9Y8 | 640 | Probable inactive recepto | no | no | 0.902 | 0.882 | 0.340 | 8e-79 |
| >sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 360 bits (925), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 234/640 (36%), Positives = 351/640 (54%), Gaps = 51/640 (7%)
Query: 7 WALPVL--VFLLFPVVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWV 64
W L L + LL V SE E K+AL+ F++++ N + WN S C+ WV
Sbjct: 6 WVLNSLFSILLLTQRVNSESTAE-KQALLTFLQQIPHENRLQ-----WNESDSACN--WV 57
Query: 65 GVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQL 124
GV C+S Q S+ + L G L G + + S+ + L VLSL N ++G + + SN L
Sbjct: 58 GVECNSNQSSIHSLRLPGTGLVGQIPSGSLGRLTELRVLSLRSNRLSGQIPSDFSNLTHL 117
Query: 125 THLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP----DLSRISGLLTFFAENNQ 180
LY+ N+ SG P S ++LNNL RLDIS+NNF+ +P +L+ ++GL F NN
Sbjct: 118 RSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGL---FLGNNG 174
Query: 181 LRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNAC-----P 235
G +P L+ FNVSNNNL+G +P R A+SF+GN LCG PL C
Sbjct: 175 FSGNLPSISL-GLVDFNVSNNNLNGSIPSSLSRFSAESFTGNVDLCGGPL-KPCKSFFVS 232
Query: 236 PTPPPIKESKGSSTNQVFLFSGYILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVALDI 295
P+P P S + +N++ + + ++V LV+ ++K +
Sbjct: 233 PSPSP---SLINPSNRLSSKKSKLSKAAIVAIIVASALVALLLLALLLFLCLRKRRGSNE 289
Query: 296 NSNKRSSISSVHR------AGDNRSEYSITSVDSGAASSS---LVVLTSSKVNKLKFEDL 346
K+ + V G + S+ +T SG + +V T V EDL
Sbjct: 290 ARTKQPKPAGVATRNVDLPPGASSSKEEVTGTSSGMGGETERNKLVFTEGGVYSFDLEDL 349
Query: 347 LRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPP 406
LRA AE+LG+G G+ Y+ VL++G + VKRL+D S ++F+ +M+ + +KHPNV+P
Sbjct: 350 LRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVMASKKEFETQMEVVGKIKHPNVIPL 409
Query: 407 LAYYCSKQEKLLVYEYQPNGSLFNLLHGSE-NGQS-FDWGSRLRVAACVAKALALIHEEL 464
AYY SK EKLLV+++ P GSL LLHGS +G++ DW +R+R+A A+ LA +H
Sbjct: 410 RAYYYSKDEKLLVFDFMPTGSLSALLHGSRGSGRTPLDWDNRMRIAITAARGLAHLHVSA 469
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISNQMCS 522
+ + HGN+K++NIL + N + C+S+YGL + + + + LA + ++ +
Sbjct: 470 K---LVHGNIKASNILLHPNQDTCVSDYGLNQLFSNSSPPNRLAGYHAPEVLETRK---V 523
Query: 523 TIKADVYGFGVILLELLTGK-----LVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577
T K+DVY FGV+LLELLTGK + G +L WV SVVREEWT EVFD L+
Sbjct: 524 TFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVLSVVREEWTAEVFDVELMRYHN 583
Query: 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617
EE M++LLQ+A+ C++ P++RP M +V MI ++ E
Sbjct: 584 IEEEMVQLLQIAMACVSTVPDQRPVMQEVLRMIEDVNRSE 623
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LP77|Y1848_ARATH Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 213/623 (34%), Positives = 341/623 (54%), Gaps = 67/623 (10%)
Query: 39 LSVGNAARDPNWGWN-RSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKT 97
LS+ +A + WN + + PC+ W GV C+S + V + L G LSG +
Sbjct: 41 LSLRSAVGGRTFRWNIKQTSPCN--WAGVKCESNR--VTALRLPGVALSGDIPEGIFGNL 96
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L LSL N ++G++ +++S L HLY+ N+ SG +P+ L L++L RL++++N+
Sbjct: 97 TQLRTLSLRLNALSGSLPKDLSTSSNLRHLYLQGNRFSGEIPEVLFSLSHLVRLNLASNS 156
Query: 158 FSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGA 216
F+ E+ + ++ L T F ENNQL G IP+ D L+QFNVSNN+L+G +P R +
Sbjct: 157 FTGEISSGFTNLTKLKTLFLENNQLSGSIPDLDLP-LVQFNVSNNSLNGSIPKNLQRFES 215
Query: 217 DSFSGNPGLCGKPLPNACPP--------------TPPPIKESKGSSTNQVFLFSGYILLG 262
DSF LCGKPL CP TPP ++ S+ SG + G
Sbjct: 216 DSFL-QTSLCGKPL-KLCPDEETVPSQPTSGGNRTPPSVEGSEEKKKKNKL--SGGAIAG 271
Query: 263 L-------FILLLVVLKLVSKNKQKEEKTDVIKKEVALDINSNKRSS--ISSVHRAGDNR 313
+ F L++++L ++ + K K+ A+DI++ K+ I A DN
Sbjct: 272 IVIGCVVGFALIVLILMVLCRKKSN-------KRSRAVDISTIKQQEPEIPGDKEAVDNG 324
Query: 314 SEYSIT-------------SVDSGAASSSLVVL-TSSKVNKLKFEDLLRAPAELLGRGKH 359
+ YS++ S +G A+ LV ++KV EDLLRA AE+LG+G
Sbjct: 325 NVYSVSAAAAAAMTGNGKASEGNGPATKKLVFFGNATKV--FDLEDLLRASAEVLGKGTF 382
Query: 360 GSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLV 419
G+ Y+ VLD ++AVKRL+D ++ ++FK +++ + + H N++P AYY S+ EKLLV
Sbjct: 383 GTAYKAVLDAVTVVAVKRLKDVMMADKEFKEKIELVGAMDHENLVPLRAYYFSRDEKLLV 442
Query: 420 YEYQPNGSLFNLLHGSEN-GQS-FDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSN 477
Y++ P GSL LLHG+ G+S +W R R+A A+ L +H + +HGN+KS+
Sbjct: 443 YDFMPMGSLSALLHGNRGAGRSPLNWDVRSRIAIGAARGLDYLHSQ--GTSTSHGNIKSS 500
Query: 478 NILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLE 537
NIL + + +S++GL + + + + ++++ + K DVY FGV+LLE
Sbjct: 501 NILLTKSHDAKVSDFGLAQLVGSSATNPNRATGYRAPEVTDPKRVSQKGDVYSFGVVLLE 560
Query: 538 LLTGKLVQNN-----GFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML-KLLQVALR 591
L+TGK N+ G +L WV SV R+EW EVFD L++ A EE M+ +++Q+ L
Sbjct: 561 LITGKAPSNSVMNEEGVDLPRWVKSVARDEWRREVFDSELLSLATDEEEMMAEMVQLGLE 620
Query: 592 CINQSPNERPSMNQVAVMINNIK 614
C +Q P++RP M++V + N++
Sbjct: 621 CTSQHPDQRPEMSEVVRKMENLR 643
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9FHK7|Y5516_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 325/618 (52%), Gaps = 57/618 (9%)
Query: 29 KRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIV--LDGFNLS 86
++AL+ F + P WN++ CS W+G+TCD + R + L G L
Sbjct: 33 EQALLNF-----AASVPHPPKLNWNKNLSLCSS-WIGITCDESNPTSRVVAVRLPGVGLY 86
Query: 87 GILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLP-DSLSKL 145
G + ++ K +L VLSL N++ GT+ +I + L +LY+ N SG L +SL +
Sbjct: 87 GSIPPATLGKLDALKVLSLRSNSLFGTLPSDILSLPSLEYLYLQHNNFSGELTTNSLPSI 146
Query: 146 N-NLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNL 203
+ L LD+S N+ S +P L +S + + +NN G I D ++ N+S NNL
Sbjct: 147 SKQLVVLDLSYNSLSGNIPSGLRNLSQITVLYLQNNSFDGPIDSLDLPSVKVVNLSYNNL 206
Query: 204 SGPVPGVNGRLGADSFSGNPGLCGKPLPNACP-----PT---PPPIKES------KGSST 249
SGP+P + SF GN LCG PL NAC P+ P P+ E+ + S
Sbjct: 207 SGPIPEHLKKSPEYSFIGNSLLCGPPL-NACSGGAISPSSNLPRPLTENLHPVRRRQSKA 265
Query: 250 NQVFLFSGYILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVALDINSNKRSSISSVHRA 309
+ + G + LF+ ++ ++ LV K K++E + ++ ++ +NS K S +
Sbjct: 266 YIIAIVVGCSVAVLFLGIVFLVCLVKKTKKEEGGGEGVRTQMG-GVNSKKPQDFGSGVQD 324
Query: 310 GDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDD 369
+ + + + EDLL+A AE+LG+G G+ Y+ VL+D
Sbjct: 325 PEKNKLFFFERCN----------------HNFDLEDLLKASAEVLGKGSFGTAYKAVLED 368
Query: 370 GLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428
+ VKRLR+ S ++F+ +M+ + + +H N +P LAYY SK EKLLVY+Y GSL
Sbjct: 369 TTAVVVKRLREVVASKKEFEQQMEIVGKINQHSNFVPLLAYYYSKDEKLLVYKYMTKGSL 428
Query: 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPC 488
F ++HG+ + DW +R+++A +KA++ +H HG++KS+NIL ++EPC
Sbjct: 429 FGIMHGNRGDRGVDWETRMKIATGTSKAISYLHSL----KFVHGDIKSSNILLTEDLEPC 484
Query: 489 ISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGK--LVQN 546
+S+ L+ N + +T ++ + ++DVY FGV++LE+LTGK L Q
Sbjct: 485 LSDTSLVTLFNLP-THTPRTIGYNAPEVIETRRVSQRSDVYSFGVVILEMLTGKTPLTQP 543
Query: 547 N------GFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNER 600
+L WV SVVREEWT EVFD L+ EE M+++LQ+AL C+ ++P R
Sbjct: 544 GLEDERVVIDLPRWVRSVVREEWTAEVFDVELLKFQNIEEEMVQMLQLALACVARNPESR 603
Query: 601 PSMNQVAVMINNIKEEEE 618
P M +VA MI +++ ++
Sbjct: 604 PKMEEVARMIEDVRRLDQ 621
|
Probable leucine-rich repeat receptor-like protein kinase. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q9FL63|Y5410_ARATH Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At5g24100 OS=Arabidopsis thaliana GN=At5g24100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 328/638 (51%), Gaps = 46/638 (7%)
Query: 1 MDRRSIWALPVLVFLLF--PVVKSEVEEEV---KRALVQFMEKLSVGNAARDPNWGWNRS 55
M R + ++FL F + S+V ++ ++AL+ F+ N + WN S
Sbjct: 1 MSRGRSFIFYFVLFLFFGSSALYSQVTGDLAGDRQALLDFLN-----NIIHPRSLAWNTS 55
Query: 56 SDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVS 115
S C+ W GVTCD V + L G +L G++ ++ + L +LSL N + G
Sbjct: 56 SPVCT-TWPGVTCDIDGTRVTALHLPGASLLGVIPPGTISRLSELQILSLRSNGLRGPFP 114
Query: 116 QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP-DLSRISGLLTF 174
+ K+L + +G N+ SG LP + NL LD+ +N F+ +P + ++GL++
Sbjct: 115 IDFLQLKKLKAISLGNNRFSGPLPSDYATWTNLTVLDLYSNRFNGSIPAGFANLTGLVSL 174
Query: 175 FAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNAC 234
N G IP+ + L + N SNNNL+G +P R G +FSGN + NA
Sbjct: 175 NLAKNSFSGEIPDLNLPGLRRLNFSNNNLTGSIPNSLKRFGNSAFSGNNLV----FENAP 230
Query: 235 PPTPPPIKESKGSSTNQVFLFSGYIL-------LGLFILLLVVLKLVSKNKQKEEKTDVI 287
PP KE K N +++ IL +F ++ VV+ + +Q++ +T+
Sbjct: 231 PPAVVSFKEQK---KNGIYISEPAILGIAISVCFVIFFVIAVVIIVCYVKRQRKSETEPK 287
Query: 288 KKEVALDINSNKRSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLL 347
++ L + K S V + G E +I ++ + + ++ S + EDLL
Sbjct: 288 PDKLKL---AKKMPSEKEVSKLG---KEKNIEDMEDKSEINKVMFFEGSNL-AFNLEDLL 340
Query: 348 RAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPL 407
A AE LG+G G Y+ VL+D ++AVKRL+D +S +DFK++M+ + ++KH NV P
Sbjct: 341 IASAEFLGKGVFGMTYKAVLEDSKVIAVKRLKDIVVSRKDFKHQMEIVGNIKHENVAPLR 400
Query: 408 AYYCSKQEKLLVYEYQPNGSLFNLLHG---SENGQSFDWGSRLRVAACVAKALALIHEEL 464
AY CSK+EKL+VY+Y NGSL LHG E +W +RLR VAK L IH +
Sbjct: 401 AYVCSKEEKLMVYDYDSNGSLSLRLHGKNADEGHVPLNWETRLRFMIGVAKGLGHIHTQ- 459
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQSFLAQTSSLKINDISNQMC 521
+AHGN+KS+N+ N+ CISE GL + N S + ++++
Sbjct: 460 ---NLAHGNIKSSNVFMNSEGYGCISEAGLPLLTNPVVRADSSARSVLRYRAPEVTDTRR 516
Query: 522 STIKADVYGFGVILLELLTGKLVQNN---GFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578
ST ++D+Y FG+++LE LTG+ + ++ G +L WV+ V+ ++WT EVFD L+
Sbjct: 517 STPESDIYSFGILMLETLTGRSIMDDRKEGIDLVVWVNDVISKQWTGEVFDLELVKTPNV 576
Query: 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616
E ++L++LQ+ C P +RP M +V + I+ +
Sbjct: 577 EAKLLQMLQLGTSCTAMVPAKRPDMVKVVETLEEIERD 614
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9M9C5|Y1680_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g68400 OS=Arabidopsis thaliana GN=At1g68400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 206/609 (33%), Positives = 332/609 (54%), Gaps = 68/609 (11%)
Query: 52 WNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIA 111
WN +++PC +W GV+C+ + V ++VL+ NL+G + + + + VLSL+ NN++
Sbjct: 51 WNTTTNPC--QWTGVSCN--RNRVTRLVLEDINLTGSISSLTSLTSLR--VLSLKHNNLS 104
Query: 112 GTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP-DLSRISG 170
G + +SN L L++ N+ SGN P S++ L L RLD+S NNFS ++P DL+ ++
Sbjct: 105 GPIPN-LSNLTALKLLFLSNNQFSGNFPTSITSLTRLYRLDLSFNNFSGQIPPDLTDLTH 163
Query: 171 LLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPL 230
LLT E+N+ G IP + S+L FNVS NN +G +P + F+ NP LCG PL
Sbjct: 164 LLTLRLESNRFSGQIPNINLSDLQDFNVSGNNFNGQIPNSLSQFPESVFTQNPSLCGAPL 223
Query: 231 --------------------------PNACPPTPPPIKES-KGSSTNQVFLFSGY-ILLG 262
P P +P I K ++T+++ S I+LG
Sbjct: 224 LKCTKLSSDPTKPGRPDEAKASPLNKPETVPSSPTSIHGGDKSNNTSRISTISLIAIILG 283
Query: 263 LFILLLVVLKLVSKNKQKEEKTDVIKKEVALDINSNKRSSISSVHRAGDNRSEYSITSVD 322
FI+L V L+ ++ +N K S I + + + Y ++ +
Sbjct: 284 DFIILSFVSLLLYYCFWRQ-----------YAVNKKKHSKILEGEKIVYSSNPYPTSTQN 332
Query: 323 SGAAS------SSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVK 376
+ + +V ++ + + EDLLRA AE+LG+G G+ Y+ VL+DG +AVK
Sbjct: 333 NNNQNQQVGDKGKMVFFEGTR--RFELEDLLRASAEMLGKGGFGTAYKAVLEDGNEVAVK 390
Query: 377 RLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHG 434
RL+D ++F+ +M+ + ++H N++ AYY +++EKLLVY+Y PNGSLF LLHG
Sbjct: 391 RLKDAVTVAGKKEFEQQMEVLGRLRHTNLVSLKAYYFAREEKLLVYDYMPNGSLFWLLHG 450
Query: 435 SEN-GQS-FDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEY 492
+ G++ DW +RL++AA A+ LA IH + + HG++KS N+L + + +S++
Sbjct: 451 NRGPGRTPLDWTTRLKIAAGAARGLAFIHGSCKTLKLTHGDIKSTNVLLDRSGNARVSDF 510
Query: 493 GLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGK---LVQNN-- 547
GL + +A+++ + ++ + T K+DVY FGV+LLE+LTGK +V+
Sbjct: 511 GLSIFAPSQT--VAKSNGYRAPELIDGRKHTQKSDVYSFGVLLLEILTGKCPNMVETGHS 568
Query: 548 --GFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQ 605
+L WV SVVREEWT EVFD L+ EE M+ LLQ+A+ C + + RP M
Sbjct: 569 GGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMACTAVAADHRPKMGH 628
Query: 606 VAVMINNIK 614
V +I +I+
Sbjct: 629 VVKLIEDIR 637
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SUQ3|Y4374_ARATH Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 302 bits (773), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 205/606 (33%), Positives = 321/606 (52%), Gaps = 44/606 (7%)
Query: 27 EVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLS 86
E KRAL++F L++ R NW N +S C+ W GVTC+ + + L G L+
Sbjct: 28 EDKRALLEF---LTIMQPTRSLNW--NETSQVCN-IWTGVTCNQDGSRIIAVRLPGVGLN 81
Query: 87 GILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLN 146
G + ++ + +L VLSL N I+G ++ K L LY+ N LSG LP S
Sbjct: 82 GQIPPNTISRLSALRVLSLRSNLISGEFPKDFVELKDLAFLYLQDNNLSGPLPLDFSVWK 141
Query: 147 NLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFD-FSNLLQFNVSNN-NL 203
NL +++SNN F+ +P LSR+ + + NN L G IP+ S+L ++SNN +L
Sbjct: 142 NLTSVNLSNNGFNGTIPSSLSRLKRIQSLNLANNTLSGDIPDLSVLSSLQHIDLSNNYDL 201
Query: 204 SGPVPGVNGRLGADSFSGNPGLCGKPLPNACPPTPPPIKESKGSSTNQ---------VFL 254
+GP+P R S++G + P N TPPP E ++ VFL
Sbjct: 202 AGPIPDWLRRFPFSSYTGIDII--PPGGNYTLVTPPPPSEQTHQKPSKARFLGLSETVFL 259
Query: 255 FSGYILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVALDINSNKRSSISSVHRAGDNRS 314
+ + I L + V ++K + D + I+ NK + + G
Sbjct: 260 LIVIAVSIVVITALAFVLTVCYVRRKLRRGDGV-------ISDNK------LQKKGGMSP 306
Query: 315 EYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLA 374
E ++ ++ ++ L + EDLLRA AE+LG+G G+ Y+ VL+D +A
Sbjct: 307 EKFVSRMED--VNNRLSFFEGCNYS-FDLEDLLRASAEVLGKGTFGTTYKAVLEDATSVA 363
Query: 375 VKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHG 434
VKRL+D + DF+ +M+ I +KH NV+ AYY SK EKL+VY+Y GS+ +LLHG
Sbjct: 364 VKRLKDVAAGKRDFEQQMEIIGGIKHENVVELKAYYYSKDEKLMVYDYFSRGSVASLLHG 423
Query: 435 S--ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEY 492
+ EN DW +R+++A AK +A IH+E + HGN+KS+NI N+ C+S+
Sbjct: 424 NRGENRIPLDWETRMKIAIGAAKGIARIHKE-NNGKLVHGNIKSSNIFLNSESNGCVSDL 482
Query: 493 GLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGK-----LVQNN 547
GL + +++ + + ++++ S+ +DVY FGV+LLELLTGK +
Sbjct: 483 GLTAVMSPLAPPISRQAGYRAPEVTDTRKSSQLSDVYSFGVVLLELLTGKSPIHTTAGDE 542
Query: 548 GFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVA 607
+L WVHSVVREEWT EVFD L+ EE M+++LQ+A+ C+ ++ ++RP M+ +
Sbjct: 543 IIHLVRWVHSVVREEWTAEVFDIELLRYTNIEEEMVEMLQIAMSCVVKAADQRPKMSDLV 602
Query: 608 VMINNI 613
+I N+
Sbjct: 603 RLIENV 608
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|C0LGR9|Y4312_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidopsis thaliana GN=At4g31250 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 216/656 (32%), Positives = 332/656 (50%), Gaps = 67/656 (10%)
Query: 6 IWALPVLVFLLFPVVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSG---- 61
+++L ++V L + + + + AL++F K S+ NA+ GW+ PCSG
Sbjct: 10 VYSLLLIVLLFVSPIYGDGDAD---ALLKF--KSSLVNAS--SLGGWDSGEPPCSGDKGS 62
Query: 62 --KWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEIS 119
KW GV C + SV + L+ +LSG LD ++ + L +S N+ G + + I
Sbjct: 63 DSKWKGVMCSN--GSVFALRLENMSLSGELDVQALGSIRGLKSISFMRNHFEGKIPRGID 120
Query: 120 NCKQLTHLYVGRNKLSGNLP-DSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAE 177
L HLY+ N+ +G + D S + L ++ + N FS E+P+ L ++ L E
Sbjct: 121 GLVSLAHLYLAHNQFTGEIDGDLFSGMKALLKVHLEGNRFSGEIPESLGKLPKLTELNLE 180
Query: 178 NNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNACPPT 237
+N G IP F NL+ NV+NN L G +P G + FSGN GLCG PL C T
Sbjct: 181 DNMFTGKIPAFKQKNLVTVNVANNQLEGRIPLTLGLMNITFFSGNKGLCGAPLL-PCRYT 239
Query: 238 PPPIKESKGSSTNQVFLFSGYILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVALDIN- 296
PP VFL + +L + +L+ V L + ++++ + D I+ +
Sbjct: 240 RPPF--------FTVFLLA-LTILAVVVLITVFLSVCILSRRQGKGQDQIQNHGVGHFHG 290
Query: 297 -----------SNKRSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVN---KLK 342
S K S S V+R N + ++ SGA S + K KL
Sbjct: 291 QVYGQPEQQQHSEKSSQDSKVYRKLANETVQRDSTATSGAISVGGLSPDEDKRGDQRKLH 350
Query: 343 F----------EDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWS-ISSEDFKNR 391
F +D+LRA AE+LG G GS Y+ L G + VKR R S I E+F +
Sbjct: 351 FVRNDQERFTLQDMLRASAEVLGSGGFGSSYKAALSSGRAVVVKRFRFMSNIGREEFYDH 410
Query: 392 MQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSEN-GQ-SFDWGSRLRV 449
M+KI + HPN+LP +A+Y K+EKLLV Y NGSL NLLH + GQ DW RL++
Sbjct: 411 MKKIGRLSHPNLLPLIAFYYRKEEKLLVTNYISNGSLANLLHANRTPGQVVLDWPIRLKI 470
Query: 450 AACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS--FLAQ 507
V + LA ++ + + HG+LKS+N+L + N EP +++Y L+ N DQS F+
Sbjct: 471 VRGVTRGLAYLYRVFPDLNLPHGHLKSSNVLLDPNFEPLLTDYALVPVVNRDQSQQFMV- 529
Query: 508 TSSLKINDISNQMCSTIKADVYGFGVILLELLTGK-----LVQNNGFN--LATWVHSVVR 560
+ K + + Q ++ ++DV+ G+++LE+LTGK L Q G + LA WV SV R
Sbjct: 530 --AYKAPEFTQQDRTSRRSDVWSLGILILEILTGKFPANYLRQGKGADDELAAWVESVAR 587
Query: 561 EEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616
EWT +VFD+ + A E +MLKLL++ LRC + +R +++ I + +
Sbjct: 588 TEWTADVFDKEMKAGKEHEAQMLKLLKIGLRCCDWDIEKRIELHEAVDRIEEVDRD 643
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q84MA9|Y1063_ARATH Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 OS=Arabidopsis thaliana GN=At1g60630 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 222/642 (34%), Positives = 340/642 (52%), Gaps = 59/642 (9%)
Query: 6 IWALPVLVFLLFPVVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVG 65
++ L FL+ PV S+VE AL+ + N+ W R +DPC+ W G
Sbjct: 8 MFFLVFAFFLISPVRSSDVE-----ALLSLKSSIDPSNSI---PW---RGTDPCN--WEG 54
Query: 66 VTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLT 125
V + V K+VL+ NLSG L+ S+ + L VLS + N+++G++ +S L
Sbjct: 55 VK-KCMKGRVSKLVLENLNLSGSLNGKSLNQLDQLRVLSFKGNSLSGSIPN-LSGLVNLK 112
Query: 126 HLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGG 184
LY+ N SG P+SL+ L+ LK + +S N FS ++P L R+S L TF+ ++N G
Sbjct: 113 SLYLNDNNFSGEFPESLTSLHRLKTVVLSRNRFSGKIPSSLLRLSRLYTFYVQDNLFSGS 172
Query: 185 IPEFDFSNLLQFNVSNNNLSGPVPGVNG--RLGADSFSGNPGLCGKPLPNAC-------- 234
IP + + L FNVSNN LSG +P R SF+ N LCG + N+C
Sbjct: 173 IPPLNQATLRFFNVSNNQLSGHIPPTQALNRFNESSFTDNIALCGDQIQNSCNDTTGITS 232
Query: 235 -PPTPPPIKESKGSS-TNQVFLFSGYILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVA 292
P P I +K S T + + SG I G+ ILLL L + ++K K+ ++
Sbjct: 233 TPSAKPAIPVAKTRSRTKLIGIISGSICGGILILLLTFLLICLLWRRKRSKSKREERRSK 292
Query: 293 LDINSNKRSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKF--EDLLRAP 350
S + + + D +++ +S S +V + +++ +DLL+A
Sbjct: 293 RVAESKEAKTAETEEGTSDQKNKRFSWEKESEEGSVGTLVFLGRDITVVRYTMDDLLKAS 352
Query: 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSED-FKNRMQKIDHVKHPNVLPPLAY 409
AE LGRG GS Y+ V++ G ++ VKRL+D D FK ++ + +KHPN++P AY
Sbjct: 353 AETLGRGTLGSTYKAVMESGFIITVKRLKDAGFPRMDEFKRHIEILGRLKHPNLVPLRAY 412
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSE---NGQSFDWGSRLRVAACVAKALALIHEELRE 466
+ +K+E LLVY+Y PNGSLF+L+HGS+ +G+ W S L++A +A L IH+
Sbjct: 413 FQAKEECLLVYDYFPNGSLFSLIHGSKVSGSGKPLHWTSCLKIAEDLAMGLVYIHQ---N 469
Query: 467 DGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKI-------NDISNQ 519
G+ HGNLKS+N+L + E C+++YGL ++ HD + TS+ + D+ +
Sbjct: 470 PGLTHGNLKSSNVLLGPDFESCLTDYGL--SDLHDPYSIEDTSAASLFYKAPECRDL--R 525
Query: 520 MCSTIKADVYGFGVILLELLTGK-----LVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574
ST ADVY FGV+LLELLTG+ LV G +++TWV +V EE EV
Sbjct: 526 KASTQPADVYSFGVLLLELLTGRTSFKDLVHKYGSDISTWVRAVREEE------TEVSEE 579
Query: 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616
ASEE++ LL +A C+ P RP+M +V M+ + + E
Sbjct: 580 LNASEEKLQALLTIATACVAVKPENRPAMREVLKMVKDARAE 621
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SH71|Y1421_ARATH Putative inactive receptor-like protein kinase At1g64210 OS=Arabidopsis thaliana GN=At1g64210 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 300 bits (767), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 210/617 (34%), Positives = 304/617 (49%), Gaps = 59/617 (9%)
Query: 13 VFLLFPVVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQ 72
+ L F ++ S+ E+ K+AL+ F LS N++R WN+SSD C W GVTC+
Sbjct: 10 LILCFVLISSQTLEDDKKALLHF---LSSFNSSR---LHWNQSSDVCH-SWTGVTCNENG 62
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
+ + L +G++ ++ + SL LSL +N+ G + +N K LTHLY+ N
Sbjct: 63 DRIVSVRLPAVGFNGLIPPFTISRLSSLKFLSLRKNHFTGDFPSDFTNLKSLTHLYLQHN 122
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSSELP-DLSRISGLLTFFAENNQLRGGIPEFDFS 191
LSG L S+L NLK LD+SNN F+ +P LS ++ L NN G IP
Sbjct: 123 HLSGPLLAIFSELKNLKVLDLSNNGFNGSIPTSLSGLTSLQVLNLANNSFSGEIPNLHLP 182
Query: 192 NLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNACPPTPPPIKESKGSSTNQ 251
L Q N+SNN L G +P R + +FSGN L P S+
Sbjct: 183 KLSQINLSNNKLIGTIPKSLQRFQSSAFSGNN------LTERKKQRKTPFGLSQ-----L 231
Query: 252 VFLFSGYILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVALDINSNKRSSISSVHRAGD 311
FL IL +L + L + I ++ IS R D
Sbjct: 232 AFLL---ILSAACVLCVSGLSFIM-------------------ITCFGKTRISGKLRKRD 269
Query: 312 NRSE-YSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDG 370
+ S + TS D ++ + + +DLL + AE+LG+G G+ Y+V ++D
Sbjct: 270 SSSPPGNWTSRDDNTEEGGKIIFFGGRNHLFDLDDLLSSSAEVLGKGAFGTTYKVTMEDM 329
Query: 371 LMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430
+ VKRL++ + +F+ +M+ I ++H NV AYY SK +KL VY Y +GSLF
Sbjct: 330 STVVVKRLKEVVVGRREFEQQMEIIGMIRHENVAELKAYYYSKDDKLAVYSYYNHGSLFE 389
Query: 431 LLHGSENGQS---FDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEP 487
+LHG+ DW +RLR+A A+ LA IH E HGN+KS+NI ++
Sbjct: 390 ILHGNRGRYHRVPLDWDARLRIATGAARGLAKIH----EGKFIHGNIKSSNIFLDSQCYG 445
Query: 488 CISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGK----- 542
CI + GL TS +I++ ST +DVY FGV+LLELLTGK
Sbjct: 446 CIGDVGLTTIMRSLPQTTCLTSGYHAPEITDTRRSTQFSDVYSFGVVLLELLTGKSPVSQ 505
Query: 543 --LVQNNGFN--LATWVHSVVREEWTVEVFD-EVLIAEAASEERMLKLLQVALRCINQSP 597
LV G N LA+W+ SVV +EWT EVFD E+L EE M+++LQ+ L C+
Sbjct: 506 AELVPTGGENMDLASWIRSVVAKEWTGEVFDMEILSQSGGFEEEMVEMLQIGLACVALKQ 565
Query: 598 NERPSMNQVAVMINNIK 614
ERP + QV +I +I+
Sbjct: 566 QERPHIAQVLKLIEDIR 582
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9C9Y8|Y3868_ARATH Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 295 bits (755), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 209/614 (34%), Positives = 315/614 (51%), Gaps = 49/614 (7%)
Query: 26 EEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNL 85
E K+AL++F S+ +R NW S+ P W G+TC V + L G L
Sbjct: 26 ESDKQALLEFA---SLVPHSRKLNW---NSTIPICASWTGITCSKNNARVTALRLPGSGL 79
Query: 86 SGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKL 145
G L + K +L ++SL N++ G + I + + LY N SG +P LS
Sbjct: 80 YGPLPEKTFEKLDALRIISLRSNHLQGNIPSVILSLPFIRSLYFHENNFSGTIPPVLS-- 137
Query: 146 NNLKRLDISNNNFSSELP-DLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
+ L LD+S N+ S +P L ++ L +NN L G IP L N+S NNL+
Sbjct: 138 HRLVNLDLSANSLSGNIPTSLQNLTQLTDLSLQNNSLSGPIPNLP-PRLKYLNLSFNNLN 196
Query: 205 GPVPGVNGRLGADSFSGNPGLCGKPLPNACP-----PTPPPIKESK-------GSSTNQV 252
G VP A SF GN LCG PL CP P+P P ++ G T +
Sbjct: 197 GSVPSSVKSFPASSFQGNSLLCGAPL-TPCPENTTAPSPSPTTPTEGPGTTNIGRGTAKK 255
Query: 253 FLFSGYIL---LGLFILLLVVLKLVSKNKQKEEKTDVIKKEVALDINSNKRSSISSVHRA 309
L +G I+ +G +LL ++L +++ K K D + A+ RS
Sbjct: 256 VLSTGAIVGIAVGGSVLLFIILAIITLCCAK--KRDGGQDSTAVPKAKPGRS-------- 305
Query: 310 GDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDD 369
DN++E + V A + LV S N EDLLRA AE+LG+G +G+ Y+ +L++
Sbjct: 306 -DNKAEEFGSGVQE-AEKNKLVFFEGSSYN-FDLEDLLRASAEVLGKGSYGTTYKAILEE 362
Query: 370 GLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428
G + VKRL++ + +F+ +M+ + + H NV P AYY SK EKLLVY+Y G+
Sbjct: 363 GTTVVVKRLKEVAAGKREFEQQMEAVGRISPHVNVAPLRAYYFSKDEKLLVYDYYQGGNF 422
Query: 429 FNLLHGSENG--QSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME 486
LLHG+ G + DW +RLR+ A+ ++ IH + HGN+KS N+L +
Sbjct: 423 SMLLHGNNEGGRAALDWETRLRICLEAARGISHIHSASGAK-LLHGNIKSPNVLLTQELH 481
Query: 487 PCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLV-Q 545
C+S++G+ +H +++ + + T K+DVY FGV+LLE+LTGK +
Sbjct: 482 VCVSDFGIAPLMSHHTLIPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGK 541
Query: 546 NNG----FNLATWVHSVVREEWTVEVFDEVLIAEAAS-EERMLKLLQVALRCINQSPNER 600
G +L WV SVVREEWT EVFD LI + + EE M+++LQ+A+ C+++ P+ R
Sbjct: 542 TTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQIAMACVSKHPDSR 601
Query: 601 PSMNQVAVMINNIK 614
PSM +V M+ I+
Sbjct: 602 PSMEEVVNMMEEIR 615
|
Arabidopsis thaliana (taxid: 3702) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 626 | ||||||
| 359491256 | 976 | PREDICTED: receptor-like protein kinase | 0.995 | 0.638 | 0.660 | 0.0 | |
| 224133488 | 627 | predicted protein [Populus trichocarpa] | 0.987 | 0.985 | 0.639 | 0.0 | |
| 224119278 | 624 | predicted protein [Populus trichocarpa] | 0.992 | 0.995 | 0.646 | 0.0 | |
| 255540739 | 592 | serine-threonine protein kinase, plant-t | 0.936 | 0.989 | 0.644 | 0.0 | |
| 356518991 | 589 | PREDICTED: probable inactive receptor ki | 0.928 | 0.986 | 0.567 | 0.0 | |
| 147860397 | 1090 | hypothetical protein VITISV_043284 [Viti | 0.961 | 0.552 | 0.554 | 0.0 | |
| 359488856 | 610 | PREDICTED: probable inactive receptor ki | 0.960 | 0.985 | 0.552 | 0.0 | |
| 255552648 | 665 | serine-threonine protein kinase, plant-t | 0.934 | 0.879 | 0.545 | 0.0 | |
| 356541594 | 606 | PREDICTED: LRR receptor-like serine/thre | 0.940 | 0.971 | 0.541 | 1e-179 | |
| 297733816 | 802 | unnamed protein product [Vitis vinifera] | 0.734 | 0.573 | 0.627 | 1e-166 |
| >gi|359491256|ref|XP_003634250.1| PREDICTED: receptor-like protein kinase HSL1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/625 (66%), Positives = 493/625 (78%), Gaps = 2/625 (0%)
Query: 1 MDRRSIWALPVLVFLLFPVVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCS 60
MDR IW L LV LL PV SE E+EV R+L+QFM +S GNA R NWGWN +SDPC+
Sbjct: 1 MDRIPIWVLSGLVLLLLPVGNSE-EDEVNRSLIQFMTNISPGNAGRGSNWGWNMNSDPCT 59
Query: 61 GKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISN 120
KW GVTCDS+ K VRK++LDG NL GILD S+CK ++L VLSL N++ G +S+ IS+
Sbjct: 60 DKWEGVTCDSQSKFVRKVILDGLNLDGILDAKSLCKVKTLAVLSLNNNSVVGKLSEGISS 119
Query: 121 CKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQ 180
CK+LTHLY N SG LP SLS+L+NLKRL ISNNNFS LPDL RISGL++F A+NNQ
Sbjct: 120 CKRLTHLYASGNHFSGELPQSLSRLSNLKRLHISNNNFSGVLPDLPRISGLISFLAQNNQ 179
Query: 181 LRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNACPPTPPP 240
L G IP+FDFSNL QFNVSNNN SGP+P V+GR A SFSGNPGLCG PL N CPP+ P
Sbjct: 180 LSGEIPKFDFSNLQQFNVSNNNFSGPIPDVDGRFSASSFSGNPGLCGPPLSNTCPPSLPS 239
Query: 241 IKESKGSSTNQVFLFSGYILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVALDINSNKR 300
SKG S+ Q+ +SGYI+LGL I+L + KL K + K EK +VIKK V+++ +SNK
Sbjct: 240 KNGSKGFSSKQLLTYSGYIILGLIIVLFLFYKLFRKKRPKGEKVEVIKKGVSMESSSNKP 299
Query: 301 SSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHG 360
SS+SS + DNRSEYSITS ++G SSSL VL+S +N L+FEDLLRAPAEL+GRGKHG
Sbjct: 300 SSVSSQLKTSDNRSEYSITSAEAGMTSSSLTVLSSPVINGLRFEDLLRAPAELIGRGKHG 359
Query: 361 SLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVY 420
SLY+VVL++ ++LAVKR++DW ISS+DFK RMQKID VKHPNVLPPLA+YCSKQEKLLVY
Sbjct: 360 SLYKVVLENKMVLAVKRIKDWGISSQDFKRRMQKIDQVKHPNVLPPLAFYCSKQEKLLVY 419
Query: 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNIL 480
EYQ NGSLF LL+G++NG+ F+WGSRL VAA +A+ALA ++ EL +DGIAHGNLKS NIL
Sbjct: 420 EYQQNGSLFKLLYGTQNGEVFEWGSRLGVAASIAEALAFMYSELHDDGIAHGNLKSTNIL 479
Query: 481 FNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMC-STIKADVYGFGVILLELL 539
+M+PCISEYGL+V E+ DQ FLAQ +LK N S ST K DVYGFGVILLELL
Sbjct: 480 LGKDMDPCISEYGLMVVEDQDQQFLAQAENLKSNGPSGYTAYSTFKVDVYGFGVILLELL 539
Query: 540 TGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNE 599
TGKLVQN+GF+LA WVHSV+REEWT EVFD+ LI E ASEERM+ LLQVAL+CIN SP E
Sbjct: 540 TGKLVQNSGFDLARWVHSVLREEWTAEVFDKALILEGASEERMVNLLQVALKCINPSPGE 599
Query: 600 RPSMNQVAVMINNIKEEEERSISSE 624
RP++NQVA MIN IKEEEERSI +
Sbjct: 600 RPTINQVAGMINTIKEEEERSIQKD 624
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224133488|ref|XP_002321580.1| predicted protein [Populus trichocarpa] gi|222868576|gb|EEF05707.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/632 (63%), Positives = 484/632 (76%), Gaps = 14/632 (2%)
Query: 1 MDRRSIWALPVLVFLLFPVVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCS 60
MDR IW LP+L+F + P SE +E V ALVQFMEKLS GN+ NWGW+R+SDPC
Sbjct: 1 MDRILIWMLPILMFFILPKSNSE-DENVIEALVQFMEKLSAGNSQNYQNWGWDRNSDPCV 59
Query: 61 G------KWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTV 114
G W GV C Q +V+KIVLD FNL+G + VC + LV LSL+ENNI+G +
Sbjct: 60 GNVNFVGTWKGVDCKKSQ-NVKKIVLDNFNLTGTFEAAFVCTAKFLVFLSLKENNISGFM 118
Query: 115 SQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP-DLSRISGLLT 173
+EI NC +L HLYV N+ +G++PD+ +L LK +DIS+NNFS ELP D+SRISGLLT
Sbjct: 119 PKEIGNCGRLRHLYVKGNRFAGDIPDTFPQLRKLKSIDISDNNFSGELPADMSRISGLLT 178
Query: 174 FFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNA 233
FFAENNQL G IP+FDFS L FNV+NNN SGP+P V G+ GADSFSGNP LCGKPL A
Sbjct: 179 FFAENNQLSGEIPDFDFSYLKDFNVANNNFSGPIPDVKGKFGADSFSGNPELCGKPLSKA 238
Query: 234 CPPTPPPIKESKGSSTNQVFLFSGYILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVAL 293
CPP+ K SK SST++ ++SGYI+L + +LLL+ L L KNK KEE V+KK
Sbjct: 239 CPPSK---KGSKHSSTDRFLIYSGYIILAVVVLLLLALYLFKKNKPKEETAKVVKKGRVA 295
Query: 294 DINSNKRSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAEL 353
+ S + SS S + G NRSEYSI SV++G SSSLVVL S VN LKFEDLLRAPAEL
Sbjct: 296 NA-SKEHSSTPSESKTGGNRSEYSIASVEAGMTSSSLVVLPSPVVNGLKFEDLLRAPAEL 354
Query: 354 LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK 413
LGRGKHGSLY+V+ D+ +LAVKR++DW IS+ DFK RM+ ID V+HP VLPP+A+YCSK
Sbjct: 355 LGRGKHGSLYKVMFDNATILAVKRIKDWDISAADFKRRMEMIDQVRHPRVLPPVAFYCSK 414
Query: 414 QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGN 473
QEKLLVYEYQ NGSLF LLHGS+NG+ FDWGSRL VAA +A++LA +HE+L+E GIAHGN
Sbjct: 415 QEKLLVYEYQQNGSLFKLLHGSQNGRVFDWGSRLNVAASIAESLAFMHEQLQEGGIAHGN 474
Query: 474 LKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDI-SNQMCSTIKADVYGFG 532
LKS NILFN NMEPCISEYGLIV + DQSFL+Q+ S K N + + ST K DVYGFG
Sbjct: 475 LKSTNILFNKNMEPCISEYGLIVAQGQDQSFLSQSDSFKSNALGGDGAYSTFKVDVYGFG 534
Query: 533 VILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRC 592
V+LLELLTGKLV+NNGF+LA+WVHSVVREEWT EVFD LIAE ASEERM+ LLQVAL+C
Sbjct: 535 VVLLELLTGKLVENNGFDLASWVHSVVREEWTAEVFDRALIAEGASEERMVNLLQVALKC 594
Query: 593 INQSPNERPSMNQVAVMINNIKEEEERSISSE 624
IN SPNERP++NQ++ MIN IKE+EERSI SE
Sbjct: 595 INPSPNERPAINQISAMINTIKEDEERSIISE 626
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224119278|ref|XP_002318031.1| predicted protein [Populus trichocarpa] gi|222858704|gb|EEE96251.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/626 (64%), Positives = 492/626 (78%), Gaps = 5/626 (0%)
Query: 1 MDRRSIWALPVLVFLLFPVVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCS 60
MDR IW LP+L+FL+ P SE +E VK AL+QFMEKLS G+ D NWGW+ +SDPC+
Sbjct: 1 MDRILIWVLPILIFLVLPKSNSE-DENVKTALLQFMEKLSAGHEQNDQNWGWDINSDPCN 59
Query: 61 GKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISN 120
W GV C Q +V++IVL+ FNL+GILD SVC +SL+VLSL+ENNI+G + EI N
Sbjct: 60 STWKGVDCLGSQ-NVKRIVLNKFNLTGILDAASVCTAKSLLVLSLKENNISGFIPDEIGN 118
Query: 121 CKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQ 180
CK+L+HLYVG N+ +G++PD++S+L NLKRLDISNNNFS LPD+SR+SGLLTFFAENNQ
Sbjct: 119 CKRLSHLYVGGNRFTGDIPDTISQLINLKRLDISNNNFSGALPDMSRVSGLLTFFAENNQ 178
Query: 181 LRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNACPPTPPP 240
L G IP+FDFS + +F+V+NNN SGP+P V + GADSF+GNP LCG L ACPP+PPP
Sbjct: 179 LGGAIPDFDFSYIKEFSVANNNFSGPIPDVKSKFGADSFTGNPELCGTLLSKACPPSPPP 238
Query: 241 IKESKG-SSTNQVFLFSGYILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVALDINSNK 299
K+ SS ++ +FSGYILL + +LLL L L KNK K E T + K+ + S +
Sbjct: 239 SKKGSKHSSADRFLIFSGYILLAVVVLLLFALYLFKKNKSKGE-TVKVVKKGKVATASKE 297
Query: 300 RSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKH 359
S SS + G NRSEYSITSV++G SSSLVVL S V LKF+DLLRAPAELLGRGKH
Sbjct: 298 PSRTSSESKTGGNRSEYSITSVEAGTTSSSLVVLPSPVVKDLKFDDLLRAPAELLGRGKH 357
Query: 360 GSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLV 419
GSLY+V+LD+ +LA+KR++D IS+EDFK+R+Q+ID VKHP VLPP+A+YCSKQEKLLV
Sbjct: 358 GSLYKVMLDNATILALKRIKDSGISAEDFKSRIQRIDQVKHPRVLPPVAFYCSKQEKLLV 417
Query: 420 YEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNI 479
YEYQ NGSLF LLHGS+NGQ FDWGSRL VAA +A++LA +HE+L+E GIAHGNLKS NI
Sbjct: 418 YEYQQNGSLFKLLHGSQNGQVFDWGSRLNVAASIAESLAYMHEQLQEGGIAHGNLKSTNI 477
Query: 480 LFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDIS-NQMCSTIKADVYGFGVILLEL 538
LFNN MEPCISEYGLIV + DQSFL+Q+ S K + + N ST K DVYGFGV+LLEL
Sbjct: 478 LFNNKMEPCISEYGLIVVQGQDQSFLSQSDSFKTDALGRNVAYSTFKLDVYGFGVVLLEL 537
Query: 539 LTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPN 598
LTGKLVQNNGF+LA+WVHSVVREEWT EVFD LI E A EERML LLQVAL+CIN SPN
Sbjct: 538 LTGKLVQNNGFDLASWVHSVVREEWTAEVFDRALILEGAGEERMLNLLQVALKCINPSPN 597
Query: 599 ERPSMNQVAVMINNIKEEEERSISSE 624
ERPS +Q++ MIN IKE+EERSI S+
Sbjct: 598 ERPSTSQISAMINTIKEDEERSIISD 623
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255540739|ref|XP_002511434.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223550549|gb|EEF52036.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/594 (64%), Positives = 460/594 (77%), Gaps = 8/594 (1%)
Query: 36 MEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVC 95
MEKLS GN D WGW+ +SDPC WVGV CDS+ +V+KI+LD FN +G D +SVC
Sbjct: 1 MEKLSGGNMPNDQIWGWDNNSDPCRDTWVGVNCDSKSLAVKKIILDEFNFTGTFDASSVC 60
Query: 96 KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISN 155
+SL+VLSL NNI+G + +EI NCK LTHLY+ NKLSG++PDSLS+L+NLKRL+ISN
Sbjct: 61 TAKSLIVLSLNRNNISGLIPEEIRNCKHLTHLYLSGNKLSGDIPDSLSQLSNLKRLEISN 120
Query: 156 NNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLG 215
NN S ++ LSRISGL++F AENNQL GGIPEFDFSNL +FNV+NNN GP+P V G+
Sbjct: 121 NNLSGQVSGLSRISGLISFLAENNQLSGGIPEFDFSNLQEFNVANNNFIGPIPDVKGKFT 180
Query: 216 ADSFSGNPGLCGKPLPNACPPTPPPIKE--SKGSSTNQVFLFSGYILLGLFILLLVVLKL 273
D FSGNPGLC KPL NACPP PP E SK SS N ++SGYI+L L ILLL+ LK
Sbjct: 181 IDKFSGNPGLCRKPLLNACPPLAPPPPETKSKHSSKNGFLIYSGYIILALVILLLIALKF 240
Query: 274 VSKNKQKEEKTDVIKKEVALDINSNKRSSISSVHRAGDN---RSEYSITSVDSGAASSSL 330
+S K KE K D + VA D + +++ AG+ RSEYSITS ++G SS+L
Sbjct: 241 ISNRKSKEAKIDPM---VATDTGNKTNATLGESRTAGNRAEYRSEYSITSAENGMPSSAL 297
Query: 331 VVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKN 390
VVLTSS V +LKFEDLLRAPAELLG+GKHGSLY+V+L+D ++L VKR++ ISSEDFK
Sbjct: 298 VVLTSSLVKELKFEDLLRAPAELLGKGKHGSLYKVLLNDEIILIVKRIKYLGISSEDFKK 357
Query: 391 RMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVA 450
R+Q+I VKHP L P+A+YCSK+EKLLVYE+Q NGSLF LLHGS+NGQ FDWGSRL VA
Sbjct: 358 RIQRIQQVKHPRFLSPVAFYCSKEEKLLVYEFQQNGSLFKLLHGSQNGQVFDWGSRLNVA 417
Query: 451 ACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS 510
+A+ LA IH+E EDGIAHGNLKS NILFN NMEPCISEYGL+V EN DQS L++T S
Sbjct: 418 TIIAETLAFIHQEFWEDGIAHGNLKSTNILFNENMEPCISEYGLMVVENQDQSLLSKTDS 477
Query: 511 LKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570
K N S+++ ST K DVY FGVILLELLTGKLV+NNGF+LA WVHSVV EEWTVEVFD
Sbjct: 478 YKQNAPSSRLYSTFKVDVYAFGVILLELLTGKLVENNGFDLAKWVHSVVSEEWTVEVFDR 537
Query: 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSISSE 624
LI+E ASEERM+ LLQVAL+CIN SPNERP++ Q+ +MIN+IKE+EERSI SE
Sbjct: 538 ALISEGASEERMVNLLQVALKCINPSPNERPTITQIVMMINSIKEDEERSIISE 591
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356518991|ref|XP_003528158.1| PREDICTED: probable inactive receptor kinase At2g26730-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/592 (56%), Positives = 445/592 (75%), Gaps = 11/592 (1%)
Query: 36 MEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVC 95
M+KL+ GN RDP WGWN +SDPC KW GV C S K V+ ++L+ FN G++D +SVC
Sbjct: 1 MDKLAPGNVPRDPMWGWNLNSDPCIDKWHGVKCYSDNKYVKSVILEKFNFGGVVDASSVC 60
Query: 96 KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISN 155
+SL +L L +N + ++S++I NC+ LT L++ N+LSG+LP S+ KL+N+KRL +S+
Sbjct: 61 IAKSLRILRLTDNILHDSISEDIGNCQSLTQLFLSGNQLSGDLPISIGKLSNMKRLHVSD 120
Query: 156 NNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLG 215
N+F+ ELP++ +SGL++FFA+NN G IP FDFSNL FNVSNNNL G VP V G+
Sbjct: 121 NHFTGELPNMVHVSGLISFFAQNNNFTGEIPSFDFSNLDAFNVSNNNLQGQVPDVKGKFH 180
Query: 216 ADSFSGNPGLCGKPLPNACPPTPPPIKESKGSSTNQVFLFSGYILLGLFILLLVVLKLVS 275
DSFSGNP LCGKPL CPP P K+ + S N + ++SGY++LGL +LL + KL+S
Sbjct: 181 EDSFSGNPNLCGKPLSQECPP---PEKKDQNSFPNDLSIYSGYLVLGLIVLLFLTFKLLS 237
Query: 276 KNKQKEEKTDVIKKEVALDINS--NKRSSISS--VHRAGDN-RSEYSITSVDSGAASSSL 330
K K KE+ DV KKE+A + S K S IS+ V + G RSE S+TS++SG +S L
Sbjct: 238 KLKIKEKALDVEKKEMAEETVSVAGKASEISNSIVSKNGTVIRSECSLTSLESGMTTSGL 297
Query: 331 VVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKN 390
V+L+S + L+FEDLL APAEL+ RGKHGSLY+V+LD+G++LAVKR++DW IS +DF+
Sbjct: 298 VLLSSRTLRGLQFEDLLGAPAELIRRGKHGSLYKVMLDNGVLLAVKRIKDWGISKQDFER 357
Query: 391 RMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVA 450
RM I KHP VLPP+AYYCS+QEKLL YEY NGSLF L+GS++G SFDW SRL VA
Sbjct: 358 RMNLIAQAKHPRVLPPVAYYCSQQEKLLAYEYLQNGSLFMFLYGSQSGHSFDWRSRLNVA 417
Query: 451 ACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS 510
A +A+ALA +HEE E+GI HGNLKS+NILF+ NM+PCISEYGL++ EN DQ +
Sbjct: 418 ANIAEALAYMHEEFLENGIGHGNLKSSNILFDKNMDPCISEYGLMMAENQDQLVPSHNKG 477
Query: 511 LKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570
LK D+ + +T KADV+ FG+ILLELLTGK+++N+GF+L WV+SVVREEWTVEVFD+
Sbjct: 478 LKSKDL---IAATFKADVHAFGMILLELLTGKVIKNDGFDLVKWVNSVVREEWTVEVFDK 534
Query: 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSIS 622
LI++ +SEE+M+ LLQVAL+C+N SPN+RPSM+QVAVM N++ EEEE+SIS
Sbjct: 535 SLISQGSSEEKMMCLLQVALKCVNPSPNDRPSMSQVAVMTNSLIEEEEKSIS 586
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147860397|emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/633 (55%), Positives = 438/633 (69%), Gaps = 31/633 (4%)
Query: 1 MDRRSIWALPVLVFLLFPVVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCS 60
MD+ IW L + LLF S +E +V++AL+ F+ LS N GWN +DPC
Sbjct: 1 MDQVPIWVLFISFLLLFHTT-SSIEPDVRQALINFLGSLSGSNGQAAQAAGWNLDTDPCL 59
Query: 61 GKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVV----LSLEENNIAGTVSQ 116
W GVTCD + +SV+KI LDG +L+GILD S+C QSL LS+ N+I+G V +
Sbjct: 60 DGWNGVTCDKKNQSVQKISLDGLSLAGILDVGSLCTKQSLAASLNYLSVGNNSISGDVRK 119
Query: 117 EISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFA 176
EI++CKQL L + N+ SG LPDSL LNNLK+LDISNN+ S +LPDLSRISGL TF A
Sbjct: 120 EIADCKQLARLNISGNRFSGKLPDSLPMLNNLKKLDISNNHLSGDLPDLSRISGLTTFLA 179
Query: 177 ENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNACPP 236
+NNQL G +P+ DFSNL QF+VSNN GP+P V R SF GNPGLCG PLPN CP
Sbjct: 180 QNNQLTGKVPKLDFSNLEQFDVSNNLFRGPIPDVEDRFXESSFLGNPGLCGDPLPNKCP- 238
Query: 237 TPPPIKESKGSSTNQVFLFSGYILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVALDIN 296
K S + ++SGY L+ L +++ VV +L K + KEEK D K VA+D
Sbjct: 239 --------KKVSKEEFLMYSGYALIVLVLIMFVVFRLC-KRRTKEEKVDATNKIVAVD-- 287
Query: 297 SNKRSSISSVHRAGDNRSEYSITSVDSGA--ASSSLVVLTSSKVNKLKFEDLLRAPAELL 354
S ++ G +RS++S+ S D A +S+SLVVLTS VN LKFEDLL APAELL
Sbjct: 288 -------DSGYKTGLSRSDFSVISGDQSALVSSTSLVVLTSPVVNGLKFEDLLTAPAELL 340
Query: 355 GRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ 414
GRGKHGSLY+V+ D + L VKR++DW+ISS++FK RMQ+ID VKHPNVLP LA+YCSK
Sbjct: 341 GRGKHGSLYKVIFDKXMTLVVKRIKDWAISSDEFKKRMQRIDQVKHPNVLPALAFYCSKL 400
Query: 415 EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNL 474
EKLL+YEYQ NGSLF LL G Q W SRL +AA +A+ALA +H+EL DGIAHGNL
Sbjct: 401 EKLLIYEYQQNGSLFQLLSGD---QPLGWSSRLNLAATIAEALAFMHQELHSDGIAHGNL 457
Query: 475 KSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMC--STIKADVYGFG 532
KS+NIL N NM PCISEYGL ++ + L+ T+S + + + ST AD+Y FG
Sbjct: 458 KSSNILLNRNMVPCISEYGLREADSKELPSLSATNSRRAIEQTGATSSNSTFNADIYAFG 517
Query: 533 VILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRC 592
VILLELLTGKLVQN+ F+LA WVHS VREEWTVEVFD+ LI+ ASE RM+ LLQVA++C
Sbjct: 518 VILLELLTGKLVQNSEFDLARWVHSAVREEWTVEVFDKRLISHGASEARMVDLLQVAIKC 577
Query: 593 INQSPNERPSMNQVAVMINNIKEEEERSISSEA 625
+N+SP RP+M +VA MIN IKEEEERS+ EA
Sbjct: 578 VNRSPETRPTMRKVAYMINAIKEEEERSMVFEA 610
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359488856|ref|XP_002275088.2| PREDICTED: probable inactive receptor kinase At2g26730-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/632 (55%), Positives = 436/632 (68%), Gaps = 31/632 (4%)
Query: 1 MDRRSIWALPVLVFLLFPVVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCS 60
MD+ IW L + LLF S +E +V++AL+ F+ LS N GWN +DPC
Sbjct: 1 MDQVPIWVLFISFLLLFHTT-SSIEPDVRQALINFLGSLSGSNGQAAQAAGWNLDTDPCL 59
Query: 61 GKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVV----LSLEENNIAGTVSQ 116
W GVTCD + +SV+KI LDG +L+GILD S+C QSL LS+ N+I+G V +
Sbjct: 60 DGWNGVTCDKKNQSVQKISLDGLSLAGILDVGSLCTKQSLAASLNYLSVGNNSISGDVRK 119
Query: 117 EISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFA 176
EI++CKQL L + N+ SG LPDSL LNNLK+LDISNN+ S +LPDLSRISGL TF A
Sbjct: 120 EIADCKQLARLNISGNRFSGKLPDSLPMLNNLKKLDISNNHLSGDLPDLSRISGLTTFLA 179
Query: 177 ENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNACPP 236
+NNQL G +P+ DFSNL QF+VSNN GP+P V R SF GNPGLCG PLPN CP
Sbjct: 180 QNNQLTGKVPKLDFSNLEQFDVSNNLFRGPIPDVEDRFNESSFLGNPGLCGDPLPNKCP- 238
Query: 237 TPPPIKESKGSSTNQVFLFSGYILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVALDIN 296
K S + ++SGY L+ L +++ VV +L K + KEEK D K VA+D
Sbjct: 239 --------KKVSKEEFLMYSGYALIVLVLIMFVVFRLC-KRRTKEEKVDATNKIVAVD-- 287
Query: 297 SNKRSSISSVHRAGDNRSEYSITSVDSGA--ASSSLVVLTSSKVNKLKFEDLLRAPAELL 354
S ++ G +RS++S+ S D A +S+SLVVLTS VN LKFEDLL APAELL
Sbjct: 288 -------DSGYKTGLSRSDFSVISGDQSALVSSTSLVVLTSPVVNGLKFEDLLTAPAELL 340
Query: 355 GRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ 414
GRGKHGSLY+V+ D + L VKR++DW+ISS++FK RMQ+ID VKHPNVLP LA+YCSK
Sbjct: 341 GRGKHGSLYKVIFDKRMTLVVKRIKDWAISSDEFKKRMQRIDQVKHPNVLPALAFYCSKL 400
Query: 415 EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNL 474
EKLL+YEYQ NGSLF LL G Q W SRL +AA +A+ALA +H+EL DGIAHGNL
Sbjct: 401 EKLLIYEYQQNGSLFQLLSGD---QPLGWSSRLNLAATIAEALAFMHQELHSDGIAHGNL 457
Query: 475 KSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMC--STIKADVYGFG 532
KS+NIL N NM PCISEYGL ++ + L+ T+S + + + ST AD+Y FG
Sbjct: 458 KSSNILLNRNMVPCISEYGLREADSKELPSLSATNSRRAIEQTGATSSNSTFNADIYAFG 517
Query: 533 VILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRC 592
VILLELLTGKLVQN+ F+LA WVHS VREEWTVEVFD+ LI+ ASE RM+ LLQ A++C
Sbjct: 518 VILLELLTGKLVQNSEFDLARWVHSAVREEWTVEVFDKRLISHGASEARMVDLLQAAIKC 577
Query: 593 INQSPNERPSMNQVAVMINNIKEEEERSISSE 624
+N+SP RP+M +VA MIN IKEEEERS+ E
Sbjct: 578 VNRSPETRPTMRKVAYMINAIKEEEERSMVFE 609
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255552648|ref|XP_002517367.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223543378|gb|EEF44909.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/607 (54%), Positives = 427/607 (70%), Gaps = 22/607 (3%)
Query: 26 EEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSR-QKSVRKIVLDGFN 84
E VK +L++F+ KL+ NA DP++GWN ++DPC G W GV CD++ SVR+I L+ +
Sbjct: 74 EGVKASLIKFLAKLNGTNAQPDPSFGWNNATDPCQGGWKGVICDTQTNSSVRRIYLNQSS 133
Query: 85 LSGILDTTSVCK----TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPD 140
LSG+ D S+C SLV + L++NNI G + EI NCK L L + N+ SGNLPD
Sbjct: 134 LSGVFDAASLCNVPPLASSLVHIKLDQNNIGGQLPAEIVNCKNLNRLLIRHNQFSGNLPD 193
Query: 141 SLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSN 200
SL+ LNNLKRLDIS N+FS +P++SRISGL TF A+ N+L G IP FD +N FNVS
Sbjct: 194 SLAMLNNLKRLDISYNSFSGSMPNMSRISGLSTFLAQYNKLTGEIPNFDLTNFEMFNVSF 253
Query: 201 NNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNACPPTPPP--IKESKGSSTNQVFLFSGY 258
N+ +G +P GR SF GNPGLCG L C + G S + + ++SGY
Sbjct: 254 NDFTGAIPVKTGRFDQSSFMGNPGLCGPLLNRVCSLSSDDNIASHKDGVSKDDILMYSGY 313
Query: 259 ILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVALDINSNKRSSISSVHRAGDNRSEYSI 318
L+G L L++ K+ +NK K EK D I + ++D K +S+ ++ +RS
Sbjct: 314 GLVGFVFLGLIIYKVGKRNK-KNEKGDSINQVSSVDDGMEKPGEVSADYKIAASRS---- 368
Query: 319 TSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRL 378
+ +S S+SL+VLTS VN FEDLLRAPAEL+ RGKHGSLYRV+ ++GL+LAVKR+
Sbjct: 369 -AENSATVSTSLIVLTSPVVNGFSFEDLLRAPAELIERGKHGSLYRVICENGLILAVKRI 427
Query: 379 RDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENG 438
+ W+ISS +FK RMQKI V HPNVL PLA+YCSKQEKLLVYEYQ GSL LHG++ G
Sbjct: 428 KGWAISSNEFKQRMQKIYQVTHPNVLSPLAFYCSKQEKLLVYEYQQYGSLHKFLHGTQTG 487
Query: 439 QSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498
Q+F+W SRL VAA +A+ALA +H+ELR DGIAHGNLKS+N+LFN NMEPCISEYGL+V +
Sbjct: 488 QAFEWISRLNVAARIAEALAFMHQELRGDGIAHGNLKSSNVLFNKNMEPCISEYGLMVVD 547
Query: 499 NHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV 558
N+ S + + S + K DVYGFGVILLELLTGKLVQ NG +L TWVHSV
Sbjct: 548 NNQDSSSSSSFSSP---------NAFKEDVYGFGVILLELLTGKLVQTNGIDLTTWVHSV 598
Query: 559 VREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618
VREEWTVEVFD++LI+E ASEERM+ LLQVA++C+++SP RP+MNQVAVMIN IKEEE+
Sbjct: 599 VREEWTVEVFDKILISEGASEERMVNLLQVAIKCVHRSPENRPAMNQVAVMINTIKEEED 658
Query: 619 RSISSEA 625
+S++ E
Sbjct: 659 KSVTFEG 665
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356541594|ref|XP_003539259.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 332/613 (54%), Positives = 422/613 (68%), Gaps = 24/613 (3%)
Query: 24 VEEEVKRALVQFMEKLSVGNAARDPNWGWNR-SSDPCSGKWVGVTCDSRQKSVRKIVLDG 82
VE+EVKR L+QF+ ++S + ++ W + SSDPC W GV CD + S+++++LD
Sbjct: 5 VEDEVKRTLIQFLAQVSGNDGQQNSTLIWRQDSSDPCKDLWQGVYCDPQNMSIKRLLLDR 64
Query: 83 FNLSGILDTTSVCKTQ----SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNL 138
NLSG L +C Q SL LSL+ N I+G ++ EI NCKQLTHL++ NKL+G++
Sbjct: 65 LNLSGNLGVAMLCNLQPLAASLAFLSLDGNKISGVIASEIGNCKQLTHLHLSGNKLTGDI 124
Query: 139 PDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNV 198
P SL+ LNNLK LDISNN S LP+LSRISGL F A+NN LRG IP FDFSN QFNV
Sbjct: 125 PSSLAMLNNLKSLDISNNEISGPLPNLSRISGLNMFLAQNNHLRGTIPAFDFSNFDQFNV 184
Query: 199 SNNNLSGPVP-GVNGRLGADSFSGNPGLCGKPLPNACPPT------PPPIKESKGSSTNQ 251
S NN G +P V G ADSF GNP LCG PLP C +ESKG S Q
Sbjct: 185 SFNNFRGRIPKNVYGYFSADSFLGNPELCGDPLPKNCSDQFMFLSETQAKEESKGPSKQQ 244
Query: 252 VFLFSGYILLGLFILLLVVLKLVSKNKQKEEKTDVIKKEVALDINSNKRSSISSVHRAGD 311
+ ++SGY LG+ I+L VVLKL + K E + + I K S++SS ++
Sbjct: 245 ILMYSGYAALGVIIVLFVVLKLCRREKGIEALKNGVGATDGGGIE--KHSNVSSEYKDEV 302
Query: 312 NRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGL 371
+RSE+S+ S +S S SL+VL+ +LK EDLLRAPAEL+GRGK+GSLY+V+LD+G+
Sbjct: 303 SRSEFSVAS-ESRMVSQSLIVLSRPAAIELKLEDLLRAPAELIGRGKNGSLYKVILDNGI 361
Query: 372 MLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNL 431
M+ VKR++DW+ISS+DFK RMQ + K P+VL PLA+YCSKQEKLLVYEYQ NGSLF L
Sbjct: 362 MVVVKRIKDWTISSQDFKQRMQILSQAKDPHVLSPLAFYCSKQEKLLVYEYQQNGSLFKL 421
Query: 432 LHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISE 491
LHG+ ++FDW SRL +AA +A+AL+ +H+EL GI HGNLKS+NIL N NMEPCISE
Sbjct: 422 LHGTP--KTFDWTSRLGIAATIAEALSFMHQELGHHGIVHGNLKSSNILLNKNMEPCISE 479
Query: 492 YGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNL 551
YG++ ++ S A DI K DVYGFGVILLELLTGKLV+ NG +L
Sbjct: 480 YGVMGMDDQRGSLFASPIDAGALDI-------FKEDVYGFGVILLELLTGKLVKGNGIDL 532
Query: 552 ATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611
WV SVVREEWT EVFD+ LI+E ASEERM+ LLQVA+RC+N+SP RP MNQ+A+MIN
Sbjct: 533 TDWVQSVVREEWTGEVFDKSLISEYASEERMVNLLQVAIRCVNRSPQARPGMNQIALMIN 592
Query: 612 NIKEEEERSISSE 624
IKE+EE+S+ E
Sbjct: 593 TIKEDEEKSLIYE 605
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297733816|emb|CBI15063.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 300/478 (62%), Positives = 366/478 (76%), Gaps = 18/478 (3%)
Query: 36 MEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVC 95
M +S GNA R NWGWN +SDPC+ KW GVTCDS+ K VRK++LDG NL GILD S+C
Sbjct: 1 MTNISPGNAGRGSNWGWNMNSDPCTDKWEGVTCDSQSKFVRKVILDGLNLDGILDAKSLC 60
Query: 96 KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISN 155
K ++L VLSL N++ G +S+ IS+CK+LTHLY N SG LP SLS+L+NLKRL ISN
Sbjct: 61 KVKTLAVLSLNNNSVVGKLSEGISSCKRLTHLYASGNHFSGELPQSLSRLSNLKRLHISN 120
Query: 156 NNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLG 215
NNFS LPDL RISGL++F A+NNQL G IP+FDFSNL QFNVSNNN SGP+P V+GR
Sbjct: 121 NNFSGVLPDLPRISGLISFLAQNNQLSGEIPKFDFSNLQQFNVSNNNFSGPIPDVDGRFS 180
Query: 216 ADSFSGNPGLCGKPLPNACPPTPPPIKESKGSSTNQVFLFSGYILLGLFILLLVVLKLVS 275
A SFSGNPGLCG PL N CPP+ P SKG S+ Q+ +SGYI+LGL I+L + KL
Sbjct: 181 ASSFSGNPGLCGPPLSNTCPPSLPSKNGSKGFSSKQLLTYSGYIILGLIIVLFLFYKLFR 240
Query: 276 KNKQKEEKTDVIKKEVALDINSNKRSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTS 335
K + K EK +VIKK V+++ +SNK SS+SS + DNRSEYSITS ++G SSSL VL+S
Sbjct: 241 KKRPKGEKVEVIKKGVSMESSSNKPSSVSSQLKTSDNRSEYSITSAEAGMTSSSLTVLSS 300
Query: 336 SKVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKI 395
+N L+FEDLLRAPAEL+GRGKHGSLY+VVL++ ++LAVKR++DW ISS+DFK RMQKI
Sbjct: 301 PVINGLRFEDLLRAPAELIGRGKHGSLYKVVLENKMVLAVKRIKDWGISSQDFKRRMQKI 360
Query: 396 DHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLH------------------GSEN 437
D VKHPNVLPPLA+YCSKQEKLLVYEYQ NGSLF LL+ G++N
Sbjct: 361 DQVKHPNVLPPLAFYCSKQEKLLVYEYQQNGSLFKLLYGNFISTMFIVEFHHSLLSGTQN 420
Query: 438 GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495
G+ F+WGSRL VAA +A+ALA ++ EL +DGIAHGNLKS NIL +M+PCISEYGL+
Sbjct: 421 GEVFEWGSRLGVAASIAEALAFMYSELHDDGIAHGNLKSTNILLGKDMDPCISEYGLM 478
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 626 | ||||||
| TAIR|locus:2043858 | 658 | AT2G26730 [Arabidopsis thalian | 0.421 | 0.401 | 0.415 | 1.2e-87 | |
| TAIR|locus:2202359 | 670 | AT1G68400 [Arabidopsis thalian | 0.436 | 0.407 | 0.395 | 2.5e-81 | |
| TAIR|locus:2128414 | 638 | AT4G23740 [Arabidopsis thalian | 0.429 | 0.421 | 0.397 | 7.5e-76 | |
| TAIR|locus:2198090 | 655 | RKL1 "receptor-like kinase 1" | 0.429 | 0.410 | 0.365 | 9.6e-76 | |
| TAIR|locus:2156784 | 640 | RUL1 "REDUCED IN LATERAL GROWT | 0.424 | 0.415 | 0.385 | 8.5e-75 | |
| TAIR|locus:2161308 | 654 | AT5G58300 [Arabidopsis thalian | 0.429 | 0.411 | 0.383 | 2.9e-74 | |
| TAIR|locus:2036499 | 652 | AT1G60630 [Arabidopsis thalian | 0.415 | 0.398 | 0.403 | 2.9e-74 | |
| TAIR|locus:2024517 | 587 | AT1G64210 [Arabidopsis thalian | 0.426 | 0.454 | 0.383 | 2.9e-74 | |
| TAIR|locus:2196464 | 663 | AT1G10850 [Arabidopsis thalian | 0.423 | 0.399 | 0.389 | 9.7e-72 | |
| TAIR|locus:2178712 | 614 | AT5G24100 [Arabidopsis thalian | 0.426 | 0.434 | 0.378 | 1.2e-71 |
| TAIR|locus:2043858 AT2G26730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 116/279 (41%), Positives = 172/279 (61%)
Query: 344 EDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV 403
EDLLRA AE+LG+G G+ Y+ VL++G + VKRL+D S ++F+ +M+ + +KHPNV
Sbjct: 347 EDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVMASKKEFETQMEVVGKIKHPNV 406
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSE-NGQS-FDWGSRLRVAACVAKALALIH 461
+P AYY SK EKLLV+++ P GSL LLHGS +G++ DW +R+R+A A+ LA +H
Sbjct: 407 IPLRAYYYSKDEKLLVFDFMPTGSLSALLHGSRGSGRTPLDWDNRMRIAITAARGLAHLH 466
Query: 462 EELREDGIAHGXXXXXXXXXXXXMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISNQ 519
+ + HG + C+S+YGL + + + + LA + ++ +
Sbjct: 467 VSAK---LVHGNIKASNILLHPNQDTCVSDYGLNQLFSNSSPPNRLAGYHAPEVLETRKV 523
Query: 520 MCSTIKADVYGFGVILLELLTGKL-----VQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574
T K+DVY FGV+LLELLTGK + G +L WV SVVREEWT EVFD L+
Sbjct: 524 ---TFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVLSVVREEWTAEVFDVELMR 580
Query: 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613
EE M++LLQ+A+ C++ P++RP M +V MI ++
Sbjct: 581 YHNIEEEMVQLLQIAMACVSTVPDQRPVMQEVLRMIEDV 619
|
|
| TAIR|locus:2202359 AT1G68400 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 498 (180.4 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 113/286 (39%), Positives = 178/286 (62%)
Query: 340 KLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDW-SISSE-DFKNRMQKIDH 397
+ + EDLLRA AE+LG+G G+ Y+ VL+DG +AVKRL+D +++ + +F+ +M+ +
Sbjct: 354 RFELEDLLRASAEMLGKGGFGTAYKAVLEDGNEVAVKRLKDAVTVAGKKEFEQQMEVLGR 413
Query: 398 VKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSEN-GQS-FDWGSRLRVAACVAK 455
++H N++ AYY +++EKLLVY+Y PNGSLF LLHG+ G++ DW +RL++AA A+
Sbjct: 414 LRHTNLVSLKAYYFAREEKLLVYDYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAR 473
Query: 456 ALALIHEELREDGIAHGXXXXXXXXXXXXMEPCISEYGLIVTENHDQSFLAQTSSLKIND 515
LA IH + + HG +S++GL + Q+ +A+++ + +
Sbjct: 474 GLAFIHGSCKTLKLTHGDIKSTNVLLDRSGNARVSDFGLSIFAP-SQT-VAKSNGYRAPE 531
Query: 516 ISNQMCSTIKADVYGFGVILLELLTGK---LVQ--NNG--FNLATWVHSVVREEWTVEVF 568
+ + T K+DVY FGV+LLE+LTGK +V+ ++G +L WV SVVREEWT EVF
Sbjct: 532 LIDGRKHTQKSDVYSFGVLLLEILTGKCPNMVETGHSGGAVDLPRWVQSVVREEWTAEVF 591
Query: 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614
D L+ EE M+ LLQ+A+ C + + RP M V +I +I+
Sbjct: 592 DLELMRYKDIEEEMVGLLQIAMACTAVAADHRPKMGHVVKLIEDIR 637
|
|
| TAIR|locus:2128414 AT4G23740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 518 (187.4 bits), Expect = 7.5e-76, Sum P(2) = 7.5e-76
Identities = 110/277 (39%), Positives = 167/277 (60%)
Query: 344 EDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV 403
EDLLRA AE+LG+G G+ Y+ VL+D +AVKRL+D + DF+ +M+ I +KH NV
Sbjct: 333 EDLLRASAEVLGKGTFGTTYKAVLEDATSVAVKRLKDVAAGKRDFEQQMEIIGGIKHENV 392
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGS--ENGQSFDWGSRLRVAACVAKALALIH 461
+ AYY SK EKL+VY+Y GS+ +LLHG+ EN DW +R+++A AK +A IH
Sbjct: 393 VELKAYYYSKDEKLMVYDYFSRGSVASLLHGNRGENRIPLDWETRMKIAIGAAKGIARIH 452
Query: 462 EELREDGIAHGXXXXXXXXXXXXMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMC 521
+E + HG C+S+ GL + +++ + + ++++
Sbjct: 453 KE-NNGKLVHGNIKSSNIFLNSESNGCVSDLGLTAVMSPLAPPISRQAGYRAPEVTDTRK 511
Query: 522 STIKADVYGFGVILLELLTGK--LVQNNG---FNLATWVHSVVREEWTVEVFDEVLIAEA 576
S+ +DVY FGV+LLELLTGK + G +L WVHSVVREEWT EVFD L+
Sbjct: 512 SSQLSDVYSFGVVLLELLTGKSPIHTTAGDEIIHLVRWVHSVVREEWTAEVFDIELLRYT 571
Query: 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613
EE M+++LQ+A+ C+ ++ ++RP M+ + +I N+
Sbjct: 572 NIEEEMVEMLQIAMSCVVKAADQRPKMSDLVRLIENV 608
|
|
| TAIR|locus:2198090 RKL1 "receptor-like kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 474 (171.9 bits), Expect = 9.6e-76, Sum P(2) = 9.6e-76
Identities = 102/279 (36%), Positives = 164/279 (58%)
Query: 344 EDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV 403
EDLLRA AE+LG+G G+ Y+ VLD ++AVKRL+D ++ ++FK +++ + + H N+
Sbjct: 367 EDLLRASAEVLGKGTFGTAYKAVLDAVTVVAVKRLKDVMMADKEFKEKIELVGAMDHENL 426
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSEN-GQS-FDWGSRLRVAACVAKALALIH 461
+P AYY S+ EKLLVY++ P GSL LLHG+ G+S +W R R+A A+ L +H
Sbjct: 427 VPLRAYYFSRDEKLLVYDFMPMGSLSALLHGNRGAGRSPLNWDVRSRIAIGAARGLDYLH 486
Query: 462 EELREDGIAHGXXXXXXXXXXXXMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMC 521
+ +HG + +S++GL + + + + ++++
Sbjct: 487 SQ--GTSTSHGNIKSSNILLTKSHDAKVSDFGLAQLVGSSATNPNRATGYRAPEVTDPKR 544
Query: 522 STIKADVYGFGVILLELLTGKLVQNN-----GFNLATWVHSVVREEWTVEVFDEVLIAEA 576
+ K DVY FGV+LLEL+TGK N+ G +L WV SV R+EW EVFD L++ A
Sbjct: 545 VSQKGDVYSFGVVLLELITGKAPSNSVMNEEGVDLPRWVKSVARDEWRREVFDSELLSLA 604
Query: 577 ASEERML-KLLQVALRCINQSPNERPSMNQVAVMINNIK 614
EE M+ +++Q+ L C +Q P++RP M++V + N++
Sbjct: 605 TDEEEMMAEMVQLGLECTSQHPDQRPEMSEVVRKMENLR 643
|
|
| TAIR|locus:2156784 RUL1 "REDUCED IN LATERAL GROWTH1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 505 (182.8 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
Identities = 108/280 (38%), Positives = 166/280 (59%)
Query: 344 EDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPN 402
EDLL+A AE+LG+G G+ Y+ VL+D + VKRLR+ S ++F+ +M+ + + +H N
Sbjct: 343 EDLLKASAEVLGKGSFGTAYKAVLEDTTAVVVKRLREVVASKKEFEQQMEIVGKINQHSN 402
Query: 403 VLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHE 462
+P LAYY SK EKLLVY+Y GSLF ++HG+ + DW +R+++A +KA++ +H
Sbjct: 403 FVPLLAYYYSKDEKLLVYKYMTKGSLFGIMHGNRGDRGVDWETRMKIATGTSKAISYLHS 462
Query: 463 ELREDGIAHGXXXXXXXXXXXXMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS 522
L+ HG +EPC+S+ L+ N + +T ++
Sbjct: 463 -LK---FVHGDIKSSNILLTEDLEPCLSDTSLVTLFNLP-THTPRTIGYNAPEVIETRRV 517
Query: 523 TIKADVYGFGVILLELLTGK--LVQNN------GFNLATWVHSVVREEWTVEVFDEVLIA 574
+ ++DVY FGV++LE+LTGK L Q +L WV SVVREEWT EVFD L+
Sbjct: 518 SQRSDVYSFGVVILEMLTGKTPLTQPGLEDERVVIDLPRWVRSVVREEWTAEVFDVELLK 577
Query: 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614
EE M+++LQ+AL C+ ++P RP M +VA MI +++
Sbjct: 578 FQNIEEEMVQMLQLALACVARNPESRPKMEEVARMIEDVR 617
|
|
| TAIR|locus:2161308 AT5G58300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 476 (172.6 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 107/279 (38%), Positives = 162/279 (58%)
Query: 344 EDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPN 402
EDLLRA AE+LG+G +G+ Y+ VL++ + VKRL++ + +F+ +M+ I V HP+
Sbjct: 354 EDLLRASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVAAGKREFEQQMEIISRVGNHPS 413
Query: 403 VLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQS--FDWGSRLRVAACVAKALALI 460
V+P AYY SK EKL+V +Y P G+L +LLHG+ + DW SR+++ AK +A +
Sbjct: 414 VVPLRAYYYSKDEKLMVCDYYPAGNLSSLLHGNRGSEKTPLDWDSRVKITLSAAKGIAHL 473
Query: 461 HEELREDGIAHGXXXXXXXXXXXXMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQM 520
H +HG + CIS++GL + + + + + ++
Sbjct: 474 HAA-GGPKFSHGNIKSSNVIMKQESDACISDFGLTPLMAVPIAPM-RGAGYRAPEVMETR 531
Query: 521 CSTIKADVYGFGVILLELLTGKL-VQNNG----FNLATWVHSVVREEWTVEVFDEVLIAE 575
T K+DVY FGV++LE+LTGK VQ+ +L WV SVVREEWT EVFD L+
Sbjct: 532 KHTHKSDVYSFGVLILEMLTGKSPVQSPSRDDMVDLPRWVQSVVREEWTSEVFDIELMRF 591
Query: 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614
EE M+++LQ+A+ C+ Q P RP+M+ V MI I+
Sbjct: 592 QNIEEEMVQMLQIAMACVAQVPEVRPTMDDVVRMIEEIR 630
|
|
| TAIR|locus:2036499 AT1G60630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 472 (171.2 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 115/285 (40%), Positives = 169/285 (59%)
Query: 344 EDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSED-FKNRMQKIDHVKHPN 402
+DLL+A AE LGRG GS Y+ V++ G ++ VKRL+D D FK ++ + +KHPN
Sbjct: 346 DDLLKASAETLGRGTLGSTYKAVMESGFIITVKRLKDAGFPRMDEFKRHIEILGRLKHPN 405
Query: 403 VLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSE---NGQSFDWGSRLRVAACVAKALAL 459
++P AY+ +K+E LLVY+Y PNGSLF+L+HGS+ +G+ W S L++A +A L
Sbjct: 406 LVPLRAYFQAKEECLLVYDYFPNGSLFSLIHGSKVSGSGKPLHWTSCLKIAEDLAMGLVY 465
Query: 460 IHEELREDGIAHGXXXXXXXXXXXXMEPCISEYGLIVTENHDQSFLAQTS--SL--KIND 515
IH+ G+ HG E C+++YGL ++ HD + TS SL K +
Sbjct: 466 IHQN---PGLTHGNLKSSNVLLGPDFESCLTDYGL--SDLHDPYSIEDTSAASLFYKAPE 520
Query: 516 ISN-QMCSTIKADVYGFGVILLELLTGK-----LVQNNGFNLATWVHSVVREEWTVEVFD 569
+ + ST ADVY FGV+LLELLTG+ LV G +++TWV +V REE T EV +
Sbjct: 521 CRDLRKASTQPADVYSFGVLLLELLTGRTSFKDLVHKYGSDISTWVRAV-REEET-EVSE 578
Query: 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614
E+ ASEE++ LL +A C+ P RP+M +V M+ + +
Sbjct: 579 EL----NASEEKLQALLTIATACVAVKPENRPAMREVLKMVKDAR 619
|
|
| TAIR|locus:2024517 AT1G64210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 458 (166.3 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 109/284 (38%), Positives = 153/284 (53%)
Query: 344 EDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV 403
+DLL + AE+LG+G G+ Y+V ++D + VKRL++ + +F+ +M+ I ++H NV
Sbjct: 303 DDLLSSSAEVLGKGAFGTTYKVTMEDMSTVVVKRLKEVVVGRREFEQQMEIIGMIRHENV 362
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQS---FDWGSRLRVAACVAKALALI 460
AYY SK +KL VY Y +GSLF +LHG+ DW +RLR+A A+ LA I
Sbjct: 363 AELKAYYYSKDDKLAVYSYYNHGSLFEILHGNRGRYHRVPLDWDARLRIATGAARGLAKI 422
Query: 461 HEELREDGIAHGXXXXXXXXXXXXMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQM 520
HE HG CI + GL TS +I++
Sbjct: 423 HE----GKFIHGNIKSSNIFLDSQCYGCIGDVGLTTIMRSLPQTTCLTSGYHAPEITDTR 478
Query: 521 CSTIKADVYGFGVILLELLTGK-------LVQNNGFN--LATWVHSVVREEWTVEVFD-E 570
ST +DVY FGV+LLELLTGK LV G N LA+W+ SVV +EWT EVFD E
Sbjct: 479 RSTQFSDVYSFGVVLLELLTGKSPVSQAELVPTGGENMDLASWIRSVVAKEWTGEVFDME 538
Query: 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614
+L EE M+++LQ+ L C+ ERP + QV +I +I+
Sbjct: 539 ILSQSGGFEEEMVEMLQIGLACVALKQQERPHIAQVLKLIEDIR 582
|
|
| TAIR|locus:2196464 AT1G10850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 472 (171.2 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 111/285 (38%), Positives = 165/285 (57%)
Query: 344 EDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS-EDFKNRMQKIDHVKHPN 402
EDLL+A AE LGRG GS Y+ V++ G ++ VKRL++ E+FK ++ + +KHPN
Sbjct: 353 EDLLKASAETLGRGTLGSTYKAVMESGFIVTVKRLKNARYPRMEEFKRHVEILGQLKHPN 412
Query: 403 VLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHG---SENGQSFDWGSRLRVAACVAKALAL 459
++P AY+ +K+E+LLVY+Y PNGSLF L+HG S +G+ W S L++A +A AL
Sbjct: 413 LVPLRAYFQAKEERLLVYDYFPNGSLFTLIHGTRASGSGKPLHWTSCLKIAEDLASALLY 472
Query: 460 IHEELREDGIAHGXXXXXXXXXXXXMEPCISEYGLIVTENHDQSFLAQTSSL----KIND 515
IH+ G+ HG E C+++YGL HD + +TS++ K +
Sbjct: 473 IHQN---PGLTHGNLKSSNVLLGPDFESCLTDYGLSTL--HDPDSVEETSAVSLFYKAPE 527
Query: 516 ISN-QMCSTIKADVYGFGVILLELLTGK-----LVQNNGFNLATWVHSVVREEWTVEVFD 569
+ + ST ADVY FGV+LLELLTG+ LVQ G +++ WV +V REE T +
Sbjct: 528 CRDPRKASTQPADVYSFGVLLLELLTGRTPFQDLVQEYGSDISRWVRAV-REEETESGEE 586
Query: 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614
ASEE++ LL +A C+ P+ RP M +V M+ + +
Sbjct: 587 PTSSGNEASEEKLQALLSIATVCVTIQPDNRPVMREVLKMVRDAR 631
|
|
| TAIR|locus:2178712 AT5G24100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 470 (170.5 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 106/280 (37%), Positives = 164/280 (58%)
Query: 344 EDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV 403
EDLL A AE LG+G G Y+ VL+D ++AVKRL+D +S +DFK++M+ + ++KH NV
Sbjct: 337 EDLLIASAEFLGKGVFGMTYKAVLEDSKVIAVKRLKDIVVSRKDFKHQMEIVGNIKHENV 396
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHG--SENGQ-SFDWGSRLRVAACVAKALALI 460
P AY CSK+EKL+VY+Y NGSL LHG ++ G +W +RLR VAK L I
Sbjct: 397 APLRAYVCSKEEKLMVYDYDSNGSLSLRLHGKNADEGHVPLNWETRLRFMIGVAKGLGHI 456
Query: 461 HEELREDGIAHGXXXXXXXXXXXXMEPCISEYGL-IVTENHDQSFLAQTSSLKIN--DIS 517
H + +AHG CISE GL ++T ++ + S L+ +++
Sbjct: 457 HTQ----NLAHGNIKSSNVFMNSEGYGCISEAGLPLLTNPVVRADSSARSVLRYRAPEVT 512
Query: 518 NQMCSTIKADVYGFGVILLELLTGKLVQNN---GFNLATWVHSVVREEWTVEVFDEVLIA 574
+ ST ++D+Y FG+++LE LTG+ + ++ G +L WV+ V+ ++WT EVFD L+
Sbjct: 513 DTRRSTPESDIYSFGILMLETLTGRSIMDDRKEGIDLVVWVNDVISKQWTGEVFDLELVK 572
Query: 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614
E ++L++LQ+ C P +RP M +V + I+
Sbjct: 573 TPNVEAKLLQMLQLGTSCTAMVPAKRPDMVKVVETLEEIE 612
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O48788 | Y2267_ARATH | No assigned EC number | 0.3656 | 0.9408 | 0.8951 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 626 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 9e-32 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 8e-27 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 9e-26 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 4e-20 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 2e-15 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 4e-15 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 4e-15 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 4e-14 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-13 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 2e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-13 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 6e-13 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 6e-13 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 7e-13 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 9e-13 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 2e-12 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 7e-12 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-12 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-11 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 3e-11 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 7e-11 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 1e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-10 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 2e-10 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 3e-10 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 4e-10 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 4e-10 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 5e-10 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 5e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-09 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 1e-09 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-09 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 2e-09 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 4e-09 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 4e-09 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 6e-09 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 7e-09 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-08 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 2e-08 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 2e-08 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 2e-08 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 4e-08 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 4e-08 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 5e-08 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 6e-08 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 7e-08 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 8e-08 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 9e-08 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 1e-07 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 2e-07 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 2e-07 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 3e-07 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-07 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 8e-07 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 8e-07 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 9e-07 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 2e-06 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 4e-06 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 5e-06 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 6e-06 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 7e-06 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 1e-05 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-05 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 2e-05 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 2e-05 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 2e-05 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 3e-05 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-05 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 5e-05 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 5e-05 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 6e-05 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 8e-05 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 8e-05 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 9e-05 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 9e-05 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 1e-04 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 1e-04 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 2e-04 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 3e-04 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 4e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 4e-04 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 4e-04 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 5e-04 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 5e-04 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 5e-04 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 7e-04 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 8e-04 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 8e-04 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 9e-04 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.001 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 0.001 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 0.002 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 0.002 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 0.002 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 0.002 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 0.002 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 0.002 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 0.003 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 0.003 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 0.004 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 9e-32
Identities = 136/529 (25%), Positives = 225/529 (42%), Gaps = 89/529 (16%)
Query: 103 LSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSEL 162
L L N +G V +++ + +L L + NKLSG +PD LS L LD+S+N S ++
Sbjct: 480 LDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQI 539
Query: 163 PD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRLG--AD 217
P S + L NQL G IP+ + +L+Q N+S+N+L G +P L A
Sbjct: 540 PASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINAS 599
Query: 218 SFSGNPGLCGKPLPNACPPTPPPIKESKGSSTNQVFLFSGYILLGLFILLLVVLKLVSKN 277
+ +GN LCG + PP K + F LG F++L +V
Sbjct: 600 AVAGNIDLCGGDTTSGLPPCKRVRK-------TPSWWFYITCTLGAFLVLALV------- 645
Query: 278 KQKEEKTDVIKKEVALDINSNKRSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSK 337
A + + + R + + + DS + S +
Sbjct: 646 --------------AFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITI------ 685
Query: 338 VNKLKFEDLLRAPAE--LLGRGKHGSLYR-VVLDDGLMLAVKRLRDWSISSEDFKNRMQK 394
D+L + E ++ RGK G+ Y+ + +G+ VK + D + M K
Sbjct: 686 ------NDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGK 739
Query: 395 IDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVA 454
+ H PN++ + S++ L++EY +L +L W R ++A +A
Sbjct: 740 LQH---PNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIA 790
Query: 455 KALALIHEELREDGIAHGNLKSNNILFNNNMEP--CISEYGLIVTENH---DQSFLA-QT 508
KAL +H + GNL I+ + EP +S GL+ T+ +++A +T
Sbjct: 791 KALRFLHCRCSPAVVV-GNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPET 849
Query: 509 SSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH-SVVREEWTVEV 567
K DI T K+D+YGFG+IL+ELLTGK + + VH S+V EW
Sbjct: 850 RETK--DI------TEKSDIYGFGLILIELLTGK----SPADAEFGVHGSIV--EWARYC 895
Query: 568 F---------DEVLIAEAASEER-MLKLLQVALRCINQSPNERPSMNQV 606
+ D + + + + +++++ +AL C P RP N V
Sbjct: 896 YSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDV 944
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 8e-27
Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 64/264 (24%)
Query: 354 LGRGKHGSLYRVV-LDDGLMLAVKRLR--DWSISSEDFKNRMQKIDHVKHPNVLPPLAYY 410
LG G G++Y G +A+K ++ D S E+ ++ + + HPN++ +
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 411 CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470
+ LV EY GSL +LL EN LR+ + + L +H GI
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLK--ENEGKLSEDEILRILLQILEGLEYLHSN----GII 114
Query: 471 HGNLKSNNILFNN-NMEPCISEYGLIVTENHDQSFLAQTSSLKIND-------ISNQMCS 522
H +LK NIL ++ N + ++++GL D+S L ++ + +
Sbjct: 115 HRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLL---KTIVGTPAYMAPEVLLGKGYY 171
Query: 523 TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582
+ K+D++ GVIL EL +
Sbjct: 172 SEKSDIWSLGVILYEL-----------------------------------------PEL 190
Query: 583 LKLLQVALRCINQSPNERPSMNQV 606
L++ + + + P +RPS ++
Sbjct: 191 KDLIR---KMLQKDPEKRPSAKEI 211
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 9e-26
Identities = 65/280 (23%), Positives = 107/280 (38%), Gaps = 55/280 (19%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
LG G G++Y+ G ++AVK L+ S S+ + ++I + HPN++ +
Sbjct: 5 RKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLI 64
Query: 408 AYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED 467
+ K LV EY G LF+ L G ++A + + L +H
Sbjct: 65 DAFEDKDHLYLVMEYCEGGDLFDYL---SRGGPLSEDEAKKIALQILRGLEYLHSN---- 117
Query: 468 GIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTI--- 524
GI H +LK NIL + N I+++GL S L T
Sbjct: 118 GIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSL------------TTFVGTPWYM 165
Query: 525 -------------KADVYGFGVILLELLTGKL-----VQNNGFNLATWVHSVVREEWTVE 566
K DV+ GVIL ELLTGK + L + ++ +
Sbjct: 166 APEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQL---IRRILGPPLEFD 222
Query: 567 VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
+E A + +C+N+ P++RP+ ++
Sbjct: 223 EPKWSSGSEEA--------KDLIKKCLNKDPSKRPTAEEI 254
|
Length = 260 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 89.9 bits (224), Expect = 4e-20
Identities = 57/274 (20%), Positives = 101/274 (36%), Gaps = 49/274 (17%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
E LG G G +Y G ++A+K ++ I +D + +++I +KHPN++
Sbjct: 5 EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIK-KDRERILREIKILKKLKHPNIVRLY 63
Query: 408 AYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED 467
+ + + LV EY G LF+LL + AL +H +
Sbjct: 64 DVFEDEDKLYLVMEYCEGGDLFDLLK---KRGRLSEDEARFYLRQILSALEYLHSK---- 116
Query: 468 GIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTI--- 524
GI H +LK NIL + + ++++GL L + T
Sbjct: 117 GIVHRDLKPENILLDEDGHVKLADFGL-------------ARQLDPGEKLTTFVGTPEYM 163
Query: 525 ------------KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572
D++ GVIL ELLTGK L + + + + +
Sbjct: 164 APEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDI 223
Query: 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
S E L++ + + + P +R + +
Sbjct: 224 -----SPE-AKDLIR---KLLVKDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 2e-15
Identities = 60/275 (21%), Positives = 111/275 (40%), Gaps = 46/275 (16%)
Query: 352 ELLGRGKHGSLYRVVLDDGLML-----AVKRLRDWSISS--EDFKNRMQKIDHVKHPNVL 404
+ LG G G +Y+ L AVK L++ + E+F + + + HPNV+
Sbjct: 5 KKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVV 64
Query: 405 PPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
L C+++E L +V EY G L + L +N L A +A+ + + +
Sbjct: 65 K-LLGVCTEEEPLYIVMEYMEGGDLLSYLR--KNRPKLSLSDLLSFALQIARGMEYLESK 121
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN-----DISN 518
H +L + N L N+ IS++GL D + + L I +
Sbjct: 122 ----NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKE 177
Query: 519 QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578
++ K+DV+ FGV+L E+ T G + +E ++ +
Sbjct: 178 GKFTS-KSDVWSFGVLLWEIFTLGEQPYPGMS------------------NEEVLEYLKN 218
Query: 579 EERMLK-------LLQVALRCINQSPNERPSMNQV 606
R+ + L + L+C + P +RP+ +++
Sbjct: 219 GYRLPQPPNCPPELYDLMLQCWAEDPEDRPTFSEL 253
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 75.3 bits (186), Expect = 4e-15
Identities = 59/275 (21%), Positives = 111/275 (40%), Gaps = 45/275 (16%)
Query: 352 ELLGRGKHGSLYRVVLDDGLML-----AVKRLRDWSISS--EDFKNRMQKIDHVKHPNVL 404
+ LG G G +Y+ L AVK L++ + E+F + + + HPN++
Sbjct: 5 KKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIV 64
Query: 405 PPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
L C+++E L +V EY P G L + L + + L A +A+ + + +
Sbjct: 65 K-LLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESK 122
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN-----DISN 518
H +L + N L N+ IS++GL D + + L I +
Sbjct: 123 ----NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKE 178
Query: 519 QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578
++ K+DV+ FGV+L E+ T G + + ++
Sbjct: 179 GKFTS-KSDVWSFGVLLWEIFTLGEEPYPGMS------------------NAEVLEYLKK 219
Query: 579 EERMLK-------LLQVALRCINQSPNERPSMNQV 606
R+ K L ++ L+C + P +RP+ +++
Sbjct: 220 GYRLPKPPNCPPELYKLMLQCWAEDPEDRPTFSEL 254
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 4e-15
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 24/203 (11%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
+L+GRG G +Y+ + L+ G +A+K++ I E K+ MQ+ID ++KHPN++ +
Sbjct: 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYI 65
Query: 408 AYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAAC----VAKALALIHEE 463
+ ++ EY NGSL ++ + A V + LA +HE+
Sbjct: 66 GSIETSDSLYIILEYAENGSLRQIIKKFGPFPE-------SLVAVYVYQVLQGLAYLHEQ 118
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSS--LKINDISNQ 519
G+ H ++K+ NIL + ++++G+ + + + + I
Sbjct: 119 ----GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMS 174
Query: 520 MCSTIKADVYGFGVILLELLTGK 542
ST +D++ G ++ELLTG
Sbjct: 175 GAST-ASDIWSLGCTVIELLTGN 196
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 72.5 bits (179), Expect = 4e-14
Identities = 60/287 (20%), Positives = 113/287 (39%), Gaps = 61/287 (21%)
Query: 352 ELLGRG-----KHGSLYRVVLDDGLMLAVKRLRDWSISS--EDFKNRMQKIDHVKHPNVL 404
+ LG G G+L +AVK L++ + E+F + + HPN++
Sbjct: 5 KKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIV 64
Query: 405 PPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
L C++ E L +V EY P G L + L ++G+ L++A +AK + + +
Sbjct: 65 RLLGV-CTQGEPLYIVTEYMPGGDLLDFLR--KHGEKLTLKDLLQMALQIAKGMEYLESK 121
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGL-IVTENHDQSFLAQTSSLKIN-------D 515
H +L + N L N+ IS++GL D + K+
Sbjct: 122 ----NFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYY--RKRGGGKLPIKWMAPES 175
Query: 516 ISNQMCSTIKADVYGFGVILLELLTG-----KLVQNNGFNLATWVHSVVREEWTVEVFDE 570
+ + ++ K+DV+ FGV+L E+ T + N EV +
Sbjct: 176 LKDGKFTS-KSDVWSFGVLLWEIFTLGEQPYPGMSNE------------------EVLEL 216
Query: 571 VLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMI 610
+ R+ + L ++ L+C P +RP+ +++ +
Sbjct: 217 L-----EDGYRLPRPENCPDELYELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 1e-13
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152
S+ SL L+L N + G + +E+ K L +Y+G N LSG +P + L +L LD
Sbjct: 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLD 242
Query: 153 ISNNNFSSELP-DLSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNNLSGPVP 208
+ NN + +P L + L F N+L G IP F L+ ++S+N+LSG +P
Sbjct: 243 LVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIP 301
|
Length = 968 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 69.9 bits (172), Expect = 2e-13
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 51/223 (22%)
Query: 342 KFEDLLRAPAELLGRGKHGSLYRV-VLDDGLMLAVKRLRDWSISSEDFKNRMQKID---H 397
FE L E +G+G G +Y+ G +A+K ++ S E + + +I
Sbjct: 1 LFEIL-----EKIGKGGFGEVYKARHKRTGKEVAIKVIKL--ESKEKKEKIINEIQILKK 53
Query: 398 VKHPNVLPPLAYYCSKQEKL---LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVA 454
KHPN++ YY S +K +V E+ GSL +LL + Q+ A V
Sbjct: 54 CKHPNIV---KYYGSYLKKDELWIVMEFCSGGSLKDLLKST--NQTLT----ESQIAYVC 104
Query: 455 KAL--ALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLK 512
K L L + L +GI H ++K+ NIL ++ E + ++GL AQ S K
Sbjct: 105 KELLKGLEY--LHSNGIIHRDIKAANILLTSDGEVKLIDFGLS----------AQLSDTK 152
Query: 513 IND-------------ISNQMCSTIKADVYGFGVILLELLTGK 542
+ I+ + KAD++ G+ +EL GK
Sbjct: 153 ARNTMVGTPYWMAPEVINGKPYDY-KADIWSLGITAIELAEGK 194
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 3e-13
Identities = 58/235 (24%), Positives = 91/235 (38%), Gaps = 59/235 (25%)
Query: 13 VFLLFPVVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGK---WVGVTCD 69
VF + + EEV AL K S+G R +GWN DPC + W G C
Sbjct: 359 VFEIITAESKTLLEEV-SALQTL--KSSLGLPLR---FGWN--GDPCVPQQHPWSGADC- 409
Query: 70 SRQKSVRKIVLDGFNLS-----GILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQL 124
+ K +DG L G + + K + L ++L N+I G + + + L
Sbjct: 410 QFDSTKGKWFIDGLGLDNQGLRGFIPND-ISKLRHLQSINLSGNSIRGNIPPSLGSITSL 468
Query: 125 THLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGG 184
L + N +G++P+SL +L +L+ L+++ N+ S +P + + G L L
Sbjct: 469 EVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP--AALGGRL--------LHRA 518
Query: 185 IPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNACPPTPP 239
FN ++ N GLCG P AC P
Sbjct: 519 S----------FNFTD---------------------NAGLCGIPGLRACGPHLS 542
|
Length = 623 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 69.0 bits (169), Expect = 6e-13
Identities = 63/269 (23%), Positives = 121/269 (44%), Gaps = 28/269 (10%)
Query: 350 PAELLGRGKHGS--LYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVL 404
P +LG+G G LYR DD L++ K + +S ++ ++ + +I ++HPN++
Sbjct: 4 PIRVLGKGAFGEATLYRRTEDDSLVV-WKEVNLTRLSEKERRDALNEIVILSLLQHPNII 62
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
++ L+ EY G+L++ + + GQ F+ L + A++ IH+
Sbjct: 63 AYYNHFMDDNTLLIEMEYANGGTLYDKI-VRQKGQLFEEEMVLWYLFQIVSAVSYIHKA- 120
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTI 524
GI H ++K+ NI + ++G+ + S +A+T +S ++C +
Sbjct: 121 ---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-MAETVVGTPYYMSPELCQGV 176
Query: 525 ----KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580
K+D++ G +L ELLT K + N V +V+ +T V S E
Sbjct: 177 KYNFKSDIWALGCVLYELLTLKRT-FDATNPLNLVVKIVQGNYTPVV-------SVYSSE 228
Query: 581 RMLKLLQVALRCINQSPNERPSMNQVAVM 609
L+ + + Q P +RP+ ++V
Sbjct: 229 ----LISLVHSLLQQDPEKRPTADEVLDQ 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 68.9 bits (168), Expect = 6e-13
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 35/260 (13%)
Query: 354 LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK 413
LG G+ G ++ + +AVK L+ ++S E F Q + ++H + L L S+
Sbjct: 14 LGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRH-DKLVQLYAVVSE 72
Query: 414 QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGN 473
+ +V EY GSL + L E G++ + + +AA VA +A I R + I H +
Sbjct: 73 EPIYIVTEYMSKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIE---RMNYI-HRD 127
Query: 474 LKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMC----STIKADVY 529
L+S NIL + + I+++GL ++ Q + I + + TIK+DV+
Sbjct: 128 LRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 187
Query: 530 GFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM------- 582
FG++L EL+T V G N EV ++V RM
Sbjct: 188 SFGILLTELVTKGRVPYPGMN-------------NREVLEQV-----ERGYRMPCPQDCP 229
Query: 583 LKLLQVALRCINQSPNERPS 602
+ L ++ L+C + P ERP+
Sbjct: 230 ISLHELMLQCWKKDPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 68.7 bits (169), Expect = 7e-13
Identities = 62/288 (21%), Positives = 112/288 (38%), Gaps = 64/288 (22%)
Query: 352 ELLGRGKHGSLYRVVLDDG----LMLAVKRLRDWSISSE--DFKNRMQKIDHVKHPNVLP 405
+ LG G G +Y+ L +AVK L++ + E DF + + + HPNV+
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 406 PLAYYCSKQEKL-LVYEYQPNGSLFNLL------HGSENGQSFDWGSRLRVAACVAKALA 458
L C+++E L LV EY G L + L S + L A +AK +
Sbjct: 61 LLGV-CTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119
Query: 459 LIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLK------ 512
+ + H +L + N L ++ IS++GL + + + +
Sbjct: 120 YLASK----KFVHRDLAARNCLVGEDLVVKISDFGL--SRDVYDDDYYRKKTGGKLPIRW 173
Query: 513 --INDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWTV 565
+ + + ++ K+DV+ FGV+L E+ T G + N
Sbjct: 174 MAPESLKDGIFTS-KSDVWSFGVLLWEIFTLGATPYPGLSNE------------------ 214
Query: 566 EVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQV 606
EV + + R+ K L ++ L C P +RP+ +++
Sbjct: 215 EVLEYLR-----KGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSEL 257
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 9e-13
Identities = 49/228 (21%), Positives = 87/228 (38%), Gaps = 52/228 (22%)
Query: 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK----------- 399
+++G G ++ + A+K L + + +K+ +VK
Sbjct: 7 KIIGEGSFSTVVLAKEKETNKEYAIKIL------DKRQLIKEKKVKYVKIEKEVLTRLNG 60
Query: 400 HPNVLPPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALA 458
HP + L Y +E L V EY PNG L + + G S D AA + AL
Sbjct: 61 HPGI-IKLYYTFQDEENLYFVLEYAPNGELLQYIR--KYG-SLDEKCTRFYAAEILLALE 116
Query: 459 LIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIND--- 515
+H + GI H +LK NIL + +M I+++G + + S + D
Sbjct: 117 YLHSK----GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQI 172
Query: 516 ---------------------ISNQMCSTIKADVYGFGVILLELLTGK 542
++ + + +D++ G I+ ++LTGK
Sbjct: 173 EKNRRRFASFVGTAEYVSPELLNEK-PAGKSSDLWALGCIIYQMLTGK 219
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 2e-12
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 52/269 (19%)
Query: 354 LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK 413
LG G+ G ++ + +AVK L+ ++S E F Q + ++H L L CS+
Sbjct: 14 LGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDK-LVQLYAVCSE 72
Query: 414 QEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRV------AACVAKALALIHEELRE 466
+E + +V EY GSL + L E G +LR+ AA +A+ +A +
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKSGE-------GKKLRLPQLVDMAAQIAEGMAYLESR--- 122
Query: 467 DGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKIN----DISNQM 520
H +L + NIL N+ I+++GL ++ ++ + + + I + +N
Sbjct: 123 -NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA--REGAKFPIKWTAPEAANYG 179
Query: 521 CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580
TIK+DV+ FG++L E++T V G EV ++V
Sbjct: 180 RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-------------EVLEQV-----ERGY 221
Query: 581 RMLK-------LLQVALRCINQSPNERPS 602
RM + L + L+C ++ P ERP+
Sbjct: 222 RMPRPPNCPEELYDLMLQCWDKDPEERPT 250
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 67.1 bits (162), Expect = 7e-12
Identities = 52/277 (18%), Positives = 97/277 (35%), Gaps = 34/277 (12%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNR-------MQKIDHVKHPNVL 404
LG G G +Y D ++A+K L S R + ++H PN++
Sbjct: 6 RKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNH--PPNIV 61
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
++ + LV EY GSL +LL L + A + AL +H +
Sbjct: 62 KLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK- 120
Query: 465 REDGIAHGNLKSNNILFN-NNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS- 522
GI H ++K NIL + + + ++GL S + + + + +
Sbjct: 121 ---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP 177
Query: 523 -----------TIKADVYGFGVILLELLTGKL---VQNNGFNLATWVHSVVREEWTVEVF 568
+ +D++ G+ L ELLTG + N + + ++
Sbjct: 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237
Query: 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQ 605
+ LL+ + + + P R S +
Sbjct: 238 PLSPSNPELISKAASDLLK---KLLAKDPKNRLSSSS 271
|
Length = 384 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 68.0 bits (166), Expect = 8e-12
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 55 SSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSG-ILDTTSVCKTQSLVVLSLEENNIAGT 113
S++ +G+ C S ++ K++L +L G I + C +SL + L++N+ +G
Sbjct: 364 STNNLTGEIPEGLCSS--GNLFKLILFSNSLEGEIPKSLGAC--RSLRRVRLQDNSFSGE 419
Query: 114 VSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLT 173
+ E + + L + N L G + + +L+ L ++ N F LPD L
Sbjct: 420 LPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLEN 479
Query: 174 FFAENNQLRGGIPE--FDFSNLLQFNVSNNNLSGPVP 208
NQ G +P S L+Q +S N LSG +P
Sbjct: 480 LDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIP 516
|
Length = 968 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 65.2 bits (160), Expect = 1e-11
Identities = 65/287 (22%), Positives = 108/287 (37%), Gaps = 72/287 (25%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQK----IDHVKHPNVLPP 406
+ +G+G G +Y V DG + +K + D S SE + + + HPN++
Sbjct: 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEI-DLSNMSEKEREDALNEVKILKKLNHPNII-- 62
Query: 407 LAYYCSKQEK---LLVYEYQPNGSLFNLLH-GSENGQSF------DWGSRLRVAACVAKA 456
YY S +EK +V EY G L + + G+ F DW +L
Sbjct: 63 -KYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQL--------C 113
Query: 457 LAL--IHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN 514
LAL +H I H ++K NI +N + ++G+ + A+T
Sbjct: 114 LALKYLHSR----KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL-AKT------ 162
Query: 515 DISNQMCSTI---------------KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVV 559
+ T K+D++ G +L EL T K G NL ++
Sbjct: 163 -----VVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHP-FEGENLLELALKIL 216
Query: 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
+ + + I S E L + + + P ERPS+ Q+
Sbjct: 217 KGQ-----YPP--IPSQYSSE----LRNLVSSLLQKDPEERPSIAQI 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 63.7 bits (156), Expect = 3e-11
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 66/284 (23%)
Query: 352 ELLGRGKHGSLYR-VVLDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
ELLGRG GS+Y + D G ++AVK + S E+ + ++I ++HPN++
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIV--- 62
Query: 408 AYYCSKQEK----LLVY-EYQPNGSLFNLLHGSENGQSFDWGSRLRV-AACVAKALALIH 461
YY S++++ L ++ EY GSL +LL + +R + + LA +H
Sbjct: 63 RYYGSERDEEKNTLNIFLEYVSGGSLSSLL---KKFGKLP-EPVIRKYTRQILEGLAYLH 118
Query: 462 EELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQ-M 520
GI H ++K NIL +++ ++++G + ++ DI
Sbjct: 119 SN----GIVHRDIKGANILVDSDGVVKLADFGC---------------AKRLGDIETGEG 159
Query: 521 CSTI-------------------KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE 561
++ AD++ G ++E+ TGK + N ++ +
Sbjct: 160 TGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSS 219
Query: 562 EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQ 605
E I E SEE +C+ + P +RP+ ++
Sbjct: 220 GEPPE------IPEHLSEE----AKDFLRKCLRRDPKKRPTADE 253
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 7e-11
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 19/196 (9%)
Query: 354 LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK 413
LG G+ G ++ + ++ +AVK L+ ++ +DF Q + ++HP ++ L C+
Sbjct: 14 LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQ-LYAVCTL 72
Query: 414 QEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHG 472
+E + +V E GSL L G G++ + +AA VA +A L H
Sbjct: 73 EEPIYIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAY----LEAQNYIHR 127
Query: 473 NLKSNNILFNNNMEPCISEYGL--IVTEN-----HDQSF-LAQTSSLKINDISNQMCSTI 524
+L + N+L N ++++GL ++ E+ F + T+ N+ +I
Sbjct: 128 DLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAAL--YNRF--SI 183
Query: 525 KADVYGFGVILLELLT 540
K+DV+ FG++L E++T
Sbjct: 184 KSDVWSFGILLTEIVT 199
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 1e-10
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 25/255 (9%)
Query: 354 LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK 413
LG+G G ++ + +A+K L+ ++S E F Q + ++H L L S+
Sbjct: 14 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEK-LVQLYAVVSE 72
Query: 414 QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGN 473
+ +V EY GSL + L G E G+ + +AA +A +A + H +
Sbjct: 73 EPIYIVTEYMSKGSLLDFLKG-EMGKYLRLPQLVDMAAQIASGMAYVERM----NYVHRD 127
Query: 474 LKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMC----STIKADVY 529
L++ NIL N+ ++++GL ++ Q + I + + TIK+DV+
Sbjct: 128 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 187
Query: 530 GFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL--IAEAASEERMLKLLQ 587
FG++L EL T V G V R EV D+V E L
Sbjct: 188 SFGILLTELTTKGRVPYPGM--------VNR-----EVLDQVERGYRMPCPPECPESLHD 234
Query: 588 VALRCINQSPNERPS 602
+ +C + P ERP+
Sbjct: 235 LMCQCWRKEPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 2e-10
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 94 VCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153
V + Q+L +L L NN G + +++ +L L + NK SG +P +L K NNL LD+
Sbjct: 304 VIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDL 363
Query: 154 SNNNFSSELPDLSRISGLLT-FFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208
S NN + E+P+ SG L +N L G IP+ +L + + +N+ SG +P
Sbjct: 364 STNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELP 421
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 2e-10
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 28/165 (16%)
Query: 71 RQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVG 130
+ KS++ I L NLSG + + SL L L NN+ G + + N K L +L++
Sbjct: 210 QMKSLKWIYLGYNNLSGEI-PYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLY 268
Query: 131 RNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDL-SRISGL--LTFFAEN--------- 178
+NKLSG +P S+ L L LD+S+N+ S E+P+L ++ L L F+ N
Sbjct: 269 QNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVAL 328
Query: 179 -------------NQLRGGIPE--FDFSNLLQFNVSNNNLSGPVP 208
N+ G IP+ +NL ++S NNL+G +P
Sbjct: 329 TSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIP 373
|
Length = 968 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 2e-10
Identities = 69/294 (23%), Positives = 124/294 (42%), Gaps = 54/294 (18%)
Query: 352 ELLGRGKHGSLYRVVLD-DGLML--AVKRLRDWSISSE--DFKNRMQ---KIDHVKHPNV 403
+++G G G + + + DGL + A+KR+++++ + DF ++ K+ H HPN+
Sbjct: 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH--HPNI 58
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGS-----------ENGQSFDWGSR--LRVA 450
+ L + L EY P+G+L + L S N + S+ L A
Sbjct: 59 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 118
Query: 451 ACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS 510
A VA+ + + L + H +L + NIL N I+++GL + ++ +T
Sbjct: 119 ADVARGM----DYLSQKQFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMG 171
Query: 511 ------LKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV---VRE 561
+ I + N T +DV+ +GV+L E+++ G A + R
Sbjct: 172 RLPVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL 230
Query: 562 EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615
E + DEV + +C + P ERPS Q+ V +N + E
Sbjct: 231 EKPLNCDDEV--------------YDLMRQCWREKPYERPSFAQILVSLNRMLE 270
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 3e-10
Identities = 53/199 (26%), Positives = 101/199 (50%), Gaps = 18/199 (9%)
Query: 354 LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDF---KNRMQKIDHVKHPNVLPPLAYY 410
LG G+ G ++ ++ +AVK L+ ++S + F N M+ + H K L L
Sbjct: 14 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDK----LVRLYAV 69
Query: 411 CSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
+K+E + ++ EY GSL + L S+ G + +A +A+ +A I R++ I
Sbjct: 70 VTKEEPIYIITEYMAKGSLLDFLK-SDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYI 125
Query: 470 AHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN----DISNQMCSTIK 525
H +L++ N+L + ++ I+++GL ++ + + I + N TIK
Sbjct: 126 -HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 184
Query: 526 ADVYGFGVILLELLT-GKL 543
+DV+ FG++L E++T GK+
Sbjct: 185 SDVWSFGILLYEIVTYGKI 203
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 4e-10
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 45/283 (15%)
Query: 352 ELLGRGKHGSLYRVVLDDG--LMLAVKRL-----------RDWSISSEDFKNRMQKI-DH 397
E LG G G +Y+V + +LA+K + R+ S D + + I +
Sbjct: 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ 65
Query: 398 VKHPNVLPPLAYYCSKQEKLLVY------EYQPNGSLFNLLHGSENGQSFDWGSRLRVAA 451
++HPN++ YY + E +Y E P G FN L E Q F +
Sbjct: 66 LRHPNIV---RYYKTFLENDRLYIVMDLIEGAPLGEHFNSL--KEKKQRFTEERIWNIFV 120
Query: 452 CVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSL 511
+ AL +H+E R I H +L NNI+ + + I+++GL + + + ++
Sbjct: 121 QMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTI 177
Query: 512 KIN--DISNQMCSTIKADVYGFGVILLEL--LTGKLVQNNGFNLATWVHSVVREEWTVEV 567
+ +I KADV+ FG IL ++ L N +LAT + V E +
Sbjct: 178 LYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGM 237
Query: 568 FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMI 610
+ E + V C+ RP + QV+ MI
Sbjct: 238 YSE-------------DVTDVITSCLTPDAEARPDIIQVSAMI 267
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 60.5 bits (146), Expect = 4e-10
Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 21/257 (8%)
Query: 354 LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK 413
LG+G G ++ + +A+K L+ ++ E F Q + ++H + L PL S+
Sbjct: 14 LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRH-DKLVPLYAVVSE 72
Query: 414 QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGN 473
+ +V E+ GSL + L + G+ + +AA +A +A I R + I H +
Sbjct: 73 EPIYIVTEFMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIE---RMNYI-HRD 127
Query: 474 LKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMC----STIKADVY 529
L++ NIL +N+ I+++GL ++ Q + I + + TIK+DV+
Sbjct: 128 LRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 187
Query: 530 GFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVA 589
FG++L EL+T V G V+ V E+ VE + + E L ++
Sbjct: 188 SFGILLTELVTKGRVPYPGM-----VNREVLEQ--VERGYRMPCPQGCPES----LHELM 236
Query: 590 LRCINQSPNERPSMNQV 606
C + P+ERP+ +
Sbjct: 237 KLCWKKDPDERPTFEYI 253
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 60.3 bits (146), Expect = 5e-10
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 27/258 (10%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDF---KNRMQKIDHVKHPNVLPPLA 408
+ LG G+ G ++ + +A+K L+ S+S E F N M+++ H + L L
Sbjct: 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPR----LVRLY 67
Query: 409 YYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG 468
+++ ++ EY NGSL + L E G + +AA +A+ +A I R++
Sbjct: 68 AVVTQEPIYIITEYMENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIE---RKNY 123
Query: 469 IAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN----DISNQMCSTI 524
I H +L++ NIL + + I+++GL ++ + + I + N TI
Sbjct: 124 I-HRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 182
Query: 525 KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584
K+DV+ FG++L E++T + G V++ +E + + EE
Sbjct: 183 KSDVWSFGILLTEIVTYGRIPYPGMTNP----EVIQ---NLERGYRMPRPDNCPEE---- 231
Query: 585 LLQVALRCINQSPNERPS 602
L ++ C + P ERP+
Sbjct: 232 LYELMRLCWKEKPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 5e-10
Identities = 75/315 (23%), Positives = 135/315 (42%), Gaps = 61/315 (19%)
Query: 339 NKLKFEDLLRAPAELLGRGKHGSLYRV-VLDDGLML--AVKRLRDWSISSE--DFKNRMQ 393
N +KF+D++ G G G + + + DGL + A+KR+++++ + DF ++
Sbjct: 7 NDIKFQDVI-------GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE 59
Query: 394 ---KIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGS---ENGQSFDWGSR- 446
K+ H HPN++ L + L EY P+G+L + L S E +F +
Sbjct: 60 VLCKLGH--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 117
Query: 447 ---------LRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497
L AA VA+ + L + H +L + NIL N I+++GL
Sbjct: 118 ASTLSSQQLLHFAADVARGMDY----LSQKQFIHRDLAARNILVGENYVAKIADFGL--- 170
Query: 498 ENHDQSFLAQTSS------LKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNL 551
+ ++ +T + I + N T +DV+ +GV+L E+++ G
Sbjct: 171 SRGQEVYVKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 229
Query: 552 ATWVHSV---VREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608
A + R E + DEV L++ +C + P ERPS Q+ V
Sbjct: 230 AELYEKLPQGYRLEKPLNCDDEVY-----------DLMR---QCWREKPYERPSFAQILV 275
Query: 609 MINNIKEEEERSISS 623
+N + EE + +++
Sbjct: 276 SLNRMLEERKTYVNT 290
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 1e-09
Identities = 54/189 (28%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 52 WNRSSDPCSGKWVGVTCD--SRQKS---------------------VRKIVLDGFNLSGI 88
WN S+D C W G+TC+ SR S ++ I L LSG
Sbjct: 51 WNSSADVC--LWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGP 108
Query: 89 LDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNL 148
+ + SL L+L NN G++ + L L + N LSG +P+ + ++L
Sbjct: 109 IPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPN--LETLDLSNNMLSGEIPNDIGSFSSL 166
Query: 149 KRLDISNNNFSSELP-DLSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNNLSG 205
K LD+ N ++P L+ ++ L +NQL G IP +L + NNLSG
Sbjct: 167 KVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSG 226
Query: 206 PVPGVNGRL 214
+P G L
Sbjct: 227 EIPYEIGGL 235
|
Length = 968 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 1e-09
Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 61/305 (20%)
Query: 341 LKFEDLLRAPAELLGRGKHGSLYRVVLD-DGLML--AVKRLRDWSISSE--DFKNRMQ-- 393
+KFED++ G G G + R ++ DGL + A+K L++++ ++ DF ++
Sbjct: 4 IKFEDVI-------GEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVL 56
Query: 394 -KIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGS-----------ENGQSF 441
K+ H HPN++ L ++ + EY P G+L + L S E+G +
Sbjct: 57 CKLGH--HPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTAS 114
Query: 442 DWGSR--LRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499
S+ L+ A+ VA + + L E H +L + N+L N+ I+++GL
Sbjct: 115 TLTSQQLLQFASDVATGM----QYLSEKQFIHRDLAARNVLVGENLASKIADFGL---SR 167
Query: 500 HDQSFLAQTSS------LKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLAT 553
++ ++ +T + I + N T K+DV+ FGV+L E+++ G A
Sbjct: 168 GEEVYVKKTMGRLPVRWMAIESL-NYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE 226
Query: 554 WVHSV---VREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMI 610
+ R E DEV ++ +C P ERP Q++V +
Sbjct: 227 LYEKLPQGYRMEKPRNCDDEV--------------YELMRQCWRDRPYERPPFAQISVQL 272
Query: 611 NNIKE 615
+ + E
Sbjct: 273 SRMLE 277
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 2e-09
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 23/203 (11%)
Query: 354 LGRGKHGSLYRVVLD-----DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPP 406
LG G G + D G +AVK L DF+ ++ + + H N++
Sbjct: 12 LGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVK- 70
Query: 407 LAYYCSKQ---EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
C K L+ EY P+GSL + L + + L ++ + K + + +
Sbjct: 71 YKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQI--NLKRLLLFSSQICKGMDYLGSQ 128
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISNQMC 521
H +L + NIL + IS++GL ++ E+ D ++ + I + +
Sbjct: 129 ----RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECL 184
Query: 522 ST----IKADVYGFGVILLELLT 540
T +DV+ FGV L EL T
Sbjct: 185 RTSKFSSASDVWSFGVTLYELFT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 2e-09
Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 354 LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDF---KNRMQKIDHVKHPNVLPPLAYY 410
LG G+ G ++ + +AVK ++ S+S E F N M+ + H K L L
Sbjct: 14 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDK----LVKLHAV 69
Query: 411 CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470
+K+ ++ E+ GSL + L S+ G + +A +A+ +A I +
Sbjct: 70 VTKEPIYIITEFMAKGSLLDFLK-SDEGSKQPLPKLIDFSAQIAEGMAFIEQR----NYI 124
Query: 471 HGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKIN--DISNQMCSTIKA 526
H +L++ NIL + ++ I+++GL ++ +N + +K + N TIK+
Sbjct: 125 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 184
Query: 527 DVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586
DV+ FG++L+E++T + G + + ++ R + E EE L
Sbjct: 185 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-------RMPRPENCPEE----LY 233
Query: 587 QVALRCINQSPNERPS 602
+ +RC P ERP+
Sbjct: 234 NIMMRCWKNRPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 57.5 bits (140), Expect = 4e-09
Identities = 67/273 (24%), Positives = 103/273 (37%), Gaps = 64/273 (23%)
Query: 354 LGRGKHGSLYRV-VLDDGLMLAVKRLRDWSISSEDFKNRMQK----IDHVKHPNVLPPLA 408
LG+G G + V D G + A+K L+ I + + HP + L
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPF-IVKLH 59
Query: 409 YYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED 467
Y +EKL LV EY P G LF+ L S+ G F AA + AL +H
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSHL--SKEG-RFSEERARFYAAEIVLALEYLHSL---- 112
Query: 468 GIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDIS--NQMCST-- 523
GI + +LK NIL + + ++++GL + ++ S N C T
Sbjct: 113 GIIYRDLKPENILLDADGHIKLTDFGL--------------AKELSSEGSRTNTFCGTPE 158
Query: 524 ------IKADVYG-------FGVILLELLTGKLVQNNGF---NLATWVHSVVREEWTVEV 567
+ YG GV+L E+LTGK F + ++++
Sbjct: 159 YLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPP----FYAEDRKEIYEKILKDP---LR 211
Query: 568 FDEVLIAEAASEERMLKLLQVALRCINQSPNER 600
F E L EA L+ + + P +R
Sbjct: 212 FPEFLSPEARD------LIS---GLLQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 4e-09
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 42/275 (15%)
Query: 354 LGRGKHGSLYRVVLDDGLMLAVKRL-RDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS 412
LG G G ++ + + + +A+K L D + +DF+ +Q + ++H +++ A CS
Sbjct: 14 LGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAV-CS 72
Query: 413 KQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAH 471
E + ++ E GSL L E GQ S + +A VA+ +A L E H
Sbjct: 73 VGEPVYIITELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAY----LEEQNSIH 127
Query: 472 GNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKI-------NDISNQMCS 522
+L + NIL ++ ++++GL ++ E+ + +S KI S+ S
Sbjct: 128 RDLAARNILVGEDLVCKVADFGLARLIKED-----VYLSSDKKIPYKWTAPEAASHGTFS 182
Query: 523 TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582
T K+DV+ FG++L E+ T V G N EV+D I
Sbjct: 183 T-KSDVWSFGILLYEMFTYGQVPYPGMN-------------NHEVYD--QITAGYRMPCP 226
Query: 583 LK----LLQVALRCINQSPNERPSMNQVAVMINNI 613
K + ++ L C P +RPS + ++NI
Sbjct: 227 AKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 6e-09
Identities = 63/275 (22%), Positives = 124/275 (45%), Gaps = 41/275 (14%)
Query: 354 LGRGKHGSLYRVVLDD-GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS 412
LG G++G +Y V L +AVK L++ ++ E+F + +KHPN++ L C+
Sbjct: 14 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV-CT 72
Query: 413 KQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAH 471
++ ++ E+ G+L + L N Q + L +A ++ A+ E L + H
Sbjct: 73 REPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAM----EYLEKKNFIH 127
Query: 472 GNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQT-----------SSLKINDISN 518
+L + N L N ++++GL ++T + ++ A SL N S
Sbjct: 128 RDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNKFS- 183
Query: 519 QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578
IK+DV+ FGV+L E+ T + G +L + V+ ++ + + +E
Sbjct: 184 -----IKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKGYRME-------RPEGC 230
Query: 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613
++ +L+ C +P++RPS ++ +
Sbjct: 231 PPKVYELM---RACWQWNPSDRPSFAEIHQAFETM 262
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 7e-09
Identities = 64/277 (23%), Positives = 107/277 (38%), Gaps = 38/277 (13%)
Query: 354 LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSE--DFKNRMQKIDHVKHPNVLPPLAYYC 411
G+ G LY +D ++A+K L+D + + +F+ + + HPN++ L
Sbjct: 18 FGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT 77
Query: 412 SKQEKLLVYEYQPNGSLFNLL-----------HGSENG---QSFDWGSRLRVAACVAKAL 457
+Q +++EY G L L E+G S D G L +A +A +
Sbjct: 78 QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGM 137
Query: 458 ALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSL------ 511
E L H +L + NIL + IS+ GL + Q SL
Sbjct: 138 ----EYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWM 193
Query: 512 KINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571
I S+ +D++ FGV+L E+ + L GF+ V +VR+ ++
Sbjct: 194 PPEAIMYGKFSS-DSDIWSFGVVLWEIFSFGLQPYYGFS-NQEVIEMVRKR-------QL 244
Query: 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608
L RM L+ C + P+ RP +
Sbjct: 245 LPCSEDCPPRMYSLMT---ECWQEGPSRRPRFKDIHT 278
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 60/270 (22%), Positives = 109/270 (40%), Gaps = 57/270 (21%)
Query: 373 LAVKRLRDWSISSE--DFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430
+AVK L++ + SSE D + + V HP+V+ LL+ EY GSL +
Sbjct: 33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92
Query: 431 LLH-------------GSENGQSFD--------WGSRLRVAACVAKALALIHEELREDGI 469
L G+ N D G + A +++ + L E +
Sbjct: 93 FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQY----LAEMKL 148
Query: 470 AHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS------LKINDISNQMCST 523
H +L + N+L + IS++GL + S++ ++ + I + + + +T
Sbjct: 149 VHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTT 208
Query: 524 IKADVYGFGVILLELLT------GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577
++DV+ FGV+L E++T + FNL + + R E
Sbjct: 209 -QSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMER-------------PENC 254
Query: 578 SEERMLKLLQVALRCINQSPNERPSMNQVA 607
SEE + + L C Q P++RP+ ++
Sbjct: 255 SEE----MYNLMLTCWKQEPDKRPTFADIS 280
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 52/212 (24%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKR--LRDWSISSEDFKNRMQKIDHVKHPNVLPPLA 408
E++G G +Y + L + +A+KR L S ++ + +Q + HPNV+
Sbjct: 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVV---K 63
Query: 409 YYCS---KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
YY S E LV Y GSL +++ S D V V K L +H
Sbjct: 64 YYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS--- 120
Query: 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQT---SSLKINDISNQMC- 521
+G H ++K+ NIL + I+++G+ + LA + C
Sbjct: 121 -NGQIHRDIKAGNILLGEDGSVKIADFGV-------SASLADGGDRTRKVRKTFVGTPCW 172
Query: 522 -----------STIKADVYGFGVILLELLTGK 542
KAD++ FG+ +EL TG
Sbjct: 173 MAPEVMEQVHGYDFKADIWSFGITAIELATGA 204
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 2e-08
Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 38/264 (14%)
Query: 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK------HPNVL 404
+G+G G +++VV D + A+K++ +S + + R + ID + ++
Sbjct: 6 NKIGKGSFGVVFKVVRKADKRVYAMKQI---DLSKMNRREREEAIDEARVLAKLDSSYII 62
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
+ K + +V EY NG L LL + G+ R + LA +H +
Sbjct: 63 RYYESFLDKGKLNIVMEYAENGDLHKLLK-MQRGRPLPEDQVWRFFIQILLGLAHLHSK- 120
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS-- 522
I H ++KS N+ + I + G+ + D + A T +S ++C
Sbjct: 121 ---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLS-DNTNFANTIVGTPYYLSPELCEDK 176
Query: 523 --TIKADVYGFGVILLELLTGKL---VQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577
K+DV+ GV+L E TGK N G + ++R +
Sbjct: 177 PYNEKSDVWALGVVLYECCTGKHPFDANNQG----ALILKIIRGVF-----------PPV 221
Query: 578 SEERMLKLLQVALRCINQSPNERP 601
S+ +L Q+ +C+ + +RP
Sbjct: 222 SQMYSQQLAQLIDQCLTKDYRQRP 245
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 2e-08
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 54/272 (19%)
Query: 354 LGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQ-----KIDH-VKHPNVLPP 406
LG+G G +Y+V G + A+K++ D + R Q K + P V+
Sbjct: 9 LGQGSSGVVYKVRHKPTGKIYALKKI----HVDGDEEFRKQLLRELKTLRSCESPYVVKC 64
Query: 407 LAYYCSKQEKLLVYEYQPNGSLFNLL--HG--SENGQSFDWGSRLRVAACVAKALALIHE 462
+ + E +V EY GSL +LL G E ++ +A + K L +H
Sbjct: 65 YGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAY-------IARQILKGLDYLHT 117
Query: 463 ELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSL----------K 512
+ I H ++K +N+L N+ E I+++G +++ + + L Q ++ +
Sbjct: 118 KRH---IIHRDIKPSNLLINSKGEVKIADFG--ISKVLENT-LDQCNTFVGTVTYMSPER 171
Query: 513 INDISNQMCSTIKADVYGFGVILLELLTGK--LVQNNGFNLATWVHSVVREEWTVEVFDE 570
I + S AD++ G+ LLE GK + + + ++
Sbjct: 172 IQ---GESYSY-AADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGP------PP 221
Query: 571 VLIAEAASEERMLKLLQVALRCINQSPNERPS 602
L AE S E + C+ + P +RPS
Sbjct: 222 SLPAEEFSPE-FRDFIS---ACLQKDPKKRPS 249
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 4e-08
Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 39/210 (18%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQK-------IDHVKHPNVL 404
E +G+G G +Y+ VL +AVK R S + +K + HPN++
Sbjct: 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCR-----STLPPDLKRKFLQEAEILKQYDHPNIV 55
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAA----CVAKALALI 460
+ KQ +V E P GSL L +N RL V + A +
Sbjct: 56 KLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKN--------RLTVKKLLQMSLDAAAGME 107
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQM 520
+ E + H +L + N L N IS++G+ E + T S + I +
Sbjct: 108 YLESKN--CIHRDLAARNCLVGENNVLKISDFGM-SREEEGGIY---TVSDGLKQIPIKW 161
Query: 521 CS---------TIKADVYGFGVILLELLTG 541
+ T ++DV+ +G++L E +
Sbjct: 162 TAPEALNYGRYTSESDVWSYGILLWETFSL 191
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 4e-08
Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 32/226 (14%)
Query: 352 ELLGRGKHGSLYR---VVLDDGLM---LAVKRLRDWSISS--EDFKNRMQKIDHVKHPNV 403
E LG G G +Y+ ++ L +A+K L++ + ++F+ + + ++HPN+
Sbjct: 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNI 70
Query: 404 LPPLAYYCSKQEKL-LVYEYQPNGSLFNLL-------------HGSENGQSFDWGSRLRV 449
+ L C+K++ +++EY +G L L S D L +
Sbjct: 71 VCLLGV-CTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHI 129
Query: 450 AACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI-VTENHDQSFLAQT 508
A +A + E L H +L + N L + IS++GL + D +
Sbjct: 130 AIQIAAGM----EYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSK 185
Query: 509 SSLKINDISNQMCS----TIKADVYGFGVILLELLTGKLVQNNGFN 550
S L + + + T ++D++ FGV+L E+ + L GF+
Sbjct: 186 SLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS 231
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 5e-08
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 23/141 (16%)
Query: 354 LGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKN------RMQKIDHVKHPNVLPP 406
+G G G +Y V LD G ++AVK +R I D K M+ ++ +KHPN++
Sbjct: 8 IGGGTFGKVYTAVNLDTGELMAVKEIR---IQDNDPKTIKEIADEMKVLELLKHPNLV-- 62
Query: 407 LAYYCSK--QEKLLVY-EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
YY + +EK+ ++ EY G+L LL E+G+ D + + LA +H
Sbjct: 63 -KYYGVEVHREKVYIFMEYCSGGTLEELL---EHGRILDEHVIRVYTLQLLEGLAYLHSH 118
Query: 464 LREDGIAHGNLKSNNILFNNN 484
GI H ++K NI ++N
Sbjct: 119 ----GIVHRDIKPANIFLDHN 135
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 6e-08
Identities = 45/220 (20%), Positives = 94/220 (42%), Gaps = 46/220 (20%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKI-----------DHVK 399
EL+G+G +G +Y + + G M+AVK++ + + +R + + +
Sbjct: 7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD 66
Query: 400 HPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALAL 459
H N++ L + +++ + EY P GS+ + L F+ V + LA
Sbjct: 67 HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCL---RTYGRFEEQLVRFFTEQVLEGLAY 123
Query: 460 IHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQ 519
+H + GI H +LK++N+L + + IS++G+ ++ + ND +
Sbjct: 124 LHSK----GILHRDLKADNLLVDADGICKISDFGIS----------KKSDDIYDNDQNMS 169
Query: 520 MCSTI-----------------KADVYGFGVILLELLTGK 542
M ++ K D++ G ++LE+ G+
Sbjct: 170 MQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 7e-08
Identities = 50/235 (21%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 385 SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKL----LVYEYQPNGSLFNLLHGSENGQS 440
+ +N ++ + + N+L + + L L+ EY G L +L + +
Sbjct: 62 IDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVL---DKEKD 118
Query: 441 FDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL----IV 496
+ ++L +A K L ++ + + NL S + L N + I +GL
Sbjct: 119 LSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSS 175
Query: 497 TENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH 556
+ +F+ S +NDI ++ TIK D+Y GV+L E+ TGK+ F T
Sbjct: 176 PPFKNVNFMVYFSYKMLNDIFSEY--TIKDDIYSLGVVLWEIFTGKI----PFENLT--- 226
Query: 557 SVVREEWTVEVFDEVLIAEAASEERM-----LKLLQVALRCINQSPNERPSMNQV 606
T E++D LI + ++ L++ + C + +RP++ ++
Sbjct: 227 -------TKEIYD--LIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEI 272
|
Length = 283 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 8e-08
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 350 PAEL-----LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVL 404
P+EL LG G+ G ++ + +A+K +R+ ++S +DF + + + HPN L
Sbjct: 3 PSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPN-L 61
Query: 405 PPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
L C+KQ + +V EY NG L N L E L + + V +A+ E
Sbjct: 62 VQLYGVCTKQRPIFIVTEYMANGCLLNYLR--ERKGKLGTEWLLDMCSDVCEAM----EY 115
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN----DISNQ 519
L +G H +L + N L + +S++GL DQ +Q + + ++ +
Sbjct: 116 LESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDY 175
Query: 520 MCSTIKADVYGFGVILLELLT-GKL 543
+ K+DV+ FGV++ E+ + GK+
Sbjct: 176 SRFSSKSDVWSFGVLMWEVFSEGKM 200
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 9e-08
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 350 PAEL-----LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVL 404
P+EL +G G+ G ++ + +A+K +R+ ++S EDF Q + + HP L
Sbjct: 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPK-L 61
Query: 405 PPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
L C+++ + LV+E+ +G L + L ++ G F + L + V + +A
Sbjct: 62 VQLYGVCTERSPICLVFEFMEHGCLSDYLR-AQRG-KFSQETLLGMCLDVCEGMAY---- 115
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLI-------VTENHDQSFLAQTSSLKINDI 516
L + H +L + N L N +S++G+ T + F + SS ++
Sbjct: 116 LESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSF 175
Query: 517 SNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFN 550
S + K+DV+ FGV++ E+ + GK N N
Sbjct: 176 SKY---SSKSDVWSFGVLMWEVFSEGKTPYENRSN 207
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 1e-07
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 32/209 (15%)
Query: 352 ELLGRGKHGSL----YRVVLDD-GLMLAVKRLRDWSISS-EDFKNRMQKIDHVKHPNVLP 405
+ LG+G GS+ Y + D+ G ++AVK+L+ + DF+ ++ + ++H N++
Sbjct: 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVK 69
Query: 406 --PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
+ Y ++ LV EY P GSL + L ++ + D L A+ + K + E
Sbjct: 70 YKGVCYSAGRRNLRLVMEYLPYGSLRDYL--QKHRERLDHRKLLLYASQICKGM----EY 123
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHD--------QS--FLAQTSSL 511
L H +L + NIL + I ++GL ++ ++ + +S F SL
Sbjct: 124 LGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESL 183
Query: 512 KINDISNQMCSTIKADVYGFGVILLELLT 540
+ S +DV+ FGV+L EL T
Sbjct: 184 TESKFSVA------SDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 2e-07
Identities = 63/295 (21%), Positives = 122/295 (41%), Gaps = 60/295 (20%)
Query: 352 ELLGRGKHGSLYRVVL--DDG--LMLAVKRLRDWSISS---EDFKN---RMQKIDHVKHP 401
++LG G+ GS+ L DDG L +AVK ++ + E+F + M+ DH P
Sbjct: 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH---P 61
Query: 402 NV--LPPLAYYCSKQEK----LLVYEYQPNGSLFNLLHGS---ENGQSFDWGSRLRVAAC 452
NV L + + S +K +++ + +G L + L S + + L+
Sbjct: 62 NVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVD 121
Query: 453 VAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLK 512
+A + E L H +L + N + +M C++++GL + + Q K
Sbjct: 122 IALGM----EYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKI-YSGDYYRQGRIAK 176
Query: 513 -------INDISNQMCSTIKADVYGFGVILLELLTGKL-----VQNNGFNLATWVHSVVR 560
I +++++ T K+DV+ FGV + E+ T V+N+
Sbjct: 177 MPVKWIAIESLADRV-YTSKSDVWAFGVTMWEIATRGQTPYPGVENH------------- 222
Query: 561 EEWTVEVFDEVLIAE--AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613
E++D + E+ + +L + C P +RP+ ++ ++ NI
Sbjct: 223 -----EIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 352 ELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSISSE--DFKNRMQKIDHVKHPNVLP 405
+++G G+ G + R L + +A+K L+ S + DF + HPN++
Sbjct: 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIR 69
Query: 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
+ +++ EY NGSL L EN F G + + +A + L
Sbjct: 70 LEGVVTKSRPVMIITEYMENGSLDKFLR--ENDGKFTVGQLVGMLRGIASGMKY----LS 123
Query: 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLI-VTENHDQSFLAQTSSLKI-------NDIS 517
E H +L + NIL N+N+ +S++GL E+ + ++ T KI I+
Sbjct: 124 EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY--TTKGGKIPIRWTAPEAIA 181
Query: 518 NQMCSTIKADVYGFGVILLELLT 540
+ ++ +DV+ FG+++ E+++
Sbjct: 182 YRKFTS-ASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 3e-07
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 41/252 (16%)
Query: 373 LAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKL-LVYEYQPNGSLFNL 431
+A+K +++ S+S ++F + + + H L L C+KQ + +V EY NG L N
Sbjct: 31 VAIKMIKEGSMSEDEFIEEAKVMMKLSHEK-LVQLYGVCTKQRPIYIVTEYMSNGCLLNY 89
Query: 432 LHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISE 491
L E+G+ F L + V + +A L H +L + N L ++ +S+
Sbjct: 90 LR--EHGKRFQPSQLLEMCKDVCEGMAY----LESKQFIHRDLAARNCLVDDQGCVKVSD 143
Query: 492 YGL--IVTENHDQSFLAQTSSLKINDISNQMCS--TIKADVYGFGVILLELLT-GKLVQN 546
+GL V ++ S + ++ + + S + K+DV+ FGV++ E+ + GK+
Sbjct: 144 FGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKM--- 200
Query: 547 NGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML--------KLLQVALRCINQSPN 598
E F+ E S+ L K+ + C ++
Sbjct: 201 -----------------PYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAE 243
Query: 599 ERPSMNQVAVMI 610
ERP+ Q+ I
Sbjct: 244 ERPTFQQLLSSI 255
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 6e-07
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152
++ L VL L N +G + + + LT L + N L+G +P+ L NL +L
Sbjct: 327 ALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLI 386
Query: 153 ISNNNFSSELP-DLSRISGLLTFFAENNQLRGGIP-EFDFSNLLQF-NVSNNNLSG 205
+ +N+ E+P L L ++N G +P EF L+ F ++SNNNL G
Sbjct: 387 LFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQG 442
|
Length = 968 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 8e-07
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 353 LLGRGKHGSLYRVVLD--DGLMLAVKR--LRDWSISSEDFKNRM--------QKIDHVKH 400
L+G G GS+Y + ++ G ++AVK+ L S SS+D K M + ++H
Sbjct: 7 LIGSGSFGSVY-LGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH 65
Query: 401 PNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALI 460
N++ L + EY P GS+ LL N +F+ + K L +
Sbjct: 66 ENIVQYLGSSLDADHLNIFLEYVPGGSVAALL---NNYGAFEETLVRNFVRQILKGLNYL 122
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPCISEYG---------LIVTENHDQSFLAQTSSL 511
H GI H ++K NIL +N IS++G L N + L +
Sbjct: 123 HNR----GIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFW 178
Query: 512 KINDISNQMCSTIKADVYGFGVILLELLTGK 542
++ Q T KAD++ G +++E+LTGK
Sbjct: 179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 8e-07
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 29/207 (14%)
Query: 352 ELLGRGKHGSLYR-VVLDDGLMLAVKRLRDWSISSEDFKNR---------MQKIDHVKHP 401
ELLG G GS+Y + LDDG AVK + S++ + + + + ++HP
Sbjct: 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEV---SLADDGQTGQEAVKQLEQEIALLSKLQHP 62
Query: 402 NVLPPLAYYCSKQE--KLLVY-EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALA 458
N++ Y +++E L ++ E P GSL LL + SF V + +
Sbjct: 63 NIV---QYLGTEREEDNLYIFLELVPGGSLAKLL---KKYGSFPE----PVIRLYTRQIL 112
Query: 459 LIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL---IVTENHDQSFLAQTSSLKIND 515
L E L + H ++K NIL + N ++++G+ +V + +SF +
Sbjct: 113 LGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEV 172
Query: 516 ISNQMCSTIKADVYGFGVILLELLTGK 542
I+ Q + AD++ G +LE+ TGK
Sbjct: 173 IAQQGGYGLAADIWSLGCTVLEMATGK 199
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 9e-07
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 354 LGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLA-YYC 411
LG+G +GS+Y+V+ G+ +A+K +R + F + ++D + H V P + +Y
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEIR-LELDESKFNQIIMELD-ILHKAVSPYIVDFYG 66
Query: 412 SKQEKLLVY---EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG 468
+ + VY EY GSL L G + R+ V K L + EE
Sbjct: 67 AFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--- 123
Query: 469 IAHGNLKSNNILFNNNMEPCISEYG--------LIVTENHDQSFLAQTSSLKINDISNQM 520
I H ++K N+L N N + + ++G L T QS++A +K +
Sbjct: 124 IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMA-PERIKSGGPNQNP 182
Query: 521 CSTIKADVYGFGVILLELLTGK 542
T+++DV+ G+ +LE+ G+
Sbjct: 183 TYTVQSDVWSLGLSILEMALGR 204
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+L L L +N I ++ + N L +L + N LS +LP LS L+NL LD+S N
Sbjct: 141 NLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKI 198
Query: 159 SSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNL 203
S P++ +S L NN + + + NL +SNN L
Sbjct: 199 SDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKL 244
|
Length = 394 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 4e-06
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 352 ELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSI-----SSEDFKNRMQKIDHVKHPN 402
++LG G +G ++ V D G + A+K L+ ++ + E + ++HV+
Sbjct: 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSP 65
Query: 403 VLPPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIH 461
L L Y + KL L+ +Y G +F L+ +N + R + LAL
Sbjct: 66 FLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDE--VRFYSGEII---LAL-- 118
Query: 462 EELREDGIAHGNLKSNNILFNNNMEPCISEYGL---IVTENHDQ--SFLAQTSSLKINDI 516
E L + GI + ++K NIL ++ ++++GL ++E ++ SF + I
Sbjct: 119 EHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEII 178
Query: 517 SNQMCSTIKADVYGFGVILLELLTG 541
+ D + G+++ ELLTG
Sbjct: 179 RGKGGHGKAVDWWSLGILIFELLTG 203
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 5e-06
Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 32/265 (12%)
Query: 353 LLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSED---FKNRMQKIDHVKHPNVLPPLA 408
++GRG G ++ D ++ +K++ ++ ++ +N Q + + HPN++
Sbjct: 7 VVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYE 66
Query: 409 YYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG 468
+ + ++V EY P G+L + N D + L + AL +H +L
Sbjct: 67 NFLEDKALMIVMEYAPGGTLAEYIQKRCN-SLLDEDTILHFFVQILLALHHVHTKL---- 121
Query: 469 IAHGNLKSNNILFN-NNMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISNQMCS--- 522
I H +LK+ NIL + + M I ++G+ I++ + T IS ++C
Sbjct: 122 ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTP----CYISPELCEGKP 177
Query: 523 -TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581
K+D++ G +L EL + K NL V ++ + I++ S +
Sbjct: 178 YNQKSDIWALGCVLYELASLKRA-FEAANLPALVLKIMSGTFAP-------ISDRYSPD- 228
Query: 582 MLKLLQVALRCINQSPNERPSMNQV 606
L Q+ L +N P++RP ++Q+
Sbjct: 229 ---LRQLILSMLNLDPSKRPQLSQI 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 6e-06
Identities = 51/212 (24%), Positives = 79/212 (37%), Gaps = 35/212 (16%)
Query: 354 LGRGKHGSLYRVVLDDGLMLA---VKRLRDWSISSED--FKNRMQKIDHVKHPNVLPPLA 408
+G G G + G+ A VK LR + E F +Q + HPNVL L
Sbjct: 3 IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62
Query: 409 YYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRL--RVAACVAKALALIHEELRE 466
LLV E+ P G L N L + + + R+A VA L +H +
Sbjct: 63 QCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QA 119
Query: 467 DGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQT------------------ 508
D I H +L N ++ I +YGL + + + ++ +
Sbjct: 120 DFI-HSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRG 178
Query: 509 SSLKINDISNQMCSTIKADVYGFGVILLELLT 540
L D T K++++ GV + EL T
Sbjct: 179 QDLLPKDQ------TKKSNIWSLGVTMWELFT 204
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 7e-06
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 47/216 (21%)
Query: 354 LGRGKHGSLYRVVL----DDGLMLAVKRLRDWSI-----SSEDFKNRMQKIDHVKHPNVL 404
LG G +G ++ V D G + A+K L+ +I ++E + Q ++ V+ L
Sbjct: 8 LGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFL 67
Query: 405 PPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGS-RLRVAACVAKALALIHE 462
L Y KL L+ +Y G LF L+ E+ F R+ +A V LAL +
Sbjct: 68 VTLHYAFQTDTKLHLILDYVNGGELFTHLYQREH---FTESEVRVYIAEIV---LAL--D 119
Query: 463 ELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS 522
L + GI + ++K NIL ++ ++++GL + FLA+ + + C
Sbjct: 120 HLHQLGIIYRDIKLENILLDSEGHVVLTDFGL------SKEFLAEEE-----ERAYSFCG 168
Query: 523 TIK-----------------ADVYGFGVILLELLTG 541
TI+ D + GV+ ELLTG
Sbjct: 169 TIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 45/217 (20%)
Query: 352 ELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSI-----SSEDFKNRMQKIDHVKHPN 402
++LG G +G ++ V D G + A+K L+ +I ++E + Q ++H++
Sbjct: 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 65
Query: 403 VLPPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIH 461
L L Y KL L+ +Y G LF H S+ + + ++ V LAL
Sbjct: 66 FLVTLHYAFQTDTKLHLILDYINGGELFT--HLSQRERFKEQEVQIYSGEIV---LAL-- 118
Query: 462 EELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMC 521
E L + GI + ++K NIL ++N ++++GL + F + + C
Sbjct: 119 EHLHKLGIIYRDIKLENILLDSNGHVVLTDFGL------SKEFHEDE-----VERAYSFC 167
Query: 522 STIK-----------------ADVYGFGVILLELLTG 541
TI+ D + GV++ ELLTG
Sbjct: 168 GTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 2e-05
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 85 LSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSK 144
LS + VC Q + NN + VS ++S G+N +SG + ++ +
Sbjct: 48 LSNWNSSADVCLWQGITC-----NNSSRVVSIDLS----------GKN-ISGKISSAIFR 91
Query: 145 LNNLKRLDISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNN 202
L ++ +++SNN S +PD + S L NN G IP NL ++SNN
Sbjct: 92 LPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNM 151
Query: 203 LSGPVP 208
LSG +P
Sbjct: 152 LSGEIP 157
|
Length = 968 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 45/201 (22%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 352 ELLGRGKHGSLYR-VVLDDG----LMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVL 404
+LLG G G++++ + + +G + +A+K ++D S + ++ + M + + H ++
Sbjct: 13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIV 72
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
L C LV + P GSL L H ++ S D + + CV A + + L
Sbjct: 73 RLLGI-CPGASLQLVTQLSPLGSL--LDHVRQHRDSLD--PQRLLNWCVQIAKGMYY--L 125
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYG---LIVTENHDQSFLAQTSSLKINDISNQMC 521
E + H NL + NIL ++ I+++G L+ ++ + + +K + + +
Sbjct: 126 EEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILF 185
Query: 522 S--TIKADVYGFGVILLELLT 540
T ++DV+ +GV + E+++
Sbjct: 186 GRYTHQSDVWSYGVTVWEMMS 206
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 30/264 (11%)
Query: 350 PAEL-----LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVL 404
P+EL LG G+ G ++ + +A+K + + ++S EDF + + + HP L
Sbjct: 3 PSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPK-L 61
Query: 405 PPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
L C++Q+ L +V E+ NG L N L + L + V + + E
Sbjct: 62 VQLYGVCTQQKPLYIVTEFMENGCLLNYLR--QRQGKLSKDMLLSMCQDVCEGM----EY 115
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN----DISNQ 519
L + H +L + N L ++ +S++G+ D+ + + + ++ N
Sbjct: 116 LERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNF 175
Query: 520 MCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578
+ K+DV+ FGV++ E+ T GK+ N VV + + + AS
Sbjct: 176 SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-----EVVEM---ISRGFRLYRPKLAS 227
Query: 579 EERMLKLLQVALRCINQSPNERPS 602
+ + +V C ++ P RP+
Sbjct: 228 ----MTVYEVMYSCWHEKPEGRPT 247
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 352 ELLGRGKHGS--LYRVVL--DDGLMLAVKRLRDWSISSED-FKNRMQK--IDHVKHPNVL 404
++LG+G G L R + D G + A+K L+ ++ D + +M++ + V HP ++
Sbjct: 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIV 61
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLR---------VAACVAK 455
L Y +Q G L+ +L G F +RL V +A+
Sbjct: 62 K------------LHYAFQTEGKLYLILDFLRGGDLF---TRLSKEVMFTEEDVKFYLAE 106
Query: 456 -ALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL----IVTENHDQSFLAQTSS 510
ALAL H L GI + +LK NIL + ++++GL I E SF T
Sbjct: 107 LALALDH--LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG-TVE 163
Query: 511 LKINDISNQMCSTIKADVYGFGVILLELLTGKL 543
++ N+ T AD + FGV++ E+LTG L
Sbjct: 164 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSL 196
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 45.9 bits (108), Expect = 3e-05
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLR-DWSISSEDFKNRMQKIDHVKHPNVLPPLAY 409
E +G+G G++Y + + G +A+K++ E N + + K+PN++ L
Sbjct: 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 84
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
Y E +V EY GSL +++ + D G V +AL +H + +
Sbjct: 85 YLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLH----SNQV 136
Query: 470 AHGNLKSNNILFNNNMEPCISEYGL---IVTENHDQSFLAQTSSLKINDISNQMCSTIKA 526
H ++KS+NIL + ++++G I E +S + T ++ + K
Sbjct: 137 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 196
Query: 527 DVYGFGVILLELLTGK 542
D++ G++ +E++ G+
Sbjct: 197 DIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 5e-05
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Query: 92 TSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151
+ +L L L N I+ + EI L L + N + L SLS L NL L
Sbjct: 180 KLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGL 237
Query: 152 DISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208
++SNN + +S L T NNQ+ +NL + ++S N+LS +P
Sbjct: 238 ELSNNKLEDLPESIGNLSNLETLDLSNNQISSISSLGSLTNLRELDLSGNSLSNALP 294
|
Length = 394 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 5e-05
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLR-DWSISSEDFKNRMQKIDHVKHPNVLPPLAY 409
E +G+G G++Y + + G +A+K++ E N + + KHPN++ L
Sbjct: 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDS 84
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
Y E +V EY GSL +++ + D G V +AL +H + +
Sbjct: 85 YLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH----SNQV 136
Query: 470 AHGNLKSNNILFNNNMEPCISEYGL---IVTENHDQSFLAQTSSLKINDISNQMCSTIKA 526
H ++KS+NIL + ++++G I E +S + T ++ + K
Sbjct: 137 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 196
Query: 527 DVYGFGVILLELLTGK 542
D++ G++ +E++ G+
Sbjct: 197 DIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 5e-05
Identities = 43/200 (21%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 354 LGRGKHGSLYR---VVLDDGLML--AVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPP 406
LG G G++Y+ + + + + A+K LR+ + ++++ + + V HP+V+
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74
Query: 407 LAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRE 466
L C + L+ + P G L + + + + L +AK ++ L E
Sbjct: 75 LGI-CLSSQVQLITQLMPLGCLLDYVR--NHKDNIGSQYLLNWCVQIAKGMSY----LEE 127
Query: 467 DGIAHGNLKSNNILFNNNMEPCISEYGLI-VTENHDQSFLAQTSSLKIN-----DISNQM 520
+ H +L + N+L I+++GL + + ++ + A+ + I I +++
Sbjct: 128 KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRI 187
Query: 521 CSTIKADVYGFGVILLELLT 540
T K+DV+ +GV + EL+T
Sbjct: 188 -YTHKSDVWSYGVTVWELMT 206
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 6e-05
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 18/193 (9%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
+G+G+ G + G +AVK L+D S +++ F + ++HPN++ L
Sbjct: 12 ATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVL 70
Query: 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAH 471
+V EY GSL + L S +L A V + + E L E H
Sbjct: 71 QGNPLYIVTEYMAKGSLVDYLR-SRGRAVITLAQQLGFALDVCEGM----EYLEEKNFVH 125
Query: 472 GNLKSNNILFNNNMEPCISEYGLI--VTENHDQSFL----AQTSSLKINDISNQMCSTIK 525
+L + N+L + ++ +S++GL ++ D L +L+ S K
Sbjct: 126 RDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFST------K 179
Query: 526 ADVYGFGVILLEL 538
+DV+ FG++L E+
Sbjct: 180 SDVWSFGILLWEI 192
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 8e-05
Identities = 43/196 (21%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLR-DWSISSEDFKNRMQKIDHVKHPNVLPPLAY 409
E +G+G G++Y + + G +A++++ E N + + K+PN++ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
Y E +V EY GSL +++ + D G V +AL +H + +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH----SNQV 137
Query: 470 AHGNLKSNNILFNNNMEPCISEYGL---IVTENHDQSFLAQTSSLKINDISNQMCSTIKA 526
H ++KS+NIL + ++++G I E +S + T ++ + K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 527 DVYGFGVILLELLTGK 542
D++ G++ +E++ G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 8e-05
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 354 LGRGKHGSLYRV-VLDDGLMLAVKRLRDWSISSEDF-------KNRMQKIDHVKHPNVLP 405
LG G G + V V A+K ++ I K +++ +H P ++
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH---PFIV- 56
Query: 406 PLAYYCSKQEKLLVY---EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHE 462
Y + ++K +Y EY G L+ +L + G ++ +R +A CV A +H
Sbjct: 57 --KLYRTFKDKKYIYMLMEYCLGGELWTILR--DRGLFDEYTARFYIA-CVVLAFEYLHN 111
Query: 463 ELREDGIAHGNLKSNNILFNNN 484
GI + +LK N+L ++N
Sbjct: 112 R----GIIYRDLKPENLLLDSN 129
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 9e-05
Identities = 50/212 (23%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 341 LKFEDLLRAPAELLGRGKHGSLYR-VVLDDG----LMLAVKRLRDWS--ISSEDFKNRMQ 393
LK +L R ++LG G G++Y+ + + +G + +A+K L + + ++ +F +
Sbjct: 4 LKETELKRV--KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 61
Query: 394 KIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACV 453
+ + HP+++ L C LV + P+G L + +H ++ + GS+L + CV
Sbjct: 62 IMASMDHPHLVRLLGV-CLSPTIQLVTQLMPHGCLLDYVHEHKD----NIGSQLLLNWCV 116
Query: 454 AKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI-VTENHDQSFLAQTSSLK 512
A +++ L E + H +L + N+L + I+++GL + E ++ + A +
Sbjct: 117 QIAKGMMY--LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 174
Query: 513 INDISNQMCS----TIKADVYGFGVILLELLT 540
I ++ + T ++DV+ +GV + EL+T
Sbjct: 175 IKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 9e-05
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 353 LLGRGKHGSLYRVVL--DDGLM--LAVKRLRDWSISSEDFKNRMQKIDHVK---HPNVLP 405
+LG+G+ GS+ L +DG +AVK L+ SS D + +++ +K HPNV+
Sbjct: 6 MLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIK 65
Query: 406 PLAYYCSKQEK------LLVYEYQPNGSLFNLLHGSENGQS-FDWGSRLRVAACVAKALA 458
+ + K +++ + +G L L S G+ F + V + A
Sbjct: 66 LIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASG 125
Query: 459 LIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL---IVTENHDQSFLAQTSSLK--- 512
+ E L H +L + N + N NM C++++GL I + ++ + A +K
Sbjct: 126 M--EYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLA 183
Query: 513 INDISNQMCSTIKADVYGFGVILLELLT 540
+ +++ + T +DV+ FGV + E++T
Sbjct: 184 LESLADNV-YTTHSDVWAFGVTMWEIMT 210
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 38/204 (18%)
Query: 356 RGKHGSLY----RVVLDDGLMLAVKRLRDWSISSEDFKNRM------QKIDHVK--HPNV 403
+G GS+Y R G A+K L+ S KN++ + I ++ P V
Sbjct: 6 KGAFGSVYLAKKRST---GDYFAIKVLKK---SDMIAKNQVTNVKAERAIMMIQGESPYV 59
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
+ SK LV EY G +L+ + G DW + A V + +H+
Sbjct: 60 AKLYYSFQSKDYLYLVMEYLNGGDCASLIK-TLGGLPEDWAKQY--IAEVVLGVEDLHQ- 115
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQS----FLAQTSSLKINDIS 517
GI H ++K N+L + ++++GL EN +LA + L + D
Sbjct: 116 ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGD-- 170
Query: 518 NQMCSTIKADVYGFGVILLELLTG 541
++M D + G ++ E L G
Sbjct: 171 DKMS-----DWWSLGCVIFEFLFG 189
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 42/165 (25%), Positives = 62/165 (37%), Gaps = 36/165 (21%)
Query: 397 HVKHPNVLPPLAYYCSKQEK--LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVA 454
+ P V+ YY + +K LV EY P G L +LL N S D A +
Sbjct: 49 QAQSPYVVK--LYYSFQGKKNLYLVMEYLPGGDLASLLE---NVGSLDEDVARIYIAEIV 103
Query: 455 KALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN 514
AL E L +GI H +LK +NIL ++N ++++GL + +N
Sbjct: 104 LAL----EYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGL-------SKVGLVRRQINLN 152
Query: 515 DISNQMCSTI------------------KADVYGFGVILLELLTG 541
D + + D + G IL E L G
Sbjct: 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVG 197
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 65/296 (21%), Positives = 120/296 (40%), Gaps = 61/296 (20%)
Query: 354 LGRGKHGSLYR------VVLDDGLMLAVKRLRDWSISSEDFKNRMQK----IDHVKHPNV 403
+G+G G +++ + + M+AVK L++ + S D + Q+ + HPN+
Sbjct: 13 IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNI 70
Query: 404 LPPLAYYCSKQEKL-LVYEYQPNGSLFNLL-HGSENGQSFDWGSRLRVAA---------- 451
+ L C+ + + L++EY G L L H S Q S
Sbjct: 71 VKLLGV-CAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSC 129
Query: 452 ----CVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQ 507
C+AK +A L E H +L + N L NM I+++GL + + + A
Sbjct: 130 TEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGL----SRN-IYSAD 184
Query: 508 TSSLKIND------------ISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWV 555
ND N+ T ++DV+ +GV+L E+ + + + +
Sbjct: 185 YYKASENDAIPIRWMPPESIFYNRY--TTESDVWAYGVVLWEIFS--------YGMQPY- 233
Query: 556 HSVVREEWTVEVFD-EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMI 610
+ + EE V D VL + + L+L + C ++ P++RPS + ++
Sbjct: 234 YGMAHEEVIYYVRDGNVL---SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRIL 286
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 3e-04
Identities = 55/265 (20%), Positives = 110/265 (41%), Gaps = 31/265 (11%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSE---DFKNRMQKIDHVKHPNVLPPLA 408
ELLG+G G +++ L D +AVK ++ + E F + + + HPN++ +
Sbjct: 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKE-DLPQELKIKFLSEARILKQYDHPNIVKLIG 59
Query: 409 YYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG 468
+Q +V E P G + L ++ + ++ V + A + + E +
Sbjct: 60 VCTQRQPIYIVMELVPGGDFLSFLRKKKD----ELKTKQLVKFALDAAAGMAYLESKN-- 113
Query: 469 IAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDIS-------NQMC 521
H +L + N L N IS++G+ E+ + +S LK I N
Sbjct: 114 CIHRDLAARNCLVGENNVLKISDFGMSRQEDDG---IYSSSGLKQIPIKWTAPEALNYGR 170
Query: 522 STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581
+ ++DV+ +G++L E + + G + RE+ VE + + ++
Sbjct: 171 YSSESDVWSYGILLWETFSLGVCPYPGMT-----NQQAREQ--VEKGYRMSCPQKCPDD- 222
Query: 582 MLKLLQVALRCINQSPNERPSMNQV 606
+ +V RC + P RP +++
Sbjct: 223 ---VYKVMQRCWDYKPENRPKFSEL 244
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 42.4 bits (99), Expect = 4e-04
Identities = 40/196 (20%), Positives = 93/196 (47%), Gaps = 13/196 (6%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLR-DWSISSEDFKNRMQKIDHVKHPNVLPPLAY 409
E +G+G G+++ + + G +A+K++ E N + + +K+PN++ L
Sbjct: 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDS 84
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
+ E +V EY GSL +++ + ++ ++AA + L + E L + +
Sbjct: 85 FLVGDELFVVMEYLAGGSLTDVVTETCMDEA-------QIAAVCRECLQAL-EFLHANQV 136
Query: 470 AHGNLKSNNILFNNNMEPCISEYGL---IVTENHDQSFLAQTSSLKINDISNQMCSTIKA 526
H ++KS+N+L + ++++G I E +S + T ++ + K
Sbjct: 137 IHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 196
Query: 527 DVYGFGVILLELLTGK 542
D++ G++ +E++ G+
Sbjct: 197 DIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 4e-04
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 99 SLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+L L L N + + L L + N L+ P++ S L +L+ LD+S NN
Sbjct: 1 NLKSLDLSNNRL-TVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 158 F 158
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 4e-04
Identities = 58/282 (20%), Positives = 100/282 (35%), Gaps = 63/282 (22%)
Query: 352 ELLGRGKHGSLY--RVVLDDGLMLAVKRLRDWSISSEDFKNRMQKI-------DHVKHPN 402
+ LG G S Y R V LM AVK++ +S + + ++ + + HP+
Sbjct: 6 QQLGTGAFSSCYQARDVKTGTLM-AVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPH 64
Query: 403 VLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHE 462
++ L C L E+ GS+ +LL +F + + + L+ +H
Sbjct: 65 IIRMLGATCEDSHFNLFVEWMAGGSVSHLLS---KYGAFKEAVIINYTEQLLRGLSYLH- 120
Query: 463 ELREDGIAHGNLKSNNILFNNNMEPC-ISEYGLIVTENHDQSFLAQTSSLKINDISNQMC 521
E+ I H ++K N+L ++ + I+++G + Q+
Sbjct: 121 ---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK---GTGAGEFQ-----GQLL 169
Query: 522 STI---------------KADVYGFGVILLELLTGKLVQN-----NGFNLATWVHSVVRE 561
TI DV+ G +++E+ T K N N L
Sbjct: 170 GTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLAL---------- 219
Query: 562 EWTVEVFDEVLIAEAASEERMLK--LLQVALRCINQSPNERP 601
+F A S L L V LRC+ P +RP
Sbjct: 220 -----IFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRP 256
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 39/205 (19%)
Query: 354 LGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK---HPNVLPPLAY 409
+G G +G +Y+ L G + AVK ++ +DF Q+I VK H N++
Sbjct: 17 VGSGTYGDVYKARNLHTGELAAVKIIK--LEPGDDFSLIQQEIFMVKECKHCNIVAYFGS 74
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWG--SRLRVA-AC--VAKALALIHEEL 464
Y S+++ + EY GSL ++ H + G S L++A C + LA +H +
Sbjct: 75 YLSREKLWICMEYCGGGSLQDIYHVT--------GPLSELQIAYVCRETLQGLAYLHSK- 125
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYG----LIVTENHDQSFLA-------QTSSLKI 513
G H ++K NIL +N + ++++G + T +SF+ + ++++
Sbjct: 126 ---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEK 182
Query: 514 NDISNQMCSTIKADVYGFGVILLEL 538
N NQ+C D++ G+ +EL
Sbjct: 183 NGGYNQLC-----DIWAVGITAIEL 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 48/170 (28%), Positives = 70/170 (41%), Gaps = 27/170 (15%)
Query: 386 EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEK---LLVYEYQPNGSLF---NLLHGS--EN 437
E K + + +KHPN+ + ++ S QE +V EY G L N G
Sbjct: 44 EASKKEVILLAKMKHPNI---VTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSE 100
Query: 438 GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNI-LFNNNMEPCISEYGLIV 496
Q W V +L L H R+ I H ++KS NI L N M + ++G+
Sbjct: 101 DQILSW--------FVQISLGLKHIHDRK--ILHRDIKSQNIFLSKNGMVAKLGDFGIAR 150
Query: 497 TENHDQSFLAQTSSLKINDISNQMCSTI----KADVYGFGVILLELLTGK 542
N D LA T +S ++C K D++ G +L EL T K
Sbjct: 151 QLN-DSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLK 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 25/168 (14%)
Query: 448 RVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQ 507
++A + KAL +H +L + H ++K +N+L N N + + ++G+ + +A+
Sbjct: 107 KIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGI---SGYLVDSVAK 160
Query: 508 TSSL---------KINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV 558
T +IN NQ +K+DV+ G+ ++EL TG+ F +W
Sbjct: 161 TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGR------FPYDSWKTPF 214
Query: 559 VREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
+ + VE L AE S E +C+ ++ ERP+ ++
Sbjct: 215 QQLKQVVEEPSPQLPAEKFSPE----FQDFVNKCLKKNYKERPNYPEL 258
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 7e-04
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 354 LGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNR---MQKIDHVK---HPNVLPP 406
+G+G+ +Y+ + L DG ++A+K+++ + + D K R +++ID +K HPNV+
Sbjct: 10 IGKGQFSVVYKAICLLDGRVVALKKVQIFEMM--DAKARQDCLKEIDLLKQLDHPNVIKY 67
Query: 407 LAYYCSKQEKLLVYEYQPNGSLFNLL-HGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
LA + E +V E G L ++ H + + + + + AL +H +
Sbjct: 68 LASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR- 126
Query: 466 EDGIAHGNLKSNNILFNNN 484
I H ++K N+
Sbjct: 127 ---IMHRDIKPANVFITAT 142
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 8e-04
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
Query: 385 SEDFKNRMQKIDHVKHPNVLPPLAY-YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDW 443
S F + + H +++ Y C + E ++V EY G L LH +N S W
Sbjct: 45 SLAFFETASLMSQLSHKHLV--KLYGVCVRDENIMVEEYVKFGPLDVFLHREKNNVSLHW 102
Query: 444 GSRLRVAACVAKALALIHEELREDGIAHGNLKSNNIL 480
+L VA +A AL L + + HGN+ NIL
Sbjct: 103 --KLDVAKQLASALHY----LEDKKLVHGNVCGKNIL 133
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 8e-04
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 352 ELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSISSE--DFKNRMQKIDHVKHPNVLP 405
+++G G+ G ++R +L + +A+K L+ + DF + + H N++
Sbjct: 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIR 70
Query: 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENG-QSFDWGSRLRVAACVAKALALIHEEL 464
+ +++ EY NG+L L + S+ LR A K L+
Sbjct: 71 LEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS------ 124
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISNQMCS 522
+ H +L + NIL N+N+E +S++GL ++ ++ + ++ + I + + +
Sbjct: 125 -DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIA 183
Query: 523 ----TIKADVYGFGVILLELLT 540
T +DV+ FG+++ E+++
Sbjct: 184 YRKFTSASDVWSFGIVMWEVMS 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 9e-04
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 25/195 (12%)
Query: 368 DDGLMLAVKRLRDWSISSED----FKNRMQKIDHVKHPNVLPPLAYYCSKQEKLL-VYEY 422
G +A+K LR + E F+ + HPN++ L + L V+EY
Sbjct: 1 MTGHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEY 60
Query: 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN 482
P +L +L + G R+ V ALA H + GI H +LK NI+ +
Sbjct: 61 VPGRTLREVL---AADGALPAGETGRLMLQVLDALACAHNQ----GIVHRDLKPQNIMVS 113
Query: 483 -NNMEPC--ISEYGLIVTENHDQSFLAQTSSLKINDI-SNQMCS---------TIKADVY 529
+ P + ++G+ + T + + + C+ T +D+Y
Sbjct: 114 QTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLY 173
Query: 530 GFGVILLELLTGKLV 544
+G+I LE LTG+ V
Sbjct: 174 AWGLIFLECLTGQRV 188
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 39/209 (18%)
Query: 354 LGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPLAY 409
LG G G + +V+ G ++AVK +R I+ K ++++D P ++
Sbjct: 9 LGAGNSGVVSKVLHRPTGKIMAVKTIR-LEINEAIQKQILRELDILHKCNSPYIVGFYGA 67
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
+ + + + EY GSL +L + ++ VA V K L +HE+ I
Sbjct: 68 FYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVA--VLKGLTYLHEKH---KI 122
Query: 470 AHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQM--CS----- 522
H ++K +NIL N+ + + ++G+ S +N ++ S
Sbjct: 123 IHRDVKPSNILVNSRGQIKLCDFGV--------------SGQLVNSLAKTFVGTSSYMAP 168
Query: 523 --------TIKADVYGFGVILLELLTGKL 543
++K+D++ G+ L+EL TG+
Sbjct: 169 ERIQGNDYSVKSDIWSLGLSLIELATGRF 197
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.001
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 354 LGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPLAYY 410
LG G G +Y+ + +LA ++ D + S E+ ++ M +ID HPN++ L +
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVID-TKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71
Query: 411 CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470
+ ++ E+ G++ ++ E + ++RV C AL + L E+ I
Sbjct: 72 YYENNLWILIEFCAGGAVDAVMLELERPLT---EPQIRVV-CKQTLEALNY--LHENKII 125
Query: 471 HGNLKSNNILFNNNMEPCISEYGLIV----TENHDQSFLAQTSSLKINDISNQMCST--- 523
H +LK+ NILF + + ++++G+ T SF+ + + MC T
Sbjct: 126 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVV---MCETSKD 182
Query: 524 ----IKADVYGFGVILLEL 538
KADV+ G+ L+E+
Sbjct: 183 RPYDYKADVWSLGITLIEM 201
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.002
Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 24/261 (9%)
Query: 353 LLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLA 408
LG+G +GS+Y+V L D A+K + S+S ED N ++ + V HPN++
Sbjct: 7 KLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKE 66
Query: 409 YYCSKQEKLLVYEYQPNGSLFNLL-HGSENGQSFDWGSRLRVAACVAKALALIHEELRED 467
+ + +V EY P G L + + + R+ + + L +HE+
Sbjct: 67 AFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---- 122
Query: 468 GIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISNQMCSTIK 525
I H +LKS NIL N I + G+ ++ +N ++ + T ++ + K
Sbjct: 123 KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIG-TPHYMAPEVWKGRPYSYK 181
Query: 526 ADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585
+D++ G +L E+ T ++ + V R ++ I S++ L
Sbjct: 182 SDIWSLGCLLYEMATFA-PPFEARSMQDLRYKVQRGKYPP-------IPPIYSQD----L 229
Query: 586 LQVALRCINQSPNERPSMNQV 606
+ P RP+ +++
Sbjct: 230 QNFIRSMLQVKPKLRPNCDKI 250
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.002
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 43/212 (20%)
Query: 354 LGRGKHG--SLYRVVL---DDGLMLAVKRLR--DWSISSEDFKNRMQKIDHVKHPNVLPP 406
LG G G SLY G M+AVK L+ ++ +K + + + H N++
Sbjct: 12 LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVK- 70
Query: 407 LAYY---CSKQ-EK--LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALI 460
Y CS+Q K L+ EY P GSL + L + L A + + +A +
Sbjct: 71 ---YKGCCSEQGGKGLQLIMEYVPLGSLRDYL----PKHKLNLAQLLLFAQQICEGMAYL 123
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI-----------VTENHDQS-FLAQT 508
H + H +L + N+L +N+ I ++GL V E+ D F
Sbjct: 124 HSQ----HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAV 179
Query: 509 SSLKINDISNQMCSTIKADVYGFGVILLELLT 540
LK N S +DV+ FGV L ELLT
Sbjct: 180 ECLKENKFS------YASDVWSFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 60/281 (21%), Positives = 113/281 (40%), Gaps = 41/281 (14%)
Query: 352 ELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSISS--EDFKNRMQKIDHVKHPNV 403
E LG + G +Y+ L + +A+K L+D + E+FK+ ++HPN+
Sbjct: 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNI 70
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLL-----H---GSENG-----QSFDWGSRLRVA 450
+ L +Q +++ Y + L L H GS + + + + +
Sbjct: 71 VCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIV 130
Query: 451 ACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI-VTENHDQSFLAQTS 509
+A + E L + H +L + N+L + + IS+ GL D L S
Sbjct: 131 TQIAAGM----EFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNS 186
Query: 510 SLKINDISNQMCS----TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV 565
L I +S + +I +D++ +GV+L E+ + L G++ V ++R
Sbjct: 187 LLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD-VIEMIRNR--- 242
Query: 566 EVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
+VL + L+ L C N+ P+ RP +
Sbjct: 243 ----QVLPCPDDCPAWVYTLM---LECWNEFPSRRPRFKDI 276
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 354 LGRGKHGSLYRVVL---DDGLMLAVKRLRDWSISS----EDFKNRMQKIDHVKHPNVLPP 406
LG G+ GS+ L D L +AVK ++ +I + EDF + + HPNV+
Sbjct: 7 LGEGEFGSVMEGQLNQDDSILKVAVKTMK-IAICTRSEMEDFLSEAVCMKEFDHPNVMRL 65
Query: 407 LAYYCSKQEK------LLVYEYQPNGSLFNLLHGSENG---QSFDWGSRLRVAACVAKAL 457
+ E +++ + +G L + L S G Q ++ +A +
Sbjct: 66 IGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGM 125
Query: 458 ALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT-ENHDQSFLAQTSSLKINDI 516
E L H +L + N + N NM C++++GL N D + + + + I
Sbjct: 126 ----EYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWI 181
Query: 517 SNQMCS----TIKADVYGFGVILLELLT 540
+ + + T K+DV+ FGV + E+ T
Sbjct: 182 AIESLADRVYTTKSDVWSFGVTMWEIAT 209
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 354 LGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKI---DHVKHPNVLPPLAY 409
+G G +G +Y+ ++ G + A+K ++ EDF Q+I KH N++
Sbjct: 17 IGSGTYGDVYKARNVNTGELAAIKVIK--LEPGEDFAVVQQEIIMMKDCKHSNIVAYFGS 74
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
Y + + + E+ GSL ++ H + S ++A + L ++ L G
Sbjct: 75 YLRRDKLWICMEFCGGGSLQDIYHVTGP------LSESQIAYVSRETLQGLY-YLHSKGK 127
Query: 470 AHGNLKSNNILFNNNMEPCISEYG----LIVTENHDQSFLA-------QTSSLKINDISN 518
H ++K NIL +N ++++G + T +SF+ + ++++ N
Sbjct: 128 MHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYN 187
Query: 519 QMCSTIKADVYGFGVILLEL 538
Q+C D++ G+ +EL
Sbjct: 188 QLC-----DIWAVGITAIEL 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.002
Identities = 55/247 (22%), Positives = 96/247 (38%), Gaps = 49/247 (19%)
Query: 319 TSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKR 377
S S ++SSS S+ +L R +G G G++Y+V+ G + A+K
Sbjct: 50 PSSSSSSSSSS-SASGSAPSAAKSLSELERV--NRIGSGAGGTVYKVIHRPTGRLYALKV 106
Query: 378 LRDWSISSEDFKNRMQK----IDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLH 433
+ + + + ++ + + V HPNV+ + E ++ E+ GSL
Sbjct: 107 I--YGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSL----- 159
Query: 434 GSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---------- 483
E D VA + +A +H I H ++K +N+L N+
Sbjct: 160 --EGTHIADEQFLADVARQILSGIAYLHRR----HIVHRDIKPSNLLINSAKNVKIADFG 213
Query: 484 -------NMEPCISEYGLIVTENHDQSFLAQTSSLKIN-DISNQMCSTIKADVYGFGVIL 535
M+PC S G I A S +IN D+++ D++ GV +
Sbjct: 214 VSRILAQTMDPCNSSVGTI----------AYMSPERINTDLNHGAYDGYAGDIWSLGVSI 263
Query: 536 LELLTGK 542
LE G+
Sbjct: 264 LEFYLGR 270
|
Length = 353 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 51/278 (18%), Positives = 103/278 (37%), Gaps = 32/278 (11%)
Query: 353 LLGRGKHGSLYRVVL------DDGLMLAVKRL--RDWSISSEDFKNRMQKIDHVKHPNVL 404
LGRG+ G ++ ++ VK L +F+ + + H NV+
Sbjct: 12 TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVV 71
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKA--LALIHE 462
L + ++ EY G L L +++ L VA +AL +
Sbjct: 72 RLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMD 131
Query: 463 ELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS 522
L H +L + N L ++ E +S L + + + + + + + ++ +
Sbjct: 132 HLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQ 191
Query: 523 ----TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD----EVLIA 574
+ K+DV+ FGV++ E+ F + +E + E+ +
Sbjct: 192 EDDFSTKSDVWSFGVLMWEV----------FTQGELPFYGLSDEEVLNRLQAGKLELPVP 241
Query: 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612
E R+ KL+ RC +P +RPS +++ +
Sbjct: 242 EGCP-SRLYKLMT---RCWAVNPKDRPSFSELVSALGE 275
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 35.8 bits (83), Expect = 0.003
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 11/45 (24%)
Query: 29 KRALVQFMEKLSVGNAARDPNW---GWN-RSSDPCSGKWVGVTCD 69
+ AL+ F K S+ DP+ WN SSDPCS W GVTCD
Sbjct: 5 RDALLAF--KSSLNG---DPSGALSSWNPSSSDPCS--WTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.004
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 18/148 (12%)
Query: 342 KFEDLLRAPAELLGRGKHGSLYRV-VLDDGLMLAVKRLRDWSISSEDFKNRMQK----ID 396
K+E L ++G G +G + + G ++A+K+ ++ S ED K + +
Sbjct: 2 KYEVL-----GVVGEGAYGVVLKCRNKATGEIVAIKKFKE-SEDDEDVKKTALREVKVLR 55
Query: 397 HVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKA 456
++H N++ + K LV+EY +L LL S G D +A
Sbjct: 56 QLRHENIVNLKEAFRRKGRLYLVFEYVER-TLLELLEASPGGLPPDAVRSYIWQLL--QA 112
Query: 457 LALIHEELREDGIAHGNLKSNNILFNNN 484
+A H I H ++K NIL + +
Sbjct: 113 IAYCHSH----NIIHRDIKPENILVSES 136
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.004
Identities = 51/241 (21%), Positives = 102/241 (42%), Gaps = 39/241 (16%)
Query: 387 DFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSR 446
DF + + HPN++ + ++V EY NGSL L +GQ
Sbjct: 51 DFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLR-KHDGQ------- 102
Query: 447 LRVAACVA--KALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQ 502
V V + +A + L + G H +L + NIL N+N+ +S++GL ++ ++ +
Sbjct: 103 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 162
Query: 503 SFLAQTSSLKINDISNQMCS----TIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHS 557
++ + + I + + + T +DV+ +G+++ E+++ G+
Sbjct: 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE--------------- 207
Query: 558 VVREEWTVEVFDEVLIAE-----AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612
R W + D + E A + L Q+ L C + NERP Q+ +++
Sbjct: 208 --RPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265
Query: 613 I 613
+
Sbjct: 266 L 266
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 626 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.98 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.98 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.98 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.98 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.97 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.97 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.97 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.97 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.97 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.97 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.97 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.97 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.96 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.96 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.96 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.96 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.95 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.95 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.95 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.95 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.95 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.94 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.94 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.94 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.94 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.94 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.94 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.92 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.91 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.9 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.88 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.87 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.86 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.84 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.84 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.83 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.83 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.83 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.83 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.82 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.81 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.79 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.79 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.77 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.75 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.75 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.74 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.74 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.73 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.72 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.72 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.71 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.7 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.7 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.69 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.63 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.63 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.59 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.58 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.58 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.45 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.39 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.31 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.3 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.29 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.27 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.22 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.17 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.14 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.1 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.1 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.1 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.09 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.09 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.09 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.06 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.03 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.03 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 98.97 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 98.89 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 98.89 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.87 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.87 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 98.87 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.85 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 98.85 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.8 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.8 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.8 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 98.79 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.77 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 98.75 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.74 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 98.68 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.67 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 98.59 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 98.57 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.57 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.56 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.54 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.54 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 98.5 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 98.47 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.46 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.35 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.26 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.26 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.25 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 98.25 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.24 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.2 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.15 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 98.13 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.11 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.07 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 97.96 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 97.91 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 97.89 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.88 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 97.86 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 97.83 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 97.81 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 97.78 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 97.75 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 97.75 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-60 Score=568.00 Aligned_cols=486 Identities=25% Similarity=0.425 Sum_probs=355.0
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.|+|++|.+.|.+|. ....++|+.|+|++|+++|.+|..+.++++|+.|+|++|+++|.+|..+.++++|++|+|
T Consensus 453 ~L~~L~L~~n~~~~~~p~--~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 530 (968)
T PLN00113 453 SLQMLSLARNKFFGGLPD--SFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDL 530 (968)
T ss_pred CCcEEECcCceeeeecCc--ccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEEC
Confidence 466677777777776653 334578999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCC--CCCCcccCCCCCCCCCCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGV--NGRLGADSFSGNPGLCGK 228 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~--~~~~~~~~~~gn~~lcg~ 228 (626)
++|.++|.+|. +..+++|+.|++++|+++|.+|.. .+++|+.|++++|+++|.+|.. +..+...+|.||+++||.
T Consensus 531 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~ 610 (968)
T PLN00113 531 SHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGG 610 (968)
T ss_pred CCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCC
Confidence 99999999997 899999999999999999999974 5889999999999999999975 346677889999999985
Q ss_pred CCC---CCCCCCCCCCCCCCCCCCCceeeeehhhHHHHHHHHHHH-HHhhhhccccccccccchhhhhcccccCcccccc
Q 006903 229 PLP---NACPPTPPPIKESKGSSTNQVFLFSGYILLGLFILLLVV-LKLVSKNKQKEEKTDVIKKEVALDINSNKRSSIS 304 (626)
Q Consensus 229 ~~~---~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (626)
+.. ++|.. ..... ..++++++++++++++++++ .++++|++++.+. ...+.+ .. .
T Consensus 611 ~~~~~~~~c~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~---~---- 669 (968)
T PLN00113 611 DTTSGLPPCKR--------VRKTP-SWWFYITCTLGAFLVLALVAFGFVFIRGRNNLEL-KRVENE----DG---T---- 669 (968)
T ss_pred ccccCCCCCcc--------ccccc-eeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccc-cccccc----cc---c----
Confidence 432 22321 00111 11222222222222222222 2222222221110 000000 00 0
Q ss_pred ccccCCCCCCcccccccCCCCCCcceEEeecccccccchhhhhcc--cccccccCCCcceEEEEe-CCCcEEEEEEcCCC
Q 006903 305 SVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRA--PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDW 381 (626)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~ 381 (626)
+... .........++++++... ..++||+|+||.||+|+. .++..||||+++..
T Consensus 670 -----------~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~ 726 (968)
T PLN00113 670 -----------WELQ------------FFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDV 726 (968)
T ss_pred -----------cccc------------ccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCC
Confidence 0000 000000112334444332 246899999999999985 67999999998754
Q ss_pred CCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 006903 382 SISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIH 461 (626)
Q Consensus 382 ~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH 461 (626)
... ...|++.+++++|||||+++|+|.+++..++||||+++|+|.++++ .++|..+.+++.|+++||+|||
T Consensus 727 ~~~---~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH 797 (968)
T PLN00113 727 NSI---PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLH 797 (968)
T ss_pred ccc---cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhc
Confidence 322 2356888999999999999999999999999999999999999995 3899999999999999999999
Q ss_pred HhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcC
Q 006903 462 EELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTG 541 (626)
Q Consensus 462 ~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg 541 (626)
+.+ +++|+||||||+||+++.++.+++. ||......... ...++..|+|||......++.|+|||||||++|||+||
T Consensus 798 ~~~-~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg 874 (968)
T PLN00113 798 CRC-SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDT-KCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTG 874 (968)
T ss_pred cCC-CCCeecCCCCHHhEEECCCCceEEE-eccccccccCC-CccccccccCcccccCCCCCcccchhhHHHHHHHHHhC
Confidence 654 5789999999999999999988876 66544322221 22457789999998888899999999999999999999
Q ss_pred CCCCCC----CcchhHHHHHHhhcccccccccHHHHhh-hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 542 KLVQNN----GFNLATWVHSVVREEWTVEVFDEVLIAE-AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 542 ~~p~~~----~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+.|++. .....+|.+............|+.+... ....+++.++.+++.+||+.||++||||+||+++|+++...
T Consensus 875 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 875 KSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred CCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 999853 2345556554433332233344433221 23345677899999999999999999999999999998654
Q ss_pred c
Q 006903 617 E 617 (626)
Q Consensus 617 ~ 617 (626)
.
T Consensus 955 ~ 955 (968)
T PLN00113 955 S 955 (968)
T ss_pred c
Confidence 3
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-53 Score=439.98 Aligned_cols=278 Identities=34% Similarity=0.595 Sum_probs=242.0
Q ss_pred cccccchhhhhccc-----ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC-HHHHHHHHHHhccCCCCCccccceEE
Q 006903 337 KVNKLKFEDLLRAP-----AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS-SEDFKNRMQKIDHVKHPNVLPPLAYY 410 (626)
Q Consensus 337 ~~~~~~~~~l~~~~-----~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~~~ei~~l~~l~H~nIv~l~g~~ 410 (626)
....++++++..++ .++||+|+||.||+|.+++|+.||||++...... ..+|.+|++++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 34568888888875 4789999999999999999999999998876654 66799999999999999999999999
Q ss_pred EeCC-eEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEE
Q 006903 411 CSKQ-EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCI 489 (626)
Q Consensus 411 ~~~~-~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl 489 (626)
.+.+ +.+||||||++|+|.++|+..... +++|..|++||.++|+||+|||+.+ .+.||||||||+|||||+++++||
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~-~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGC-PPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCC-CCCEecCCCCHHHeeECCCCCEEc
Confidence 9988 599999999999999999875443 8999999999999999999999877 457999999999999999999999
Q ss_pred eeccCccccCC-Ccccc---ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCC-----CcchhHHHHHHhh
Q 006903 490 SEYGLIVTENH-DQSFL---AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNN-----GFNLATWVHSVVR 560 (626)
Q Consensus 490 ~DFGl~~~~~~-~~~~~---~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~-----~~~~~~~~~~~~~ 560 (626)
+|||+++.... ..... .++..|++||.......+.|+|||||||+|+||+||+.+.+. ...+.+|......
T Consensus 219 sDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 219 SDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE 298 (361)
T ss_pred cCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence 99999976554 33222 688899999999888889999999999999999999987762 3357889888888
Q ss_pred cccccccccHHHHhhhccH-HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 561 EEWTVEVFDEVLIAEAASE-ERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 561 ~~~~~~~~d~~~~~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.....+++|+.+....... +++.++.+++.+|++.+|++||+|.||+++|+.+...
T Consensus 299 ~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 8788899999887433333 6888999999999999999999999999999776543
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-47 Score=395.35 Aligned_cols=259 Identities=27% Similarity=0.403 Sum_probs=215.0
Q ss_pred ccchhhhhcccccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCC-e
Q 006903 340 KLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ-E 415 (626)
Q Consensus 340 ~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~-~ 415 (626)
.+..+++.. .+.||+|+||+||+|.+.....||||++...... .++|.+|+.+|.+++|||||+++|+|.... .
T Consensus 37 ~i~~~~l~~--~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~ 114 (362)
T KOG0192|consen 37 EIDPDELPI--EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGS 114 (362)
T ss_pred ecChHHhhh--hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 344444433 3569999999999999975555999999876543 358999999999999999999999999887 7
Q ss_pred EEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC-ceeccCCCCCeeeCCCC-CeEEeecc
Q 006903 416 KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG-IAHGNLKSNNILFNNNM-EPCISEYG 493 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~-ivHrDlkp~NILl~~~~-~~kl~DFG 493 (626)
.++|||||++|+|.++++.. ....+++..++++|.|||+||.||| +.+ ||||||||+|||++.++ ++||+|||
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH----~~~~iIHrDLK~~NiLv~~~~~~~KI~DFG 189 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLH----SEGPIIHRDLKSDNILVDLKGKTLKIADFG 189 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHh----cCCCeeecccChhhEEEcCCCCEEEECCCc
Confidence 99999999999999999853 3568999999999999999999999 566 99999999999999997 99999999
Q ss_pred CccccC---CCccccccccccchhhccc--cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 494 LIVTEN---HDQSFLAQTSSLKINDISN--QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 494 l~~~~~---~~~~~~~~~~~~~~pe~~~--~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
+++... ...+...||..|||||++. ...++.|+|||||||++|||+||+.||.+... .+....+........+
T Consensus 190 lsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~Rp~~- 267 (362)
T KOG0192|consen 190 LSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLRPPI- 267 (362)
T ss_pred cceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCCCCC-
Confidence 997644 3334467899999999998 56899999999999999999999999986655 4444444433322221
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+.++...+..++.+||+.||++||++.+++..|+.+...
T Consensus 268 ---------p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 268 ---------PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH 306 (362)
T ss_pred ---------CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence 222455688889999999999999999999999988654
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-46 Score=384.79 Aligned_cols=250 Identities=22% Similarity=0.353 Sum_probs=216.5
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|.||.||.|.+.....||+|.++......++|.+|+++|++++|+|||+++|+|..++..+||||||+.|+|.+
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~ 290 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLD 290 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHH
Confidence 47899999999999999888899999999888888999999999999999999999999999889999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccc----cc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF----LA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~----~~ 506 (626)
+|+. ..+..+...+.+.++.|||+|++||+ ++++|||||.++|||++++..+||+|||+++....+... ..
T Consensus 291 yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLe----s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~k 365 (468)
T KOG0197|consen 291 YLRT-REGGLLNLPQLLDFAAQIAEGMAYLE----SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGK 365 (468)
T ss_pred Hhhh-cCCCccchHHHHHHHHHHHHHHHHHH----hCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCC
Confidence 9985 34567899999999999999999999 789999999999999999999999999999954433321 12
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
-+..|.|||.+....++.|||||||||+||||+| |+.|+ .+....+.+..+.++.... .++.|+..+
T Consensus 366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py-~~msn~ev~~~le~GyRlp-----------~P~~CP~~v 433 (468)
T KOG0197|consen 366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPY-PGMSNEEVLELLERGYRLP-----------RPEGCPDEV 433 (468)
T ss_pred CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCC-CCCCHHHHHHHHhccCcCC-----------CCCCCCHHH
Confidence 3456889999999999999999999999999999 55554 4667777776666554332 344566779
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.++|..||+.+|++|||++.+...|+.+....
T Consensus 434 Y~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 434 YELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred HHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 99999999999999999999999999887543
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=364.71 Aligned_cols=250 Identities=23% Similarity=0.325 Sum_probs=207.2
Q ss_pred cchhhhhcccccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCC-eE
Q 006903 341 LKFEDLLRAPAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ-EK 416 (626)
Q Consensus 341 ~~~~~l~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~-~~ 416 (626)
++..|+.+ .+.||+|..|+|||+++ .+++.+|+|.+.... ...+++.+|++++++.+||+||+++|.|..+. +.
T Consensus 76 i~~~dle~--~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~i 153 (364)
T KOG0581|consen 76 ISLSDLER--LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEI 153 (364)
T ss_pred cCHHHhhh--hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceE
Confidence 55566644 38899999999999995 578999999995433 34578999999999999999999999999998 59
Q ss_pred EEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 417 LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 417 ~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
.++||||.+|+|++++.. .+.+++...-+|+.+|++||.|||+ +++||||||||+|||++..|++||||||.++
T Consensus 154 sI~mEYMDgGSLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh~---~~~IIHRDIKPsNlLvNskGeVKicDFGVS~ 227 (364)
T KOG0581|consen 154 SICMEYMDGGSLDDILKR---VGRIPEPVLGKIARAVLRGLSYLHE---ERKIIHRDIKPSNLLVNSKGEVKICDFGVSG 227 (364)
T ss_pred EeehhhcCCCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhh---ccCeeeccCCHHHeeeccCCCEEeccccccH
Confidence 999999999999999963 3568999999999999999999995 4789999999999999999999999999986
Q ss_pred ccCC-CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCC----cchhHHHHHHhhcccccccccHH
Q 006903 497 TENH-DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNG----FNLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 497 ~~~~-~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~----~~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
.... ......||..||+||.+.+..|+.++||||||++++|+++|+.|+... .+..+.+..+..+... .
T Consensus 228 ~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP------~ 301 (364)
T KOG0581|consen 228 ILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPP------R 301 (364)
T ss_pred HhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCC------C
Confidence 5433 334567899999999999999999999999999999999999998643 2344444444433211 1
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
++.. .+.+++..++..|+++||.+|||++|+++
T Consensus 302 lP~~----~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 302 LPEG----EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCcc----cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1111 24556899999999999999999999976
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-44 Score=389.45 Aligned_cols=252 Identities=22% Similarity=0.380 Sum_probs=212.2
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||+||+|+.. +.+.||||.+++... .+++|++|+++++.++|||||+|+|.|..++..++|+||
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEY 570 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEY 570 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEe
Confidence 478999999999999842 457899999998764 457999999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCC-------CC----CCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEee
Q 006903 423 QPNGSLFNLLHGSEN-------GQ----SFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISE 491 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~-------~~----~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~D 491 (626)
|..|||.++|+.... +. +++-.+.+.||.|||.|+.||- ++.+|||||.++|+|+.++..+||+|
T Consensus 571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs----~~~FVHRDLATRNCLVge~l~VKIsD 646 (774)
T KOG1026|consen 571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS----SHHFVHRDLATRNCLVGENLVVKISD 646 (774)
T ss_pred cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH----hCcccccchhhhhceeccceEEEecc
Confidence 999999999974321 22 3889999999999999999998 67899999999999999999999999
Q ss_pred ccCccccCCCcccccc-----ccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccc
Q 006903 492 YGLIVTENHDQSFLAQ-----TSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTV 565 (626)
Q Consensus 492 FGl~~~~~~~~~~~~~-----~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 565 (626)
||+++......++..+ +..||+||.+.+..+|++||||||||||||++| |+.|+. +....+.+..+..... .
T Consensus 647 fGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~-glSn~EVIe~i~~g~l-L 724 (774)
T KOG1026|consen 647 FGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYY-GLSNQEVIECIRAGQL-L 724 (774)
T ss_pred cccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccc-ccchHHHHHHHHcCCc-c
Confidence 9999875544433322 456899999999999999999999999999999 777775 4455555544433321 1
Q ss_pred ccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 566 EVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 566 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
..++.++.++++||..||+.+|++||+++||-..|+.......
T Consensus 725 ----------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 725 ----------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred ----------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 2556778889999999999999999999999999998765443
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-43 Score=350.46 Aligned_cols=198 Identities=22% Similarity=0.295 Sum_probs=173.1
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
..||+|+||+||+|++ +++..||||.+.+... ..+-...|+.+|+.++|||||.+++++..++..|+|||||.+||
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGD 95 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGD 95 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCC
Confidence 4599999999999995 5689999999987643 33567899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC------CCeEEeeccCccccCCC
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN------MEPCISEYGLIVTENHD 501 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~------~~~kl~DFGl~~~~~~~ 501 (626)
|.+|++.. ..++......++.|+|.||++|| +++||||||||+||||+.. -.+||+|||+|+.....
T Consensus 96 Ls~yi~~~---~~l~e~t~r~Fm~QLA~alq~L~----~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 96 LSDYIRRR---GRLPEATARHFMQQLASALQFLH----ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred HHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 99999743 47899999999999999999999 7899999999999999865 45799999999876543
Q ss_pred c--cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHH
Q 006903 502 Q--SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHS 557 (626)
Q Consensus 502 ~--~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~ 557 (626)
. ...+|++.|||||+.....|+.|+|+||.|+++||+++|+.||+.. ...+....
T Consensus 169 ~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~-t~~eL~~~ 225 (429)
T KOG0595|consen 169 SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE-TPKELLLY 225 (429)
T ss_pred hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc-CHHHHHHH
Confidence 2 4578999999999999999999999999999999999999999743 34444443
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-43 Score=366.53 Aligned_cols=238 Identities=21% Similarity=0.358 Sum_probs=206.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+++||+|||+.||.++. .+|+.||+|++.+.. ...+...+||++.+.|+|||||+++++|++.+..|||.|+|.+
T Consensus 23 g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~ 102 (592)
T KOG0575|consen 23 GRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHR 102 (592)
T ss_pred eeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCC
Confidence 58999999999999995 889999999997643 3457799999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|..+++ ..+++++.++..+..||+.||.||| +++|+|||||-.|++|++++++||+|||||.... +..
T Consensus 103 ~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH----~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk 175 (592)
T KOG0575|consen 103 GSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLH----SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERK 175 (592)
T ss_pred ccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHH----hcCceecccchhheeecCcCcEEecccceeeeecCccccc
Confidence 99999996 3468999999999999999999999 7899999999999999999999999999997654 344
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
...+||+-|.|||+.....++..+||||+|||+|.|++|++||.. .++.+....+...++.. +....
T Consensus 176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet-k~vkety~~Ik~~~Y~~------------P~~ls 242 (592)
T KOG0575|consen 176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET-KTVKETYNKIKLNEYSM------------PSHLS 242 (592)
T ss_pred ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc-chHHHHHHHHHhcCccc------------ccccC
Confidence 668999999999999988899999999999999999999999974 34555555555444332 11223
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....+|+.++|+.||.+|||+++|+.
T Consensus 243 ~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 243 AEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 34778899999999999999999976
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=351.85 Aligned_cols=244 Identities=18% Similarity=0.302 Sum_probs=200.8
Q ss_pred cccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC--------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI--------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~--------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
..+.||+|+||.|-+|. ..+|+.||||++++... ......+|+++|++++|||||+++++|..++..|+||
T Consensus 176 i~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVl 255 (475)
T KOG0615|consen 176 ISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVL 255 (475)
T ss_pred eeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEE
Confidence 35789999999999998 67899999999986542 1234679999999999999999999999999999999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC---CCeEEeeccCccc
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN---MEPCISEYGLIVT 497 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl~~~ 497 (626)
|||.||+|.+.+-. ...+....-..++.|++.|+.||| ++||+||||||+|||+..+ ..+||+|||+|+.
T Consensus 256 E~v~GGeLfd~vv~---nk~l~ed~~K~~f~Qll~avkYLH----~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 256 EYVEGGELFDKVVA---NKYLREDLGKLLFKQLLTAVKYLH----SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred EEecCccHHHHHHh---ccccccchhHHHHHHHHHHHHHHH----HcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 99999999999964 345777777889999999999999 7899999999999999876 7789999999987
Q ss_pred cCC--CccccccccccchhhccccCC---CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 498 ENH--DQSFLAQTSSLKINDISNQMC---STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 498 ~~~--~~~~~~~~~~~~~pe~~~~~~---~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
... .....+||+.|.|||+..... +..|+|+||+||+||-+++|.+||.+........+.+....+...
T Consensus 329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~------ 402 (475)
T KOG0615|consen 329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFG------ 402 (475)
T ss_pred cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccccc------
Confidence 643 234578999999999875443 345889999999999999999999865444444445554443322
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+....+..++.++++.++|..||++|||+.|+++
T Consensus 403 --p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 403 --PLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred --ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 1123344556889999999999999999999976
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=334.84 Aligned_cols=249 Identities=20% Similarity=0.314 Sum_probs=204.8
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccce-EEEeCCe-EEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLA-YYCSKQE-KLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g-~~~~~~~-~~lv~Ey~~ 424 (626)
.+.||+|.||+|||+. +.+|..||.|.++-...+ .++...|+.+|++++|||||++++ -+..+++ .+||||||.
T Consensus 24 l~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~ 103 (375)
T KOG0591|consen 24 LKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCD 103 (375)
T ss_pred HHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhc
Confidence 3789999999999998 789999999999844333 357889999999999999999998 3444555 899999999
Q ss_pred CCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc
Q 006903 425 NGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS 503 (626)
Q Consensus 425 ~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~ 503 (626)
.|+|.+.++.. +.++.+++..++++..|+++||..+|......-|+||||||.||+|+.+|.+|++|||+++......+
T Consensus 104 ~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~t 183 (375)
T KOG0591|consen 104 AGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTT 183 (375)
T ss_pred ccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhH
Confidence 99999999653 34567999999999999999999999643223399999999999999999999999999988766554
Q ss_pred c---cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 504 F---LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 504 ~---~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
+ ..||++||.||.+....|+.||||||+||++|||+.-+.||.+. ++.+.-+.+...+... ...+.
T Consensus 184 fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~----------~p~~~ 252 (375)
T KOG0591|consen 184 FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPP----------LPDEH 252 (375)
T ss_pred HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCC----------CcHHH
Confidence 3 57899999999999999999999999999999999999999854 6666655555554321 01134
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
....+.+|+..|+..||+.||+...++..+
T Consensus 253 YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 253 YSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred hhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 556788999999999999999854444443
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=330.56 Aligned_cols=249 Identities=17% Similarity=0.231 Sum_probs=195.9
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
..+|+|+||.|||++. ++|+.||||++.....+ .+-..+||++|++++|||+|.++++|......+||+|||+. +
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh-T 86 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH-T 86 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch-H
Confidence 5799999999999994 56999999999765543 24578999999999999999999999999999999999987 4
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~ 504 (626)
+.+-|.. ....++.....+++.|+++|+.|+| +++||||||||+|||++.++.+|+||||+|+..... .+.
T Consensus 87 vL~eLe~--~p~G~~~~~vk~~l~Q~l~ai~~cH----k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTD 160 (396)
T KOG0593|consen 87 VLHELER--YPNGVPSELVKKYLYQLLKAIHFCH----KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTD 160 (396)
T ss_pred HHHHHHh--ccCCCCHHHHHHHHHHHHHHhhhhh----hcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhh
Confidence 4444432 3356888999999999999999999 789999999999999999999999999999875532 234
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc--------------cccc----
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE--------------EWTV---- 565 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~--------------~~~~---- 565 (626)
+..|.+|.+||...+ ..|+..+||||.||++.||+||.+.|.+..++.+.......- ....
T Consensus 161 YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~l 240 (396)
T KOG0593|consen 161 YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRL 240 (396)
T ss_pred hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeec
Confidence 567899999998765 789999999999999999999999988766655543321110 0000
Q ss_pred -ccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 566 -EVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 566 -~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.-++.... ...+....-+++++..|++.||++|++.+|++.
T Consensus 241 P~~~~~epLe-~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 241 PEPEHPEPLE-RKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CCCCCccchh-hhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 000000000 011122335889999999999999999999865
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-42 Score=339.65 Aligned_cols=240 Identities=20% Similarity=0.311 Sum_probs=200.8
Q ss_pred cchhhhhcccccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCe
Q 006903 341 LKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE 415 (626)
Q Consensus 341 ~~~~~l~~~~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~ 415 (626)
...+|+. .-++||+|+||+||.++ .++++.+|+|.+++... ..+....|..+|.+++||+||++.-.|++...
T Consensus 22 ~~~~dF~--~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~k 99 (357)
T KOG0598|consen 22 VGPDDFE--ILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEK 99 (357)
T ss_pred CChhhee--eeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCe
Confidence 3444442 34899999999999998 55699999999987652 23568899999999999999999999999999
Q ss_pred EEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 416 KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
+|+|+||+.||+|+.+|. +...+++.....++.+|+.||.||| +.|||||||||+|||||.+|+++++|||++
T Consensus 100 LylVld~~~GGeLf~hL~---~eg~F~E~~arfYlaEi~lAL~~LH----~~gIiyRDlKPENILLd~~GHi~LtDFgL~ 172 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFYHLQ---REGRFSEDRARFYLAEIVLALGYLH----SKGIIYRDLKPENILLDEQGHIKLTDFGLC 172 (357)
T ss_pred EEEEEeccCCccHHHHHH---hcCCcchhHHHHHHHHHHHHHHHHH----hCCeeeccCCHHHeeecCCCcEEEeccccc
Confidence 999999999999999995 3457899999999999999999999 789999999999999999999999999999
Q ss_pred cccC---CCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 496 VTEN---HDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 496 ~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
+..- ......+||+.|||||+.....|+..+|+||+||++|||++|.+||.. .+...+...+.......
T Consensus 173 k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~-~~~~~~~~~I~~~k~~~------- 244 (357)
T KOG0598|consen 173 KEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA-EDVKKMYDKILKGKLPL------- 244 (357)
T ss_pred hhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC-ccHHHHHHHHhcCcCCC-------
Confidence 7532 233456899999999999999999999999999999999999999974 45566666666554110
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCC
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERP 601 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 601 (626)
.+.-......+++.+.+..||++|-
T Consensus 245 ----~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 245 ----PPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ----CCccCCHHHHHHHHHHhccCHHHhc
Confidence 0111223467888899999999995
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=342.71 Aligned_cols=259 Identities=17% Similarity=0.253 Sum_probs=209.0
Q ss_pred ccccchhhhhcccccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCH----HHHHHHHHHhccCCCCCccccceEEEe-
Q 006903 338 VNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS----EDFKNRMQKIDHVKHPNVLPPLAYYCS- 412 (626)
Q Consensus 338 ~~~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~----~~~~~ei~~l~~l~H~nIv~l~g~~~~- 412 (626)
+..++.+|+.......||+|++|.||+|.+ +|+.||||.++...... +.+.+|++++++++|||||+++|++.+
T Consensus 12 ~~~i~~~~i~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~ 90 (283)
T PHA02988 12 IKCIESDDIDKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI 90 (283)
T ss_pred ceecCHHHcCCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec
Confidence 455677777666667899999999999998 68899999998654332 567899999999999999999999876
Q ss_pred ---CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEE
Q 006903 413 ---KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCI 489 (626)
Q Consensus 413 ---~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl 489 (626)
....++||||+++|+|.++++. ...++|...++++.+++.||.|||+ ..+++||||||+|||+++++.+||
T Consensus 91 ~~~~~~~~lv~Ey~~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~Hrdlkp~nill~~~~~~kl 164 (283)
T PHA02988 91 VDDLPRLSLILEYCTRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYK---YTNKPYKNLTSVSFLVTENYKLKI 164 (283)
T ss_pred ccCCCceEEEEEeCCCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHh---cCCCCCCcCChhhEEECCCCcEEE
Confidence 3467899999999999999964 3468999999999999999999994 247889999999999999999999
Q ss_pred eeccCccccCCCccccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccc
Q 006903 490 SEYGLIVTENHDQSFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEV 567 (626)
Q Consensus 490 ~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 567 (626)
+|||+++..........++..|++||.... ..++.++|||||||++|||+||+.||... +..+....+........
T Consensus 165 ~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~-~~~~~~~~i~~~~~~~~- 242 (283)
T PHA02988 165 ICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL-TTKEIYDLIINKNNSLK- 242 (283)
T ss_pred cccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhcCCCCC-
Confidence 999998754433333456778999998765 56789999999999999999999999743 33343333332221111
Q ss_pred ccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 568 FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 568 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
.+......+.+++.+||+.||++|||++|+++.|+.++
T Consensus 243 ---------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 243 ---------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ---------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 11123445889999999999999999999999999875
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-42 Score=346.05 Aligned_cols=251 Identities=19% Similarity=0.283 Sum_probs=203.7
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHH--HHHHHHhccCC-CCCccccceEEEeCC-eEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDF--KNRMQKIDHVK-HPNVLPPLAYYCSKQ-EKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~--~~ei~~l~~l~-H~nIv~l~g~~~~~~-~~~lv~Ey~~~ 425 (626)
.+.||.|.||.||+|+ ..+|..||||++++.....++. .||++.|++++ |||||++.+++.+.+ .+++|||||+.
T Consensus 15 i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~ 94 (538)
T KOG0661|consen 15 IRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC 94 (538)
T ss_pred HHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh
Confidence 4789999999999998 6779999999999877666654 58999999999 999999999999887 89999999975
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--c
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--S 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~ 503 (626)
+|+++++++ ...|+...+..|+.||.+||+|+| .+|+.|||+||+|||+..+..+||+|||+|+...... +
T Consensus 95 -NLYqLmK~R--~r~fse~~irnim~QilqGL~hiH----k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYT 167 (538)
T KOG0661|consen 95 -NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIH----KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYT 167 (538)
T ss_pred -hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHH----hcCcccccCChhheEecccceeEecccccccccccCCCcc
Confidence 999999864 578999999999999999999999 6899999999999999998999999999998765433 4
Q ss_pred ccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHH--HhhcccccccccH--HH------
Q 006903 504 FLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHS--VVREEWTVEVFDE--VL------ 572 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~--~~~~~~~~~~~d~--~~------ 572 (626)
.+..|.+|+|||++. ...|+.+.|+||+|||++|+.+-++.|.+..++.+..+. ++..... +.... .+
T Consensus 168 eYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~-~~~~eg~~La~~mnf 246 (538)
T KOG0661|consen 168 EYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDK-DSWPEGYNLASAMNF 246 (538)
T ss_pred hhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCcc-ccchhHHHHHHHhcc
Confidence 567899999999865 457899999999999999999999988866555554332 2211100 00000 00
Q ss_pred -----Hh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 573 -----IA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 573 -----~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.. ....+.+..+..+++.+|+++||.+|||+.|++++
T Consensus 247 ~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 247 RFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 00 01112355678899999999999999999999774
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-42 Score=351.22 Aligned_cols=251 Identities=22% Similarity=0.348 Sum_probs=206.4
Q ss_pred cccccchhhhhcccccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeE
Q 006903 337 KVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEK 416 (626)
Q Consensus 337 ~~~~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~ 416 (626)
..+.++|+++.. -+.||.|+.|.||.|++. ++.||||+++.. -..+|+-|++|+||||+.+.|+|.....+
T Consensus 117 e~WeiPFe~IsE--LeWlGSGaQGAVF~Grl~-netVAVKKV~el------kETdIKHLRkLkH~NII~FkGVCtqsPcy 187 (904)
T KOG4721|consen 117 ELWEIPFEEISE--LEWLGSGAQGAVFLGRLH-NETVAVKKVREL------KETDIKHLRKLKHPNIITFKGVCTQSPCY 187 (904)
T ss_pred hhccCCHHHhhh--hhhhccCcccceeeeecc-CceehhHHHhhh------hhhhHHHHHhccCcceeeEeeeecCCcee
Confidence 457788888855 388999999999999986 678999998652 23578899999999999999999999999
Q ss_pred EEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 417 LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 417 ~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
+||||||+.|-|...|+ .+..+.......+..+||.|+.||| .+.|||||||.-||||..+..+||+|||.++
T Consensus 188 CIiMEfCa~GqL~~VLk---a~~~itp~llv~Wsk~IA~GM~YLH----~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~ 260 (904)
T KOG4721|consen 188 CIIMEFCAQGQLYEVLK---AGRPITPSLLVDWSKGIAGGMNYLH----LHKIIHRDLKSPNILISYDDVVKISDFGTSK 260 (904)
T ss_pred EEeeeccccccHHHHHh---ccCccCHHHHHHHHHHhhhhhHHHH----HhhHhhhccCCCceEeeccceEEeccccchH
Confidence 99999999999999996 4567788888999999999999999 5689999999999999999999999999987
Q ss_pred ccCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 497 TENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 497 ~~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
..... ...++||..|||||++...+.++|+||||||||||||+||..|+.+-...+ .+..+- .. ...
T Consensus 261 e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA-IIwGVG---------sN-sL~ 329 (904)
T KOG4721|consen 261 ELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA-IIWGVG---------SN-SLH 329 (904)
T ss_pred hhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe-eEEecc---------CC-ccc
Confidence 64432 234678999999999999999999999999999999999999987432211 000000 00 011
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
-..+..++..+.-|+++||+..|..||++++++..|+-..
T Consensus 330 LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 330 LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 1234556667888899999999999999999999997544
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=339.72 Aligned_cols=247 Identities=22% Similarity=0.328 Sum_probs=195.3
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~Ey~~~ 425 (626)
+.||+|.||.||||+ ..+|+.||+|+++.... ...-..+||.+|++|+||||++|.+...+. ...|||+|||++
T Consensus 123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh 202 (560)
T KOG0600|consen 123 EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH 202 (560)
T ss_pred HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc
Confidence 789999999999998 77899999999986542 334567999999999999999999988776 689999999987
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
||.-++. ..+..|+..++..++.|++.||.|+| .+||+|||||.+|||||.+|.+||+|||||+......
T Consensus 203 -DL~GLl~--~p~vkft~~qIKc~mkQLl~Gl~~cH----~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~ 275 (560)
T KOG0600|consen 203 -DLSGLLS--SPGVKFTEPQIKCYMKQLLEGLEYCH----SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAP 275 (560)
T ss_pred -hhhhhhc--CCCcccChHHHHHHHHHHHHHHHHHh----hcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcc
Confidence 8998886 34567999999999999999999999 7899999999999999999999999999998654433
Q ss_pred -cccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-------cccc------cc
Q 006903 503 -SFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-------EWTV------EV 567 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-------~~~~------~~ 567 (626)
+...-|.+|.+||++. ...|+.++|+||.||||.||++|++.+.+..++.+ ++.++.- .|.. ..
T Consensus 276 ~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQ-l~kIfklcGSP~e~~W~~~kLP~~~~ 354 (560)
T KOG0600|consen 276 YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQ-LHKIFKLCGSPTEDYWPVSKLPHATI 354 (560)
T ss_pred cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHH-HHHHHHHhCCCChhccccccCCcccc
Confidence 2234578999999764 56789999999999999999999988875544433 3333221 1110 00
Q ss_pred cc------HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 568 FD------EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 568 ~d------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+. ..+. +. ........++|+..+|..||.+|.|+.++++
T Consensus 355 ~kp~~~y~r~l~-E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 355 FKPQQPYKRRLR-ET-FKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCCCCcccchHH-HH-hccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 00 0000 00 1112335788889999999999999999865
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-41 Score=347.01 Aligned_cols=260 Identities=22% Similarity=0.324 Sum_probs=206.4
Q ss_pred cccccchhhhhcccccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeC
Q 006903 337 KVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSK 413 (626)
Q Consensus 337 ~~~~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~ 413 (626)
....+.++++.. .+.||+|.||+||+|++. ..||||.++...... +.|++|+..+++-+|.||+-+.|||..+
T Consensus 385 ~~WeIp~~ev~l--~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLL--GERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhc--cceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 456777777754 489999999999999975 369999998776544 5799999999999999999999998776
Q ss_pred CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeecc
Q 006903 414 QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYG 493 (626)
Q Consensus 414 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 493 (626)
.. .||+.+|+|-+|+.+||..+ ..|+....+.||.|||+|+.||| .++|||||||..||++.+++++||+|||
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLH----AK~IIHrDLKSnNIFl~~~~kVkIgDFG 533 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLH----AKNIIHRDLKSNNIFLHEDLKVKIGDFG 533 (678)
T ss_pred ce-eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhh----hhhhhhhhccccceEEccCCcEEEeccc
Confidence 66 99999999999999998643 67899999999999999999999 7899999999999999999999999999
Q ss_pred CccccC-----CCccccccccccchhhcccc---CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc
Q 006903 494 LIVTEN-----HDQSFLAQTSSLKINDISNQ---MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV 565 (626)
Q Consensus 494 l~~~~~-----~~~~~~~~~~~~~~pe~~~~---~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 565 (626)
++.... .......+...|+|||++.. .+++..+||||||||+|||+||..|+. .....+.+..+-++....
T Consensus 534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGrG~l~p 612 (678)
T KOG0193|consen 534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLMP 612 (678)
T ss_pred ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecccccCc
Confidence 974321 11122345567999998753 467999999999999999999999997 222222222222221111
Q ss_pred ccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 566 EVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 566 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
+ ... ....+..++.+|+..||..++++||.+.+|+..|+++..
T Consensus 613 d---~s~----~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 613 D---LSK----IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred c---chh----hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 1 111 123455668888999999999999999999998888765
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=336.16 Aligned_cols=245 Identities=23% Similarity=0.364 Sum_probs=196.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCC--eEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ--EKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~--~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||++.. ++|...|||.+..... ..+.+.+|+++|.+++|||||+++|...... .+++.|||+++|
T Consensus 22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~G 101 (313)
T KOG0198|consen 22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGG 101 (313)
T ss_pred hccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCC
Confidence 57899999999999995 4599999999876532 2456899999999999999999999855554 689999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCccccCC-----
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTENH----- 500 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~~~----- 500 (626)
+|.+++.... ..++...+.++..||++||.||| ++|||||||||+|||++. ++.+||+|||+++....
T Consensus 102 sL~~~~~~~g--~~l~E~~v~~ytr~iL~GL~ylH----s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~ 175 (313)
T KOG0198|consen 102 SLSDLIKRYG--GKLPEPLVRRYTRQILEGLAYLH----SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKS 175 (313)
T ss_pred cHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHH----hCCEeccCcccceEEEeCCCCeEEeccCccccccccccccc
Confidence 9999997532 27999999999999999999999 789999999999999999 79999999999875442
Q ss_pred -CccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 501 -DQSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 501 -~~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
......+++.||+||..... ....++|||||||++.||+||+.||.+-....++...+........ .+
T Consensus 176 ~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~----------ip 245 (313)
T KOG0198|consen 176 DSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPE----------IP 245 (313)
T ss_pred cccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCC----------CC
Confidence 12346789999999998852 2335999999999999999999998753333344333333321111 12
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
........+++.+|++.||++|||++++++.--
T Consensus 246 ~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 246 DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 223345778899999999999999999988654
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=344.00 Aligned_cols=239 Identities=20% Similarity=0.315 Sum_probs=204.1
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHH-HHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSE-DFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~-~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
..||+|+.|.||.|. ..+++.||||++....+..+ -+.+|+.+|+..+|+|||.+++.|...++.|+|||||++|+|.
T Consensus 279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLT 358 (550)
T KOG0578|consen 279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLT 358 (550)
T ss_pred hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchh
Confidence 679999999999998 67799999999987776554 4679999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~~~ 506 (626)
+.+.. ..+++.++-.|+.++++||+||| .+||+|||||.+|||++.++.+||+|||++..... ......
T Consensus 359 DvVt~----~~~~E~qIA~Icre~l~aL~fLH----~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmV 430 (550)
T KOG0578|consen 359 DVVTK----TRMTEGQIAAICREILQGLKFLH----ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMV 430 (550)
T ss_pred hhhhc----ccccHHHHHHHHHHHHHHHHHHH----hcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcccccc
Confidence 99853 35899999999999999999999 78999999999999999999999999999865433 345678
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
||++|||||+.....|++|+||||||++++||+-|++||.++..+.......... ..++- ..+.....+.
T Consensus 431 GTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng--~P~lk--------~~~klS~~~k 500 (550)
T KOG0578|consen 431 GTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG--TPKLK--------NPEKLSPELK 500 (550)
T ss_pred CCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcC--CCCcC--------CccccCHHHH
Confidence 9999999999999999999999999999999999999998776665543322222 12211 1223344588
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 006903 587 QVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+++.+||+.|+++||++.|+++
T Consensus 501 dFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 501 DFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHHHHHhhcchhcCCCHHHHhc
Confidence 8999999999999999999986
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=344.89 Aligned_cols=250 Identities=19% Similarity=0.309 Sum_probs=195.0
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCC-eEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQ-EKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~-~~~lv~ 420 (626)
.+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++.++ +||||+++++++...+ ..++||
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIV 91 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEE
Confidence 47899999999999973 2357899999975432 235688999999999 8999999999887644 578999
Q ss_pred eecCCCChhHhhcCCCC-----------------------------------------------------------CCCC
Q 006903 421 EYQPNGSLFNLLHGSEN-----------------------------------------------------------GQSF 441 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~-----------------------------------------------------------~~~l 441 (626)
||+++|+|.+++..... ...+
T Consensus 92 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (338)
T cd05102 92 EFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPL 171 (338)
T ss_pred ecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCC
Confidence 99999999999864211 1347
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc-----ccccccccchhhc
Q 006903 442 DWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS-----FLAQTSSLKINDI 516 (626)
Q Consensus 442 ~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~-----~~~~~~~~~~pe~ 516 (626)
++...+.++.|++.||+||| +++|+||||||+|||+++++.+||+|||+++....... ...++..|++||.
T Consensus 172 ~~~~~~~~~~qi~~aL~~LH----~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 247 (338)
T cd05102 172 TMEDLICYSFQVARGMEFLA----SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPES 247 (338)
T ss_pred CHHHHHHHHHHHHHHHHHHH----HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHH
Confidence 88899999999999999999 67999999999999999999999999999875322211 1223467999999
Q ss_pred cccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCC
Q 006903 517 SNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQ 595 (626)
Q Consensus 517 ~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~ 595 (626)
.....++.++|||||||++|||++ |+.||................. ... .+......+.+++.+||+.
T Consensus 248 ~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-~~~----------~~~~~~~~l~~li~~cl~~ 316 (338)
T cd05102 248 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT-RMR----------APENATPEIYRIMLACWQG 316 (338)
T ss_pred hhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC-CCC----------CCCCCCHHHHHHHHHHccC
Confidence 888888999999999999999997 9999864332222222221111 110 0112234588999999999
Q ss_pred CCCCCCCHHHHHHHHHhhhh
Q 006903 596 SPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 596 dP~~RPs~~ev~~~L~~i~~ 615 (626)
||++|||+.|+++.|+++..
T Consensus 317 dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 317 DPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred ChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=338.90 Aligned_cols=239 Identities=21% Similarity=0.308 Sum_probs=198.9
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC----HHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS----SEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
+++||+|+|++||+|+ ..+++.+|||++.+.... .+.+.+|-..|.+| .||.|++|+-.|.++..+|+|+||++
T Consensus 78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~ 157 (604)
T KOG0592|consen 78 GKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAP 157 (604)
T ss_pred hheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecC
Confidence 5789999999999998 667999999999776532 23567888889999 89999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
+|+|.++++. .+.|+......++.+|..||+||| ++|||||||||+|||||+||++||+|||.|+.....
T Consensus 158 nGdll~~i~K---~Gsfde~caR~YAAeIldAleylH----~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 158 NGDLLDLIKK---YGSFDETCARFYAAEILDALEYLH----SNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred CCcHHHHHHH---hCcchHHHHHHHHHHHHHHHHHHH----hcCceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence 9999999963 467999999999999999999999 789999999999999999999999999997642210
Q ss_pred -------------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 502 -------------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 502 -------------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
.....||..|.+||++.....++.+|+|+|||+||+|+.|++||..+.+... +++++.-++.
T Consensus 231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli-FqkI~~l~y~---- 305 (604)
T KOG0592|consen 231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI-FQKIQALDYE---- 305 (604)
T ss_pred ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH-HHHHHHhccc----
Confidence 1235688899999999999999999999999999999999999986655433 3333332211
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.++...+.+.+|+.+.|..||.+|+|.+||.+.
T Consensus 306 --------fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 306 --------FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred --------CCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 111222357788999999999999999888663
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=370.35 Aligned_cols=250 Identities=23% Similarity=0.346 Sum_probs=206.8
Q ss_pred ccccccCCCcceEEEEeCC--C----cEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLDD--G----LMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~--g----~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
...||+|+||.||+|.+.+ | ..||||.+++.. ....+|.+|..+|++++|||||+++|+|.+....+|++||
T Consensus 697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~ley 776 (1025)
T KOG1095|consen 697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEY 776 (1025)
T ss_pred eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehh
Confidence 4789999999999998643 3 359999998764 3446899999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 423 QPNGSLFNLLHGSEN----GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
|++|||..+|+..+. ...++....+.++.|||+|+.||+ ++++|||||.++||||+....+||+|||+|+..
T Consensus 777 M~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe----~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 777 MEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE----SKHFVHRDLAARNCLLDERRVVKIADFGLARDI 852 (1025)
T ss_pred cccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH----hCCCcCcchhhhheeecccCcEEEcccchhHhh
Confidence 999999999986432 346888999999999999999999 689999999999999999999999999999853
Q ss_pred CCCcccc-----ccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 499 NHDQSFL-----AQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 499 ~~~~~~~-----~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
.....+. .-+..|||||.+....++.|+|||||||++||++| |..|+. +.+..+.+..+..+...
T Consensus 853 y~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~-~~~n~~v~~~~~~ggRL-------- 923 (1025)
T KOG1095|consen 853 YDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYP-SRSNFEVLLDVLEGGRL-------- 923 (1025)
T ss_pred hhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCC-CcchHHHHHHHHhCCcc--------
Confidence 3322221 12356899999998999999999999999999999 555665 44444544444444411
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
..+..|+..++++|..||+.+|++||++..+++.+..+...
T Consensus 924 ---~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 924 ---DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred ---CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 13455677899999999999999999999999999887654
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-40 Score=310.29 Aligned_cols=252 Identities=19% Similarity=0.272 Sum_probs=199.8
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.+|+|.||.||+|+ ..+|+.||||+++..... .....+||+.|+.++|+||+.+++.|.+.+..-||+|||+.
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t- 85 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT- 85 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-
Confidence 3789999999999998 678999999999866432 35688999999999999999999999999999999999986
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---S 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~ 503 (626)
+|...++. ....++..++..++.++.+|++||| .+.|+||||||.|+|++.+|.+||+|||+++...... .
T Consensus 86 dLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H----~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 86 DLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCH----SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred cHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHH----hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 99999974 3467999999999999999999999 6789999999999999999999999999998754322 2
Q ss_pred ccccccccchhhcc-ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHH--hh----ccccc--ccccHHHH-
Q 006903 504 FLAQTSSLKINDIS-NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV--VR----EEWTV--EVFDEVLI- 573 (626)
Q Consensus 504 ~~~~~~~~~~pe~~-~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~--~~----~~~~~--~~~d~~~~- 573 (626)
....|.+|.|||.. +...|+..+|+||.|||+.||+-|.+-|.+..++.+..... .. +.|.. ...|..-.
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence 23568899999975 45678999999999999999999987776655554432221 11 11110 11111100
Q ss_pred ------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 574 ------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 574 ------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
....-..+....++++..++..||.+|+++.|++++
T Consensus 240 ~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 240 QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 010112234457999999999999999999999764
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=347.67 Aligned_cols=250 Identities=22% Similarity=0.353 Sum_probs=203.0
Q ss_pred cccccCCCcceEEEEeCC--C--cE-EEEEEcCCCC-C---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLDD--G--LM-LAVKRLRDWS-I---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~--g--~~-vAvK~l~~~~-~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
+.||+|+||.||+|++.. + .. ||||..+... . ...+|.+|.++|+.++|||||+++|++..+...++|||+
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl 242 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMEL 242 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEe
Confidence 899999999999998543 2 23 8999988533 2 336799999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
|+||+|.++|+. ....++..++++++.++|.||+||| ++++|||||.++|||++.++.+||+|||+++......
T Consensus 243 ~~gGsL~~~L~k--~~~~v~~~ek~~~~~~AA~Gl~YLh----~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~ 316 (474)
T KOG0194|consen 243 CNGGSLDDYLKK--NKKSLPTLEKLRFCYDAARGLEYLH----SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYV 316 (474)
T ss_pred cCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHhHHHHHH----HCCCcchhHhHHHheecCCCeEEeCccccccCCccee
Confidence 999999999974 3347999999999999999999999 7899999999999999999999999999987653111
Q ss_pred ---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 ---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....-+..|.|||+.....+++++|||||||++||+++ |..|+.+ ....+....+....+.....+
T Consensus 317 ~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g-~~~~~v~~kI~~~~~r~~~~~--------- 386 (474)
T KOG0194|consen 317 MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPG-MKNYEVKAKIVKNGYRMPIPS--------- 386 (474)
T ss_pred eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCC-CCHHHHHHHHHhcCccCCCCC---------
Confidence 11224567899999998899999999999999999999 7777764 344444444434443332211
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
..+..+..++.+||..+|++||+|.++.+.|+.+.....
T Consensus 387 -~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 387 -KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred -CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 223456777789999999999999999999998876543
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=324.97 Aligned_cols=250 Identities=17% Similarity=0.290 Sum_probs=200.2
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.++||.|..++||+|+ .+.++.||||++.-... ..+.+.+|++.|+.++||||++++..|..+..+|+||.||.+|+
T Consensus 31 ~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS 110 (516)
T KOG0582|consen 31 QEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGS 110 (516)
T ss_pred EEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCc
Confidence 4789999999999998 67889999999975542 34688999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-----
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----- 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----- 502 (626)
+.++++..- ...+++..+..|.+++++||.||| .+|.||||||+.||||+++|.+||+|||.+.......
T Consensus 111 ~ldIik~~~-~~Gl~E~~Ia~iLre~LkaL~YLH----~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~ 185 (516)
T KOG0582|consen 111 LLDIIKTYY-PDGLEEASIATILREVLKALDYLH----QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVT 185 (516)
T ss_pred HHHHHHHHc-cccccHHHHHHHHHHHHHHHHHHH----hcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeE
Confidence 999997532 235889999999999999999999 6899999999999999999999999999853321111
Q ss_pred --cccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 --SFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....++++|++||+..+ ..|+.|+|||||||+..||++|..||..-..+...+..+.......+.. .......
T Consensus 186 rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~---~~~~d~~ 262 (516)
T KOG0582|consen 186 RFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTS---GLDKDED 262 (516)
T ss_pred eeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccc---cCChHHh
Confidence 34578999999998433 3679999999999999999999999986555544444444333221100 0000111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++..|+++||++|||++++++
T Consensus 263 k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 263 KKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred hhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 122336889999999999999999999876
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=351.42 Aligned_cols=248 Identities=19% Similarity=0.303 Sum_probs=209.5
Q ss_pred ccccccCCCcceEEEEeC----CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.++||.|.||.||+|+++ ....||||.++... ....+|+.|..+|.++.||||++|-|+.......+||.|||+
T Consensus 634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyME 713 (996)
T KOG0196|consen 634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYME 713 (996)
T ss_pred EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhh
Confidence 579999999999999964 24689999999765 344689999999999999999999999998899999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccc
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF 504 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~ 504 (626)
||+|+.+|+... ..|.+.+..-+.++||.|+.||- +.+.|||||.++|||++.+...||+|||+++....+...
T Consensus 714 NGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLs----dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~ 787 (996)
T KOG0196|consen 714 NGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLS----DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 787 (996)
T ss_pred CCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHh----hcCchhhhhhhhheeeccceEEEeccccceeecccCCCc
Confidence 999999998543 45999999999999999999998 789999999999999999999999999999875444322
Q ss_pred cc------cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 505 LA------QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 505 ~~------~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
.. -+..|.|||.+.....|.++||||||||+||.++ |..|+.+. +..+.++.+..+... ..
T Consensus 788 ~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm-SNQdVIkaIe~gyRL-----------Pp 855 (996)
T KOG0196|consen 788 AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-SNQDVIKAIEQGYRL-----------PP 855 (996)
T ss_pred cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc-chHHHHHHHHhccCC-----------CC
Confidence 11 1346889999999999999999999999999887 88998643 444555544433222 23
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+.+++..|.+||+.||++|-.+||.+.||+..|.++...
T Consensus 856 PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 856 PMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 456778899999999999999999999999999987543
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=333.15 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=200.4
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.++.||+|.||.|..+....+..||||.++.... ..++|.+|+++|.+++|||||.++|+|..++.+++|+|||++|+
T Consensus 542 ~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGD 621 (807)
T KOG1094|consen 542 FKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGD 621 (807)
T ss_pred hhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCc
Confidence 3688999999999999998889999999997652 34789999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccccc-
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLA- 506 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~- 506 (626)
|.+++...... .+.-...++|+.|||.|++||. +.++|||||.++|||+|.++++||+|||+++......++..
T Consensus 622 LnqFl~aheap-t~~t~~~vsi~tqiasgmaYLe----s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vq 696 (807)
T KOG1094|consen 622 LNQFLSAHELP-TAETAPGVSICTQIASGMAYLE----SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQ 696 (807)
T ss_pred HHHHHHhccCc-ccccchhHHHHHHHHHHHHHHH----hhchhhccccccceeecCcccEEecCcccccccccCCceeee
Confidence 99999754321 2344566789999999999999 67899999999999999999999999999986544333322
Q ss_pred ----cccccchhhccccCCCCCcchhHHHHHHHHHHHc--CCCCCCCCcc--hhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 507 ----QTSSLKINDISNQMCSTIKADVYGFGVILLELLT--GKLVQNNGFN--LATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 507 ----~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt--g~~p~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
-+..||++|.+.-...++++|||+||+++||+++ ...|+....+ ..+-.....++...... ...+
T Consensus 697 gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~-------l~~P 769 (807)
T KOG1094|consen 697 GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV-------LSRP 769 (807)
T ss_pred cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee-------ccCC
Confidence 2456899998888888999999999999999966 6677753211 11111112222111111 1123
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.-++..+++++.+||..|-++||+++++...|.+.
T Consensus 770 ~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 770 PACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 44566799999999999999999999999988764
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=336.60 Aligned_cols=238 Identities=21% Similarity=0.314 Sum_probs=198.7
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC------CCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS------ISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~------~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
++.||+|+||+||.|. ..++..||+|.+.... ...+.+.+|+.++++++ ||||++++.++.+....++||||
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy 101 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEY 101 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEe
Confidence 5789999999999997 5678999999776531 12456778999999999 99999999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC-CCeEEeeccCcccc---
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN-MEPCISEYGLIVTE--- 498 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGl~~~~--- 498 (626)
+.+|+|.+++.. ...+.+....+++.|++.|++|+| ++||+||||||+|||+|.+ +++||+|||++...
T Consensus 102 ~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H----~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~ 174 (370)
T KOG0583|consen 102 CSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCH----SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGE 174 (370)
T ss_pred cCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHH----hCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCC
Confidence 999999999964 457888999999999999999999 7899999999999999999 99999999998765
Q ss_pred CCCccccccccccchhhccccCC-C-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 499 NHDQSFLAQTSSLKINDISNQMC-S-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 499 ~~~~~~~~~~~~~~~pe~~~~~~-~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
.......+|++.|+|||++.... | +.++||||+||+||.|++|+.||++ .+.......+........
T Consensus 175 ~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d-~~~~~l~~ki~~~~~~~p---------- 243 (370)
T KOG0583|consen 175 DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD-SNVPNLYRKIRKGEFKIP---------- 243 (370)
T ss_pred CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-ccHHHHHHHHhcCCccCC----------
Confidence 23345678999999999988765 5 5899999999999999999999986 344444444433332211
Q ss_pred ccHHH-HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 577 ASEER-MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 577 ~~~~~-~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
... ...+..++.+|+..||.+|+|+.+|+.
T Consensus 244 --~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 244 --SYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred --CCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 111 345788999999999999999999983
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=332.90 Aligned_cols=236 Identities=18% Similarity=0.297 Sum_probs=202.8
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
+.||+|.||.||||+ ..+.+.||+|.+.+..... +.+.+|++++++++|||||.++++|++..+.|+|.||+.+ +
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~ 86 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-D 86 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-h
Confidence 679999999999998 5578999999998766544 4578999999999999999999999999999999999987 9
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---SF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~~ 504 (626)
|+.+|.. ...+++..+..++.++..||.||| +++|+|||+||.|||++..+.+|++|||+|+...... +.
T Consensus 87 L~~il~~---d~~lpEe~v~~~a~~LVsaL~yLh----s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlts 159 (808)
T KOG0597|consen 87 LFTILEQ---DGKLPEEQVRAIAYDLVSALYYLH----SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTS 159 (808)
T ss_pred HHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHH----hcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeee
Confidence 9999964 357999999999999999999999 7899999999999999999999999999998765443 45
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
+.|++.||+||...+..|+..+|.||+||++||+++|++||.. .++.+.++.+..+.... +......
T Consensus 160 ikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-~si~~Lv~~I~~d~v~~------------p~~~S~~ 226 (808)
T KOG0597|consen 160 IKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-RSITQLVKSILKDPVKP------------PSTASSS 226 (808)
T ss_pred ccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-HHHHHHHHHHhcCCCCC------------cccccHH
Confidence 6799999999999999999999999999999999999999973 35556666665543221 1133345
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+..++...+.+||.+|.+-.+++.
T Consensus 227 f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 227 FVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHHHHHHhhcChhhcccHHHHhc
Confidence 778888999999999999888764
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=307.85 Aligned_cols=238 Identities=20% Similarity=0.255 Sum_probs=199.9
Q ss_pred cchhhhhcccccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCe
Q 006903 341 LKFEDLLRAPAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE 415 (626)
Q Consensus 341 ~~~~~l~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~ 415 (626)
..++|+.. ...||.|+||.|..++. .+|..+|+|.+.+... ..+...+|..+|+.+.||+++++.+.+.+.+.
T Consensus 41 ~~l~dfe~--~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ 118 (355)
T KOG0616|consen 41 YSLQDFER--LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSN 118 (355)
T ss_pred cchhhhhh--eeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCe
Confidence 44455533 37899999999999984 5689999999987652 22457789999999999999999999999999
Q ss_pred EEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 416 KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
.++||||++||.|+.+|+. .+.++......+|.+|+.||+||| +.+|++|||||+|||||.+|.+||+|||+|
T Consensus 119 lymvmeyv~GGElFS~Lrk---~~rF~e~~arFYAAeivlAleylH----~~~iiYRDLKPENiLlD~~G~iKitDFGFA 191 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRK---SGRFSEPHARFYAAEIVLALEYLH----SLDIIYRDLKPENLLLDQNGHIKITDFGFA 191 (355)
T ss_pred EEEEEeccCCccHHHHHHh---cCCCCchhHHHHHHHHHHHHHHHH----hcCeeeccCChHHeeeccCCcEEEEeccce
Confidence 9999999999999999963 457999999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 496 VTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
+.........+||+.|.|||++....++..+|.|||||++|||+.|.+||..... .+..+.+.......
T Consensus 192 K~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-~~iY~KI~~~~v~f---------- 260 (355)
T KOG0616|consen 192 KRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-IQIYEKILEGKVKF---------- 260 (355)
T ss_pred EEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-HHHHHHHHhCcccC----------
Confidence 9887777788999999999999999999999999999999999999999986554 34444444433211
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCC
Q 006903 576 AASEERMLKLLQVALRCINQSPNER 600 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~R 600 (626)
+......+.+|+.+.++.|-.+|
T Consensus 261 --P~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 261 --PSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred --CcccCHHHHHHHHHHHhhhhHhh
Confidence 11112236667777888888877
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=316.69 Aligned_cols=242 Identities=20% Similarity=0.299 Sum_probs=197.7
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||++...++..+|+|.+.......+++.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~ 88 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLN 88 (256)
T ss_pred eeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHH
Confidence 36799999999999998888899999988666667889999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
+++.. ...++|..+..++.+++.||.||| +++|+||||||+||++++++.+|++|||+++...... ....
T Consensus 89 ~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~ 162 (256)
T cd05114 89 YLRQR--QGKLSKDMLLSMCQDVCEGMEYLE----RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAK 162 (256)
T ss_pred HHHhC--ccCCCHHHHHHHHHHHHHHHHHHH----HCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCC
Confidence 99642 235899999999999999999999 6799999999999999999999999999886532211 1122
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++|||++ |+.||.... ..+....+....... . +......+
T Consensus 163 ~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~-~~~~~~~i~~~~~~~---~--------~~~~~~~~ 230 (256)
T cd05114 163 FPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS-NYEVVEMISRGFRLY---R--------PKLASMTV 230 (256)
T ss_pred CchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHCCCCCC---C--------CCCCCHHH
Confidence 3456899999887788899999999999999999 888886432 233333333222110 0 01122357
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
.+++.+||+.+|++||++.++++.|
T Consensus 231 ~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 231 YEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHHHHHccCCcccCcCHHHHHHhh
Confidence 8999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-39 Score=335.95 Aligned_cols=240 Identities=22% Similarity=0.314 Sum_probs=206.3
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
++-||.|+-|.|-.|+ ..+|+.+|||++.++. .....+.+||-+|+-+.|||++++++++.+..++|+|.||+++
T Consensus 17 gkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~g 96 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPG 96 (786)
T ss_pred cccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCC
Confidence 5779999999999998 5789999999998763 2235689999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~ 503 (626)
|.|++++.. .++++..+..+++.||..|+.|+| ..+|+||||||+|+|||...++||+|||+|.....+ -.
T Consensus 97 GELFdylv~---kG~l~e~eaa~ff~QIi~gv~yCH----~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLe 169 (786)
T KOG0588|consen 97 GELFDYLVR---KGPLPEREAAHFFRQILDGVSYCH----AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLE 169 (786)
T ss_pred chhHHHHHh---hCCCCCHHHHHHHHHHHHHHHHHh----hhcceeccCCchhhhhhcccCEeeeccceeecccCCcccc
Confidence 999999963 457899999999999999999999 568999999999999999999999999998764333 24
Q ss_pred ccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
..+|.+.|++||+..+..| +.++||||.|||||.|+||+.||+ +.++...+..+.++.+.. +....
T Consensus 170 TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd-DdNir~LLlKV~~G~f~M------------Ps~Is 236 (786)
T KOG0588|consen 170 TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD-DDNIRVLLLKVQRGVFEM------------PSNIS 236 (786)
T ss_pred ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC-CccHHHHHHHHHcCcccC------------CCcCC
Confidence 5688999999999887766 789999999999999999999998 457777777776665322 12223
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
.++.+|+.+++..||++|.|++||.+.-
T Consensus 237 ~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 237 SEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HHHHHHHHHHhccCccccccHHHHhhCc
Confidence 3578899999999999999999998854
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=332.47 Aligned_cols=248 Identities=23% Similarity=0.358 Sum_probs=209.1
Q ss_pred ccccccCCCcceEEEEeCC-CcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLDD-GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
...||-|.||.||.|.|+. .-.||||.++......++|..|..+|+.++|||+|+|+|+|..+..+|||+|||.+|+|.
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLL 351 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLL 351 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHH
Confidence 4789999999999999764 678999999988888899999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc-cc-
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL-AQ- 507 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~-~~- 507 (626)
+||+... ...++--..+.+|.||+.|+.||. .+++|||||..+|||+.++-.+||+|||+++....+.... +|
T Consensus 352 dYLRecn-r~ev~avvLlyMAtQIsSaMeYLE----kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGA 426 (1157)
T KOG4278|consen 352 DYLRECN-RSEVPAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGA 426 (1157)
T ss_pred HHHHHhc-hhhcchhHHHHHHHHHHHHHHHHH----HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCc
Confidence 9998643 345666678899999999999999 6789999999999999999999999999998876654322 22
Q ss_pred --ccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 508 --TSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 508 --~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
+..|.+||.+.....+.|+|||+|||+|||+.| |..|+. |.++.+.+ .++..++..+ .++.|+++
T Consensus 427 KFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYP-GidlSqVY-~LLEkgyRM~----------~PeGCPpk 494 (1157)
T KOG4278|consen 427 KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVY-GLLEKGYRMD----------GPEGCPPK 494 (1157)
T ss_pred cCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCC-CccHHHHH-HHHhcccccc----------CCCCCCHH
Confidence 345788998888888999999999999999998 666664 55655443 3333333322 34456778
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 585 LLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
+++||+.||+++|.+||+++|+-+.++.+-.
T Consensus 495 VYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 495 VYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred HHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 9999999999999999999999999987653
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=298.08 Aligned_cols=251 Identities=20% Similarity=0.295 Sum_probs=209.3
Q ss_pred cccchhhhhcccccccccCCCcceEEEE-eCCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeC
Q 006903 339 NKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK 413 (626)
Q Consensus 339 ~~~~~~~l~~~~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~ 413 (626)
...+++|+. .+..||+|.||.||.|+ .+++-.||+|++.+.. ....++.+|+++-+.++||||+++++||.+.
T Consensus 17 ~~~~l~dfe--igr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~ 94 (281)
T KOG0580|consen 17 KTWTLDDFE--IGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS 94 (281)
T ss_pred cccchhhcc--ccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc
Confidence 345556653 35889999999999999 4568899999997654 2346899999999999999999999999999
Q ss_pred CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeecc
Q 006903 414 QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYG 493 (626)
Q Consensus 414 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 493 (626)
...||++||.+.|+++..|... ....++......+..|+|.||.|+| .++|+||||||+|+|++..+..|++|||
T Consensus 95 ~riyLilEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h----~k~VIhRdiKpenlLlg~~~~lkiAdfG 169 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCH----LKRVIHRDIKPENLLLGSAGELKIADFG 169 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhc----cCCcccCCCCHHHhccCCCCCeeccCCC
Confidence 9999999999999999999743 3456788888899999999999999 7899999999999999999999999999
Q ss_pred Ccccc-CCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 494 LIVTE-NHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 494 l~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
-+... .......++|..|.+||+.....++.++|+|++||+.||++.|.+||.... ..+..+++...+ ..++
T Consensus 170 wsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~----~~~p-- 242 (281)
T KOG0580|consen 170 WSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVD----LKFP-- 242 (281)
T ss_pred ceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHcc----ccCC--
Confidence 87654 444567889999999999999999999999999999999999999998654 334444443332 2222
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
......+.+++.+|+..+|.+|.+..|++..
T Consensus 243 ------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 243 ------STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ------cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1122347789999999999999999999874
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=318.74 Aligned_cols=245 Identities=19% Similarity=0.303 Sum_probs=195.6
Q ss_pred ccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|.+. .+..||+|.++.... ....+.+|++.+++++||||+++++++...+..++||||++
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 89 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMS 89 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCC
Confidence 478999999999999743 467899999986532 23578899999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-- 502 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-- 502 (626)
+|+|.+++... ...+++..++.++.|++.||+||| +.+++||||||+||+++.++.+|++|||.+.......
T Consensus 90 ~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH----~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~ 163 (266)
T cd05064 90 NGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLS----EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY 163 (266)
T ss_pred CCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH----HCCEeeccccHhhEEEcCCCcEEECCCcccccccccchh
Confidence 99999999642 346899999999999999999999 6799999999999999999999999999865432211
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
....++..|++||......++.++|||||||++||+++ |+.||... ...+....+... ... ..+.
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~-~~~~~~~~~~~~-~~~----------~~~~ 231 (266)
T cd05064 164 TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM-SGQDVIKAVEDG-FRL----------PAPR 231 (266)
T ss_pred cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC-CHHHHHHHHHCC-CCC----------CCCC
Confidence 11123457899998888888999999999999999875 99998643 222222222211 110 0112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
..+..+.+++.+||+.+|++||+++|+.+.|+++
T Consensus 232 ~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 232 NCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 2344688899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=336.68 Aligned_cols=248 Identities=20% Similarity=0.330 Sum_probs=194.7
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .++..||||+++.... ..+.+.+|++++..+ +||||++++++|...+..++|||
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E 119 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITE 119 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeeh
Confidence 58899999999999963 3467899999975432 335688999999999 89999999999999999999999
Q ss_pred ecCCCChhHhhcCCCC----------------------------------------------------------------
Q 006903 422 YQPNGSLFNLLHGSEN---------------------------------------------------------------- 437 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~---------------------------------------------------------------- 437 (626)
|+++|+|.++++....
T Consensus 120 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (375)
T cd05104 120 YCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDV 199 (375)
T ss_pred hccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceeccccc
Confidence 9999999999864211
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccc-----
Q 006903 438 --------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF----- 504 (626)
Q Consensus 438 --------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~----- 504 (626)
...++|..+++++.||++||+||| +++|+||||||+|||+++++.+||+|||+++........
T Consensus 200 ~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 275 (375)
T cd05104 200 TSEILEEDELALDTEDLLSFSYQVAKGMSFLA----SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGN 275 (375)
T ss_pred HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCC
Confidence 125789999999999999999999 679999999999999999999999999998654322211
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...+..|++||......++.++|||||||++|||+| |..||............ ......... +.....
T Consensus 276 ~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~~~----------~~~~~~ 344 (375)
T cd05104 276 ARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM-IKEGYRMLS----------PECAPS 344 (375)
T ss_pred CCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH-HHhCccCCC----------CCCCCH
Confidence 123446999999888888999999999999999998 78887643322222222 221111100 011123
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.+.+++.+||+.||++||++.||++.|++.
T Consensus 345 ~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 345 EMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 588999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-39 Score=322.57 Aligned_cols=243 Identities=27% Similarity=0.449 Sum_probs=189.6
Q ss_pred ccccccCCCcceEEEEeC-----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLD-----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||.|.||.||+|.+. .+..|+||.++.... ..+++.+|++.+++++||||++++|++...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 368999999999999965 367899999966433 2468999999999999999999999999888899999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.++|+.. ....+++..+..|+.||++||.||| +.+|+|+||+++||++++++.+||+|||++.......
T Consensus 84 ~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh----~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 84 PGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLH----SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHH----HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred cccccccccccc-ccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccc
Confidence 999999999753 2457899999999999999999999 5789999999999999999999999999987652211
Q ss_pred ----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 ----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 ----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
........|.+||......++.++||||||+++|||+| |+.|+.+. +..++......... .. .
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-~~~~~~~~~~~~~~-~~----------~ 226 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-DNEEIIEKLKQGQR-LP----------I 226 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-CHHHHHHHHHTTEE-TT----------S
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccc-ce----------e
Confidence 11234556889999877778999999999999999999 67777644 44444444432221 11 1
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
+..+...+.+++.+||+.+|++||||+++++.|
T Consensus 227 ~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 227 PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 112234588899999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=325.03 Aligned_cols=250 Identities=21% Similarity=0.299 Sum_probs=190.9
Q ss_pred ccccccCCCcceEEEEeCC-----------------CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEE
Q 006903 351 AELLGRGKHGSLYRVVLDD-----------------GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYC 411 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~-----------------g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~ 411 (626)
.+.||+|+||.||+|...+ +..||+|.++.... ...++.+|++++.+++||||+++++++.
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 89 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCV 89 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe
Confidence 4789999999999997532 34799999876432 2357899999999999999999999999
Q ss_pred eCCeEEEEEeecCCCChhHhhcCCC----------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCC
Q 006903 412 SKQEKLLVYEYQPNGSLFNLLHGSE----------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLK 475 (626)
Q Consensus 412 ~~~~~~lv~Ey~~~g~L~~~l~~~~----------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlk 475 (626)
..+..++||||+++|+|.+++.... ....++|..+.+++.|++.||.||| +.+|+|||||
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~ivH~dlk 165 (304)
T cd05096 90 DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS----SLNFVHRDLA 165 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH----HCCccccCcc
Confidence 9999999999999999999985321 1135788999999999999999999 6799999999
Q ss_pred CCCeeeCCCCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc--CCCCCCCC
Q 006903 476 SNNILFNNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT--GKLVQNNG 548 (626)
Q Consensus 476 p~NILl~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt--g~~p~~~~ 548 (626)
|+|||+++++.+||+|||+++...... ....++..|++||......++.++|||||||++|||++ +..|+...
T Consensus 166 p~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 245 (304)
T cd05096 166 TRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGEL 245 (304)
T ss_pred hhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcC
Confidence 999999999999999999986532211 11223567899998877788999999999999999987 45566532
Q ss_pred cchhHHHH---HHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 549 FNLATWVH---SVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 549 ~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
+..+... ........ ... ...++.++..+.+++.+||+.||++|||+.||.+.|++
T Consensus 246 -~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 246 -TDEQVIENAGEFFRDQGR-QVY------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred -CHHHHHHHHHHHhhhccc-ccc------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 2111111 11111100 000 00111234468899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=329.25 Aligned_cols=237 Identities=19% Similarity=0.252 Sum_probs=192.7
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
++||+|+||.||+++. .+|+.||+|+++.... ....+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999984 5789999999875431 2245778999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Ccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~ 503 (626)
+|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+|||++.++.+||+|||+++.... ...
T Consensus 81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH----~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 153 (323)
T cd05571 81 ELFFHLSR---ERVFSEDRARFYGAEIVSALGYLH----SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc
Confidence 99999863 346899999999999999999999 67999999999999999999999999999865321 223
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...++..|++||......++.++|||||||++|||+||+.||.... .......+...... .+.....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-~~~~~~~~~~~~~~------------~p~~~~~ 220 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-HEKLFELILMEEIR------------FPRTLSP 220 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC-HHHHHHHHHcCCCC------------CCCCCCH
Confidence 3457889999999988888999999999999999999999997432 22222222221110 1112233
Q ss_pred HHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 584 KLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
.+.+++.+||+.||++|| ++.++++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 221 EAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 578899999999999999 7888865
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=335.22 Aligned_cols=249 Identities=20% Similarity=0.363 Sum_probs=194.6
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .++..||||.++.... ..+.+.+|+++++.+ +|||||+++++|...+..++|||
T Consensus 43 ~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~e 122 (374)
T cd05106 43 GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITE 122 (374)
T ss_pred hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHh
Confidence 58899999999999873 2345899999976442 235688999999999 89999999999999999999999
Q ss_pred ecCCCChhHhhcCCC-----------------------------------------------------------------
Q 006903 422 YQPNGSLFNLLHGSE----------------------------------------------------------------- 436 (626)
Q Consensus 422 y~~~g~L~~~l~~~~----------------------------------------------------------------- 436 (626)
|+++|+|.++++...
T Consensus 123 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (374)
T cd05106 123 YCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEED 202 (374)
T ss_pred hccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhc
Confidence 999999999985321
Q ss_pred --CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccc-----ccccc
Q 006903 437 --NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF-----LAQTS 509 (626)
Q Consensus 437 --~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~-----~~~~~ 509 (626)
....+++....+++.|++.||.||| +++|+||||||+|||+++++.+||+|||+++........ ..++.
T Consensus 203 ~~~~~~l~~~~~~~i~~qi~~aL~yLH----~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~ 278 (374)
T cd05106 203 TEDSWPLDLDDLLRFSSQVAQGMDFLA----SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPV 278 (374)
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHHHHH----HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCcc
Confidence 0124788999999999999999999 679999999999999999999999999998653322111 12344
Q ss_pred ccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHH
Q 006903 510 SLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQV 588 (626)
Q Consensus 510 ~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 588 (626)
.|++||......++.++|||||||++|||++ |+.||.......... ........... +......+.++
T Consensus 279 ~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~l~~l 347 (374)
T cd05106 279 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFY-KMVKRGYQMSR----------PDFAPPEIYSI 347 (374)
T ss_pred ceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHH-HHHHcccCccC----------CCCCCHHHHHH
Confidence 6999999887888999999999999999997 999986432222111 11111111000 01113458889
Q ss_pred HhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 589 ALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 589 ~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
+.+||+.||++|||+.+|+++|+++.
T Consensus 348 i~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 348 MKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 99999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=323.71 Aligned_cols=239 Identities=17% Similarity=0.206 Sum_probs=195.6
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 85 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPG 85 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCC
Confidence 368999999999999954 68999999986432 1235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|.+++.. ...+++.....++.|++.||+||| +++|+||||||+|||++.++.+||+|||++..........
T Consensus 86 ~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 86 GELFSYLRN---SGRFSNSTGLFYASEIVCALEYLH----SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 999999963 346889999999999999999999 6899999999999999999999999999987654444445
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++|||||||++|||+||+.||.... ..+....+...... .+......+
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~------------~~~~~~~~~ 225 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN-PFGIYEKILAGKLE------------FPRHLDLYA 225 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCcC------------CCccCCHHH
Confidence 67888999999888888999999999999999999999987532 23333333222110 011112347
Q ss_pred HHHHhhccCCCCCCCCC-----HHHHHHH
Q 006903 586 LQVALRCINQSPNERPS-----MNQVAVM 609 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs-----~~ev~~~ 609 (626)
.+++.+||+.||.+||+ ++|+++.
T Consensus 226 ~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 226 KDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 88999999999999995 8887764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=329.08 Aligned_cols=238 Identities=16% Similarity=0.200 Sum_probs=195.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++..++..++||||+++
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 102 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVG 102 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCC
Confidence 47899999999999995 468999999987532 2235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|.+++.. ...+++.....++.|++.||+||| +++|+||||||+|||++.++.+||+|||++..........
T Consensus 103 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 175 (329)
T PTZ00263 103 GELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLH----SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTL 175 (329)
T ss_pred ChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCccee
Confidence 999999963 346888899999999999999999 6799999999999999999999999999987655444445
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++|||||||++|||+||+.||.+... .+....+...... . +......+
T Consensus 176 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~--~----------p~~~~~~~ 242 (329)
T PTZ00263 176 CGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-FRIYEKILAGRLK--F----------PNWFDGRA 242 (329)
T ss_pred cCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH-HHHHHHHhcCCcC--C----------CCCCCHHH
Confidence 678899999998888889999999999999999999999975432 2222333222110 0 00112347
Q ss_pred HHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 586 LQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
.+++.+||+.||++||+ +++++.
T Consensus 243 ~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 243 RDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred HHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 78999999999999997 677764
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=314.64 Aligned_cols=239 Identities=19% Similarity=0.312 Sum_probs=203.8
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCH----HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS----EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~----~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||+|.||+|-+|. ...|+.||||.+++..... -.+.+||++|+.++||||+.++.+|...+...|||||..+|
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~G 138 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGG 138 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCc
Confidence 679999999999998 5779999999998876433 24789999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--ccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QSF 504 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~~ 504 (626)
.|++|+.. .+.++..+...++.||..|+.|+| .+++||||||.+|||||.++++||+|||++-..... ...
T Consensus 139 eLYDYiSe---r~~LsErEaRhfFRQIvSAVhYCH----knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqT 211 (668)
T KOG0611|consen 139 ELYDYISE---RGSLSEREARHFFRQIVSAVHYCH----KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQT 211 (668)
T ss_pred cHHHHHHH---hccccHHHHHHHHHHHHHHHHHHh----hccceecccchhheeecCCCCeeeeccchhhhhccccHHHH
Confidence 99999964 457999999999999999999999 789999999999999999999999999998654332 245
Q ss_pred cccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 505 LAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
++|.+.|+.||+..+.+| ++.+|-||+||+||.|+.|..||+ |.+....++.+.+..+... +.+.
T Consensus 212 FCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFD-G~Dhk~lvrQIs~GaYrEP-------------~~PS 277 (668)
T KOG0611|consen 212 FCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFD-GRDHKRLVRQISRGAYREP-------------ETPS 277 (668)
T ss_pred hcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccC-CchHHHHHHHhhcccccCC-------------CCCc
Confidence 678899999999988776 688999999999999999999997 4566666666666654321 1112
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
...-|+.+++..+|++|-|+.+|.....
T Consensus 278 dA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 278 DASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred hHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 2456788999999999999999988653
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=312.30 Aligned_cols=246 Identities=22% Similarity=0.364 Sum_probs=200.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...+++.||+|.++......+++.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 90 (261)
T cd05068 11 LRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLE 90 (261)
T ss_pred EEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHH
Confidence 47899999999999998778899999998766667889999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----ccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS----FLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~----~~~ 506 (626)
++.... ...+++..+..++.+++.||.||| +++|+||||||+||++++++.+||+|||++........ ...
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 165 (261)
T cd05068 91 YLQGGA-GRALKLPQLIDMAAQVASGMAYLE----AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAK 165 (261)
T ss_pred HHhccC-CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCc
Confidence 996432 356899999999999999999999 67999999999999999999999999999865432211 111
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.+..|++||......++.++||||||+++|||+| |+.||.... ........... .... ........+
T Consensus 166 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~-~~~~----------~~~~~~~~~ 233 (261)
T cd05068 166 FPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT-NAEVLQQVDQG-YRMP----------CPPGCPKEL 233 (261)
T ss_pred CceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcC-CCCC----------CCCcCCHHH
Confidence 2346899998887788999999999999999999 888886432 22222222111 1100 111233468
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.+++.+||+.+|++||++.++++.|+++
T Consensus 234 ~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 234 YDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 8999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=325.31 Aligned_cols=235 Identities=19% Similarity=0.259 Sum_probs=190.4
Q ss_pred cccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 354 LGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 354 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
||+|+||.||+|+. .+++.||+|.++... .....+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999985 468899999986532 2235678899999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Ccccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~~ 505 (626)
.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.... .....
T Consensus 81 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 153 (312)
T cd05585 81 FHHLQR---EGRFDLSRARFYTAELLCALENLH----KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTF 153 (312)
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccc
Confidence 999963 346899999999999999999999 68999999999999999999999999999865322 12234
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++|||||||++|||+||+.||... +..+........... .+......+
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~-~~~~~~~~~~~~~~~------------~~~~~~~~~ 220 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE-NVNEMYRKILQEPLR------------FPDGFDRDA 220 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC-CHHHHHHHHHcCCCC------------CCCcCCHHH
Confidence 5788999999998888899999999999999999999999743 333333333322111 111122357
Q ss_pred HHHHhhccCCCCCCCCC---HHHHHH
Q 006903 586 LQVALRCINQSPNERPS---MNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs---~~ev~~ 608 (626)
.+++.+||+.||++||+ +.|++.
T Consensus 221 ~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 221 KDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred HHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 78899999999999986 455544
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=312.50 Aligned_cols=246 Identities=22% Similarity=0.342 Sum_probs=199.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|.. ++++.||+|.+.......+++.+|++++++++||||+++++++..++..+++|||+++++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (263)
T cd05052 11 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 90 (263)
T ss_pred eeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHH
Confidence 47799999999999985 45889999998865555678999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----cc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS----FL 505 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~----~~ 505 (626)
+++... ....+++..++.++.|++.||+||| +++++||||||+||++++++.+||+|||++........ ..
T Consensus 91 ~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~ 165 (263)
T cd05052 91 DYLREC-NRQEVNAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 165 (263)
T ss_pred HHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCC
Confidence 999642 2346899999999999999999999 67999999999999999999999999999865432211 11
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..+..|++||......++.++|||||||++|||+| |..|+.. .+..+........ ...+ .+...+..
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~-~~~~~~~~~~~~~-~~~~----------~~~~~~~~ 233 (263)
T cd05052 166 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLEKG-YRME----------RPEGCPPK 233 (263)
T ss_pred CCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHCC-CCCC----------CCCCCCHH
Confidence 12346899998877788999999999999999998 8888764 2333333332221 1111 11122345
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 585 LLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
+.+++.+||+.+|++||++.+++++|+++
T Consensus 234 ~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 234 VYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 88899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=312.13 Aligned_cols=246 Identities=20% Similarity=0.353 Sum_probs=199.4
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...++..||+|.+.......+.+.+|+.++++++|+||+++++++...+..+++|||+++|+|.+
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 90 (261)
T cd05072 11 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLD 90 (261)
T ss_pred eeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHH
Confidence 47899999999999998888899999987655566789999999999999999999999998899999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
+++.. ....+++..++.++.+++.||+||| +.+++||||||+||++++++.+|++|||++....... ....
T Consensus 91 ~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH----~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 165 (261)
T cd05072 91 FLKSD-EGGKVLLPKLIDFSAQIAEGMAYIE----RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAK 165 (261)
T ss_pred HHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCc
Confidence 99643 2356889999999999999999999 6799999999999999999999999999986543221 1122
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++|||||||++|||+| |+.||.... ..+........ .... ........+
T Consensus 166 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-~~~~~~~~~~~-~~~~----------~~~~~~~~~ 233 (261)
T cd05072 166 FPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS-NSDVMSALQRG-YRMP----------RMENCPDEL 233 (261)
T ss_pred cceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC-HHHHHHHHHcC-CCCC----------CCCCCCHHH
Confidence 3456999998877778899999999999999999 888886422 22222222211 1110 001123457
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.+++.+||+.+|++||+++++.+.|+++
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 234 YDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 8899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=319.20 Aligned_cols=242 Identities=21% Similarity=0.228 Sum_probs=192.8
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|. ..+|+.||+|.+..... ....+.+|++++++++|+||+++++++.+.+..++||||+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNG 84 (285)
T ss_pred EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCC
Confidence 3689999999999998 46799999999865431 224578999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--c
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--S 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~ 503 (626)
|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||++....... .
T Consensus 85 g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH----~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (285)
T cd05631 85 GDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQ----RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVR 159 (285)
T ss_pred CcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeec
Confidence 9999888532 2346899999999999999999999 6899999999999999999999999999986543221 2
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchh--HHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLA--TWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
...++..|++||......++.++|||||||++|||++|+.||....... +.+....... .. ......
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~----------~~~~~~ 228 (285)
T cd05631 160 GRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED-QE----------EYSEKF 228 (285)
T ss_pred CCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc-cc----------cCCccC
Confidence 3456888999999988888999999999999999999999997543211 1111111110 00 011122
Q ss_pred HHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
...+.+++.+||+.||++||+ ++++++
T Consensus 229 s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 229 SEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 345788999999999999997 788876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=323.23 Aligned_cols=238 Identities=19% Similarity=0.319 Sum_probs=196.6
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.||+|.||.||||. ..+++.||+|++.... ...+++.+|+.++..++|+||.+++|.|..+..+|++||||.+|++
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv 98 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSV 98 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcch
Confidence 789999999999998 5679999999998654 3347899999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+.|. .+..++...+.-|++++..|+.|+| ..+.+|||||+.|||+..+|.+|++|||.+...... ....
T Consensus 99 ~~lL~---~~~~~~E~~i~~ilre~l~~l~ylH----~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tf 171 (467)
T KOG0201|consen 99 LDLLK---SGNILDEFEIAVILREVLKGLDYLH----SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTF 171 (467)
T ss_pred hhhhc---cCCCCccceeeeehHHHHHHhhhhh----hcceecccccccceeEeccCcEEEEecceeeeeechhhccccc
Confidence 99995 3344577777889999999999999 678999999999999999999999999997654332 2456
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.||++|||||++....|+.|+||||+|++.+||++|.+|+.+...+...+ .+. +-..|. ........+
T Consensus 172 vGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf-lIp------k~~PP~-----L~~~~S~~~ 239 (467)
T KOG0201|consen 172 VGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF-LIP------KSAPPR-----LDGDFSPPF 239 (467)
T ss_pred cccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE-ecc------CCCCCc-----cccccCHHH
Confidence 78999999999998899999999999999999999999987543311100 000 000111 112344568
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+++..|+.+||+.||++.++++
T Consensus 240 kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 240 KEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred HHHHHHHhhcCcccCcCHHHHhh
Confidence 89999999999999999999876
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=330.97 Aligned_cols=250 Identities=18% Similarity=0.304 Sum_probs=196.0
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||+|... .+..||||+++.... ..+.+.+|+++++++. ||||+++++++...+..++|||
T Consensus 42 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 121 (400)
T cd05105 42 GRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITE 121 (400)
T ss_pred hheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEE
Confidence 478999999999999842 235799999975432 3457899999999996 9999999999999999999999
Q ss_pred ecCCCChhHhhcCCC-----------------------------------------------------------------
Q 006903 422 YQPNGSLFNLLHGSE----------------------------------------------------------------- 436 (626)
Q Consensus 422 y~~~g~L~~~l~~~~----------------------------------------------------------------- 436 (626)
|+++|+|.++++...
T Consensus 122 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (400)
T cd05105 122 YCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYS 201 (400)
T ss_pred ecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhh
Confidence 999999999886421
Q ss_pred ----------------------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeE
Q 006903 437 ----------------------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPC 488 (626)
Q Consensus 437 ----------------------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~k 488 (626)
....+++..++.++.|++.||.||| +.+|+||||||+|||+++++.+|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivH~dikp~Nill~~~~~~k 277 (400)
T cd05105 202 DIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA----SKNCVHRDLAARNVLLAQGKIVK 277 (400)
T ss_pred hcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChHhEEEeCCCEEE
Confidence 0134788899999999999999999 67999999999999999999999
Q ss_pred EeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcc
Q 006903 489 ISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREE 562 (626)
Q Consensus 489 l~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 562 (626)
|+|||+++...... ....++..|++||......++.++|||||||++|||++ |..||............. ...
T Consensus 278 L~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~-~~~ 356 (400)
T cd05105 278 ICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI-KSG 356 (400)
T ss_pred EEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH-hcC
Confidence 99999986532221 11234566999999887888999999999999999997 888886432221211111 111
Q ss_pred cccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 563 WTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 563 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
.... ........+.+++.+||+.||++||++.+|.++|+++.+
T Consensus 357 ~~~~----------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 357 YRMA----------KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred CCCC----------CCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1110 112234468899999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=323.79 Aligned_cols=237 Identities=19% Similarity=0.259 Sum_probs=191.1
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
++||+|+||.||++.. .+|..||+|.++.... ....+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3699999999999984 5789999999875421 2245778999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Ccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~ 503 (626)
+|.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||++..... ...
T Consensus 81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 153 (323)
T cd05595 81 ELFFHLSR---ERVFTEERARFYGAEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccc
Confidence 99998853 346899999999999999999999 67999999999999999999999999999764221 112
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...++..|++||......++.++|||||||++|||++|+.||..... ............. .+.....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-~~~~~~~~~~~~~------------~p~~~~~ 220 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILMEEIR------------FPRTLSP 220 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCCCC------------CCCCCCH
Confidence 34578889999998888889999999999999999999999864322 2222222221110 0111233
Q ss_pred HHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 584 KLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
.+.+++.+||+.||++|| ++.++++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 221 EAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 577889999999999998 7888765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=320.81 Aligned_cols=241 Identities=19% Similarity=0.242 Sum_probs=194.1
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
-.+||+|+||.||.|+ ..+|..+|+|++++... ..+.++.|-.+|...++|+||+|+..|.+.+.+||||||+||
T Consensus 146 Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPG 225 (550)
T KOG0605|consen 146 LKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPG 225 (550)
T ss_pred heeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCC
Confidence 3789999999999998 56799999999988652 235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC------
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN------ 499 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~------ 499 (626)
|++..+|. ....|+......++.+.+.|+.-+| ..|+|||||||+|+|||..|++|++||||+....
T Consensus 226 GD~mTLL~---~~~~L~e~~arfYiaE~vlAI~~iH----~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~ 298 (550)
T KOG0605|consen 226 GDMMTLLM---RKDTLTEDWARFYIAETVLAIESIH----QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE 298 (550)
T ss_pred ccHHHHHH---hcCcCchHHHHHHHHHHHHHHHHHH----HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhh
Confidence 99999995 4467999999999999999999999 6899999999999999999999999999963100
Q ss_pred -------------C------C-----c--------------------cccccccccchhhccccCCCCCcchhHHHHHHH
Q 006903 500 -------------H------D-----Q--------------------SFLAQTSSLKINDISNQMCSTIKADVYGFGVIL 535 (626)
Q Consensus 500 -------------~------~-----~--------------------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl 535 (626)
. . . ....||+.|+|||++.+..|+..+|+||+|||+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Im 378 (550)
T KOG0605|consen 299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIM 378 (550)
T ss_pred hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHH
Confidence 0 0 0 013578999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 006903 536 LELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPS---MNQVAV 608 (626)
Q Consensus 536 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~ev~~ 608 (626)
|||+.|.+||........|-+.. .-.......+. .....+..++|.+|+. ||++|-- ++||.+
T Consensus 379 yEmLvGyPPF~s~tp~~T~rkI~-nwr~~l~fP~~--------~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 379 YEMLVGYPPFCSETPQETYRKIV-NWRETLKFPEE--------VDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHH-HHhhhccCCCc--------CcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 99999999998665544443322 21111111111 1112457888999998 9999964 666644
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=310.31 Aligned_cols=242 Identities=21% Similarity=0.338 Sum_probs=195.6
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||++...++..+|+|.+........++.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 9 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 88 (256)
T cd05059 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLN 88 (256)
T ss_pred hhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHH
Confidence 47899999999999998777889999987666666789999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccc----cc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF----LA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~----~~ 506 (626)
++... ...+++..++.++.|++.||+||| +.+|+||||||+||++++++.+|++|||+++........ ..
T Consensus 89 ~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 162 (256)
T cd05059 89 YLRER--KGKLGTEWLLDMCSDVCEAMEYLE----SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTK 162 (256)
T ss_pred HHHhc--ccCCCHHHHHHHHHHHHHHHHHHH----HCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCC
Confidence 99642 236899999999999999999999 679999999999999999999999999998654322111 11
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.+..|++||......++.++||||||+++|||+| |+.||..... .+........ .... .+...+..+
T Consensus 163 ~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~~-~~~~----------~~~~~~~~~ 230 (256)
T cd05059 163 FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN-SEVVESVSAG-YRLY----------RPKLAPTEV 230 (256)
T ss_pred CCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH-HHHHHHHHcC-CcCC----------CCCCCCHHH
Confidence 2235899998887788999999999999999999 7888864322 2222222111 1000 011234468
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
.+++.+||+.+|++|||+.|+++.|
T Consensus 231 ~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 231 YTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHh
Confidence 8999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=325.09 Aligned_cols=239 Identities=15% Similarity=0.178 Sum_probs=194.4
Q ss_pred ccccccCCCcceEEEEeCC--CcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLDD--GLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~--g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|...+ +..||+|.+.... ...+.+.+|+++++.++||||+++++++.+++..++||||++
T Consensus 35 ~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~ 114 (340)
T PTZ00426 35 IRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVI 114 (340)
T ss_pred EEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCC
Confidence 4789999999999998543 3689999986432 233568899999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccc
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF 504 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~ 504 (626)
+|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++.........
T Consensus 115 ~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~ 187 (340)
T PTZ00426 115 GGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQ----SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYT 187 (340)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcce
Confidence 9999999963 346899999999999999999999 689999999999999999999999999998765544445
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++|||||||++|||+||+.||..... ......+...... + +......
T Consensus 188 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-~~~~~~i~~~~~~---~---------p~~~~~~ 254 (340)
T PTZ00426 188 LCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP-LLIYQKILEGIIY---F---------PKFLDNN 254 (340)
T ss_pred ecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH-HHHHHHHhcCCCC---C---------CCCCCHH
Confidence 5678899999998888889999999999999999999999975432 2222233222111 0 0111234
Q ss_pred HHHHHhhccCCCCCCCC-----CHHHHHHH
Q 006903 585 LLQVALRCINQSPNERP-----SMNQVAVM 609 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RP-----s~~ev~~~ 609 (626)
+.+++.+|++.||++|+ +++++++.
T Consensus 255 ~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 255 CKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 67889999999999995 88888764
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=313.47 Aligned_cols=247 Identities=20% Similarity=0.339 Sum_probs=195.9
Q ss_pred ccccccCCCcceEEEEeCC------CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLDD------GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~------g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.... ...||+|.++.... ..+++.+|++.+++++||||+++++++...+..+++|||
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~ 89 (283)
T cd05048 10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEY 89 (283)
T ss_pred hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEec
Confidence 3789999999999998532 26799999875432 235689999999999999999999999988899999999
Q ss_pred cCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEE
Q 006903 423 QPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCI 489 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl 489 (626)
+++|+|.+++..... ...+++..++.++.|++.||.||| +++|+||||||+||++++++.+||
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH----~~~i~H~dlkp~Nil~~~~~~~~L 165 (283)
T cd05048 90 LAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS----SHHFVHRDLAARNCLVGEGLTVKI 165 (283)
T ss_pred CCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccccceEEEcCCCcEEE
Confidence 999999999964211 145889999999999999999999 679999999999999999999999
Q ss_pred eeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccc
Q 006903 490 SEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEW 563 (626)
Q Consensus 490 ~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 563 (626)
+|||++....... ....++..|++||......++.++|||||||++|||+| |..||... ...+....+....
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~-~~~~~~~~i~~~~- 243 (283)
T cd05048 166 SDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGF-SNQEVIEMIRSRQ- 243 (283)
T ss_pred CCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHcCC-
Confidence 9999986432211 11233567999998877778999999999999999998 99898643 2223322222111
Q ss_pred ccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 564 TVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 564 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.. ..+...+..+.+++.+||+.||++||++.||++.|+.+
T Consensus 244 ~~----------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 244 LL----------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred cC----------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11 11223445688999999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=309.91 Aligned_cols=243 Identities=20% Similarity=0.279 Sum_probs=196.3
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...++..+|+|.+.......+++.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~ 88 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLN 88 (256)
T ss_pred eeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHH
Confidence 36799999999999998777789999998666667789999999999999999999999998888999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----ccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS----FLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~----~~~ 506 (626)
++... ...+++..++.++.+++.||+||| +.+|+||||||+||++++++.+||+|||.++....... ...
T Consensus 89 ~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~ 162 (256)
T cd05113 89 YLREH--GKRFQPSQLLEMCKDVCEGMAYLE----SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSK 162 (256)
T ss_pred HHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCc
Confidence 99642 236899999999999999999999 67999999999999999999999999999764322211 112
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++|||||||++|||+| |+.||.... ..+............ ........+
T Consensus 163 ~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~ 230 (256)
T cd05113 163 FPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN-NSETVEKVSQGLRLY-----------RPHLASEKV 230 (256)
T ss_pred cChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC-HHHHHHHHhcCCCCC-----------CCCCCCHHH
Confidence 3456899998877778899999999999999999 888886332 222222222221110 001123458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
.+++.+||+.+|++||++.++++.|+
T Consensus 231 ~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 231 YAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 89999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=301.06 Aligned_cols=250 Identities=17% Similarity=0.173 Sum_probs=194.0
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEe--CCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCS--KQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~--~~~~~lv~Ey~~~ 425 (626)
+.|++|.||.||+|+ .++++.||+|+++.... -.-...+||.+|.+++|||||.+..+... -+..|+|||||+.
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh 161 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH 161 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh
Confidence 789999999999999 56799999999986441 12346899999999999999999887654 4679999999987
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---c
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---Q 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~ 502 (626)
||..++..- .++|...+...++.|+++|+.||| .+.|+||||||+|+|+.+.|.+||+|||+|+..... .
T Consensus 162 -DLksl~d~m--~q~F~~~evK~L~~QlL~glk~lH----~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~ 234 (419)
T KOG0663|consen 162 -DLKSLMETM--KQPFLPGEVKTLMLQLLRGLKHLH----DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPY 234 (419)
T ss_pred -hHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHh----hceeEecccchhheeeccCCcEEecccchhhhhcCCcccC
Confidence 999999743 368999999999999999999999 678999999999999999999999999999987655 3
Q ss_pred cccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHH---------H
Q 006903 503 SFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV---------L 572 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~---------~ 572 (626)
+...-|.+|.+||+.. ...|++..|+||+|||+.||+++++.|.+..++.+..+....-+...+..-+. .
T Consensus 235 T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~ 314 (419)
T KOG0663|consen 235 TPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKM 314 (419)
T ss_pred cceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhcc
Confidence 4456688999999765 45789999999999999999999998876555544332221111111100000 0
Q ss_pred H---------hhhccHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 I---------AEAASEE-RMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~---------~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. ...+... ....-++++...+.+||.+|.|++|.++
T Consensus 315 ~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 315 TFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0 0000000 1245678889999999999999999875
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=308.54 Aligned_cols=243 Identities=20% Similarity=0.302 Sum_probs=191.9
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.||+|+||.||+|.. .+++.||+|.+..... ....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3699999999999985 5789999998865432 235689999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc-----
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS----- 503 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~----- 503 (626)
.+++.. ....+++..++.++.|++.||+||| +++|+||||||+||+++.++.+|++|||++........
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 81 LTFLRT--EGPRLKVKELIQMVENAAAGMEYLE----SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 999963 2346899999999999999999999 67999999999999999999999999999764322111
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....+..|++||......++.++|||||||++|||++ |..|+..... ......... ..... .+....
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-~~~~~~~~~-~~~~~----------~~~~~~ 222 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN-QQTREAIEQ-GVRLP----------CPELCP 222 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-HHHHHHHHc-CCCCC----------CcccCC
Confidence 1112345899998877778999999999999999998 8777753222 111111111 10100 111223
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
..+.+++.+||+.+|++|||+.++.++|+.
T Consensus 223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 223 DAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 468889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=323.31 Aligned_cols=238 Identities=19% Similarity=0.252 Sum_probs=192.7
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
++||+|+||.||++.. .+|+.||+|++..... ....+.+|+++++.++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999984 5789999999975431 2346788999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Ccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~ 503 (626)
+|.+++.. ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++.... ...
T Consensus 81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 153 (328)
T cd05593 81 ELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLH----SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMK 153 (328)
T ss_pred CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccc
Confidence 99999853 346899999999999999999999 67999999999999999999999999999865322 122
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...++..|++||......++.++|||||||++|||+||+.||.... ..+....+...... .+.....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~-~~~~~~~~~~~~~~------------~p~~~~~ 220 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-HEKLFELILMEDIK------------FPRTLSA 220 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC-HHHHHHHhccCCcc------------CCCCCCH
Confidence 3457888999999888888999999999999999999999996432 22333222221110 0111223
Q ss_pred HHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 006903 584 KLLQVALRCINQSPNERP-----SMNQVAVM 609 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RP-----s~~ev~~~ 609 (626)
.+.+++.+||+.||++|| ++.|+++.
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 221 DAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 477889999999999997 88888764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=324.89 Aligned_cols=247 Identities=16% Similarity=0.171 Sum_probs=197.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|++++..++||||+++++++...+..++||||+++
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g 85 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPG 85 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCC
Confidence 468999999999999964 58999999987542 1235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++..........
T Consensus 86 ~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~ 158 (333)
T cd05600 86 GDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALH----ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV 158 (333)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence 999999953 346889999999999999999999 6799999999999999999999999999987654444445
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++|||||||++|||++|+.||... +..+....+......... +.. ..........+
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~~--~~~--~~~~~~~s~~~ 233 (333)
T cd05600 159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGS-TPNETWENLKYWKETLQR--PVY--DDPRFNLSDEA 233 (333)
T ss_pred ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCC-CHHHHHHHHHhccccccC--CCC--CccccccCHHH
Confidence 6788899999988888899999999999999999999999743 222222222211100000 000 00001223457
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+++.+||..+|++||+++|+++.
T Consensus 234 ~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 234 WDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHHhhChhhhcCCHHHHHhC
Confidence 889999999999999999999864
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=320.49 Aligned_cols=248 Identities=17% Similarity=0.288 Sum_probs=194.1
Q ss_pred ccccccCCCcceEEEEe-CCCc----EEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGL----MLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.+ .++. .||+|.++... ...+++.+|+.+++.++||||++++|++... ..++++||+
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~ 90 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM 90 (316)
T ss_pred eeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecC
Confidence 37899999999999985 3344 48999987543 2346788999999999999999999988764 578999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS 503 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~ 503 (626)
++|+|.++++.. ...+++...+.++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++.......
T Consensus 91 ~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH----~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 164 (316)
T cd05108 91 PFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLE----ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK 164 (316)
T ss_pred CCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHH----hcCeeccccchhheEecCCCcEEEccccccccccCCCc
Confidence 999999999742 346889999999999999999999 67999999999999999999999999999875432211
Q ss_pred -----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 504 -----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 504 -----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....+..|++||......++.++|||||||++|||+| |+.|+.+. ...++.. ......... .
T Consensus 165 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~-~~~~~~~-~~~~~~~~~----------~ 232 (316)
T cd05108 165 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISS-ILEKGERLP----------Q 232 (316)
T ss_pred ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-CHHHHHH-HHhCCCCCC----------C
Confidence 1122456899998888888999999999999999998 88888643 2222222 211111100 0
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
+..+...+.+++.+||+.+|++||++.+++..|..+..+.
T Consensus 233 ~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 233 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 1112335788999999999999999999999999886543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=324.28 Aligned_cols=259 Identities=21% Similarity=0.315 Sum_probs=208.4
Q ss_pred cccchhhhhcccccccccCCCcceEEEEeCC---C--cEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEE
Q 006903 339 NKLKFEDLLRAPAELLGRGKHGSLYRVVLDD---G--LMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411 (626)
Q Consensus 339 ~~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~~---g--~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~ 411 (626)
+.+.+..-...+++.||+|.||.||+|.+-+ | .-||||..+... ...+.|..|.-+|+.++|||||+++|+|.
T Consensus 382 rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~ 461 (974)
T KOG4257|consen 382 RNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV 461 (974)
T ss_pred CcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee
Confidence 3333333333457899999999999998532 3 358999988754 34578999999999999999999999876
Q ss_pred eCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEee
Q 006903 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISE 491 (626)
Q Consensus 412 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~D 491 (626)
. ...|+|||.++-|.|+.||.. +...++......++.||+.||+||| +.++|||||..+|||+.....+|++|
T Consensus 462 e-~P~WivmEL~~~GELr~yLq~--nk~sL~l~tL~ly~~Qi~talaYLe----SkrfVHRDIAaRNiLVsSp~CVKLaD 534 (974)
T KOG4257|consen 462 E-QPMWIVMELAPLGELREYLQQ--NKDSLPLRTLTLYCYQICTALAYLE----SKRFVHRDIAARNILVSSPQCVKLAD 534 (974)
T ss_pred c-cceeEEEecccchhHHHHHHh--ccccchHHHHHHHHHHHHHHHHHHH----hhchhhhhhhhhheeecCcceeeecc
Confidence 4 679999999999999999974 3457888999999999999999999 78999999999999999999999999
Q ss_pred ccCccccCCCccccc----cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccc
Q 006903 492 YGLIVTENHDQSFLA----QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVE 566 (626)
Q Consensus 492 FGl~~~~~~~~~~~~----~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 566 (626)
||+++....+..+.+ -+..||+||.+.....+.++|||-|||.+||++. |..||..-.+. +.+-.+..++
T Consensus 535 FGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs-DVI~~iEnGe---- 609 (974)
T KOG4257|consen 535 FGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS-DVIGHIENGE---- 609 (974)
T ss_pred cchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc-ceEEEecCCC----
Confidence 999987665544332 2446899999998999999999999999999987 88998732221 1111111111
Q ss_pred cccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 567 VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 567 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
....++.|++.++.++.+||+++|.+||++.|+...|+.+..+
T Consensus 610 -------RlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe 652 (974)
T KOG4257|consen 610 -------RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE 652 (974)
T ss_pred -------CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence 1124567888899999999999999999999999999988764
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-37 Score=319.37 Aligned_cols=253 Identities=19% Similarity=0.226 Sum_probs=194.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+++. .++..||+|.+..... ..+.+.+|++++++++||||+++++++..++..++||||+++|+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 89 (331)
T cd06649 10 ISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 89 (331)
T ss_pred EEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCc
Confidence 36799999999999995 4688999999875432 23578999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-Cccccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-DQSFLA 506 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~~~~~~ 506 (626)
|.+++.. ...+++..+..++.+++.||.|||+ ..+|+||||||+|||++.++.+||+|||++..... ......
T Consensus 90 L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 163 (331)
T cd06649 90 LDQVLKE---AKRIPEEILGKVSIAVLRGLAYLRE---KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (331)
T ss_pred HHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhh---cCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCC
Confidence 9999963 3468899999999999999999994 24699999999999999999999999999864322 223345
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc------c----------------
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW------T---------------- 564 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~------~---------------- 564 (626)
++..|++||......++.++|||||||++|||+||+.||..... .+.......... .
T Consensus 164 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
T cd06649 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDA-KELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG 242 (331)
T ss_pred CCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHhcccccccccCCccccCcccccccccccc
Confidence 78889999998888889999999999999999999999864321 111111100000 0
Q ss_pred -----------cccccHHHHh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 565 -----------VEVFDEVLIA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 565 -----------~~~~d~~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
.+..+..... ..........+.+++.+||+.||++|||++|+++.-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0000000000 000011234688999999999999999999998754
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=316.14 Aligned_cols=251 Identities=18% Similarity=0.204 Sum_probs=191.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||||.++... .....+.+|+++++.++||||+++++++.+++..++||||++ ++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~ 88 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TD 88 (303)
T ss_pred eeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cC
Confidence 368999999999999954 78999999987543 233567899999999999999999999999999999999996 68
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~ 504 (626)
|.+++.. ....+++..+..++.|++.||+||| +++|+||||||+|||+++++.+||+|||++...... ...
T Consensus 89 l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 162 (303)
T cd07869 89 LCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIH----QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSN 162 (303)
T ss_pred HHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCC
Confidence 8888753 2346888999999999999999999 679999999999999999999999999998643221 122
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-------ccc----ccccH--
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-------WTV----EVFDE-- 570 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-------~~~----~~~d~-- 570 (626)
..++..|++||.... ..++.++|||||||++|||+||+.||....+..+......... +.. ..+++
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (303)
T cd07869 163 EVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPER 242 (303)
T ss_pred CcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccccc
Confidence 346778999998654 4578899999999999999999999976544444333222100 000 00000
Q ss_pred -------HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 -------VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 -------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+............+.+++.+|++.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 243 FTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000000011235778999999999999999999986
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-37 Score=313.20 Aligned_cols=251 Identities=15% Similarity=0.146 Sum_probs=191.4
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|+.. +++.||+|+++... ...+.+.+|+++++.++||||+++++++...+..++||||++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 85 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKN 85 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCC
Confidence 467999999999999964 68899999987543 23456889999999999999999999999999999999999987
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD----Q 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~----~ 502 (626)
.+..+.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... .
T Consensus 86 ~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 86 MLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCH----KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred HHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 7765543 2346889999999999999999999 679999999999999999999999999998653321 1
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHH--hh------------cccccccc
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV--VR------------EEWTVEVF 568 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~--~~------------~~~~~~~~ 568 (626)
....++..|++||......++.++|||||||++|||++|+.||............. .. ........
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 22356788999999877778999999999999999999999997543322211110 00 00000000
Q ss_pred cHHHHh-----hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 569 DEVLIA-----EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 569 d~~~~~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.... ..........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000 0001112345889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=330.03 Aligned_cols=251 Identities=20% Similarity=0.335 Sum_probs=203.5
Q ss_pred cccccccCCCcceEEEE-eCCC----cEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 350 PAELLGRGKHGSLYRVV-LDDG----LMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~-~~~g----~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
...+||+|+||+||||. .++| .+||||++..... ...++..|+-.|.+++|||+++++|+|.... ..||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 35799999999999997 4544 5799999987653 4578999999999999999999999988766 8899999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
||.|+|.+|++. +...+-....+.|..|||+|+.||| ++++|||||.++|||+..-..+||.|||+++....+.
T Consensus 779 mP~G~LlDyvr~--hr~~igsq~lLnw~~QIAkgM~YLe----~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 779 MPLGCLLDYVRE--HRDNIGSQDLLNWCYQIAKGMKYLE----EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred cccchHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHH----hcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 999999999985 3456777888999999999999999 6799999999999999999999999999998765544
Q ss_pred ccc-----ccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 SFL-----AQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 ~~~-----~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
..+ ..+..|++-|.+....++.++|||||||++||++| |..|++ +....+. ...++.... -.
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~-gi~~~eI-~dlle~geR----------Ls 920 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYD-GIPAEEI-PDLLEKGER----------LS 920 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccC-CCCHHHh-hHHHhcccc----------CC
Confidence 222 22345667777888899999999999999999999 778875 3333332 222222211 12
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcccc
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEER 619 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 619 (626)
.++.+...+..++.+||..|++.||+++++...+.++..+..+
T Consensus 921 qPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqr 963 (1177)
T KOG1025|consen 921 QPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQR 963 (1177)
T ss_pred CCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcce
Confidence 3455667789999999999999999999999999988766544
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=307.04 Aligned_cols=247 Identities=21% Similarity=0.299 Sum_probs=190.5
Q ss_pred cccccCCCcceEEEEeC----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEe-CCeEEEEEeecC
Q 006903 352 ELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCS-KQEKLLVYEYQP 424 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-~~~~~lv~Ey~~ 424 (626)
+.||+|+||.||+|... ++..||+|.+..... ..+.+.+|+.+++.++||||+++++++.. ++..+++|||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36899999999999843 246799999864322 23578899999999999999999997764 556889999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-- 502 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-- 502 (626)
+|+|.+++... ...+++..++.++.+++.||+||| +.+|+||||||+|||+++++.+||+|||+++......
T Consensus 81 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLA----SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 99999999642 234678888999999999999999 6799999999999999999999999999986432211
Q ss_pred -----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 -----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 -----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|++||......++.++|||||||++|||++|+.|+....+..+............ .
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 223 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLL-----------Q 223 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC-----------C
Confidence 122345578999988777789999999999999999996554433333333333332221110 0
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
....+..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 224 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 224 PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 11123458899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-37 Score=312.86 Aligned_cols=250 Identities=18% Similarity=0.190 Sum_probs=189.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .+++.||+|.++... .....+.+|++++++++||||+++++++.+++..++||||+++ +
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~ 88 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-D 88 (288)
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-C
Confidence 37899999999999985 468999999987543 2345678999999999999999999999999999999999974 9
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~ 504 (626)
|.+++.. ....+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 89 l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~ 162 (288)
T cd07871 89 LKQYLDN--CGNLMSMHNVKIFMFQLLRGLSYCH----KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSN 162 (288)
T ss_pred HHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccC
Confidence 9998863 2345788999999999999999999 679999999999999999999999999998653221 122
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-------cc--------cccc
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-------WT--------VEVF 568 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-------~~--------~~~~ 568 (626)
..++..|++||.... ..++.++||||+||++|||+||+.||.... ..+.+..+.... +. ....
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
T cd07871 163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST-VKEELHLIFRLLGTPTEETWPGITSNEEFRSYL 241 (288)
T ss_pred ceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChHHhhccccchhhhccc
Confidence 345778999998654 567889999999999999999999986432 222222221100 00 0000
Q ss_pred cHHHHh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 569 DEVLIA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 569 d~~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.... ....+.......+++.+|++.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 242 FPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 0000011235788999999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=312.40 Aligned_cols=250 Identities=19% Similarity=0.328 Sum_probs=198.9
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .++..+|+|.+..... ..+.+.+|++.+++++||||+++++++...+..++||||+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 89 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYM 89 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecC
Confidence 37899999999999973 2356799999876543 2357899999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEe
Q 006903 424 PNGSLFNLLHGSE-------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCIS 490 (626)
Q Consensus 424 ~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~ 490 (626)
++++|.+++.... ....++|..++.++.+++.||+||| +++|+||||||+||++++++.+||+
T Consensus 90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~ 165 (291)
T cd05094 90 KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA----SQHFVHRDLATRNCLVGANLLVKIG 165 (291)
T ss_pred CCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccCcceEEEccCCcEEEC
Confidence 9999999996422 1235899999999999999999999 6899999999999999999999999
Q ss_pred eccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccc
Q 006903 491 EYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWT 564 (626)
Q Consensus 491 DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 564 (626)
|||++....... ....++..|++||......++.++|||||||++|||+| |+.||..... .+..........
T Consensus 166 dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~- 243 (291)
T cd05094 166 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-TEVIECITQGRV- 243 (291)
T ss_pred CCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHhCCCC-
Confidence 999986432211 12234567999998887888999999999999999999 9988764322 222222221111
Q ss_pred cccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 565 VEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 565 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.. .....+..+.+++.+||+.+|++||++.+|+++|+++...
T Consensus 244 ~~----------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 244 LE----------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CC----------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 11 0112234588999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=319.46 Aligned_cols=237 Identities=19% Similarity=0.289 Sum_probs=191.1
Q ss_pred cccccCCCcceEEEEe----CCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
+.||+|+||.||+++. .+++.||+|.++... .....+.+|+++++.++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999984 358899999987532 2234578899999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC--
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-- 500 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-- 500 (626)
+++|+|.+++.. ...+.+.....++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLH----QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999999953 346788888999999999999999 67999999999999999999999999999864221
Q ss_pred -CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 501 -DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 501 -~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
......++..|++||......++.++|||||||++|||++|+.||.... .......+...... .+.
T Consensus 155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~-~~~~~~~~~~~~~~------------~~~ 221 (323)
T cd05584 155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN-RKKTIDKILKGKLN------------LPP 221 (323)
T ss_pred CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCC------------CCC
Confidence 1223457888999999888888999999999999999999999997433 22223333222110 011
Q ss_pred HHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
.....+.+++.+||+.||++|| ++.++++
T Consensus 222 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 222 YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 1223578899999999999999 7888765
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=304.64 Aligned_cols=242 Identities=19% Similarity=0.316 Sum_probs=194.1
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
++||+|+||.||+|...++..+|+|.++..... ...+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 369999999999999888999999998764322 346889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----cc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS----FL 505 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~----~~ 505 (626)
+++... ...+++..+..++.+++.||.|+| +++++||||||+||++++++.+|++|||++........ ..
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH----~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 81 SFLRKK--KDELKTKQLVKFALDAAAGMAYLE----SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 998642 346889999999999999999999 67999999999999999999999999999864322211 11
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..+..|++||......++.++||||||+++||+++ |..||... ........... ..... .+......
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~-~~~~~~~~~~~-~~~~~----------~~~~~~~~ 222 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGM-TNQQAREQVEK-GYRMS----------CPQKCPDD 222 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHHHc-CCCCC----------CCCCCCHH
Confidence 23456899998877778899999999999999999 88888643 22222222211 11111 11122346
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
+.+++.+||+.+|++||++.|++++|.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=322.15 Aligned_cols=239 Identities=19% Similarity=0.256 Sum_probs=191.7
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||+|+||.||++.. .+|+.||+|.+..... ....+.+|+++++.++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999984 5789999999875421 2345778999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Ccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~ 503 (626)
+|.+++.. ...+++..+..++.|++.||.|||+ ..+|+||||||+|||++.++.+||+|||+++.... ...
T Consensus 81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~---~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (325)
T cd05594 81 ELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHS---EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 154 (325)
T ss_pred cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccc
Confidence 99998853 3468999999999999999999993 26899999999999999999999999999864221 122
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...++..|++||......++.++|||||||++|||+||+.||.... ..+....+...... .+.....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~-~~~~~~~i~~~~~~------------~p~~~~~ 221 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-HEKLFELILMEEIR------------FPRTLSP 221 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC-HHHHHHHHhcCCCC------------CCCCCCH
Confidence 3457889999999888888999999999999999999999996432 22222222221110 0111223
Q ss_pred HHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 006903 584 KLLQVALRCINQSPNERP-----SMNQVAVM 609 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RP-----s~~ev~~~ 609 (626)
.+.+++.+||+.||++|+ ++.++++.
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 222 EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 477889999999999996 89998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=304.07 Aligned_cols=249 Identities=18% Similarity=0.231 Sum_probs=192.2
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEe-----CCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCS-----KQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-----~~~~~lv~E 421 (626)
.+.||+|+||.|..+. ..+|+.||||++.... ...+...+|+++|++++|+||+.+++.+.. -+..|+|+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e 106 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE 106 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence 3679999999999998 5679999999997443 344678899999999999999999998765 246899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC--
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN-- 499 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~-- 499 (626)
+|+ -+|.+.++. ++.++......+..|+++||.|+| +.+|+||||||+|+|++.+...||+|||+|+...
T Consensus 107 lMe-tDL~~iik~---~~~L~d~H~q~f~YQiLrgLKyiH----SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~ 178 (359)
T KOG0660|consen 107 LME-TDLHQIIKS---QQDLTDDHAQYFLYQILRGLKYIH----SANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF 178 (359)
T ss_pred HHh-hHHHHHHHc---CccccHHHHHHHHHHHHHhcchhh----cccccccccchhheeeccCCCEEeccccceeecccc
Confidence 995 599999953 455899999999999999999999 7899999999999999999999999999998763
Q ss_pred ---CCccccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc-ccccH----
Q 006903 500 ---HDQSFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV-EVFDE---- 570 (626)
Q Consensus 500 ---~~~~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~d~---- 570 (626)
..-+.+..|.+|.+||+.. ...|+...||||.|||+.||++|++.|.+...+.+ +..+..--... +..-.
T Consensus 179 ~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Q-l~lI~~~lGtP~~e~l~~i~s 257 (359)
T KOG0660|consen 179 FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQ-LQLILELLGTPSEEDLQKIRS 257 (359)
T ss_pred CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHH-HHHHHHhcCCCCHHHHHHhcc
Confidence 2224566789999999764 45789999999999999999999998874433222 22211110000 00000
Q ss_pred -----HHHh---------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 -----VLIA---------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 -----~~~~---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.. ...-+...+..++++.++|..||.+|+|++|+++
T Consensus 258 ~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 258 EKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000 0000122335789999999999999999999976
|
|
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=304.91 Aligned_cols=245 Identities=23% Similarity=0.358 Sum_probs=196.1
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...+...||+|+++......+++.+|++++++++||||+++++++. .+..++||||+++|+|.+
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~ 89 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLD 89 (262)
T ss_pred eeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHH
Confidence 4679999999999999777778999999876666778999999999999999999999764 456899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----ccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS----FLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~----~~~ 506 (626)
++... ....+++..+..++.+++.||+|+| +++|+||||||+||++++++.+||+|||.+........ ...
T Consensus 90 ~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH----~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~ 164 (262)
T cd05071 90 FLKGE-MGKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 164 (262)
T ss_pred HHhhc-cccCCCHHHHHHHHHHHHHHHHHHH----HCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCc
Confidence 99642 2346799999999999999999999 67999999999999999999999999999865332211 122
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++|||||||++|||+| |+.||..... .+......... .. ....+.+..+
T Consensus 165 ~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~-~~~~~~~~~~~-~~----------~~~~~~~~~l 232 (262)
T cd05071 165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGY-RM----------PCPPECPESL 232 (262)
T ss_pred ccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh-HHHHHHHhcCC-CC----------CCccccCHHH
Confidence 3456899998877778999999999999999999 7777764322 22222211110 00 0112334568
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.+++.+||+.+|++||++.++.+.|++.
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 233 HDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 8999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=315.50 Aligned_cols=260 Identities=23% Similarity=0.408 Sum_probs=199.1
Q ss_pred cchhhhhcccccccccCCCcceEEEEeC-CCc--EEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCC
Q 006903 341 LKFEDLLRAPAELLGRGKHGSLYRVVLD-DGL--MLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQ 414 (626)
Q Consensus 341 ~~~~~l~~~~~~~lG~G~fG~Vy~~~~~-~g~--~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~ 414 (626)
+.++++.. .+.||+|+||.||+|... ++. .+|+|.++.... ....+.+|++++.++ +||||+++++++...+
T Consensus 4 ~~~~~~~~--~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 4 LEWNDIKF--QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred cchhhcee--eeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 44455432 478999999999999854 454 468887764332 235688999999999 8999999999999999
Q ss_pred eEEEEEeecCCCChhHhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee
Q 006903 415 EKLLVYEYQPNGSLFNLLHGSE-------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF 481 (626)
Q Consensus 415 ~~~lv~Ey~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl 481 (626)
..++||||+++|+|.++++... ....+++..++.++.|++.||+||| ++||+||||||+|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH----~~gi~H~dlkp~Nili 157 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNILV 157 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH----hCCccccccchheEEe
Confidence 9999999999999999996432 1235889999999999999999999 6899999999999999
Q ss_pred CCCCCeEEeeccCccccCCCc--cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHH
Q 006903 482 NNNMEPCISEYGLIVTENHDQ--SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSV 558 (626)
Q Consensus 482 ~~~~~~kl~DFGl~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~ 558 (626)
++++.+||+|||++....... .....+..|++||......++.++|||||||++|||+| |..||... +..+.....
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~~~~~~~ 236 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKL 236 (303)
T ss_pred cCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccC-ChHHHHHHH
Confidence 999999999999986432111 11122456899998877778999999999999999998 99888532 222222222
Q ss_pred hhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 559 VREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 559 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
.. ..... ........+.+++.+||+.+|++||++.++++.|+++.....
T Consensus 237 ~~-~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 237 PQ-GYRLE----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred hc-CCcCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 11 11110 011122357889999999999999999999999998876544
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=324.59 Aligned_cols=241 Identities=23% Similarity=0.342 Sum_probs=199.2
Q ss_pred ccchhhhhcccccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccC-CCCCccccceEEEeC
Q 006903 340 KLKFEDLLRAPAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSK 413 (626)
Q Consensus 340 ~~~~~~l~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~ 413 (626)
+++++++. ...+||+|.||+|+.+.+ .+++.+|||.+++... ..+....|-+++... +||.++.++..|.++
T Consensus 364 ~~~l~~F~--~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~ 441 (694)
T KOG0694|consen 364 PLTLDDFR--LLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK 441 (694)
T ss_pred cccccceE--EEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC
Confidence 45555553 247899999999999995 4688999999998763 234566777766555 599999999999999
Q ss_pred CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeecc
Q 006903 414 QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYG 493 (626)
Q Consensus 414 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 493 (626)
+..|.||||+.||++..+.+ ...|+......+|.+|+.||+||| ++|||+||||-+|||||.+|++||+|||
T Consensus 442 ~~l~fvmey~~Ggdm~~~~~----~~~F~e~rarfyaAev~l~L~fLH----~~~IIYRDlKLdNiLLD~eGh~kiADFG 513 (694)
T KOG0694|consen 442 EHLFFVMEYVAGGDLMHHIH----TDVFSEPRARFYAAEVVLGLQFLH----ENGIIYRDLKLDNLLLDTEGHVKIADFG 513 (694)
T ss_pred CeEEEEEEecCCCcEEEEEe----cccccHHHHHHHHHHHHHHHHHHH----hcCceeeecchhheEEcccCcEEecccc
Confidence 99999999999999655553 357999999999999999999999 7899999999999999999999999999
Q ss_pred Ccccc---CCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 494 LIVTE---NHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 494 l~~~~---~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
+++.. ....+..+||+.|++||++.+..|+..+|+|||||+||||+.|..||.+ .+-.+.+..+..++...
T Consensus 514 lcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g-ddEee~FdsI~~d~~~y----- 587 (694)
T KOG0694|consen 514 LCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG-DDEEEVFDSIVNDEVRY----- 587 (694)
T ss_pred cccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHhcCCCCC-----
Confidence 99763 3345667899999999999999999999999999999999999999973 34455666666554322
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCH
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
+.....+..+++.+.+..+|++|--+
T Consensus 588 -------P~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 588 -------PRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -------CCcccHHHHHHHHHHhccCcccccCC
Confidence 22233457788899999999999765
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=309.58 Aligned_cols=246 Identities=21% Similarity=0.327 Sum_probs=192.8
Q ss_pred ccccccCCCcceEEEEe-----CCCcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-----DDGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .++..||+|.+...... ..++.+|++++++++||||+++++++...+..++||||+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 89 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYL 89 (283)
T ss_pred eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcC
Confidence 37899999999999973 34678999999754322 256889999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEE
Q 006903 424 PNGSLFNLLHGSEN--------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCI 489 (626)
Q Consensus 424 ~~g~L~~~l~~~~~--------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl 489 (626)
++|+|.+++..... ...+++...+.++.+++.||.||| +++|+||||||+|||+++++.+|+
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i~H~dlkp~nili~~~~~~kl 165 (283)
T cd05090 90 NQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS----SHFFVHKDLAARNILIGEQLHVKI 165 (283)
T ss_pred CCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hcCeehhccccceEEEcCCCcEEe
Confidence 99999999853211 235789999999999999999999 679999999999999999999999
Q ss_pred eeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccc
Q 006903 490 SEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEW 563 (626)
Q Consensus 490 ~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 563 (626)
+|||+++...... ....++..|++||......++.++|||||||++|||++ |..||... .............
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~- 243 (283)
T cd05090 166 SDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF-SNQEVIEMVRKRQ- 243 (283)
T ss_pred ccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHcCC-
Confidence 9999986532211 11223456899998877778999999999999999999 88887643 2222222222111
Q ss_pred ccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 564 TVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 564 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
... .+......+.+++.+||+.||++||++.+|.+.|+.
T Consensus 244 ~~~----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 244 LLP----------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred cCC----------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 110 111223457889999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=306.60 Aligned_cols=250 Identities=18% Similarity=0.282 Sum_probs=199.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+++.||||.++.... ....+.+|+++++.++||||+++++++...+..++||||+++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 86 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADA 86 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCC
Confidence 36799999999999984 5789999998764321 224688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--
Q 006903 426 GSLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-- 502 (626)
Q Consensus 426 g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-- 502 (626)
|+|.+++.... ....++......++.+++.||.||| +++|+||||||+||+++.++.++++|||++.......
T Consensus 87 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~ 162 (267)
T cd08228 87 GDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred CcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHH
Confidence 99999885322 2345788999999999999999999 6799999999999999999999999999976543221
Q ss_pred -cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc-chhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 503 -SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF-NLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
....++..|++||.......+.++||||||+++|||+||+.|+.... +...+........... .....
T Consensus 163 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 232 (267)
T cd08228 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPP----------LPTEH 232 (267)
T ss_pred HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCC----------CChhh
Confidence 12345677999998877778899999999999999999999986432 2233333222111110 01122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
....+.+++.+||+.+|++||++.+|++.+++++
T Consensus 233 ~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 233 YSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred cCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 3345889999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=309.26 Aligned_cols=246 Identities=17% Similarity=0.290 Sum_probs=196.2
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... +++.||||.++..... .+.+.+|++++++++||||+++++++......++||||
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 89 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEY 89 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEec
Confidence 378999999999999853 3578999999765433 46799999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEee
Q 006903 423 QPNGSLFNLLHGSE-----------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISE 491 (626)
Q Consensus 423 ~~~g~L~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~D 491 (626)
+++|+|.++++... ....+++..+..++.+++.|+.||| +++|+||||||+||+++.++.+|++|
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH----~~~i~h~dlkp~nili~~~~~~kl~d 165 (280)
T cd05049 90 MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA----SQHFVHRDLATRNCLVGYDLVVKIGD 165 (280)
T ss_pred CCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh----hCCeeccccccceEEEcCCCeEEECC
Confidence 99999999996422 1245789999999999999999999 67999999999999999999999999
Q ss_pred ccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccc
Q 006903 492 YGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTV 565 (626)
Q Consensus 492 FGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 565 (626)
||++....... .....+..|++||......++.++|||||||++|||++ |+.||.... ..+......... ..
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~-~~~~~~~~~~~~-~~ 243 (280)
T cd05049 166 FGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS-NEEVIECITQGR-LL 243 (280)
T ss_pred cccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCC-cC
Confidence 99986432211 11223567999999888888999999999999999999 999986432 222222222111 10
Q ss_pred ccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 566 EVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 566 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
. ........+.+++.+||+.||++||++.||++.|++
T Consensus 244 ~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 244 Q----------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred C----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 0 011223458899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=305.16 Aligned_cols=241 Identities=18% Similarity=0.261 Sum_probs=191.3
Q ss_pred ccccCCCcceEEEEe---CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 353 LLGRGKHGSLYRVVL---DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.||+|+||.||+|.+ .++..+|+|+++..... .+++.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999964 35789999998754432 357889999999999999999999875 45678999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc---
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS--- 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~--- 503 (626)
+|.+++.. ...+++..+..++.|++.||.|+| +++|+||||||+||++++++.+||+|||++........
T Consensus 81 ~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQK---NKHVTEKNITELVHQVSMGMKYLE----ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999953 246899999999999999999999 67999999999999999999999999999865432221
Q ss_pred ---ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 504 ---FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 504 ---~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
...++..|++||......++.++|||||||++|||+| |+.||... ...++...+.... ... .+.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-~~~~~~~~i~~~~-~~~----------~~~ 221 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGM-KGNEVTQMIESGE-RME----------CPQ 221 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHCCC-CCC----------CCC
Confidence 1122357899998877778889999999999999998 89898643 2233333332211 111 111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.....+.+++.+||+.||++||++.+|++.|++.
T Consensus 222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 222 RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 2234578899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=308.15 Aligned_cols=249 Identities=19% Similarity=0.262 Sum_probs=192.1
Q ss_pred ccccccCCCcceEEEEe-CCCc----EEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGL----MLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.+ .+++ .+|+|.+..... ...++..|+..+++++||||+++++++. ....++++||+
T Consensus 12 ~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~ 90 (279)
T cd05111 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLS 90 (279)
T ss_pred ccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeC
Confidence 37899999999999985 3454 478888764332 2356778888999999999999999875 45578999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++.. ....++|..+..++.|++.||.||| +++++||||||+|||+++++.+|++|||+++......
T Consensus 91 ~~gsL~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH----~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T cd05111 91 PLGSLLDHVRQ--HRDSLDPQRLLNWCVQIAKGMYYLE----EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK 164 (279)
T ss_pred CCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH----HCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence 99999999964 2356899999999999999999999 6789999999999999999999999999986432211
Q ss_pred ----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 ----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 ----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|++||......++.++|||||||++||++| |+.||.... .... ........... .+
T Consensus 165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-~~~~-~~~~~~~~~~~--~~------- 233 (279)
T cd05111 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR-PHEV-PDLLEKGERLA--QP------- 233 (279)
T ss_pred ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC-HHHH-HHHHHCCCcCC--CC-------
Confidence 12234557899998877788999999999999999998 988886432 1111 11111111110 00
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
..+...+.+++.+||..+|++|||+.|+++.|..+..+..
T Consensus 234 -~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~ 273 (279)
T cd05111 234 -QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPP 273 (279)
T ss_pred -CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCc
Confidence 1122346788899999999999999999999998876543
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=334.55 Aligned_cols=242 Identities=17% Similarity=0.185 Sum_probs=194.3
Q ss_pred ccccccCCCcceEEEEe-CC-CcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DD-GLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~-g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .+ ++.||+|.+..... ....+.+|+++++.++|||||++++++..++..++||||+++|+
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~ 151 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGD 151 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCC
Confidence 47899999999999984 34 67889997754432 23457889999999999999999999999999999999999999
Q ss_pred hhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-----
Q 006903 428 LFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD----- 501 (626)
Q Consensus 428 L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~----- 501 (626)
|.++++.. ....++++.....++.|++.||.|+| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 152 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH----~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~ 227 (478)
T PTZ00267 152 LNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH----SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDV 227 (478)
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccccc
Confidence 99988532 23346889999999999999999999 679999999999999999999999999998754322
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....++..|++||......++.++|||||||++|||+||+.||... +..+............ .+...
T Consensus 228 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~-~~~~~~~~~~~~~~~~-----------~~~~~ 295 (478)
T PTZ00267 228 ASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP-SQREIMQQVLYGKYDP-----------FPCPV 295 (478)
T ss_pred ccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCC-----------CCccC
Confidence 12345788899999988888899999999999999999999998643 3333333333222110 01112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++||++++++.
T Consensus 296 s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 296 SSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 345888999999999999999999864
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=301.93 Aligned_cols=256 Identities=16% Similarity=0.237 Sum_probs=197.7
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCC-ccccceEEEeCC------eEEEEE
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPN-VLPPLAYYCSKQ------EKLLVY 420 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~n-Iv~l~g~~~~~~------~~~lv~ 420 (626)
+.||+|+||+||+|+ ..+|+.||+|+++.... ......+|+.++++++|+| ||++++++.+.+ ..++|+
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvf 96 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVF 96 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEE
Confidence 669999999999999 66799999999986543 3456789999999999999 999999998877 789999
Q ss_pred eecCCCChhHhhcCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 421 EYQPNGSLFNLLHGSENG-QSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
||+.. +|.+++...... ..++-..+..++.|+++||+||| +++|+||||||+|||++++|.+||+|||+|+...
T Consensus 97 e~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H----~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 97 EFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH----SHGILHRDLKPQNLLISSSGVLKLADFGLARAFS 171 (323)
T ss_pred Eeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH----hCCeecccCCcceEEECCCCcEeeeccchHHHhc
Confidence 99975 999999754322 45677889999999999999999 7899999999999999999999999999997644
Q ss_pred CC---ccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh-------cccccccc
Q 006903 500 HD---QSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR-------EEWTVEVF 568 (626)
Q Consensus 500 ~~---~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~ 568 (626)
.. -+....|.+|.|||+..+. .|++..||||+||++.||++++..|.+..+..+..+ +.+ ..|.....
T Consensus 172 ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~-If~~lGtP~e~~Wp~v~~ 250 (323)
T KOG0594|consen 172 IPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFR-IFRLLGTPNEKDWPGVSS 250 (323)
T ss_pred CCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHH-HHHHcCCCCccCCCCccc
Confidence 22 2233567789999986554 789999999999999999999988886655444322 221 11111100
Q ss_pred --cHH--H---H-hhhccH---HHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhh
Q 006903 569 --DEV--L---I-AEAASE---ERMLKLLQVALRCINQSPNERPSMNQVAVM--INNI 613 (626)
Q Consensus 569 --d~~--~---~-~~~~~~---~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i 613 (626)
+.. . . ...... .......+++.+|++++|.+|.|++.++.+ +..+
T Consensus 251 ~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 251 LPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred cccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 000 0 0 000001 111357889999999999999999999886 5554
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=305.62 Aligned_cols=241 Identities=16% Similarity=0.251 Sum_probs=190.1
Q ss_pred cccCCCcceEEEEeC---CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 354 LGRGKHGSLYRVVLD---DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 354 lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|++++++++||||+++++++. .+..++||||+++|+|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence 899999999999753 356799999876532 2356899999999999999999999875 4578999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc-----
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS----- 503 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~----- 503 (626)
.+++... ...+++..+++++.|++.||.||| +++++||||||+|||++.++.+|++|||++........
T Consensus 82 ~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 82 NKFLSGK--KDEITVSNVVELMHQVSMGMKYLE----GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH----hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 9999632 346899999999999999999999 67999999999999999999999999999864322211
Q ss_pred -ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 504 -FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 504 -~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....+..|++||......++.++|||||||++||+++ |+.||.... ..++...+.... ... .+..+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~-~~~----------~~~~~ 223 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK-GPEVMSFIEQGK-RLD----------CPAEC 223 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC-HHHHHHHHHCCC-CCC----------CCCCC
Confidence 1112356899998877778899999999999999996 999986432 222222222111 110 11122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
...+.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 224 ~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 224 PPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 34688899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=310.89 Aligned_cols=255 Identities=18% Similarity=0.268 Sum_probs=193.1
Q ss_pred ccccccCCCcceEEEEe-----CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-----DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~E 421 (626)
.+.||+|+||+||++.+ .++..||+|.++.... ..+.+.+|++++++++||||+++++++... ...++|||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (283)
T cd05080 9 IRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIME 88 (283)
T ss_pred ceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEec
Confidence 36899999999988653 4578999999876432 346788999999999999999999987654 35789999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++.. ..+++..+..++.|++.||.||| +++|+||||||+||++++++.+|++|||+++.....
T Consensus 89 ~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 89 YVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLH----SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred CCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 9999999999953 35899999999999999999999 679999999999999999999999999998653322
Q ss_pred c------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc----ccccccHH
Q 006903 502 Q------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW----TVEVFDEV 571 (626)
Q Consensus 502 ~------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~----~~~~~d~~ 571 (626)
. ....++..|++||......++.++||||||+++|||+||+.|+.................. ..+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T cd05080 161 HEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERG 240 (283)
T ss_pred chhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcC
Confidence 1 1123445688999887777899999999999999999999987532211100000000000 00000000
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
. ....+...+..+.+++.+||+.+|++|||++++++.|+++.
T Consensus 241 ~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 241 M-RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred C-CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0 00112223457899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=319.51 Aligned_cols=250 Identities=20% Similarity=0.308 Sum_probs=193.7
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCCCC--HHHHHHHHHHhccC-CCCCccccceEEEeC-CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSIS--SEDFKNRMQKIDHV-KHPNVLPPLAYYCSK-QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~-~~~~lv~ 420 (626)
.+.||+|+||.||+|.. .+++.||+|+++..... .+.+.+|++++.++ +|+||++++++|... ...+++|
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ 91 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEE
Confidence 47899999999999963 23578999998754322 24677899999999 899999999988654 5678999
Q ss_pred eecCCCChhHhhcCCCC----------------------------------------------------------CCCCC
Q 006903 421 EYQPNGSLFNLLHGSEN----------------------------------------------------------GQSFD 442 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~----------------------------------------------------------~~~l~ 442 (626)
||+++|+|.+++..... ...++
T Consensus 92 ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (337)
T cd05054 92 EYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLT 171 (337)
T ss_pred ecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCC
Confidence 99999999999853211 12689
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-----cccccccccchhhcc
Q 006903 443 WGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDIS 517 (626)
Q Consensus 443 ~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~ 517 (626)
|..+..++.|++.||+||| +++|+||||||+|||+++++.+||+|||++....... ....++..|++||..
T Consensus 172 ~~~~~~~~~qi~~aL~~lH----~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 247 (337)
T cd05054 172 LEDLISYSFQVARGMEFLA----SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESI 247 (337)
T ss_pred HHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHh
Confidence 9999999999999999999 6799999999999999999999999999987532221 112335579999998
Q ss_pred ccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCC
Q 006903 518 NQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQS 596 (626)
Q Consensus 518 ~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~d 596 (626)
....++.++|||||||++|||++ |+.||.......... .......... .+......+.+++.+||+.+
T Consensus 248 ~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~l~~~cl~~~ 316 (337)
T cd05054 248 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFC-RRLKEGTRMR----------APEYATPEIYSIMLDCWHNN 316 (337)
T ss_pred cCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHH-HHHhccCCCC----------CCccCCHHHHHHHHHHccCC
Confidence 88889999999999999999998 998886422111111 1111111110 11122345889999999999
Q ss_pred CCCCCCHHHHHHHHHhhhh
Q 006903 597 PNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 597 P~~RPs~~ev~~~L~~i~~ 615 (626)
|++||++.|++++|+.+..
T Consensus 317 p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 317 PEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred hhhCcCHHHHHHHHHHHHh
Confidence 9999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=306.30 Aligned_cols=245 Identities=21% Similarity=0.334 Sum_probs=195.9
Q ss_pred ccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|... +...||||.++.... ...+|.+|+.++++++||||+++++++...+..++||||++
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 88 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYME 88 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCC
Confidence 478999999999999864 246899999875442 23578899999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc-
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS- 503 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~- 503 (626)
+|+|.+++... ...+++..+.+++.+++.||+||| +++|+||||||+||++++++.++++|||++........
T Consensus 89 ~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh----~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd05033 89 NGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLS----EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT 162 (266)
T ss_pred CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCCEEECccchhhcccccccc
Confidence 99999999642 247899999999999999999999 68999999999999999999999999999875431111
Q ss_pred ----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 504 ----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 504 ----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....+..|++||......++.++||||||+++|||++ |..||.... ..+........ +... ..
T Consensus 163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~-~~~~~~~~~~~-~~~~----------~~ 230 (266)
T cd05033 163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS-NQDVIKAVEDG-YRLP----------PP 230 (266)
T ss_pred eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHHcC-CCCC----------CC
Confidence 1123456899998887788999999999999999998 988886432 22222222111 1110 01
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
......+.+++.+||+.+|++||+++|+++.|+++
T Consensus 231 ~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 231 MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 12234588999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=310.66 Aligned_cols=251 Identities=18% Similarity=0.308 Sum_probs=198.9
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||++.. .++..+|+|.+..... ..+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 10 ~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 89 (288)
T cd05093 10 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 89 (288)
T ss_pred ccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcC
Confidence 47899999999999974 2356799999876442 3457899999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeecc
Q 006903 424 PNGSLFNLLHGSE----------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYG 493 (626)
Q Consensus 424 ~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 493 (626)
++++|.+++.... ....+++..++.++.|++.||+||| +++|+||||||+||++++++.+||+|||
T Consensus 90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg 165 (288)
T cd05093 90 KHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA----SQHFVHRDLATRNCLVGENLLVKIGDFG 165 (288)
T ss_pred CCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccCcceEEEccCCcEEeccCC
Confidence 9999999996322 1235899999999999999999999 6799999999999999999999999999
Q ss_pred CccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccc
Q 006903 494 LIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEV 567 (626)
Q Consensus 494 l~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 567 (626)
++....... ....++..|++||......++.++|||||||++|||+| |+.||... ...+....+...... .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~-~~~~~~~~i~~~~~~-~- 242 (288)
T cd05093 166 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL-SNNEVIECITQGRVL-Q- 242 (288)
T ss_pred ccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCCcC-C-
Confidence 986432221 11223457899999887788999999999999999999 88887643 222222332222111 0
Q ss_pred ccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 568 FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 568 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
........+.+++.+||+.||.+|||+.|+.+.|+++....
T Consensus 243 ---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 243 ---------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred ---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 00112335889999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=304.96 Aligned_cols=246 Identities=21% Similarity=0.374 Sum_probs=200.3
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|...++..+|+|.+..... ..+++.+|+++++.++||||+++++++...+..++||||+++|+|.
T Consensus 11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLL 90 (261)
T ss_pred hhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHH
Confidence 478999999999999987799999999986654 4578999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---cccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---SFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~~~~ 506 (626)
++++.. .+..+++..+.+++.+++.||.||| +++|+||||||+||++++++.+||+|||++....... ....
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 165 (261)
T cd05148 91 AFLRSP-EGQVLPVASLIDMACQVAEGMAYLE----EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK 165 (261)
T ss_pred HHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCC
Confidence 999753 3456899999999999999999999 6799999999999999999999999999986543221 1112
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.+..|++||......++.++||||||+++|||++ |+.||... +..+......... ... ........+
T Consensus 166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~-~~~~~~~~~~~~~-~~~----------~~~~~~~~~ 233 (261)
T cd05148 166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGM-NNHEVYDQITAGY-RMP----------CPAKCPQEI 233 (261)
T ss_pred CceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcC-CHHHHHHHHHhCC-cCC----------CCCCCCHHH
Confidence 3456889998877788899999999999999999 78888643 2222333222111 100 112233458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.+++.+||+.||++|||+.++++.|+++
T Consensus 234 ~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 234 YKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 8999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-37 Score=319.05 Aligned_cols=232 Identities=20% Similarity=0.288 Sum_probs=187.1
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
++||+|+||.||+|+. .+++.||||+++... ...+.+..|+.++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999985 468999999987532 2234567888888766 699999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|.+++.. ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++... ...
T Consensus 81 g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH----~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~ 153 (320)
T cd05590 81 GDLMFHIQK---SRRFDEARARFYAAEITSALMFLH----DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153 (320)
T ss_pred chHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcc
Confidence 999999853 346889999999999999999999 6799999999999999999999999999976422 122
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||+||+.||... +..+....+...... .+....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~-~~~~~~~~i~~~~~~------------~~~~~~ 220 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE-NEDDLFEAILNDEVV------------YPTWLS 220 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC-CHHHHHHHHhcCCCC------------CCCCCC
Confidence 3345788999999988888899999999999999999999999743 233333333322111 001122
Q ss_pred HHHHHHHhhccCCCCCCCCCH
Q 006903 583 LKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
..+.+++.+|++.||++||++
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 221 QDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHHHcccCHHHCCCC
Confidence 347889999999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=318.82 Aligned_cols=251 Identities=17% Similarity=0.262 Sum_probs=186.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCC-----eEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ-----EKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~-----~~~lv~E 421 (626)
.+.||+|+||.||+|.. .+++.||||+++... .....+.+|++++++++||||+++++++...+ ..++|||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e 84 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFE 84 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEe
Confidence 47899999999999984 578999999987532 22346889999999999999999999876432 4799999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+. ++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~~-~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 85 LME-SDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIH----TANVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred cCC-CCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 995 689998853 346899999999999999999999 679999999999999999999999999998643211
Q ss_pred c------cccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--HHHHhhccc--------
Q 006903 502 Q------SFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW--VHSVVREEW-------- 563 (626)
Q Consensus 502 ~------~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~-------- 563 (626)
. ....++..|++||.... ..++.++|||||||++|||+||+.||......... +........
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 1 22357788999998754 56788999999999999999999998643321111 111100000
Q ss_pred ---ccccccHHHHhh-----hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 564 ---TVEVFDEVLIAE-----AASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 564 ---~~~~~d~~~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+......... ...+.....+.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000000000 0000122357889999999999999999999863
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=321.65 Aligned_cols=246 Identities=20% Similarity=0.282 Sum_probs=188.4
Q ss_pred chhhhhcccccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEE
Q 006903 342 KFEDLLRAPAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 342 ~~~~l~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~l 418 (626)
.++++.. .+.||+|+||.||+|.. .+++.||||.+..... ..+.+.+|+++++.++|+||+++++++...+..++
T Consensus 72 ~~~~~~~--~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 149 (353)
T PLN00034 72 SLSELER--VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQV 149 (353)
T ss_pred CHHHHhh--hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEE
Confidence 3444432 47899999999999985 4689999999865432 23578899999999999999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+++|+|.+.. ..++..+..++.|++.||.||| +++|+||||||+|||+++++.+||+|||+++..
T Consensus 150 v~e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~ 218 (353)
T PLN00034 150 LLEFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLH----RRHIVHRDIKPSNLLINSAKNVKIADFGVSRIL 218 (353)
T ss_pred EEecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEcCCCCEEEcccccceec
Confidence 99999999986543 3456778899999999999999 679999999999999999999999999998654
Q ss_pred CCC---ccccccccccchhhcccc-----CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 499 NHD---QSFLAQTSSLKINDISNQ-----MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 499 ~~~---~~~~~~~~~~~~pe~~~~-----~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
... .....++..|++||.... ...+.++|||||||++|||++|+.||.... ..+|............
T Consensus 219 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~---- 293 (353)
T PLN00034 219 AQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR-QGDWASLMCAICMSQP---- 293 (353)
T ss_pred ccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCC-CccHHHHHHHHhccCC----
Confidence 322 123457888999997632 234568999999999999999999986321 1122111110000000
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..........+.+++.+||+.||++|||+.|+++.
T Consensus 294 ----~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 294 ----PEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ----CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111233458899999999999999999999875
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=303.71 Aligned_cols=244 Identities=23% Similarity=0.369 Sum_probs=195.5
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|....+..+|+|.+.......+.+.+|++++++++|||++++++++. .+..+++|||+++|+|.+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~ 89 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLD 89 (260)
T ss_pred eeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHH
Confidence 3679999999999999877778999998766666678999999999999999999998774 566899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
+++.. ....++|..+..++.+++.||+||| +.+|+||||||+||++++++.++|+|||++....... ....
T Consensus 90 ~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 164 (260)
T cd05069 90 FLKEG-DGKYLKLPQLVDMAAQIADGMAYIE----RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAK 164 (260)
T ss_pred HHhhC-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCc
Confidence 99643 2345899999999999999999999 6799999999999999999999999999986532211 1122
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||.......+.++|||||||++|||+| |+.||....+. +........ ... ..+...+..+
T Consensus 165 ~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~~~~~-~~~----------~~~~~~~~~~ 232 (260)
T cd05069 165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR-EVLEQVERG-YRM----------PCPQGCPESL 232 (260)
T ss_pred cchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcC-CCC----------CCCcccCHHH
Confidence 3456899998877778999999999999999999 88888643322 222222111 110 0112234468
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
.+++.+||+.||++||++++|.+.|++
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 233 HELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 889999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=304.26 Aligned_cols=244 Identities=22% Similarity=0.387 Sum_probs=197.9
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...+++.||+|.+.......+++.+|+.++++++||||+++++++ ..+..+++|||+++|+|.+
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~ 89 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVD 89 (260)
T ss_pred eeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCCCCHHH
Confidence 478999999999999988899999999987777778899999999999999999999976 4567899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
++... ....+++..+..++.+++.||+||| +.+++||||||+||++++++.++++|||++....... ....
T Consensus 90 ~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH----~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 164 (260)
T cd05067 90 FLKTP-EGIKLTINKLIDMAAQIAEGMAFIE----RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAK 164 (260)
T ss_pred HHHhc-CCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCc
Confidence 98643 2457899999999999999999999 6799999999999999999999999999986543211 1122
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++||+++ |+.||.... ..+........ .... ........+
T Consensus 165 ~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~-~~~~----------~~~~~~~~~ 232 (260)
T cd05067 165 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT-NPEVIQNLERG-YRMP----------RPDNCPEEL 232 (260)
T ss_pred ccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC-hHHHHHHHHcC-CCCC----------CCCCCCHHH
Confidence 3456899998877778899999999999999999 999986432 22222222111 1111 011123458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
.+++.+||+.+|++||+++++...|+.
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 233 YELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=317.39 Aligned_cols=238 Identities=18% Similarity=0.264 Sum_probs=190.2
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
++||+|+||.||+|+. .+++.||+|.++... ...+.+..|.+++..+ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 3699999999999985 458899999987532 2234567888888765 799999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~ 502 (626)
|+|..++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||++..... ..
T Consensus 81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (321)
T cd05591 81 GDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLH----RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 153 (321)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccc
Confidence 999999853 346889999999999999999999 67999999999999999999999999999864221 12
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||+||+.||... +..+....+....... +....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~~ 220 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEAD-NEDDLFESILHDDVLY------------PVWLS 220 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCCC------------CCCCC
Confidence 2345788899999988888899999999999999999999999743 2333333333322110 00112
Q ss_pred HHHHHHHhhccCCCCCCCC-------CHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERP-------SMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RP-------s~~ev~~~ 609 (626)
..+.+++.+||+.||++|| ++.++++.
T Consensus 221 ~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 221 KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 3477889999999999999 77777643
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=315.63 Aligned_cols=237 Identities=19% Similarity=0.269 Sum_probs=188.1
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhcc-CCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDH-VKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~-l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|.. .+++.||||.++... ...+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 3699999999999995 458899999987542 223456677777765 5899999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|.+++.. ...+++.....++.|++.||.||| +++|+||||||+|||++.++.+||+|||++.... ...
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH----~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05619 81 GDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLH----SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKT 153 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCce
Confidence 999999953 346889999999999999999999 6799999999999999999999999999986421 122
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||++|+.||... +..+..+.+...... .+....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~-~~~~~~~~i~~~~~~------------~~~~~~ 220 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGH-DEEELFQSIRMDNPC------------YPRWLT 220 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCC------------CCccCC
Confidence 2345788899999988888899999999999999999999998643 223333322211110 011122
Q ss_pred HHHHHHHhhccCCCCCCCCCHH-HHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMN-QVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~-ev~~ 608 (626)
..+.+++.+||+.||++||++. ++.+
T Consensus 221 ~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 221 REAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred HHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 3477889999999999999997 5543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-38 Score=309.23 Aligned_cols=258 Identities=18% Similarity=0.268 Sum_probs=189.1
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCC-----eEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ-----EKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~-----~~~lv~Ey~ 423 (626)
..+++|.|+||.||+|.. .+++.||||+.-.... --.+|+++|++++|||||+++-+|.... ...+|||||
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 348999999999999995 4579999998854332 2347999999999999999999887532 235899999
Q ss_pred CCCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC-CCeEEeeccCccccCCC
Q 006903 424 PNGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN-MEPCISEYGLIVTENHD 501 (626)
Q Consensus 424 ~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGl~~~~~~~ 501 (626)
|. +|.++++.. .....++...+.-+..|+.+||+||| +.+|+||||||+|+|+|.+ +.+||||||.|+.....
T Consensus 105 P~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh----~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 105 PE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH----SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred hH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH----hcCcccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 97 999998631 22356777778889999999999999 6799999999999999976 89999999999764322
Q ss_pred --ccccccccccchhhcc-ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHH--hhccc----------ccc
Q 006903 502 --QSFLAQTSSLKINDIS-NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV--VREEW----------TVE 566 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~-~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~--~~~~~----------~~~ 566 (626)
...+.-+.+|+|||.+ +...|+.+.||||.|||+.||+-|++.|.+.....+.+..+ ..... ..+
T Consensus 180 epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~ 259 (364)
T KOG0658|consen 180 EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTE 259 (364)
T ss_pred CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccccc
Confidence 2223346789999975 45678999999999999999999999887644333322211 11100 001
Q ss_pred cccHHHHhhh----ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhh
Q 006903 567 VFDEVLIAEA----ASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIKE 615 (626)
Q Consensus 567 ~~d~~~~~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~~ 615 (626)
...+.+.... .......+.++++.++++++|.+|.++.|++. .+.+++.
T Consensus 260 ~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 260 FKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred ccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 1111111111 12233456889999999999999999999875 3444443
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=306.67 Aligned_cols=247 Identities=23% Similarity=0.397 Sum_probs=193.0
Q ss_pred cccccCCCcceEEEEeC-CCc--EEEEEEcCCCC--CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVLD-DGL--MLAVKRLRDWS--ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~-~g~--~vAvK~l~~~~--~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
++||+|+||.||+|... ++. .+|+|.++... ...+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 46999999999999964 343 57889887533 2335788999999999 899999999999999999999999999
Q ss_pred CChhHhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeec
Q 006903 426 GSLFNLLHGSE-------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEY 492 (626)
Q Consensus 426 g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 492 (626)
|+|.++++... ....+++..+..++.|++.||+||| +++++||||||+||++++++.+|++||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH----~~~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccccceEEEcCCCeEEECCC
Confidence 99999996422 1235889999999999999999999 679999999999999999999999999
Q ss_pred cCccccCCCc--cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 493 GLIVTENHDQ--SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 493 Gl~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
|++....... .....+..|++||......++.++|||||||++|||+| |+.||... +..+........ ...+.
T Consensus 157 gl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~-~~~~~~~~~~~~-~~~~~-- 232 (270)
T cd05047 157 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQG-YRLEK-- 232 (270)
T ss_pred CCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcccc-CHHHHHHHHhCC-CCCCC--
Confidence 9975322111 11122446899998877788999999999999999997 88888532 222322222211 11110
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
.......+.+++.+||+.+|.+|||+.++++.|+++.
T Consensus 233 --------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 233 --------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred --------CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1112235789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-37 Score=306.54 Aligned_cols=254 Identities=23% Similarity=0.344 Sum_probs=195.5
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhc--cCCCCCccccceEEEeC----CeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKID--HVKHPNVLPPLAYYCSK----QEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~--~l~H~nIv~l~g~~~~~----~~~~lv~Ey~~ 424 (626)
.+.||+|.||.||+|.++ |+.||||++... ++..+.+|.++.+ .|+|+||+.+++.-..+ .++|||+||.+
T Consensus 216 ~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr--dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe 292 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR--DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHE 292 (513)
T ss_pred EEEecCccccceeecccc-CCceEEEEeccc--chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeeccc
Confidence 478999999999999996 889999999653 3455666666665 56999999999875543 36899999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcc----CCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR----EDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~----~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
.|+|+|||.. ..++-...++++.-+|.||++||.+.. ++.|.|||||+.|||+.+++...|+|+|||....+
T Consensus 293 ~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~ 368 (513)
T KOG2052|consen 293 HGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 368 (513)
T ss_pred CCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecc
Confidence 9999999963 568889999999999999999996543 56799999999999999999999999999865433
Q ss_pred C-------ccccccccccchhhccccCCC------CCcchhHHHHHHHHHHHcCC----------CCCCCC---cchhHH
Q 006903 501 D-------QSFLAQTSSLKINDISNQMCS------TIKADVYGFGVILLELLTGK----------LVQNNG---FNLATW 554 (626)
Q Consensus 501 ~-------~~~~~~~~~~~~pe~~~~~~~------~~k~DVwSfGvvl~elltg~----------~p~~~~---~~~~~~ 554 (626)
+ .....||..|||||++..... -..+||||||.|+||++-+- .||++- ....+.
T Consensus 369 ~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~ee 448 (513)
T KOG2052|consen 369 DTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEE 448 (513)
T ss_pred cCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHH
Confidence 2 234568899999998764322 23699999999999997642 455421 112222
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
++.++..+. +.+.++....+.+.+..+.++|..||..+|..|-|+-.|.+.|.++.+
T Consensus 449 MrkVVCv~~----~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 449 MRKVVCVQK----LRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred Hhcceeecc----cCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 222222221 222223333556788889999999999999999999999999998864
|
|
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=311.61 Aligned_cols=252 Identities=23% Similarity=0.399 Sum_probs=196.2
Q ss_pred ccccccCCCcceEEEEeC-CC--cEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DG--LMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g--~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.++||+|+||.||+|... ++ ..+|+|.++.... ..+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 86 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAP 86 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecC
Confidence 468999999999999864 34 3578998874322 335788999999999 79999999999999999999999999
Q ss_pred CCChhHhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEee
Q 006903 425 NGSLFNLLHGSE-------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISE 491 (626)
Q Consensus 425 ~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~D 491 (626)
+|+|.++++... ....+++..+..++.|++.||+||| +++|+||||||+|||+++++.+||+|
T Consensus 87 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH----~~~ivH~dlkp~Nill~~~~~~kl~d 162 (297)
T cd05089 87 YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS----EKQFIHRDLAARNVLVGENLASKIAD 162 (297)
T ss_pred CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCcCCcceEEECCCCeEEECC
Confidence 999999996422 1135889999999999999999999 67999999999999999999999999
Q ss_pred ccCccccCCCc--cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 492 YGLIVTENHDQ--SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 492 FGl~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
||++....... .....+..|++||......++.++|||||||++|||+| |+.||... ...+......... ...
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~-~~~~~~~~~~~~~-~~~-- 238 (297)
T cd05089 163 FGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGY-RME-- 238 (297)
T ss_pred cCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHhcCC-CCC--
Confidence 99976432211 11122345899998877778999999999999999998 99998643 2222222222111 100
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
.+......+.+++.+||+.+|.+||+++++++.|+++.....
T Consensus 239 --------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 239 --------KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred --------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 011123457899999999999999999999999998876543
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=303.31 Aligned_cols=244 Identities=20% Similarity=0.328 Sum_probs=195.4
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEE-eCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC-SKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~-~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||++... |..||+|.++.. ...+.+.+|+.++++++|+|++++++++. ..+..+++|||+++|+|.
T Consensus 11 ~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~ 88 (256)
T cd05082 11 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88 (256)
T ss_pred eeeecccCCCeEEEEEEc-CCcEEEEEeCCC-chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHH
Confidence 478999999999999865 788999998653 34567899999999999999999999765 445689999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTS 509 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~ 509 (626)
++++.. ....+++..++.++.+++.||+||| +++|+||||||+||++++++.+|++|||++............+.
T Consensus 89 ~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 163 (256)
T cd05082 89 DYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLE----ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163 (256)
T ss_pred HHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccce
Confidence 999643 2345889999999999999999999 67999999999999999999999999999875433333333455
Q ss_pred ccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHH
Q 006903 510 SLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQV 588 (626)
Q Consensus 510 ~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 588 (626)
.|++||......++.++|||||||++|||++ |+.|+... ...+....+... .... ..+.....+.++
T Consensus 164 ~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-~~~~~~~~~~~~-~~~~----------~~~~~~~~~~~l 231 (256)
T cd05082 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKG-YKMD----------APDGCPPVVYDV 231 (256)
T ss_pred eecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHhcC-CCCC----------CCCCCCHHHHHH
Confidence 7999999887788999999999999999998 88887632 333333322221 1111 111233458889
Q ss_pred HhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 589 ALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 589 ~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
+.+||+.+|++|||+.++++.|+++
T Consensus 232 i~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 232 MKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHHhcCChhhCcCHHHHHHHHhcC
Confidence 9999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=306.16 Aligned_cols=254 Identities=27% Similarity=0.405 Sum_probs=191.1
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHh--ccCCCCCccccceEEEeCC----eEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKI--DHVKHPNVLPPLAYYCSKQ----EKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l--~~l~H~nIv~l~g~~~~~~----~~~lv~Ey~~~ 425 (626)
++||+|+||.||||.+. ++.||||++... ..+.|..|-++. -.++|+||++++++-.... +++||+||.+.
T Consensus 216 eli~~Grfg~V~KaqL~-~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~k 292 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ--EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPK 292 (534)
T ss_pred HHhhcCccceeehhhcc-CceeEEEecCHH--HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccC
Confidence 78999999999999986 489999999764 344566665554 5679999999999866555 89999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc-----cCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL-----REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~-----~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
|+|.+||.. ..++|....+|+.-+++||+|||++. +++.|+|||||++|||+.+|++++|+|||+|.....
T Consensus 293 GsL~dyL~~----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p 368 (534)
T KOG3653|consen 293 GSLCDYLKA----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEP 368 (534)
T ss_pred CcHHHHHHh----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecC
Confidence 999999963 46999999999999999999999764 356799999999999999999999999999865332
Q ss_pred -----CccccccccccchhhccccCCC------CCcchhHHHHHHHHHHHcCCCCCCC----------------CcchhH
Q 006903 501 -----DQSFLAQTSSLKINDISNQMCS------TIKADVYGFGVILLELLTGKLVQNN----------------GFNLAT 553 (626)
Q Consensus 501 -----~~~~~~~~~~~~~pe~~~~~~~------~~k~DVwSfGvvl~elltg~~p~~~----------------~~~~~~ 553 (626)
+...-.||..||+||++.+... -.+.||||+|.|||||+++-.-.+. ...+.+
T Consensus 369 ~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~ 448 (534)
T KOG3653|consen 369 GKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEE 448 (534)
T ss_pred CCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHH
Confidence 1223468999999998765422 2368999999999999997532210 001111
Q ss_pred HHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 554 WVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 554 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.-..++++..+..+.+.-. ....+..+.+.+..||..||+.|-|+.=|.+.+.++....
T Consensus 449 mq~~VV~kK~RP~~p~~W~-----~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 449 MQELVVRKKQRPKIPDAWR-----KHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred HHHHHHhhccCCCChhhhh-----cCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 1112222222222222211 1234667889999999999999999998888887765443
|
|
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=303.20 Aligned_cols=245 Identities=22% Similarity=0.356 Sum_probs=198.7
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|... |+.||+|.++......+++.+|+.++++++|+||+++++++...+..++||||+++++|.+
T Consensus 11 ~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 89 (256)
T cd05039 11 GATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVD 89 (256)
T ss_pred eeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHH
Confidence 478999999999999865 7899999998765556789999999999999999999999998899999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccccccccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS 510 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~~ 510 (626)
++.... ...+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||.++...........+..
T Consensus 90 ~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh----~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 164 (256)
T cd05039 90 YLRSRG-RAVITLAQQLGFALDVCEGMEYLE----EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVK 164 (256)
T ss_pred HHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH----hCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCccc
Confidence 996422 236899999999999999999999 679999999999999999999999999998765433332333456
Q ss_pred cchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHH
Q 006903 511 LKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVA 589 (626)
Q Consensus 511 ~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~ 589 (626)
|++||......++.++||||||+++||+++ |+.||... ...+...... ....... +...+..+.+++
T Consensus 165 ~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~li 232 (256)
T cd05039 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPHVE-KGYRMEA----------PEGCPPEVYKVM 232 (256)
T ss_pred ccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHh-cCCCCCC----------ccCCCHHHHHHH
Confidence 899998877778889999999999999997 88887633 2222222221 1111111 112234688999
Q ss_pred hhccCCCCCCCCCHHHHHHHHHhh
Q 006903 590 LRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 590 ~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.+||..+|++|||+.|++++|+++
T Consensus 233 ~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 233 KDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHhccChhhCcCHHHHHHHHhcC
Confidence 999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=308.07 Aligned_cols=246 Identities=17% Similarity=0.244 Sum_probs=192.5
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... ++..||||.+..... ...++.+|+.+++.++||||+++++++......++||||
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~ 90 (277)
T cd05062 11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 90 (277)
T ss_pred eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEec
Confidence 478999999999998742 356899999865432 234688999999999999999999999988999999999
Q ss_pred cCCCChhHhhcCCCC-------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 423 QPNGSLFNLLHGSEN-------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
+++|+|.++++.... ...+++..+..++.|++.||.||| +++++||||||+||++++++.++++|||++
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~ 166 (277)
T cd05062 91 MTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMT 166 (277)
T ss_pred CCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCcchheEEEcCCCCEEECCCCCc
Confidence 999999999864221 134688899999999999999999 679999999999999999999999999998
Q ss_pred cccCCCcc-----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 496 VTENHDQS-----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 496 ~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
+....... ...++..|++||......++.++|||||||++|||++ |+.||... ...+.......... ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~-~~~~~~~~~~~~~~-~~--- 241 (277)
T cd05062 167 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM-SNEQVLRFVMEGGL-LD--- 241 (277)
T ss_pred cccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHcCCc-CC---
Confidence 64322111 1123456999999887778999999999999999999 67777532 33333322222211 11
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
.+......+.+++.+||+.+|++|||+.|+++.|++
T Consensus 242 -------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 242 -------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 111223458889999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=309.88 Aligned_cols=239 Identities=17% Similarity=0.202 Sum_probs=189.4
Q ss_pred cccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 354 LGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 354 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
||+|+||+||++.. .+++.||+|.+..... ..+.+..|+++++.++||||+++.+++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999984 5789999999865432 124577899999999999999999999999999999999999999
Q ss_pred hHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccc
Q 006903 429 FNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSF 504 (626)
Q Consensus 429 ~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~ 504 (626)
.+++... .....+++..+..++.|++.||.||| +++|+||||||+||++++++.+||+|||++...... ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH----QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccc
Confidence 9887532 23356899999999999999999999 679999999999999999999999999998653222 122
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchh---HHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLA---TWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
..++..|++||......++.++|||||||++|||++|+.||....... ........... ..+...
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 224 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV------------TYPDKF 224 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC------------CCcccC
Confidence 356788999999888888999999999999999999999986432211 11111111100 011223
Q ss_pred HHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
...+.+++.+||+.||++|| +++++++
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 225 SPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 34578899999999999999 6677765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=309.77 Aligned_cols=255 Identities=23% Similarity=0.343 Sum_probs=191.8
Q ss_pred ccccccCCCcceEEEEeC-----CCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD-----DGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-----~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~Ey 422 (626)
.+.||+|+||.||++..+ ++..||+|++..... ..+.+.+|++++++++||||+++++++... ...++||||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 88 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEY 88 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEe
Confidence 478999999999999742 578999999876542 235789999999999999999999987543 468999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
+++|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||++.......
T Consensus 89 ~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH----~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 89 LPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLG----SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred cCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 9999999999632 346899999999999999999999 6799999999999999999999999999987543222
Q ss_pred cc------cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHH----
Q 006903 503 SF------LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL---- 572 (626)
Q Consensus 503 ~~------~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~---- 572 (626)
.. ...+..|++||......++.++|||||||++|||++|..++.... ..+.+........ ......+
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~ 239 (284)
T cd05081 163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPP--AEFMRMMGNDKQG-QMIVYHLIELL 239 (284)
T ss_pred cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcc--hhhhhhccccccc-ccchHHHHHHH
Confidence 11 112335889998877778899999999999999999876653211 1111111111000 0000000
Q ss_pred Hh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 573 IA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 573 ~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
.. ..........+.+++.+||+.+|++|||+.||++.|+.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 240 KNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred hcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 00 0011123346889999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=304.95 Aligned_cols=247 Identities=19% Similarity=0.296 Sum_probs=191.3
Q ss_pred ccccccCCCcceEEEEeCC-Cc--EEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEE
Q 006903 351 AELLGRGKHGSLYRVVLDD-GL--MLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~-g~--~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~l 418 (626)
.+.||+|+||.||+|...+ +. .||+|.++.... ..+.+.+|+++++.++||||+++++++... ...++
T Consensus 4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 83 (272)
T cd05075 4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVV 83 (272)
T ss_pred ccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEE
Confidence 4789999999999999654 33 699998875432 235688999999999999999999987532 24689
Q ss_pred EEeecCCCChhHhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 419 VYEYQPNGSLFNLLHGSE---NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
+|||+++|+|.+++.... ....+++.....++.|++.||+||| +++|+||||||+|||+++++.+||+|||++
T Consensus 84 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 84 ILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS----SKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred EEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH----HCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 999999999999874211 2345899999999999999999999 679999999999999999999999999998
Q ss_pred cccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 496 VTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 496 ~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
+...... .....+..|++||......++.++|||||||++|||++ |+.||... ...+............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~---- 234 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV-ENSEIYDYLRQGNRLK---- 234 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHcCCCCC----
Confidence 7543211 12234556889998888888999999999999999999 78887642 2233322222221110
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
........+.+++.+||+.||++|||+.++++.|+++
T Consensus 235 -------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 235 -------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred -------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0112234578999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-37 Score=319.43 Aligned_cols=239 Identities=18% Similarity=0.281 Sum_probs=189.2
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
++||+|+||.||+++. .+++.||+|.++.... ..+.+.+|+.++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999985 4689999999975432 224577899999888 799999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc---CCCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE---NHDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~---~~~~ 502 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.. ....
T Consensus 81 g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (329)
T cd05588 81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNFLH----ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT 153 (329)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcc
Confidence 999998853 346899999999999999999999 679999999999999999999999999998642 1222
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCC-------cchhHHHHHHhhcccccccccHHHHhh
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNG-------FNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~-------~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
....++..|++||......++.++|||||||++|||+||+.||... ....++.......... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------- 223 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI-R--------- 223 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC-C---------
Confidence 3345788899999988888899999999999999999999998521 1111222221111100 0
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCC------HHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPS------MNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs------~~ev~~ 608 (626)
.+......+.+++.+||+.||++||+ ++|+++
T Consensus 224 -~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 224 -IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred -CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 01112335788999999999999997 567754
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=314.79 Aligned_cols=236 Identities=19% Similarity=0.256 Sum_probs=186.0
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhcc-CCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDH-VKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~-l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|.. .+++.||+|.++... ...+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999985 468899999987532 222345566666654 4899999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|.+++.. ...+++.....++.|++.||.||| +++|+||||||+|||++.++.+||+|||++.... ...
T Consensus 81 g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH----~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~ 153 (316)
T cd05592 81 GDLMFHIQS---SGRFDEARARFYAAEIICGLQFLH----KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA 153 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcc
Confidence 999999853 346889999999999999999999 6799999999999999999999999999986432 122
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||++|+.||.... ..+....+...... .+....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~-~~~~~~~i~~~~~~------------~~~~~~ 220 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED-EDELFDSILNDRPH------------FPRWIS 220 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCC------------CCCCCC
Confidence 33457889999999888888999999999999999999999997432 22333332221110 011122
Q ss_pred HHHHHHHhhccCCCCCCCCCHH-HHH
Q 006903 583 LKLLQVALRCINQSPNERPSMN-QVA 607 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~-ev~ 607 (626)
..+.+++.+||+.||++||++. ++.
T Consensus 221 ~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 221 KEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHHH
Confidence 3467888999999999999976 453
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-37 Score=318.95 Aligned_cols=234 Identities=19% Similarity=0.279 Sum_probs=184.8
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
++||+|+||.||+|.. .+++.||+|.++.... ..+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 3699999999999995 4688999999975432 224577888888766 899999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|..++.. ...+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||+++... ...
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~ 153 (329)
T cd05618 81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 153 (329)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcc
Confidence 999998853 346899999999999999999999 6799999999999999999999999999986422 122
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCC-------cchhHHHHHHhhcccccccccHHHHhh
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNG-------FNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~-------~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
....++..|++||......++.++|||||||++|||+||+.||... .....+.......... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~--------- 223 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-R--------- 223 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-C---------
Confidence 3345788899999988888899999999999999999999998521 1111222221111100 0
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
.+......+.+++.+||+.||++||++
T Consensus 224 -~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 224 -IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 111223457789999999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=317.82 Aligned_cols=242 Identities=20% Similarity=0.295 Sum_probs=207.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCe-EEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE-KLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~-~~lv~Ey~~~ 425 (626)
.+++|+|+||.++.++. .++..+++|++..... ..+....|+.++++++|||||.+.+.|..++. .+|||+|++|
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eG 88 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEG 88 (426)
T ss_pred hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCC
Confidence 37899999999999874 4678999999976553 33467899999999999999999999999888 8999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|++.+.+...+ +..++...+..++.|++.|+.||| +++|+|||||+.||++..+..+|++|||+|+......
T Consensus 89 g~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH----~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a 163 (426)
T KOG0589|consen 89 GDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLH----ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLA 163 (426)
T ss_pred CCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHH----hhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhh
Confidence 99999997643 567899999999999999999999 6789999999999999999999999999998765543
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....||++|+.||+....+|+.|+||||+||++|||++-+++|. +.++...+..+.+.... ..+..+.
T Consensus 164 ~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~-a~~m~~Li~ki~~~~~~-----------Plp~~ys 231 (426)
T KOG0589|consen 164 STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFK-ASNMSELILKINRGLYS-----------PLPSMYS 231 (426)
T ss_pred heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccC-ccchHHHHHHHhhccCC-----------CCCcccc
Confidence 44679999999999999999999999999999999999999986 45666666666554311 1233345
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+..++..|++.+|+.||++.+++.+
T Consensus 232 ~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 232 SELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 568888999999999999999999875
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=307.40 Aligned_cols=249 Identities=19% Similarity=0.272 Sum_probs=197.6
Q ss_pred ccccccCCCcceEEEEeCC-----CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEe-CCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLDD-----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCS-KQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~-----g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-~~~~~lv~Ey 422 (626)
.++||+|+||.||+|...+ +..||+|.+..... ..+.+.+|++++++++||||+++++++.. ....++++||
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~ 90 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPY 90 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEc
Confidence 4789999999999999654 78899999875432 23568899999999999999999998776 4678999999
Q ss_pred cCCCChhHhhcCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 423 QPNGSLFNLLHGSENG-----QSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~-----~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
+++|+|.+++...... ..+++..++.++.+++.||+||| +++++||||||+||++++++.+||+|||+++.
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH----~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~ 166 (280)
T cd05043 91 MNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH----KRGVIHKDIAARNCVIDEELQVKITDNALSRD 166 (280)
T ss_pred CCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccCHhhEEEcCCCcEEECCCCCccc
Confidence 9999999998643222 56899999999999999999999 67999999999999999999999999999864
Q ss_pred cCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHH
Q 006903 498 ENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 498 ~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
..... ....++..|++||......++.++|||||||++||+++ |+.||... +..++....... ....
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~-~~~~----- 239 (280)
T cd05043 167 LFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI-DPFEMAAYLKDG-YRLA----- 239 (280)
T ss_pred ccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC-CHHHHHHHHHcC-CCCC-----
Confidence 32211 11233556899998877788999999999999999999 99998643 223332222221 1100
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
........+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus 240 -----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 240 -----QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred -----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 011123458899999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=303.41 Aligned_cols=243 Identities=21% Similarity=0.317 Sum_probs=192.4
Q ss_pred cccccCCCcceEEEEeC--C--CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVLD--D--GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~--~--g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|.+. + +..+|+|.+..... ..+++.+|+++++.++||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 36999999999999742 2 36899999986554 3467899999999999999999999765 4568999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|.+++... ..+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+|++|||+++.........
T Consensus 80 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh----~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKKR---REIPVSDLKELAHQVAMGMAYLE----SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHh----hcCeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 9999999632 36899999999999999999999 6789999999999999999999999999986543222111
Q ss_pred ------ccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 506 ------AQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 506 ------~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
.++..|++||......++.++|||||||++|||++ |+.||..... .+......... ... ..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-~~~~~~~~~~~-~~~----------~~ 220 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-AEVIAMLESGE-RLP----------RP 220 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-HHHHHHHHcCC-cCC----------CC
Confidence 11245899998877788999999999999999998 8888864322 22222222111 110 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
......+.+++.+||+.+|++||++.++++.|+++.
T Consensus 221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 221 EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 122346889999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=310.25 Aligned_cols=246 Identities=20% Similarity=0.274 Sum_probs=193.5
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---------------CHHHHHHHHHHhccCCCCCccccceEEEeC-
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---------------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK- 413 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---------------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~- 413 (626)
...||+|.||.|-+|+ ..+++.||||++.+... ..+...+||.+|++++|||||+|+++..+.
T Consensus 102 ~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~ 181 (576)
T KOG0585|consen 102 IKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPE 181 (576)
T ss_pred hhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcc
Confidence 3679999999999998 55799999999965321 125789999999999999999999987664
Q ss_pred -CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeec
Q 006903 414 -QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEY 492 (626)
Q Consensus 414 -~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 492 (626)
+..|||+|||..|.+...- .....++..+..+|+.++..||.||| .+|||||||||+|+||++++++||+||
T Consensus 182 s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH----~QgiiHRDIKPsNLLl~~~g~VKIsDF 254 (576)
T KOG0585|consen 182 SDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLH----YQGIIHRDIKPSNLLLSSDGTVKISDF 254 (576)
T ss_pred cCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHH----hcCeeccccchhheEEcCCCcEEeecc
Confidence 5789999999998875433 12223899999999999999999999 679999999999999999999999999
Q ss_pred cCccccCC--------CccccccccccchhhccccC----CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh
Q 006903 493 GLIVTENH--------DQSFLAQTSSLKINDISNQM----CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR 560 (626)
Q Consensus 493 Gl~~~~~~--------~~~~~~~~~~~~~pe~~~~~----~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~ 560 (626)
|.+..... .-....||+.|+|||..... ..+.+.||||+||+||.|+.|+.||.+... .+.++.+..
T Consensus 255 GVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~-~~l~~KIvn 333 (576)
T KOG0585|consen 255 GVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE-LELFDKIVN 333 (576)
T ss_pred ceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH-HHHHHHHhc
Confidence 98764311 11236789999999976542 346789999999999999999999986543 344444444
Q ss_pred cccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 561 EEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 561 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
+.... + ..++....+.+|+.++|++||++|.+..+|......-.
T Consensus 334 ~pL~f---------P-~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 334 DPLEF---------P-ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred CcccC---------C-CcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 32111 1 11234556889999999999999999999987765433
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=320.94 Aligned_cols=234 Identities=21% Similarity=0.282 Sum_probs=189.2
Q ss_pred cccccCCCcceEEEEe----CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 352 ELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
+.||+|+||.||+++. .+|+.||+|+++.... ....+.+|++++++++||||+++++++..++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 3689999999975432 23457789999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
+|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||++......
T Consensus 82 ~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 82 GGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLH----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence 9999999953 346899999999999999999999 679999999999999999999999999998653322
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....++..|++||......++.++|||||||++|||+||+.||.... ..+....+...... .+...
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~-~~~~~~~i~~~~~~------------~p~~~ 221 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD-RKETMTMILKAKLG------------MPQFL 221 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC-HHHHHHHHHcCCCC------------CCCCC
Confidence 223456788999999887788999999999999999999999997432 22333333222111 01112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQ 605 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~e 605 (626)
...+.+++.+||+.||++||++.+
T Consensus 222 ~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 222 SPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCC
Confidence 234778899999999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=304.37 Aligned_cols=247 Identities=19% Similarity=0.334 Sum_probs=194.3
Q ss_pred ccccccCCCcceEEEEeC-C---CcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCe------EE
Q 006903 351 AELLGRGKHGSLYRVVLD-D---GLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE------KL 417 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~---g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~------~~ 417 (626)
.+.||+|+||.||+|... + +..||+|+++..... .+.+.+|++.++.++||||+++++++..... .+
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05035 4 GKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPM 83 (273)
T ss_pred ccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccE
Confidence 468999999999999853 2 478999998764432 2468899999999999999999998866544 79
Q ss_pred EEEeecCCCChhHhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccC
Q 006903 418 LVYEYQPNGSLFNLLHGSE---NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL 494 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 494 (626)
++|||+++|+|.+++.... ....+++.....++.|++.||.||| +.+|+||||||+||++++++.+||+|||+
T Consensus 84 ~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 84 VILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS----NRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred EEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH----hCCeeccccchheEEECCCCeEEECCccc
Confidence 9999999999999985422 2246899999999999999999999 67999999999999999999999999999
Q ss_pred ccccCCCcc-----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 495 IVTENHDQS-----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 495 ~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
++....... ....+..|++||......++.++|||||||++|||++ |..||... ...+........... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~-~-- 235 (273)
T cd05035 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGV-ENHEIYDYLRHGNRL-K-- 235 (273)
T ss_pred eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCCCC-C--
Confidence 875432211 1223456889998877788999999999999999999 77887543 323333333222111 0
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.+......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 236 --------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 --------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred --------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1122344688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=302.41 Aligned_cols=244 Identities=24% Similarity=0.389 Sum_probs=196.7
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...++..+|+|.+.......+++.+|+.++++++|+|++++++++. .+..+++|||+++++|.+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~ 89 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLD 89 (260)
T ss_pred hheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHH
Confidence 4689999999999999888889999999876666778999999999999999999999874 456899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----ccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS----FLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~----~~~ 506 (626)
+++.. ....+++..+..++.+++.||+||| +++|+||||||+||++++++.++++|||++........ ...
T Consensus 90 ~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 164 (260)
T cd05070 90 FLKDG-EGRALKLPNLVDMAAQVAAGMAYIE----RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAK 164 (260)
T ss_pred HHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCC
Confidence 99642 2346899999999999999999999 67999999999999999999999999999865332211 112
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++|||++ |+.||... +..+......... ... .+......+
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~-~~~~~~~~~~~~~-~~~----------~~~~~~~~~ 232 (260)
T cd05070 165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM-NNREVLEQVERGY-RMP----------CPQDCPISL 232 (260)
T ss_pred CCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHcCC-CCC----------CCCcCCHHH
Confidence 3446899998877778899999999999999999 88888643 2223332222111 100 111223458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
.+++.+||+.+|++|||++++.+.|++
T Consensus 233 ~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 233 HELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=322.24 Aligned_cols=258 Identities=17% Similarity=0.276 Sum_probs=198.8
Q ss_pred ccchhhhhcccccccccCCCcceEEEEeC------CCcEEEEEEcCCCCCC--HHHHHHHHHHhccCC-CCCccccceEE
Q 006903 340 KLKFEDLLRAPAELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVK-HPNVLPPLAYY 410 (626)
Q Consensus 340 ~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~-H~nIv~l~g~~ 410 (626)
.++.+++. ..+.||+|+||.||+|+.. .+..||+|+++..... .+.+.+|++++.++. |||||++++++
T Consensus 33 ~~~~~~~~--~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 33 EMPRDNLV--LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred eecHHHee--hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 34444443 3588999999999999853 3468999999764322 346889999999997 99999999999
Q ss_pred EeCCeEEEEEeecCCCChhHhhcCCC------------------------------------------------------
Q 006903 411 CSKQEKLLVYEYQPNGSLFNLLHGSE------------------------------------------------------ 436 (626)
Q Consensus 411 ~~~~~~~lv~Ey~~~g~L~~~l~~~~------------------------------------------------------ 436 (626)
...+..++||||+++|+|.++++..+
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 99999999999999999999996421
Q ss_pred -----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCC
Q 006903 437 -----------------------------------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLK 475 (626)
Q Consensus 437 -----------------------------------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlk 475 (626)
....++|...+.++.|++.||.||| +++|+|||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrdlk 266 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA----SKNCVHRDLA 266 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh----cCCcCcccCC
Confidence 1124788889999999999999999 6899999999
Q ss_pred CCCeeeCCCCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCc
Q 006903 476 SNNILFNNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGF 549 (626)
Q Consensus 476 p~NILl~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~ 549 (626)
|+|||+++++.+|++|||+++...... ....++..|++||......++.++|||||||++|||++ |+.||....
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred cceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999986532211 11234567899998887778999999999999999998 888876432
Q ss_pred chhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 550 NLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
. .+............. .+......+.+++.+||+.+|++||+++||++.|+++.
T Consensus 347 ~-~~~~~~~~~~~~~~~----------~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 347 M-NEQFYNAIKRGYRMA----------KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred c-hHHHHHHHHcCCCCC----------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 2 222112111111110 01112345888999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=314.38 Aligned_cols=236 Identities=19% Similarity=0.249 Sum_probs=187.5
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhcc-CCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDH-VKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~-l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|+. .+|+.||+|.++... ...+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 3699999999999995 468999999987532 223456677777765 4899999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|.+++.. ...+++.....++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++... ...
T Consensus 81 g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05620 81 GDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLH----SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA 153 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCce
Confidence 999999853 346889999999999999999999 6799999999999999999999999999976421 122
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||++|+.||.... ..+....+...... .+....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~-~~~~~~~~~~~~~~------------~~~~~~ 220 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD-EDELFESIRVDTPH------------YPRWIT 220 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCC------------CCCCCC
Confidence 33457889999999888888999999999999999999999997432 22322222211100 011122
Q ss_pred HHHHHHHhhccCCCCCCCCCHH-HHH
Q 006903 583 LKLLQVALRCINQSPNERPSMN-QVA 607 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~-ev~ 607 (626)
..+.+++.+||+.||++||++. ++.
T Consensus 221 ~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 221 KESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHHH
Confidence 3477889999999999999985 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=315.07 Aligned_cols=237 Identities=20% Similarity=0.259 Sum_probs=190.6
Q ss_pred cccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|... +++.||||.++... ...+.+.+|++++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999854 58899999987542 2234567888888877 699999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||+++... ...
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (318)
T cd05570 81 GDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLH----ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT 153 (318)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc
Confidence 999998853 346899999999999999999999 6799999999999999999999999999986421 112
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||+||+.||... +..+....+...... .+....
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~-~~~~~~~~i~~~~~~------------~~~~~~ 220 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD-DEDELFQSILEDEVR------------YPRWLS 220 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCC-CHHHHHHHHHcCCCC------------CCCcCC
Confidence 2335778899999998888899999999999999999999999643 223333332222111 011123
Q ss_pred HHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSM-----NQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~-----~ev~~ 608 (626)
..+.+++.+||+.||++||++ .++++
T Consensus 221 ~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 221 KEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 357889999999999999999 77765
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=306.76 Aligned_cols=246 Identities=17% Similarity=0.300 Sum_probs=194.3
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... ++..||+|+++..... .+.+.+|+.++..++||||+++++++...+..++++||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~ 89 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSY 89 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEc
Confidence 367999999999999853 3578999999754432 35688999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEE
Q 006903 423 QPNGSLFNLLHGSE-------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCI 489 (626)
Q Consensus 423 ~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl 489 (626)
+++++|.+++.... ....+++..+++++.|++.||.|+| +++|+||||||+||++++++.+||
T Consensus 90 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH----~~gi~H~dlkp~Nil~~~~~~~kl 165 (283)
T cd05091 90 CSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS----SHHVVHKDLATRNVLVFDKLNVKI 165 (283)
T ss_pred CCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH----HcCccccccchhheEecCCCceEe
Confidence 99999999985211 1235889999999999999999999 679999999999999999999999
Q ss_pred eeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccc
Q 006903 490 SEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEW 563 (626)
Q Consensus 490 ~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 563 (626)
+|||+++...... ....++..|++||......++.++|||||||++|||+| |..|+.. ....++...+.....
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~-~~~~~~~~~i~~~~~ 244 (283)
T cd05091 166 SDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG-YSNQDVIEMIRNRQV 244 (283)
T ss_pred cccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCCc
Confidence 9999976432211 11223567999998877778999999999999999998 7777753 333344444333221
Q ss_pred ccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 564 TVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 564 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
. .........+.+++.+||+.+|++||++++|+..|+.
T Consensus 245 ~-----------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 245 L-----------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred C-----------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1 0112233458889999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=302.32 Aligned_cols=238 Identities=21% Similarity=0.254 Sum_probs=186.7
Q ss_pred cccccCCCcceEEEEeCC-C----------cEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEE
Q 006903 352 ELLGRGKHGSLYRVVLDD-G----------LMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~-g----------~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
+.||+|+||.||+|...+ + ..+++|.+.........+.+|++++++++||||+++++++.. +..++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 369999999999999654 3 358888876554446789999999999999999999999888 7789999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-------CeEEeecc
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-------EPCISEYG 493 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-------~~kl~DFG 493 (626)
||+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+|++|||
T Consensus 80 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 80 EYVKFGPLDVFLHRE--KNNVSLHWKLDVAKQLASALHYLE----DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EcCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHh----hCCeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 999999999999642 236899999999999999999999 68999999999999999888 79999999
Q ss_pred CccccCCCccccccccccchhhccccC--CCCCcchhHHHHHHHHHHHcC-CCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 494 LIVTENHDQSFLAQTSSLKINDISNQM--CSTIKADVYGFGVILLELLTG-KLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 494 l~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~k~DVwSfGvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
++..... .....+...|++||..... .++.++|||||||++|||++| ..|+.... ..++........ ...
T Consensus 154 ~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~-~~~~~~~~~~~~-~~~---- 226 (259)
T cd05037 154 IPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS-SSEKERFYQDQH-RLP---- 226 (259)
T ss_pred ccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC-chhHHHHHhcCC-CCC----
Confidence 9876433 2223345678999987665 678999999999999999995 66664322 222222111110 000
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 227 --------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 227 --------MPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred --------CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 000146889999999999999999999998773
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=301.54 Aligned_cols=243 Identities=21% Similarity=0.313 Sum_probs=194.2
Q ss_pred cccccCCCcceEEEEeCC--C--cEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVLDD--G--LMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~--g--~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|...+ + ..||||.+..... ..+.+.+|++.+++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 368999999999998543 3 3699999987654 34578999999999999999999999888 889999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++..... ..++|.....++.|++.||+||| +++++||||||+||+++.++.+|++|||++.......
T Consensus 80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLE----SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHH----hCCccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999975332 56899999999999999999999 6799999999999999999999999999986543211
Q ss_pred ---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 ---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....++..|++||......++.++|||||||++|||+| |+.|+... +..+..+.......... .+
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~~----------~~ 223 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL-SGSQILKKIDKEGERLE----------RP 223 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHhcCCcCC----------CC
Confidence 12234567899998887788999999999999999999 99998643 22233333222111110 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 122346888999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=307.77 Aligned_cols=249 Identities=21% Similarity=0.327 Sum_probs=195.6
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... ....+|+|.+..... ..+++.+|+++++.++||||+++++.+...+..+++|||
T Consensus 5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (290)
T cd05045 5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEY 84 (290)
T ss_pred cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEe
Confidence 478999999999999842 235799998875442 235788999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee
Q 006903 423 QPNGSLFNLLHGSE---------------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF 481 (626)
Q Consensus 423 ~~~g~L~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl 481 (626)
+++|+|.+++.... ....+++..++.++.|++.||.||| +.+|+||||||+|||+
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH----~~~ivH~dikp~nill 160 (290)
T cd05045 85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA----EMKLVHRDLAARNVLV 160 (290)
T ss_pred cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH----HCCeehhhhhhheEEE
Confidence 99999999985321 1235889999999999999999999 6799999999999999
Q ss_pred CCCCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHH
Q 006903 482 NNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWV 555 (626)
Q Consensus 482 ~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~ 555 (626)
++++.+||+|||+++...... ....++..|++||......++.++||||||+++|||+| |+.||... ...+..
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-~~~~~~ 239 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI-APERLF 239 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC-CHHHHH
Confidence 999999999999986432211 12233557899998877778999999999999999999 88888533 222222
Q ss_pred HHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 556 HSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 556 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
... ....... .+......+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 240 ~~~-~~~~~~~----------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 240 NLL-KTGYRME----------RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHH-hCCCCCC----------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 222 1111110 011223458889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=321.55 Aligned_cols=245 Identities=16% Similarity=0.228 Sum_probs=187.6
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||++. ..+++.||+|.... +.+.+|++++++++|||||++++++......++||||+. ++|.
T Consensus 97 ~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~ 170 (391)
T PHA03212 97 LETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLY 170 (391)
T ss_pred EEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHH
Confidence 4789999999999998 45789999997542 457899999999999999999999999999999999995 6898
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC----Ccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH----DQSFL 505 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~----~~~~~ 505 (626)
+++.. ...+++..++.++.|++.||.||| +++||||||||+|||++.++.+||+|||+++.... .....
T Consensus 171 ~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH----~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 243 (391)
T PHA03212 171 CYLAA---KRNIAICDILAIERSVLRAIQYLH----ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGW 243 (391)
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccc
Confidence 88853 346889999999999999999999 67999999999999999999999999999864221 12234
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc------hhHHHHHHhhc------ccccc---cccH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN------LATWVHSVVRE------EWTVE---VFDE 570 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~------~~~~~~~~~~~------~~~~~---~~d~ 570 (626)
.++..|++||......++.++|||||||++|||+||+.|+..... ....+..+... .+... ..+.
T Consensus 244 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~ 323 (391)
T PHA03212 244 AGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDE 323 (391)
T ss_pred cCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHH
Confidence 678899999998888889999999999999999999987643211 11111111100 00000 0000
Q ss_pred HH----H------h----hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 VL----I------A----EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 ~~----~------~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. . . ..........+.+++.+||+.||++|||++|+++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 324 IYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 0 0 0000122346889999999999999999999985
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=331.71 Aligned_cols=250 Identities=19% Similarity=0.242 Sum_probs=199.7
Q ss_pred ccccccccCCCcceEEEEeCCC-cEEEEEEcCCCC-CCHHHHHHHHHHhccCC-CCCccccce-EEEe---C---CeEEE
Q 006903 349 APAELLGRGKHGSLYRVVLDDG-LMLAVKRLRDWS-ISSEDFKNRMQKIDHVK-HPNVLPPLA-YYCS---K---QEKLL 418 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~~~g-~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~-H~nIv~l~g-~~~~---~---~~~~l 418 (626)
...++|.+|||+.||.|....+ ..||+|++-..+ ..-+.+.+||++|+.|+ |+|||.+++ .... . -+.+|
T Consensus 40 ~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evll 119 (738)
T KOG1989|consen 40 TVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLL 119 (738)
T ss_pred EEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEe
Confidence 3457899999999999996655 999999987654 33467899999999997 999999999 3222 1 35789
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
.||||++|.|-+++..+.. ..|+..++++|+.++++|+++||.. ++.|||||||.+||||+.++..||||||-+...
T Consensus 120 LmEyC~gg~Lvd~mn~Rlq-~~lte~eVLkIf~dv~~AVa~mH~~--~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 120 LMEYCKGGSLVDFMNTRLQ-TRLTEDEVLKIFYDVCEAVAAMHYL--KPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred ehhhccCCcHHHHHHHHHh-ccCChHHHHHHHHHHHHHHHHHhcC--CCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 9999999999999975332 3499999999999999999999943 678999999999999999999999999987542
Q ss_pred CCCc------------cccccccccchhhcc---ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc
Q 006903 499 NHDQ------------SFLAQTSSLKINDIS---NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW 563 (626)
Q Consensus 499 ~~~~------------~~~~~~~~~~~pe~~---~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 563 (626)
.... -...+|+.|++||++ .+...++|+||||+||+||-|+....||+++..++ ++...+
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la-----Ilng~Y 271 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA-----ILNGNY 271 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee-----EEeccc
Confidence 2111 123568899999975 45567999999999999999999999998653321 111111
Q ss_pred ccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 564 TVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 564 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
. .+ ..+.+...+.+||..||+.||++||++-||+..+-++...
T Consensus 272 ~---------~P-~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 272 S---------FP-PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred c---------CC-CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 1 11 1135667799999999999999999999999999888754
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=313.73 Aligned_cols=191 Identities=20% Similarity=0.268 Sum_probs=165.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||++... ++..+|+|.+..... ..+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 10 ~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 89 (333)
T cd06650 10 ISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 89 (333)
T ss_pred eccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCc
Confidence 478999999999999854 688999998875432 23568899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-Cccccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-DQSFLA 506 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~~~~~~ 506 (626)
|.+++.. ...+++.....++.+++.||.|||+ ..+|+||||||+|||++.++.+||+|||++..... ......
T Consensus 90 L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 163 (333)
T cd06650 90 LDQVLKK---AGRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (333)
T ss_pred HHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence 9999963 3458889999999999999999994 34799999999999999999999999999864322 222345
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCC
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNN 547 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~ 547 (626)
++..|++||......++.++|||||||++|||++|+.||..
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred CCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 67789999998877889999999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=302.89 Aligned_cols=249 Identities=19% Similarity=0.303 Sum_probs=199.0
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||+|+||.||++. ..+++.+|||.+..... ..+++.+|+++++.++||||+++++++..++..+++|||++++
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 87 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAG 87 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCC
Confidence 679999999999999 46799999998865332 2357889999999999999999999999999999999999999
Q ss_pred ChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 427 SLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 427 ~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
+|.+++... .....+++..+..++.+++.||.||| +++|+|+||||+||+++.++.++++|||++.......
T Consensus 88 ~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd08229 88 DLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 163 (267)
T ss_pred CHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCccc
Confidence 999998632 22356899999999999999999999 6899999999999999999999999999876432221
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc-chhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF-NLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||.......+.++||||||+++|||++|..||.... +.....+......... ......
T Consensus 164 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 233 (267)
T cd08229 164 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP----------LPSDHY 233 (267)
T ss_pred ccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCC----------CCcccc
Confidence 12346678999998877778899999999999999999999986322 2222222221111100 011123
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
...+.+++.+||+.+|++||||.+|++.++++.
T Consensus 234 ~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 234 SEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred cHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 345888999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=309.27 Aligned_cols=246 Identities=22% Similarity=0.287 Sum_probs=191.9
Q ss_pred ccccccCCCcceEEEEe-----CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-----DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~E 421 (626)
.+.||+|+||.||++.+ .++..||+|.++... ...+.+.+|++++++++||||+++.+++... ...++|||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (284)
T cd05079 9 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 88 (284)
T ss_pred ceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEE
Confidence 46799999999999974 357899999987543 2335789999999999999999999988775 56899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++++|.+++... ...++|..++.++.+++.||+|+| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH----~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 89 FLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLG----SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred ccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 99999999999632 346899999999999999999999 689999999999999999999999999998653221
Q ss_pred c------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcch--------------hHHHHHHhhc
Q 006903 502 Q------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNL--------------ATWVHSVVRE 561 (626)
Q Consensus 502 ~------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~--------------~~~~~~~~~~ 561 (626)
. ....++..|++||......++.++|||||||++|||+|++.|....... ....... ..
T Consensus 163 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 241 (284)
T cd05079 163 KEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL-EE 241 (284)
T ss_pred ccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH-Hc
Confidence 1 1233455689999877777889999999999999999987664321110 0000000 00
Q ss_pred ccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 562 EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 562 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
... .......+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 242 ~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 242 GKR----------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred Ccc----------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000 001112345689999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=307.35 Aligned_cols=239 Identities=16% Similarity=0.221 Sum_probs=188.2
Q ss_pred cccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 354 LGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 354 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
||+|+||.||++.. .+|+.||+|.+..... ....+..|++++++++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999984 5699999999864321 223456799999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--SFLA 506 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~~~~ 506 (626)
.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||++++++.++|+|||++....... ....
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 155 (277)
T cd05607 81 KYHIYNV-GERGLEMERVIHYSAQITCGILHLH----SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRA 155 (277)
T ss_pred HHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHH----HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccC
Confidence 9888542 2346899999999999999999999 6899999999999999999999999999976543221 2235
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcch---hHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNL---ATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
++..|++||......++.++|||||||++|||++|+.||...... .+............ .......
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 224 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF-----------EHQNFTE 224 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc-----------ccccCCH
Confidence 677899999988777899999999999999999999998643221 11111111111000 0011233
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+++.+||+.||++||+++|+++
T Consensus 225 ~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 225 ESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred HHHHHHHHHhccCHhhCCCCccchh
Confidence 5788999999999999999977653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=303.17 Aligned_cols=245 Identities=19% Similarity=0.302 Sum_probs=194.7
Q ss_pred ccccccCCCcceEEEEeC-CC---cEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DG---LMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g---~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|... ++ ..+|+|.++.... ..+++..|++++++++||||+++.+++...+..++||||++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYME 89 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCC
Confidence 478999999999999864 33 3799999875432 24578899999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccc
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF 504 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~ 504 (626)
+++|.+++.. ....+++..+..++.+++.|++||| +.+|+||||||+||++++++.+|++|||++.........
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 163 (268)
T cd05063 90 NGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYLS----DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG 163 (268)
T ss_pred CCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccchhhEEEcCCCcEEECCCccceeccccccc
Confidence 9999999963 2356899999999999999999999 679999999999999999999999999997643221110
Q ss_pred ------cccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 505 ------LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 505 ------~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
...+..|++||......++.++|||||||++|||+| |+.||.... ..++...+....... .
T Consensus 164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~-~~~~~~~i~~~~~~~-----------~ 231 (268)
T cd05063 164 TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS-NHEVMKAINDGFRLP-----------A 231 (268)
T ss_pred ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC-HHHHHHHHhcCCCCC-----------C
Confidence 112335899998877778899999999999999998 999986432 223333322211100 1
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.......+.+++.+||+.+|++||++.+|++.|+++
T Consensus 232 ~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 232 PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 112334588999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=308.09 Aligned_cols=248 Identities=20% Similarity=0.301 Sum_probs=195.6
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCCC--HHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||++... ....+|+|.+...... ..++.+|++++.++ +||||+++++++..++..+++||
T Consensus 17 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e 96 (293)
T cd05053 17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVE 96 (293)
T ss_pred eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEE
Confidence 478999999999999853 2468999998754322 24688999999999 89999999999999999999999
Q ss_pred ecCCCChhHhhcCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeE
Q 006903 422 YQPNGSLFNLLHGS-------------ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPC 488 (626)
Q Consensus 422 y~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~k 488 (626)
|+++|+|.++++.. .....+++..++.++.|++.||+||| +++|+||||||+||++++++.+|
T Consensus 97 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivH~dlkp~Nil~~~~~~~k 172 (293)
T cd05053 97 YAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA----SKKCIHRDLAARNVLVTEDHVMK 172 (293)
T ss_pred eCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH----HCCccccccceeeEEEcCCCeEE
Confidence 99999999999642 12346899999999999999999999 67999999999999999999999
Q ss_pred EeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcc
Q 006903 489 ISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREE 562 (626)
Q Consensus 489 l~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 562 (626)
++|||+++...... .....+..|++||......++.++|||||||++|||++ |..|+... ...+.........
T Consensus 173 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~ 251 (293)
T cd05053 173 IADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-PVEELFKLLKEGY 251 (293)
T ss_pred eCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC-CHHHHHHHHHcCC
Confidence 99999986533211 11123456899998877788999999999999999998 88887632 2222222222111
Q ss_pred cccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 563 WTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 563 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
... .+......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 252 -~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 252 -RME----------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -cCC----------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 110 11122345889999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=307.16 Aligned_cols=251 Identities=17% Similarity=0.250 Sum_probs=186.2
Q ss_pred ccccccCCCcceEEEEe-C-CCcEEEEEEcCCCCC---CHHHHHHHHHHhccC---CCCCccccceEEEe-----CCeEE
Q 006903 351 AELLGRGKHGSLYRVVL-D-DGLMLAVKRLRDWSI---SSEDFKNRMQKIDHV---KHPNVLPPLAYYCS-----KQEKL 417 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~-~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l---~H~nIv~l~g~~~~-----~~~~~ 417 (626)
.+.||+|+||.||+|+. . +++.||+|.++.... ....+.+|+++++.+ +||||+++++++.. ....+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~ 85 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 85 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence 36799999999999985 3 468899999875432 234566777776655 69999999998752 34689
Q ss_pred EEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 418 LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
+||||++ ++|.+++... ....+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.
T Consensus 86 lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH----~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 86 LVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred EEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 9999996 6999998642 2345899999999999999999999 67999999999999999999999999999865
Q ss_pred cCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-------ccccc--
Q 006903 498 ENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-------EWTVE-- 566 (626)
Q Consensus 498 ~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-------~~~~~-- 566 (626)
.... .....++..|++||......++.++|||||||++|||++|++||....+.. .+..+... .+..+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 238 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDWPRDVA 238 (290)
T ss_pred ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhchhhhc
Confidence 4322 233456788999999887788999999999999999999999997544322 22222111 00000
Q ss_pred ----cccHHH--HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 ----VFDEVL--IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 ----~~d~~~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.... ......+.....+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 239 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred ccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000000 000001112345778999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=304.46 Aligned_cols=240 Identities=20% Similarity=0.315 Sum_probs=185.1
Q ss_pred cccccCCCcceEEEEeCC--------CcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLDD--------GLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~--------g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
+.||+|+||.||+|.... ...||+|.+..... ..+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999998532 23488888765432 335788999999999999999999999998999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC--------eEEeeccC
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME--------PCISEYGL 494 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~--------~kl~DFGl 494 (626)
+++|+|.++++.. +..+++..++.++.|++.||+||| +.+|+||||||+||+++.++. ++++|||+
T Consensus 81 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH----~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 81 VKFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLE----DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred CCCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 9999999999742 346899999999999999999999 679999999999999987765 58999998
Q ss_pred ccccCCCccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHH
Q 006903 495 IVTENHDQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
+..... .....++..|++||.... ..++.++|||||||++|||++|..++....+...... ...... .
T Consensus 155 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~--~------- 223 (258)
T cd05078 155 SITVLP-KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYEDRH--Q------- 223 (258)
T ss_pred ccccCC-chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHccc--c-------
Confidence 754332 222345677999998765 3468899999999999999999644332222222111 111110 0
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
.+......+.+++.+||+.||++|||++++++.|+
T Consensus 224 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 224 ---LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ---CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 01111235789999999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=317.26 Aligned_cols=233 Identities=20% Similarity=0.269 Sum_probs=186.0
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHH-HhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQ-KIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~-~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|+. .+|+.||+|++..... ...++..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 3699999999999995 4789999999875321 2234455544 46789999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|.+++.. ...+++..+..++.||+.||.||| +++|+||||||+|||+++++.+||+|||++.... ...
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (323)
T cd05575 81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLH----SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTT 153 (323)
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcc
Confidence 999999853 346889999999999999999999 6799999999999999999999999999986422 122
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||++|+.||... +..+....+....... .+...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~------------~~~~~ 220 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-DTAEMYDNILNKPLRL------------KPNIS 220 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC-CHHHHHHHHHcCCCCC------------CCCCC
Confidence 3345788899999988888899999999999999999999999743 3333333333221110 01123
Q ss_pred HHHHHHHhhccCCCCCCCCCHH
Q 006903 583 LKLLQVALRCINQSPNERPSMN 604 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ 604 (626)
..+.+++.+|++.||++||++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 221 VSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHHHhhcCHHhCCCCC
Confidence 3578899999999999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=305.45 Aligned_cols=246 Identities=18% Similarity=0.289 Sum_probs=193.6
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||++.. .++..+|+|.+.... ...+++.+|+++++.++|+||+++++++...+..+++|||+
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 89 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYM 89 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecC
Confidence 47899999999999963 246689999887544 23467999999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCC------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEee
Q 006903 424 PNGSLFNLLHGSEN------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISE 491 (626)
Q Consensus 424 ~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~D 491 (626)
++|+|.++++.... ...+++..++.++.|++.|++||| +++|+||||||+|||+++++.+||+|
T Consensus 90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH----~~~i~H~dlkp~nil~~~~~~~kL~d 165 (280)
T cd05092 90 RHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA----SLHFVHRDLATRNCLVGQGLVVKIGD 165 (280)
T ss_pred CCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH----HCCeecccccHhhEEEcCCCCEEECC
Confidence 99999999964321 135889999999999999999999 67999999999999999999999999
Q ss_pred ccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccc
Q 006903 492 YGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTV 565 (626)
Q Consensus 492 FGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 565 (626)
||++....... .....+..|++||......++.++|||||||++|||++ |+.||..... .+.......... .
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~-~ 243 (280)
T cd05092 166 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN-TEAIECITQGRE-L 243 (280)
T ss_pred CCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH-HHHHHHHHcCcc-C
Confidence 99986432211 11123456899998887888999999999999999999 8888864322 222222211111 0
Q ss_pred ccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 566 EVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 566 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
. .+...+..+.+++.+||+.||++||++.||.+.|+.
T Consensus 244 ~----------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 244 E----------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred C----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 0 011223457889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=312.38 Aligned_cols=237 Identities=22% Similarity=0.332 Sum_probs=187.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHH---hccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQK---IDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~---l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .+++.||||.++... ...+.+.+|+++ ++.++||||+++++++...+..|+||||
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~ 83 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEY 83 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcC
Confidence 36799999999999985 568999999997542 122456666655 4677899999999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN--- 499 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~--- 499 (626)
+++|+|..+++. ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH----~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 84 AAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLH----ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred CCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH----hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence 999999988853 46899999999999999999999 6799999999999999999999999999976422
Q ss_pred CCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 500 HDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 500 ~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
.......++..|++||......++.++|||||||++|||++|+.||... +..+....+...... .+.
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~-~~~~~~~~i~~~~~~------------~p~ 222 (324)
T cd05589 156 DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD-DEEEVFDSIVNDEVR------------YPR 222 (324)
T ss_pred CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCC------------CCC
Confidence 1223345788899999988888899999999999999999999998743 223333333222111 111
Q ss_pred HHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
.....+.+++.+||+.||++|| ++.++++
T Consensus 223 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 223 FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 1233477899999999999999 4666654
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=303.62 Aligned_cols=247 Identities=21% Similarity=0.275 Sum_probs=186.3
Q ss_pred ccccCCCcceEEEEeC---CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 353 LLGRGKHGSLYRVVLD---DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.||+|+||.||+|... ++..+|+|.++.... ....+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 5899999999999854 346799999876542 23478899999999999999999999998889999999999999
Q ss_pred hhHhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 428 LFNLLHGSEN--GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 428 L~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|.++++.... ....++..++.++.|++.|++||| +.+++||||||+||+++.++.+|++|||++.......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH----KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH----HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999964322 235678888899999999999999 6799999999999999999999999999986432221
Q ss_pred --cccccccccchhhccccC-------CCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 503 --SFLAQTSSLKINDISNQM-------CSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~-------~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
....++..|++||..... .++.++|||||||++|||++ |+.||................ .....++..
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~ 235 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQ--QLKLPKPRL 235 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcc--cCCCCCCcc
Confidence 112345668999986532 34789999999999999996 999986543322221111111 111111111
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
. ......+.+++.+|| .+|++|||++||++.|+
T Consensus 236 ~-----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 236 K-----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred C-----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 0 011234677888999 58999999999998875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=307.92 Aligned_cols=251 Identities=19% Similarity=0.286 Sum_probs=197.8
Q ss_pred cccccccCCCcceEEEEe--------CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 350 PAELLGRGKHGSLYRVVL--------DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~--------~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
..+.||+|+||.||+|+. .++..||+|.+.... ....++.+|+.+++.+ +||||+++++++...+..++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 98 (304)
T cd05101 19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 98 (304)
T ss_pred ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEE
Confidence 347899999999999973 134579999987543 2235788999999999 89999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 419 VYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
||||+++|+|.+++..... ...++|..+..++.|++.||.||| ++||+||||||+||++++++
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH----~~givH~dlkp~Nili~~~~ 174 (304)
T cd05101 99 IVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA----SQKCIHRDLAARNVLVTENN 174 (304)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH----HCCeeecccccceEEEcCCC
Confidence 9999999999999964321 235789999999999999999999 67999999999999999999
Q ss_pred CeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 486 EPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
.+||+|||+++...... ....++..|++||......++.++||||||+++|||+| |..|+.. .+..++.....
T Consensus 175 ~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~-~~~~~~~~~~~ 253 (304)
T cd05101 175 VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLK 253 (304)
T ss_pred cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCccc-CCHHHHHHHHH
Confidence 99999999986543211 11223456899998877778999999999999999999 6777653 34444443332
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
... ... ........+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 254 ~~~-~~~----------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 254 EGH-RMD----------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred cCC-cCC----------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 221 111 0112334588899999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=321.91 Aligned_cols=243 Identities=19% Similarity=0.228 Sum_probs=188.1
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||+||+|+ ..+++.||||++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~g 85 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 85 (381)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCC
Confidence 3689999999999998 45689999999975432 224688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH----- 500 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~----- 500 (626)
|+|.+++.. ...+++.....++.|++.||.||| ..+|+||||||+|||++.++.+||+|||++.....
T Consensus 86 g~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH----~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 86 GDMMSLLIR---MEVFPEVLARFYIAELTLAIESVH----KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 999999963 346888999999999999999999 67999999999999999999999999998642100
Q ss_pred ---------------------------------------------CccccccccccchhhccccCCCCCcchhHHHHHHH
Q 006903 501 ---------------------------------------------DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVIL 535 (626)
Q Consensus 501 ---------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl 535 (626)
......++..|++||......++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 00123578899999998888889999999999999
Q ss_pred HHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHH
Q 006903 536 LELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALR--CINQSPNERPSMNQVAVM 609 (626)
Q Consensus 536 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~--Cl~~dP~~RPs~~ev~~~ 609 (626)
|||+||+.||......... ..+........... .......+.+++.+ |+..+|..||++.|++..
T Consensus 239 ~elltG~~Pf~~~~~~~~~-~~i~~~~~~~~~~~--------~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQ-LKVINWENTLHIPP--------QVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHhCCCCCcCCCHHHHH-HHHHccccccCCCC--------CCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9999999999754332221 12211110000000 00112235566666 667777779999999774
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=298.91 Aligned_cols=244 Identities=23% Similarity=0.338 Sum_probs=197.8
Q ss_pred cccccCCCcceEEEEeCC----CcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVLDD----GLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|.... +..||+|.++..... .+.+.+|++.++.++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998543 889999999865543 46889999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCC------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 426 GSLFNLLHGSEN------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 426 g~L~~~l~~~~~------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
++|.+++..... ...+++..+..++.+++.||+||| +++|+||||||+||+++.++.+|++|||.+....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA----SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH----cCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence 999999975311 367899999999999999999999 6899999999999999999999999999986543
Q ss_pred CC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHH
Q 006903 500 HD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 500 ~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
.. .....++..|++||......++.++||||+||++|||++ |..||... ...+......... ...
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~~~~~~~~~~-~~~------- 227 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL-SNEEVLEYLRKGY-RLP------- 227 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHcCC-CCC-------
Confidence 32 222345667899998877788999999999999999999 58888644 2233333322211 110
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
.+......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 228 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 ---KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11122446889999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-36 Score=307.83 Aligned_cols=248 Identities=20% Similarity=0.314 Sum_probs=195.4
Q ss_pred cccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
..+.||+|+||.||++.. .++..||+|.++.... ..+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 39 ~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 118 (302)
T cd05055 39 FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVIT 118 (302)
T ss_pred EcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEE
Confidence 357899999999999973 2356899999876432 235688999999999 7999999999999999999999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++|+|.++++... ...+++.++..++.+++.||.||| +++|+||||||+|||++.++.++++|||+++....
T Consensus 119 e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 193 (302)
T cd05055 119 EYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLA----SKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMN 193 (302)
T ss_pred EcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH----HCCeehhhhccceEEEcCCCeEEECCCcccccccC
Confidence 9999999999996422 234899999999999999999999 67999999999999999999999999999865432
Q ss_pred Ccc-----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 501 DQS-----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 501 ~~~-----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
... ...++..|++||......++.++|||||||++|||+| |+.||......... ...........
T Consensus 194 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~-------- 264 (302)
T cd05055 194 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKF-YKLIKEGYRMA-------- 264 (302)
T ss_pred CCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHH-HHHHHcCCcCC--------
Confidence 211 1223456999998877778999999999999999998 88888643322221 12222111110
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
........+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 265 --~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 265 --QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred --CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0011123588899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=299.78 Aligned_cols=245 Identities=23% Similarity=0.372 Sum_probs=199.5
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...+++.||||.+.......+++.+|++++++++||||+++++++......++||||+++++|.+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 90 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLD 90 (261)
T ss_pred eeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHH
Confidence 47899999999999998888899999998766777889999999999999999999999998889999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
++... .+..+++..+..++.+++.|+.||| +++|+|+||||+||++++++.+|++|||++....... ....
T Consensus 91 ~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh----~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 165 (261)
T cd05034 91 FLKSG-EGKKLRLPQLVDMAAQIAEGMAYLE----SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAK 165 (261)
T ss_pred HHhcc-ccCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccC
Confidence 99752 2356899999999999999999999 6799999999999999999999999999976543211 1112
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.+..|++||.......+.++|||||||++||++| |+.||.... ............... .+...+..+
T Consensus 166 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~ 233 (261)
T cd05034 166 FPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT-NREVLEQVERGYRMP-----------RPPNCPEEL 233 (261)
T ss_pred CCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCC-----------CCCCCCHHH
Confidence 3456899998877778999999999999999999 888886432 222222222211000 011123458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
.+++.+|++.+|++||+++++.+.|+.
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 234 YDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=329.70 Aligned_cols=243 Identities=20% Similarity=0.248 Sum_probs=194.3
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCC--------eEEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ--------EKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~--------~~~l 418 (626)
.+.||+|+||.||+|+ ..+|+.||||.+...... ...+.+|+..+..++|+||+++.+.+...+ ..++
T Consensus 37 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~l 116 (496)
T PTZ00283 37 SRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIAL 116 (496)
T ss_pred EEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEE
Confidence 4789999999999998 567999999998765433 245788999999999999999888765432 3679
Q ss_pred EEeecCCCChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 419 VYEYQPNGSLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
||||+++|+|.++++... ....+++..+..++.|++.||.|+| +++|+||||||+|||++.++.+||+|||+++.
T Consensus 117 V~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH----~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~ 192 (496)
T PTZ00283 117 VLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH----SKHMIHRDIKSANILLCSNGLVKLGDFGFSKM 192 (496)
T ss_pred EEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEeCCCCEEEEecccCee
Confidence 999999999999996422 2357899999999999999999999 67999999999999999999999999999865
Q ss_pred cCC-----CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 498 ENH-----DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 498 ~~~-----~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
... ......++..|++||......++.++|||||||++|||++|+.||... +..+.+..........
T Consensus 193 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-~~~~~~~~~~~~~~~~------- 264 (496)
T PTZ00283 193 YAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE-NMEEVMHKTLAGRYDP------- 264 (496)
T ss_pred ccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHhcCCCCC-------
Confidence 322 122345788999999998888899999999999999999999999643 3444444333221110
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+......+.+++.+||+.||++||++.+++.+
T Consensus 265 ----~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 265 ----LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ----CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 111223458889999999999999999999763
|
|
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=300.67 Aligned_cols=239 Identities=22% Similarity=0.311 Sum_probs=184.0
Q ss_pred cccccCCCcceEEEEeCC-------------CcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEE
Q 006903 352 ELLGRGKHGSLYRVVLDD-------------GLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKL 417 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~-------------g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~ 417 (626)
+.||+|+||.||+|.+.+ ...||+|.+..... ....+.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 23589998765432 3356888999999999999999999999989999
Q ss_pred EEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC-------eEEe
Q 006903 418 LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME-------PCIS 490 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~-------~kl~ 490 (626)
+||||+++|+|..+++. ....+++..+++++.|++.||+||| +++|+||||||+|||++.++. ++++
T Consensus 81 lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 81 MVEEFVEFGPLDLFMHR--KSDVLTTPWKFKVAKQLASALSYLE----DKDLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEecccCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhh----hCCeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 99999999999998863 2346899999999999999999999 689999999999999987664 8999
Q ss_pred eccCccccCCCccccccccccchhhccc-cCCCCCcchhHHHHHHHHHHH-cCCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 491 EYGLIVTENHDQSFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELL-TGKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 491 DFGl~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
|||++....... ...++..|++||... ...++.++|||||||++|||+ +|+.|+... ...+. ......... .
T Consensus 155 d~g~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~-~~~~~-~~~~~~~~~--~- 228 (262)
T cd05077 155 DPGIPITVLSRQ-ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK-TLAEK-ERFYEGQCM--L- 228 (262)
T ss_pred CCCCCccccCcc-cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc-chhHH-HHHHhcCcc--C-
Confidence 999976543222 233566799999775 456788999999999999998 577776532 21111 111111100 0
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
.......+.+++.+||+.||++||++.+|++.|+
T Consensus 229 ---------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 229 ---------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred ---------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 0011235788999999999999999999988763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=299.06 Aligned_cols=250 Identities=18% Similarity=0.316 Sum_probs=200.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +|+.||+|.++... ...+.+.+|++++++++|+||+++++++...+..++||||+++
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADA 86 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCC
Confidence 467999999999999965 79999999886432 2245788999999999999999999999999999999999999
Q ss_pred CChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 426 GSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 426 g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
|+|.+++... .....+++..++.++.+++.||.||| +.+|+||||||+||+++.++.++++|||++......
T Consensus 87 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~ 162 (267)
T cd08224 87 GDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH----SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred CCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH----hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcc
Confidence 9999998642 22356899999999999999999999 679999999999999999999999999997643221
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCC-cchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNG-FNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
.....++..|.+||......++.++|||||||++|||++|+.|+... .+..+.......... ... ....
T Consensus 163 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~ 232 (267)
T cd08224 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY-PPL---------PADH 232 (267)
T ss_pred cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC-CCC---------Chhh
Confidence 12234567789999887777889999999999999999999998643 233233222221111 000 0112
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
....+.+++.+||+.+|++|||+.+|+++|+++.
T Consensus 233 ~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 233 YSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred cCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 3345888999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-36 Score=302.39 Aligned_cols=247 Identities=23% Similarity=0.287 Sum_probs=183.7
Q ss_pred ccccCCCcceEEEEeCC---CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 353 LLGRGKHGSLYRVVLDD---GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~~~---g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.||+|+||.||+|...+ ...+|+|.+..... ....+.+|++.++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997433 45789998765432 23468899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 428 LFNLLHGSEN--GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 428 L~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|.+++..... ....++...+.++.|++.||+||| +++|+||||||+|||+++++.+||+|||++.......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH----QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH----hcCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 9999965332 234567888999999999999999 6799999999999999999999999999976432211
Q ss_pred --cccccccccchhhccc-------cCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 503 --SFLAQTSSLKINDISN-------QMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~-------~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
....++..|++||... ...++.++|||||||++|||++ |..||....+.. .......... .....+.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~- 234 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQD-IKLPKPQ- 234 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhccC-ccCCCCc-
Confidence 1122345689999753 2345789999999999999999 677776433222 2222222111 1111111
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
........+.+++..|| .||++|||++||++.|.
T Consensus 235 ----~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 235 ----LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ----ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11122334667788898 59999999999998873
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=302.95 Aligned_cols=248 Identities=18% Similarity=0.261 Sum_probs=193.6
Q ss_pred ccccccCCCcceEEEE-eCCCc----EEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVV-LDDGL----MLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~----~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|. ..+++ .||+|.++.... ..+++.+|+.+++.++||||+++++++.. ...+++|||+
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~ 90 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLM 90 (279)
T ss_pred eeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcC
Confidence 3789999999999998 44554 489999875432 24578899999999999999999998865 4578999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS 503 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~ 503 (626)
++|+|.++++.. ...+++..++.++.|++.||+||| +++|+||||||+|||+++++.+||+|||+++.......
T Consensus 91 ~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH----~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~ 164 (279)
T cd05109 91 PYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLE----EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 164 (279)
T ss_pred CCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccccceEEEcCCCcEEECCCCceeecccccc
Confidence 999999999642 346899999999999999999999 68999999999999999999999999999865432211
Q ss_pred -----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 504 -----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 504 -----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....+..|++||......++.++|||||||++|||+| |..||.... ....... ........ .
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~-~~~~~~~~----------~ 232 (279)
T cd05109 165 EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP-AREIPDL-LEKGERLP----------Q 232 (279)
T ss_pred eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHH-HHCCCcCC----------C
Confidence 1123456899998877778999999999999999998 888876432 1111111 11111100 0
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.......+.+++.+||+.||++||++.++++.|+++....
T Consensus 233 ~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 233 PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 1122345788999999999999999999999999886554
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=317.17 Aligned_cols=236 Identities=19% Similarity=0.246 Sum_probs=187.0
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHH-HhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQ-KIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~-~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|+. .+|+.||+|++.... .....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 3699999999999984 578999999986532 12234555554 46789999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|..++.. ...+++..+..++.||+.||.||| +.||+||||||+|||+++++.+||+|||+++... ...
T Consensus 81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH----~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~ 153 (325)
T cd05604 81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLH----SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTT 153 (325)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCc
Confidence 999998853 346899999999999999999999 6799999999999999999999999999986421 122
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||++|+.||... +..+........... . .+...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~-~~~~~~~~~~~~~~~---~---------~~~~~ 220 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR-DVAEMYDNILHKPLV---L---------RPGAS 220 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC-CHHHHHHHHHcCCcc---C---------CCCCC
Confidence 3345788899999988888899999999999999999999999743 333333333322110 0 01122
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVA 607 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~ 607 (626)
..+.+++.+|++.+|++||++++.+
T Consensus 221 ~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 221 LTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred HHHHHHHHHHhccCHHhcCCCCCCH
Confidence 3477889999999999999886433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=315.33 Aligned_cols=233 Identities=18% Similarity=0.262 Sum_probs=184.8
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHH-HhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQ-KIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~-~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
++||+|+||.||+|+. .+++.||+|.+.... .....+.+|+. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999995 468999999986532 12234555554 57889999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|.+++.. ...++......++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++... ...
T Consensus 81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (321)
T cd05603 81 GELFFHLQR---ERCFLEPRARFYAAEVASAIGYLH----SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETT 153 (321)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcc
Confidence 999988853 346788889999999999999999 6799999999999999999999999999976421 112
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||++|+.||... +.......+...... .+....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~i~~~~~~------------~~~~~~ 220 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR-DVSQMYDNILHKPLQ------------LPGGKT 220 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC-CHHHHHHHHhcCCCC------------CCCCCC
Confidence 3345788899999988888899999999999999999999999743 333333333222110 111123
Q ss_pred HHHHHHHhhccCCCCCCCCCHH
Q 006903 583 LKLLQVALRCINQSPNERPSMN 604 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ 604 (626)
..+.+++.+|++.||++||++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 221 VAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHHHccCCHhhcCCCC
Confidence 3578899999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=298.39 Aligned_cols=242 Identities=20% Similarity=0.314 Sum_probs=196.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||++...++..+|+|.+........++.+|++++++++||||+++++++......++||||+++|+|.+
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 88 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSD 88 (256)
T ss_pred EeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHH
Confidence 37899999999999997778899999998766667889999999999999999999999999899999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----ccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS----FLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~----~~~ 506 (626)
++... ...+++..+..++.+++.|++||| +.+++||||||+||+++.++.+||+|||++........ ...
T Consensus 89 ~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 162 (256)
T cd05112 89 YLRAQ--RGKFSQETLLGMCLDVCEGMAYLE----SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTK 162 (256)
T ss_pred HHHhC--ccCCCHHHHHHHHHHHHHHHHHHH----HCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCc
Confidence 99642 246889999999999999999999 67999999999999999999999999999764322211 112
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.+..|++||......++.++||||||+++|||++ |+.||.... .............. ..+ ......+
T Consensus 163 ~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~---~~~--------~~~~~~~ 230 (256)
T cd05112 163 FPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-NSEVVETINAGFRL---YKP--------RLASQSV 230 (256)
T ss_pred cchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-HHHHHHHHhCCCCC---CCC--------CCCCHHH
Confidence 3456899998877778899999999999999998 888886432 22233222211100 111 0112458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
.+++.+||+.+|++||++.|+++.|
T Consensus 231 ~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 231 YELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHHHHHcccChhhCCCHHHHHHhh
Confidence 8899999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=308.22 Aligned_cols=251 Identities=19% Similarity=0.264 Sum_probs=196.8
Q ss_pred cccccccCCCcceEEEEeC--------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 350 PAELLGRGKHGSLYRVVLD--------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~--------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
..+.||+|+||.||++... ++..+|+|.++.... ...++.+|+++++++ +||||+++++++...+..++
T Consensus 22 i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (307)
T cd05098 22 LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 101 (307)
T ss_pred EeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 3578999999999999742 235799999975432 234688899999999 79999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 419 VYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
||||+++|+|.+++..... ...++|..+++++.|++.||+||| +++++||||||+||+++.++
T Consensus 102 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH----~~gi~H~dlkp~Nill~~~~ 177 (307)
T cd05098 102 IVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA----SKKCIHRDLAARNVLVTEDN 177 (307)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH----HCCcccccccHHheEEcCCC
Confidence 9999999999999964321 235899999999999999999999 67999999999999999999
Q ss_pred CeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 486 EPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
.+|++|||++....... .....+..|++||......++.++|||||||++|||++ |+.||.. .+..+......
T Consensus 178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~-~~~~~~~~~~~ 256 (307)
T cd05098 178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 256 (307)
T ss_pred cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCc-CCHHHHHHHHH
Confidence 99999999986432211 11122356899998877778999999999999999998 7777753 33333333222
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
. ....+ .+......+.+++.+||+.+|++|||+.+|++.|+++...
T Consensus 257 ~-~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 257 E-GHRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred c-CCCCC----------CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1 11111 1112234578899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=320.33 Aligned_cols=242 Identities=19% Similarity=0.278 Sum_probs=194.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +++.||||+++... .....+.+|++++..++||||+++++++.+++..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPG 85 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCC
Confidence 478999999999999954 78999999987543 2335688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++... ..+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||++.......
T Consensus 86 ~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH----~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 86 GDLMNLLIRK---DVFPEETARFYIAELVLALDSVH----KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 9999999642 56899999999999999999999 6899999999999999999999999999986433221
Q ss_pred -----------------------------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhH
Q 006903 503 -----------------------------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLAT 553 (626)
Q Consensus 503 -----------------------------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~ 553 (626)
....++..|++||......++.++|||||||++|||++|+.||...... +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~-~ 237 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ-E 237 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH-H
Confidence 2235678899999988888899999999999999999999999754422 2
Q ss_pred HHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHH
Q 006903 554 WVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPS-MNQVAVM 609 (626)
Q Consensus 554 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~ev~~~ 609 (626)
....+......... + ........+.+++.+|+. ||.+||+ ++|+++.
T Consensus 238 ~~~~i~~~~~~~~~--p------~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 238 TYNKIINWKESLRF--P------PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHHHhccCCcccC--C------CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 22222221000000 0 000123457788899997 9999999 9999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=313.92 Aligned_cols=237 Identities=18% Similarity=0.228 Sum_probs=186.4
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHH-HhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQ-KIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~-~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|+. .+++.||+|.+.... .....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 3699999999999985 467899999986532 12234444444 46789999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|.+++.. ...++......++.|++.||.||| +.||+||||||+|||++.++.+||+|||+++... ...
T Consensus 81 ~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH----~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~ 153 (325)
T cd05602 81 GELFYHLQR---ERCFLEPRARFYAAEIASALGYLH----SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTT 153 (325)
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCc
Confidence 999999963 345778888899999999999999 6899999999999999999999999999986422 122
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||++|+.||... +..+....+...... ..+...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~i~~~~~~------------~~~~~~ 220 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-NTAEMYDNILNKPLQ------------LKPNIT 220 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCC-CHHHHHHHHHhCCcC------------CCCCCC
Confidence 3345788999999988888899999999999999999999999743 333333333222111 011123
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+|++.||.+||++.+.+.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 221 NSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred HHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 34778889999999999999875443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=297.74 Aligned_cols=242 Identities=20% Similarity=0.283 Sum_probs=195.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+++.||+|.+.... ...+++.+|++++++++||||+++++++...+..++||||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENG 84 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCC
Confidence 36799999999999985 468999999986543 23467889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---S 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~ 503 (626)
+|.++++.. ....+++..+..++.+++.||.||| +.+|+||||||+||++++++.++++|||++....... .
T Consensus 85 ~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH----~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 85 DLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLH----SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred cHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 999999753 2457899999999999999999999 6799999999999999999999999999976533221 2
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...++..|++||......++.++|||||||++|||+||+.||.... ..+......... ... .......
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~-~~~----------~~~~~~~ 227 (256)
T cd08529 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN-QGALILKIIRGV-FPP----------VSQMYSQ 227 (256)
T ss_pred ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCC-CCC----------CccccCH
Confidence 2345678999999888888999999999999999999999986443 222222222211 100 1112334
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+.+++.+||+.+|++||++.++++.
T Consensus 228 ~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 228 QLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHHHHHHccCCcccCcCHHHHhhC
Confidence 58899999999999999999999763
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=300.67 Aligned_cols=245 Identities=21% Similarity=0.333 Sum_probs=193.8
Q ss_pred ccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|... ++..+|+|.++.... ..+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYME 88 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC
Confidence 478999999999999853 234799999875432 23578999999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccc
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF 504 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~ 504 (626)
+|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.++++|||++.........
T Consensus 89 ~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd05066 89 NGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLS----DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 162 (267)
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCEeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence 99999999642 346899999999999999999999 679999999999999999999999999998654322211
Q ss_pred ------cccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 505 ------LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 505 ------~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
...+..|++||......++.++|||||||++||+++ |+.||..... .+........ .... .
T Consensus 163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~-~~~~~~~~~~-~~~~----------~ 230 (267)
T cd05066 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN-QDVIKAIEEG-YRLP----------A 230 (267)
T ss_pred eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH-HHHHHHHhCC-CcCC----------C
Confidence 111346889998887778999999999999999887 9999864322 2222222211 1100 0
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
....+..+.+++.+||+.+|++||+|.++++.|+++
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 231 PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 111234578899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-36 Score=306.07 Aligned_cols=243 Identities=22% Similarity=0.245 Sum_probs=192.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++.. .+++.||+|++..... ....+.+|++++++++||||+++++.+..++..++||||+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 84 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCC
Confidence 36799999999999984 5789999999875432 224577899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--c
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--S 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~ 503 (626)
|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++....... .
T Consensus 85 ~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 159 (285)
T cd05605 85 GDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLH----RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIR 159 (285)
T ss_pred CcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHH----HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccc
Confidence 9999988642 2346899999999999999999999 6799999999999999999999999999986543221 2
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhH--HHHHHhhcccccccccHHHHhhhccHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLAT--WVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
...++..|++||......++.++|||||||++|||++|+.||........ .+....... . .......
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~ 228 (285)
T cd05605 160 GRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED-Q----------EEYSEKF 228 (285)
T ss_pred cccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc-c----------cccCccc
Confidence 23467789999998877889999999999999999999999974322111 111111110 0 0011223
Q ss_pred HHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERP-----SMNQVAVM 609 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~~ 609 (626)
...+.+++.+||+.||++|| +++++++.
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 229 SEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred CHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 34578899999999999999 78888653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=313.04 Aligned_cols=250 Identities=20% Similarity=0.293 Sum_probs=192.0
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCCCC--HHHHHHHHHHhccC-CCCCccccceEEEeC-CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSIS--SEDFKNRMQKIDHV-KHPNVLPPLAYYCSK-QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~-~~~~lv~ 420 (626)
.+.||+|+||.||+|.. .+++.||||.++..... ...+.+|+.++.++ +||||+++++++... ...++||
T Consensus 12 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (343)
T cd05103 12 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (343)
T ss_pred cccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEE
Confidence 47899999999999973 35789999999764322 34688999999999 689999999988654 4578999
Q ss_pred eecCCCChhHhhcCCCC---------------------------------------------------------------
Q 006903 421 EYQPNGSLFNLLHGSEN--------------------------------------------------------------- 437 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~--------------------------------------------------------------- 437 (626)
||+++|+|.++++....
T Consensus 92 ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (343)
T cd05103 92 EFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDL 171 (343)
T ss_pred eccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhh
Confidence 99999999999864210
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc-----cccccccc
Q 006903 438 -GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS-----FLAQTSSL 511 (626)
Q Consensus 438 -~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~-----~~~~~~~~ 511 (626)
...++|..+..++.|++.||+||| +++|+||||||+|||++.++.+|++|||++........ ...++..|
T Consensus 172 ~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y 247 (343)
T cd05103 172 YKKVLTLEDLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 247 (343)
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcce
Confidence 124788899999999999999999 68999999999999999999999999999865322111 11234568
Q ss_pred chhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHh
Q 006903 512 KINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVAL 590 (626)
Q Consensus 512 ~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~ 590 (626)
++||......++.++|||||||++|||++ |..|+............. ........ +......+.+++.
T Consensus 248 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~~~~~ 316 (343)
T cd05103 248 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRA----------PDYTTPEMYQTML 316 (343)
T ss_pred ECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHH-hccCCCCC----------CCCCCHHHHHHHH
Confidence 99998877788999999999999999997 888876432222222211 11111110 0011235788999
Q ss_pred hccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 591 RCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 591 ~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
+||+.+|++|||+.||++.|+.+..
T Consensus 317 ~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 317 DCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=303.37 Aligned_cols=246 Identities=19% Similarity=0.255 Sum_probs=192.2
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... .+..||+|.+..... ...+|.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 90 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLEL 90 (277)
T ss_pred eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEec
Confidence 368999999999999864 467899998875432 235689999999999999999999999998899999999
Q ss_pred cCCCChhHhhcCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC---CeEEeeccCc
Q 006903 423 QPNGSLFNLLHGSEN----GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM---EPCISEYGLI 495 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGl~ 495 (626)
+++|+|.+++..... ...++|..+++++.||+.||+||| +++++||||||+||+++.++ .+|++|||++
T Consensus 91 ~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~ 166 (277)
T cd05036 91 MAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE----ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA 166 (277)
T ss_pred CCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccchheEEEeccCCCcceEeccCccc
Confidence 999999999964321 135899999999999999999999 67999999999999998754 5899999998
Q ss_pred cccCCCcc-----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 496 VTENHDQS-----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 496 ~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
+....... ....+..|++||......++.++|||||||++|||++ |..||.... ..+.......... ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~-~~~~~~~~~~~~~-~~--- 241 (277)
T cd05036 167 RDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT-NQEVMEFVTGGGR-LD--- 241 (277)
T ss_pred cccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCc-CC---
Confidence 75422111 1112346899999877788999999999999999997 888886432 2222222222111 00
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
.+......+.+++.+||+.+|++||++.+|++.|++
T Consensus 242 -------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 242 -------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred -------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 011223458889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=324.10 Aligned_cols=251 Identities=16% Similarity=0.219 Sum_probs=183.8
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeC--------CeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--------QEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--------~~~~lv~ 420 (626)
..+.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++|||||++++++... ...++||
T Consensus 70 ~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvm 146 (440)
T PTZ00036 70 LGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVM 146 (440)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEE
Confidence 357899999999999985 568999999885432 3455799999999999999999987542 2467999
Q ss_pred eecCCCChhHhhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCcccc
Q 006903 421 EYQPNGSLFNLLHG-SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTE 498 (626)
Q Consensus 421 Ey~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~ 498 (626)
||+++ +|.+++.. ......+++..+..++.|++.||+||| +.+|+||||||+|||++.++ .+||+|||+++..
T Consensus 147 E~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH----~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~ 221 (440)
T PTZ00036 147 EFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH----SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNL 221 (440)
T ss_pred ecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCcCHHHEEEcCCCCceeeeccccchhc
Confidence 99985 77776642 123457899999999999999999999 67999999999999999664 6999999998753
Q ss_pred CC--Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc-cc---------
Q 006903 499 NH--DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW-TV--------- 565 (626)
Q Consensus 499 ~~--~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~--------- 565 (626)
.. ......++..|++||.... ..++.++|||||||++|||+||++||.................. ..
T Consensus 222 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~ 301 (440)
T PTZ00036 222 LAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPN 301 (440)
T ss_pred cCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchh
Confidence 32 1223456788999998654 46899999999999999999999999754332222111110000 00
Q ss_pred --cc-c---cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 566 --EV-F---DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 566 --~~-~---d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+. + .+.-.....+......+.+++.+||+.||.+|||+.|+++
T Consensus 302 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 302 YADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred hhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00 0 0000000011112346889999999999999999999985
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=304.39 Aligned_cols=246 Identities=22% Similarity=0.313 Sum_probs=194.0
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... ++..||+|.+..... ..+++.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 89 (288)
T cd05050 10 VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEY 89 (288)
T ss_pred cccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEec
Confidence 368999999999999853 468899999875432 235688999999999999999999999998999999999
Q ss_pred cCCCChhHhhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC
Q 006903 423 QPNGSLFNLLHGSE-------------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN 483 (626)
Q Consensus 423 ~~~g~L~~~l~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~ 483 (626)
+++|+|.+++.... ....+++..++.++.+++.||+||| .++++||||||+||++++
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH----~~~i~H~dl~p~nil~~~ 165 (288)
T cd05050 90 MAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS----ERKFVHRDLATRNCLVGE 165 (288)
T ss_pred CCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hCCeecccccHhheEecC
Confidence 99999999996321 1135788999999999999999999 679999999999999999
Q ss_pred CCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHH
Q 006903 484 NMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHS 557 (626)
Q Consensus 484 ~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~ 557 (626)
++.++++|||++....... .....+..|++||......++.++|||||||++|||++ |..||.. ....+....
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~-~~~~~~~~~ 244 (288)
T cd05050 166 NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG-MAHEEVIYY 244 (288)
T ss_pred CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHH
Confidence 9999999999976432211 11123446899998877788999999999999999998 7777753 233333333
Q ss_pred HhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 558 VVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 558 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
....... . .+......+.+++.+||+.+|++|||+.|+++.|++
T Consensus 245 ~~~~~~~-~----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 245 VRDGNVL-S----------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HhcCCCC-C----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 2222110 0 111223468899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=317.37 Aligned_cols=242 Identities=18% Similarity=0.274 Sum_probs=191.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++.. .+++.||+|+++.... ..+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPG 85 (330)
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCC
Confidence 47899999999999984 5789999999975432 334678999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++... ...+++.....++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 86 ~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH----~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 86 GDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVH----QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 9999999642 246899999999999999999999 6799999999999999999999999999986543222
Q ss_pred -cccccccccchhhccc------cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 503 -SFLAQTSSLKINDISN------QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~------~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
....++..|++||... ...++.++|||||||++|||+||+.||...... .....+..........+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~------ 232 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-KTYNNIMNFQRFLKFPE------ 232 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-HHHHHHHcCCCccCCCC------
Confidence 1235678899999875 345678999999999999999999999755432 22333322211111100
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+|++ +|++||++.++++
T Consensus 233 --~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 233 --DPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred --CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 01122347788889997 9999999999875
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=301.43 Aligned_cols=241 Identities=18% Similarity=0.327 Sum_probs=189.8
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeC------CeEEEEEeec
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSK------QEKLLVYEYQ 423 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~------~~~~lv~Ey~ 423 (626)
+.||+|+||.||+|.. .+++.||+|.+.........+.+|+.++.++ +||||+++++++... ...++||||+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~ 91 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFC 91 (272)
T ss_pred HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcC
Confidence 6799999999999985 4689999999976656667889999999998 699999999998753 4589999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--- 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--- 500 (626)
++|+|.+++... ....+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||++.....
T Consensus 92 ~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH----~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~ 166 (272)
T cd06637 92 GAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLH----QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 166 (272)
T ss_pred CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHEEECCCCCEEEccCCCceecccccc
Confidence 999999999742 2346899999999999999999999 67999999999999999999999999999865322
Q ss_pred Cccccccccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 501 DQSFLAQTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
......++..|++||... ...++.++|||||||++|||++|+.||........... ..... ....
T Consensus 167 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~-~~~~~-~~~~-------- 236 (272)
T cd06637 167 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL-IPRNP-APRL-------- 236 (272)
T ss_pred cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH-HhcCC-CCCC--------
Confidence 122345677899999864 33567899999999999999999999864332222211 11110 0000
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
........+.+++.+||+.+|.+|||+.|+++
T Consensus 237 -~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 237 -KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred -CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 01112345788999999999999999999975
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=314.11 Aligned_cols=234 Identities=19% Similarity=0.276 Sum_probs=185.7
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|.. .+++.||+|+++.... ..+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 3699999999999985 5688999999976432 224577899988887 699999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|.+++.. ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++... ...
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (327)
T cd05617 81 GDLMFHMQR---QRKLPEEHARFYAAEICIALNFLH----ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT 153 (327)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCce
Confidence 999998853 346899999999999999999999 6799999999999999999999999999986421 122
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCC-----cchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNG-----FNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~-----~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|++||......++.++|||||||++|||+||+.||... ....++.......... . .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~----------~ 222 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI-R----------I 222 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC-C----------C
Confidence 3345788999999988888899999999999999999999999521 1122222222211100 0 1
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCH
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
+......+.+++.+||+.||++||++
T Consensus 223 p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 223 PRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 11122346788999999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=311.25 Aligned_cols=233 Identities=17% Similarity=0.211 Sum_probs=185.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCC-CccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHP-NVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~-nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|.. .+++.||||+++... ...+.+..|++++..++|+ +|+++++++...+..|+||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCC
Confidence 36899999999999985 457899999987532 2335678899999998765 58888888888999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~ 501 (626)
+|+|.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||++.... ..
T Consensus 85 ~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 85 GGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence 9999999853 346889999999999999999999 6799999999999999999999999999976421 12
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....++..|++||......++.++|||||||++|||+||+.||.... ..+....+...... .+...
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-~~~~~~~i~~~~~~------------~~~~~ 224 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-EDELFQSIMEHNVS------------YPKSL 224 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCC------------CCCCC
Confidence 223457889999999888888999999999999999999999997432 22223333221110 01112
Q ss_pred HHHHHHHHhhccCCCCCCCCCH
Q 006903 582 MLKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
...+.+++.+||+.||++||+.
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 225 SKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CHHHHHHHHHHhhcCHHHcCCC
Confidence 2347789999999999999986
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-36 Score=303.34 Aligned_cols=238 Identities=19% Similarity=0.233 Sum_probs=182.1
Q ss_pred ccccCCCcceEEEEeCC-------------------------CcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCcccc
Q 006903 353 LLGRGKHGSLYRVVLDD-------------------------GLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPP 406 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~~~-------------------------g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l 406 (626)
.||+|+||.||+|.+.. ...||+|.+..... ....+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999997421 24589998865432 23568889999999999999999
Q ss_pred ceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-
Q 006903 407 LAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM- 485 (626)
Q Consensus 407 ~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~- 485 (626)
++++...+..++||||+++|+|..++.. ....+++..++.++.|+++||+||| +++|+||||||+|||+++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH----~~~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK--EKGRVPVAWKITVAQQLASALSYLE----DKNLVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----cCCccCCCCCcccEEEeccCc
Confidence 9999999999999999999999999863 2346889999999999999999999 67999999999999998643
Q ss_pred ------CeEEeeccCccccCCCccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHH-cCCCCCCCCcchhHHHHH
Q 006903 486 ------EPCISEYGLIVTENHDQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELL-TGKLVQNNGFNLATWVHS 557 (626)
Q Consensus 486 ------~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~ell-tg~~p~~~~~~~~~~~~~ 557 (626)
.+|++|||++....... ...++..|++||.... ..++.++|||||||++|||+ +|+.|+...... +. ..
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~~-~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~-~~ 232 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSRE-ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS-EK-ER 232 (274)
T ss_pred ccCccceeeecCCcccccccccc-ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH-HH-HH
Confidence 37999999875432221 2235567899997654 45789999999999999995 688888643221 11 11
Q ss_pred HhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 558 VVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 558 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
....... .+......+.+++.+||+.+|++|||+.+|++.|.
T Consensus 233 ~~~~~~~------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 233 FYEKKHR------------LPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHhccC------------CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1111100 00111235788999999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=314.01 Aligned_cols=239 Identities=18% Similarity=0.245 Sum_probs=187.6
Q ss_pred ccccccCCCcceEEEEe----CCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||.||+++. .+++.||+|.+.... ...+.+.+|+++++++ +||||+++++++..++..++||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLIL 84 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEE
Confidence 47899999999999874 368899999986432 2235678899999999 4999999999999999999999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 85 e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 85 DYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLH----KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence 99999999999963 346899999999999999999999 67999999999999999999999999999864321
Q ss_pred ----CccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCc--chh-HHHHHHhhcccccccccHHH
Q 006903 501 ----DQSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGF--NLA-TWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 501 ----~~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~--~~~-~~~~~~~~~~~~~~~~d~~~ 572 (626)
......++..|++||..... .++.++|||||||++|||+||+.||.... ... ...........
T Consensus 158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--------- 228 (332)
T cd05614 158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP--------- 228 (332)
T ss_pred cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC---------
Confidence 11234578899999987654 46889999999999999999999986321 111 11122211110
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
..+......+.+++.+||+.||++|| +++++++
T Consensus 229 ---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 229 ---PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 01111233477889999999999999 6777765
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=303.55 Aligned_cols=249 Identities=16% Similarity=0.223 Sum_probs=193.6
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... .+..||+|.+...... ...+.+|+..+++++||||+++++++...+..++||||
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 90 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMEL 90 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeC
Confidence 378999999999998743 2458999998754422 24678899999999999999999999988999999999
Q ss_pred cCCCChhHhhcCCCC-------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 423 QPNGSLFNLLHGSEN-------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
+++|+|.++++.... ...+++..+..++.|++.||.||| +++|+||||||+||++++++.+|++|||++
T Consensus 91 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dikp~nili~~~~~~~L~Dfg~~ 166 (288)
T cd05061 91 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMT 166 (288)
T ss_pred CCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCCcCCCCChheEEEcCCCcEEECcCCcc
Confidence 999999999964221 234577888999999999999999 689999999999999999999999999998
Q ss_pred cccCCCcc-----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 496 VTENHDQS-----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 496 ~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
+....... ...++..|++||......++.++|||||||++|||++ |+.||.. ....+............
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~-~~~~~~~~~~~~~~~~~---- 241 (288)
T cd05061 167 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG-LSNEQVLKFVMDGGYLD---- 241 (288)
T ss_pred ccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCCCC----
Confidence 64322111 1123456899998877778999999999999999999 6777753 23333333222221110
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
........+.+++.+||+.||++|||+.++++.|++...
T Consensus 242 -------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 280 (288)
T cd05061 242 -------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 280 (288)
T ss_pred -------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence 011223468899999999999999999999999987543
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=316.20 Aligned_cols=243 Identities=20% Similarity=0.242 Sum_probs=186.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||+||+|.. .+++.||+|+++.... ....+.+|+.++.+++||||+++++.+.+.+..++||||+++
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~g 85 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPG 85 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCC
Confidence 37899999999999984 5689999999975431 224678899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---- 501 (626)
|+|.+++.. ...+++.....++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH----~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 86 GDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIH----QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999963 346899999999999999999999 689999999999999999999999999997542110
Q ss_pred ----------------------------------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCC
Q 006903 502 ----------------------------------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNN 547 (626)
Q Consensus 502 ----------------------------------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~ 547 (626)
.....|+..|++||......++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 0123578889999998888889999999999999999999999975
Q ss_pred CcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHH
Q 006903 548 GFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALR--CINQSPNERPSMNQVAVM 609 (626)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~--Cl~~dP~~RPs~~ev~~~ 609 (626)
... .+....+......... .+. ...++ .+.+++.+ |...++..||+++|+++.
T Consensus 239 ~~~-~~~~~~i~~~~~~~~~-p~~---~~~s~----~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 239 ETP-QETYKKVMNWKETLIF-PPE---VPISE----KAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCH-HHHHHHHHcCcCcccC-CCc---CCCCH----HHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 432 2333333221111110 000 01122 24444444 333344567999999875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=299.66 Aligned_cols=241 Identities=18% Similarity=0.212 Sum_probs=192.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||++.. .+++.||+|.+..... ..+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 86 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYM 86 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEEC
Confidence 47899999999999984 5689999999864331 1246888999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++++|.+++.. ...+++.....++.+++.||.||| +.+|+||||||+||++++++.++|+|||+++......
T Consensus 87 ~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 87 PGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLH----SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred CCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999863 245888999999999999999999 6799999999999999999999999999976432111
Q ss_pred -----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 -----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 -----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|++||......++.++||||||+++|||++|+.||......... ........... .
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~----------~ 228 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI-FKIATQPTNPQ----------L 228 (263)
T ss_pred ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH-HHHhccCCCCC----------C
Confidence 1234567899999988877899999999999999999999998754333222 12211111110 1
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+......+.+++.+||..+|++|||+.|+++.
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 229 PSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11223357889999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=300.13 Aligned_cols=245 Identities=20% Similarity=0.358 Sum_probs=193.4
Q ss_pred ccccccCCCcceEEEEeC-CC---cEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DG---LMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g---~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|... ++ ..||||.+..... ..++|..|+.+++.++||||+++++++......++||||++
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFME 88 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCC
Confidence 478999999999999854 33 3699999875432 23579999999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc-
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS- 503 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~- 503 (626)
+|+|.+++... ...+++..++.++.|++.||.||| +++++||||||+||+++.++.+|++|||++........
T Consensus 89 ~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH----~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 162 (269)
T cd05065 89 NGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLS----EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 162 (269)
T ss_pred CCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence 99999999642 346899999999999999999999 67999999999999999999999999998764322111
Q ss_pred --c---cc--cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 504 --F---LA--QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 504 --~---~~--~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
. .. .+..|++||......++.++|||||||++||+++ |..||.... ..+....+... ....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~-~~~~~~~i~~~-~~~~--------- 231 (269)
T cd05065 163 PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-NQDVINAIEQD-YRLP--------- 231 (269)
T ss_pred cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC-HHHHHHHHHcC-CcCC---------
Confidence 1 11 1235889999887788999999999999999887 998986432 22222222111 1100
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
...+.+..+.+++.+||+.+|++||++++++..|+++
T Consensus 232 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 232 -PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1112334578899999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=306.49 Aligned_cols=250 Identities=18% Similarity=0.297 Sum_probs=196.1
Q ss_pred cccccccCCCcceEEEEeC--------CCcEEEEEEcCCCCCC--HHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 350 PAELLGRGKHGSLYRVVLD--------DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~--------~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
..+.||+|+||.||++... ....+|+|.++..... ..++.+|+++++++ +||||+++++++...+..++
T Consensus 16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (314)
T cd05099 16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYV 95 (314)
T ss_pred eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEE
Confidence 3588999999999999731 2457999998754322 34688999999999 69999999999998889999
Q ss_pred EEeecCCCChhHhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 419 VYEYQPNGSLFNLLHGSE-------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
+|||+++|+|.+++.... ....++|..+++++.|++.||.||| ++||+||||||+|||+++++
T Consensus 96 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH----~~gi~H~dlkp~Nill~~~~ 171 (314)
T cd05099 96 IVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE----SRRCIHRDLAARNVLVTEDN 171 (314)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH----HCCeeeccccceeEEEcCCC
Confidence 999999999999996422 1245899999999999999999999 67999999999999999999
Q ss_pred CeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 486 EPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
.+|++|||+++...... .....+..|++||......++.++|||||||++|||++ |+.||.. .+..+......
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~-~~~~~~~~~~~ 250 (314)
T cd05099 172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPG-IPVEELFKLLR 250 (314)
T ss_pred cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHH
Confidence 99999999986543211 11122346899998877788999999999999999999 7888753 33333333222
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
.. ...+ ........+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 251 ~~-~~~~----------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 251 EG-HRMD----------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred cC-CCCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 21 1111 111223357789999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=282.87 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=194.8
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeC-----CeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK-----QEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lv~Ey~ 423 (626)
.+.+|+|||..||.++ ..+++.+|+|++.... ...+...+|++..++++|||+++++++...+ .+.||+++|.
T Consensus 26 ~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy 105 (302)
T KOG2345|consen 26 QRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYY 105 (302)
T ss_pred eeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehh
Confidence 4789999999999998 7889999999998766 4567789999999999999999999986543 3589999999
Q ss_pred CCCChhHhhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 424 PNGSLFNLLHGSEN-GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 424 ~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
..|+|.+.+...+. +..++..+.+.|+.+|++||.+||+. .+..+||||||.|||+.+.+.+++.|||.+....-.
T Consensus 106 ~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~--~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i 183 (302)
T KOG2345|consen 106 KRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK--EPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQI 183 (302)
T ss_pred ccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc--CCcccccCCCcceeEecCCCceEEEeccCccccceEe
Confidence 99999999975443 44799999999999999999999954 345999999999999999999999999986542110
Q ss_pred ----c-------cccccccccchhhccccC---CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc-cc
Q 006903 502 ----Q-------SFLAQTSSLKINDISNQM---CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT-VE 566 (626)
Q Consensus 502 ----~-------~~~~~~~~~~~pe~~~~~---~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~ 566 (626)
. ..-.-+..|.|||...-. ..++++|||||||+||+|+.|..||+... .+++.. .-
T Consensus 184 ~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~---------~~GgSlaLA 254 (302)
T KOG2345|consen 184 EGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY---------QQGGSLALA 254 (302)
T ss_pred echHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh---------hcCCeEEEe
Confidence 0 001125678999987543 34889999999999999999999986210 011111 11
Q ss_pred cccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 567 VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 567 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
+....+.-+. .......+.+++..|++.||.+||++.+++..++.+
T Consensus 255 v~n~q~s~P~-~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 255 VQNAQISIPN-SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred eeccccccCC-CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1111111111 111455689999999999999999999999988765
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=318.60 Aligned_cols=241 Identities=20% Similarity=0.252 Sum_probs=189.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+++.||||++.... .....+.+|++++..++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~ 85 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPG 85 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCC
Confidence 47899999999999995 568999999997532 1234578899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 86 g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 86 GDMMTLLMK---KDTFTEEETRFYIAETILAIDSIH----KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred cHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999963 346899999999999999999999 6799999999999999999999999999875321100
Q ss_pred --------------------------------------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCC
Q 006903 503 --------------------------------------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLV 544 (626)
Q Consensus 503 --------------------------------------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p 544 (626)
....+++.|++||+.....++.++|||||||++|||++|+.|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 012478889999998888889999999999999999999999
Q ss_pred CCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 006903 545 QNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPS---MNQVAV 608 (626)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~ev~~ 608 (626)
|..... .+....+............ ......+.+++.+|+. +|.+|++ +.|+++
T Consensus 239 f~~~~~-~~~~~~i~~~~~~~~~~~~--------~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 239 FCSDNP-QETYRKIINWKETLQFPDE--------VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCH-HHHHHHHHcCCCccCCCCC--------CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 975432 2222222221111110000 0112346778888886 8999998 888866
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=311.88 Aligned_cols=233 Identities=18% Similarity=0.227 Sum_probs=186.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC----CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI----SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|... +++.||+|.++.... ..+.+..|..++..+ +|++|+++++++...+..++||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC
Confidence 468999999999999854 678999999875431 223466777777766 58999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---C
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---D 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~ 501 (626)
+|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++.... .
T Consensus 85 ~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 85 GGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence 9999999853 346889999999999999999999 67999999999999999999999999999864321 2
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....++..|++||......++.++|||||||++|||+||+.||.... ..+....+...... .+...
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~-~~~~~~~i~~~~~~------------~p~~~ 224 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSIMEHNVA------------YPKSM 224 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCC------------CCCcC
Confidence 223457889999999988888999999999999999999999997432 23333333222110 11112
Q ss_pred HHHHHHHHhhccCCCCCCCCCH
Q 006903 582 MLKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
...+.+++.+|++.||++|++.
T Consensus 225 s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 225 SKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CHHHHHHHHHHcccCHHhcCCC
Confidence 3357889999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=313.89 Aligned_cols=239 Identities=20% Similarity=0.266 Sum_probs=199.5
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.-||.|+||.||-|+ ..+.++||||++.-... ..+++.+|+..|++++|||+|.+.|+|..+...|||||||- |
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-G 110 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-G 110 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-c
Confidence 569999999999998 66789999999975432 23579999999999999999999999999999999999996 5
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLA 506 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~ 506 (626)
+-.|++.. ..+++...++-.|..+.+.||+||| +.+.||||||+.||||++.+.+|++|||.+.......+ +.
T Consensus 111 SAsDlleV--hkKplqEvEIAAi~~gaL~gLaYLH----S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAns-Fv 183 (948)
T KOG0577|consen 111 SASDLLEV--HKKPLQEVEIAAITHGALQGLAYLH----SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANS-FV 183 (948)
T ss_pred cHHHHHHH--HhccchHHHHHHHHHHHHHHHHHHH----HhhHHhhhccccceEecCCCeeeeccccchhhcCchhc-cc
Confidence 88888853 2357888899999999999999999 67899999999999999999999999998765544433 56
Q ss_pred cccccchhhcccc---CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 507 QTSSLKINDISNQ---MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 507 ~~~~~~~pe~~~~---~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
||++||+||++.. ..|+-|+||||+||+..||..+++|..+..-+...++....+.... ...++..
T Consensus 184 GTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtL-----------qs~eWS~ 252 (948)
T KOG0577|consen 184 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL-----------QSNEWSD 252 (948)
T ss_pred CCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCC-----------CCchhHH
Confidence 8999999998754 4678899999999999999999999876655555555444433221 2445667
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+..++..|++.-|.+|||.+++++.
T Consensus 253 ~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 253 YFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 78899999999999999999998664
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=316.99 Aligned_cols=242 Identities=21% Similarity=0.324 Sum_probs=198.1
Q ss_pred ccccccCCCcceEEEEeCC--C--cEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLDD--G--LMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~--g--~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|.||.|++|.|.. | ..||||.++.... ...+|.+|+.+|.+|+|||+++|+|+..+ ....+|||.++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 4789999999999998643 4 4699999987664 45789999999999999999999999877 67889999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccc
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF 504 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~ 504 (626)
.|+|.+.|+. .....|-......++.|||.|+.||. .+++|||||..+|+||-....+||+|||+.+........
T Consensus 194 lGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLe----skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 194 LGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLE----SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHh----hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 9999999986 34457778888899999999999999 789999999999999999999999999998875544332
Q ss_pred cc------cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 505 LA------QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 505 ~~------~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
+. -+..|.+||.+.....+.++|||+|||++|||+| |+.||.+. .-.+.++.+-..+. + ..
T Consensus 269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~-~g~qIL~~iD~~er--------L---pR 336 (1039)
T KOG0199|consen 269 YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC-RGIQILKNIDAGER--------L---PR 336 (1039)
T ss_pred eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC-CHHHHHHhcccccc--------C---CC
Confidence 21 2446889999999999999999999999999999 66787643 33333333321111 1 13
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
++.|.+.+++++..||..+|++|||+..|.+.+
T Consensus 337 Pk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 337 PKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 455677899999999999999999999997444
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=304.44 Aligned_cols=241 Identities=20% Similarity=0.312 Sum_probs=194.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|+.+++.++||||+++++++......++||||+++++|
T Consensus 25 ~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L 104 (296)
T cd06654 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (296)
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCH
Confidence 36799999999999984 578999999987654 3346788999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++.. ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++...... ....
T Consensus 105 ~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH----~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 176 (296)
T cd06654 105 TDVVTE----TCMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (296)
T ss_pred HHHHHh----cCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcc
Confidence 999853 35789999999999999999999 679999999999999999999999999987643221 1223
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||.......+.++|||||||++|||++|+.||........+.... .... ... .........+
T Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~-~~~~-~~~--------~~~~~~~~~l 246 (296)
T cd06654 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGT-PEL--------QNPEKLSAIF 246 (296)
T ss_pred cCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHh-cCCC-CCC--------CCccccCHHH
Confidence 56778999998877778899999999999999999999997544322222111 1110 000 0111223457
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+++.+||..+|++||++.|+++.
T Consensus 247 ~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 247 RDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHHCcCCcccCcCHHHHhhC
Confidence 889999999999999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-36 Score=302.00 Aligned_cols=245 Identities=16% Similarity=0.242 Sum_probs=190.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+.++++++||||+++++++..++..++||||+++++|
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L 93 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSL 93 (267)
T ss_pred hheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcH
Confidence 37899999999999994 678999999987543 2345678999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.++++. ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||++...... ....
T Consensus 94 ~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd06646 94 QDIYHV---TGPLSELQIAYVCRETLQGLAYLH----SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSF 166 (267)
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCcc
Confidence 999863 246899999999999999999999 679999999999999999999999999998643221 1223
Q ss_pred ccccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 506 AQTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 506 ~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
.++..|++||... ...++.++|||||||++|||++|+.|+.......... ......... +... ......
T Consensus 167 ~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~~----~~~~---~~~~~~ 238 (267)
T cd06646 167 IGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-LMSKSNFQP----PKLK---DKTKWS 238 (267)
T ss_pred ccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe-eeecCCCCC----CCCc---cccccC
Confidence 4667899999763 3345789999999999999999999986432211110 000000000 0000 011223
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
..+.+++.+||+.+|++||+++++++.|
T Consensus 239 ~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 239 STFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 4688999999999999999999998653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=304.49 Aligned_cols=247 Identities=20% Similarity=0.274 Sum_probs=194.5
Q ss_pred cccccCCCcceEEEEeC-----CCcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEe--CCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLD-----DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCS--KQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~-----~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~--~~~~~lv~Ey 422 (626)
+.||+|+||.||++.+. ++..||||.++..... .+++.+|+++++.++||||+++++++.. ....+++|||
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 89 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEY 89 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEec
Confidence 78999999999999853 3689999999866553 5689999999999999999999998877 5578999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
+++++|.+++... ...+++..+..++.+++.||+||| +++|+||||||+||+++.++.++++|||++.......
T Consensus 90 ~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05038 90 LPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLG----SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDK 163 (284)
T ss_pred CCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHhEEEcCCCCEEEcccccccccccCC
Confidence 9999999999642 236899999999999999999999 6799999999999999999999999999986543211
Q ss_pred c------ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchh-------------HHHHHHhhccc
Q 006903 503 S------FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLA-------------TWVHSVVREEW 563 (626)
Q Consensus 503 ~------~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~-------------~~~~~~~~~~~ 563 (626)
. ....+..|.+||......++.++||||||+++|||+||+.|+....... ...........
T Consensus 164 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd05038 164 DYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGE 243 (284)
T ss_pred cceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCC
Confidence 1 1122345788998777778899999999999999999998875322110 00000000000
Q ss_pred ccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 564 TVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 564 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
. ......+...+.+++.+||+.+|++||||.||+++|+++.
T Consensus 244 ~----------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 244 R----------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred c----------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 0 0011223356889999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=303.87 Aligned_cols=250 Identities=20% Similarity=0.281 Sum_probs=189.4
Q ss_pred ccccccCCCcceEEEEeCC---------------CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeC
Q 006903 351 AELLGRGKHGSLYRVVLDD---------------GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK 413 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~---------------g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~ 413 (626)
.+.||+|+||.||+++... ...||+|.++.... ..+.+.+|++++++++||||+++++++...
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 89 (295)
T cd05097 10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSD 89 (295)
T ss_pred hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence 3679999999999987532 23589999875432 235689999999999999999999999999
Q ss_pred CeEEEEEeecCCCChhHhhcCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC
Q 006903 414 QEKLLVYEYQPNGSLFNLLHGSE---------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN 484 (626)
Q Consensus 414 ~~~~lv~Ey~~~g~L~~~l~~~~---------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~ 484 (626)
+..++||||+++++|.+++.... ....+++..++.++.+++.||+||| +.+++||||||+||+++++
T Consensus 90 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i~H~dlkp~Nill~~~ 165 (295)
T cd05097 90 DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA----SLNFVHRDLATRNCLVGNH 165 (295)
T ss_pred CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH----hcCeeccccChhhEEEcCC
Confidence 99999999999999999985421 1124789999999999999999999 6799999999999999999
Q ss_pred CCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc--CCCCCCCCcchhHHHHH
Q 006903 485 MEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT--GKLVQNNGFNLATWVHS 557 (626)
Q Consensus 485 ~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt--g~~p~~~~~~~~~~~~~ 557 (626)
+.+||+|||++....... ....++..|++||......++.++|||||||++|||++ |..||... ...+....
T Consensus 166 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~-~~~~~~~~ 244 (295)
T cd05097 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL-SDEQVIEN 244 (295)
T ss_pred CcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc-ChHHHHHH
Confidence 999999999986432211 11123457899998877778999999999999999998 45566432 11221111
Q ss_pred H---hhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 558 V---VREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 558 ~---~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
. .......... ...+..+..+.+++.+||+.||++||++.+|++.|++
T Consensus 245 ~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 245 TGEFFRNQGRQIYL-------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHhhhhccccccC-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1 1110000000 0011123468999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=296.64 Aligned_cols=244 Identities=21% Similarity=0.379 Sum_probs=195.2
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||++...++..+|+|.+.......+.+.+|++++++++|+||+++.+++.. ...+++|||+++|+|.+
T Consensus 11 ~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~ 89 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLD 89 (260)
T ss_pred EeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHH
Confidence 47899999999999998778889999987655556789999999999999999999998877 77899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
++... ....+++..+..++.+++.||.||| +.+++||||||+||+++.++.+|++|||++....... ....
T Consensus 90 ~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH----~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 164 (260)
T cd05073 90 FLKSD-EGSKQPLPKLIDFSAQIAEGMAFIE----QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 164 (260)
T ss_pred HHHhC-CccccCHHHHHHHHHHHHHHHHHHH----hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCc
Confidence 99643 2356889999999999999999999 5799999999999999999999999999976432211 1112
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++|||||||++||++| |+.||.... ..+...... ...... ........+
T Consensus 165 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-~~~~~~~~~-~~~~~~----------~~~~~~~~~ 232 (260)
T cd05073 165 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-NPEVIRALE-RGYRMP----------RPENCPEEL 232 (260)
T ss_pred ccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHh-CCCCCC----------CcccCCHHH
Confidence 3455899998877778899999999999999999 888886432 222222211 111111 111223458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
.+++.+||+.+|++||++.++.+.|+.
T Consensus 233 ~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 233 YNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=298.21 Aligned_cols=247 Identities=19% Similarity=0.264 Sum_probs=183.8
Q ss_pred ccccCCCcceEEEEeCCC---cEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 353 LLGRGKHGSLYRVVLDDG---LMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~~~g---~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.||+|+||.||++...++ ..+++|.+.... ...+.+.+|+..++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999975433 356677766543 234679999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----C
Q 006903 428 LFNLLHGSEN-GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-----D 501 (626)
Q Consensus 428 L~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-----~ 501 (626)
|.++++.... ...+++.....++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++..... .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH----KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH----HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 9999974322 234677778899999999999999 67899999999999999999999999998753211 1
Q ss_pred ccccccccccchhhcccc-------CCCCCcchhHHHHHHHHHHHcC-CCCCCCCcchhHHHHHHhhcccccccccHHHH
Q 006903 502 QSFLAQTSSLKINDISNQ-------MCSTIKADVYGFGVILLELLTG-KLVQNNGFNLATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~-------~~~~~k~DVwSfGvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
.....++..|++||.... ..++.++|||||||++|||+++ ..|+... +..+.......... ....++.+.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~-~~~~~~~~~~~~~~-~~~~~~~~~ 235 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL-SDREVLNHVIKDQQ-VKLFKPQLE 235 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHhhcc-cccCCCccC
Confidence 122345667899997642 2347799999999999999975 5566533 33333333322211 111222111
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
......+.+++..|| .+|++||++++|++.|.
T Consensus 236 -----~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 236 -----LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred -----CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 112235677888999 67999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=315.68 Aligned_cols=242 Identities=17% Similarity=0.215 Sum_probs=191.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+++. .+++.||+|.+.... ...+.+.+|+.+++.++||||+++++++.+++..++||||+++
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~g 127 (370)
T cd05596 48 IKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPG 127 (370)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCC
Confidence 47899999999999985 468999999986432 2234578899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---- 501 (626)
|+|.+++.. ..++......++.|++.||.||| +++|+||||||+|||++.++.+||+|||++......
T Consensus 128 g~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~ 199 (370)
T cd05596 128 GDLVNLMSN----YDIPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVR 199 (370)
T ss_pred CcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCccc
Confidence 999999863 24778888899999999999999 679999999999999999999999999998654322
Q ss_pred ccccccccccchhhccccC----CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 502 QSFLAQTSSLKINDISNQM----CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~----~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
.....++..|++||..... .++.++|||||||++|||+||+.||..... ......+..........+
T Consensus 200 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-~~~~~~i~~~~~~~~~~~-------- 270 (370)
T cd05596 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-VGTYSKIMDHKNSLTFPD-------- 270 (370)
T ss_pred CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-HHHHHHHHcCCCcCCCCC--------
Confidence 1234578899999987543 368899999999999999999999975432 223333332211111100
Q ss_pred cHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNE--RPSMNQVAVM 609 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~--RPs~~ev~~~ 609 (626)
.......+.+++.+|++.+|++ ||++.|+++.
T Consensus 271 ~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 271 DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0012345778899999999988 9999999764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=299.58 Aligned_cols=244 Identities=22% Similarity=0.321 Sum_probs=191.3
Q ss_pred ccccCCCcceEEEEeCC-------CcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 353 LLGRGKHGSLYRVVLDD-------GLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~~~-------g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.||+|+||.||+|+..+ ++.+|||.+.... .....+.+|+++++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 69999999999998532 2579999886543 23467889999999999999999999999989999999999
Q ss_pred CCCChhHhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-----CeEEeeccC
Q 006903 424 PNGSLFNLLHGSE----NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-----EPCISEYGL 494 (626)
Q Consensus 424 ~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-----~~kl~DFGl 494 (626)
++|+|.++++... ....+++..++.++.+++.||.||| +.+++|+||||+||+++.+. .++++|||+
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE----QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH----hCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999996422 2235889999999999999999999 67899999999999999877 899999999
Q ss_pred ccccCCCcc-----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 495 IVTENHDQS-----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 495 ~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
+........ ....+..|++||......++.++|||||||++|||+| |+.||....+ .+......... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~-~~~-- 233 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN-QEVLQHVTAGG-RLQ-- 233 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH-HHHHHHHhcCC-ccC--
Confidence 764322111 1123456899998887788999999999999999998 9988864322 22222111111 000
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
.....+..+.+++.+||+.+|++||++.++++.|++
T Consensus 234 --------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 234 --------KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred --------CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111233467899999999999999999999998864
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=303.88 Aligned_cols=249 Identities=18% Similarity=0.297 Sum_probs=192.8
Q ss_pred ccccccCCCcceEEEEe-CCCc----EEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGL----MLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+|. .||+|.+...... ..++.+|+.+++.++||||+++++++... ..++++||+
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~ 90 (303)
T cd05110 12 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLM 90 (303)
T ss_pred ccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeehhc
Confidence 37899999999999984 4454 5799988754322 24688999999999999999999988654 467999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++.. ....+++..++.++.|++.||.||| +++|+||||||+||++++++.+||+|||+++......
T Consensus 91 ~~g~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 164 (303)
T cd05110 91 PHGCLLDYVHE--HKDNIGSQLLLNWCVQIAKGMMYLE----ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 164 (303)
T ss_pred CCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHh----hcCeeccccccceeeecCCCceEEccccccccccCccc
Confidence 99999999863 2346889999999999999999999 6799999999999999999999999999986533211
Q ss_pred ----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 ----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 ----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
.....+..|++||......++.++|||||||++|||++ |+.||... ...+.. .......... .
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~-~~~~~~-~~~~~~~~~~----------~ 232 (303)
T cd05110 165 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI-PTREIP-DLLEKGERLP----------Q 232 (303)
T ss_pred ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHH-HHHHCCCCCC----------C
Confidence 11223457899998877788999999999999999998 88888642 222221 1111111100 0
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
...+...+.+++.+||..+|++||+++++++.|+.+..+..
T Consensus 233 ~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 233 PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 11123457889999999999999999999999999876543
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=314.03 Aligned_cols=251 Identities=20% Similarity=0.265 Sum_probs=189.0
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCC-----eEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ-----EKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~-----~~~lv~ 420 (626)
..+.||+|+||.||++.. .+|+.||||++..... ..+.+.+|+++++.++||||+++++++...+ ..++||
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 83 (372)
T cd07853 4 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVT 83 (372)
T ss_pred ccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEe
Confidence 357899999999999985 5799999999865432 3357889999999999999999999998776 789999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+. ++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 84 e~~~-~~l~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 84 ELMQ-SDLHKIIVS---PQPLSSDHVKVFLYQILRGLKYLH----SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred eccc-cCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 9997 588888743 346899999999999999999999 67999999999999999999999999999865332
Q ss_pred Cc----cccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh---ccccccc-----
Q 006903 501 DQ----SFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR---EEWTVEV----- 567 (626)
Q Consensus 501 ~~----~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~----- 567 (626)
.. ....++..|++||.... ..++.++|||||||++|||++|+.||...... +....+.. .....+.
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCHHHHHHhhH
Confidence 21 12245678999998765 34688999999999999999999999744322 11111111 0000000
Q ss_pred ----------cc-HHHHh-hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 568 ----------FD-EVLIA-EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 568 ----------~d-~~~~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.. +.... ..........+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 235 GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00 00000 00011123457899999999999999999999864
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=324.38 Aligned_cols=254 Identities=20% Similarity=0.266 Sum_probs=187.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCC------CCccccceEEEeC-CeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKH------PNVLPPLAYYCSK-QEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H------~nIv~l~g~~~~~-~~~~lv~Ey 422 (626)
.+.||+|+||+||+|.. .+++.||||+++.......++..|+++++.++| .+++++++++..+ ...++|||+
T Consensus 134 ~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~ 213 (467)
T PTZ00284 134 LSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPK 213 (467)
T ss_pred EEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEec
Confidence 46899999999999985 568899999997544444556677777776654 4588888888764 468899998
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC----------------C
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM----------------E 486 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----------------~ 486 (626)
+ +++|.+++.. ...+++..+..|+.||+.||.|||+ ..|||||||||+|||++.++ .
T Consensus 214 ~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH~---~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~ 286 (467)
T PTZ00284 214 Y-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFHT---ELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCR 286 (467)
T ss_pred c-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEecCCcccccccccccCCCCce
Confidence 8 6789988853 3468999999999999999999993 25899999999999998765 4
Q ss_pred eEEeeccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-----
Q 006903 487 PCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE----- 561 (626)
Q Consensus 487 ~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~----- 561 (626)
+||+|||.+...........++..|++||+.....++.++|||||||++|||+||+.||....+. +.+..+...
T Consensus 287 vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~g~~p 365 (467)
T PTZ00284 287 VRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL-EHLHLMEKTLGRLP 365 (467)
T ss_pred EEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHcCCCC
Confidence 89999998866554455567889999999998888999999999999999999999999754332 111111000
Q ss_pred -ccc------------------cccccHHHHhh----h--ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHh
Q 006903 562 -EWT------------------VEVFDEVLIAE----A--ASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINN 612 (626)
Q Consensus 562 -~~~------------------~~~~d~~~~~~----~--~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~ 612 (626)
.+. ....++..... . ........+.+|+.+||+.||++|||++|+++ .+.+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 366 SEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLK 443 (467)
T ss_pred HHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccc
Confidence 000 00000000000 0 00001235779999999999999999999987 4444
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=293.13 Aligned_cols=242 Identities=21% Similarity=0.321 Sum_probs=193.2
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
+.||+|+||.||++...+++.||+|.+..... ..+.+.+|++++++++||||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36999999999999976699999999876543 3457899999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc-----c
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS-----F 504 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~-----~ 504 (626)
+++... ...+++..+..++.+++.||.||| +++|+||||||+||+++.++.+||+|||++........ .
T Consensus 81 ~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH----~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 81 TFLRKK--KNRLTVKKLLQMSLDAAAGMEYLE----SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 999642 346889999999999999999999 67999999999999999999999999999865332111 1
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...+..|.+||......++.++|||||||++|||+| |..||..... ......... .... ..+.....
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-~~~~~~~~~-~~~~----------~~~~~~~~ 222 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN-QQTRERIES-GYRM----------PAPQLCPE 222 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH-HHHHHHHhc-CCCC----------CCCccCCH
Confidence 112445899998877778999999999999999999 7777754321 222221111 1100 01112234
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
.+.+++.+||+.+|++|||+.|+++.|+
T Consensus 223 ~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 223 EIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 6889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=299.46 Aligned_cols=253 Identities=17% Similarity=0.195 Sum_probs=189.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+++.||+|+++.... ..+.+.+|+.++++++||||+++++++..++..++||||++ +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~ 83 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-M 83 (285)
T ss_pred eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-C
Confidence 36799999999999985 4689999999865432 23578899999999999999999999999999999999997 6
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---S 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~ 503 (626)
+|.+++........+++..+..++.|++.||.||| +++|+||||||+||++++++.+||+|||++....... .
T Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (285)
T cd07861 84 DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH----SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT 159 (285)
T ss_pred CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence 89998865444467899999999999999999999 6799999999999999999999999999976432211 1
Q ss_pred ccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-cccc-------ccc--HHH
Q 006903 504 FLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-WTVE-------VFD--EVL 572 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~-------~~d--~~~ 572 (626)
...++..|++||.... ..++.++|||||||++|||+||+.||...............-. .... ..+ ...
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (285)
T cd07861 160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF 239 (285)
T ss_pred CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence 1234667999997643 4468899999999999999999999875433222111110000 0000 000 000
Q ss_pred Hh------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 IA------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. .........++.+++.+||+.||++|||+.+|+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 0000112345778999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=298.46 Aligned_cols=249 Identities=19% Similarity=0.293 Sum_probs=196.4
Q ss_pred ccccccCCCcceEEEEeC-CCc----EEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLD-DGL----MLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~----~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|... +|. .+|+|.+..... ..+++.+|++.+++++||||+++++++.. ...++||||+
T Consensus 12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 90 (279)
T cd05057 12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLM 90 (279)
T ss_pred cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecC
Confidence 478999999999999853 333 689998876543 23578899999999999999999999887 7889999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS 503 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~ 503 (626)
++|+|.+++.. ....+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||+++.......
T Consensus 91 ~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH----~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 164 (279)
T cd05057 91 PLGCLLDYVRN--HKDNIGSQYLLNWCVQIAKGMSYLE----EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK 164 (279)
T ss_pred CCCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHH----hCCEEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence 99999999964 2345899999999999999999999 67999999999999999999999999999865432211
Q ss_pred c-----cccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 504 F-----LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 504 ~-----~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
. ...+..|++||......++.++|||||||++||++| |+.||... ...++........... .
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~-----------~ 232 (279)
T cd05057 165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI-PAVEIPDLLEKGERLP-----------Q 232 (279)
T ss_pred ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHHhCCCCCC-----------C
Confidence 1 112346889998877778899999999999999999 99998643 3333333322211100 0
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
+..+...+.+++.+||..+|++||++.++++.|+++..+..
T Consensus 233 ~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 233 PPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 11122357788999999999999999999999999866544
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-36 Score=318.41 Aligned_cols=241 Identities=19% Similarity=0.237 Sum_probs=185.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+++.||+|++..... ..+.+.+|++++++++||||+++++.+.+++..++||||+++
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~g 85 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPG 85 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCC
Confidence 37899999999999984 5689999999875432 234688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH----- 500 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~----- 500 (626)
|+|.+++.. ...++......++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.....
T Consensus 86 g~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH----~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 86 GDMMSLLIR---MGIFPEDLARFYIAELTCAVESVH----KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 999999963 246788889999999999999999 67999999999999999999999999998642100
Q ss_pred ---------------------------------------------CccccccccccchhhccccCCCCCcchhHHHHHHH
Q 006903 501 ---------------------------------------------DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVIL 535 (626)
Q Consensus 501 ---------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl 535 (626)
......++..|++||+.....++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 00113467889999998888889999999999999
Q ss_pred HHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 006903 536 LELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPS---MNQVAV 608 (626)
Q Consensus 536 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~ev~~ 608 (626)
|||+||+.||........ ...+........... .... ...+.+++.+++ .+|++|++ +.|+++
T Consensus 239 ~elltG~~Pf~~~~~~~~-~~~i~~~~~~~~~p~----~~~~----s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 239 YEMLVGQPPFLAQTPLET-QMKVINWQTSLHIPP----QAKL----SPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHhCCCCCCCCCHHHH-HHHHHccCCCcCCCC----cccC----CHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 999999999975433222 222221111100000 0011 223555565654 49999987 777765
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=307.13 Aligned_cols=251 Identities=18% Similarity=0.278 Sum_probs=197.5
Q ss_pred cccccccCCCcceEEEEeC--------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 350 PAELLGRGKHGSLYRVVLD--------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~--------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
..+.||+|+||.||+|... ++..||+|.++.... ..+++.+|+++++++ +||||+++++++...+..++
T Consensus 16 i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (334)
T cd05100 16 LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 95 (334)
T ss_pred ecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEE
Confidence 3578999999999999732 134799998875432 235788999999999 79999999999999999999
Q ss_pred EEeecCCCChhHhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 419 VYEYQPNGSLFNLLHGSE-------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
+|||+++|+|.+++.... ....++|..++.++.|++.||.||| +++|+||||||+|||++.++
T Consensus 96 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH----~~givH~dlkp~Nill~~~~ 171 (334)
T cd05100 96 LVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA----SQKCIHRDLAARNVLVTEDN 171 (334)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH----HCCeeccccccceEEEcCCC
Confidence 999999999999996422 1235889999999999999999999 68999999999999999999
Q ss_pred CeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 486 EPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
.+||+|||+++...... .....+..|++||......++.++|||||||++|||++ |..||.. .+..++...+.
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~-~~~~~~~~~~~ 250 (334)
T cd05100 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG-IPVEELFKLLK 250 (334)
T ss_pred cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHH
Confidence 99999999986533211 11122346899999888888999999999999999998 7777753 34444443332
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
... ..+. .......+.+++.+||+.+|++||++.|+++.|+++...
T Consensus 251 ~~~-~~~~----------~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 251 EGH-RMDK----------PANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred cCC-CCCC----------CCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 221 1111 112234588899999999999999999999999988743
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=301.17 Aligned_cols=240 Identities=22% Similarity=0.245 Sum_probs=190.7
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||+|+||+||++.. .+++.||+|.+..... ..+.+.+|++++++++|+||+.+.+++..++..++||||+++|
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGG 85 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCc
Confidence 6799999999999985 5789999999865432 2245788999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--SF 504 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~~ 504 (626)
+|.+++... ....+++..+..++.|++.||.||| +++|+||||||+||++++++.+||+|||++....... ..
T Consensus 86 ~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH----~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05632 86 DLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLH----RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG 160 (285)
T ss_pred cHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence 999888642 2346999999999999999999999 6799999999999999999999999999985432211 22
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH---HHHHhhcccccccccHHHHhhhccHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW---VHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
..++..|++||......++.++|+|||||++|||+||+.||....+.... ........ . ......
T Consensus 161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~ 228 (285)
T cd05632 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE---E---------VYSAKF 228 (285)
T ss_pred CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc---c---------ccCccC
Confidence 35678899999988778899999999999999999999999754322111 11111100 0 011122
Q ss_pred HHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
...+.+++.+||+.||++||+ +.+++.
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred CHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 335778899999999999999 666665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=304.82 Aligned_cols=256 Identities=17% Similarity=0.194 Sum_probs=191.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|+. .+++.||+|.++... .....+.+|++++++++||||+++++++..++..++||||+++ +
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 89 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-D 89 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-C
Confidence 37899999999999985 468899999987543 2335678999999999999999999999999999999999975 8
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~ 504 (626)
|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++...... ...
T Consensus 90 l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 163 (309)
T cd07872 90 LKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCH----RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSN 163 (309)
T ss_pred HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccccc
Confidence 88888632 345889999999999999999999 679999999999999999999999999998653221 122
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc--ccc----c------ccHH
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW--TVE----V------FDEV 571 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~----~------~d~~ 571 (626)
..++..|++||.... ..++.++|||||||++|||+||+.||..... .+.......... ..+ . .+..
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07872 164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV-EDELHLIFRLLGTPTEETWPGISSNDEFKNYN 242 (309)
T ss_pred ccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHhhhcchhhhhhhh
Confidence 345678999997643 4578899999999999999999999864322 222221111000 000 0 0000
Q ss_pred HHhh------hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 572 LIAE------AASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 572 ~~~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
.... ...+.....+.+++.+|++.||++|||+.|+++ .++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 243 FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 0000 000112345788999999999999999999987 444443
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=302.02 Aligned_cols=238 Identities=19% Similarity=0.261 Sum_probs=188.6
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|. ..+++.||+|.+..... ..+++.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 85 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGS 85 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCC
Confidence 3689999999999998 45789999999865432 23568899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-Cccccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-DQSFLA 506 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~~~~~~ 506 (626)
|..+. .+++.....++.|++.||.||| +.+|+|+||||+||+++.++.++|+|||++..... ......
T Consensus 86 l~~~~-------~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 154 (279)
T cd06619 86 LDVYR-------KIPEHVLGRIAVAVVKGLTYLW----SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV 154 (279)
T ss_pred hHHhh-------cCCHHHHHHHHHHHHHHHHHHH----HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCC
Confidence 97653 3678888999999999999999 67999999999999999999999999999864322 223345
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchh------HHHHHHhhcccccccccHHHHhhhccHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLA------TWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~------~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
++..|++||......++.++|||||||++|||+||+.||....... ........... +... ...
T Consensus 155 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------~~~~----~~~ 224 (279)
T cd06619 155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP------PVLP----VGQ 224 (279)
T ss_pred CChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC------CCCC----CCc
Confidence 6778999999887788999999999999999999999986321110 11111111100 0000 011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
....+.+++.+||+.+|++||+++|+++.
T Consensus 225 ~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 225 FSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 23357889999999999999999999775
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=302.39 Aligned_cols=250 Identities=20% Similarity=0.292 Sum_probs=192.1
Q ss_pred ccccccCCCcceEEEEeCC-----------------CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEE
Q 006903 351 AELLGRGKHGSLYRVVLDD-----------------GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYC 411 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~-----------------g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~ 411 (626)
.+.||+|+||.||+|...+ +..||+|.+..... ..+++.+|++++++++||||+++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCT 89 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 4789999999999987432 35689999876432 3457889999999999999999999999
Q ss_pred eCCeEEEEEeecCCCChhHhhcCCC--------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC
Q 006903 412 SKQEKLLVYEYQPNGSLFNLLHGSE--------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN 483 (626)
Q Consensus 412 ~~~~~~lv~Ey~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~ 483 (626)
.++..+++|||+++++|.+++.... ....+++..++.++.|++.||+||| +.+|+||||||+||++++
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH----~~~i~H~dlkp~Nili~~ 165 (296)
T cd05051 90 VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE----SLNFVHRDLATRNCLVGK 165 (296)
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH----HcCccccccchhceeecC
Confidence 9999999999999999999996432 1126899999999999999999999 679999999999999999
Q ss_pred CCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc--CCCCCCCCcchhHHHH
Q 006903 484 NMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT--GKLVQNNGFNLATWVH 556 (626)
Q Consensus 484 ~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt--g~~p~~~~~~~~~~~~ 556 (626)
++.++++|||++....... .....+..|++||......++.++|||||||++|||++ |..|+..... .+...
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~-~~~~~ 244 (296)
T cd05051 166 NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD-QQVIE 244 (296)
T ss_pred CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-HHHHH
Confidence 9999999999986432211 11223457999998877778999999999999999998 5667653222 22111
Q ss_pred HHhhc---ccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 557 SVVRE---EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 557 ~~~~~---~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
..... ....... ......+..+.+++.+||+.||++|||+.||++.|++
T Consensus 245 ~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 245 NAGHFFRDDGRQIYL-------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HHHhccccccccccC-------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 11110 0000000 0111223468999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=307.54 Aligned_cols=256 Identities=17% Similarity=0.224 Sum_probs=189.9
Q ss_pred cccccC--CCcceEEEE-eCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRG--KHGSLYRVV-LDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G--~fG~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
++||+| +||+||++. ..+|+.||+|++...... .+.+.+|+++++.++||||+++++++..++..++||||+++
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 83 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 83 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence 679999 678999998 467999999999764322 24577899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH----- 500 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~----- 500 (626)
|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++.++.++++||+.......
T Consensus 84 ~~l~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH----~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 84 GSAKDLICTH-FMDGMSELAIAYILQGVLKALDYIH----HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CcHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 9999999632 1245899999999999999999999 67999999999999999999999999986432110
Q ss_pred -----Cccccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH---
Q 006903 501 -----DQSFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE--- 570 (626)
Q Consensus 501 -----~~~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~--- 570 (626)
......++..|++||.... ..++.++|||||||++|||++|+.||....... ......... .....+.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~-~~~~~~~~~~ 236 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKLNGT-VPCLLDTTTI 236 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH-HHHHHhcCC-ccccccccch
Confidence 0112234556899998765 357899999999999999999999986432211 111111100 0000000
Q ss_pred ---------------------HH-----H------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 571 ---------------------VL-----I------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 571 ---------------------~~-----~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
.. . ...........+.+++.+||+.||++|||++|+++ .++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 00 0 00011122346889999999999999999999987 344443
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=315.70 Aligned_cols=193 Identities=21% Similarity=0.344 Sum_probs=172.3
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-C-----CCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-H-----PNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H-----~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.++||+|.||.|.||. ..+++.||||+++.....-.+...|+.+|..|+ | -|+|+++++|...++.|||+|.+
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL 270 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELL 270 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhh
Confidence 4889999999999998 667999999999987666677888999999997 4 48999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC--CCeEEeeccCccccCCC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN--MEPCISEYGLIVTENHD 501 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGl~~~~~~~ 501 (626)
.. +|+++++.. +..+++...+..++.||+.||.+|| +.+|||+||||+||||.+- ..+||+|||.+......
T Consensus 271 ~~-NLYellK~n-~f~Glsl~~ir~~~~Qil~~L~~L~----~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~ 344 (586)
T KOG0667|consen 271 ST-NLYELLKNN-KFRGLSLPLVRKFAQQILTALLFLH----ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR 344 (586)
T ss_pred hh-hHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCChhheeeccCCcCceeEEecccccccCCc
Confidence 65 999999863 3457999999999999999999999 6799999999999999753 46899999999887777
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF 549 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~ 549 (626)
...+..+.+|++||++.+.+|+.+.||||||||+.||+||.+.|.+..
T Consensus 345 vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 345 VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 777788999999999999999999999999999999999987776443
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=296.53 Aligned_cols=241 Identities=19% Similarity=0.266 Sum_probs=192.1
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC-------HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS-------SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~-------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|...+++.+|+|.++..... .+.+.+|++++++++|+||+++++++...+..+++|||+
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFV 84 (265)
T ss_pred cceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecC
Confidence 4789999999999999888999999988643211 145789999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--- 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--- 500 (626)
++++|.+++.. ...+++..+..++.|++.||+||| +.+|+|+||||+||++++++.++++|||++.....
T Consensus 85 ~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 85 PGGSISSILNR---FGPLPEPVFCKYTKQILDGVAYLH----NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 99999999963 245789999999999999999999 67899999999999999999999999998754211
Q ss_pred ------CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 501 ------DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 501 ------~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
......++..|.+||......++.++|||||||++|||+||+.||.....................
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------- 229 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPR-------- 229 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCC--------
Confidence 111234677899999988878889999999999999999999999754332222111111011000
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
........+.+++.+||+.+|++||++.|+++
T Consensus 230 --~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 230 --LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred --CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11122345788999999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=299.50 Aligned_cols=246 Identities=19% Similarity=0.261 Sum_probs=194.2
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... ++..||+|.+..... ....+.+|+++++.++||||+++++++......++||||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 90 (277)
T cd05032 11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMEL 90 (277)
T ss_pred EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEec
Confidence 478999999999999853 247899999875432 234688999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCC-------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 423 QPNGSLFNLLHGSEN-------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
+++|+|.+++..... ...++|..++.++.|++.||.||| +++|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~di~p~nill~~~~~~kl~dfg~~ 166 (277)
T cd05032 91 MAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA----AKKFVHRDLAARNCMVAEDLTVKIGDFGMT 166 (277)
T ss_pred CCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccChheEEEcCCCCEEECCcccc
Confidence 999999999964321 234789999999999999999999 689999999999999999999999999998
Q ss_pred cccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 496 VTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 496 ~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
+...... ....++..|++||......++.++|||||||++||++| |+.||... +..+...... .......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~-~~~~~~~~~~-~~~~~~~-- 242 (277)
T cd05032 167 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL-SNEEVLKFVI-DGGHLDL-- 242 (277)
T ss_pred hhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC-CHHHHHHHHh-cCCCCCC--
Confidence 6432211 11233567899998877778999999999999999998 88887532 2233222222 1111111
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
+......+.+++.+||+.+|++|||+.++++.|++
T Consensus 243 --------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 243 --------PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred --------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 11124468899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=302.07 Aligned_cols=250 Identities=20% Similarity=0.283 Sum_probs=190.2
Q ss_pred ccccccCCCcceEEEEeC-----------------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEE
Q 006903 351 AELLGRGKHGSLYRVVLD-----------------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYC 411 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-----------------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~ 411 (626)
.+.||+|+||.||++... ++..||+|.++.... ..+++.+|++++++++|+||+++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05095 10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCI 89 (296)
T ss_pred eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 467999999999998532 245799999875432 3357899999999999999999999999
Q ss_pred eCCeEEEEEeecCCCChhHhhcCCCC--------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC
Q 006903 412 SKQEKLLVYEYQPNGSLFNLLHGSEN--------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN 483 (626)
Q Consensus 412 ~~~~~~lv~Ey~~~g~L~~~l~~~~~--------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~ 483 (626)
..+..++||||+++|+|.+++..... ...+++.....++.|++.||+||| +.+|+||||||+|||+++
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~H~dlkp~Nili~~ 165 (296)
T cd05095 90 TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS----SLNFVHRDLATRNCLVGK 165 (296)
T ss_pred cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH----HCCeecccCChheEEEcC
Confidence 99999999999999999999864221 134788899999999999999999 679999999999999999
Q ss_pred CCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc--CCCCCCCCcchhHHHH
Q 006903 484 NMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT--GKLVQNNGFNLATWVH 556 (626)
Q Consensus 484 ~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt--g~~p~~~~~~~~~~~~ 556 (626)
++.++++|||+++...... .....+..|++||......++.++|||||||++|||+| |..|+... +..+...
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~-~~~~~~~ 244 (296)
T cd05095 166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL-SDEQVIE 244 (296)
T ss_pred CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc-ChHHHHH
Confidence 9999999999986432211 11122456788887766678999999999999999998 66777532 2222222
Q ss_pred HH---hhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 557 SV---VREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 557 ~~---~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
.. .......... .....+...+.+++.+||+.||++||++.||++.|++
T Consensus 245 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 245 NTGEFFRDQGRQVYL-------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHhhccccccC-------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11 1110000000 0011233568899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=316.93 Aligned_cols=242 Identities=19% Similarity=0.220 Sum_probs=188.2
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++. ..+++.||||++..... ..+.+.+|++++++++||||+++++++.+.+..|+||||+++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~g 85 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPG 85 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCC
Confidence 3789999999999998 45789999999865321 224678899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---- 501 (626)
|+|.+++.. ...+++.....++.|++.||.||| +.+|+||||||+|||++.++.+|++|||+++.....
T Consensus 86 g~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH----~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 86 GDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVH----KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999963 346888899999999999999999 689999999999999999999999999998521100
Q ss_pred ----------------------------------------------ccccccccccchhhccccCCCCCcchhHHHHHHH
Q 006903 502 ----------------------------------------------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVIL 535 (626)
Q Consensus 502 ----------------------------------------------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl 535 (626)
.....++..|++||......++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 0013477889999998888889999999999999
Q ss_pred HHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCC---CCHHHHHHH
Q 006903 536 LELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNER---PSMNQVAVM 609 (626)
Q Consensus 536 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~ev~~~ 609 (626)
|||+||+.||..... .+....+..........+ .......+.+++.+|+. +|.+| |++.|++..
T Consensus 239 ~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~~p~--------~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 239 FECLIGWPPFCSENS-HETYRKIINWRETLYFPD--------DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhcCCCCCCCCCH-HHHHHHHHccCCccCCCC--------CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 999999999975432 222222222111111000 00112347788889997 66665 699998774
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=297.40 Aligned_cols=247 Identities=20% Similarity=0.278 Sum_probs=194.5
Q ss_pred ccccccCCCcceEEEEeCC----CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLDD----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|...+ ...||||....... ..+.+.+|++++++++||||+++++++.. +..++||||++
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~ 89 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAP 89 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCC
Confidence 4789999999999998543 34699998875432 34578999999999999999999998765 55789999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-- 502 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-- 502 (626)
+|+|.+++.. ....+++..++.++.+++.||.||| +.+++||||||+||+++.++.+|++|||+++......
T Consensus 90 ~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 163 (270)
T cd05056 90 LGELRSYLQV--NKYSLDLASLILYSYQLSTALAYLE----SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY 163 (270)
T ss_pred CCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccChheEEEecCCCeEEccCceeeecccccce
Confidence 9999999964 2346899999999999999999999 6799999999999999999999999999986543221
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
.....+..|++||......++.++|||||||++||+++ |+.||...... +............ ...
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~-----------~~~ 231 (270)
T cd05056 164 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-DVIGRIENGERLP-----------MPP 231 (270)
T ss_pred ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHcCCcCC-----------CCC
Confidence 11223356899998877778999999999999999986 99998644322 2222221111110 111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.....+.+++.+|+..+|++|||+.+++..|+++..+
T Consensus 232 ~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 232 NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 2234588899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-35 Score=302.44 Aligned_cols=190 Identities=20% Similarity=0.282 Sum_probs=155.9
Q ss_pred ccccccCCCcceEEEEeC---CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEe--CCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD---DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS--KQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~--~~~~~lv~Ey~~~ 425 (626)
+..||+|+||.||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++.. ....+++|||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 468999999999999854 46889999987543 33567899999999999999999998864 456789999996
Q ss_pred CChhHhhcCCC------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee----CCCCCeEEeeccCc
Q 006903 426 GSLFNLLHGSE------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF----NNNMEPCISEYGLI 495 (626)
Q Consensus 426 g~L~~~l~~~~------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGl~ 495 (626)
++|.+++.... ....+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH----hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 48888774211 1235889999999999999999999 6799999999999999 45678999999998
Q ss_pred cccCCC------ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCC
Q 006903 496 VTENHD------QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQN 546 (626)
Q Consensus 496 ~~~~~~------~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~ 546 (626)
+..... .....++..|++||.... ..++.++||||+||++|||+||++||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence 653321 123456788999998755 457889999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=330.85 Aligned_cols=251 Identities=19% Similarity=0.260 Sum_probs=194.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+|+.||+|+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eG 86 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEG 86 (932)
T ss_pred EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCC
Confidence 37899999999999985 4689999999975432 235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCC--------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 426 GSLFNLLHGSE--------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 426 g~L~~~l~~~~--------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
|+|.+++.... ....+++..+++++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 87 GSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH----s~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~ 162 (932)
T PRK13184 87 YTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH----SKGVLHRDLKPDNILLGLFGEVVILDWGAAIF 162 (932)
T ss_pred CCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH----HCCccccCCchheEEEcCCCCEEEEecCccee
Confidence 99999986321 1234677888999999999999999 67999999999999999999999999999864
Q ss_pred cCCC---------------------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH
Q 006903 498 ENHD---------------------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH 556 (626)
Q Consensus 498 ~~~~---------------------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~ 556 (626)
.... .....++..|++||...+..++.++|||||||++|||+||+.||...........
T Consensus 163 i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~ 242 (932)
T PRK13184 163 KKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYR 242 (932)
T ss_pred cccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh
Confidence 3110 0113478899999998888889999999999999999999999864221111000
Q ss_pred HHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHhhhh
Q 006903 557 SVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERP-SMNQVAVMINNIKE 615 (626)
Q Consensus 557 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~ev~~~L~~i~~ 615 (626)
... .++.... ...+.+..+.+++.+|++.||++|| +++++.+.|+....
T Consensus 243 ~~i--------~~P~~~~--p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 243 DVI--------LSPIEVA--PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhc--------cChhhcc--ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 000 0000000 0112234578899999999999995 67778888877643
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=294.55 Aligned_cols=242 Identities=20% Similarity=0.271 Sum_probs=194.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||++.. .+++.+|+|.++... ...+.+.+|+.+++.++||||+++++.+.+.+..+++|||+++|+
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 84 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGD 84 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCc
Confidence 47899999999999984 468999999986433 234678899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---SF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~~ 504 (626)
|.+++... ....++......++.+++.||.||| +++|+|+||||+||++++++.++++|||++....... ..
T Consensus 85 l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (255)
T cd08219 85 LMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIH----EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT 159 (255)
T ss_pred HHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence 99988642 2346889999999999999999999 6799999999999999999999999999986543221 22
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++||||||+++|+|++|+.||... +.............. . .+......
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~-~~~~~~~~~~~~~~~-~----------~~~~~~~~ 227 (255)
T cd08219 160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN-SWKNLILKVCQGSYK-P----------LPSHYSYE 227 (255)
T ss_pred ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC-CHHHHHHHHhcCCCC-C----------CCcccCHH
Confidence 34667799999988888899999999999999999999998743 222222222221111 0 01112335
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+.+++.+||+.||++||++.+++..
T Consensus 228 ~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 228 LRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHHhCCcccCCCHHHHhhc
Confidence 7789999999999999999999753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=293.70 Aligned_cols=242 Identities=19% Similarity=0.316 Sum_probs=192.7
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||++.. +++.||+|.++.. ...+.+.+|+.++++++||||+++++++.. +..++||||+++|+|.+
T Consensus 11 ~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~ 87 (254)
T cd05083 11 GEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD-VTAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLVN 87 (254)
T ss_pred eeeeccCCCCceEeccc-CCCceEEEeecCc-chHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCCCCCHHH
Confidence 47899999999999875 5788999998653 345678999999999999999999998765 45799999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccccccccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS 510 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~~ 510 (626)
++... ....+++..++.++.|++.||.||| +++++||||||+||+++.++.+||+|||++............+..
T Consensus 88 ~l~~~-~~~~~~~~~~~~~~~qi~~al~~lH----~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 162 (254)
T cd05083 88 FLRTR-GRALVSVIQLLQFSLDVAEGMEYLE----SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVK 162 (254)
T ss_pred HHHhc-CcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCce
Confidence 99643 2346889999999999999999999 679999999999999999999999999998654332222334556
Q ss_pred cchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHH
Q 006903 511 LKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVA 589 (626)
Q Consensus 511 ~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~ 589 (626)
|++||......++.++|||||||++|||++ |+.||... +..+........ .... .....+..+.+++
T Consensus 163 y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~-~~~~----------~~~~~~~~~~~li 230 (254)
T cd05083 163 WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM-SLKEVKECVEKG-YRME----------PPEGCPADVYVLM 230 (254)
T ss_pred ecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC-CHHHHHHHHhCC-CCCC----------CCCcCCHHHHHHH
Confidence 899998877778899999999999999998 88887643 333332222211 1111 0112234578899
Q ss_pred hhccCCCCCCCCCHHHHHHHHHh
Q 006903 590 LRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 590 ~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
.+||+.+|++||+++++++.|++
T Consensus 231 ~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 231 TSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHcCCChhhCcCHHHHHHHHcc
Confidence 99999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=294.01 Aligned_cols=241 Identities=18% Similarity=0.311 Sum_probs=194.2
Q ss_pred ccccccCCCcceEEEEeCC-CcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLDD-GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|...+ ++.+|+|.+..... .+++.+|++++++++||||+++++++......++++||+++++|.
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~ 86 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVS 86 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHH
Confidence 3679999999999999654 88999999875433 678999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~~ 506 (626)
+++.. ....+++..+..++.+++.||.||| +.+|+||||+|+||++++++.+||+|||++...... .....
T Consensus 87 ~~l~~--~~~~l~~~~~~~~~~~l~~~l~~lh----~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 160 (256)
T cd06612 87 DIMKI--TNKTLTEEEIAAILYQTLKGLEYLH----SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVI 160 (256)
T ss_pred HHHHh--CccCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccccccc
Confidence 99963 2357899999999999999999999 679999999999999999999999999997653322 22334
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
++..|++||......++.++|||||||++|||+||+.|+.......... ..... ..... .........+.
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~-~~~~~--~~~~~-------~~~~~~~~~~~ 230 (256)
T cd06612 161 GTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF-MIPNK--PPPTL-------SDPEKWSPEFN 230 (256)
T ss_pred CCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh-hhccC--CCCCC-------CchhhcCHHHH
Confidence 5678999999887788999999999999999999999987433222111 11000 00000 01112234578
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 006903 587 QVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+++.+||+.+|++|||+.|+++
T Consensus 231 ~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 231 DFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHHHHHhcChhhCcCHHHHhc
Confidence 8999999999999999999975
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=299.71 Aligned_cols=246 Identities=21% Similarity=0.259 Sum_probs=195.6
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.||+|+||.||++.. ++++.||+|.+.... ...+.+.+|+++++.++||||+++++++...+..++||||+++|+|
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSL 90 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCH
Confidence 6899999999999984 568999999886543 2346789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-Ccccccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-DQSFLAQ 507 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~~~~~~~ 507 (626)
.+++.. ...+++.....++.+++.||.|||+ ..+|+||||||+||++++++.++|+|||++..... ......+
T Consensus 91 ~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~ 164 (284)
T cd06620 91 DRIYKK---GGPIPVEILGKIAVAVVEGLTYLYN---VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVG 164 (284)
T ss_pred HHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHH---hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCcccc
Confidence 999853 3468999999999999999999995 35899999999999999999999999998754321 1223456
Q ss_pred ccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcch----------hHHHHHHhhcccccccccHHHHhhhc
Q 006903 508 TSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNL----------ATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 508 ~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~----------~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
+..|++||......++.++|||||||++||++||+.||...... .++.......... .+ .
T Consensus 165 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~ 234 (284)
T cd06620 165 TSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP------RL----P 234 (284)
T ss_pred CcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC------CC----C
Confidence 77899999887777889999999999999999999998743221 1122222111100 00 0
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
..+....+.+++.+||+.||++|||+.|++++..-+
T Consensus 235 ~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 235 SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 112334588899999999999999999999875433
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=314.45 Aligned_cols=241 Identities=21% Similarity=0.284 Sum_probs=195.5
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
-+||+|.||+||-|+ ..+...+|||.+...+ ...+-+..||...++++|.|||+++|.+..+++.-|.||-+|||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 379999999999999 5567789999997654 44566889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCcccc---CCCcc
Q 006903 430 NLLHGSENGQSF--DWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTE---NHDQS 503 (626)
Q Consensus 430 ~~l~~~~~~~~l--~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~---~~~~~ 503 (626)
.+|+.. -+++ .+...-.+..||++||.||| ++.|||||||-+|||++. .|.+||+|||.++.. +....
T Consensus 661 sLLrsk--WGPlKDNEstm~fYtkQILeGLkYLH----en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TE 734 (1226)
T KOG4279|consen 661 SLLRSK--WGPLKDNESTMNFYTKQILEGLKYLH----ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTE 734 (1226)
T ss_pred HHHHhc--cCCCccchhHHHHHHHHHHHHhhhhh----hcceeeccccCCcEEEeeccceEEecccccchhhccCCcccc
Confidence 999742 3344 56777889999999999999 678999999999999974 788999999987642 33445
Q ss_pred ccccccccchhhccccC--CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 504 FLAQTSSLKINDISNQM--CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~--~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
...||..||+||++... .|+.++|||||||++.||.||++||..-.+....+.++-- . . ..+..+++.
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGm---y-K------vHP~iPeel 804 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGM---Y-K------VHPPIPEEL 804 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcc---e-e------cCCCCcHHH
Confidence 56788999999998644 5788999999999999999999999754333322221110 0 0 012345566
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+...++.+|+.+||.+||++.++++
T Consensus 805 saeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 805 SAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 677889999999999999999999976
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=309.15 Aligned_cols=249 Identities=18% Similarity=0.269 Sum_probs=187.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCC------eEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ------EKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~------~~~lv~ 420 (626)
.+.||+|+||.||++.. .+|+.||||++.... ...+.+.+|+.+++.++||||+++++++...+ ..++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 105 (359)
T cd07876 26 LKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVM 105 (359)
T ss_pred EEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEE
Confidence 47899999999999984 568999999987543 23356789999999999999999999886543 479999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++ +|.+.++ ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 106 e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH----~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 175 (359)
T cd07876 106 ELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT 175 (359)
T ss_pred eCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence 99975 6766664 24788889999999999999999 67999999999999999999999999999865322
Q ss_pred C--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc-cccc---------
Q 006903 501 D--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT-VEVF--------- 568 (626)
Q Consensus 501 ~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~--------- 568 (626)
. .....++..|++||......++.++|||||||++|||+||+.||........|.......... .+..
T Consensus 176 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (359)
T cd07876 176 NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRN 255 (359)
T ss_pred CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 2 223456788999999888888999999999999999999999997554332221111000000 0000
Q ss_pred -------------cHHHHh------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 569 -------------DEVLIA------EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 569 -------------d~~~~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...... ..........+.+++.+||+.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 256 YVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 00000113457899999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=298.18 Aligned_cols=243 Identities=18% Similarity=0.265 Sum_probs=190.8
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|... ++..+|+|.+.... ...+.+.+|+++++.++||||+++++++...+..++||||+++|+|
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l 89 (282)
T cd06643 10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 89 (282)
T ss_pred HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcH
Confidence 367999999999999954 57889999986543 2345788999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Ccccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~~ 505 (626)
..++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+|++|||++..... .....
T Consensus 90 ~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH----~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 163 (282)
T cd06643 90 DAVMLE--LERPLTEPQIRVVCKQTLEALNYLH----ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 163 (282)
T ss_pred HHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCcccEEEccCCCEEEccccccccccccccccccc
Confidence 998863 2346899999999999999999999 67999999999999999999999999999754322 11223
Q ss_pred ccccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 506 AQTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 506 ~~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
.++..|++||... ...++.++|||||||++|||++|+.||..... .+.+.......... .. .+..
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-~~~~~~~~~~~~~~-~~--------~~~~ 233 (282)
T cd06643 164 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP-MRVLLKIAKSEPPT-LA--------QPSR 233 (282)
T ss_pred cccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH-HHHHHHHhhcCCCC-CC--------Cccc
Confidence 4677899999763 34467899999999999999999999864322 22222222211110 00 0111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
....+.+++.+||+.+|++||++.++++.
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 234 WSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 23457889999999999999999998754
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=316.63 Aligned_cols=242 Identities=19% Similarity=0.220 Sum_probs=187.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+++.||||.+.... ...+.+.+|++++++++||||+++++.+.+++..++||||+++
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~ 85 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 85 (376)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCC
Confidence 36899999999999984 568999999986532 2235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH----- 500 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~----- 500 (626)
|+|.+++.. ...++......++.||+.||+||| +++|+||||||+|||++.++.+||+|||++.....
T Consensus 86 g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 86 GDMMSLLIR---LGIFEEDLARFYIAELTCAIESVH----KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 999999963 346788888999999999999999 67999999999999999999999999998642100
Q ss_pred -----------------------------------------CccccccccccchhhccccCCCCCcchhHHHHHHHHHHH
Q 006903 501 -----------------------------------------DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELL 539 (626)
Q Consensus 501 -----------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ell 539 (626)
......++..|++||......++.++|||||||++|||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 001235788899999998888899999999999999999
Q ss_pred cCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCC---CHHHHHHH
Q 006903 540 TGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERP---SMNQVAVM 609 (626)
Q Consensus 540 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---s~~ev~~~ 609 (626)
||+.||...... +....+........... .......+.+++.+|+ .+|.+|+ ++.|+++.
T Consensus 239 ~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~--------~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 239 VGQPPFLADTPA-ETQLKVINWETTLHIPS--------QAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hCCCCCCCCCHH-HHHHHHhccCccccCCC--------CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 999999754322 22222211110000000 0011223556666765 4999999 88888764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=313.28 Aligned_cols=242 Identities=18% Similarity=0.238 Sum_probs=188.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+.+++.++||||+++++++.+++..++||||+++
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~g 127 (370)
T cd05621 48 VKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPG 127 (370)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCC
Confidence 47899999999999995 468899999986432 2234578999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++.. ..+++.....++.|++.||+||| +++|+||||||+|||+++++.+||+|||++.......
T Consensus 128 g~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH----~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~ 199 (370)
T cd05621 128 GDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIH----SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVR 199 (370)
T ss_pred CcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHEEECCCCCEEEEecccceecccCCcee
Confidence 999999953 24788889999999999999999 6799999999999999999999999999987543221
Q ss_pred -cccccccccchhhccccC----CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 -SFLAQTSSLKINDISNQM----CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~----~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|++||..... .++.++|||||||++|||+||+.||.... .......+...........
T Consensus 200 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~-~~~~~~~i~~~~~~~~~p~-------- 270 (370)
T cd05621 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS-LVGTYSKIMDHKNSLNFPE-------- 270 (370)
T ss_pred cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCcccCCCC--------
Confidence 234578899999987543 36789999999999999999999997543 2333333332211111100
Q ss_pred cHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNE--RPSMNQVAVM 609 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~--RPs~~ev~~~ 609 (626)
.......+.+++.+|+..++.+ ||++.|+++.
T Consensus 271 ~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 271 DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred cccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0111234667778888765544 8999999875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=301.28 Aligned_cols=241 Identities=23% Similarity=0.257 Sum_probs=191.6
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||+|+||.||++.. .+++.||+|.+..... ..+.+.+|+.++++++|+||+.+++.+.+.+..++||||+++|
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~ 85 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG 85 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCC
Confidence 6799999999999984 5789999999865432 1245778999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--SF 504 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~~ 504 (626)
+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+||++++++.++++|||++....... ..
T Consensus 86 ~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~lH----~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 86 DLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLH----QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred cHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 999998542 2346899999999999999999999 6799999999999999999999999999986533221 12
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--HHHHhhcccccccccHHHHhhhccHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW--VHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
..++..|++||......++.++|||||||++|||++|+.||........+ ........ . ........
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~ 229 (285)
T cd05630 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-Q----------EEYSEKFS 229 (285)
T ss_pred CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh-h----------hhcCccCC
Confidence 35678899999988888899999999999999999999999753321111 11111000 0 00111223
Q ss_pred HHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
..+.+++.+||+.||++||| ++|+++
T Consensus 230 ~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 230 PDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 35788999999999999999 888877
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=307.98 Aligned_cols=249 Identities=20% Similarity=0.239 Sum_probs=188.0
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||.||+|. ..+++.||||++..... ..+.+.+|++++++++||||+++++++... ...++++
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~ 99 (343)
T cd07878 20 LTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVT 99 (343)
T ss_pred heecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEe
Confidence 3689999999999998 45788999999875432 235677899999999999999999987543 3478999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
|++ +++|.+++.. ..+++..+..++.|++.||.||| +++|+||||||+|||+++++.+||+|||+++....
T Consensus 100 ~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 100 NLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIH----SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD 170 (343)
T ss_pred ecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence 988 7799888742 35899999999999999999999 67999999999999999999999999999876554
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc--cccccccH-------
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE--WTVEVFDE------- 570 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~~~d~------- 570 (626)
......++..|++||.... ..++.++|||||||++|||++|+.||...... +.+....... ...+....
T Consensus 171 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07878 171 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIMEVVGTPSPEVLKKISSEHAR 249 (343)
T ss_pred CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhcchhhHH
Confidence 4444567888999998755 46788999999999999999999998643322 2121111100 00000000
Q ss_pred HHHh--hhcc--------HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 571 VLIA--EAAS--------EERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 571 ~~~~--~~~~--------~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.... .... ......+.+++.+|++.||++|||+.|++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 250 KYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0000 0012246789999999999999999999863
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=298.69 Aligned_cols=242 Identities=26% Similarity=0.435 Sum_probs=192.4
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHH---HHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSE---DFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~---~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||+||++... +++.+|+|.+........ ...+|+..+++++||||+++++++......++||||++++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~ 83 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGG 83 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccc
Confidence 478999999999999954 577999999987653332 3356999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc---CCCcc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE---NHDQS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~---~~~~~ 503 (626)
+|.+++. ....+++..+..++.|+++||.||| +.+|+||||||+||++++++.++|+|||.+... .....
T Consensus 84 ~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh----~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~ 156 (260)
T PF00069_consen 84 SLQDYLQ---KNKPLSEEEILKIAYQILEALAYLH----SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFN 156 (260)
T ss_dssp BHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHH----HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBS
T ss_pred ccccccc---ccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccccccccc
Confidence 9999996 2356899999999999999999999 579999999999999999999999999998642 22223
Q ss_pred ccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCc--chhHHHHHHhhcccccccccHHHHhhhc-cH
Q 006903 504 FLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGF--NLATWVHSVVREEWTVEVFDEVLIAEAA-SE 579 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~ 579 (626)
...++..|.+||... ....+.++||||+|+++|+|++|+.|+.... +............ ...... ..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 227 (260)
T PF00069_consen 157 PFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRP---------LPSSSQQSR 227 (260)
T ss_dssp SSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTH---------HHHHTTSHT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccc---------ccccccccc
Confidence 445677899999987 6778999999999999999999999987541 1111111111100 000000 00
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+.+++.+||+.||++||++.++++
T Consensus 228 ~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 228 EKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp TSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11256889999999999999999999975
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=283.37 Aligned_cols=244 Identities=20% Similarity=0.321 Sum_probs=196.9
Q ss_pred ccccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC-----CH----HHHHHHHHHhccC-CCCCccccceEEEeCCeEE
Q 006903 349 APAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI-----SS----EDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKL 417 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~-----~~----~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~ 417 (626)
.+++++|+|..++|-++. .++|..+|+|++..... .. +.-.+|+.+|+++ .||+|+++.++|.++.+.+
T Consensus 20 ~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~F 99 (411)
T KOG0599|consen 20 EPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVF 99 (411)
T ss_pred ChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhh
Confidence 367899999999999887 56789999999864331 11 3456899999887 5999999999999999999
Q ss_pred EEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 418 LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
+|+|.|+.|.|+|+|.. ...++.....+|+.|+..|+.||| .++||||||||+|||+|++.++||+|||++..
T Consensus 100 lVFdl~prGELFDyLts---~VtlSEK~tR~iMrqlfegVeylH----a~~IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 100 LVFDLMPRGELFDYLTS---KVTLSEKETRRIMRQLFEGVEYLH----ARNIVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred hhhhhcccchHHHHhhh---heeecHHHHHHHHHHHHHHHHHHH----HhhhhhcccChhheeeccccceEEeccceeec
Confidence 99999999999999953 457899999999999999999999 67999999999999999999999999999876
Q ss_pred cCC--Cccccccccccchhhcccc------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 498 ENH--DQSFLAQTSSLKINDISNQ------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 498 ~~~--~~~~~~~~~~~~~pe~~~~------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
... .-...+||+.|.+||++.. ..|+..+|.||.||++|.|+.|-+||.....+. .++.++.+.+... .
T Consensus 173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml-MLR~ImeGkyqF~--s 249 (411)
T KOG0599|consen 173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML-MLRMIMEGKYQFR--S 249 (411)
T ss_pred cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH-HHHHHHhcccccC--C
Confidence 443 3356789999999998643 246778999999999999999999997533221 2233333332211 1
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+ ...+....+.+++.+|++.||++|.|++|++.
T Consensus 250 p------eWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 250 P------EWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred c------chhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 1 12233445788999999999999999999986
|
|
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=292.09 Aligned_cols=242 Identities=21% Similarity=0.320 Sum_probs=196.2
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||.++ ..+++.+++|.+.... ....++.+|++++++++|+||+++++++...+..+++|||+++|
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (256)
T cd08221 5 IRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGG 84 (256)
T ss_pred eeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCC
Confidence 4789999999999988 4568999999986543 23356889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---S 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~ 503 (626)
+|.+++.... ...+++..+..++.+++.||.||| +.+++||||||+||++++++.+||+|||++....... .
T Consensus 85 ~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (256)
T cd08221 85 TLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIH----KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE 159 (256)
T ss_pred cHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHH----hCCccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence 9999997432 356899999999999999999999 6799999999999999999999999999986543322 2
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...++..|.+||.......+.++||||||+++|||++|+.||... ...+....+....... .......
T Consensus 160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~~~~ 227 (256)
T cd08221 160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT-NPLNLVVKIVQGNYTP-----------VVSVYSS 227 (256)
T ss_pred ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHcCCCCC-----------CccccCH
Confidence 334677899999887777889999999999999999999998643 3333333333222111 0112234
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+.+++.+||+.+|++||++.|+++.
T Consensus 228 ~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 228 ELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHHHHHHHHcccCcccCCCHHHHhhC
Confidence 57889999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=304.94 Aligned_cols=233 Identities=16% Similarity=0.206 Sum_probs=186.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|.. .+|+.||+|++.... ...+.+..|.+++..+. |++|+++.+++.+.+..++||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~ 84 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVN 84 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCC
Confidence 47899999999999984 568999999987532 22345778888888775 5778889999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---C
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---D 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~ 501 (626)
+|+|.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.... .
T Consensus 85 ~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH----~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~ 157 (323)
T cd05615 85 GGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLH----RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT 157 (323)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence 9999999853 346899999999999999999999 67999999999999999999999999999864321 1
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....++..|++||......++.++|||||||++|||+||+.||.... .......+...... .+...
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-~~~~~~~i~~~~~~------------~p~~~ 224 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED-EDELFQSIMEHNVS------------YPKSL 224 (323)
T ss_pred ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCC------------CCccC
Confidence 223457888999999888888999999999999999999999997432 23333333322111 01112
Q ss_pred HHHHHHHHhhccCCCCCCCCCH
Q 006903 582 MLKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
...+.+++.+||+.+|++|++.
T Consensus 225 ~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 225 SKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CHHHHHHHHHHcccCHhhCCCC
Confidence 2357788999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=309.32 Aligned_cols=249 Identities=17% Similarity=0.210 Sum_probs=187.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||.||++.. .+++.||||++..... ..+.+.+|+.+++.++||||+++++++... ...++||
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 101 (355)
T cd07874 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVM 101 (355)
T ss_pred EEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEh
Confidence 36899999999999984 4689999999975432 235677899999999999999999988643 3469999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++ ++.+.+. ..+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||+++....
T Consensus 102 e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH----~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~ 171 (355)
T cd07874 102 ELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_pred hhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence 99975 6777764 24788899999999999999999 68999999999999999999999999999875433
Q ss_pred C--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc-cc-----------
Q 006903 501 D--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT-VE----------- 566 (626)
Q Consensus 501 ~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~----------- 566 (626)
. .....++..|++||......++.++|||||||++|||++|+.||........+......-... .+
T Consensus 172 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (355)
T cd07874 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251 (355)
T ss_pred ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHH
Confidence 2 123456788999999888888999999999999999999999997543322221111000000 00
Q ss_pred ----------cccHHH------Hh-hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 567 ----------VFDEVL------IA-EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 567 ----------~~d~~~------~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...+.. .. ..........+.+++.+|++.||++|||+.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000 00 00011123457899999999999999999999884
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=295.02 Aligned_cols=241 Identities=19% Similarity=0.231 Sum_probs=187.0
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
..||+|+||.||+|.. .++..||+|.+..... ..+.+.+|++++++++|+||+++++++...+..++||||+++++|.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS 93 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 5799999999999984 5688999999876542 3457899999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCccccCC---Ccc
Q 006903 430 NLLHGSENGQSF--DWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTENH---DQS 503 (626)
Q Consensus 430 ~~l~~~~~~~~l--~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~~~---~~~ 503 (626)
++++... ..+ ++..+..++.|++.||+||| +.+|+||||||+||+++. ++.++|+|||++..... ...
T Consensus 94 ~~l~~~~--~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~ 167 (268)
T cd06624 94 ALLRSKW--GPLKDNEQTIIFYTKQILEGLKYLH----DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTE 167 (268)
T ss_pred HHHHHhc--ccCCCcHHHHHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccc
Confidence 9997422 234 78888999999999999999 679999999999999986 67899999999754322 112
Q ss_pred ccccccccchhhccccC--CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 504 FLAQTSSLKINDISNQM--CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~--~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
...++..|++||..... .++.++|||||||++|||++|+.|+................... ...+...
T Consensus 168 ~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 237 (268)
T cd06624 168 TFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIH----------PEIPESL 237 (268)
T ss_pred cCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccC----------CCCCccc
Confidence 23457789999986543 36789999999999999999999986432211111110000000 0011122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.+|++|||+.|++.
T Consensus 238 ~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 238 SAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 345788899999999999999999875
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=294.94 Aligned_cols=239 Identities=22% Similarity=0.330 Sum_probs=190.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----------HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----------SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLV 419 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv 419 (626)
...||+|+||.||+|.. .+++.+|+|.+...... .+.+.+|++++++++||||+++++++...+..++|
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIF 84 (267)
T ss_pred cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEE
Confidence 46899999999999985 46889999988654321 14578899999999999999999999999999999
Q ss_pred EeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 420 YEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 420 ~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
|||+++++|.+++.. ...+++..+..++.+++.||+||| +.+++||||||+||++++++.+||+|||+++...
T Consensus 85 ~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH----~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 85 LEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLH----NRGIIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred EEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHH----hcCcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 999999999999963 346889999999999999999999 6799999999999999999999999999976543
Q ss_pred CCc---------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 500 HDQ---------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 500 ~~~---------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
... ....++..|++||......++.++|||||||++|||++|+.||......... ....... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~-~~----- 230 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAI-FKIGENA-SP----- 230 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHH-HHHhccC-CC-----
Confidence 111 1123566789999887777888999999999999999999999754332221 1111100 00
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+......+.+++.+||+.||++||++.|+++
T Consensus 231 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 231 -----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 011122345788899999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=284.41 Aligned_cols=242 Identities=19% Similarity=0.270 Sum_probs=196.4
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.++||+|.|+.||++. .++|+.+|+|++.... ...+++.+|+.+-+.++|||||++...+.+....|+|+|+|.||
T Consensus 16 ~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~ 95 (355)
T KOG0033|consen 16 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 95 (355)
T ss_pred HHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccch
Confidence 4789999999999987 6789999999886543 34578899999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC---CCeEEeeccCccccCCCc-
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN---MEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl~~~~~~~~- 502 (626)
+|..-+-. ...+++...-.++.||+.+|.|+| .++|||||+||+|+|+... --+|++|||++.......
T Consensus 96 dl~~eIV~---R~~ySEa~aSH~~rQiLeal~yCH----~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~ 168 (355)
T KOG0033|consen 96 ELFEDIVA---REFYSEADASHCIQQILEALAYCH----SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA 168 (355)
T ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH----hcCceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence 99765532 145777888899999999999999 7899999999999999643 347999999998765322
Q ss_pred -cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 -SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
-...|++.|++||+....+|+..+|||+.||+||-|+.|.+||.+. +....++.+....+-... ...+..
T Consensus 169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~-~~~rlye~I~~g~yd~~~--------~~w~~i 239 (355)
T KOG0033|consen 169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-DQHRLYEQIKAGAYDYPS--------PEWDTV 239 (355)
T ss_pred cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc-cHHHHHHHHhccccCCCC--------cccCcC
Confidence 2346899999999999999999999999999999999999999853 334445555544332111 011222
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+...+++.+|+..||.+|.|+.|.++
T Consensus 240 s~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 240 TPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred CHHHHHHHHHHhccChhhhccHHHHhC
Confidence 334778899999999999999988754
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-35 Score=315.07 Aligned_cols=248 Identities=18% Similarity=0.225 Sum_probs=186.4
Q ss_pred cccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 350 PAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
..+.||+|+||.||+|... +++.||||.... ..+.+|++++++++|||||++++++...+..++||||+. ++|
T Consensus 173 i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L 246 (461)
T PHA03211 173 IHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDL 246 (461)
T ss_pred EEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCH
Confidence 3478999999999999954 588999996432 346789999999999999999999999999999999995 789
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-----cc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-----QS 503 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-----~~ 503 (626)
.+++.. ....++|..++.++.|++.||.||| +.+||||||||+|||++.++.+||+|||+++..... ..
T Consensus 247 ~~~l~~--~~~~l~~~~~~~i~~qi~~aL~yLH----~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 247 YTYLGA--RLRPLGLAQVTAVARQLLSAIDYIH----GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred HHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 988863 2346999999999999999999999 679999999999999999999999999998653221 12
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc------ch-hHHHHHHhhcccccccc----cHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF------NL-ATWVHSVVREEWTVEVF----DEVL 572 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~------~~-~~~~~~~~~~~~~~~~~----d~~~ 572 (626)
...++..|++||......++.++|||||||++|||++|..++.... .. .+..+.+.........+ ...+
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 2457889999999888888999999999999999999886543211 11 11111111111000000 0000
Q ss_pred Hhh-----------h----ccH---HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 573 IAE-----------A----ASE---ERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 573 ~~~-----------~----~~~---~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
... . ... .....+.+++.+||+.||++|||+.|+++.
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 0 000 111257789999999999999999999864
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=311.45 Aligned_cols=184 Identities=18% Similarity=0.220 Sum_probs=157.6
Q ss_pred cccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 350 PAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
..+.||+|+||.||+|... +++.||+|..... ....|+.++++++||||+++++++...+..++||||+. |+|
T Consensus 70 ~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l 143 (357)
T PHA03209 70 VIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDL 143 (357)
T ss_pred EEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcH
Confidence 3478999999999999954 5789999975432 34568999999999999999999999999999999995 689
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--ccccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QSFLA 506 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~~~~ 506 (626)
.+++.. ....+++..+..++.|++.||.||| +++||||||||+|||++.++.+||+|||+++..... .....
T Consensus 144 ~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 217 (357)
T PHA03209 144 YTYLTK--RSRPLPIDQALIIEKQILEGLRYLH----AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA 217 (357)
T ss_pred HHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence 888863 3457899999999999999999999 679999999999999999999999999998643222 22345
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCC
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQ 545 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~ 545 (626)
++..|++||......++.++|||||||++|||+++..++
T Consensus 218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 788899999988888899999999999999999976554
|
|
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-35 Score=296.73 Aligned_cols=238 Identities=17% Similarity=0.292 Sum_probs=191.1
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++..++..++||||+++++|
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSA 89 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcH
Confidence 6799999999999985 468899999987443 2235788999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---ccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---SFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~~~ 505 (626)
.+++.. ..+++..+..++.+++.|+.||| .++|+|+||+|+||++++++.++++|||++....... ...
T Consensus 90 ~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH----~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06642 90 LDLLKP----GPLEETYIATILREILKGLDYLH----SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred HHHhhc----CCCCHHHHHHHHHHHHHHHHHHh----cCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence 999853 45889999999999999999999 6899999999999999999999999999986533211 123
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++|||||||++|||+||+.|+...... ...... ..... + .........+
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~-~~~~~-----~-----~~~~~~~~~~ 229 (277)
T cd06642 162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM-RVLFLI-PKNSP-----P-----TLEGQYSKPF 229 (277)
T ss_pred cCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh-hHHhhh-hcCCC-----C-----CCCcccCHHH
Confidence 4567789999988777889999999999999999999998643221 111111 11100 0 0111233457
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+++.+||+.+|++||++.++++.
T Consensus 230 ~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 230 KEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHccCCcccCcCHHHHHHh
Confidence 889999999999999999999873
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=301.50 Aligned_cols=253 Identities=18% Similarity=0.222 Sum_probs=192.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||++.. .++..+|+|.+..... ..+++.+|++++++++||||+++++++..++..++||||+++++
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~ 85 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 85 (308)
T ss_pred EeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCc
Confidence 36799999999999984 4688999999875432 23568899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-Cccccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-DQSFLA 506 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~~~~~~ 506 (626)
|.++++. ...+++..+..++.|++.||.|||+ ..+|+||||||+|||+++++.+||+|||++..... ......
T Consensus 86 L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (308)
T cd06615 86 LDQVLKK---AGRIPENILGKISIAVLRGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 159 (308)
T ss_pred HHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---hCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCC
Confidence 9999963 2568899999999999999999994 25899999999999999999999999998764322 122335
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc---------------------
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV--------------------- 565 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------------------- 565 (626)
++..|++||...+..++.++|||||||++|||+||+.||.... ...............
T Consensus 160 ~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (308)
T cd06615 160 GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD-AKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA 238 (308)
T ss_pred CCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc-hhhHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence 6778999998877778899999999999999999999986332 111111111000000
Q ss_pred --ccccHHHHh--hhc-cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 566 --EVFDEVLIA--EAA-SEERMLKLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 566 --~~~d~~~~~--~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
+..+..... ... .......+.+++.+||+.+|++|||+.|+++.-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 239 IFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred HHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000000000 000 001234588999999999999999999998763
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=298.91 Aligned_cols=240 Identities=20% Similarity=0.329 Sum_probs=193.4
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||.|+||.||+|. ..+++.||+|.+..... ..+.+.+|+..++.++||||+++++++...+..++||||+++++|
T Consensus 24 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 103 (296)
T cd06655 24 YEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSL 103 (296)
T ss_pred EEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcH
Confidence 3679999999999998 46789999999875443 346788999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---ccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---SFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~~~ 505 (626)
.+++.. ..+++.++..++.+++.||+||| +.+|+||||||+||+++.++.+||+|||++....... ...
T Consensus 104 ~~~~~~----~~l~~~~~~~i~~~l~~al~~LH----~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 175 (296)
T cd06655 104 TDVVTE----TCMDEAQIAAVCRECLQALEFLH----ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTM 175 (296)
T ss_pred HHHHHh----cCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCc
Confidence 999853 35899999999999999999999 6799999999999999999999999999876432221 223
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++|||||||++|||+||+.||......... ....... .... .........+
T Consensus 176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~-~~~~~~~-~~~~--------~~~~~~~~~~ 245 (296)
T cd06655 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLIATNG-TPEL--------QNPEKLSPIF 245 (296)
T ss_pred CCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhcC-Cccc--------CCcccCCHHH
Confidence 4667899999887777889999999999999999999999754433222 1111111 0000 0111223357
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+++.+||+.||++||++.++++
T Consensus 246 ~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 246 RDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHHHHHHhhcChhhCCCHHHHhh
Confidence 78899999999999999999976
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=290.40 Aligned_cols=244 Identities=17% Similarity=0.288 Sum_probs=193.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.+|+|.+..... ..+.+.+|++++++++||||+++++++...+..+++|||+++++|
T Consensus 8 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l 87 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSL 87 (262)
T ss_pred EEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcH
Confidence 36799999999999985 4678999999876542 446789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++... ...++...+..++.|++.||.||| +.+|+|+||||+||++++++.+||+|||++...... ....
T Consensus 88 ~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh----~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (262)
T cd06613 88 QDIYQVT--RGPLSELQIAYVCRETLKGLAYLH----ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSF 161 (262)
T ss_pred HHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHH----hCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccc
Confidence 9998632 246889999999999999999999 679999999999999999999999999997653321 1223
Q ss_pred ccccccchhhccccC---CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 506 AQTSSLKINDISNQM---CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~---~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
.++..|++||..... .++.++|||||||++|||+||+.|+......... ............. .......
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~ 233 (262)
T cd06613 162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-FLISKSNFPPPKL-------KDKEKWS 233 (262)
T ss_pred cCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhccCCCccc-------cchhhhh
Confidence 456679999987665 6788999999999999999999998743322221 1111111000000 0112234
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.+|.+|||+.+|+.
T Consensus 234 ~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 234 PVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 46889999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=294.02 Aligned_cols=242 Identities=14% Similarity=0.244 Sum_probs=189.4
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
+.||+|+||.||+|.. .+++.||+|.++.... ....+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQ 94 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHH
Confidence 6799999999999984 5689999999875432 3356788999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~~ 506 (626)
+++.. ...+++.....++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... .....
T Consensus 95 ~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 167 (267)
T cd06645 95 DIYHV---TGPLSESQIAYVSRETLQGLYYLH----SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFI 167 (267)
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccccc
Confidence 99853 346899999999999999999999 679999999999999999999999999997543221 12335
Q ss_pred cccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 507 QTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 507 ~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
++..|++||... ...++.++|||||||++|||++|+.|+.......... .............. ......
T Consensus 168 ~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~-------~~~~~~ 239 (267)
T cd06645 168 GTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-LMTKSNFQPPKLKD-------KMKWSN 239 (267)
T ss_pred CcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH-hhhccCCCCCcccc-------cCCCCH
Confidence 677899999863 3456789999999999999999999986433222211 11111111100000 001123
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+++.+||+.+|++||+++++++
T Consensus 240 ~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 240 SFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHHHHHHccCCchhCcCHHHHhc
Confidence 4778999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=297.54 Aligned_cols=251 Identities=17% Similarity=0.236 Sum_probs=185.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccC---CCCCccccceEEEe-----CCeEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHV---KHPNVLPPLAYYCS-----KQEKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l---~H~nIv~l~g~~~~-----~~~~~l 418 (626)
.+.||+|+||.||+|.. .+++.||+|.++.... ....+.+|+++++.+ +||||+++++++.. ....++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l 84 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL 84 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence 46799999999999985 5689999999875431 234566777776655 79999999998764 245799
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+++ +|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...
T Consensus 85 v~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 85 VFEHVDQ-DLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLH----ANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred EEccccc-CHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 9999984 898888642 2345899999999999999999999 679999999999999999999999999998654
Q ss_pred CCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh-------cccccc---
Q 006903 499 NHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR-------EEWTVE--- 566 (626)
Q Consensus 499 ~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~-------~~~~~~--- 566 (626)
... .....++..|++||......++.++|||||||++|||++|++||........ ...+.. ..+...
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07863 159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIFDLIGLPPEDDWPRDVTL 237 (288)
T ss_pred cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH-HHHHHHHhCCCChhhCcccccc
Confidence 322 1233467789999998878889999999999999999999999864432211 111111 000000
Q ss_pred ---cccHHHH--hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 ---VFDEVLI--AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 ---~~d~~~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+... .....++....+.+++.+|++.||++|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 238 PRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000 00011122345789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=296.44 Aligned_cols=244 Identities=20% Similarity=0.290 Sum_probs=191.9
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||++... +++.||+|.++.... ..+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGS 85 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCC
Confidence 367999999999999965 789999998875322 23578899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-Cccccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-DQSFLA 506 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~~~~~~ 506 (626)
|..++........+++..+..++.+++.||.|||+ +.+|+||||||+||+++.++.+|++|||++..... ......
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (286)
T cd06622 86 LDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE---EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNI 162 (286)
T ss_pred HHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh---cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCC
Confidence 99998643333478999999999999999999994 35899999999999999999999999999865322 222234
Q ss_pred cccccchhhccccC------CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHH---HhhcccccccccHHHHhhhc
Q 006903 507 QTSSLKINDISNQM------CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHS---VVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 507 ~~~~~~~pe~~~~~------~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~ 577 (626)
++..|++||..... .++.++|||||||++|||+||+.||..... ...... ..... .. ..
T Consensus 163 ~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~-~~----------~~ 230 (286)
T cd06622 163 GCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY-ANIFAQLSAIVDGD-PP----------TL 230 (286)
T ss_pred CccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch-hhHHHHHHHHhhcC-CC----------CC
Confidence 56678999976433 347899999999999999999999864322 111111 11110 00 11
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.......+.+++.+||+.+|++||++++++..
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 231 PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 12234557889999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=291.40 Aligned_cols=240 Identities=17% Similarity=0.260 Sum_probs=199.3
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
+.||+|+||.||||.+ ..|+.+|||.+... ..-+++.+|+.+|++.+.|++|+++|.|.....+|+|||||..|++.+
T Consensus 39 ~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSD 117 (502)
T KOG0574|consen 39 GKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISD 117 (502)
T ss_pred HHhcCCcchHHHHHHHhccCcEEEEEecCcc-chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHH
Confidence 6799999999999984 56999999998753 455788999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Ccccccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSFLAQ 507 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~~~~ 507 (626)
.++.+ .++++..++-.+....++||+||| ...-||||||+.|||++.+|.+|++|||.+..... ....+.|
T Consensus 118 I~R~R--~K~L~E~EIs~iL~~TLKGL~YLH----~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIG 191 (502)
T KOG0574|consen 118 IMRAR--RKPLSEQEISAVLRDTLKGLQYLH----DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIG 191 (502)
T ss_pred HHHHh--cCCccHHHHHHHHHHHHhHHHHHH----HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcccc
Confidence 99853 468999999999999999999999 45679999999999999999999999999854332 3345678
Q ss_pred ccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHH
Q 006903 508 TSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQ 587 (626)
Q Consensus 508 ~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~ 587 (626)
++.||+||++..-.|..++||||+|++..||..|++|+.+-..+...+.. ..... +.-..+++....+-+
T Consensus 192 TPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI--PT~PP--------PTF~KPE~WS~~F~D 261 (502)
T KOG0574|consen 192 TPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI--PTKPP--------PTFKKPEEWSSEFND 261 (502)
T ss_pred CcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec--cCCCC--------CCCCChHhhhhHHHH
Confidence 99999999999999999999999999999999999998743322211100 00000 001124556677999
Q ss_pred HHhhccCCCCCCCCCHHHHHH
Q 006903 588 VALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 588 l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
++.+|+-..|++|-|+.++++
T Consensus 262 Fi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 262 FIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred HHHHHhcCCHHHHHHHHHHhh
Confidence 999999999999999988765
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=307.67 Aligned_cols=248 Identities=16% Similarity=0.230 Sum_probs=187.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||.||++.. .+++.||||++.... ...+.+.+|+.+++.++||||+++++++... ...++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~ 108 (364)
T cd07875 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108 (364)
T ss_pred EEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEE
Confidence 47899999999999984 468899999997543 2335678999999999999999999987543 3579999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++ +|.+++. ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 109 e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 109 ELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178 (364)
T ss_pred eCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHh----hCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence 99975 7777774 24788999999999999999999 67999999999999999999999999999875433
Q ss_pred Cc--cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc-c-cc---cccHH--
Q 006903 501 DQ--SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW-T-VE---VFDEV-- 571 (626)
Q Consensus 501 ~~--~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~-~~---~~d~~-- 571 (626)
.. ....++..|++||......++.++|||||||++|||++|+.||........+ ..+..... . .+ ...+.
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 257 (364)
T cd07875 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW-NKVIEQLGTPCPEFMKKLQPTVR 257 (364)
T ss_pred CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHhcCCCCHHHHHhhhHHHH
Confidence 21 2345678899999988888899999999999999999999999754333222 11111000 0 00 00000
Q ss_pred ----------------HHh-------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 572 ----------------LIA-------EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 572 ----------------~~~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
... ..........+.+++.+|++.||++|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000 00001112457899999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=298.11 Aligned_cols=251 Identities=18% Similarity=0.179 Sum_probs=190.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+|+.||+|+++.... ....+.+|++++++++||||+++++++.+.+..++|+||++ +
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 83 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-Q 83 (284)
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-C
Confidence 36799999999999995 4689999999865432 23567889999999999999999999999999999999997 5
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---S 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~ 503 (626)
+|.+++... ...+++.....++.||++||.||| +++|+||||||+||+++.++.+||+|||++....... .
T Consensus 84 ~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH----~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (284)
T cd07839 84 DLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCH----SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYS 157 (284)
T ss_pred CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcC
Confidence 888887532 346899999999999999999999 6799999999999999999999999999986432211 1
Q ss_pred ccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc---------c-------
Q 006903 504 FLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV---------E------- 566 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---------~------- 566 (626)
...++..|++||.... ..++.++|||||||++|||+||+.|+..+.+..+....+....... .
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY 237 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence 2234667999997654 3468899999999999999999998765555444333322110000 0
Q ss_pred -cccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 -VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 -~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
............+.....+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 238 PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000000000011122346788999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=300.27 Aligned_cols=240 Identities=21% Similarity=0.330 Sum_probs=192.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 103 (297)
T cd06656 24 FEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 103 (297)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCH
Confidence 46799999999999984 679999999987544 3346688999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++.. ..+++..+..++.+++.||.||| +.+|+||||||+||+++.++.++|+|||++...... ....
T Consensus 104 ~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH----~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 175 (297)
T cd06656 104 TDVVTE----TCMDEGQIAAVCRECLQALDFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 175 (297)
T ss_pred HHHHHh----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcc
Confidence 999853 35789999999999999999999 679999999999999999999999999997653222 1233
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|.+||......++.++|||||||++||++||+.||........... ..... .... ..+......+
T Consensus 176 ~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-~~~~~-~~~~--------~~~~~~~~~~ 245 (297)
T cd06656 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IATNG-TPEL--------QNPERLSAVF 245 (297)
T ss_pred cCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-eccCC-CCCC--------CCccccCHHH
Confidence 567789999988877788999999999999999999999864332211110 11000 0000 0111223447
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+++.+||+.+|++||+++++++
T Consensus 246 ~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 246 RDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHHHHHHccCChhhCcCHHHHhc
Confidence 78899999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=303.66 Aligned_cols=242 Identities=18% Similarity=0.279 Sum_probs=203.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC----CHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|.||.||+++.+ +|+.+|+|.+.+... ..+.+.+|+++|+++. |||||.+.+.|.+.+..++|||++.
T Consensus 40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~ 119 (382)
T KOG0032|consen 40 GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCE 119 (382)
T ss_pred hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecC
Confidence 478999999999999954 599999999976653 3368999999999998 9999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC----CCeEEeeccCccccCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN----MEPCISEYGLIVTENH 500 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGl~~~~~~ 500 (626)
||.|++.+... .++......++.|++.++.||| +.||+||||||+|+|+... +.+|++|||++.....
T Consensus 120 GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH----~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 120 GGELFDRIVKK----HYSERDAAGIIRQILEAVKYLH----SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred CchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHH----hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 99999999743 3899999999999999999999 6899999999999999753 4799999999987655
Q ss_pred --CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 501 --DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 501 --~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
......|++.|++||......|+..+||||.||++|.|++|.+||.......... .+....+. +.+ ...
T Consensus 192 ~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~i~~~~~~--f~~------~~w 262 (382)
T KOG0032|consen 192 GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-AILRGDFD--FTS------EPW 262 (382)
T ss_pred CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-HHHcCCCC--CCC------CCc
Confidence 3356789999999999998999999999999999999999999998655433332 33333321 111 122
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+.....+.+++..++..||.+|+|+.++++.
T Consensus 263 ~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 263 DDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred cccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 2334567889999999999999999999885
|
|
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=295.35 Aligned_cols=245 Identities=18% Similarity=0.286 Sum_probs=189.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEE-----eCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYC-----SKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~-----~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||++.. .+++.+|+|.+.......+++.+|+.+++++ +||||+++++++. ..+..++||||+
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 102 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELC 102 (286)
T ss_pred eeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeec
Confidence 36799999999999985 4688999999876544556788999999999 6999999999874 345689999999
Q ss_pred CCCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 424 PNGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 424 ~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
++|+|.++++.. .....+++..+..++.|++.||.||| +.+|+||||||+||++++++.+|++|||++......
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~ 178 (286)
T cd06638 103 NGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH----VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR 178 (286)
T ss_pred CCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH----hCCccccCCCHHhEEECCCCCEEEccCCceeecccCC
Confidence 999999987532 22356889999999999999999999 679999999999999999999999999998653321
Q ss_pred --ccccccccccchhhcccc-----CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 502 --QSFLAQTSSLKINDISNQ-----MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~-----~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
.....++..|++||.... ..++.++|||||||++|||++|+.|+........... ..... .....+
T Consensus 179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~-~~~~~-~~~~~~----- 251 (286)
T cd06638 179 LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK-IPRNP-PPTLHQ----- 251 (286)
T ss_pred CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh-ccccC-CCcccC-----
Confidence 122346778999997642 3467899999999999999999999875433222211 11110 000000
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+......+.+++.+||+.||++|||+.|+++.
T Consensus 252 ---~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 252 ---PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ---CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 01122357889999999999999999999875
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=310.52 Aligned_cols=247 Identities=14% Similarity=0.191 Sum_probs=187.5
Q ss_pred ccccccCCCcceEEEEeC---CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD---DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||++... ++..||+|.+... ....+|++++++++|||||++++++......++||||+. ++
T Consensus 97 ~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 171 (392)
T PHA03207 97 LSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CD 171 (392)
T ss_pred EEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CC
Confidence 478999999999999743 3678999988643 345789999999999999999999999999999999996 68
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-----c
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-----Q 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-----~ 502 (626)
|.+++. ....+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... .
T Consensus 172 l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH----~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~ 244 (392)
T PHA03207 172 LFTYVD---RSGPLPLEQAITIQRRLLEALAYLH----GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQC 244 (392)
T ss_pred HHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccc
Confidence 988883 3357899999999999999999999 679999999999999999999999999998643221 1
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc--hhHHHHHHhhccc--ccccc---cHHH---
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN--LATWVHSVVREEW--TVEVF---DEVL--- 572 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~--~~~~~---d~~~--- 572 (626)
....++..|++||......++.++|||||||++|||++|+.||..... ....+..+..... ..+.. ...+
T Consensus 245 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 324 (392)
T PHA03207 245 YGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKH 324 (392)
T ss_pred cccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHH
Confidence 234578889999999888889999999999999999999999864321 1111111111000 00000 0000
Q ss_pred --------Hhhhcc------HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 573 --------IAEAAS------EERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 573 --------~~~~~~------~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...... ......+.+++.+||..||++|||+.|++..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 325 FKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 0112346788999999999999999999874
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=296.09 Aligned_cols=241 Identities=17% Similarity=0.275 Sum_probs=189.8
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
+.||+|+||.||+|.. .+++.+|+|.+..... ..+.+.+|+++++.++||||+++++.+..++..++||||+++++|.
T Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 97 (292)
T cd06644 18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVD 97 (292)
T ss_pred heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHH
Confidence 6799999999999995 4589999999876442 3457889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~~ 506 (626)
.++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... .....
T Consensus 98 ~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 171 (292)
T cd06644 98 AIMLEL--DRGLTEPQIQVICRQMLEALQYLH----SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFI 171 (292)
T ss_pred HHHHhh--cCCCCHHHHHHHHHHHHHHHHHHh----cCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceec
Confidence 887532 346899999999999999999999 679999999999999999999999999987543221 12234
Q ss_pred cccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 507 QTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 507 ~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
++..|++||... ...++.++|||||||++|||++|+.|+..... .+........... .. ......
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~~-~~--------~~~~~~ 241 (292)
T cd06644 172 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-MRVLLKIAKSEPP-TL--------SQPSKW 241 (292)
T ss_pred CCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-HHHHHHHhcCCCc-cC--------CCCccc
Confidence 567799999763 33457899999999999999999999864322 2222222211110 00 011122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.+|++||+++|+++
T Consensus 242 ~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 242 SMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 345788999999999999999999976
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=300.90 Aligned_cols=190 Identities=19% Similarity=0.278 Sum_probs=155.2
Q ss_pred ccccccCCCcceEEEEeC---CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEe--CCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD---DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS--KQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~--~~~~~lv~Ey~~~ 425 (626)
+..||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 467999999999999854 45789999987543 33467899999999999999999998854 4567999999875
Q ss_pred CChhHhhcCC------CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee----CCCCCeEEeeccCc
Q 006903 426 GSLFNLLHGS------ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF----NNNMEPCISEYGLI 495 (626)
Q Consensus 426 g~L~~~l~~~------~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGl~ 495 (626)
+|.+++... .....+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++.+||+|||++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH----hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 787776421 11235889999999999999999999 6799999999999999 56678999999998
Q ss_pred cccCCC------ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCC
Q 006903 496 VTENHD------QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQN 546 (626)
Q Consensus 496 ~~~~~~------~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~ 546 (626)
+..... .....++..|++||.... ..++.++|||||||++|||+||++||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 754321 122356778999998755 457889999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=309.03 Aligned_cols=236 Identities=18% Similarity=0.207 Sum_probs=181.9
Q ss_pred cccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccC---CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 354 LGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHV---KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 354 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l---~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
||+|+||.||+|+. .+++.||||++..... ....+..|..++.+. +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999985 5689999999865321 112345566666554 699999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~ 502 (626)
|+|.+++.. ...+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||++..... ..
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH----~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~ 153 (330)
T cd05586 81 GELFWHLQK---EGRFSEDRAKFYIAELVLALEHLH----KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTT 153 (330)
T ss_pred ChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCc
Confidence 999999853 346899999999999999999999 67999999999999999999999999999864321 12
Q ss_pred cccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 SFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||.... ..++.++|||||||++|||+||+.||... +..+....+...... .. .. ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~--~~-----~~----~~ 221 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE-DTQQMYRNIAFGKVR--FP-----KN----VL 221 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC-CHHHHHHHHHcCCCC--CC-----Cc----cC
Confidence 23457888999998754 34789999999999999999999998743 223333332222111 00 00 11
Q ss_pred HHHHHHHHhhccCCCCCCCCC----HHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPS----MNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs----~~ev~~ 608 (626)
...+.+++.+||+.||++||+ +.++++
T Consensus 222 ~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 222 SDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 234678899999999999984 555544
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-35 Score=329.53 Aligned_cols=251 Identities=18% Similarity=0.239 Sum_probs=193.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|.. .++..||+|.+..... ....+..|+.++++++|||||+++++|... ...|+||||++
T Consensus 18 l~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~ 97 (1021)
T PTZ00266 18 IKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCD 97 (1021)
T ss_pred EEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCC
Confidence 47899999999999984 4678999999875432 235688999999999999999999988653 56899999999
Q ss_pred CCChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhc---cCCCceeccCCCCCeeeCC-----------------
Q 006903 425 NGSLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEEL---REDGIAHGNLKSNNILFNN----------------- 483 (626)
Q Consensus 425 ~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~---~~~~ivHrDlkp~NILl~~----------------- 483 (626)
+|+|.+++.... ....+++..++.|+.||+.||.|||... ...+||||||||+|||++.
T Consensus 98 gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng 177 (1021)
T PTZ00266 98 AGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNG 177 (1021)
T ss_pred CCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCC
Confidence 999999996421 2346999999999999999999999531 0146999999999999964
Q ss_pred CCCeEEeeccCccccCCC--ccccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHh
Q 006903 484 NMEPCISEYGLIVTENHD--QSFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 484 ~~~~kl~DFGl~~~~~~~--~~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~ 559 (626)
...+||+|||++...... .....+++.|++||++.. ..++.++|||||||++|||+||+.||.........+..+.
T Consensus 178 ~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk 257 (1021)
T PTZ00266 178 RPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELK 257 (1021)
T ss_pred CCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHh
Confidence 234899999998654322 223457889999998743 4578899999999999999999999976555444443332
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhh
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNI 613 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i 613 (626)
..... .. ......+.+|+..||+.+|.+||++.|++. .+..+
T Consensus 258 ~~p~l--------pi----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 258 RGPDL--------PI----KGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred cCCCC--------Cc----CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 21100 00 111235788999999999999999999984 45444
|
|
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=292.00 Aligned_cols=246 Identities=18% Similarity=0.295 Sum_probs=192.7
Q ss_pred cccccCCCcceEEEEeC------CCcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 352 ELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
..||+|+||.||+|+.. +.+.||+|.+...... .+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYT 90 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEec
Confidence 67999999999999853 3467999988764432 467999999999999999999999999888999999999
Q ss_pred CCCChhHhhcCCCCC------CCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 424 PNGSLFNLLHGSENG------QSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~------~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
++|+|.+++...... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++|||++..
T Consensus 91 ~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH----~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~ 166 (275)
T cd05046 91 DLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS----NARFVHRDLAARNCLVSSQREVKVSLLSLSKD 166 (275)
T ss_pred CCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh----hcCcccCcCccceEEEeCCCcEEEcccccccc
Confidence 999999999643321 26899999999999999999999 67999999999999999999999999999764
Q ss_pred cCCCc----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 498 ENHDQ----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 498 ~~~~~----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
..... ....++..|++||.......+.++||||||+++|||++ |..||... .....+...........
T Consensus 167 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~-~~~~~~~~~~~~~~~~~------ 239 (275)
T cd05046 167 VYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGL-SDEEVLNRLQAGKLELP------ 239 (275)
T ss_pred cCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc-chHHHHHHHHcCCcCCC------
Confidence 32211 11223456899998776677889999999999999999 77777532 22222222221111110
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
........+.+++.+||+.+|++|||+.|+++.|++
T Consensus 240 ----~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 240 ----VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred ----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 011223458889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=292.74 Aligned_cols=238 Identities=18% Similarity=0.295 Sum_probs=192.5
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSA 89 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcH
Confidence 6799999999999985 468899999987543 2235788999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++.. ..+++.....++.+++.||+|+| +.+++|+||+|+||+++.++.++++|||++...... ....
T Consensus 90 ~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh----~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06640 90 LDLLRA----GPFDEFQIATMLKEILKGLDYLH----SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred HHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccc
Confidence 999853 35888999999999999999999 679999999999999999999999999998543321 1223
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|.+||.......+.++|||||||++|||+||+.|+...... ........ ... +.........+
T Consensus 162 ~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~~~-~~~----------~~~~~~~~~~~ 229 (277)
T cd06640 162 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-RVLFLIPK-NNP----------PTLTGEFSKPF 229 (277)
T ss_pred cCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-hHhhhhhc-CCC----------CCCchhhhHHH
Confidence 4566789999887777889999999999999999999998643221 11111111 100 11223345568
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+++.+||+.+|++||++.++++.
T Consensus 230 ~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 230 KEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHcccCcccCcCHHHHHhC
Confidence 899999999999999999999775
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=288.80 Aligned_cols=243 Identities=21% Similarity=0.371 Sum_probs=193.6
Q ss_pred ccccccCCCcceEEEEeCC-----CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLDD-----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~-----g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||++...+ +..||+|.++.... ..+.+..|++.++.++|+||+++++++...+..+++|||+
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~ 83 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYM 83 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEecc
Confidence 3679999999999998643 38899999976543 3568999999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS 503 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~ 503 (626)
++++|.+++.... ...+++..+..++.|++.||+||| +.+++||||||+||++++++.++++|||++........
T Consensus 84 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lh----~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 84 EGGDLLDYLRKNR-PKELSLSDLLSFALQIARGMEYLE----SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred CCCCHHHHHHhhh-hccCCHHHHHHHHHHHHHHHHHHh----cCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 9999999996422 122899999999999999999999 67999999999999999999999999999865433211
Q ss_pred c----cccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 504 F----LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 504 ~----~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
. ..++..|++||......++.++||||+|+++|||++ |+.|+.. .+.............. .. .
T Consensus 159 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~----------~ 226 (258)
T smart00219 159 YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPG-MSNEEVLEYLKKGYRL-PK----------P 226 (258)
T ss_pred cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHhcCCCC-CC----------C
Confidence 1 124567899998877778999999999999999999 6777653 3333333333222111 10 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
......+.+++.+|+..+|++|||+.|+++.|
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 227 ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11234588899999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=297.37 Aligned_cols=257 Identities=18% Similarity=0.194 Sum_probs=191.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .+++.||+|.++... .....+.+|++++++++||||+++++++..++..++||||++ ++
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~ 89 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 89 (301)
T ss_pred eeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cC
Confidence 36799999999999985 468899999986543 234567899999999999999999999999999999999997 58
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---SF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~~ 504 (626)
|.+++... ...+++..+..++.|++.||.||| +++|+||||||+||++++++.+||+|||++....... ..
T Consensus 90 l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (301)
T cd07873 90 LKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCH----RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSN 163 (301)
T ss_pred HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccc
Confidence 99988642 346889999999999999999999 6899999999999999999999999999986432211 12
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc---c---ccccccc--------
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE---E---WTVEVFD-------- 569 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~---~---~~~~~~d-------- 569 (626)
..++..|++||.... ..++.++|||||||++|||+||+.||..... .+........ . ......+
T Consensus 164 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (301)
T cd07873 164 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV-EEQLHFIFRILGTPTEETWPGILSNEEFKSYN 242 (301)
T ss_pred cceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCChhhchhhhccccccccc
Confidence 234678999997654 3468899999999999999999999874322 2222211110 0 0000000
Q ss_pred -HHHHh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhh
Q 006903 570 -EVLIA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIKE 615 (626)
Q Consensus 570 -~~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~~ 615 (626)
+.... ..........+.+++.+|++.||++|||++|+++ .++.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~ 294 (301)
T cd07873 243 YPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE 294 (301)
T ss_pred cCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 00000 0000112335778999999999999999999987 4544443
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=293.06 Aligned_cols=245 Identities=20% Similarity=0.323 Sum_probs=190.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---C--------HHHHHHHHHHhccCCCCCccccceEEEeCCeEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---S--------SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~--------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~l 418 (626)
.+.||+|+||.||+|.. .+|+.||+|.++.... . .+.+.+|+++++.++||||+++++++...+..++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSI 85 (272)
T ss_pred cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEE
Confidence 47899999999999984 5689999998864211 1 1357889999999999999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+++|+|.++++.. ..+++..+..++.+++.||.||| +++++||||||+||+++.++.++++|||++...
T Consensus 86 v~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 86 FLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLH----SKGILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred EEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHh----hCCeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 99999999999999642 46899999999999999999999 679999999999999999999999999998643
Q ss_pred CCC-----ccccccccccchhhccccCC--CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHH
Q 006903 499 NHD-----QSFLAQTSSLKINDISNQMC--STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 499 ~~~-----~~~~~~~~~~~~pe~~~~~~--~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
... .....++..|++||...... ++.++||||||+++||+++|+.|+........... ........ .+..
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~-~~~~- 235 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFK-LGNKRSAP-PIPP- 235 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHH-hhccccCC-cCCc-
Confidence 221 11234566789999866543 68899999999999999999999865433322221 11111011 1111
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
....+....+.+++.+||+.+|++||++.||++.
T Consensus 236 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 236 ----DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ----cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 0111234568889999999999999999999763
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=293.85 Aligned_cols=251 Identities=16% Similarity=0.228 Sum_probs=189.4
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
...||+|+||.||+|... +++.||+|++.... ...+.+.+|++++++++||||+++++++......++||||++++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 85 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHT 85 (286)
T ss_pred eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCcc
Confidence 367999999999999965 68999999886433 23356889999999999999999999999999999999999998
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---S 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~ 503 (626)
.|..+... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++....... .
T Consensus 86 ~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 86 VLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCH----KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred HHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 88887742 346899999999999999999999 6799999999999999999999999999986543221 1
Q ss_pred ccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH--HHhhc------------ccccccc
Q 006903 504 FLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH--SVVRE------------EWTVEVF 568 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~--~~~~~------------~~~~~~~ 568 (626)
...++..|++||.... ..++.++|||||||++|||+||+.||........... ..... .+.....
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 2345677899997654 4568899999999999999999999874433211111 00000 0000000
Q ss_pred cHHHHh----hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 569 DEVLIA----EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 569 d~~~~~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.... ....+.....+.+++.+||+.+|++||++.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000 0000112345889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=288.79 Aligned_cols=242 Identities=19% Similarity=0.288 Sum_probs=192.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEe-CCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCS-KQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++.. .+++.||+|++..... ..+.+.+|++++++++|+|++++++.+.. ....+++|||+++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~ 84 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEG 84 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCC
Confidence 46899999999999984 4578999999865432 23568899999999999999999988764 4467899999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---c
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---Q 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~ 502 (626)
++|.+++... ....+++.+++.++.+++.|++||| +.+|+||||||+||+++.++.++|+|||++...... .
T Consensus 85 ~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH----~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 159 (257)
T cd08223 85 GDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLH----EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA 159 (257)
T ss_pred CcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence 9999999742 2346899999999999999999999 679999999999999999999999999997643221 1
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||++|+.||... +............ ... ......
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~-~~~~~~~~~~~~~-~~~----------~~~~~~ 227 (257)
T cd08223 160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK-DMNSLVYRIIEGK-LPP----------MPKDYS 227 (257)
T ss_pred ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHhcC-CCC----------CccccC
Confidence 2234567899999988888889999999999999999999998633 3333333322211 100 112233
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+.+++.+||+.+|++||++.++++.
T Consensus 228 ~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 228 PELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 458899999999999999999999753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=297.52 Aligned_cols=240 Identities=18% Similarity=0.270 Sum_probs=191.1
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
..||+|+||.||++.. .++..||||.+.... ...+.+.+|+..++.++||||+++++.+...+..++||||+++++|.
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT 107 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence 5699999999999985 468999999986543 23456889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~~~ 506 (626)
+++.. ..+++..+..++.+++.||.||| +++|+||||||+||++++++.++|+|||++..... ......
T Consensus 108 ~~~~~----~~l~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~ 179 (292)
T cd06658 108 DIVTH----TRMNEEQIATVCLSVLRALSYLH----NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLV 179 (292)
T ss_pred HHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceee
Confidence 98852 35889999999999999999999 67999999999999999999999999999754321 112234
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
++..|++||......++.++|||||||++|||++|+.||....... .+..... ...... .. .......+.
T Consensus 180 ~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~-~~~~~~-----~~---~~~~~~~~~ 249 (292)
T cd06658 180 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-AMRRIRD-NLPPRV-----KD---SHKVSSVLR 249 (292)
T ss_pred cCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHh-cCCCcc-----cc---ccccCHHHH
Confidence 6778999999877788999999999999999999999987543221 1111111 100000 00 011223477
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 006903 587 QVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+++.+||..||++|||++|+++.
T Consensus 250 ~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 250 GFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHccCChhHCcCHHHHhhC
Confidence 88889999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=294.48 Aligned_cols=242 Identities=19% Similarity=0.301 Sum_probs=191.1
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
+.||+|+||.||++.. .++..+|+|.+.... ...+.+.+|++++++++||||+++++++..++..++||||+++++|.
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALD 90 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHH
Confidence 6799999999999985 468999999987543 23357889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~~~ 506 (626)
+++... ...+++.....++.|++.||.||| +.+|+||||||+||+++.++.++|+|||++..... ......
T Consensus 91 ~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh----~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 164 (280)
T cd06611 91 SIMLEL--ERGLTEPQIRYVCRQMLEALNFLH----SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFI 164 (280)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceee
Confidence 998632 346899999999999999999999 67999999999999999999999999998754322 122234
Q ss_pred cccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 507 QTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 507 ~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
++..|++||... ...++.++|||||||++|||++|+.||.... ..+............ + ..+...
T Consensus 165 ~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~--~-------~~~~~~ 234 (280)
T cd06611 165 GTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN-PMRVLLKILKSEPPT--L-------DQPSKW 234 (280)
T ss_pred cchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC-HHHHHHHHhcCCCCC--c-------CCcccC
Confidence 677789999753 3345779999999999999999999986432 222222222211100 0 011122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...+.+++.+||+.+|++||++.++++.
T Consensus 235 ~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 235 SSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 3357889999999999999999999774
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=289.27 Aligned_cols=240 Identities=21% Similarity=0.292 Sum_probs=191.3
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|+++++.++|+||+++++++...+..+++|||+
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELV 84 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEec
Confidence 368999999999999965 789999998865331 2356889999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-- 501 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-- 501 (626)
++++|.+++.. ...+++..+..++.+++.||+||| +.+|+|+||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~ 157 (258)
T cd06632 85 PGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLH----DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF 157 (258)
T ss_pred CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEccCccceecccccc
Confidence 99999999963 245889999999999999999999 679999999999999999999999999997653322
Q ss_pred ccccccccccchhhccccCC-CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 502 QSFLAQTSSLKINDISNQMC-STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~-~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
.....++..|++||...... ++.++|+|||||++|||++|+.||...... +............. .+..
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~----------~~~~ 226 (258)
T cd06632 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV-AAVFKIGRSKELPP----------IPDH 226 (258)
T ss_pred ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH-HHHHHHHhcccCCC----------cCCC
Confidence 12344667789999876555 788999999999999999999998754322 22222111111100 1112
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....+.+++.+||+.+|++||++.+++.
T Consensus 227 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 227 LSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred cCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 2345778899999999999999999975
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=290.62 Aligned_cols=247 Identities=19% Similarity=0.316 Sum_probs=190.1
Q ss_pred ccccccCCCcceEEEEeC----CCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCC------eEE
Q 006903 351 AELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ------EKL 417 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~------~~~ 417 (626)
.+.||+|+||.||+|... +++.||||.+...... .+++.+|++++++++||||+++++++...+ ..+
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPM 83 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceE
Confidence 367999999999999843 4689999998764322 356889999999999999999999876532 247
Q ss_pred EEEeecCCCChhHhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccC
Q 006903 418 LVYEYQPNGSLFNLLHGSE---NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL 494 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 494 (626)
+++||+++|+|.+++.... ....+++...+.++.|++.||+||| +++|+||||||+||++++++.+|++|||+
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 84 VILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS----SKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred EEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeecccchhhEEEcCCCCEEECcccc
Confidence 8999999999998874321 2235788999999999999999999 67999999999999999999999999999
Q ss_pred ccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 495 IVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 495 ~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
++...... .....+..|++||......++.++|||||||++|||++ |+.|+... +..+............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~--- 235 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV-ENSEIYNYLIKGNRLK--- 235 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCC-CHHHHHHHHHcCCcCC---
Confidence 86532211 11223456788888777778899999999999999999 77777533 3233222222211110
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
........+.+++.+||+.+|++||++.++++.|+++
T Consensus 236 --------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 236 --------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred --------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0112234688999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=308.60 Aligned_cols=243 Identities=18% Similarity=0.245 Sum_probs=188.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~g 127 (371)
T cd05622 48 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 127 (371)
T ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 47899999999999985 468899999986432 1234578899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---- 501 (626)
|+|.+++.. ..++...+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||++......
T Consensus 128 g~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~ 199 (371)
T cd05622 128 GDLVNLMSN----YDVPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 199 (371)
T ss_pred CcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHH----HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCccc
Confidence 999999853 24788888999999999999999 689999999999999999999999999998654322
Q ss_pred ccccccccccchhhccccC----CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 502 QSFLAQTSSLKINDISNQM----CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~----~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
.....++..|++||..... .++.++|||||||++|||++|+.||... +.......+..........+
T Consensus 200 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~~~-------- 270 (371)
T cd05622 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPD-------- 270 (371)
T ss_pred ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCcccCCC--------
Confidence 1234578899999987543 3678999999999999999999999743 33333333332211111111
Q ss_pred cHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNE--RPSMNQVAVMI 610 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~--RPs~~ev~~~L 610 (626)
.......+.+++.+|+..++.+ ||+++|+++..
T Consensus 271 ~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 271 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 0112334778888999844433 78999988753
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=290.31 Aligned_cols=247 Identities=21% Similarity=0.355 Sum_probs=194.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||.|+||.||+|.. .++..+|+|++.... ...+.+.+|++.++.++|+||+++++.+...+..++||||+++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~ 85 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGS 85 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCc
Confidence 46799999999999984 468899999987543 234678999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-----
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----- 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----- 502 (626)
|.++++.......+++.....++.|++.||+||| +.+|+||||||+||++++++.++++|||++.......
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh----~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 161 (267)
T cd06610 86 LLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH----SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRK 161 (267)
T ss_pred HHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccccc
Confidence 9999975333356899999999999999999999 6899999999999999999999999999975432211
Q ss_pred --cccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 503 --SFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
....++..|++||..... ..+.++|||||||++|||++|+.||........ ........... .. ......
T Consensus 162 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~--~~----~~~~~~ 234 (267)
T cd06610 162 VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-LMLTLQNDPPS--LE----TGADYK 234 (267)
T ss_pred ccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-HHHHhcCCCCC--cC----Cccccc
Confidence 223467788999987655 678999999999999999999999875433222 22222111100 00 000011
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+.+++.+||+.||++||++.|+++
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 235 KYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 22345789999999999999999999976
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=309.30 Aligned_cols=242 Identities=19% Similarity=0.233 Sum_probs=187.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++.. .+++.||+|+++... ...+.+.+|+.++..++||||+++++.+.+.+..++||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~g 85 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPG 85 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence 37899999999999985 468999999987532 2235678899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---- 501 (626)
|+|.+++.. ...+++.....++.|++.||.||| ++||+||||||+|||++.++.+||+|||++......
T Consensus 86 g~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH----~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 86 GDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIH----QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred ccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999953 346889999999999999999999 689999999999999999999999999987532110
Q ss_pred ----------------------------------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCC
Q 006903 502 ----------------------------------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNN 547 (626)
Q Consensus 502 ----------------------------------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~ 547 (626)
.....++..|++||+.....++.++|||||||++|||+||+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 0123578889999998888889999999999999999999999975
Q ss_pred CcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCC---HHHHHHH
Q 006903 548 GFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPS---MNQVAVM 609 (626)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~ev~~~ 609 (626)
... ......+......... .+ .. .....+.+++.+++ .||.+|++ +.|+++.
T Consensus 239 ~~~-~~~~~~i~~~~~~~~~-p~----~~---~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 239 ETP-QETYRKVMNWKETLVF-PP----EV---PISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCH-HHHHHHHHcCCCceec-CC----CC---CCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 432 2222222221111100 00 00 01224566666765 49999985 5666553
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=296.15 Aligned_cols=240 Identities=17% Similarity=0.263 Sum_probs=192.1
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
..||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+.+++.++||||+++++++..++..++||||+++++|.
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 106 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT 106 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence 4699999999999985 468999999986543 34467889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~~~ 506 (626)
+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..... ......
T Consensus 107 ~~~~~----~~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~ 178 (297)
T cd06659 107 DIVSQ----TRLNEEQIATVCESVLQALCYLH----SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV 178 (297)
T ss_pred HHHhh----cCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccccccccee
Confidence 98743 35889999999999999999999 67999999999999999999999999999754322 122345
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
++..|++||......++.++|||||||++|||++|+.||...... +......... .... . ........+.
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~-~~~~-~-------~~~~~~~~l~ 248 (297)
T cd06659 179 GTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV-QAMKRLRDSP-PPKL-K-------NAHKISPVLR 248 (297)
T ss_pred cCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhccC-CCCc-c-------ccCCCCHHHH
Confidence 677899999988777899999999999999999999998743322 2222221110 0000 0 0011223477
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 006903 587 QVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+++.+||+.+|++||++.++++.
T Consensus 249 ~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 249 DFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHhcCCcccCcCHHHHhhC
Confidence 88999999999999999999884
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=302.29 Aligned_cols=245 Identities=17% Similarity=0.212 Sum_probs=186.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+++. .+++.||+|.+.... ...+.+.+|+.++..++|+||+++++++.+++..++||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g 85 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVG 85 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCC
Confidence 47899999999999995 468999999986432 2234588899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++.. ....+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||++.......
T Consensus 86 ~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 86 GDLLTLLSK--FEDRLPEDMARFYLAEMVLAIDSVH----QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred CcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH----hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 999999963 2346889999999999999999999 6899999999999999999999999999986432211
Q ss_pred -cccccccccchhhcccc-----CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 -SFLAQTSSLKINDISNQ-----MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~-----~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
....++..|++||.... ..++.++|||||||++|||++|+.||... +..+....+...........
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~------- 231 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHKEHFQFPP------- 231 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC-CHHHHHHHHHcCCCcccCCC-------
Confidence 22357888999998752 34678999999999999999999999743 33333333322211111100
Q ss_pred ccHHHHHHHHHHHhhccCC--CCCCCCCHHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQ--SPNERPSMNQVAVM 609 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~--dP~~RPs~~ev~~~ 609 (626)
........+.+++.+|+.. ++..||+++++++.
T Consensus 232 ~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 232 DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0011223456666676644 44448899998775
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=291.81 Aligned_cols=238 Identities=19% Similarity=0.296 Sum_probs=192.1
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.||.|+||.||+|.. .+++.||+|.+.... .....+.+|+++++.++|+||+++++++..+...++|+||+++++|
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 86 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSC 86 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcH
Confidence 6799999999999985 468999999987543 2235688999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++.. ..+++..+..++.|++.|+.||| +.+|+||||+|+||++++++.++++|||+++..... ....
T Consensus 87 ~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh----~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (274)
T cd06609 87 LDLLKP----GKLDETYIAFILREVLLGLEYLH----EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTF 158 (274)
T ss_pred HHHHhh----cCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccc
Confidence 999963 27899999999999999999999 679999999999999999999999999998654322 2233
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++|||||||++|||+||+.||.... ........... ....... ......+
T Consensus 159 ~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~-~~~~~~~~~~~-~~~~~~~---------~~~~~~~ 227 (274)
T cd06609 159 VGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH-PMRVLFLIPKN-NPPSLEG---------NKFSKPF 227 (274)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCc-hHHHHHHhhhc-CCCCCcc---------cccCHHH
Confidence 45667999999887778999999999999999999999986432 12221111111 1111000 0023357
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+++.+||..+|++|||++++++
T Consensus 228 ~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 228 KDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHHHHHHhhCChhhCcCHHHHhh
Confidence 88999999999999999999976
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=294.54 Aligned_cols=251 Identities=17% Similarity=0.216 Sum_probs=190.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC------HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS------SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+++.||||+++..... ...+..|++++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM 84 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc
Confidence 36799999999999985 46899999999765422 345678999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
+|+|.+++.... ..+++..+..++.|+++||.||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 85 -~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 85 -ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLH----SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR 157 (298)
T ss_pred -CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence 899999996422 36899999999999999999999 6799999999999999999999999999986543321
Q ss_pred --cccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc------------ccc
Q 006903 503 --SFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT------------VEV 567 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~------------~~~ 567 (626)
....++..|.+||.... ..++.++|||||||++|||++|.++|....+.... ......... ...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 236 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQL-GKIFEALGTPTEENWPGVTSLPDY 236 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHH-HHHHHHcCCCchhhhhhccccccc
Confidence 11234566899997643 45688999999999999999997777643332221 111110000 000
Q ss_pred ccHH----HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 568 FDEV----LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 568 ~d~~----~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.... .............+.+++.+||+.+|++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 237 VEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000 00000111224568899999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=289.37 Aligned_cols=239 Identities=18% Similarity=0.239 Sum_probs=184.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC------CHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .++..||+|++..... ..+.+.+|++++++++||||+++++++... ...+++||
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e 86 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFME 86 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEe
Confidence 47899999999999985 5689999998864321 124578899999999999999999988753 56789999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH- 500 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~- 500 (626)
|+++++|.+++.. ...+++...+.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 87 ~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH----~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd06651 87 YMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLH----SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 159 (266)
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence 9999999999963 235889999999999999999999 67999999999999999999999999999764321
Q ss_pred -----CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 501 -----DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 501 -----~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
......++..|++||......++.++|||||||++|||+||+.||......... ......... +
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~-~~~~~~~~~-----~----- 228 (266)
T cd06651 160 CMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAI-FKIATQPTN-----P----- 228 (266)
T ss_pred cccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHH-HHHhcCCCC-----C-----
Confidence 111234567799999887777889999999999999999999998754332222 221111110 0
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+......+.+++ +||..+|++||+++||++
T Consensus 229 ~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 229 QLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 01111122344555 788899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=293.59 Aligned_cols=245 Identities=21% Similarity=0.299 Sum_probs=189.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeC-----CeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSK-----QEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~-----~~~~lv~Ey~ 423 (626)
.+.||+|+||.||++.. .+++.+|+|.+.......+.+.+|+.+++++ +|||++++++++... +..++||||+
T Consensus 27 ~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~ 106 (291)
T cd06639 27 IETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELC 106 (291)
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEEC
Confidence 36799999999999985 5689999999876544556788999999998 899999999998754 3589999999
Q ss_pred CCCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 424 PNGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 424 ~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
++|+|.++++.. .....+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 107 ~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~ 182 (291)
T cd06639 107 NGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH----NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR 182 (291)
T ss_pred CCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEEcCCCCEEEeecccchhccccc
Confidence 999999988632 12356899999999999999999999 679999999999999999999999999997643221
Q ss_pred --ccccccccccchhhccccC-----CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 502 --QSFLAQTSSLKINDISNQM-----CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~~-----~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
.....++..|++||..... .++.++|||||||++|||++|+.|+.......... ...... .....
T Consensus 183 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~-~~~~~~-~~~~~------ 254 (291)
T cd06639 183 LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLF-KIPRNP-PPTLL------ 254 (291)
T ss_pred ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHH-HHhcCC-CCCCC------
Confidence 1223456779999976432 25789999999999999999999987543222211 111111 00110
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+.....+.+++.+||+.+|++||++.|+++.
T Consensus 255 --~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 255 --HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred --cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 111223458889999999999999999999763
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=294.78 Aligned_cols=251 Identities=18% Similarity=0.269 Sum_probs=189.9
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+++++.++||||+++++++..++..++||||++++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHT 85 (286)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCcc
Confidence 378999999999999965 589999999865432 2457889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---S 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~ 503 (626)
+|.++... ...++|..++.++.|++.||+||| +.+|+||||+|+||++++++.++++|||++....... .
T Consensus 86 ~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 86 VLDDLEKY---PNGLDESRVRKYLFQILRGIEFCH----SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred HHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 99887753 235899999999999999999999 6799999999999999999999999999976532211 1
Q ss_pred ccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc----ccccHH-------
Q 006903 504 FLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV----EVFDEV------- 571 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~----~~~d~~------- 571 (626)
...++..|++||.... ..++.++|||||||++|||++|++||........+........... ...+..
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 2345677899997653 3467899999999999999999988865433222211110000000 000000
Q ss_pred ---H----HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 572 ---L----IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 572 ---~----~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. ......+.....+.+++.+||+.+|++||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0 000001122456889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=288.99 Aligned_cols=241 Identities=20% Similarity=0.328 Sum_probs=194.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||++.. .+|+.||+|++.... ...+++.+|++++++++||||+++++++...+..++||||++++
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGG 84 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCC
Confidence 47899999999999984 568999999986532 23357899999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---S 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~ 503 (626)
+|.+++... ....+++..++.++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++....... .
T Consensus 85 ~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 85 DLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVH----DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred cHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 999998642 2346789999999999999999999 6799999999999999999999999999986543221 1
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...++..|++||.......+.++|||||||++|||+||+.|+..+. ..+.+.......... .......
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~ 227 (256)
T cd08218 160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-MKNLVLKIIRGSYPP-----------VSSHYSY 227 (256)
T ss_pred hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-HHHHHHHHhcCCCCC-----------CcccCCH
Confidence 2335667899999877778899999999999999999999987542 233333332221110 1112234
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+++.+||+.+|++||++.||++
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 228 DLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhh
Confidence 5888999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=293.52 Aligned_cols=250 Identities=16% Similarity=0.200 Sum_probs=191.7
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|... +++.||+|+++... ...+.+.+|++++++++|+||+++++++...+..++||||++++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~ 85 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERT 85 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCC
Confidence 467999999999999854 68899999987543 23467899999999999999999999999999999999999987
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---- 502 (626)
.+..+.. ....+++..+..++.+++.||.||| .++|+||||||+||++++++.+||+|||++.......
T Consensus 86 ~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 86 LLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCH----SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred HHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 7776664 2345899999999999999999999 6799999999999999999999999999976543321
Q ss_pred cccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc---------------c----
Q 006903 503 SFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE---------------E---- 562 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~---------------~---- 562 (626)
....++..|++||..... .++.++||||||+++|||++|+.||........ ....... .
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ-LYLIQKCLGPLPPSHQELFSSNPRFAG 237 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHhhhcccCccccc
Confidence 223456779999988776 778999999999999999999998864332211 1111000 0
Q ss_pred -cccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 563 -WTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 563 -~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+...............+.+++.+||+.+|++||+++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 238 VAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000001111111111223566899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=291.85 Aligned_cols=252 Identities=17% Similarity=0.184 Sum_probs=188.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|+. .+++.||||+++.... ..+.+.+|++++++++||||+++++++...+..++||||+. +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~ 83 (284)
T cd07860 5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 83 (284)
T ss_pred eeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-c
Confidence 36799999999999985 4689999999875432 23578899999999999999999999999999999999996 6
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---S 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~ 503 (626)
+|..++... ....+++..+..++.+++.||+||| +++++||||||+||++++++.+|++|||++....... .
T Consensus 84 ~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh----~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (284)
T cd07860 84 DLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCH----SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 158 (284)
T ss_pred CHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccc
Confidence 899988643 2356899999999999999999999 6799999999999999999999999999976432211 1
Q ss_pred ccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHH----------
Q 006903 504 FLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL---------- 572 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~---------- 572 (626)
...++..|++||..... .++.++|||||||++|||+||+.||..........+.............+..
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07860 159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF 238 (284)
T ss_pred cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence 12345678999976543 3578999999999999999999998754333222211111000000000000
Q ss_pred H------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 I------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. .....+.....+.+++.+||+.||++|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 239 PKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred ccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0 00000112235678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=286.29 Aligned_cols=241 Identities=22% Similarity=0.266 Sum_probs=196.3
Q ss_pred cccccCCCcceEEEEeCC-CcEEEEEEcCCCCCC-H---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVLDD-GLMLAVKRLRDWSIS-S---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~-~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
..||.|.-|+||.+++++ +..+|+|++.+.... . .....|-++|+.++||.+..|++.+.++...|++||||+||
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGG 162 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGG 162 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCc
Confidence 679999999999999654 689999999876532 2 35678899999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC-------
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN------- 499 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~------- 499 (626)
+|..+++. +.+..|+...+..++.+|+.||+||| -.|||.|||||+||||.++|++.++||-|+....
T Consensus 163 dL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLH----mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~ 237 (459)
T KOG0610|consen 163 DLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLH----MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVK 237 (459)
T ss_pred cHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHH----hhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeec
Confidence 99998875 45678999999999999999999999 6899999999999999999999999998742100
Q ss_pred ---------------------------CCc-------------------------cccccccccchhhccccCCCCCcch
Q 006903 500 ---------------------------HDQ-------------------------SFLAQTSSLKINDISNQMCSTIKAD 527 (626)
Q Consensus 500 ---------------------------~~~-------------------------~~~~~~~~~~~pe~~~~~~~~~k~D 527 (626)
... ....||..|.|||++.+...+.++|
T Consensus 238 s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVD 317 (459)
T KOG0610|consen 238 SSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVD 317 (459)
T ss_pred cCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhh
Confidence 000 0124677899999999999999999
Q ss_pred hHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCC----H
Q 006903 528 VYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPS----M 603 (626)
Q Consensus 528 VwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs----~ 603 (626)
+|+|||++|||+.|+.||.+..+-......+.++....+ .++.+..+.+||.+.|.+||++|-. +
T Consensus 318 WWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~-----------~~~vs~~akDLIr~LLvKdP~kRlg~~rGA 386 (459)
T KOG0610|consen 318 WWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPE-----------EPEVSSAAKDLIRKLLVKDPSKRLGSKRGA 386 (459)
T ss_pred HHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCC-----------CCcchhHHHHHHHHHhccChhhhhccccch
Confidence 999999999999999999866555444433333322211 1133456889999999999999998 6
Q ss_pred HHHHH
Q 006903 604 NQVAV 608 (626)
Q Consensus 604 ~ev~~ 608 (626)
+||.+
T Consensus 387 ~eIK~ 391 (459)
T KOG0610|consen 387 AEIKR 391 (459)
T ss_pred HHhhc
Confidence 66644
|
|
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=293.78 Aligned_cols=242 Identities=17% Similarity=0.304 Sum_probs=188.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEe------CCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCS------KQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~------~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .+++.+|+|.+........++..|+.++.++ +||||+++++++.. .+..+++|||
T Consensus 21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~ 100 (282)
T cd06636 21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEF 100 (282)
T ss_pred heeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEe
Confidence 36899999999999995 5689999999876544556788999999988 69999999998853 4578999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC--
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-- 500 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-- 500 (626)
+++|+|.+++.... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++.....
T Consensus 101 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH----~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~ 175 (282)
T cd06636 101 CGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLH----AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 175 (282)
T ss_pred CCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccc
Confidence 99999999996422 345788889999999999999999 67999999999999999999999999999764321
Q ss_pred -Cccccccccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 501 -DQSFLAQTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 501 -~~~~~~~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
......++..|++||... ...++.++|||||||++|||+||+.||.......... ...... ...
T Consensus 176 ~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-~~~~~~-~~~-------- 245 (282)
T cd06636 176 GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-LIPRNP-PPK-------- 245 (282)
T ss_pred cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh-hHhhCC-CCC--------
Confidence 122344677899999764 3456789999999999999999999986443222111 111110 000
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.........+.+++.+||+.||.+|||+.|+++
T Consensus 246 -~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 246 -LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred -CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 011123346889999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=289.32 Aligned_cols=242 Identities=21% Similarity=0.296 Sum_probs=194.3
Q ss_pred cccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.||+|+||.||++... +++.+|+|.+..... ..+++.+|++.+++++||||+++++++...+..++++||+++++|
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 86 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSL 86 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcH
Confidence 67999999999999864 689999999876542 335788999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccC-CCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-ccccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRE-DGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-QSFLA 506 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~-~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-~~~~~ 506 (626)
.+++.... ..++......++.+++.||+|+| + .+++||||||+||++++++.++|+|||.+...... .....
T Consensus 87 ~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH----~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 160 (265)
T cd06605 87 DKILKEVQ--GRIPERILGKIAVAVLKGLTYLH----EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFV 160 (265)
T ss_pred HHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHc----CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhccc
Confidence 99996432 57889999999999999999999 5 79999999999999999999999999987543211 11145
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc----chhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF----NLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
++..|++||......++.++||||||+++|||++|+.|+.... ...+............ . ......
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~ 230 (265)
T cd06605 161 GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPR-L---------PSGKFS 230 (265)
T ss_pred CChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCC-C---------ChhhcC
Confidence 6677999999877788999999999999999999999986442 2222232222211100 0 001133
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+.+++.+||..+|++|||+.|++..
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 231 PDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 458889999999999999999999753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=289.39 Aligned_cols=248 Identities=22% Similarity=0.337 Sum_probs=193.1
Q ss_pred ccccccCCCcceEEEEeCC--CcEEEEEEcCCCC-----------CCHHHHHHHHHHhcc-CCCCCccccceEEEeCCeE
Q 006903 351 AELLGRGKHGSLYRVVLDD--GLMLAVKRLRDWS-----------ISSEDFKNRMQKIDH-VKHPNVLPPLAYYCSKQEK 416 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~--g~~vAvK~l~~~~-----------~~~~~~~~ei~~l~~-l~H~nIv~l~g~~~~~~~~ 416 (626)
.+.||+|+||.||+|.... ++.+|+|.+.... ....++.+|+.++.+ ++||||+++++++...+..
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 84 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRL 84 (269)
T ss_pred hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeE
Confidence 3679999999999999654 7889999875322 112356778887764 7999999999999999999
Q ss_pred EEEEeecCCCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 417 LLVYEYQPNGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 417 ~lv~Ey~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
+++|||+++++|.+++... .....+++..++.++.|++.||.|||+ ..+|+||||||+||+++.++.+||+|||++
T Consensus 85 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 161 (269)
T cd08528 85 YIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK---EKRIVHRDLTPNNIMLGEDDKVTITDFGLA 161 (269)
T ss_pred EEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc---CCceeecCCCHHHEEECCCCcEEEecccce
Confidence 9999999999999988532 234568999999999999999999993 358999999999999999999999999998
Q ss_pred cccCCCc--cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHH
Q 006903 496 VTENHDQ--SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 496 ~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
....... ....++..|++||......++.++||||||+++|||++|+.||... +............... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~-~------ 233 (269)
T cd08528 162 KQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST-NMLSLATKIVEAVYEP-L------ 233 (269)
T ss_pred eecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc-CHHHHHHHHhhccCCc-C------
Confidence 6543321 2334567789999887777889999999999999999999998643 2222222222221110 0
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
........+.+++.+||+.||++||++.|+..++++
T Consensus 234 ---~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 234 ---PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred ---CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 001123458889999999999999999999998863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=305.36 Aligned_cols=241 Identities=20% Similarity=0.304 Sum_probs=194.0
Q ss_pred cccccCCCcceEEEEeC-CCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.-||.|+||.||+|..+ ++-..|.|.+.... ..-++|.-||++|...+||+||++++.|..++.+|+..|||.||-..
T Consensus 38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVD 117 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVD 117 (1187)
T ss_pred hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHh
Confidence 45889999999999854 46667778876544 34578999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~~~~~ 506 (626)
.++-. -+..|...++..++.+++.||.||| +++|||||||+.|||+.-+|.++++|||.+.... .....+.
T Consensus 118 aimlE--L~r~LtE~QIqvvc~q~ldALn~LH----s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFI 191 (1187)
T KOG0579|consen 118 AIMLE--LGRVLTEDQIQVVCYQVLDALNWLH----SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFI 191 (1187)
T ss_pred HHHHH--hccccchHHHHHHHHHHHHHHHHHh----hcchhhhhccccceEEEecCcEeeecccccccchhHHhhhcccc
Confidence 88763 3568999999999999999999999 7899999999999999999999999999864322 2234567
Q ss_pred cccccchhhc-----cccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 507 QTSSLKINDI-----SNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 507 ~~~~~~~pe~-----~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
|+++||+||+ ....+|++++|||||||+|.||..+.+|...- +....+..+...+.. .. ..+..+
T Consensus 192 GTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel-npMRVllKiaKSePP-TL--------lqPS~W 261 (1187)
T KOG0579|consen 192 GTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSEPP-TL--------LQPSHW 261 (1187)
T ss_pred CCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc-chHHHHHHHhhcCCC-cc--------cCcchh
Confidence 8999999986 34567899999999999999999999886533 222222222222211 11 123345
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+|+..||+.||++.++++
T Consensus 262 s~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 262 SRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred hhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 566889999999999999999999865
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=294.34 Aligned_cols=240 Identities=18% Similarity=0.246 Sum_probs=188.9
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-C---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-S---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||+|+||.||+|.. .+++.||+|.+..... . .+++.+|+++++.++||||+++.+++...+..++||||++ |
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g 99 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-G 99 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-C
Confidence 6799999999999985 4689999999864332 2 2468899999999999999999999999999999999997 5
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLA 506 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~ 506 (626)
++.+++... ...+++..+..++.|++.||.||| +.+|+||||+|+||++++++.+||+|||++....... ...
T Consensus 100 ~l~~~~~~~--~~~l~~~~~~~~~~ql~~~L~~LH----~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~-~~~ 172 (307)
T cd06607 100 SASDILEVH--KKPLQEVEIAAICHGALQGLAYLH----SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN-SFV 172 (307)
T ss_pred CHHHHHHHc--ccCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcccEEECCCCCEEEeecCcceecCCCC-Ccc
Confidence 777777532 346899999999999999999999 6799999999999999999999999999986543332 234
Q ss_pred cccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 507 QTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 507 ~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
++..|++||... ...++.++||||||+++|||+||+.|+........ ......... .. ........
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-~~~~~~~~~-~~---------~~~~~~~~ 241 (307)
T cd06607 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNDS-PT---------LSSNDWSD 241 (307)
T ss_pred CCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-HHHHhcCCC-CC---------CCchhhCH
Confidence 566789999763 34568899999999999999999999865432221 111111110 00 01122345
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
.+.+++.+||+.+|++||++.+++...
T Consensus 242 ~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 242 YFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 688999999999999999999998743
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=308.44 Aligned_cols=240 Identities=19% Similarity=0.284 Sum_probs=198.3
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC--C---CHHHHHHHHHHhccCCCCCccccceEEEeCCe--EEEEEeec
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--I---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE--KLLVYEYQ 423 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~--~~lv~Ey~ 423 (626)
++||+|+|-+||||.. .+|..||.-.++..+ . ..+.|..|+.+|+.|+|||||+++.++.+... ..+|+|.|
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 6799999999999984 468888865444222 2 23679999999999999999999999987655 67899999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCccccCCCc
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~~~~~ 502 (626)
..|+|+.|++. .+.++.....++++||++||.|||+. .++|||||||.+||+++. .|.+||+|.|||.......
T Consensus 126 TSGtLr~Y~kk---~~~vn~kaik~W~RQILkGL~yLHs~--~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ 200 (632)
T KOG0584|consen 126 TSGTLREYRKK---HRRVNIKAIKSWCRQILKGLVYLHSQ--DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH 200 (632)
T ss_pred cCCcHHHHHHH---hccCCHHHHHHHHHHHHHHhhhhhcC--CCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence 99999999963 45678889999999999999999975 789999999999999985 5899999999987643322
Q ss_pred -cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 -SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
..+.||+.|||||+.. ..|++.+||||||+.++||+|+..|+..+.+.++.++.+..+..... +. ...
T Consensus 201 aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s-l~-----kV~---- 269 (632)
T KOG0584|consen 201 AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA-LS-----KVK---- 269 (632)
T ss_pred cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH-hh-----ccC----
Confidence 2368999999999987 67899999999999999999999999999999998888776543211 11 111
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
-+++.++|.+|+.. .++|||+.|+++
T Consensus 270 dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 270 DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 12478889999999 999999999976
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=287.09 Aligned_cols=242 Identities=23% Similarity=0.339 Sum_probs=191.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+++.||+|.++.... ..+.+.+|++++++++|+||+++++++...+..++|+||++++
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGG 84 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCC
Confidence 47899999999999985 4689999999876554 3467899999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc---
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS--- 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~--- 503 (626)
+|.+++.. ...+++..+..++.+++.||.||| +.+|+|+||||+||++++++.+||+|||++........
T Consensus 85 ~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh----~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 85 TLEELLEH---GRILDEHVIRVYTLQLLEGLAYLH----SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred cHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 99999963 345789999999999999999999 67999999999999999999999999999765322211
Q ss_pred ----ccccccccchhhccccCC---CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 504 ----FLAQTSSLKINDISNQMC---STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 504 ----~~~~~~~~~~pe~~~~~~---~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
...++..|++||...... .+.++||||||+++||+++|+.||....+............ .... ..
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~-----~~-- 229 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGH-KPPI-----PD-- 229 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCC-CCCC-----Cc--
Confidence 234566789999876555 78899999999999999999999975433222222211110 0000 00
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+||+.+|++||++.|++.
T Consensus 230 -~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 230 -SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0111345778999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=301.73 Aligned_cols=245 Identities=17% Similarity=0.210 Sum_probs=188.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+++.. +++.+|+|.+.+.. ...+.+.+|+.++..++|+||+++++++.+.+..++||||+++
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~ 85 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVG 85 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCC
Confidence 378999999999999954 57899999986432 1234578899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---- 501 (626)
|+|.++++. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 86 g~L~~~l~~--~~~~l~~~~~~~~~~qi~~al~~lH----~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 86 GDLLTLLSK--FEDRLPEDMARFYLAEMVIAIDSVH----QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred CcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 999999963 2346899999999999999999999 689999999999999999999999999998643221
Q ss_pred ccccccccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 502 QSFLAQTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
.....++..|++||... ...++.++|||||||++|||++|+.||... +..+....+......... . .
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~~~-p------~ 231 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHKERFQF-P------A 231 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC-CHHHHHHHHhCCCccccC-C------C
Confidence 12345788999999875 345688999999999999999999999754 333333333322111110 0 0
Q ss_pred ccHHHHHHHHHHHhhccCCCCC--CCCCHHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPN--ERPSMNQVAVM 609 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~--~RPs~~ev~~~ 609 (626)
........+.+++.+|+..++. .||+++|+++.
T Consensus 232 ~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 232 QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0111233466777787755444 47899998775
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=286.67 Aligned_cols=241 Identities=22% Similarity=0.338 Sum_probs=192.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||++.. .+++.+|+|.+..... ..+.+.+|++++++++||||+++++.+...+..++||||++++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGG 84 (256)
T ss_pred EEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCC
Confidence 47899999999999984 5689999999875432 2357889999999999999999999999899999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC-CCeEEeeccCccccCCC--cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN-MEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGl~~~~~~~--~~ 503 (626)
+|.+++... ....+++..+..++.+++.||.||| +++|+||||||+||+++++ +.+|++|||++...... ..
T Consensus 85 ~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh----~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 85 TLAEYIQKR-CNSLLDEDTILHFFVQILLALHHVH----TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred CHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 999999642 2346899999999999999999999 6799999999999999855 45799999998654322 12
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...++..|++||.......+.++||||||+++|||++|+.||... +.............. . .......
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~~-~----------~~~~~~~ 227 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA-NLPALVLKIMSGTFA-P----------ISDRYSP 227 (256)
T ss_pred ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccC-chHHHHHHHHhcCCC-C----------CCCCcCH
Confidence 234667899999988777889999999999999999999998643 323333322221110 0 1111234
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+++.+||+.+|++|||+.|+++
T Consensus 228 ~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 228 DLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhh
Confidence 5788999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=292.02 Aligned_cols=251 Identities=21% Similarity=0.277 Sum_probs=188.3
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||||.+..... ....+.+|++++++++||||+++++++...+..++||||+++ +
T Consensus 10 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~ 88 (291)
T cd07844 10 LDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-D 88 (291)
T ss_pred EEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-C
Confidence 368999999999999954 689999999875432 234577899999999999999999999999999999999985 9
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~ 504 (626)
|.+++... ...+++.....++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 89 L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (291)
T cd07844 89 LKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCH----QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSN 162 (291)
T ss_pred HHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH----hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccc
Confidence 99988642 246889999999999999999999 679999999999999999999999999997643211 111
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc--cccc--------------
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW--TVEV-------------- 567 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~-------------- 567 (626)
..++..|++||.... ..++.++|||||||++|||++|+.||.......+.+........ ..+.
T Consensus 163 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (291)
T cd07844 163 EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS 242 (291)
T ss_pred cccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccc
Confidence 234567899997654 45788999999999999999999998654432222222111000 0000
Q ss_pred ---c-cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 568 ---F-DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 568 ---~-d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. ...+............+.+++.+|++.+|++|||+.|++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0 0000000000011245778999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=295.90 Aligned_cols=262 Identities=17% Similarity=0.264 Sum_probs=194.2
Q ss_pred cccccC--CCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRG--KHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G--~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
..||+| +||+||++.. .+|+.||+|.+...... .+.+.+|+.+++.++||||+++++++..++..++||||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356776 8999999985 57999999998754432 25678999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---C-
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---D- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~- 501 (626)
|+|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+..... .
T Consensus 84 ~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH----~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 84 GSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLH----QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 99999986432 245889999999999999999999 67999999999999999999999999985422110 0
Q ss_pred ------ccccccccccchhhccccC--CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc--------
Q 006903 502 ------QSFLAQTSSLKINDISNQM--CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV-------- 565 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~--~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 565 (626)
.....++..|++||..... .++.++|||||||++|||++|+.||....................
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 1112234568999987553 467899999999999999999999875433222222111100000
Q ss_pred ---------------------------ccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhhc
Q 006903 566 ---------------------------EVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIKEE 616 (626)
Q Consensus 566 ---------------------------~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~~~ 616 (626)
...+... ...........+.+++.+||+.||++|||+.|+++ .++.++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERL-RTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccc-cchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 0000000 00112234567899999999999999999999975 56666655
Q ss_pred ccc
Q 006903 617 EER 619 (626)
Q Consensus 617 ~~~ 619 (626)
...
T Consensus 318 ~~~ 320 (328)
T cd08226 318 TQG 320 (328)
T ss_pred ccc
Confidence 444
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=287.23 Aligned_cols=239 Identities=17% Similarity=0.199 Sum_probs=186.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---C---HHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---S---SEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .++..||||.+..... . .+.+.+|++++++++||||+++++++.+. ...+++||
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFME 86 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEE
Confidence 47899999999999985 5689999998853321 1 24678899999999999999999987763 46789999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH- 500 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~- 500 (626)
|+++++|.+++.. ...+++...++++.+++.||.||| +.+|+|+||||+||+++.++.++|+|||++.....
T Consensus 87 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 87 HMPGGSIKDQLKS---YGALTENVTRKYTRQILEGVSYLH----SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred ecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 9999999999863 235788889999999999999999 67999999999999999999999999998764221
Q ss_pred -----CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 501 -----DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 501 -----~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
......++..|++||.......+.++|||||||++|||++|+.||......... ......... .
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~~~~----------~ 228 (265)
T cd06652 160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAI-FKIATQPTN----------P 228 (265)
T ss_pred cccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHH-HHHhcCCCC----------C
Confidence 112234667899999887777889999999999999999999998644322222 111111110 0
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+......+.+++.+|+. +|++||+++|+++
T Consensus 229 ~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 229 VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 1122233457778888985 8999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=302.05 Aligned_cols=245 Identities=17% Similarity=0.201 Sum_probs=188.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+++. .+++.||+|.+.... ...+.+.+|+.++..++|+||+++++++..++..|+||||+++
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~g 85 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVG 85 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence 47899999999999985 468899999986532 1234578899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++... ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||++.......
T Consensus 86 g~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH----~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 86 GDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIH----QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred CcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 9999999642 346889999999999999999999 6899999999999999999999999999986543222
Q ss_pred -cccccccccchhhcccc-----CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 -SFLAQTSSLKINDISNQ-----MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~-----~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
....++..|++||.... ..++.++|||||||++|||++|+.||.... ..+....+......... ..
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~~~-p~------ 231 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHEERFQF-PS------ 231 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC-HHHHHHHHHcCCCcccC-CC------
Confidence 22457888999998754 346789999999999999999999997433 23333333222111110 00
Q ss_pred ccHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNE--RPSMNQVAVM 609 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~ev~~~ 609 (626)
........+.+++.+|+..++++ |++++++++.
T Consensus 232 ~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 232 HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00112345777888888865544 4688888754
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=291.58 Aligned_cols=238 Identities=19% Similarity=0.220 Sum_probs=193.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 85 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPG 85 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCC
Confidence 47899999999999985 468999999986533 2235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||+|+||+++.++.+||+|||++..........
T Consensus 86 ~~L~~~~~~---~~~l~~~~~~~~~~qil~~l~~lH----~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 158 (290)
T cd05580 86 GELFSHLRK---SGRFPEPVARFYAAQVVLALEYLH----SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL 158 (290)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence 999999963 256899999999999999999999 6799999999999999999999999999987655444445
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||.......+.++||||||+++|||++|+.||..... ............. .+......+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~------------~~~~~~~~l 225 (290)
T cd05580 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-IQIYEKILEGKVR------------FPSFFSPDA 225 (290)
T ss_pred CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCCcc------------CCccCCHHH
Confidence 677889999988777778999999999999999999999875432 2222222211110 011113357
Q ss_pred HHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 586 LQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
.+++.+||+.||++|| +++|+++
T Consensus 226 ~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 226 KDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred HHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 7889999999999999 6666653
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=291.21 Aligned_cols=243 Identities=20% Similarity=0.285 Sum_probs=186.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHH-hccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQK-IDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~-l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||++.. .+|+.||+|+++.... ...++..|+.. ++..+||||+++++++..++..+++|||++ |
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (283)
T cd06617 6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-T 84 (283)
T ss_pred EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-c
Confidence 36799999999999985 4699999999876432 23456666665 667789999999999999999999999997 6
Q ss_pred ChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCC-CceeccCCCCCeeeCCCCCeEEeeccCccccCCC--c
Q 006903 427 SLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELRED-GIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--Q 502 (626)
Q Consensus 427 ~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~ 502 (626)
+|.+++... .....+++..++.++.|++.||+||| ++ +++||||||+||+++.++.+||+|||++...... .
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (283)
T cd06617 85 SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH----SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK 160 (283)
T ss_pred cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh----hcCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 888887532 23357899999999999999999999 44 8999999999999999999999999998653221 1
Q ss_pred cccccccccchhhcccc----CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 SFLAQTSSLKINDISNQ----MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~----~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....++..|++||.... ..++.++|+|||||++|||++|+.||.......+.......... ... . .
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~-----~----~ 230 (283)
T cd06617 161 TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPS-PQL-----P----A 230 (283)
T ss_pred ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCC-CCC-----C----c
Confidence 22345677899997643 34578999999999999999999998643332222222221110 000 0 0
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++.+||+.+|++||++.++++
T Consensus 231 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 231 EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112345888999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=294.14 Aligned_cols=241 Identities=22% Similarity=0.304 Sum_probs=191.7
Q ss_pred cccccCCCcceEEEEeC-CCcEEEEEEcCCCCCC----HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSIS----SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||+|+||.||+|... +++.||+|.+...... .+.+..|+++++.++||||+++++.+...+..++||||+.++
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 86 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGG 86 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCC
Confidence 67999999999999854 5899999999765432 346889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---- 502 (626)
+|.+++... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 87 ~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (316)
T cd05574 87 ELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLH----LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS 161 (316)
T ss_pred CHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHH----HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccc
Confidence 999998642 3457899999999999999999999 6799999999999999999999999999875422111
Q ss_pred ----------------------------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH
Q 006903 503 ----------------------------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW 554 (626)
Q Consensus 503 ----------------------------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~ 554 (626)
....++..|++||......++.++||||||+++|||++|+.||........+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~ 241 (316)
T cd05574 162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETF 241 (316)
T ss_pred cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHH
Confidence 0123566799999988888899999999999999999999998744332222
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCC----HHHHHH
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPS----MNQVAV 608 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs----~~ev~~ 608 (626)
........... ........+.+++.+||+.||++||+ ++|++.
T Consensus 242 -~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 242 -SNILKKEVTFP----------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred -HHHhcCCccCC----------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 22221111000 00113446889999999999999999 666655
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=289.74 Aligned_cols=248 Identities=18% Similarity=0.253 Sum_probs=191.7
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~Ey~~~g 426 (626)
+.||.|++|.||++.. .+++.+|+|.+..... ...++.+|++++++++||||++++++|... +..++||||++++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 86 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGG 86 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCC
Confidence 6899999999999996 4689999999875432 345789999999999999999999988654 4689999999999
Q ss_pred ChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-Cccc
Q 006903 427 SLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-DQSF 504 (626)
Q Consensus 427 ~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~~~~ 504 (626)
+|.+++... .....+++.....++.+++.||.||| ..+++|+||+|+||++++++.++|+|||++..... ....
T Consensus 87 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH----~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 162 (287)
T cd06621 87 SLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH----SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGT 162 (287)
T ss_pred CHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEecCCeEEEeecccccccccccccc
Confidence 999887532 22346888999999999999999999 67999999999999999999999999999754322 1123
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc----chhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF----NLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
..++..|++||......++.++|||||||++|||+||+.|+.... ...+......... ... .... ......
T Consensus 163 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~---~~~~~~ 237 (287)
T cd06621 163 FTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP-NPE-LKDE---PGNGIK 237 (287)
T ss_pred ccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC-chh-hccC---CCCCCc
Confidence 345677899998887788999999999999999999999987541 1222222211111 000 0000 000012
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....+.+++.+||+.+|++|||+.|+++
T Consensus 238 ~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 238 WSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred hHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 2456889999999999999999999988
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=290.46 Aligned_cols=250 Identities=19% Similarity=0.193 Sum_probs=186.1
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|+++++.++|+||+++.+++..++..++||||+. +++
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l 89 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDL 89 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCH
Confidence 6799999999999984 568999999986543 223467899999999999999999999999999999999996 677
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++... ...+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 90 ~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 163 (291)
T cd07870 90 AQYMIQH--PGGLHPYNVRLFMFQLLRGLAYIH----GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSE 163 (291)
T ss_pred HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCc
Confidence 7776432 245788889999999999999999 679999999999999999999999999998643221 1222
Q ss_pred ccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc----------------ccccccc
Q 006903 506 AQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE----------------EWTVEVF 568 (626)
Q Consensus 506 ~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~----------------~~~~~~~ 568 (626)
.++..|++||.... ..++.++|||||||++|||+||+.||.......+........ .+..+..
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (291)
T cd07870 164 VVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWF 243 (291)
T ss_pred cccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhc
Confidence 34677999998654 346789999999999999999999987544332222221110 0000000
Q ss_pred ----cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 569 ----DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 569 ----d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
................+.+++.+|++.||++|||+.|++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 244 LPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000000011345778999999999999999999864
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=292.58 Aligned_cols=247 Identities=18% Similarity=0.229 Sum_probs=187.8
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
+.||+|+||.||++.. .+++.||+|.+..... ....+.+|+.++.++. ||||+++++++..++..+++|||+.. +
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~ 88 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-S 88 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-C
Confidence 6899999999999984 5689999999875432 3356889999999996 99999999999999999999999864 5
Q ss_pred hhHhhcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--cc
Q 006903 428 LFNLLHG--SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 428 L~~~l~~--~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~ 503 (626)
+.++... ......+++.....++.+++.||+|||+ ..+|+||||||+||+++.++.+||+|||++...... ..
T Consensus 89 l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 165 (288)
T cd06616 89 LDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE---ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKT 165 (288)
T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccc
Confidence 5443321 1123568999999999999999999994 358999999999999999999999999998643221 12
Q ss_pred ccccccccchhhccccC---CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 504 FLAQTSSLKINDISNQM---CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~---~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
...++..|++||..... .++.++|||||||++|||++|+.||.......+........... .+.. .....
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~ 238 (288)
T cd06616 166 RDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPP------ILSN-SEERE 238 (288)
T ss_pred cccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCC------cCCC-cCCCc
Confidence 23456779999987654 57889999999999999999999987543322222222211110 0000 01112
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
....+.+++.+||+.+|++|||+++|++.
T Consensus 239 ~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 239 FSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 34468899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=289.25 Aligned_cols=251 Identities=19% Similarity=0.248 Sum_probs=191.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+|+.||+|++..... ..+.+.+|+.++++++||||+++++++...+..++||||+ ++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~ 83 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PS 83 (286)
T ss_pred EeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CC
Confidence 46799999999999995 4689999999875442 2467899999999999999999999999999999999999 99
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD----Q 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~----~ 502 (626)
+|.+++... ...+++..+..++.|++.||+||| +.+|+|+||||+||+++.++.++++|||++...... .
T Consensus 84 ~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 84 DLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMH----ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence 999998643 256899999999999999999999 679999999999999999999999999997654332 1
Q ss_pred cccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-cccc--------cccc---
Q 006903 503 SFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-EWTV--------EVFD--- 569 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-~~~~--------~~~d--- 569 (626)
....++..|++||.... ..++.++||||+||++|||+||+++|....+...+. ..... .... +..+
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA-IVFRTLGTPNEETWPGLTSLPDYNK 236 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHH-HHHHHcCCCChHHHhhccCcchhhc
Confidence 22346778999998654 345889999999999999999987776443322221 11110 0000 0000
Q ss_pred ------HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 570 ------EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 570 ------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.........++....+.+++.+|++.+|++||++++++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 237 ITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred ccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000111223568899999999999999999999753
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=284.42 Aligned_cols=241 Identities=20% Similarity=0.292 Sum_probs=197.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++.+.+++|+||+++++++...+..++||||+++++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGS 85 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCc
Confidence 378999999999999965 599999999876543 35679999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccC-CCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc---
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRE-DGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS--- 503 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~-~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~--- 503 (626)
|.+++.. ...+++..+..++.|+++|++||| + .+++||||+|+||+++.++.++++|||++........
T Consensus 86 L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lh----~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 158 (264)
T cd06623 86 LADLLKK---VGKIPEPVLAYIARQILKGLDYLH----TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN 158 (264)
T ss_pred HHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHh----ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence 9999963 256899999999999999999999 6 8999999999999999999999999999765432221
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc--chhHHHHHHhhcccccccccHHHHhhhccHH-
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF--NLATWVHSVVREEWTVEVFDEVLIAEAASEE- 580 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~- 580 (626)
...++..|.+||......++.++||||||+++|||+||+.|+.... ...+........... .....
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 227 (264)
T cd06623 159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPP-----------SLPAEE 227 (264)
T ss_pred ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCC-----------CCCccc
Confidence 2345677899999888788999999999999999999999987543 222222222211110 01111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
....+.+++.+||+.+|++||++.|+++.
T Consensus 228 ~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 228 FSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 34468889999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=287.46 Aligned_cols=239 Identities=18% Similarity=0.295 Sum_probs=191.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .+++.||+|.+..... ..+.+.+|++.+++++||||+++++++..++..++||||+++++
T Consensus 9 ~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 88 (277)
T cd06641 9 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 88 (277)
T ss_pred heeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCc
Confidence 36799999999999984 5689999998764432 23568899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~ 504 (626)
|.+++.. ..+++.....++.+++.|+.||| +.+++|+||||+||+++.++.++++|||++...... ...
T Consensus 89 l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06641 89 ALDLLEP----GPLDETQIATILREILKGLDYLH----SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHc----cCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhcc
Confidence 9999853 35889999999999999999999 689999999999999999999999999997643221 122
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||.......+.++|||||||++|||++|+.|+.... ............ .. .........
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~-~~----------~~~~~~~~~ 228 (277)
T cd06641 161 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH-PMKVLFLIPKNN-PP----------TLEGNYSKP 228 (277)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc-hHHHHHHHhcCC-CC----------CCCcccCHH
Confidence 345667899998877777889999999999999999999986432 222222221111 00 011122345
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+.+++.+||+.+|++||++.++++.
T Consensus 229 ~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 229 LKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHccCChhhCcCHHHHHhC
Confidence 7889999999999999999999884
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=289.07 Aligned_cols=239 Identities=18% Similarity=0.177 Sum_probs=182.3
Q ss_pred ccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHHHHH---hccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 353 LLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNRMQK---IDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~ei~~---l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
+||+|+||.||++.. .+++.+|+|.+...... ...+.+|..+ +...+||||+.+.+++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999985 56899999988654321 1233444433 344579999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-Ccc
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-DQS 503 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~~~ 503 (626)
+|+|.+++.. ...+++.....++.|++.||.||| +.+|+||||||+|||+++++.++++|||++..... ...
T Consensus 81 ~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH----~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 153 (279)
T cd05633 81 GGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 153 (279)
T ss_pred CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCcc
Confidence 9999999863 346899999999999999999999 67999999999999999999999999999864322 222
Q ss_pred ccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc-hhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 504 FLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFN-LATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
...++..|++||... ...++.++|||||||++|||+||+.||..... ........... ... ..++..
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~----------~~~~~~ 222 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-VNV----------ELPDSF 222 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc-CCc----------CCcccc
Confidence 335678899999875 35578899999999999999999999863221 11111111100 000 011223
Q ss_pred HHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERP-----SMNQVAVM 609 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~~ 609 (626)
...+.+++.+||+.||++|| +++|+++.
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 34578889999999999999 59888774
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=284.31 Aligned_cols=242 Identities=22% Similarity=0.298 Sum_probs=192.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||++.. .+|..+|+|.+.... ...+.+.+|++++++++|+||+++++.+...+..++|+||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGG 84 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCC
Confidence 46899999999999995 468899999986542 23457889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCccccCCCc---
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~~~~~--- 502 (626)
+|.+++... ....+++..+..++.+++.||.||| +.+|+|+||||+||++++++ .+|++|||.+.......
T Consensus 85 ~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 85 DLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIH----DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred cHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 999999642 2346899999999999999999999 67999999999999999875 46999999876543221
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||++|+.|+... +..++......... .. ..+...
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~-~~~~~~~~~~~~~~-~~----------~~~~~~ 227 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-NLHQLVLKICQGYF-AP----------ISPNFS 227 (257)
T ss_pred cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc-cHHHHHHHHhcccC-CC----------CCCCCC
Confidence 1234667799999887777889999999999999999999998643 33333333322211 11 011122
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+.+++.+||+.+|++|||+.|+++.
T Consensus 228 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 228 RDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 358888999999999999999999763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=292.62 Aligned_cols=245 Identities=18% Similarity=0.224 Sum_probs=192.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++.. .+++.||+|.+..... ..+.+.+|+++++.++||||+++++.+..++..++||||+++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g 85 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEG 85 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCC
Confidence 36899999999999985 4588999999876532 234678999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---- 501 (626)
++|.+++.. ...+++.....++.+++.||.||| +++|+||||||+||+++.++.+|++|||+++.....
T Consensus 86 ~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 86 GDCATLLKN---IGALPVDMARMYFAETVLALEYLH----NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 999999953 246899999999999999999999 679999999999999999999999999987531100
Q ss_pred --------------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccc
Q 006903 502 --------------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEV 567 (626)
Q Consensus 502 --------------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 567 (626)
.....++..|++||......++.++|||||||++|||++|+.||.+. ...++.............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~ 237 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD-TPEELFGQVISDDIEWPE 237 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcccCCCC
Confidence 00123456789999887777899999999999999999999998643 333333333222111000
Q ss_pred ccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 006903 568 FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINN 612 (626)
Q Consensus 568 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 612 (626)
........+.+++.+||+.+|++||++.++.+.|+.
T Consensus 238 ---------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 238 ---------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ---------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 001123457899999999999999997666666654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=288.05 Aligned_cols=239 Identities=18% Similarity=0.287 Sum_probs=192.3
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
+.||+|++|.||++.. .+++.+|+|++.... ...+.+.+|+.+++.++||||+++++++...+..++++||+++++|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~ 104 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALT 104 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHH
Confidence 6899999999999984 578999999986543 23456889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~~ 506 (626)
+++.. ..+++..+..++.+++.||+||| +++|+||||||+||+++.++.++++|||++...... .....
T Consensus 105 ~~~~~----~~~~~~~~~~~~~ql~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 176 (285)
T cd06648 105 DIVTH----TRMNEEQIATVCLAVLKALSFLH----AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV 176 (285)
T ss_pred HHHHh----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccccccc
Confidence 99863 35889999999999999999999 679999999999999999999999999987543221 12234
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
++..|++||......++.++|||||||++|||++|+.||..... ........... ..... ........+.
T Consensus 177 ~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-~~~~~~~~~~~-~~~~~--------~~~~~~~~l~ 246 (285)
T cd06648 177 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-LQAMKRIRDNL-PPKLK--------NLHKVSPRLR 246 (285)
T ss_pred CCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-HHHHHHHHhcC-CCCCc--------ccccCCHHHH
Confidence 67789999998777788999999999999999999999865332 22222222211 00000 0111234588
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 006903 587 QVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+++.+||+.+|++||++.++++
T Consensus 247 ~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 247 SFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHcccChhhCcCHHHHcc
Confidence 9999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=283.80 Aligned_cols=246 Identities=20% Similarity=0.286 Sum_probs=193.4
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEe--CCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCS--KQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~--~~~~~lv~Ey~~~ 425 (626)
+.||.|+||.||++. ..+++.||+|.+...... .+.+..|++++++++||||+++++++.. ....+++|||+++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~ 85 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEG 85 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccC
Confidence 679999999999998 457899999998754432 3467889999999999999999998764 3457899999999
Q ss_pred CChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhc-cCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 426 GSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEEL-REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 426 g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|.+++... .....+++..++.++.+++.||.|||..+ ++.+|+|+||||+||++++++.+|++|||++.......
T Consensus 86 ~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 165 (265)
T cd08217 86 GDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS 165 (265)
T ss_pred CCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcc
Confidence 9999999642 22457899999999999999999999321 14689999999999999999999999999987543322
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
....++..|++||......++.++||||||+++|+|++|+.|+.... ..+......... .. ..+..
T Consensus 166 ~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~-~~----------~~~~~ 233 (265)
T cd08217 166 FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-QLQLASKIKEGK-FR----------RIPYR 233 (265)
T ss_pred cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-HHHHHHHHhcCC-CC----------CCccc
Confidence 22346778999999887778899999999999999999999987432 222222222111 10 11223
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
....+.+++.+|++.+|++||++.+|+++
T Consensus 234 ~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 234 YSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 34568899999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=286.16 Aligned_cols=244 Identities=20% Similarity=0.331 Sum_probs=190.8
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCC------eEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQ------EKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~------~~~lv~Ey 422 (626)
.+.||+|+||.||+|... +++.+|+|.+.......+++.+|+.+++++ +|+||+++++++.... ..++||||
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 90 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMEL 90 (275)
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEc
Confidence 378999999999999964 678999999877655667899999999998 6999999999987644 48999999
Q ss_pred cCCCChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 423 QPNGSLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
+++++|.+++.... ....+++..+..++.|++.||.||| +.+|+|+||+|+||++++++.+|++|||++......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH----~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 166 (275)
T cd06608 91 CGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH----ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDST 166 (275)
T ss_pred CCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHHHEEEccCCeEEECCCccceecccc
Confidence 99999999986422 2357899999999999999999999 689999999999999999999999999987543221
Q ss_pred ---ccccccccccchhhcccc-----CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHH
Q 006903 502 ---QSFLAQTSSLKINDISNQ-----MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 ---~~~~~~~~~~~~pe~~~~-----~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
.....++..|++||.... ..++.++|||||||++|||+||+.||......... ....... .....
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~-~~~~~----- 239 (275)
T cd06608 167 LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRAL-FKIPRNP-PPTLK----- 239 (275)
T ss_pred hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHH-HHhhccC-CCCCC-----
Confidence 122346677999997542 23577899999999999999999998743322222 1111111 00000
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
........+.+++.+||..||++|||+.|+++
T Consensus 240 ---~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 240 ---SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ---chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11223446889999999999999999999975
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=284.96 Aligned_cols=241 Identities=21% Similarity=0.338 Sum_probs=190.7
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC-------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI-------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~-------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||++. ..+++.||+|.+..... ..+.+.+|++.+++++|+||+++++++...+..++||||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~ 84 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEW 84 (268)
T ss_pred cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEec
Confidence 4789999999999998 46789999999864331 135688999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCccccCCC
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTENHD 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~~~~ 501 (626)
+++++|.+++.. ...+++..+..++.|++.||.||| +.+++||||||+||+++.++ .+||+|||++......
T Consensus 85 ~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH----~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 85 MAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLH----ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred cCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 999999999963 346889999999999999999999 67999999999999998776 5899999997543321
Q ss_pred -------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc--hhHHHHHHhhcccccccccHHH
Q 006903 502 -------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN--LATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 502 -------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
.....++..|++||......++.++||||+|+++|||++|+.||..... ..............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------- 229 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTA-------- 229 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCC--------
Confidence 1123456679999988777788999999999999999999999863321 11111111111000
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...++.....+.+++.+|++.+|++||++.|+++
T Consensus 230 --~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 230 --PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 1122233456888999999999999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=290.81 Aligned_cols=244 Identities=18% Similarity=0.261 Sum_probs=191.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+++. .++..||+|.+..... ..+++.+|++++++++|||++++++++..++..++||||++
T Consensus 30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 108 (317)
T cd06635 30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL- 108 (317)
T ss_pred hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-
Confidence 36799999999999984 5689999999865432 12468889999999999999999999999999999999997
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|++.+++.. ....++|..+..++.+++.||.||| +++|+||||+|+||+++.++.+||+|||++...... ...
T Consensus 109 g~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH----~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-~~~ 181 (317)
T cd06635 109 GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLH----SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-NSF 181 (317)
T ss_pred CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcccEEECCCCCEEEecCCCccccCCc-ccc
Confidence 588887753 2346899999999999999999999 679999999999999999999999999987654322 223
Q ss_pred ccccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 506 AQTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 506 ~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
.++..|++||... ...++.++|||||||++|||++|+.||........ ........... .......
T Consensus 182 ~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~ 250 (317)
T cd06635 182 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNESPT----------LQSNEWS 250 (317)
T ss_pred cCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHhccCCC----------CCCcccc
Confidence 4567799999863 34568899999999999999999999865432222 22222211110 0111233
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
..+.+++.+||+.+|.+||++.++++.....
T Consensus 251 ~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 251 DYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 4578899999999999999999999865443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=284.27 Aligned_cols=238 Identities=19% Similarity=0.283 Sum_probs=190.7
Q ss_pred cccCCCcceEEEEeC-CCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 354 LGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 354 lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
||+|+||.||+++.. +++.+|+|.+..... ..+.+.+|+++++.++||||+++++++.+++..+++|||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999954 589999999875432 235788999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--ccccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QSFLA 506 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~~~~ 506 (626)
.+++.. ...+++..+..++.+++.||.|+| +++++|+||||+||+++.++.++++|||++...... .....
T Consensus 81 ~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH----~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~ 153 (262)
T cd05572 81 WTILRD---RGLFDEYTARFYIACVVLAFEYLH----NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFC 153 (262)
T ss_pred HHHHhh---cCCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccccccccc
Confidence 999964 245889999999999999999999 689999999999999999999999999998654332 22335
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc-hhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN-LATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++|+||||+++|||++|+.|+..... ..+............. .+......+
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 223 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE----------FPNYIDKAA 223 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCC----------CCcccCHHH
Confidence 67789999988777788999999999999999999999875431 2223332221111100 111123468
Q ss_pred HHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 586 LQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
.+++.+||+.+|++||+ ++|+++
T Consensus 224 ~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 224 KDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 89999999999999999 666654
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=286.87 Aligned_cols=241 Identities=20% Similarity=0.324 Sum_probs=194.3
Q ss_pred cccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 352 ELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
+.||+|+||.||+|... ++..||+|.+.......+.+.+|++.++.++|+||+++++++...+..++|+||+++++|.+
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 104 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTD 104 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHH
Confidence 67999999999999965 68899999997654456678999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFLAQ 507 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~~~ 507 (626)
++.... ..+++..+..++.+++.||.||| +.||+|+||||+||+++.++.++|+|||++...... .....+
T Consensus 105 ~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH----~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 178 (286)
T cd06614 105 IITQNF--VRMNEPQIAYVCREVLQGLEYLH----SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVG 178 (286)
T ss_pred HHHHhc--cCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccC
Confidence 997432 47999999999999999999999 689999999999999999999999999986543221 122335
Q ss_pred ccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHH
Q 006903 508 TSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQ 587 (626)
Q Consensus 508 ~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~ 587 (626)
+..|++||......++.++|||||||++|||++|+.|+........ ......... .... ........+.+
T Consensus 179 ~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~-~~~~~~~~~-~~~~--------~~~~~~~~l~~ 248 (286)
T cd06614 179 TPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA-LFLITTKGI-PPLK--------NPEKWSPEFKD 248 (286)
T ss_pred CcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcCC-CCCc--------chhhCCHHHHH
Confidence 6678999988777788999999999999999999999874433221 111111111 0000 01112345788
Q ss_pred HHhhccCCCCCCCCCHHHHHH
Q 006903 588 VALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 588 l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
++.+||+.+|.+||++.+++.
T Consensus 249 li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 249 FLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HHHHHhccChhhCcCHHHHhh
Confidence 999999999999999999976
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=304.28 Aligned_cols=193 Identities=27% Similarity=0.401 Sum_probs=168.5
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~E 421 (626)
.+.||+|+||.||+|+ ..+|+.||||.++... ...+..-+|+++|++++|||||++++.-.+. ....+|||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 4789999999999999 6789999999998755 3456778999999999999999999975443 34689999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC--CCCC--eEEeeccCccc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN--NNME--PCISEYGLIVT 497 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~--~~~~--~kl~DFGl~~~ 497 (626)
||++|||+..|..-++...|+..+.+.+..+++.||.||| ++|||||||||.||++- .+++ -||+|||.|+.
T Consensus 98 yC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr----En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR----ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred ecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH----HcCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 9999999999988777889999999999999999999999 68999999999999984 3333 59999999987
Q ss_pred cCCCc--cccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCC
Q 006903 498 ENHDQ--SFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNN 547 (626)
Q Consensus 498 ~~~~~--~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~ 547 (626)
.+.+. ....||..|.+||+.. ...|+..+|.|||||++||.+||..||..
T Consensus 174 l~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 174 LDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred CCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 65544 3467899999999988 48889999999999999999999999863
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=290.68 Aligned_cols=250 Identities=18% Similarity=0.165 Sum_probs=183.9
Q ss_pred ccccCCCcceEEEEeCCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 353 LLGRGKHGSLYRVVLDDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+|.|+++.||++.. +++.||||+++... ...+.+.+|++.++.++||||+++++++...+..+++|||+++|+|.
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 344445555555444 68999999987642 23357899999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--------
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-------- 501 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-------- 501 (626)
+++.... ...+++.....++.|++.||.||| +.+|+||||||+||+++.++.+|++|||.+......
T Consensus 88 ~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH----~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 88 DLLKTHF-PEGLPELAIAFILKDVLNALDYIH----SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 9997432 245888999999999999999999 679999999999999999999999999987532111
Q ss_pred --ccccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc-------c------
Q 006903 502 --QSFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW-------T------ 564 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-------~------ 564 (626)
.....++..|++||.... ..++.++|||||||++|||++|+.||.................. .
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCC
Confidence 112234557899998754 34688999999999999999999999754433322222111000 0
Q ss_pred cc-----cccHHH---HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 565 VE-----VFDEVL---IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 565 ~~-----~~d~~~---~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. ..++.. ............+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00 000000 000111223346788999999999999999999987
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=286.09 Aligned_cols=238 Identities=16% Similarity=0.211 Sum_probs=191.8
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||.|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLG 84 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCC
Confidence 478999999999999964 68999999997543 2346788999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~ 503 (626)
++|.+++.. ...+++.....++.+++.||.||| +++|+|+||||+||++++++.++++|||++...... ..
T Consensus 85 ~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lh----~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 157 (258)
T cd05578 85 GDLRYHLSQ---KVKFSEEQVKFWICEIVLALEYLH----SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTT 157 (258)
T ss_pred CCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcccc
Confidence 999999963 247889999999999999999999 679999999999999999999999999997653322 12
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc--hhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN--LATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
...++..|.+||......++.++|+||||+++|+|++|+.|+..... ....... .... . ...+...
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~-~----------~~~~~~~ 225 (258)
T cd05578 158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK-QETA-D----------VLYPATW 225 (258)
T ss_pred ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH-hccc-c----------ccCcccC
Confidence 33456678999998877789999999999999999999999875432 2222111 1110 0 0111222
Q ss_pred HHHHHHHHhhccCCCCCCCCCH--HHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSM--NQVA 607 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~--~ev~ 607 (626)
...+.+++.+||+.||.+||++ +|++
T Consensus 226 ~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 226 STEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 3568889999999999999999 5554
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=285.11 Aligned_cols=249 Identities=16% Similarity=0.195 Sum_probs=185.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCC-CCCccccceEEEeC--CeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSK--QEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~--~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|.. .+++.||+|+++... .......+|+..+.++. ||||+++++++.+. +..++||||++
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD 83 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC
Confidence 36799999999999984 568999999987543 22234567888888885 99999999999987 88999999997
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-- 502 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-- 502 (626)
|+|.+++... ...++|..+..++.|++.||.||| +.+|+||||||+||+++. +.+||+|||++.......
T Consensus 84 -~~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH----~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~ 155 (282)
T cd07831 84 -MNLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMH----RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY 155 (282)
T ss_pred -ccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH----HCCceecccCHHHEEEcC-CCeEEEecccccccccCCCc
Confidence 5888888642 246899999999999999999999 679999999999999999 999999999986543221
Q ss_pred cccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh---ccc-----------cccc
Q 006903 503 SFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR---EEW-----------TVEV 567 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~-----------~~~~ 567 (626)
....++..|++||... ....+.++|||||||++|||++|+.||...... +.+..... ... ....
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07831 156 TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL-DQIAKIHDVLGTPDAEVLKKFRKSRHMNY 234 (282)
T ss_pred CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH-HHHHHHHHHcCCCCHHHHHhhcccccccc
Confidence 2234567899999653 345688999999999999999999998643321 11111110 000 0000
Q ss_pred ccHHHHh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 568 FDEVLIA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 568 ~d~~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.... ..........+.+++.+||+.+|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 235 NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000000 0011223567899999999999999999999975
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=288.01 Aligned_cols=252 Identities=16% Similarity=0.184 Sum_probs=187.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCC-CCCccccceEEEeCCe-----EEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQE-----KLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~-----~~lv~ 420 (626)
.+.||+|+||.||+|.. .+++.||+|.++.... ....+.+|+.+++.++ ||||+++++++...+. .|+||
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~ 85 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVF 85 (295)
T ss_pred eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEe
Confidence 46899999999999995 4689999998865432 2357888999999995 6999999999887665 89999
Q ss_pred eecCCCChhHhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCccc
Q 006903 421 EYQPNGSLFNLLHGSEN--GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVT 497 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~ 497 (626)
||+++ +|.+++..... ...+++..+..++.||+.||.||| +++|+||||||+||+++. ++.+||+|||++..
T Consensus 86 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH----~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 86 EYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH----KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred eccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 99985 89888864322 346899999999999999999999 679999999999999998 88999999999764
Q ss_pred cCCCc---cccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc-cccc----
Q 006903 498 ENHDQ---SFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT-VEVF---- 568 (626)
Q Consensus 498 ~~~~~---~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~---- 568 (626)
..... ....++..|++||.... ..++.++||||||+++|||+||+.||.......+..+........ ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 32211 11234567899997643 456889999999999999999999987544433322211100000 0000
Q ss_pred -----------cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 569 -----------DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 569 -----------d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+... ....+.....+.+++.+||+.||++||++.|++.
T Consensus 241 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 241 KLRDWHEFPQWKPQDL-SRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hccchhhcCcccchhH-HHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000 0011123456889999999999999999999875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=290.01 Aligned_cols=241 Identities=21% Similarity=0.327 Sum_probs=191.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||++.. .++..||+|.+.... ...+.+.+|+.++++++||||+++++++...+..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L 103 (293)
T cd06647 24 FEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSL 103 (293)
T ss_pred eeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcH
Confidence 36799999999999984 568899999986543 3346788999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++.. ..+++..+..++.+++.||.||| +++++||||||+||+++.++.+||+|||++...... ....
T Consensus 104 ~~~~~~----~~l~~~~~~~i~~~l~~al~~LH----~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~ 175 (293)
T cd06647 104 TDVVTE----TCMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 175 (293)
T ss_pred HHHHhh----cCCCHHHHHHHHHHHHHHHHHHH----hCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccc
Confidence 999853 35789999999999999999999 679999999999999999999999999987543221 1223
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++|||||||++||+++|+.||........ +........ .. + .........+
T Consensus 176 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~~~~~~~-~~-~-------~~~~~~~~~l 245 (293)
T cd06647 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIATNGT-PE-L-------QNPEKLSAIF 245 (293)
T ss_pred cCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eeehhcCCC-CC-C-------CCccccCHHH
Confidence 456678999988777778999999999999999999999975432211 111111100 00 0 0111223457
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+++.+||+.+|++||++.+++.+
T Consensus 246 ~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 246 RDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHHHHccCChhhCcCHHHHhcC
Confidence 789999999999999999999875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=288.83 Aligned_cols=239 Identities=16% Similarity=0.247 Sum_probs=197.3
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|.|..|-.|+ .-+|..||||++.+... ....+.+|++.|+-++|||||+++++..+...+|||+|.-.+|
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~G 102 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGG 102 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCc
Confidence 4679999999999887 56899999999987653 3457889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC-CCCCeEEeeccCcccc--CCCcc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN-NNMEPCISEYGLIVTE--NHDQS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGl~~~~--~~~~~ 503 (626)
+|++|+- +....+.+....+++.||..|+.|+| ...+|||||||+||.+- +-|-+|+.|||++-.. .....
T Consensus 103 Dl~DyIm--KHe~Gl~E~La~kYF~QI~~AI~YCH----qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~ 176 (864)
T KOG4717|consen 103 DLFDYIM--KHEEGLNEDLAKKYFAQIVHAISYCH----QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT 176 (864)
T ss_pred hHHHHHH--hhhccccHHHHHHHHHHHHHHHHHHh----hhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhh
Confidence 9999996 34457889999999999999999999 46799999999998764 5788999999997543 23335
Q ss_pred ccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
..+|...|.+||++.+..| .+++||||+|||||.|++|++||....+.. -+..++...+. .+....
T Consensus 177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE-TLTmImDCKYt------------vPshvS 243 (864)
T KOG4717|consen 177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE-TLTMIMDCKYT------------VPSHVS 243 (864)
T ss_pred cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-hhhhhhccccc------------Cchhhh
Confidence 5678889999999877666 578999999999999999999998554332 22333333322 233345
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.++.+||..|+..||.+|.+.+||+.
T Consensus 244 ~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 244 KECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred HHHHHHHHHHHhcCchhhccHHHHhc
Confidence 56889999999999999999999976
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=284.97 Aligned_cols=250 Identities=17% Similarity=0.194 Sum_probs=188.6
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
+.||+|++|.||+|.. .+|..||+|++..... ..+.+.+|++++++++|||++++++++...+..+++|||++ ++
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~ 83 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LD 83 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cC
Confidence 6799999999999985 5799999999875432 23568899999999999999999999999999999999995 68
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---SF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~~ 504 (626)
|.+++.... ...+++..+..++.|+++||+||| +++++||||+|+||+++.++.++++|||++....... ..
T Consensus 84 l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH----~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 84 LKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCH----SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred HHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 999986432 246899999999999999999999 6799999999999999999999999999986432211 11
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc-ccccc--------c--HHH
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW-TVEVF--------D--EVL 572 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~--------d--~~~ 572 (626)
..++..|++||.... ..++.++||||||+++|||+||+.||.......+... ..+... ..... + ...
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFR-IFRTLGTPDEDVWPGVTSLPDYKPTF 237 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHhCCCChHHhhhhhhchhhhhhc
Confidence 234667899997644 3468899999999999999999999875433322211 111000 00000 0 000
Q ss_pred H------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 I------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. .....+.....+.+++.+||+.+|++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 238 PKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred ccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 00001112245789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=278.03 Aligned_cols=242 Identities=24% Similarity=0.376 Sum_probs=196.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||++... +++.+++|++..... ..+.+.+|++.+++++|||++++++++......++++||+++++|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 84 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSL 84 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcH
Confidence 367999999999999964 689999999976543 457899999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--SFLA 506 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~~~~ 506 (626)
.+++... ...+++..+..++.+++.||.||| ..+++||||+|+||++++++.++|+|||.+....... ....
T Consensus 85 ~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh----~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 158 (253)
T cd05122 85 KDLLKST--NQTLTESQIAYVCKELLKGLEYLH----SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV 158 (253)
T ss_pred HHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhh----cCCEecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence 9999643 257899999999999999999999 6899999999999999999999999999986654432 3445
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
++..|++||.......+.++||||||+++|||++|+.|+......... ....... ...... .......+.
T Consensus 159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~-~~~~~~--------~~~~~~~~~ 228 (253)
T cd05122 159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL-FKIATNG-PPGLRN--------PEKWSDEFK 228 (253)
T ss_pred cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH-HHHHhcC-CCCcCc--------ccccCHHHH
Confidence 677899999887777889999999999999999999998754222211 1111111 111100 011134588
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 006903 587 QVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+++.+||+.||++|||+.|+++
T Consensus 229 ~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 229 DFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHHHHccCChhhCCCHHHHhc
Confidence 8999999999999999999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=284.81 Aligned_cols=250 Identities=20% Similarity=0.261 Sum_probs=189.6
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|... +++.+|+|++.... ...+.+.+|++++++++|||++++++++... +..++||||++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD 83 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc
Confidence 367999999999999854 58999999998653 2345788999999999999999999999887 78999999997
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-- 502 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-- 502 (626)
+ +|.+++... ...+++..++.++.+++.||+||| ..+++|+||||+||++++++.+|++|||++.......
T Consensus 84 ~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH----~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~ 156 (287)
T cd07840 84 H-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLH----SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA 156 (287)
T ss_pred c-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc
Confidence 5 899888632 247899999999999999999999 5799999999999999999999999999986543321
Q ss_pred --cccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-------ccc--cc----
Q 006903 503 --SFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-------EWT--VE---- 566 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-------~~~--~~---- 566 (626)
.....+..|++||... ...++.++||||||+++|||+||+.||..... .......... .+. ..
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07840 157 DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE-LEQLEKIFELCGSPTDENWPGVSKLPWF 235 (287)
T ss_pred cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchhhccccccchhh
Confidence 2223456789999654 34568899999999999999999999864332 2222221110 000 00
Q ss_pred ------cccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 ------VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 ------~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+....+.....+...+.+++.+||+.+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 236 ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000000011112456889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=286.52 Aligned_cols=248 Identities=17% Similarity=0.179 Sum_probs=176.5
Q ss_pred ccccccCCCcceEEEEeCC----CcEEEEEEcCCCCCC--HH----------HHHHHHHHhccCCCCCccccceEEEeCC
Q 006903 351 AELLGRGKHGSLYRVVLDD----GLMLAVKRLRDWSIS--SE----------DFKNRMQKIDHVKHPNVLPPLAYYCSKQ 414 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~~--~~----------~~~~ei~~l~~l~H~nIv~l~g~~~~~~ 414 (626)
.+.||+|+||.||+|...+ +..+|+|........ .+ ....+...+..+.|+||+++++++....
T Consensus 17 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~ 96 (294)
T PHA02882 17 DKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKR 96 (294)
T ss_pred eeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEec
Confidence 4789999999999998543 456677754322211 11 1223344566789999999998765543
Q ss_pred ----eEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEe
Q 006903 415 ----EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCIS 490 (626)
Q Consensus 415 ----~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~ 490 (626)
..++++|++.. ++.+.+.. ....++..+..++.|++.||+||| +.+|+||||||+|||++.++.++|+
T Consensus 97 ~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~iiHrDiKp~Nill~~~~~~~l~ 168 (294)
T PHA02882 97 CRMYYRFILLEKLVE-NTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIH----EHGISHGDIKPENIMVDGNNRGYII 168 (294)
T ss_pred CCceEEEEEEehhcc-CHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCcEEEE
Confidence 34678887753 66666642 234578888999999999999999 6799999999999999999999999
Q ss_pred eccCccccCC----------CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh
Q 006903 491 EYGLIVTENH----------DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR 560 (626)
Q Consensus 491 DFGl~~~~~~----------~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~ 560 (626)
|||+++.... ......++..|++||......++.++|||||||++|||++|+.||.........++....
T Consensus 169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~ 248 (294)
T PHA02882 169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC 248 (294)
T ss_pred EcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH
Confidence 9999864321 112235788999999988888999999999999999999999999754222222221111
Q ss_pred cccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 561 EEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 561 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
+ ........... .......+.+++..||+.+|++||++.++.+.|+
T Consensus 249 ~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 249 D-FIKRLHEGKIK----IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred H-HHHHhhhhhhc----cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 1 00011111111 1122455889999999999999999999998763
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=284.86 Aligned_cols=249 Identities=17% Similarity=0.257 Sum_probs=191.5
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
+.||+|++|.||+|.. .+++.+|+|++...... ...+.+|++++++++|+||+++++++..++..++||||+++ +
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~ 83 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-D 83 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-C
Confidence 6799999999999985 47899999998755432 45788999999999999999999999999999999999975 8
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---SF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~~ 504 (626)
|.+++... ...+++..+..++.+++.||.||| +.+|+|+||||+||++++++.+||+|||.+....... ..
T Consensus 84 l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 84 LYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCH----SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred HHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHH----HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 88888642 257899999999999999999999 6799999999999999999999999999976543322 12
Q ss_pred cccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-cc-----cccccc--------
Q 006903 505 LAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-EW-----TVEVFD-------- 569 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-~~-----~~~~~d-------- 569 (626)
..++..|++||..... ..+.++||||||+++|||+||+.||......... ...... .. .....+
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQL-FKIFRTLGTPDPEVWPKFTSLARNYKFS 236 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHcCCCchHhcccchhhhhhhhhh
Confidence 3356678999987655 6789999999999999999999988654332222 111110 00 000000
Q ss_pred ---H-HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 570 ---E-VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 570 ---~-~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. ........+.....+.+++.+||+.||.+||++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0 00001112234557889999999999999999999975
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=283.89 Aligned_cols=252 Identities=18% Similarity=0.208 Sum_probs=190.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|++|.||+|+. .+|+.||||.++.... ..+.+.+|++++++++||||+++++++...+..++||||+++ +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~ 83 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-D 83 (284)
T ss_pred eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-c
Confidence 36899999999999996 4689999999876432 345678899999999999999999999999999999999985 8
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---SF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~~ 504 (626)
|.+++........+++..+..++.|++.||.||| +.+|+||||||+||++++++.++++|||++....... ..
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 84 LKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH----ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred HHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 9988865443456899999999999999999999 6799999999999999999999999999986432211 12
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc-c-c---------ccccHHH
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW-T-V---------EVFDEVL 572 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~-~---------~~~d~~~ 572 (626)
..++..|++||.... ..++.++|||||||++|||++|+.||...... +.......... . . ..+....
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRIMGTPTESTWPGISQLPEYKPTF 238 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhHHHHhcCchhcccc
Confidence 234667899997644 34688999999999999999999998754322 21111111000 0 0 0000000
Q ss_pred ------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 ------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.....+.+++.+|++.||++||++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000011122345789999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=271.91 Aligned_cols=242 Identities=18% Similarity=0.284 Sum_probs=189.4
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
..||.|..|.|++++. .+|..+|||.+..... ..+.+...+.++.+- ..|.||+.+|||..+...++.||.|.. .
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C 176 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-C 176 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-H
Confidence 6799999999999995 5699999999987552 234566677766554 489999999999999999999999953 5
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc--CCCcccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE--NHDQSFL 505 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~--~~~~~~~ 505 (626)
+..+|+.. .+++++...=++...+.+||.||.+ +++|+|||+||+|||+|+.|++|+||||++... ....+..
T Consensus 177 ~ekLlkri--k~piPE~ilGk~tva~v~AL~YLKe---KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrs 251 (391)
T KOG0983|consen 177 AEKLLKRI--KGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRS 251 (391)
T ss_pred HHHHHHHh--cCCchHHhhhhhHHHHHHHHHHHHH---hcceeecccCccceEEccCCCEEeecccccceeecccccccc
Confidence 66666532 3568877777899999999999996 679999999999999999999999999997542 2334556
Q ss_pred ccccccchhhcccc---CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 506 AQTSSLKINDISNQ---MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 506 ~~~~~~~~pe~~~~---~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
+|-+.||+||.+.. ..|+.++|||||||+++||+||+.||.....-.+.+..+..++. +.+.... ...
T Consensus 252 AGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP------P~L~~~~---gFS 322 (391)
T KOG0983|consen 252 AGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP------PLLPGHM---GFS 322 (391)
T ss_pred cCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC------CCCCccc---CcC
Confidence 78889999997643 35788999999999999999999999866555555555554332 1111111 123
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++..||..|+.+||...++++
T Consensus 323 p~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 323 PDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HHHHHHHHHHhhcCcccCcchHHHhc
Confidence 45888999999999999999887654
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=284.80 Aligned_cols=241 Identities=18% Similarity=0.198 Sum_probs=185.7
Q ss_pred cccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 354 LGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 354 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
||+|+||+||++.. .+|+.||+|.+.... ...+.+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999984 568999999986533 1234567899999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--ccccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QSFLA 506 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~~~~ 506 (626)
.+++.... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.+|++|||++...... .....
T Consensus 81 ~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH----~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVG-EPGFPEARAIFYAAQIICGLEHLH----QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRA 155 (277)
T ss_pred HHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccccc
Confidence 99996432 246899999999999999999999 679999999999999999999999999987653221 12234
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
++..|++||......++.++|||||||++|||++|+.||.......... ...... ... . ...+......+.
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~-~~~--~-----~~~~~~~~~~~~ 226 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKE-ELKRRT-LEM--A-----VEYPDKFSPEAK 226 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHH-HHHhcc-ccc--c-----ccCCccCCHHHH
Confidence 5667899998877778899999999999999999999986432211100 000000 000 0 001112234578
Q ss_pred HHHhhccCCCCCCCC-----CHHHHHH
Q 006903 587 QVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
+++.+||+.+|++|| ++.+++.
T Consensus 227 ~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 227 DLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHHccCChhHccCCCcccHHHHHh
Confidence 899999999999999 5555654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=283.03 Aligned_cols=240 Identities=19% Similarity=0.279 Sum_probs=190.7
Q ss_pred cccCCCcceEEEEeC-CCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 354 LGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 354 lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
||+|+||.||+++.. +|+.+|+|.+..... ..+.+.+|++++++++||||+++++.+...+..+++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999965 599999999875442 235688999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-------
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD------- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~------- 501 (626)
.+++... ..+++..+..++.|++.||+||| +.+|+||||+|+||++++++.++++|||++......
T Consensus 81 ~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH----~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENV---GSLDEDVARIYIAEIVLALEYLH----SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH----HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 9999642 36899999999999999999999 679999999999999999999999999997643221
Q ss_pred ----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 502 ----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 502 ----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
.....++..|++||.......+.++||||||+++||++||+.||.... ..+............. .
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~----------~ 222 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET-PEEIFQNILNGKIEWP----------E 222 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhcCCcCCC----------c
Confidence 122345667899998877778889999999999999999999986433 2233333222111000 0
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
.......+.+++.+||+.+|++|||+.++.+.|+
T Consensus 223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 223 DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0001345789999999999999999966655554
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=326.33 Aligned_cols=241 Identities=23% Similarity=0.300 Sum_probs=193.9
Q ss_pred cccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 350 PAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
-+..||.|.||.||.|. .++|+..|+|.++-... ......+|+.++..++|||+|+++|+-.+++..+|.||||++
T Consensus 1239 rg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~ 1318 (1509)
T KOG4645|consen 1239 RGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEG 1318 (1509)
T ss_pred cccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhcc
Confidence 45789999999999998 78899999998875543 335678999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+.+. .+...++.....+..|++.|++||| +.|||||||||+||+|+.+|.+|.+|||.|.......
T Consensus 1319 GsLa~ll~---~gri~dE~vt~vyt~qll~gla~LH----~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1319 GSLASLLE---HGRIEDEMVTRVYTKQLLEGLAYLH----EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred CcHHHHHH---hcchhhhhHHHHHHHHHHHHHHHHH----hcCceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence 99999994 4455677777889999999999999 6799999999999999999999999999986543221
Q ss_pred ----cccccccccchhhccccCC---CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 503 ----SFLAQTSSLKINDISNQMC---STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 503 ----~~~~~~~~~~~pe~~~~~~---~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
....||+.|||||++.+.. ..-++||||+|||++||+||+.||.+-.+....+..+..... +
T Consensus 1392 ~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~-----------P 1460 (1509)
T KOG4645|consen 1392 PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHK-----------P 1460 (1509)
T ss_pred CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCC-----------C
Confidence 2357899999999875432 356899999999999999999999754444333333332221 1
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..++.....-.+++.+|++.||++|-++.|+++
T Consensus 1461 q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1461 QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 122223344678888999999999988876654
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=278.46 Aligned_cols=241 Identities=21% Similarity=0.285 Sum_probs=195.8
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~Ey~~ 424 (626)
.+.||+|++|.||+|... +++.|++|.+..... ..+.+.+|++.+++++||||+++++.+... +..+++|||++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 84 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVS 84 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecC
Confidence 367999999999999965 789999999876542 346788999999999999999999999888 88999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
+++|.+++... ..+++..+..++.+++.||+||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 85 ~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh----~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 85 GGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAYLH----SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999642 37899999999999999999999 579999999999999999999999999997654332
Q ss_pred --ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 502 --QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
.....++..|.+||.......+.++||||||+++|||++|+.||....+................ .+.
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~ 227 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPE----------IPE 227 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcC----------CCc
Confidence 22345667789999887777899999999999999999999998754422222222221111111 112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+.+++.+|++.+|++||++.|+++
T Consensus 228 ~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 228 HLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 22456888999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=286.36 Aligned_cols=249 Identities=18% Similarity=0.189 Sum_probs=187.5
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|... +++.+|+|.++..... ...+.+|++++++++||||+++++++... +..++||||++
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~ 89 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE 89 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC
Confidence 368999999999999964 6899999999754322 23567899999999999999999998877 88999999997
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 90 -~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH----~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 162 (293)
T cd07843 90 -HDLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLH----DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKP 162 (293)
T ss_pred -cCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccc
Confidence 4999988642 236899999999999999999999 679999999999999999999999999997654332
Q ss_pred ccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc-----------------
Q 006903 502 QSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW----------------- 563 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~----------------- 563 (626)
.....++..|++||..... ..+.++|+||||+++|||++|+.||...... +....+.....
T Consensus 163 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (293)
T cd07843 163 YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-DQLNKIFKLLGTPTEKIWPGFSELPGAK 241 (293)
T ss_pred cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchHHHHHhhccchhc
Confidence 1223356678999976543 4588999999999999999999998644322 11111111000
Q ss_pred ---ccccccHHHHhhhccHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 564 ---TVEVFDEVLIAEAASEE-RMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 564 ---~~~~~d~~~~~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
........+ ....... ....+.+++.+||+.+|++|||+.|++.
T Consensus 242 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 242 KKTFTKYPYNQL-RKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccccccccchhh-hccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000 0001111 2445788999999999999999999975
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=281.85 Aligned_cols=242 Identities=17% Similarity=0.202 Sum_probs=184.9
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC-H---HHHHHHHHH-hccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS-S---EDFKNRMQK-IDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~-~---~~~~~ei~~-l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|.. .+++.||+|.++..... . ..+..|..+ ....+|+||+++++++...+..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4699999999999985 56899999998754321 1 234445444 4456899999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||+|+||++++++.+|++|||++...... ...
T Consensus 82 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-~~~ 153 (260)
T cd05611 82 GDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLH----QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN-KKF 153 (260)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCcEEEeecccceecccc-ccC
Confidence 999999953 246889999999999999999999 679999999999999999999999999998654332 223
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++||||||+++|||+||+.||..... .............. .. .........+
T Consensus 154 ~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~---~~-----~~~~~~~~~~ 224 (260)
T cd05611 154 VGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP-DAVFDNILSRRINW---PE-----EVKEFCSPEA 224 (260)
T ss_pred CCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcccCC---CC-----cccccCCHHH
Confidence 456778999988777788999999999999999999999864332 22222222111000 00 0111223458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
.+++.+||+.+|++||++.++.+.|
T Consensus 225 ~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 225 VDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHHccCCHHHccCCCcHHHHH
Confidence 8999999999999999776554443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=283.64 Aligned_cols=239 Identities=21% Similarity=0.299 Sum_probs=189.0
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCC---CCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVK---HPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~---H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|.. .+++.||+|.++... ...+++.+|++++++++ |||++++++++......++||||+++
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~ 86 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEG 86 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCC
Confidence 6799999999999995 578999999987543 23457889999998886 99999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---c
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---Q 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~ 502 (626)
++|.++++. ..+++.....++.+++.||.||| ..+|+||||+|+||++++++.++++|||++...... .
T Consensus 87 ~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh----~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 87 GSVRTLMKA----GPIAEKYISVIIREVLVALKYIH----KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred CcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence 999999853 26899999999999999999999 679999999999999999999999999997653322 1
Q ss_pred cccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 SFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||.... ..++.++|||||||++|||++|+.||.... ........... .. +.+.. ...
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~-~~~~~~~~~~~-~~-----~~~~~----~~~ 227 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD-AFRAMMLIPKS-KP-----PRLED----NGY 227 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC-hhhhhhccccC-CC-----CCCCc----ccC
Confidence 22346667899997653 446889999999999999999999986432 22221111111 00 00100 113
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...+.+++.+||+.||++||++.|+++.
T Consensus 228 ~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 228 SKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 3458889999999999999999999763
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=284.82 Aligned_cols=239 Identities=18% Similarity=0.286 Sum_probs=190.2
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
..||+|+||.||++.. .+++.||||++.... ...+.+.+|+.+++.++|+||+++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5799999999999985 578999999986543 23456889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~~ 506 (626)
+++.. ..+++.....++.|++.||+||| +.||+||||||+||++++++.++++|||++...... .....
T Consensus 106 ~~~~~----~~~~~~~~~~~~~ql~~~l~~lH----~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 177 (292)
T cd06657 106 DIVTH----TRMNEEQIAAVCLAVLKALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV 177 (292)
T ss_pred HHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccc
Confidence 98842 35789999999999999999999 679999999999999999999999999987543221 12234
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
++..|++||......++.++|||||||++|||++|+.||..... .+........ .... +. ........+.
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~-~~~~~~~~~~-~~~~-~~-------~~~~~~~~l~ 247 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-LKAMKMIRDN-LPPK-LK-------NLHKVSPSLK 247 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhh-CCcc-cC-------CcccCCHHHH
Confidence 56779999988777788999999999999999999999864322 2222211111 0000 00 0011233477
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 006903 587 QVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+++.+||+.+|.+||++.+++.
T Consensus 248 ~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 248 GFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHhCCcccCcCHHHHhc
Confidence 8899999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=279.62 Aligned_cols=250 Identities=20% Similarity=0.305 Sum_probs=197.2
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeC-CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK-QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-~~~~lv~E 421 (626)
..++-+|.||.||+|.+. +.+.|-+|.++.... .-..+..|--.+..+.|||+..+.+.+..+ ...+++|.
T Consensus 289 ~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~ 368 (563)
T KOG1024|consen 289 SCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYP 368 (563)
T ss_pred hhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEe
Confidence 467899999999999654 345677787765432 224578888889999999999999988764 56789999
Q ss_pred ecCCCChhHhhc-----CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 422 YQPNGSLFNLLH-----GSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 422 y~~~g~L~~~l~-----~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
++.-|+|..+|. +....+.++-.+...++.|++.|++||| +.+|||.||..+|++||+...+|++|-.+++
T Consensus 369 ~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh----~~~ViHkDiAaRNCvIdd~LqVkltDsaLSR 444 (563)
T KOG1024|consen 369 ATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH----NHGVIHKDIAARNCVIDDQLQVKLTDSALSR 444 (563)
T ss_pred ccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH----hcCcccchhhhhcceehhheeEEeccchhcc
Confidence 999999999997 3233456777888999999999999999 6799999999999999999999999999988
Q ss_pred ccCCCcccc-----ccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 497 TENHDQSFL-----AQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 497 ~~~~~~~~~-----~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
......... ..+..||++|.+....++..+|||||||+||||+| |+.|+.+ .+..+... ...+++..
T Consensus 445 DLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae-IDPfEm~~-ylkdGyRl----- 517 (563)
T KOG1024|consen 445 DLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE-IDPFEMEH-YLKDGYRL----- 517 (563)
T ss_pred ccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc-cCHHHHHH-HHhcccee-----
Confidence 654433222 23556899999998999999999999999999999 7778752 33333322 22222221
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
..+-+|+.+++.+|..||...|++||+++|++..|.++...
T Consensus 518 -----aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 518 -----AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred -----cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 12345667799999999999999999999999999988654
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=283.17 Aligned_cols=238 Identities=18% Similarity=0.190 Sum_probs=182.1
Q ss_pred ccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHHH---HHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 353 LLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNRM---QKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~ei---~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
+||+|+||.||++.. .+++.||+|.+...... ...+..|. +.++...||||+++.+++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999985 56899999998754321 12233443 34455689999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-Ccc
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-DQS 503 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~~~ 503 (626)
+|+|.+++.. ...+++..+..++.|+++||.||| +++|+||||||+||++++++.+|++|||++..... ...
T Consensus 81 g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 153 (278)
T cd05606 81 GGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 153 (278)
T ss_pred CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCc
Confidence 9999998853 346899999999999999999999 67999999999999999999999999999764322 222
Q ss_pred ccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchh-HHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 504 FLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLA-TWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
...++..|++||.... ..++.++|||||||++|||++|+.||....... ......... . .. ..+...
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~-----~~-----~~~~~~ 222 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-M-----AV-----ELPDSF 222 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc-c-----CC-----CCCCcC
Confidence 3456788999998753 357889999999999999999999987432111 111111000 0 00 011112
Q ss_pred HHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
...+.+++.+|+..+|++|| ++.++++
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 34588889999999999999 9999975
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=285.43 Aligned_cols=245 Identities=18% Similarity=0.279 Sum_probs=186.6
Q ss_pred ccccccCCCcceEEEEeCC-CcEEEEEEcCCCCC--CHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLDD-GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|...+ ++.||||.++.... ...++.+|+.++.+.. ||||+++++++......+++|||++ +
T Consensus 20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~ 98 (296)
T cd06618 20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-T 98 (296)
T ss_pred eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-c
Confidence 4789999999999999764 89999999975432 2345677777666665 9999999999999999999999985 4
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--SF 504 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~~ 504 (626)
++.+++... ...+++..+..++.+++.||+|||+ .++|+||||+|+||++++++.+||+|||++....... ..
T Consensus 99 ~l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~---~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (296)
T cd06618 99 CLDKLLKRI--QGPIPEDILGKMTVAIVKALHYLKE---KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTR 173 (296)
T ss_pred CHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccC
Confidence 777776532 2478999999999999999999994 2589999999999999999999999999976432211 22
Q ss_pred cccccccchhhccccCC----CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 505 LAQTSSLKINDISNQMC----STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~----~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
..++..|++||...... ++.++||||||+++|||++|+.||.......+........... ... ....
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~ 244 (296)
T cd06618 174 SAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP-SLP--------PNEG 244 (296)
T ss_pred CCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCC-CCC--------CCCC
Confidence 23556789999875443 6789999999999999999999986533322333322222110 000 0011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
....+.+++.+||+.||++||++.+++.+-
T Consensus 245 ~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 245 FSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 234588899999999999999999998753
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=277.70 Aligned_cols=239 Identities=22% Similarity=0.361 Sum_probs=193.7
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||++... +++.||+|.+..... ..+.+.+|++++++++|||++++++++...+..+++|||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENG 84 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCC
Confidence 478999999999999854 688999999987653 3357899999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---S 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~ 503 (626)
+|.+++... ..+++..+..++.+++.||.||| +.||+||||||+||+++.++.++|+|||++....... .
T Consensus 85 ~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (254)
T cd06627 85 SLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLH----EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA 157 (254)
T ss_pred cHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence 999999632 56899999999999999999999 6799999999999999999999999999986543322 2
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...++..|.+||.......+.++||||+|+++|||++|+.|+............. ... .. ..+.....
T Consensus 158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~-~~----------~~~~~~~~ 225 (254)
T cd06627 158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-QDD-HP----------PLPEGISP 225 (254)
T ss_pred ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-ccC-CC----------CCCCCCCH
Confidence 2345677999998777778899999999999999999999987543322222111 110 00 01111234
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+++.+||+.+|++||++.|++.
T Consensus 226 ~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 226 ELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHHHHHHHhCChhhCcCHHHHhc
Confidence 5788999999999999999999874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=286.58 Aligned_cols=251 Identities=19% Similarity=0.199 Sum_probs=186.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|.. .+|+.||+|.++.... ....+.+|+.++++++|+||+++++++... +..++||||+.
T Consensus 12 ~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 91 (309)
T cd07845 12 LNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE 91 (309)
T ss_pred eeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC
Confidence 36799999999999995 5699999999864432 223567899999999999999999998754 46899999997
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
+ +|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+|||++......
T Consensus 92 ~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~ 164 (309)
T cd07845 92 Q-DLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLH----ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP 164 (309)
T ss_pred C-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCC
Confidence 4 888888632 256899999999999999999999 679999999999999999999999999998654322
Q ss_pred ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-cc-cccc---c-----H
Q 006903 502 QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-WT-VEVF---D-----E 570 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-~~-~~~~---d-----~ 570 (626)
......+..|++||.... ..++.++|||||||++|||++|+.||..... .+.+..+.... .. .... + .
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
T cd07845 165 MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE-IEQLDLIIQLLGTPNESIWPGFSDLPLVG 243 (309)
T ss_pred CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCChhhchhhhcccccc
Confidence 122234567899998654 4568899999999999999999999875433 22222221100 00 0000 0 0
Q ss_pred H--HHh------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 571 V--LIA------EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 571 ~--~~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
. ... ..........+.+++.+|++.||++|||+.|++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 244 KFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 000 00001123457889999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-33 Score=311.34 Aligned_cols=248 Identities=20% Similarity=0.340 Sum_probs=200.1
Q ss_pred ccccccCCCcceEEEEeC----C----CcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEE
Q 006903 351 AELLGRGKHGSLYRVVLD----D----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLV 419 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~----~----g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv 419 (626)
.+.||+|.||.|++|... . ...||||.++.... ..+.+..|+++|..+ +|+||+.++|+|..++..++|
T Consensus 301 ~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v 380 (609)
T KOG0200|consen 301 GKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVI 380 (609)
T ss_pred cceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEE
Confidence 458999999999999732 1 45799999986553 346799999999988 599999999999998999999
Q ss_pred EeecCCCChhHhhcCCC-----CC--------CCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC
Q 006903 420 YEYQPNGSLFNLLHGSE-----NG--------QSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME 486 (626)
Q Consensus 420 ~Ey~~~g~L~~~l~~~~-----~~--------~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~ 486 (626)
+||+..|+|.++|+..+ .. ..++....+.++.|||.|++||+ +.++|||||..+|||+.++..
T Consensus 381 ~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~----~~~~vHRDLAaRNVLi~~~~~ 456 (609)
T KOG0200|consen 381 VEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA----SVPCVHRDLAARNVLITKNKV 456 (609)
T ss_pred EEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh----hCCccchhhhhhhEEecCCCE
Confidence 99999999999998654 00 23888999999999999999999 678999999999999999999
Q ss_pred eEEeeccCccccCCCcccc-c-----cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 487 PCISEYGLIVTENHDQSFL-A-----QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 487 ~kl~DFGl~~~~~~~~~~~-~-----~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
+||+|||+++.......+. . -+..|||||.+....++.|+|||||||+||||+| |..|+.+-....+.++ ..
T Consensus 457 ~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~-~l 535 (609)
T KOG0200|consen 457 IKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLE-FL 535 (609)
T ss_pred EEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH-HH
Confidence 9999999998654433332 1 1345999999988899999999999999999999 6667654221333322 33
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
+.+...+ .+..+..+++++|..||+.+|++||++.++++.++..
T Consensus 536 ~~G~r~~----------~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 536 KEGNRME----------QPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred hcCCCCC----------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 3333222 2334456689999999999999999999999999884
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=291.42 Aligned_cols=249 Identities=18% Similarity=0.262 Sum_probs=187.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||.||+|.. .+++.||+|.+..... ..+.+.+|+.++++++||||+++++++... ...++||
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 100 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVM 100 (353)
T ss_pred EEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEE
Confidence 47899999999999984 5799999999865332 234677899999999999999999987643 3469999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+. ++|.+.+.. .+++..+..++.|++.||+||| ..||+||||||+||+++.++.+||+|||++.....
T Consensus 101 e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH----~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 101 ELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred eccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 9996 588888752 2788899999999999999999 67999999999999999999999999999875433
Q ss_pred Cc--cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc-c------------
Q 006903 501 DQ--SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT-V------------ 565 (626)
Q Consensus 501 ~~--~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-~------------ 565 (626)
.. ....++..|++||......++.++|||||||++|||++|+.||........+......-... .
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (353)
T cd07850 171 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRN 250 (353)
T ss_pred CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhH
Confidence 22 12345678999999888888999999999999999999999987543322221110000000 0
Q ss_pred --------------ccccHHHHh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 566 --------------EVFDEVLIA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 566 --------------~~~d~~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+.+...... ..........+.+++.+||+.||++|||+.|++..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 251 YVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 00011234467899999999999999999999863
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-33 Score=290.73 Aligned_cols=250 Identities=16% Similarity=0.220 Sum_probs=186.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEe----CCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCS----KQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~----~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|+.++++++||||+++++++.. ....++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 89 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDL 89 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEeh
Confidence 36799999999999984 569999999987543 234567889999999999999999998763 3467999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
+. |+|.+++.. ...+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||++.......
T Consensus 90 ~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 90 ME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIH----SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred hh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 96 689999853 345899999999999999999999 6799999999999999999999999999975432111
Q ss_pred -------cccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-c-ccccccc---
Q 006903 503 -------SFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-E-WTVEVFD--- 569 (626)
Q Consensus 503 -------~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-~-~~~~~~d--- 569 (626)
....++..|.+||.... ..++.++|||||||++|||++|+.||........ +...... . ...+..+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~-~~~~~~~~g~~~~~~~~~~~ 240 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ-LKLILSVLGSPSEEVLNRIG 240 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH-HHHHHHHhCCChhHhhhhhc
Confidence 12345677899997644 4578899999999999999999999964432211 1111100 0 0000000
Q ss_pred -HHH-------H------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 570 -EVL-------I------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 570 -~~~-------~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
... . .....+.....+.+++.+||+.+|++||++.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 241 SDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000 0 000011234568899999999999999999998873
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=283.37 Aligned_cols=252 Identities=15% Similarity=0.141 Sum_probs=186.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+|+.||+|.+..... ..+.+.+|++++++++||||+++++++...+..++||||++ +
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 85 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-L 85 (294)
T ss_pred EEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-c
Confidence 36799999999999985 4789999999865432 23568899999999999999999999999999999999996 5
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCccccCCCc---
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~~~~~--- 502 (626)
+|.+++... ....+++.....++.|++.||+||| +++|+||||||+||+++. ++.+||+|||++.......
T Consensus 86 ~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH----~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~ 160 (294)
T PLN00009 86 DLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCH----SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF 160 (294)
T ss_pred cHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcccc
Confidence 888887532 2334678888899999999999999 679999999999999985 5578999999986432221
Q ss_pred cccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-ccccccc-------cHHH-
Q 006903 503 SFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-EWTVEVF-------DEVL- 572 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-~~~~~~~-------d~~~- 572 (626)
....++..|++||.... ..++.++|||||||++|||+||+.||..........+..... ......+ +...
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (294)
T PLN00009 161 THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSA 240 (294)
T ss_pred ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhh
Confidence 12234667899997654 456889999999999999999999987544333222211000 0000000 0000
Q ss_pred -------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 -------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 -------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.....+.+++.+|++.+|++||++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 241 FPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000001112345788999999999999999999986
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-33 Score=286.66 Aligned_cols=191 Identities=20% Similarity=0.262 Sum_probs=157.7
Q ss_pred ccccccCCCcceEEEEeC---CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVLD---DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~E 421 (626)
.+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.++++++||||+++++++... +..++|||
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 84 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFD 84 (316)
T ss_pred EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEe
Confidence 367999999999999954 58999999987632 2235678899999999999999999999988 78999999
Q ss_pred ecCCCChhHhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC----CCCeEEeeccCc
Q 006903 422 YQPNGSLFNLLHGSE--NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN----NMEPCISEYGLI 495 (626)
Q Consensus 422 y~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~----~~~~kl~DFGl~ 495 (626)
|+++ ++.+++.... ....++...+..++.|++.||+||| +.+|+||||||+||+++. ++.+|++|||++
T Consensus 85 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 85 YAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH----SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred CCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH----hCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9975 6777664322 2236889999999999999999999 679999999999999999 999999999997
Q ss_pred cccCCCc------cccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCC
Q 006903 496 VTENHDQ------SFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQN 546 (626)
Q Consensus 496 ~~~~~~~------~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~ 546 (626)
....... ....++..|++||.... ..++.++|||||||++|||++|+.||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~ 217 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFK 217 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCc
Confidence 6532211 12345667899997654 456889999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=294.56 Aligned_cols=240 Identities=18% Similarity=0.305 Sum_probs=194.4
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
...||+|.|+.|..|+ ..++..||||.+.+..... +.+.+|+++|..++|||||+++.+..++..+|+||||+.+|
T Consensus 61 ~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~g 140 (596)
T KOG0586|consen 61 IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGG 140 (596)
T ss_pred eeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCc
Confidence 3679999999999998 4579999999998766432 45889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC--Cccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--DQSF 504 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--~~~~ 504 (626)
.+++|+... ..........+..|+.+|++||| ++.|||||||++||||+.++++||+|||++..... ....
T Consensus 141 e~~~yl~~~---gr~~e~~ar~~F~q~vsaveYcH----~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt 213 (596)
T KOG0586|consen 141 ELFDYLVKH---GRMKEKEARAKFRQIVSAVEYCH----SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQT 213 (596)
T ss_pred hhHHHHHhc---ccchhhhhhhhhHHHHHHHHHHh----hcceeccccchhhcccccccceeeeccccceeecccccccc
Confidence 999999632 33444778889999999999999 67899999999999999999999999999876432 2345
Q ss_pred cccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 505 LAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
.++++.|++||+..+..| ++++|+||+|+++|-|+.|..||++. .+.+.-.+.+...+....+ . ..
T Consensus 214 ~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~-~lk~Lr~rvl~gk~rIp~~--------m----s~ 280 (596)
T KOG0586|consen 214 FCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ-NLKELRPRVLRGKYRIPFY--------M----SC 280 (596)
T ss_pred cCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc-ccccccchheeeeecccce--------e----ec
Confidence 678899999999876654 78999999999999999999999843 3433333333332221110 1 11
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
.+-+++++.+..+|.+|++++++.+.-
T Consensus 281 dce~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 281 DCEDLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred hhHHHHHHhhccCccccCCHHHhhhhc
Confidence 355778899999999999999997743
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=289.74 Aligned_cols=243 Identities=20% Similarity=0.306 Sum_probs=188.6
Q ss_pred ccccccccCCCcceEEEEeCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecC
Q 006903 349 APAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
...+.||+||.+.||++...+.+.+|+|++..... ....|..|+..|.+++ |.+||.+++|-..++.+|+||||-+
T Consensus 364 eilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd 443 (677)
T KOG0596|consen 364 EILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGD 443 (677)
T ss_pred hHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeeccc
Confidence 34578999999999999998889999998865443 3357999999999995 9999999999999999999999875
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc-
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS- 503 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~- 503 (626)
-+|..+|+... .....| .+..+..|++.++.++| ..||||.||||.|.|+-+ |.+||.|||+|.....+.+
T Consensus 444 -~DL~kiL~k~~-~~~~~~-~lk~ywkqML~aV~~IH----~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 444 -IDLNKILKKKK-SIDPDW-FLKFYWKQMLLAVKTIH----QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred -ccHHHHHHhcc-CCCchH-HHHHHHHHHHHHHHHHH----HhceeecCCCcccEEEEe-eeEEeeeechhcccCccccc
Confidence 59999997432 223345 67889999999999999 579999999999999875 6899999999876554432
Q ss_pred ----ccccccccchhhccccCC-----------CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 504 ----FLAQTSSLKINDISNQMC-----------STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 504 ----~~~~~~~~~~pe~~~~~~-----------~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
.-.||..||+||.+..+. .+.++||||+|||||+|+.|++||..-.+....++.+.......++
T Consensus 516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Ief- 594 (677)
T KOG0596|consen 516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEF- 594 (677)
T ss_pred eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccc-
Confidence 246899999999764433 2578999999999999999999997433333333333332211111
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+ ..++ ...++++|..||+.||++||++.|+++
T Consensus 595 -p-----~~~~--~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 595 -P-----DIPE--NDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred -c-----CCCC--chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 1 1111 122889999999999999999999876
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=291.46 Aligned_cols=256 Identities=17% Similarity=0.247 Sum_probs=188.6
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCC-----eEEEEEee
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ-----EKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~-----~~~lv~Ey 422 (626)
.+.||+|+||.||+|. ..+|+.||+|.+.... .....+.+|+.++++++||||+++++++.... ..++||||
T Consensus 10 ~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 89 (336)
T cd07849 10 LSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQEL 89 (336)
T ss_pred EEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehh
Confidence 4789999999999998 4578999999986433 23456888999999999999999999876543 47999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
+++ +|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~-~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH----~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 90 MET-DLYKLIKT----QHLSNDHIQYFLYQILRGLKYIH----SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred ccc-CHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 974 88888753 36899999999999999999999 6799999999999999999999999999976532211
Q ss_pred ------cccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--HHHHhhccccc---ccccH
Q 006903 503 ------SFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW--VHSVVREEWTV---EVFDE 570 (626)
Q Consensus 503 ------~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~---~~~d~ 570 (626)
....++..|++||... ...++.++|||||||++|||+||+.||........+ ........... ...+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (336)
T cd07849 161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL 240 (336)
T ss_pred cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence 1234567799999754 345788999999999999999999998643221111 11111110000 00000
Q ss_pred H-------------HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhhhh
Q 006903 571 V-------------LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNIKE 615 (626)
Q Consensus 571 ~-------------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i~~ 615 (626)
. .......+.....+.+++.+||+.+|++|||+.|+++. ++....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 0 00000001123458899999999999999999999886 665543
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=289.77 Aligned_cols=254 Identities=19% Similarity=0.270 Sum_probs=189.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++++++++||||+++++++... ...++|+
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 99 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVM 99 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEe
Confidence 47899999999999984 579999999987532 2235688999999999999999999988754 2468999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+.. +|..+.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|++|||+++....
T Consensus 100 e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH----~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~ 169 (342)
T cd07879 100 PYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIH----SAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA 169 (342)
T ss_pred ccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence 99974 7777652 35889999999999999999999 67999999999999999999999999999876544
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-ccc-cc---cc----H
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-WTV-EV---FD----E 570 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-~~~-~~---~d----~ 570 (626)
......++..|++||.... ..++.++|||||||++|||++|+.||........ +....... ... .. .+ .
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (342)
T cd07879 170 EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKVTGVPGPEFVQKLEDKAAK 248 (342)
T ss_pred CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHHhcccchH
Confidence 3334455677999998654 4578899999999999999999999975432222 22111100 000 00 00 0
Q ss_pred HH-------Hhh---hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhhhh
Q 006903 571 VL-------IAE---AASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNIKE 615 (626)
Q Consensus 571 ~~-------~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i~~ 615 (626)
.. ... ...+.....+.+++.+||+.||++||+++|++.. ++.++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 249 SYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 00 000 0001123357899999999999999999999854 666654
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=280.44 Aligned_cols=252 Identities=19% Similarity=0.320 Sum_probs=188.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|... +++.||||++..... ......+|+..+++++ ||||+++++++..++..++||||+ +|
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 82 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EG 82 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CC
Confidence 367999999999999965 588999999876443 2234567999999999 999999999999999999999999 88
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--SF 504 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~~ 504 (626)
+|.+++.... ...+++..+..++.|++.+|.||| +++|+|+||||+||++++++.++|+|||++....... ..
T Consensus 83 ~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh----~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (283)
T cd07830 83 NLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIH----KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTD 157 (283)
T ss_pred CHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCC
Confidence 9999886432 347899999999999999999999 6799999999999999999999999999986543321 22
Q ss_pred cccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH--HHhhcc----cc-----cccccHHH
Q 006903 505 LAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH--SVVREE----WT-----VEVFDEVL 572 (626)
Q Consensus 505 ~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~--~~~~~~----~~-----~~~~d~~~ 572 (626)
..++..|++||... ...++.++||||||+++|||++|+.||........... ...... +. ....+...
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07830 158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRF 237 (283)
T ss_pred CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccc
Confidence 34567789999764 34568899999999999999999988864322111110 000000 00 00000000
Q ss_pred Hh------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 IA------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. ....+.....+.+++.+||+.+|++|||++|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 238 PQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00 0000111356889999999999999999999875
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=289.33 Aligned_cols=250 Identities=17% Similarity=0.197 Sum_probs=187.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCH---------------HHHHHHHHHhccCCCCCccccceEEEeCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS---------------EDFKNRMQKIDHVKHPNVLPPLAYYCSKQ 414 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~---------------~~~~~ei~~l~~l~H~nIv~l~g~~~~~~ 414 (626)
.+.||+|+||.||+|.. .+++.||||.++...... ..+.+|+++++.++||||+++++++..++
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 36799999999999984 468999999986543211 24778999999999999999999999999
Q ss_pred eEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccC
Q 006903 415 EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL 494 (626)
Q Consensus 415 ~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 494 (626)
..++||||+. |+|.+++.. ...+++.....++.|++.||.||| +.+|+||||||+||+++.++.++++|||+
T Consensus 94 ~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH----~~~i~H~dl~~~nill~~~~~~kl~dfg~ 165 (335)
T PTZ00024 94 FINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLH----KWYFMHRDLSPANIFINSKGICKIADFGL 165 (335)
T ss_pred cEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeecccccHHHeEECCCCCEEECCccc
Confidence 9999999997 699999853 346889999999999999999999 67999999999999999999999999998
Q ss_pred ccccCC-----------------Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH
Q 006903 495 IVTENH-----------------DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH 556 (626)
Q Consensus 495 ~~~~~~-----------------~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~ 556 (626)
+..... ......++..|++||.... ..++.++|||||||++|||+||+.||....+.... .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~-~ 244 (335)
T PTZ00024 166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL-G 244 (335)
T ss_pred eeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-H
Confidence 754330 0011224567899997654 34688999999999999999999998754432221 1
Q ss_pred HHhh---cc----ccccc-------ccHHHH--hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 557 SVVR---EE----WTVEV-------FDEVLI--AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 557 ~~~~---~~----~~~~~-------~d~~~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+.. .. +.... ...... ...........+.+++.+||+.+|++||+++|++..
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 245 RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 1111 00 00000 000000 000011223458899999999999999999999863
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=283.10 Aligned_cols=240 Identities=19% Similarity=0.269 Sum_probs=188.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+++.||+|.+..... ..+.+.+|+++++.++|||++++++++.+.+..|+||||+.
T Consensus 26 ~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 104 (313)
T cd06633 26 LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL- 104 (313)
T ss_pred ceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-
Confidence 35699999999999985 4689999999865432 12467889999999999999999999999999999999996
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|++.+++.. ....+++..+..++.|++.|+.||| +.+|+||||||+||++++++.+||+|||++...... ...
T Consensus 105 ~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH----~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~-~~~ 177 (313)
T cd06633 105 GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLH----SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA-NSF 177 (313)
T ss_pred CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCChhhEEECCCCCEEEeecCCCcccCCC-CCc
Confidence 578887753 2346899999999999999999999 679999999999999999999999999997643322 233
Q ss_pred ccccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 506 AQTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 506 ~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
.++..|++||... ...++.++|||||||++|||++|+.|+....... ............ . ......
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~~-~---------~~~~~~ 246 (313)
T cd06633 178 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNDSPT-L---------QSNEWT 246 (313)
T ss_pred cccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCCC-C---------CccccC
Confidence 4667799999863 3456889999999999999999999987543322 222222211110 0 011122
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+.+++.+||+.+|.+||++.+++..
T Consensus 247 ~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 247 DSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 347789999999999999999999863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=283.94 Aligned_cols=241 Identities=18% Similarity=0.231 Sum_probs=187.9
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||+|+||.||+|+. .++..+|+|.+..... ..+++.+|+++++.++|+|++++.+++...+..++||||+. |
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 99 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-G 99 (308)
T ss_pred HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-C
Confidence 6799999999999995 4688999999864321 22467889999999999999999999999999999999997 6
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLA 506 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~ 506 (626)
++.+++... ...+++..+..++.+++.|+.||| +.+++||||||+||+++.++.++++|||++....... ...
T Consensus 100 ~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-~~~ 172 (308)
T cd06634 100 SASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN-XFV 172 (308)
T ss_pred CHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHhEEECCCCcEEECCcccceeecCcc-ccc
Confidence 888877532 346889999999999999999999 6799999999999999999999999999976543322 234
Q ss_pred cccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 507 QTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 507 ~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
++..|++||... ...++.++|||||||++|||++|+.|+..... .+........... . ........
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~~-~---------~~~~~~~~ 241 (308)
T cd06634 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESP-A---------LQSGHWSE 241 (308)
T ss_pred CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH-HHHHHHHhhcCCC-C---------cCcccccH
Confidence 567799999863 34567899999999999999999999864322 1222222111110 0 00112334
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
.+.+++.+||+.+|++||++.++++.-.
T Consensus 242 ~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 242 YFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred HHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 5788999999999999999999987644
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=283.28 Aligned_cols=250 Identities=20% Similarity=0.217 Sum_probs=185.4
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCC----------eE
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ----------EK 416 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~----------~~ 416 (626)
.+.||+|+||.||+|... +|+.||+|+++... .....+.+|++++++++||||+++++++.+.. ..
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 91 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAF 91 (302)
T ss_pred eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcE
Confidence 378999999999999964 68999999987543 23356788999999999999999999887654 78
Q ss_pred EEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 417 LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 417 ~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
++|+||+++ ++.+++.. ....+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||++.
T Consensus 92 ~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH----~~~i~H~dl~p~nili~~~~~~kl~dfg~~~ 164 (302)
T cd07864 92 YLVFEYMDH-DLMGLLES--GLVHFSEDHIKSFMKQLLEGLNYCH----KKNFLHRDIKCSNILLNNKGQIKLADFGLAR 164 (302)
T ss_pred EEEEcccCc-cHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCcEEeCcccccc
Confidence 999999986 77777753 2346899999999999999999999 6799999999999999999999999999986
Q ss_pred ccCCCc----cccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh---cccc---c
Q 006903 497 TENHDQ----SFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR---EEWT---V 565 (626)
Q Consensus 497 ~~~~~~----~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~---~ 565 (626)
...... .....+..|++||.... ...+.++|||||||++|||++|+.||....... .+..+.. .... .
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 243 (302)
T cd07864 165 LYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA-QLELISRLCGSPCPAVWP 243 (302)
T ss_pred cccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhhcc
Confidence 532211 11234567899997643 346889999999999999999999987543222 1111111 0000 0
Q ss_pred cc--------ccHHHH----hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 566 EV--------FDEVLI----AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 566 ~~--------~d~~~~----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. .+.... ...........+.+++.+||+.+|++||++.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 244 DVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred cccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 000000 00000112346889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=289.54 Aligned_cols=254 Identities=19% Similarity=0.250 Sum_probs=190.4
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCC------eEEEEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ------EKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~------~~~lv~ 420 (626)
.+.||+|+||.||++. ..++..||||++..... ..+.+.+|++++++++||||+++++++.... ..++||
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 99 (343)
T cd07880 20 LKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVM 99 (343)
T ss_pred EEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEE
Confidence 3679999999999998 55799999999864322 2356889999999999999999999887543 358999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+ +++|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|++|||++.....
T Consensus 100 e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH----~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 170 (343)
T cd07880 100 PFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIH----AAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred ecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence 999 6799888852 36899999999999999999999 67999999999999999999999999999876544
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-cccccccHHHH-----
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-WTVEVFDEVLI----- 573 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~----- 573 (626)
......++..|++||.... ..++.++|||||||++||+++|+.||........ ........ .....+...+.
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07880 171 EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ-LMEIMKVTGTPSKEFVQKLQSEDAK 249 (343)
T ss_pred CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHhhcchhHH
Confidence 4444456778899997654 3578899999999999999999999875433222 21111110 00000000000
Q ss_pred ---h----------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 574 ---A----------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 574 ---~----------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
. ....+.....+.+++.+|++.||++|||+.+++. .++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~ 305 (343)
T cd07880 250 NYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH 305 (343)
T ss_pred HHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence 0 0001122335789999999999999999999983 455443
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=276.95 Aligned_cols=230 Identities=17% Similarity=0.223 Sum_probs=179.0
Q ss_pred cccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhcc-CCCCCccccceEEEeCCeEEEEEeecCCCChhHh
Q 006903 354 LGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDH-VKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNL 431 (626)
Q Consensus 354 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~-l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~ 431 (626)
||+|+||.||++.. .++..+|+|.+........ |+..... .+||||+++++++...+..++||||+++|+|.++
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~ 99 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDL 99 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHH
Confidence 79999999999984 5688999999875432221 1211111 2699999999999999999999999999999999
Q ss_pred hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCccccCCCccccccccc
Q 006903 432 LHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTENHDQSFLAQTSS 510 (626)
Q Consensus 432 l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~~~~~~~~~~~~~ 510 (626)
+... ..+++..+..++.|+++||.||| +.+|+||||||+||+++.++ .++|+|||++....... ...++..
T Consensus 100 l~~~---~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~ 171 (267)
T PHA03390 100 LKKE---GKLSEAEVKKIIRQLVEALNDLH----KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS-CYDGTLD 171 (267)
T ss_pred HHhc---CCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc-cCCCCCc
Confidence 9642 37899999999999999999999 67899999999999999998 99999999986544332 2346778
Q ss_pred cchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc----hhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 511 LKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN----LATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 511 ~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
|++||......++.++|||||||++|||++|+.||..... ...+.... .. .. .........+.
T Consensus 172 y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~--~~----------~~~~~~~~~~~ 238 (267)
T PHA03390 172 YFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QK--KL----------PFIKNVSKNAN 238 (267)
T ss_pred ccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cc--cC----------CcccccCHHHH
Confidence 9999998887889999999999999999999999863321 11111111 00 00 01112334588
Q ss_pred HHHhhccCCCCCCCCC-HHHHHH
Q 006903 587 QVALRCINQSPNERPS-MNQVAV 608 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs-~~ev~~ 608 (626)
+++.+||+.+|.+||+ ++|+++
T Consensus 239 ~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 239 DFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHHhccChhhCCchHHHHhc
Confidence 8999999999999996 688874
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=288.83 Aligned_cols=257 Identities=17% Similarity=0.210 Sum_probs=190.8
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeC-----CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK-----QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lv~E 421 (626)
.+.||+|+||.||+|+ ..+++.||||.+.... .....+.+|+.+++.++||||+++++++... ...++|||
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 89 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYE 89 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEe
Confidence 3689999999999998 4578999999987532 2345677899999999999999999987654 24799999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+. ++|.+++.. ...+++.....++.|++.||.||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 90 ~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH----~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 90 LMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIH----SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred CCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 996 689988853 346899999999999999999999 679999999999999999999999999998654322
Q ss_pred ---ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHh---hccc---ccccccHH
Q 006903 502 ---QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVV---REEW---TVEVFDEV 571 (626)
Q Consensus 502 ---~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~---~~~~---~~~~~d~~ 571 (626)
.....++..|++||.... ..++.++|||||||++|||++|+.||..... ........ .... .....+..
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY-VHQLKLITELLGSPSEEDLGFIRNEK 240 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHHHHHhCCCChHHhhhcCchh
Confidence 122345677999997653 4578899999999999999999999864321 11111100 0000 00000000
Q ss_pred HH-------------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhhhhc
Q 006903 572 LI-------------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNIKEE 616 (626)
Q Consensus 572 ~~-------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i~~~ 616 (626)
.. .....+.....+.+++.+||+.+|++|||++|+++. ++.+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 241 ARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred hhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 00 000111234568899999999999999999999886 6666544
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=283.10 Aligned_cols=251 Identities=17% Similarity=0.210 Sum_probs=182.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCC--------eEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ--------EKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~--------~~~l 418 (626)
.+.||+|+||.||+|.. .+++.||||.+..... ....+.+|++++++++||||+++++++.... ..++
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 96 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYL 96 (310)
T ss_pred EEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEE
Confidence 36799999999999985 4689999998864332 2345678999999999999999999887654 3599
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+.+ +|.+++.. ....+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||++...
T Consensus 97 v~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 169 (310)
T cd07865 97 VFEFCEH-DLAGLLSN--KNVKFTLSEIKKVMKMLLNGLYYIH----RNKILHRDMKAANILITKDGILKLADFGLARAF 169 (310)
T ss_pred EEcCCCc-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence 9999974 88888853 2246899999999999999999999 679999999999999999999999999998643
Q ss_pred CCCc-------cccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--HHHHhhc---cccc
Q 006903 499 NHDQ-------SFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATW--VHSVVRE---EWTV 565 (626)
Q Consensus 499 ~~~~-------~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~--~~~~~~~---~~~~ 565 (626)
.... ....++..|++||..... .++.++||||||+++|||+||+.|+......... +...... ....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (310)
T cd07865 170 SLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWP 249 (310)
T ss_pred cCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence 2211 112345678999976443 4678999999999999999999988644322111 1111100 0000
Q ss_pred -----ccccH---------HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 566 -----EVFDE---------VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 566 -----~~~d~---------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+..+. ..............+.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 250 GVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred cccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00000 00000000001235678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=273.61 Aligned_cols=242 Identities=22% Similarity=0.287 Sum_probs=193.9
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||++. ..+++.+|+|.+..... ...++.+|++++++++|+||+++.+++......++||||++++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFG 84 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCC
Confidence 3679999999999997 45789999999875432 2346788999999999999999999999999999999999999
Q ss_pred ChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-ccc
Q 006903 427 SLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-QSF 504 (626)
Q Consensus 427 ~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-~~~ 504 (626)
+|.+++.... ....+++..+..++.+++.||+||| +.+++||||+|+||++++++.+|++|||++...... ...
T Consensus 85 ~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh----~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 85 DLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH----EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred CHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence 9999986422 2356899999999999999999999 689999999999999999999999999998654322 122
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++|+||||+++|||++|+.||... +..+......... .. .........
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~-~~~~~~~~~~~~~-~~----------~~~~~~~~~ 228 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEAR-SMQDLRYKVQRGK-YP----------PIPPIYSQD 228 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhcCC-CC----------CCchhhCHH
Confidence 34566789999987777888999999999999999999998643 2222222221111 10 111233455
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.+++.+|++.+|++||++.|+++
T Consensus 229 ~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 229 LQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHHHHHHHcCCCcccCCCHHHHhc
Confidence 889999999999999999999975
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=285.92 Aligned_cols=253 Identities=19% Similarity=0.271 Sum_probs=186.9
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC---CCHHHHHHHHHHhccC-CCCCccccceEEEeC--CeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS---ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSK--QEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~--~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|... +++.+|+|++.... .....+.+|+.+++++ +||||+++++++... ...++||||+
T Consensus 12 ~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~ 91 (337)
T cd07852 12 LQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYM 91 (337)
T ss_pred hHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccc
Confidence 378999999999999954 68899999886432 2234577899999999 999999999988654 3679999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
+ ++|..++.. ..++|..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH----~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~ 162 (337)
T cd07852 92 E-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIH----SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE 162 (337)
T ss_pred c-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence 7 599998853 26889999999999999999999 6799999999999999999999999999976432211
Q ss_pred -------cccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-cccc--------
Q 006903 503 -------SFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-EWTV-------- 565 (626)
Q Consensus 503 -------~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-~~~~-------- 565 (626)
....++..|++||... ....+.++|||||||++|||+||+.||........ ....... ....
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07852 163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIGPPSAEDIESIK 241 (337)
T ss_pred cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHHH
Confidence 1234567799999754 34568899999999999999999999864332221 1111110 0000
Q ss_pred -----ccccHHH-----HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhh
Q 006903 566 -----EVFDEVL-----IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNI 613 (626)
Q Consensus 566 -----~~~d~~~-----~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i 613 (626)
...+... ......+.....+.+++.+||+.+|++|||+.++++. ++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 0000000 0000001124468899999999999999999999874 4444
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=277.71 Aligned_cols=251 Identities=18% Similarity=0.226 Sum_probs=187.7
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC---CHHHHHHHHHHhccC---CCCCccccceEEEeCCe-----EEE
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI---SSEDFKNRMQKIDHV---KHPNVLPPLAYYCSKQE-----KLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l---~H~nIv~l~g~~~~~~~-----~~l 418 (626)
.+.||+|+||.||+|+.. +++.||+|+++.... ....+.+|+.+++++ +||||+++++++...+. .++
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 83 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL 83 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence 367999999999999965 489999999974332 124566777766555 69999999999988776 899
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
+|||+.+ +|.+++.... ...+++..+..++.+++.||.||| +.+++|+||||+||++++++.+||+|||++...
T Consensus 84 ~~e~~~~-~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH----~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 84 VFEHVDQ-DLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLH----SHRIVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred Eehhccc-CHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCChhhEEEccCCCEEEeccCcceec
Confidence 9999974 8998886422 236899999999999999999999 679999999999999999999999999998654
Q ss_pred CCCc--cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-------ccccc--
Q 006903 499 NHDQ--SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-------WTVEV-- 567 (626)
Q Consensus 499 ~~~~--~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-------~~~~~-- 567 (626)
.... ....++..|.+||......++.++|||||||++|||+||+.||.... ..+....+.... +....
T Consensus 158 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07838 158 SFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS-EADQLDKIFDVIGLPSEEEWPRNVSL 236 (287)
T ss_pred cCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC-hHHHHHHHHHHcCCCChHhcCCCccc
Confidence 3221 22335667899998887788999999999999999999988886432 223333222110 00000
Q ss_pred ----ccHHHH--hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 568 ----FDEVLI--AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 568 ----~d~~~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+..... .....++....+.+++.+||+.||++||++.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred chhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000000 00111223456789999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-33 Score=305.35 Aligned_cols=254 Identities=14% Similarity=0.175 Sum_probs=176.2
Q ss_pred ccccccCCCcceEEEEeCC--CcEEEEE------------------EcCCCCCCHHHHHHHHHHhccCCCCCccccceEE
Q 006903 351 AELLGRGKHGSLYRVVLDD--GLMLAVK------------------RLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY 410 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~--g~~vAvK------------------~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~ 410 (626)
.+.||+|+||+||++..+. +..+++| .+.........+.+|++++++++|||||++++++
T Consensus 153 i~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 232 (501)
T PHA03210 153 IDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIEEIL 232 (501)
T ss_pred EeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEeEEE
Confidence 4789999999999987432 2222222 1111112234678999999999999999999999
Q ss_pred EeCCeEEEEEeecCCCChhHhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeE
Q 006903 411 CSKQEKLLVYEYQPNGSLFNLLHGSEN--GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPC 488 (626)
Q Consensus 411 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~k 488 (626)
...+..|+|+|++. ++|.+++..... ...........++.|++.||.||| +++||||||||+|||++.++.+|
T Consensus 233 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH----~~gIiHrDLKP~NILl~~~~~vk 307 (501)
T PHA03210 233 RSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH----DKKLIHRDIKLENIFLNCDGKIV 307 (501)
T ss_pred EECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEE
Confidence 99999999999985 578777753211 122335567789999999999999 67999999999999999999999
Q ss_pred EeeccCccccCCCc----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCC-CCc-chhHHHHHHhhc-
Q 006903 489 ISEYGLIVTENHDQ----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQN-NGF-NLATWVHSVVRE- 561 (626)
Q Consensus 489 l~DFGl~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~-~~~-~~~~~~~~~~~~- 561 (626)
|+|||+++...... ....++..|++||......++.++|||||||++|||++|+.++. ... .....+......
T Consensus 308 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~ 387 (501)
T PHA03210 308 LGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSL 387 (501)
T ss_pred EEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhc
Confidence 99999986543221 22457888999999888888999999999999999999986543 211 111111111110
Q ss_pred cc-ccccccHH------HHh---h---hccH------HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 562 EW-TVEVFDEV------LIA---E---AASE------ERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 562 ~~-~~~~~d~~------~~~---~---~~~~------~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.. ..+..+.. +.. . .... .....+.+++.+|++.||++|||+.|++..
T Consensus 388 ~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 388 SVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred ccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00 00000000 000 0 0000 012246677889999999999999999863
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=272.41 Aligned_cols=242 Identities=21% Similarity=0.331 Sum_probs=195.6
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||++... ++..||+|++..... ..+.+.+|+++++.++|||++++.+.+...+..++|+||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~ 84 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGG 84 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCC
Confidence 367999999999999954 689999999976543 3456889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 427 SLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 427 ~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
+|.+++.... ....+++..+..++.+++.||.||| +.+++|+||+|+||++++++.++|+|||++.......
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh----~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 85 DLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH----SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred cHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH----hCCEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 9999997432 2367999999999999999999999 6799999999999999999999999999986543322
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++||||+|+++|+|++|+.|+.... ..+........... . .+....
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-~~~~~~~~~~~~~~-~----------~~~~~~ 228 (258)
T cd08215 161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-LLELALKILKGQYP-P----------IPSQYS 228 (258)
T ss_pred cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-HHHHHHHHhcCCCC-C----------CCCCCC
Confidence 22345677999998877778899999999999999999999986432 33333332222110 0 111223
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||..+|++|||+.|+++
T Consensus 229 ~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 229 SELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 45788999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=286.43 Aligned_cols=257 Identities=18% Similarity=0.231 Sum_probs=195.8
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCC-----eEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ-----EKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~-----~~~lv~E 421 (626)
.+.||+|+||.||+|... +++.||||++.... ...+.+.+|+.+++.++||||+++++++...+ ..+++||
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e 84 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTE 84 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEec
Confidence 468999999999999954 58999999987643 23467899999999999999999999988765 7899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|++ ++|.+++.. ...+++..+..++.+++.||.||| +.||+||||||+||+++.++.++|+|||++......
T Consensus 85 ~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH----~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 85 LME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLH----SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred chh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 998 489998853 237999999999999999999999 679999999999999999999999999998654332
Q ss_pred ------ccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc--ccccc----
Q 006903 502 ------QSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW--TVEVF---- 568 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~---- 568 (626)
.....++..|++||..... .++.++||||||+++|||++|+.||..... .+....+..... ..+..
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~ 235 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY-IDQLNLIVEVLGTPSEEDLKFIT 235 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH-HHHHHHHHHhcCCCChhHhhhcc
Confidence 1223456779999988766 778999999999999999999999864332 222222211100 00000
Q ss_pred ----cHHHH---------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhhhhc
Q 006903 569 ----DEVLI---------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNIKEE 616 (626)
Q Consensus 569 ----d~~~~---------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i~~~ 616 (626)
..... .....+.....+.+++.+||+.+|++||++++++.. ++.++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 236 SEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred ccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 00000 000011123467899999999999999999999984 7766654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=280.60 Aligned_cols=244 Identities=19% Similarity=0.252 Sum_probs=189.8
Q ss_pred ccccccCCCcceEEEEe----CCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||.||+++. .+++.||||.++... ...+.+.+|++++.++ +||||+++++.+......++||
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 84 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLIL 84 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEE
Confidence 47899999999999873 357899999987532 2235688999999999 5999999999999999999999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++|+|.+++.. ...+++.....++.|+++||.||| ..+++||||||+||+++.++.++++|||+++....
T Consensus 85 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH----~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 85 DYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLH----QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred ecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 99999999999853 246889999999999999999999 67999999999999999999999999999765322
Q ss_pred Cc----cccccccccchhhccccCC--CCCcchhHHHHHHHHHHHcCCCCCCCCcch---hHHHHHHhhcccccccccHH
Q 006903 501 DQ----SFLAQTSSLKINDISNQMC--STIKADVYGFGVILLELLTGKLVQNNGFNL---ATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 501 ~~----~~~~~~~~~~~pe~~~~~~--~~~k~DVwSfGvvl~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~~d~~ 571 (626)
.. ....++..|++||...... .+.++||||||+++|||+||+.||...... .+..+.......
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------- 229 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKP-------- 229 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCC--------
Confidence 21 1234567889999875543 678999999999999999999998532211 111111111110
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
..+......+.+++.+||+.+|++|||+.++.+.|+..
T Consensus 230 ----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 230 ----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 01111223577889999999999999998887777653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=275.03 Aligned_cols=239 Identities=18% Similarity=0.207 Sum_probs=186.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC------CCHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS------ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~------~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .++..||+|.+.... .....+.+|++++++++||||+++++++.+. ...+++||
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVE 86 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEE
Confidence 47899999999999984 568999999875321 1124688999999999999999999988764 45789999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH- 500 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~- 500 (626)
|+++++|.+++.. ...+++.....++.+++.||.||| +.+|+||||||+||+++.++.++|+|||+++....
T Consensus 87 ~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH----~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 87 YMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLH----SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred eCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 9999999999863 235788999999999999999999 67999999999999999999999999999864321
Q ss_pred -----CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 501 -----DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 501 -----~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
......++..|++||.......+.++|||||||++|||++|+.||......... ..........
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~---------- 228 (264)
T cd06653 160 CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAI-FKIATQPTKP---------- 228 (264)
T ss_pred cccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHH-HHHHcCCCCC----------
Confidence 111234667799999887777889999999999999999999999754332222 2222111110
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+......+.+++.+||+ +|.+||+..+++.
T Consensus 229 ~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 229 MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 1112233457888999999 5799999998765
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=272.43 Aligned_cols=247 Identities=18% Similarity=0.272 Sum_probs=191.2
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCC--CHHHHHHHHHH-hccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI--SSEDFKNRMQK-IDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~~~ei~~-l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
..||.|+||+|+|-. .+.|+..|||+++.... .++++..|.+. ++.-+.||||+++|.+..++..|+.||.|.- +
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-S 148 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-S 148 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-h
Confidence 689999999999987 56799999999987653 45678888876 4555789999999999999999999999954 6
Q ss_pred hhHhhcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC--Ccc
Q 006903 428 LFNLLHG--SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--DQS 503 (626)
Q Consensus 428 L~~~l~~--~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--~~~ 503 (626)
|..+... ......+++...-.|......||.||.+. ..|||||+||+|||+|..|.+|+||||++..... ..+
T Consensus 149 lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~---lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT 225 (361)
T KOG1006|consen 149 LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE---LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKT 225 (361)
T ss_pred HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH---hhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhh
Confidence 6554421 11234577777778888899999999975 4799999999999999999999999999754222 223
Q ss_pred ccccccccchhhccccC--CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 504 FLAQTSSLKINDISNQM--CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~--~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.-+|-..|+|||.+... .|+.+|||||+|++|||+.||+.|+..-.+..+.+..+...+...-..+. ..-+.
T Consensus 226 ~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~------~~~~~ 299 (361)
T KOG1006|consen 226 VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDK------ECVHY 299 (361)
T ss_pred hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcc------ccccc
Confidence 34577789999976432 47889999999999999999999998666666666666555433222221 11123
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+..++..|+.+|-++||...++.+
T Consensus 300 s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 300 SFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CHHHHHHHHHHhhcccccCcchhhhhc
Confidence 446888999999999999999998865
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=272.88 Aligned_cols=232 Identities=22% Similarity=0.286 Sum_probs=188.4
Q ss_pred cccCCCcceEEEEeC-CCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 354 LGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 354 lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
||+|+||.||++... +++.+|+|.+..... ....+..|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999854 589999999876542 234788999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++.. ...+++.....++.|++.||.|+| +.+++|+||||+||+++.++.++++|||++...... ....
T Consensus 81 ~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh----~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (250)
T cd05123 81 FSHLSK---EGRFSEERARFYAAEIVLALEYLH----SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTF 153 (250)
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCC
Confidence 999963 236899999999999999999999 679999999999999999999999999997654332 2334
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||.......+.++|+||||+++||+++|+.||..... .+........... .+......+
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-~~~~~~~~~~~~~------------~~~~~~~~l 220 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-KEIYEKILKDPLR------------FPEFLSPEA 220 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHhcCCCC------------CCCCCCHHH
Confidence 566778999988777788899999999999999999999864332 3333333221110 111113457
Q ss_pred HHHHhhccCCCCCCCCCHHH
Q 006903 586 LQVALRCINQSPNERPSMNQ 605 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~e 605 (626)
.+++.+||..||++||++.+
T Consensus 221 ~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 221 RDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHhcCCHhhCCCccc
Confidence 88999999999999999954
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=277.05 Aligned_cols=249 Identities=19% Similarity=0.240 Sum_probs=189.5
Q ss_pred cccccCCCcceEEEEeC-CCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
+.||+|+||.||+|... +++.||+|.+.... ...+.+..|++++++++|+||+++++++...+..++||||++ ++
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~ 83 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MD 83 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cC
Confidence 67999999999999954 59999999987643 234678899999999999999999999999999999999998 59
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---SF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~~ 504 (626)
|.+++... ...+++..+..++.+++.||.||| +.+|+||||+|+||++++++.+||+|||++....... ..
T Consensus 84 l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 84 LKKYLDKR--PGPLSPNLIKSIMYQLLRGLAYCH----SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred HHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence 99999642 146899999999999999999999 6799999999999999999999999999986543322 11
Q ss_pred cccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc-cc--------cc--ccHHH
Q 006903 505 LAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW-TV--------EV--FDEVL 572 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~--------~~--~d~~~ 572 (626)
...+..|++||..... .++.++|||||||++|||++|+.||...... +....+..... .. .. .+...
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQILGTPTEESWPGVTKLPDYKPTF 236 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCcHHHHHhhcccccccccc
Confidence 2335568999987555 6788999999999999999999888654322 21111111000 00 00 00000
Q ss_pred Hh------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 IA------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. ....+.....+.+++.+||+.+|++||++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 237 PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00 0000112346899999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=285.38 Aligned_cols=249 Identities=20% Similarity=0.249 Sum_probs=186.1
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||.||+|. ..+++.||+|++..... ..+.+.+|++++++++||||+++++++... ...++++
T Consensus 22 ~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 101 (345)
T cd07877 22 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 101 (345)
T ss_pred EEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEe
Confidence 3679999999999998 45789999999875432 245688899999999999999999987643 3467888
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
|++ +++|.+++.. ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||++.....
T Consensus 102 ~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~ 172 (345)
T cd07877 102 HLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 172 (345)
T ss_pred hhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChHHEEEcCCCCEEEecccccccccc
Confidence 887 7899988852 35899999999999999999999 67999999999999999999999999999876544
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc-c-ccc----ccH---
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW-T-VEV----FDE--- 570 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~-~~~----~d~--- 570 (626)
......++..|++||.... ..++.++|||||||++|||++|+.||...... .....+..... . ... .+.
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (345)
T cd07877 173 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKKISSESAR 251 (345)
T ss_pred cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHhhcccHhHH
Confidence 4444456778999997654 45788999999999999999999998643322 11111111000 0 000 000
Q ss_pred HHHh--hh--------ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 571 VLIA--EA--------ASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 571 ~~~~--~~--------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.... +. ........+.+++.+|++.||++||++.+++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 252 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0000 00 000113457899999999999999999998763
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-32 Score=282.89 Aligned_cols=250 Identities=17% Similarity=0.249 Sum_probs=186.8
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEe-CCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCS-KQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++. ..+++.||+|++.... ...+.+.+|++++++++||||+++.+++.. ....+++|||+ +
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~ 93 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-G 93 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-c
Confidence 4789999999999998 4579999999886432 234678899999999999999999998876 45789999998 5
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
++|.++++. ..+++.....++.|++.||.||| +.+|+||||||+||++++++.++++|||++..........
T Consensus 94 ~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH----~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 165 (328)
T cd07856 94 TDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVH----SAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGY 165 (328)
T ss_pred cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCC
Confidence 689988852 35788888899999999999999 6799999999999999999999999999987544333334
Q ss_pred ccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHH--HHHhhc---ccccccccHH-------H
Q 006903 506 AQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWV--HSVVRE---EWTVEVFDEV-------L 572 (626)
Q Consensus 506 ~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~--~~~~~~---~~~~~~~d~~-------~ 572 (626)
.++..|++||.... ..++.++|||||||++|||+||+.||........+. ...... +......+.. .
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (328)
T cd07856 166 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSL 245 (328)
T ss_pred cccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhc
Confidence 45677899997644 467889999999999999999999986433211110 000000 0000000000 0
Q ss_pred ------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 573 ------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 573 ------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
......+.....+.+++.+||+.+|++||++.+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 246 PKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred cccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000001123568899999999999999999999765
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=288.54 Aligned_cols=248 Identities=19% Similarity=0.252 Sum_probs=188.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCe------EEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE------KLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~------~~lv~ 420 (626)
...||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++++++||||+++++++...+. .++|+
T Consensus 20 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 99 (343)
T cd07851 20 LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVT 99 (343)
T ss_pred EEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEE
Confidence 36899999999999995 468899999986532 223567789999999999999999998776554 89999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+ +++|.+++.. ..+++..+..++.|++.||+||| +.||+||||||+||++++++.+||+|||++.....
T Consensus 100 e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH----~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~ 170 (343)
T cd07851 100 HLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIH----SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD 170 (343)
T ss_pred ecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCCEEEccccccccccc
Confidence 998 5699999853 46899999999999999999999 67999999999999999999999999999876544
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc-ccccccHHHHh----
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW-TVEVFDEVLIA---- 574 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~---- 574 (626)
......++..|++||.... ..++.++|||||||++|||+||+.||...... ..+..+..... ..+.+......
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07851 171 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIMNLVGTPDEELLQKISSESAR 249 (343)
T ss_pred cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCCCCHHHHhhccchhHH
Confidence 4344456777999997643 35688999999999999999999998754332 22222211100 00000000000
Q ss_pred --------------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 575 --------------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 575 --------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..........+.+++.+||+.+|++|||+.||++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 250 NYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000012456889999999999999999999976
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=278.41 Aligned_cols=239 Identities=21% Similarity=0.300 Sum_probs=185.7
Q ss_pred ccccccCCCcceEEEEe----CCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||.||++.. .+|..||+|.++... ...+.+.+|++++.++ +|+||+++++++..+...++||
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLIL 84 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEE
Confidence 36799999999999984 478999999987532 2235688999999999 5999999999999888999999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++++|.+++.. ...+++.....++.|++.||.||| +.+++||||||+|||++.++.+||+|||++.....
T Consensus 85 e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 85 DYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLH----KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 99999999999963 246888899999999999999999 67999999999999999999999999999865322
Q ss_pred Cc----cccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCc---chhHHHHHHhhcccccccccHH
Q 006903 501 DQ----SFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGF---NLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 501 ~~----~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
.. ....++..|++||.... ..++.++||||||+++|||+||+.|+.... ...++.........
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~-------- 229 (290)
T cd05613 158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP-------- 229 (290)
T ss_pred ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC--------
Confidence 11 12345677899998754 245789999999999999999999986321 11222222211110
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
..+......+.+++.+||+.||++|| ++++++.
T Consensus 230 ----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 230 ----PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ----CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 01112234577899999999999997 6677655
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=307.08 Aligned_cols=245 Identities=20% Similarity=0.316 Sum_probs=184.3
Q ss_pred chhhhhcccccccccCCCcceEEEE-eCCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeC-----
Q 006903 342 KFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK----- 413 (626)
Q Consensus 342 ~~~~l~~~~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~----- 413 (626)
.||++ ++||+||||.|||++ .-||+.||||++.-.. ..-..+.+|+..+++|+|||||+++..+...
T Consensus 480 DFEEL-----~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 480 DFEEL-----ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHHH-----HHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 45666 789999999999999 4489999999997654 2234688999999999999999986532100
Q ss_pred --------------------------------------------------------------------------------
Q 006903 414 -------------------------------------------------------------------------------- 413 (626)
Q Consensus 414 -------------------------------------------------------------------------------- 413 (626)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 006903 414 ----------------------------------QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALAL 459 (626)
Q Consensus 414 ----------------------------------~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~y 459 (626)
..+||-||||+.-.++++++...... .-...+++..+|+.||+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence 01467889998877777776422111 345677899999999999
Q ss_pred HHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---------------------CCccccccccccchhhccc
Q 006903 460 IHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---------------------HDQSFLAQTSSLKINDISN 518 (626)
Q Consensus 460 lH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---------------------~~~~~~~~~~~~~~pe~~~ 518 (626)
+| +.|||||||||.||++|++..+||+|||++.... .+.+...||..|+|||+..
T Consensus 713 IH----~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 713 IH----DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HH----hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 99 7899999999999999999999999999986410 0123456788999999876
Q ss_pred cCC---CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCC
Q 006903 519 QMC---STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQ 595 (626)
Q Consensus 519 ~~~---~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~ 595 (626)
... |+.|+|+||+|||++||+. ||...++.+..+..+.......+ .....+.+..-.+++.++++.
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~--------~~f~~~~~~~e~slI~~Ll~h 857 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP--------ADFFDPEHPEEASLIRWLLSH 857 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC--------cccccccchHHHHHHHHHhcC
Confidence 554 8999999999999999986 57766666665555443222111 011222333456788899999
Q ss_pred CCCCCCCHHHHHH
Q 006903 596 SPNERPSMNQVAV 608 (626)
Q Consensus 596 dP~~RPs~~ev~~ 608 (626)
||++|||+.|+++
T Consensus 858 dP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 858 DPSKRPTATELLN 870 (1351)
T ss_pred CCccCCCHHHHhh
Confidence 9999999999875
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-33 Score=266.49 Aligned_cols=253 Identities=23% Similarity=0.292 Sum_probs=196.7
Q ss_pred cchhhhhcccccccccCCCcceEEEE-eCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEE
Q 006903 341 LKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKL 417 (626)
Q Consensus 341 ~~~~~l~~~~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~ 417 (626)
-+|+|+++-+.++||+|+|+.|-.++ +.+|..+|||++.+.. .....+.+|++++...+ |+||+.+++||+++...|
T Consensus 73 g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FY 152 (463)
T KOG0607|consen 73 GKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFY 152 (463)
T ss_pred chHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEE
Confidence 35899999999999999999999987 8899999999998765 45578899999998874 999999999999999999
Q ss_pred EEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC---eEEeeccC
Q 006903 418 LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME---PCISEYGL 494 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl 494 (626)
||||-|.||+|..+++. ...|+..+.-++..+|+.||.||| .+||.||||||+|||-.+... +||+||-+
T Consensus 153 LVfEKm~GGplLshI~~---~~~F~E~EAs~vvkdia~aLdFlH----~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDL 225 (463)
T KOG0607|consen 153 LVFEKMRGGPLLSHIQK---RKHFNEREASRVVKDIASALDFLH----TKGIAHRDLKPENILCESPNKVSPVKICDFDL 225 (463)
T ss_pred EEEecccCchHHHHHHH---hhhccHHHHHHHHHHHHHHHHHHh----hcCcccccCCccceeecCCCCcCceeeecccc
Confidence 99999999999999964 357899999999999999999999 789999999999999876544 69999987
Q ss_pred ccc--cCCC--------ccccccccccchhhcc-----ccCCCCCcchhHHHHHHHHHHHcCCCCCCCC-cc--------
Q 006903 495 IVT--ENHD--------QSFLAQTSSLKINDIS-----NQMCSTIKADVYGFGVILLELLTGKLVQNNG-FN-------- 550 (626)
Q Consensus 495 ~~~--~~~~--------~~~~~~~~~~~~pe~~-----~~~~~~~k~DVwSfGvvl~elltg~~p~~~~-~~-------- 550 (626)
... .+.+ .....|...||+||+. ....|+.++|.||+|||+|-|++|.+||.+. ..
T Consensus 226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe 305 (463)
T KOG0607|consen 226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGE 305 (463)
T ss_pred ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCC
Confidence 532 1111 1223466779999964 2346789999999999999999999998631 11
Q ss_pred -----hhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 551 -----LATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 551 -----~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....++++.... .++.|... ........+++...+..||.+|-++.+++.
T Consensus 306 ~Cr~CQ~~LFesIQEGk--YeFPdkdW------ahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 306 VCRVCQNKLFESIQEGK--YEFPDKDW------AHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccHHHHHHHHHHHhccC--CcCChhhh------HHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 111233333322 22222211 112234556777778899999999998876
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-32 Score=276.69 Aligned_cols=238 Identities=19% Similarity=0.314 Sum_probs=190.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||++.. .+++.||+|.+..... ..+.+.+|++++++++ ||||+++++++...+..++||||++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAP 85 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCC
Confidence 46799999999999985 4799999999875332 2356888999999998 9999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-- 502 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-- 502 (626)
+++|.+++.. ...+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++++|||++.......
T Consensus 86 ~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh----~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 86 NGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLH----SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999999963 246999999999999999999999 6799999999999999999999999999976432211
Q ss_pred ---------------------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc
Q 006903 503 ---------------------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE 561 (626)
Q Consensus 503 ---------------------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 561 (626)
....++..|++||.......+.++||||||++++|+++|+.|+...... ..+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~ 237 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY-LTFQKILKL 237 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHhc
Confidence 1123456789999887777889999999999999999999998754322 112222211
Q ss_pred ccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCH----HHHHH
Q 006903 562 EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSM----NQVAV 608 (626)
Q Consensus 562 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~----~ev~~ 608 (626)
.+. .+......+.+++.+||+.+|++||++ +|+++
T Consensus 238 ~~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 238 EYS------------FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred CCC------------CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 110 111223457889999999999999999 77654
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=272.97 Aligned_cols=241 Identities=18% Similarity=0.226 Sum_probs=185.6
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC------CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS------ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~------~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||++... .+..+++|.++... ....++..|+.++++++||||+++++++......++||||+
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (260)
T cd08222 5 QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYC 84 (260)
T ss_pred eeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeC
Confidence 367999999999999854 34556666554321 12345778999999999999999999999989999999999
Q ss_pred CCCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 424 PNGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 424 ~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
++++|.+++... .....+++..++.++.|++.||.||| +.+++|+||||+||++++ +.+|++|||++......
T Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 85 EGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH----QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred CCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH----HcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999999988632 23357899999999999999999999 679999999999999986 56999999987643221
Q ss_pred --ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 502 --QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
.....++..|.+||......++.++|+||||+++|+|++|..|+... ............... ..+.
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~ 227 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ-NFLSVVLRIVEGPTP-----------SLPE 227 (260)
T ss_pred ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc-cHHHHHHHHHcCCCC-----------CCcc
Confidence 12234566789999887777788999999999999999999998643 222322222221100 0112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+.+++.+||+.+|++||++.|+++
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 228 TYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred hhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 33446888999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-32 Score=279.38 Aligned_cols=248 Identities=18% Similarity=0.250 Sum_probs=182.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCC--------eEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ--------EKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~--------~~~l 418 (626)
.+.||+|+||.||+|.. .+++.+|+|++..... ....+.+|++++++++||||+++++++.... ..++
T Consensus 13 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~l 92 (311)
T cd07866 13 LGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYM 92 (311)
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEE
Confidence 36799999999999985 4689999998864332 2346789999999999999999999875433 4699
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+.+ ++...+.. ....+++..+..++.|+++||.||| +.+|+||||||+||++++++.+|++|||++...
T Consensus 93 v~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 165 (311)
T cd07866 93 VTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLH----ENHILHRDIKAANILIDNQGILKIADFGLARPY 165 (311)
T ss_pred EEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence 9999975 77777753 2346999999999999999999999 679999999999999999999999999997643
Q ss_pred CCCc--------------cccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc
Q 006903 499 NHDQ--------------SFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW 563 (626)
Q Consensus 499 ~~~~--------------~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 563 (626)
.... ....++..|++||.... ..++.++|||||||++|||++|+.||...... ...........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~~~~~~~~ 244 (311)
T cd07866 166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLHLIFKLCG 244 (311)
T ss_pred cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhC
Confidence 2211 11233566899997644 45688999999999999999999998644332 22221111000
Q ss_pred c------------cc--------cccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 564 T------------VE--------VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 564 ~------------~~--------~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. .. ...+.... ........+.+++.+|++.||++|||+.|++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 245 TPTEETWPGWRSLPGCEGVHSFTNYPRTLEE--RFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCChhhchhhhhcccccccccCCCCCccHHH--HcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0 00 00000000 00112245789999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.98 E-value=5e-32 Score=284.99 Aligned_cols=248 Identities=19% Similarity=0.206 Sum_probs=182.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeC--------------C
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--------------Q 414 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--------------~ 414 (626)
.+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|++++++++||||+++++++... .
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELN 89 (342)
T ss_pred EEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccc
Confidence 47899999999999984 568999999986554 3346788999999999999999999876543 3
Q ss_pred eEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC-CCCCeEEeecc
Q 006903 415 EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN-NNMEPCISEYG 493 (626)
Q Consensus 415 ~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFG 493 (626)
..++||||++ ++|.+++.. ..+++.....++.|++.||.||| +.||+||||||+||+++ +++.+|++|||
T Consensus 90 ~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH----~~givH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 90 SVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIH----SANVLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred eEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEcCCCceEEECCcc
Confidence 5789999997 589888842 35889999999999999999999 67999999999999998 45678999999
Q ss_pred CccccCCC------ccccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc-
Q 006903 494 LIVTENHD------QSFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV- 565 (626)
Q Consensus 494 l~~~~~~~------~~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~- 565 (626)
++...... .....++..|++||... ...++.++|||||||++|||++|+.||.......... .........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~ 239 (342)
T cd07854 161 LARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQ-LILESVPVVR 239 (342)
T ss_pred cceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHhcCCCC
Confidence 98643211 11223566789999754 3457889999999999999999999997544332221 111100000
Q ss_pred -----cc---ccHHHH---------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 566 -----EV---FDEVLI---------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 566 -----~~---~d~~~~---------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. ...... .....+.....+.+++.+||+.||++|||+.|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00 000000 00000112345788999999999999999999984
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.3e-33 Score=279.55 Aligned_cols=237 Identities=20% Similarity=0.222 Sum_probs=191.0
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+||+|+||.||-++ ..+|+.+|.|++.+.. ........|-++|.+++.+.||.+-..|.+++.+++|+..|.||
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGG 270 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGG 270 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCC
Confidence 689999999999998 4579999999986543 23345778999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--SF 504 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~~ 504 (626)
+|.-+|.... ...|+....+.+|.+|+.||.+|| ..+||.||+||+|||||+.|+++|+|.|+|....... ..
T Consensus 271 DLkfHiyn~g-~~gF~e~ra~FYAAEi~cGLehlH----~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~ 345 (591)
T KOG0986|consen 271 DLKFHIYNHG-NPGFDEQRARFYAAEIICGLEHLH----RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRG 345 (591)
T ss_pred ceeEEeeccC-CCCCchHHHHHHHHHHHhhHHHHH----hcceeeccCChhheeeccCCCeEeeccceEEecCCCCcccc
Confidence 9999887533 368999999999999999999999 6799999999999999999999999999997654433 33
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--HHHHhhcccccccccHHHHhhhccHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW--VHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
..||..|||||+.....|+...|.||+||++|||+.|+.||.....-+.+ +.+.... |+ ...++...
T Consensus 346 rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~-------~~----~ey~~kFS 414 (591)
T KOG0986|consen 346 RVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE-------DP----EEYSDKFS 414 (591)
T ss_pred ccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc-------ch----hhcccccC
Confidence 47899999999999888999999999999999999999999743332222 1111111 00 11223333
Q ss_pred HHHHHHHhhccCCCCCCCCCHH
Q 006903 583 LKLLQVALRCINQSPNERPSMN 604 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ 604 (626)
++..++....|+.||++|--.+
T Consensus 415 ~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 415 EEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred HHHHHHHHHHHccCHHHhccCC
Confidence 4466677778899999997543
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-32 Score=264.89 Aligned_cols=242 Identities=20% Similarity=0.281 Sum_probs=194.1
Q ss_pred ccccchhhhhcccccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC-CHH---HHHHHHHHhccCCCCCccccceEEEe
Q 006903 338 VNKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI-SSE---DFKNRMQKIDHVKHPNVLPPLAYYCS 412 (626)
Q Consensus 338 ~~~~~~~~l~~~~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~-~~~---~~~~ei~~l~~l~H~nIv~l~g~~~~ 412 (626)
..+++.+|+.. -++||+|.||+|..++ ..+++.+|+|++++.-. ..+ .-..|-++|+..+||.+..+...|.+
T Consensus 162 ~~kvTm~dFdf--LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt 239 (516)
T KOG0690|consen 162 KNKVTMEDFDF--LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT 239 (516)
T ss_pred cceeccchhhH--HHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc
Confidence 34556665533 3789999999999998 66799999999988653 232 34578889999999999999999999
Q ss_pred CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeec
Q 006903 413 KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEY 492 (626)
Q Consensus 413 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 492 (626)
.+.+|.||||..||.|+-+|.. ...++......+-.+|..||.||| +++||.||||.+|.|+|.+|++||+||
T Consensus 240 ~drlCFVMeyanGGeLf~HLsr---er~FsE~RtRFYGaEIvsAL~YLH----s~~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 240 QDRLCFVMEYANGGELFFHLSR---ERVFSEDRTRFYGAEIVSALGYLH----SRNIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred CceEEEEEEEccCceEeeehhh---hhcccchhhhhhhHHHHHHhhhhh----hCCeeeeechhhhheeccCCceEeeec
Confidence 9999999999999999999853 457888888899999999999999 689999999999999999999999999
Q ss_pred cCcccc---CCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 493 GLIVTE---NHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 493 Gl~~~~---~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
|+++.. .......+|++.|.+||++....|+..+|.|.+|||+|||++|+.||++..+- ..+.-+..++..
T Consensus 313 GLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~-kLFeLIl~ed~k----- 386 (516)
T KOG0690|consen 313 GLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE-KLFELILMEDLK----- 386 (516)
T ss_pred ccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh-HHHHHHHhhhcc-----
Confidence 998753 33345678999999999999999999999999999999999999999865432 222222222110
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCC
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERP 601 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 601 (626)
++....++...++...+..||.+|-
T Consensus 387 -------FPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 387 -------FPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred -------CCccCCHHHHHHHHHHhhcChHhhc
Confidence 1111122345566678889999995
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-32 Score=271.84 Aligned_cols=220 Identities=20% Similarity=0.190 Sum_probs=173.1
Q ss_pred CCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhHhhcCC
Q 006903 357 GKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGS 435 (626)
Q Consensus 357 G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~ 435 (626)
|.||.||+++ ..+++.||+|+++... .+.+|...+....||||+++++++...+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~- 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK- 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH-
Confidence 8899999998 4578999999987643 334455555566799999999999999999999999999999999863
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccccccccccchhh
Q 006903 436 ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIND 515 (626)
Q Consensus 436 ~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe 515 (626)
...+++.....++.|++.||.|+| +++|+||||||+||+++.++.++++|||.+............+..|++||
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE 152 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALH----REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPE 152 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCc
Confidence 235899999999999999999999 67999999999999999999999999998755443333334456789999
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCC
Q 006903 516 ISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQ 595 (626)
Q Consensus 516 ~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~ 595 (626)
......++.++||||+|+++|||++|+.|+....... ......+ .+......+.+++.+|++.
T Consensus 153 ~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------~~~~~~~----------~~~~~~~~~~~li~~~l~~ 215 (237)
T cd05576 153 VGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------NTHTTLN----------IPEWVSEEARSLLQQLLQF 215 (237)
T ss_pred ccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------ccccccC----------CcccCCHHHHHHHHHHccC
Confidence 8877778899999999999999999998764221100 0000000 1111234578899999999
Q ss_pred CCCCCCCHH
Q 006903 596 SPNERPSMN 604 (626)
Q Consensus 596 dP~~RPs~~ 604 (626)
||++||++.
T Consensus 216 dp~~R~~~~ 224 (237)
T cd05576 216 NPTERLGAG 224 (237)
T ss_pred CHHHhcCCC
Confidence 999999973
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-32 Score=263.30 Aligned_cols=243 Identities=19% Similarity=0.264 Sum_probs=191.6
Q ss_pred cccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhcc-CCCCCccccceEEEe----CCeEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDH-VKHPNVLPPLAYYCS----KQEKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~-l~H~nIv~l~g~~~~----~~~~~lv~Ey~ 423 (626)
..++||-|-.|.|..+. ..+++.+|+|.+.+. ...++|++..-. -.|||||.++++|.. ...+.+|||+|
T Consensus 66 s~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~m 141 (400)
T KOG0604|consen 66 SWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECM 141 (400)
T ss_pred hhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecc
Confidence 35899999999999998 567999999998763 456778876433 369999999998764 35678999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCccccCC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENH 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~~~ 500 (626)
+||.|+..+..+ ..+.+++.+.-.|+.||+.|+.||| +.+|.||||||+|+|... +-..|++|||+|+....
T Consensus 142 eGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH----~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~ 216 (400)
T KOG0604|consen 142 EGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLH----SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE 216 (400)
T ss_pred cchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHH----hcchhhccCChhheeeecCCCCcceEecccccccccCC
Confidence 999999999753 3467999999999999999999999 789999999999999974 45689999999987553
Q ss_pred --CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCC--CcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 501 --DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNN--GFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 501 --~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
.-..-+-|++|.+||+.+...|+..+|+||+||++|-|++|.+||+. +..+..-++..++.... ++.++
T Consensus 217 ~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy-~FP~p------ 289 (400)
T KOG0604|consen 217 PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQY-EFPEP------ 289 (400)
T ss_pred CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCc-cCCCh------
Confidence 22334568899999999999999999999999999999999999973 33333333333332221 12121
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
-..+..+...++++..|..+|++|.|++|++.
T Consensus 290 EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 290 EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred hHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 11233455778888999999999999999876
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-32 Score=260.43 Aligned_cols=191 Identities=20% Similarity=0.291 Sum_probs=159.1
Q ss_pred ccccccCCCcceEEEEeCC-----CcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEe-CCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVLDD-----GLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCS-KQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~-----g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-~~~~~lv~E 421 (626)
...||+|.||.||+|.-.+ ...+|||+++... .-.....+||.+++.++||||+++..++.+ +...++++|
T Consensus 29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fd 108 (438)
T KOG0666|consen 29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFD 108 (438)
T ss_pred cceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEeh
Confidence 4679999999999996322 3479999998653 223567899999999999999999999887 778999999
Q ss_pred ecCCCChhHhhcCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC----CCeEEeeccCc
Q 006903 422 YQPNGSLFNLLHGS--ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN----MEPCISEYGLI 495 (626)
Q Consensus 422 y~~~g~L~~~l~~~--~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGl~ 495 (626)
|.+. +|.+.++-. .....++-.....|+.||+.|+.||| ++=|+||||||.|||+..+ |.+||+|||++
T Consensus 109 YAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH----~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGla 183 (438)
T KOG0666|consen 109 YAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH----SNWVLHRDLKPANILVMGDGPERGRVKIADLGLA 183 (438)
T ss_pred hhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh----hhheeeccCCcceEEEeccCCccCeeEeecccHH
Confidence 9987 899988532 23357888999999999999999999 5679999999999999877 89999999999
Q ss_pred cccCCC------ccccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCC
Q 006903 496 VTENHD------QSFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQN 546 (626)
Q Consensus 496 ~~~~~~------~~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~ 546 (626)
+..... ...+.-|.+|.+||... ...||.+.||||.|||+.||+|-++.|.
T Consensus 184 R~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~ 241 (438)
T KOG0666|consen 184 RLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK 241 (438)
T ss_pred HHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence 764332 23355688999999765 4578999999999999999999887764
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=276.70 Aligned_cols=249 Identities=19% Similarity=0.179 Sum_probs=182.1
Q ss_pred ccccccCCCcceEEEEeC-C--CcEEEEEEcCCCC---CCHHHHHHHHHHhccC-CCCCccccceEEEeC----CeEEEE
Q 006903 351 AELLGRGKHGSLYRVVLD-D--GLMLAVKRLRDWS---ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSK----QEKLLV 419 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~--g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~----~~~~lv 419 (626)
.+.||+|+||.||++... + +..||+|++.... ...+.+.+|+++++++ +||||+++++++... ...+++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 84 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLY 84 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEE
Confidence 367999999999999953 4 7899999987532 2245678899999999 599999999875432 457889
Q ss_pred EeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 420 YEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 420 ~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
+||+. ++|.+++.. ...+++..+..++.|++.||.||| ..||+||||||+||++++++.+||+|||+++...
T Consensus 85 ~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 85 EELME-ADLHQIIRS---GQPLTDAHFQSFIYQILCGLKYIH----SANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred Eeccc-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 99986 689998853 356899999999999999999999 6799999999999999999999999999986432
Q ss_pred CC-------ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc------ccc
Q 006903 500 HD-------QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE------WTV 565 (626)
Q Consensus 500 ~~-------~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~------~~~ 565 (626)
.. .....++..|++||.... ..++.++|||||||++|||++|+.||...... .........- ...
T Consensus 157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (332)
T cd07857 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLGTPDEETLS 235 (332)
T ss_pred cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 11 112346778999997644 45788999999999999999999998643321 1111111100 000
Q ss_pred ccccHH-------------HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 566 EVFDEV-------------LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 566 ~~~d~~-------------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...++. .......+.....+.+++.+|++.||++|||+.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000 0000000112346889999999999999999999875
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-32 Score=268.91 Aligned_cols=250 Identities=18% Similarity=0.288 Sum_probs=200.9
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCC--C----CccccceEEEeCCeEEEEEeecC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKH--P----NVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H--~----nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
..+|+|.||.|-++. ...+..||||+++.-....+..+-|+++++++.+ | -+|.+.+||...+..++|+|.+
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell- 173 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL- 173 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-
Confidence 679999999999998 4458999999998877777888899999999943 2 3778888899999999999998
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC--------------------C
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN--------------------N 484 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~--------------------~ 484 (626)
|-+++++|.. .+..+++...+..|+.|++++++||| +.+++|-||||+|||+-+ +
T Consensus 174 G~S~~dFlk~-N~y~~fpi~~ir~m~~QL~~sv~fLh----~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks 248 (415)
T KOG0671|consen 174 GLSTFDFLKE-NNYIPFPIDHIRHMGYQLLESVAFLH----DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKS 248 (415)
T ss_pred ChhHHHHhcc-CCccccchHHHHHHHHHHHHHHHHHH----hcceeecCCChheEEEeccceEEEeccCCccceeccCCC
Confidence 4599999975 34568999999999999999999999 789999999999999842 3
Q ss_pred CCeEEeeccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchh--HHHHHHhhcc
Q 006903 485 MEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLA--TWVHSVVREE 562 (626)
Q Consensus 485 ~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~--~~~~~~~~~~ 562 (626)
..+||.|||-|+......+....|..|.|||++.+..++.++||||+||||+|+.||...|+...+.. ..++.+..+.
T Consensus 249 ~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~ 328 (415)
T KOG0671|consen 249 TAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPI 328 (415)
T ss_pred cceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCC
Confidence 45799999999988887788899999999999999999999999999999999999999987554332 2233332211
Q ss_pred ccccc--------------cc------------------HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 563 WTVEV--------------FD------------------EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 563 ~~~~~--------------~d------------------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+ +| +.-......+.+..++++|+.+++..||.+|+|+.|++.
T Consensus 329 -P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 329 -PSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred -cHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 0000 00 000011123445667999999999999999999999975
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=237.61 Aligned_cols=250 Identities=18% Similarity=0.211 Sum_probs=188.4
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
+.||+|.||+||||+ ..+++.||+|+++-.+. -.....+||.+++.++|+|||++++....+...-+|+|||.. +
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-d 86 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-D 86 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-H
Confidence 679999999999999 66789999999875442 346789999999999999999999999999999999999964 8
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---SF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~~ 504 (626)
|..+.... ...++......++.|+.+||.|+| ++++.|||+||.|.|++.+|+.|++|||+++...-.. +.
T Consensus 87 lkkyfdsl--ng~~d~~~~rsfmlqllrgl~fch----shnvlhrdlkpqnllin~ngelkladfglarafgipvrcysa 160 (292)
T KOG0662|consen 87 LKKYFDSL--NGDLDPEIVRSFMLQLLRGLGFCH----SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA 160 (292)
T ss_pred HHHHHHhc--CCcCCHHHHHHHHHHHHhhhhhhh----hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeec
Confidence 88887543 346888889999999999999999 6789999999999999999999999999987654332 22
Q ss_pred cccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-------cccc--ccccHHH--
Q 006903 505 LAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-------EWTV--EVFDEVL-- 572 (626)
Q Consensus 505 ~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-------~~~~--~~~d~~~-- 572 (626)
-..+.+|.+|.+.. ..-|++..|+||-||++.|+.....|...|.+..+...++.+. .|.. ...|...
T Consensus 161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp 240 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP 240 (292)
T ss_pred eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence 23467889998754 4568899999999999999988655555566665555554432 1211 1111100
Q ss_pred --HhhhccHHHHH----HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 --IAEAASEERML----KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 --~~~~~~~~~~~----~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+..+ .=.+++.+.+.-+|.+|.++++.++
T Consensus 241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 00000111111 2245666677779999999998765
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=286.80 Aligned_cols=243 Identities=17% Similarity=0.285 Sum_probs=202.0
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEe-----CCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCS-----KQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~-----~~~~~lv~Ey~ 423 (626)
.++||.|.+|.||+++ .++++.+|+|++......++++..|.++++.. .|||++.++|+|.. ++++|||||||
T Consensus 24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC 103 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFC 103 (953)
T ss_pred EEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeecc
Confidence 4789999999999998 67899999999988777788899999998877 69999999999864 47899999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--- 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--- 500 (626)
.+|+.-|+++... +..+.|..+..|++.+++|+.+|| .+.++|||||-.|||++.++.+|+.|||.+...+.
T Consensus 104 ~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH----~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~g 178 (953)
T KOG0587|consen 104 GGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLH----NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVG 178 (953)
T ss_pred CCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHh----hcceeeecccCceEEEeccCcEEEeeeeeeeeeecccc
Confidence 9999999998755 678999999999999999999999 67899999999999999999999999999765433
Q ss_pred CccccccccccchhhccccC-----CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 501 DQSFLAQTSSLKINDISNQM-----CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~~-----~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
......|+++|||||++... .|+.++|+||+|++..||.-|.+|+.+.......+....... +.+
T Consensus 179 rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPP-------PkL--- 248 (953)
T KOG0587|consen 179 RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP-------PKL--- 248 (953)
T ss_pred cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCC-------ccc---
Confidence 23446789999999986543 357789999999999999999999876655443332211111 111
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.....++.+++..|+..|-++||++.++++
T Consensus 249 krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 249 KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred cchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 124556778999999999999999999988764
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=296.29 Aligned_cols=139 Identities=25% Similarity=0.339 Sum_probs=123.9
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCC----HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSIS----SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +++.||||+++..... ...+.+|+.++..++||||+++++++...+..|+||||+++
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g 88 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIG 88 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCC
Confidence 367999999999999954 6899999999754321 25688899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
++|.+++.. ...+++...+.++.||+.||.||| ..+||||||||+|||++.++.+||+|||+++
T Consensus 89 ~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH----~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 89 GDVKSLLHI---YGYFDEEMAVKYISEVALALDYLH----RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999963 245888999999999999999999 5799999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=278.79 Aligned_cols=232 Identities=20% Similarity=0.233 Sum_probs=184.5
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhcc-CCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDH-VKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~-l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
..+|.|+|+.|-++. ..+++..+||++.+. ..+-.+|+.++.. -+||||+++.+.+.+..+.|+|||++.+|-+.
T Consensus 328 ~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell 404 (612)
T KOG0603|consen 328 EELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELL 404 (612)
T ss_pred cccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHH
Confidence 459999999999887 567899999999765 2234456655443 47999999999999999999999999999988
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee-CCCCCeEEeeccCccccCCCccccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF-NNNMEPCISEYGLIVTENHDQSFLAQT 508 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl-~~~~~~kl~DFGl~~~~~~~~~~~~~~ 508 (626)
+.+...+ .+. ..+..|+.+++.|+.||| ++|||||||||+|||+ ++.++++|+|||.++........-+-+
T Consensus 405 ~ri~~~~---~~~-~e~~~w~~~lv~Av~~LH----~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t 476 (612)
T KOG0603|consen 405 RRIRSKP---EFC-SEASQWAAELVSAVDYLH----EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALT 476 (612)
T ss_pred HHHHhcc---hhH-HHHHHHHHHHHHHHHHHH----hcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchh
Confidence 8886422 222 667789999999999999 6899999999999999 589999999999987755542223446
Q ss_pred cccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHH
Q 006903 509 SSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQV 588 (626)
Q Consensus 509 ~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 588 (626)
..|.|||+.....|++++|+||||++||||++|+.||..+.+-.+....+...... ........+|
T Consensus 477 ~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s--------------~~vS~~AKdL 542 (612)
T KOG0603|consen 477 LQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS--------------ECVSDEAKDL 542 (612)
T ss_pred hcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc--------------cccCHHHHHH
Confidence 67899999998899999999999999999999999997554443333333322211 2223347788
Q ss_pred HhhccCCCCCCCCCHHHHHH
Q 006903 589 ALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 589 ~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.+||+.||.+||+|.++..
T Consensus 543 l~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 543 LQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred HHHhccCChhhCcChhhhcc
Confidence 89999999999999999865
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=255.32 Aligned_cols=235 Identities=21% Similarity=0.296 Sum_probs=189.6
Q ss_pred CCcceEEEEeC-CCcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhHhhcC
Q 006903 358 KHGSLYRVVLD-DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHG 434 (626)
Q Consensus 358 ~fG~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~ 434 (626)
+||.||+|... +++.+|+|++...... .+.+.+|++.+++++|+||+++++++......+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999965 5899999999765432 57899999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--ccccccccccc
Q 006903 435 SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QSFLAQTSSLK 512 (626)
Q Consensus 435 ~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~~~~~~~~~~ 512 (626)
. ..+++..+..++.+++.++.||| ..+|+|+||+|+||++++++.++++|||.+...... .....+...|.
T Consensus 81 ~---~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 153 (244)
T smart00220 81 R---GRLSEDEARFYARQILSALEYLH----SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYM 153 (244)
T ss_pred c---cCCCHHHHHHHHHHHHHHHHHHH----HcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCC
Confidence 2 23889999999999999999999 579999999999999999999999999998654432 23344566789
Q ss_pred hhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhc
Q 006903 513 INDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRC 592 (626)
Q Consensus 513 ~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C 592 (626)
+||.......+.++||||||+++||+++|..|+....+.................. .......+.+++.+|
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~i~~~ 224 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPP---------EWKISPEAKDLIRKL 224 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccc---------cccCCHHHHHHHHHH
Confidence 99988777778899999999999999999999875434333333322221111000 000234588899999
Q ss_pred cCCCCCCCCCHHHHHH
Q 006903 593 INQSPNERPSMNQVAV 608 (626)
Q Consensus 593 l~~dP~~RPs~~ev~~ 608 (626)
+..+|++||++.++++
T Consensus 225 l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 225 LVKDPEKRLTAEEALQ 240 (244)
T ss_pred ccCCchhccCHHHHhh
Confidence 9999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-32 Score=254.71 Aligned_cols=251 Identities=18% Similarity=0.243 Sum_probs=185.8
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCC---CCCHHHHHHHHHHhccCCCCCccccceEEEeC--------CeEEEE
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDW---SISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--------QEKLLV 419 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--------~~~~lv 419 (626)
..||+|.||.||+|+. .+|+.||+|++--. ..-.....+|+++|..++|+|++.+++.|.+. ...|+|
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylV 102 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLV 102 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeee
Confidence 6799999999999994 45888999876432 23456788999999999999999999988643 347999
Q ss_pred EeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 420 YEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 420 ~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
|++|+. +|.-+|.. ....++..++.+++.++..||.|+| .+.|+|||+||+|+||+.++..|++|||+++...
T Consensus 103 f~~ceh-DLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~iH----r~kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 103 FDFCEH-DLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYYIH----RNKILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred HHHhhh-hHHHHhcC--ccccccHHHHHHHHHHHHHHHHHHH----HhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 999986 89999963 3357889999999999999999999 6789999999999999999999999999986532
Q ss_pred CCc-------cccccccccchhhcc-ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH-HHhhcccccccccH
Q 006903 500 HDQ-------SFLAQTSSLKINDIS-NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH-SVVREEWTVEVFDE 570 (626)
Q Consensus 500 ~~~-------~~~~~~~~~~~pe~~-~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~d~ 570 (626)
... +....|.+|.+||.+ +...|+++.|||.-|||+.||.||.+.+....+..+... +........+++..
T Consensus 176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~ 255 (376)
T KOG0669|consen 176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPN 255 (376)
T ss_pred cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCC
Confidence 211 112337789999975 456789999999999999999999987765444333211 11111111111110
Q ss_pred --------HHHhhh-------ccHHHHH------HHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 571 --------VLIAEA-------ASEERML------KLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 571 --------~~~~~~-------~~~~~~~------~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+..+. .-++.+. ..++++.+++..||.+||++.+++..
T Consensus 256 ~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 256 VDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 000000 0011122 46788889999999999999998654
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=292.96 Aligned_cols=241 Identities=17% Similarity=0.225 Sum_probs=191.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.++||+|+||.|..++. .++++||+|++.++.. ...-|..|-.+|..-+.+-|+.++-.|.++.++|+|||||+|
T Consensus 80 lKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pG 159 (1317)
T KOG0612|consen 80 LKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPG 159 (1317)
T ss_pred HHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccC
Confidence 37899999999999985 5689999999988652 334688999999998999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|-.++... ..++......++..|..||.-+| +.|+|||||||+|||||..|++|++|||.+.....+.
T Consensus 160 GDlltLlSk~---~~~pE~~ArFY~aEiVlAldslH----~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~ 232 (1317)
T KOG0612|consen 160 GDLLTLLSKF---DRLPEDWARFYTAEIVLALDSLH----SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVR 232 (1317)
T ss_pred chHHHHHhhc---CCChHHHHHHHHHHHHHHHHHHH----hccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEE
Confidence 9999999632 26888888899999999999999 7899999999999999999999999999875544332
Q ss_pred -cccccccccchhhcccc-----CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 -SFLAQTSSLKINDISNQ-----MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~-----~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
....|||.|.+||+... ..|+..+|+||+||++|||+.|..||+. .++++-+..++.......+.+...
T Consensus 233 s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa-dslveTY~KIm~hk~~l~FP~~~~---- 307 (1317)
T KOG0612|consen 233 SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA-DSLVETYGKIMNHKESLSFPDETD---- 307 (1317)
T ss_pred eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH-HHHHHHHHHHhchhhhcCCCcccc----
Confidence 34578999999997532 4678999999999999999999999974 355665666655533332221111
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPS---MNQVAV 608 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~ev~~ 608 (626)
. .....+||.+.+ -+|+.|-. ++++..
T Consensus 308 V----SeeakdLI~~ll-~~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 308 V----SEEAKDLIEALL-CDREVRLGRNGIEDIKN 337 (1317)
T ss_pred c----CHHHHHHHHHHh-cChhhhcccccHHHHHh
Confidence 1 223455555543 36888887 888755
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=273.17 Aligned_cols=242 Identities=16% Similarity=0.263 Sum_probs=197.1
Q ss_pred cccccccCCCcceEEEE-eCCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 350 PAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.++||+|.||+||-|+ .++|+.||||.+.+.. ....++++|+.+|+.++||.||.+--.|++.+..++|||-+.
T Consensus 568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~- 646 (888)
T KOG4236|consen 568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH- 646 (888)
T ss_pred hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-
Confidence 46899999999999998 5679999999997654 344678999999999999999999999999999999999995
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC---CCeEEeeccCccccCCC-
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN---MEPCISEYGLIVTENHD- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl~~~~~~~- 501 (626)
|+..+.+-.. ....++......++.||+.||.||| -++|||+||||+|||+.+. -.+|+||||+|+.....
T Consensus 647 GDMLEMILSs-EkgRL~er~TkFlvtQIL~ALr~LH----~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 647 GDMLEMILSS-EKGRLPERITKFLVTQILVALRYLH----FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred chHHHHHHHh-hcccchHHHHHHHHHHHHHHHHHhh----hcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 5666655433 3357888888999999999999999 5799999999999999753 35899999999876543
Q ss_pred -ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 502 -QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 502 -~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
.....||+.|.+||+.....|...-|+||.||++|--++|..||..+.++.+.++.. .+. +. .....+
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNA---aFM---yP-----p~PW~e 790 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNA---AFM---YP-----PNPWSE 790 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcc---ccc---cC-----CCchhh
Confidence 345679999999999999999999999999999999999999999877766544321 111 00 112233
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....++++...++..-++|-|..+.+.
T Consensus 791 is~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 791 ISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred cCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 3445788889999999999999887654
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-31 Score=260.36 Aligned_cols=231 Identities=18% Similarity=0.242 Sum_probs=184.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCH----HHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS----EDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~----~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
..+||+|+||+|..|.. .+.+.+|||++++.-.-+ +--..|-++|+-- +-|.++.+...|.+-+.+|.||||+.
T Consensus 354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvn 433 (683)
T KOG0696|consen 354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVN 433 (683)
T ss_pred EEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEec
Confidence 47899999999999984 457889999998764221 2233555565544 57899999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc---CCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE---NHD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~---~~~ 501 (626)
+|+|--.+.. -..+.+.....+|.+||-||-||| ++|||.||||.+|||||.+|++||+|||+++.. ...
T Consensus 434 GGDLMyhiQQ---~GkFKEp~AvFYAaEiaigLFFLh----~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~T 506 (683)
T KOG0696|consen 434 GGDLMYHIQQ---VGKFKEPVAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVT 506 (683)
T ss_pred CchhhhHHHH---hcccCCchhhhhhHHHHHHhhhhh----cCCeeeeeccccceEeccCCceEeeecccccccccCCcc
Confidence 9999888853 346778889999999999999999 789999999999999999999999999998652 233
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....+||+.|+|||++.+.+|+..+|+|||||+||||+.|++||+++ +-.+.+..+...... .+...
T Consensus 507 TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe-DE~elF~aI~ehnvs------------yPKsl 573 (683)
T KOG0696|consen 507 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE-DEDELFQAIMEHNVS------------YPKSL 573 (683)
T ss_pred eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHHccCc------------Ccccc
Confidence 44578999999999999999999999999999999999999999854 444555555443211 12222
Q ss_pred HHHHHHHHhhccCCCCCCCC
Q 006903 582 MLKLLQVALRCINQSPNERP 601 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RP 601 (626)
..+..++....+...|.+|-
T Consensus 574 SkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 574 SKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred cHHHHHHHHHHhhcCCcccc
Confidence 33456666777888999884
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-30 Score=235.68 Aligned_cols=208 Identities=21% Similarity=0.268 Sum_probs=169.0
Q ss_pred cccccccCCCcceEEEE-eCCCcEEEEEEcCCCC--CCHHHHHHHHHHh-ccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 350 PAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS--ISSEDFKNRMQKI-DHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~ei~~l-~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
....||+|+||.|-+-+ ..+|+..|+|+++..- +.++...+|+.+. +....|.+|.++|.+..+...|+.||.|..
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t 129 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT 129 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh
Confidence 34789999999998887 5689999999997654 3345677888764 556799999999999999999999999964
Q ss_pred CChhHhhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--c
Q 006903 426 GSLFNLLHG-SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--Q 502 (626)
Q Consensus 426 g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~ 502 (626)
+|..+-+. .+.+..+++...=+||..+.+||.|||+. ..++|||+||+|||++.+|++|+||||++...... .
T Consensus 130 -Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k---L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAk 205 (282)
T KOG0984|consen 130 -SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK---LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAK 205 (282)
T ss_pred -hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH---hhhhhccCCcceEEEccCCcEEEcccccceeehhhhHH
Confidence 78776542 23456788888889999999999999975 46999999999999999999999999997543322 2
Q ss_pred cccccccccchhhccc----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc
Q 006903 503 SFLAQTSSLKINDISN----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE 561 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 561 (626)
+.-+|-..|+|||... ...|+-|+||||+|+++.||.+++.|++......+.++.++.+
T Consensus 206 t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 206 TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 3345677899999754 3367889999999999999999999998777766666666544
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=273.47 Aligned_cols=250 Identities=18% Similarity=0.187 Sum_probs=168.3
Q ss_pred ccccccCCCcceEEEEe-----------------CCCcEEEEEEcCCCCC-CHHH--------------HHHHHHHhccC
Q 006903 351 AELLGRGKHGSLYRVVL-----------------DDGLMLAVKRLRDWSI-SSED--------------FKNRMQKIDHV 398 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-----------------~~g~~vAvK~l~~~~~-~~~~--------------~~~ei~~l~~l 398 (626)
.+.||+|+||.||+|.. .+++.||||++..... ..++ +..|+.++.++
T Consensus 150 ~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l 229 (507)
T PLN03224 150 RDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKI 229 (507)
T ss_pred eeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHh
Confidence 47899999999999963 2356899999865331 1122 33466677777
Q ss_pred CCCCc-----cccceEEEe--------CCeEEEEEeecCCCChhHhhcCCCC---------------------CCCCCHH
Q 006903 399 KHPNV-----LPPLAYYCS--------KQEKLLVYEYQPNGSLFNLLHGSEN---------------------GQSFDWG 444 (626)
Q Consensus 399 ~H~nI-----v~l~g~~~~--------~~~~~lv~Ey~~~g~L~~~l~~~~~---------------------~~~l~~~ 444 (626)
+|.++ ++++++|.. ++..++||||+++|+|.++++.... ...++|.
T Consensus 230 ~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~ 309 (507)
T PLN03224 230 KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDIN 309 (507)
T ss_pred hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHH
Confidence 66654 677887653 3568999999999999999864211 1235678
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccccccccchhhccccC
Q 006903 445 SRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLAQTSSLKINDISNQM 520 (626)
Q Consensus 445 ~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~~~~~~~~pe~~~~~ 520 (626)
.+..++.|++.||.|+| +.+|+||||||+|||++.++.+||+|||++....... .....++.|++||.....
T Consensus 310 ~~~~i~~ql~~aL~~lH----~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~ 385 (507)
T PLN03224 310 VIKGVMRQVLTGLRKLH----RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMP 385 (507)
T ss_pred HHHHHHHHHHHHHHHHH----HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCC
Confidence 89999999999999999 6789999999999999999999999999986432211 112336779999975422
Q ss_pred C----------------------CCCcchhHHHHHHHHHHHcCCC-CCCCCcchhHHHHHHhhc--ccc---cccccHHH
Q 006903 521 C----------------------STIKADVYGFGVILLELLTGKL-VQNNGFNLATWVHSVVRE--EWT---VEVFDEVL 572 (626)
Q Consensus 521 ~----------------------~~~k~DVwSfGvvl~elltg~~-p~~~~~~~~~~~~~~~~~--~~~---~~~~d~~~ 572 (626)
. ...+.||||+||++|||++|.. |+.+.............. .|. ....+..
T Consensus 386 ~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~- 464 (507)
T PLN03224 386 QSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFS- 464 (507)
T ss_pred CCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcc-
Confidence 1 1235799999999999999986 543211111100000000 000 0000000
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCC---CCCCCHHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSP---NERPSMNQVAVM 609 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP---~~RPs~~ev~~~ 609 (626)
..+.......+++.+++..+| .+|+|++|++++
T Consensus 465 ----~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 465 ----LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ----cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 011123457788888888765 789999999763
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-30 Score=258.62 Aligned_cols=243 Identities=21% Similarity=0.220 Sum_probs=187.0
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCH--------HHHHHHHHHhccCCCCCccccceEEE-eCCeEEEEEe
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS--------EDFKNRMQKIDHVKHPNVLPPLAYYC-SKQEKLLVYE 421 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~--------~~~~~ei~~l~~l~H~nIv~l~g~~~-~~~~~~lv~E 421 (626)
.+||+|+|+.||||. +...+-||||+-....... +...+|.++.+.+.||.||++++|+. +.+.+|-|+|
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLE 548 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLE 548 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeee
Confidence 479999999999998 6667889999865332211 34668999999999999999999986 4567899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCcccc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTE 498 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~ 498 (626)
||+|.+|.-||+ ....++..+...|+.||+.||.||.+. +++|||-||||.||||-+ .|.+||+|||+++..
T Consensus 549 YceGNDLDFYLK---QhklmSEKEARSIiMQiVnAL~YLNEi--kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIM 623 (775)
T KOG1151|consen 549 YCEGNDLDFYLK---QHKLMSEKEARSIIMQIVNALKYLNEI--KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIM 623 (775)
T ss_pred ecCCCchhHHHH---hhhhhhHHHHHHHHHHHHHHHHHHhcc--CCCeeeeccCCccEEEecCcccceeEeeecchhhhc
Confidence 999999999995 345788999999999999999999975 678999999999999964 577999999998764
Q ss_pred CCCc----------cccccccccchhhccccC----CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHH--hhcc
Q 006903 499 NHDQ----------SFLAQTSSLKINDISNQM----CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV--VREE 562 (626)
Q Consensus 499 ~~~~----------~~~~~~~~~~~pe~~~~~----~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~--~~~~ 562 (626)
..+. +..+|+.+|.+||.+-.. ..+.|+||||.|||+|..+.|+.||.+.....+.+... +...
T Consensus 624 dddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAt 703 (775)
T KOG1151|consen 624 DDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKAT 703 (775)
T ss_pred cCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcce
Confidence 3321 345789999999975432 34789999999999999999999998665544433221 1110
Q ss_pred cccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 563 WTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 563 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. .+. ..+....+..+++.+|+++.-++|.+..++..
T Consensus 704 EV--qFP-------~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 704 EV--QFP-------PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred ec--cCC-------CCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 00 010 11112234667889999999999998888764
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-30 Score=265.28 Aligned_cols=239 Identities=18% Similarity=0.240 Sum_probs=194.5
Q ss_pred cccccCCCcceEEEEeCCC-cEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVLDDG-LMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g-~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
..||-|+||.|-.+..... ..+|+|.+++.. ..++.+..|-++|...+.|.||+++..|.+....|+.||-|-||
T Consensus 426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGG 505 (732)
T KOG0614|consen 426 ATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGG 505 (732)
T ss_pred hhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCc
Confidence 5699999999998886543 348999988654 23456889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC--Cccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--DQSF 504 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--~~~~ 504 (626)
.|...|+. .+.|+......++.++.+|+.||| .+|||.|||||+|++||.+|.+|+.|||+|+.... ....
T Consensus 506 ElWTiLrd---Rg~Fdd~tarF~~acv~EAfeYLH----~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwT 578 (732)
T KOG0614|consen 506 ELWTILRD---RGSFDDYTARFYVACVLEAFEYLH----RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWT 578 (732)
T ss_pred hhhhhhhh---cCCcccchhhhhHHHHHHHHHHHH----hcCceeccCChhheeeccCCceEEeehhhHHHhccCCceee
Confidence 99999964 457888889999999999999999 78999999999999999999999999999987543 3345
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
.+||+.|.+||++.....+..+|.||+|+++|||+||.+||.....+..+ ..+...-...+ .+......
T Consensus 579 FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktY-n~ILkGid~i~----------~Pr~I~k~ 647 (732)
T KOG0614|consen 579 FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTY-NLILKGIDKIE----------FPRRITKT 647 (732)
T ss_pred ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHH-HHHHhhhhhhh----------cccccchh
Confidence 68999999999999988999999999999999999999999865544433 33333221111 11222334
Q ss_pred HHHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 585 LLQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
..+++++.+..+|.+|-- +.||-+
T Consensus 648 a~~Lik~LCr~~P~ERLG~~~~gI~DIkk 676 (732)
T KOG0614|consen 648 ATDLIKKLCRDNPTERLGYQKGGINDIKK 676 (732)
T ss_pred HHHHHHHHHhcCcHhhhccccCChHHHHh
Confidence 667888888999999975 556654
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=277.93 Aligned_cols=250 Identities=16% Similarity=0.186 Sum_probs=159.3
Q ss_pred ccccccCCCcceEEEEeC-C----CcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceE------EEeCCeEEEE
Q 006903 351 AELLGRGKHGSLYRVVLD-D----GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAY------YCSKQEKLLV 419 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~----g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~------~~~~~~~~lv 419 (626)
.+.||+|+||.||+|+.. + +..||||++...... +....| .+....+.+++.+... .......++|
T Consensus 137 ~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LV 213 (566)
T PLN03225 137 GKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-EIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEYWLV 213 (566)
T ss_pred eEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-HHHHHH--HHHhhchhhHHHHHHhhhcccccccCCceEEE
Confidence 478999999999999954 4 789999998653221 111111 1222223333333222 2345678999
Q ss_pred EeecCCCChhHhhcCCCCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC
Q 006903 420 YEYQPNGSLFNLLHGSENG-----------------QSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN 482 (626)
Q Consensus 420 ~Ey~~~g~L~~~l~~~~~~-----------------~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~ 482 (626)
|||+++++|.+++...... .......+..++.|++.||.||| +++|+||||||+|||++
T Consensus 214 ~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH----~~gIiHRDLKP~NILl~ 289 (566)
T PLN03225 214 WRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH----STGIVHRDVKPQNIIFS 289 (566)
T ss_pred EEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH----HCCEEeCcCCHHHEEEe
Confidence 9999999999998642210 01112345679999999999999 67999999999999998
Q ss_pred C-CCCeEEeeccCccccCCC----ccccccccccchhhccccC----------------------CCCCcchhHHHHHHH
Q 006903 483 N-NMEPCISEYGLIVTENHD----QSFLAQTSSLKINDISNQM----------------------CSTIKADVYGFGVIL 535 (626)
Q Consensus 483 ~-~~~~kl~DFGl~~~~~~~----~~~~~~~~~~~~pe~~~~~----------------------~~~~k~DVwSfGvvl 535 (626)
. ++.+||+|||+++..... .....+++.|++||..... .++.++|||||||++
T Consensus 290 ~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL 369 (566)
T PLN03225 290 EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIF 369 (566)
T ss_pred CCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHH
Confidence 6 578999999998643221 1234567789999954211 234567999999999
Q ss_pred HHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh---------hccHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 006903 536 LELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE---------AASEERMLKLLQVALRCINQSPNERPSMNQV 606 (626)
Q Consensus 536 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev 606 (626)
|||+++..+.+. +...+...+.........+....... ...+.......+|+.+|++.||++|||++|+
T Consensus 370 ~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~ 447 (566)
T PLN03225 370 LQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAA 447 (566)
T ss_pred HHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHH
Confidence 999998766442 22222222111111000000000000 0000011234589999999999999999999
Q ss_pred HHH
Q 006903 607 AVM 609 (626)
Q Consensus 607 ~~~ 609 (626)
++.
T Consensus 448 L~H 450 (566)
T PLN03225 448 LAH 450 (566)
T ss_pred hCC
Confidence 874
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-28 Score=226.66 Aligned_cols=245 Identities=14% Similarity=0.207 Sum_probs=186.4
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CCCccccceEEEeCC--eEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQ--EKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~--~~~lv~Ey~~~g~ 427 (626)
+.+|+|.|+.||.|. ..+.+.++||.++. ...+.+.+|+++|+.++ ||||+++++...+.. ...||+||+.+-+
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKP--VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~D 121 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKP--VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTD 121 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeech--HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhcccc
Confidence 679999999999998 67788999999975 44578999999999998 999999999887654 4679999999988
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCccccCCCccc--
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTENHDQSF-- 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~~~~~~~-- 504 (626)
...+. +.++-..+..++.++++||.|+| +.||+|||+||.|+++|. ....++.|+|+|.+......+
T Consensus 122 fk~ly------~tl~d~dIryY~~elLkALdyCH----S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnV 191 (338)
T KOG0668|consen 122 FKQLY------PTLTDYDIRYYIYELLKALDYCH----SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 191 (338)
T ss_pred HHHHh------hhhchhhHHHHHHHHHHHHhHHH----hcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeee
Confidence 77665 35777788899999999999999 799999999999999995 456899999999765443332
Q ss_pred cccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc---cc-------ccccccHHHH
Q 006903 505 LAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE---EW-------TVEVFDEVLI 573 (626)
Q Consensus 505 ~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~---~~-------~~~~~d~~~~ 573 (626)
...+.++.-||..- ...|+..-|+|||||++.+|+..+.||..|.+..+.+..+..- +. ..-.+|+...
T Consensus 192 RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~ 271 (338)
T KOG0668|consen 192 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFE 271 (338)
T ss_pred eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHh
Confidence 34456777788654 4567889999999999999999999998776544433222110 00 0001222211
Q ss_pred h---h------------hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 574 A---E------------AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 574 ~---~------------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. . ....-..++.++++.+.+..|-.+|||++|.+.
T Consensus 272 ~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 272 DILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred hHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 1 0 000011246889999999999999999999875
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=229.04 Aligned_cols=206 Identities=26% Similarity=0.432 Sum_probs=177.7
Q ss_pred cccCCCcceEEEEeCC-CcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 354 LGRGKHGSLYRVVLDD-GLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 354 lG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
||+|.+|.||++...+ ++.+++|.+...... .+.+.+|++.++.++|++|+++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999654 899999999865442 4679999999999999999999999999899999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCccccCCC---ccccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTENHD---QSFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~~~~---~~~~~ 506 (626)
++.... ..+++..+..++.++++++.||| +.+++|+||+|.||+++. ++.++++|||.+...... .....
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh----~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLH----SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIV 154 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhccc
Confidence 996321 46899999999999999999999 679999999999999999 899999999998654332 23344
Q ss_pred cccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
....|.+||..... ..+.+.|+|++|++++++ ..+
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------~~~ 190 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------PEL 190 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------HHH
Confidence 56678888887665 678899999999999999 247
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+++.+|++.+|++||++.++++.
T Consensus 191 ~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 191 KDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHhhCCcccCcCHHHHhhC
Confidence 788889999999999999999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=237.03 Aligned_cols=232 Identities=18% Similarity=0.289 Sum_probs=182.7
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCH----HHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS----EDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~----~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+||+|+|++|..++ .++.+.+|+|++++.-... .-.+.|-.+.... +||.+|.+..+|.++..++.|.||+++
T Consensus 256 ~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~g 335 (593)
T KOG0695|consen 256 RVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNG 335 (593)
T ss_pred eeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecC
Confidence 789999999999998 4568899999998654322 2345555555443 799999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc---CCCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE---NHDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~---~~~~ 502 (626)
|+|--++. ....++......+..+|..||.||| ++|||.||||.+|+|+|..|++|++|+|+++.. ....
T Consensus 336 gdlmfhmq---rqrklpeeharfys~ei~lal~flh----~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~t 408 (593)
T KOG0695|consen 336 GDLMFHMQ---RQRKLPEEHARFYSAEICLALNFLH----ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTT 408 (593)
T ss_pred cceeeehh---hhhcCcHHHhhhhhHHHHHHHHHHh----hcCeeeeeccccceEEccCCceeecccchhhcCCCCCccc
Confidence 99977764 3457899999999999999999999 789999999999999999999999999998752 3344
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCC------CCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQN------NGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
+..++++.|.+||+..+..|+..+|+|++||+++||+.|+.||+ ...+..+++..+.-+....
T Consensus 409 stfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir----------- 477 (593)
T KOG0695|consen 409 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR----------- 477 (593)
T ss_pred ccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc-----------
Confidence 66789999999999999999999999999999999999999996 1223333333332221110
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCC
Q 006903 577 ASEERMLKLLQVALRCINQSPNERP 601 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RP 601 (626)
.+.....+...+++.-+.+||.+|-
T Consensus 478 iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 478 IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ccceeehhhHHHHHHhhcCCcHHhc
Confidence 0111122345566778899999985
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-28 Score=265.46 Aligned_cols=240 Identities=24% Similarity=0.319 Sum_probs=180.3
Q ss_pred ccccccccCCCcc-eEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 349 APAELLGRGKHGS-LYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 349 ~~~~~lG~G~fG~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.+++|.|+-|+ ||+|.++ |+.||||++-.. ...-..+|++.|+.- +|||||++++.-.++.+.||..|.|..
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e--~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~- 587 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE--FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC- 587 (903)
T ss_pred ccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH--hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-
Confidence 4568899999984 7999985 789999998542 223457899998876 599999999988888999999999965
Q ss_pred ChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---C--CCeEEeeccCccccCC
Q 006903 427 SLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---N--MEPCISEYGLIVTENH 500 (626)
Q Consensus 427 ~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~--~~~kl~DFGl~~~~~~ 500 (626)
+|.+++... .......-...+.+..|++.||++|| +.+||||||||.||||+. + ..++|+|||+++....
T Consensus 588 sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH----sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 588 SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH----SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH----hcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 999999753 11111111345678899999999999 679999999999999986 2 5689999999876443
Q ss_pred Cc------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcC-CCCCCCCcchhHHHHHHhhcccccccccHHHH
Q 006903 501 DQ------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTG-KLVQNNGFNLATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 501 ~~------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
+. ....|+..|.|||+......+.++||+|+|||+|..++| +.||.+... ... .+.........+.
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~-NIl~~~~~L~~L~---- 736 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQA-NILTGNYTLVHLE---- 736 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH--hhh-hhhcCccceeeec----
Confidence 32 345688899999999888888899999999999999996 788864321 111 1122221111111
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+++ ...+||.++++++|..||++.+|+.
T Consensus 737 ---~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 737 ---PLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ---cCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 11112 5778999999999999999999864
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=253.00 Aligned_cols=189 Identities=22% Similarity=0.307 Sum_probs=163.5
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC----HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS----SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||-|+||+|..+. .++...+|.|.+++.+.- ...++.|-.+|..-..+-||+|+-.|.+++.+|+||||++||
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGG 714 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG 714 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCc
Confidence 469999999999987 666788999999887632 235788999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc---------
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT--------- 497 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~--------- 497 (626)
++-.+|-. ...|.+.....++.++..|+++.| ..|+|||||||+|||||.+|++||+||||+.-
T Consensus 715 DmMSLLIr---mgIFeE~LARFYIAEltcAiesVH----kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY 787 (1034)
T KOG0608|consen 715 DMMSLLIR---MGIFEEDLARFYIAELTCAIESVH----KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 787 (1034)
T ss_pred cHHHHHHH---hccCHHHHHHHHHHHHHHHHHHHH----hccceecccCccceEEccCCceeeeeccccccceecccccc
Confidence 99999853 356888888889999999999999 78999999999999999999999999999531
Q ss_pred cC---CC---------------------------------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcC
Q 006903 498 EN---HD---------------------------------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTG 541 (626)
Q Consensus 498 ~~---~~---------------------------------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg 541 (626)
.. +. .....|++.|++||++....++.-+|+||.|||||||+.|
T Consensus 788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g 867 (1034)
T KOG0608|consen 788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVG 867 (1034)
T ss_pred ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhC
Confidence 00 00 0123578899999999999999999999999999999999
Q ss_pred CCCCCC
Q 006903 542 KLVQNN 547 (626)
Q Consensus 542 ~~p~~~ 547 (626)
+.||-.
T Consensus 868 ~~pf~~ 873 (1034)
T KOG0608|consen 868 QPPFLA 873 (1034)
T ss_pred CCCccC
Confidence 999864
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-29 Score=235.12 Aligned_cols=254 Identities=19% Similarity=0.261 Sum_probs=187.1
Q ss_pred ccccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeC-----CeEEEE
Q 006903 349 APAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK-----QEKLLV 419 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lv 419 (626)
.|...||-|+||.||.+.. ++|+.||.|++.... ...+.+.+|+++|...+|.|++..++..... .+.|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 4568899999999999884 579999999986543 3457889999999999999999999976543 356889
Q ss_pred EeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 420 YEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 420 ~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
+|.|.. +|.+++- ..+.++-..+.-+..||++||.||| +.+|.||||||.|.|++.+...||+|||+++..+
T Consensus 136 TELmQS-DLHKIIV---SPQ~Ls~DHvKVFlYQILRGLKYLH----sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 136 TELMQS-DLHKIIV---SPQALTPDHVKVFVYQILRGLKYLH----TANILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHh-hhhheec---cCCCCCcchhhhhHHHHHhhhHHHh----hcchhhccCCCccEEeccCceEEecccccccccc
Confidence 999964 8888874 3467888889999999999999999 6799999999999999999999999999998765
Q ss_pred CCccc----cccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--HHHHhhccc---------
Q 006903 500 HDQSF----LAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW--VHSVVREEW--------- 563 (626)
Q Consensus 500 ~~~~~----~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~--------- 563 (626)
.+... -..+.+|.+||+.. ...|+.+.||||.||++.||+-++..|.....+.+. +........
T Consensus 208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 54432 23478899999865 456899999999999999999998877643332221 111111110
Q ss_pred --ccccccH--------HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 564 --TVEVFDE--------VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 564 --~~~~~d~--------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
...++.. ++..-......-.....+..+++..||++|.+.++.+..+
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 0000000 0000000011112345666788999999999998887654
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-27 Score=223.58 Aligned_cols=257 Identities=17% Similarity=0.296 Sum_probs=190.3
Q ss_pred ccccccchhhhhcccccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceE-EEe
Q 006903 336 SKVNKLKFEDLLRAPAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAY-YCS 412 (626)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~-~~~ 412 (626)
.+..+++++|... ..+.+|+|.||.+..++++ ..+.+++|.+........+|.+|..---.+ .|.||+.-++. |.+
T Consensus 15 ~el~kv~l~d~y~-I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt 93 (378)
T KOG1345|consen 15 EELKKVDLEDVYT-INKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQT 93 (378)
T ss_pred ccccccchhhhhh-HHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhc
Confidence 3456667766543 3578999999999999854 578899999998888889999998865445 58999998864 777
Q ss_pred CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC--CCCCeEEe
Q 006903 413 KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN--NNMEPCIS 490 (626)
Q Consensus 413 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~--~~~~~kl~ 490 (626)
.+.++.++||+|.|+|..-+.. ..+-+....+++.|++.|+.|+| +.++||||||.+|||+- +..++|+|
T Consensus 94 ~d~YvF~qE~aP~gdL~snv~~----~GigE~~~K~v~~ql~SAi~fMH----sknlVHRdlK~eNiLif~~df~rvKlc 165 (378)
T KOG1345|consen 94 SDAYVFVQEFAPRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEFMH----SKNLVHRDLKAENILIFDADFYRVKLC 165 (378)
T ss_pred CceEEEeeccCccchhhhhcCc----ccccHHHHHHHHHHHHHHHHHhh----ccchhhcccccceEEEecCCccEEEee
Confidence 8889999999999999988853 34667788999999999999999 78999999999999994 34579999
Q ss_pred eccCccccCCCccccccccccchhhccccC-----CCCCcchhHHHHHHHHHHHcCCCCCCC----CcchhHHHHHHhhc
Q 006903 491 EYGLIVTENHDQSFLAQTSSLKINDISNQM-----CSTIKADVYGFGVILLELLTGKLVQNN----GFNLATWVHSVVRE 561 (626)
Q Consensus 491 DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~-----~~~~k~DVwSfGvvl~elltg~~p~~~----~~~~~~~~~~~~~~ 561 (626)
|||+.+..+...........|.+||..... ...+.+|||.|||++|.++||+.||.. +....+|..-..+.
T Consensus 166 DFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk 245 (378)
T KOG1345|consen 166 DFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRK 245 (378)
T ss_pred ecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhccc
Confidence 999987655444444445567777654322 235678999999999999999999872 23344444332221
Q ss_pred cc-ccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 562 EW-TVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 562 ~~-~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
.. ..+.+. .. ..+++++..+-+..+|++|--..++.++-.
T Consensus 246 ~~~~P~~F~------~f----s~~a~r~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 246 NPALPKKFN------PF----SEKALRLFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred CccCchhhc------cc----CHHHHHHHHHhcCCcccccchhHHHHHHHH
Confidence 10 111111 12 234667777899999999976666665543
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-27 Score=229.35 Aligned_cols=246 Identities=19% Similarity=0.257 Sum_probs=185.9
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEEe
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVYE 421 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~E 421 (626)
..+|.|.- .|-.+. .-.++.||+|++.... ...+...+|...+..++|+||++++.+|.-. .+.|+|||
T Consensus 23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e 101 (369)
T KOG0665|consen 23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVME 101 (369)
T ss_pred cccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHH
Confidence 45666666 444443 2247899999886543 3446788999999999999999999988643 35799999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
||. ++|.+.+. ..++-.....+..|++.|+.||| +.||+||||||+||++..+...||.|||+++....+
T Consensus 102 ~m~-~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lh----s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 102 LMD-ANLCQVIL-----MELDHETISYILYQMLCGIKHLH----SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred hhh-hHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHH----hcceeecccCcccceecchhheeeccchhhcccCcc
Confidence 995 58888875 23566778899999999999999 789999999999999999999999999999875443
Q ss_pred --ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccc-----------
Q 006903 502 --QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF----------- 568 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------- 568 (626)
.+.+..+.+|.+||++.+..+.+.+||||.||++.||++|+..|.+...+.+|.+....-+...+-+
T Consensus 172 ~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~y 251 (369)
T KOG0665|consen 172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNY 251 (369)
T ss_pred cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHH
Confidence 2445678899999999888899999999999999999999998887777777755432211110000
Q ss_pred -----------------cHHHHh-hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 569 -----------------DEVLIA-EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 569 -----------------d~~~~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
|..... ...++-....+.+++.++|..+|++|.++++++.
T Consensus 252 v~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 252 VENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred hhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 000000 0001112334778899999999999999999976
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=233.82 Aligned_cols=127 Identities=21% Similarity=0.318 Sum_probs=109.7
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-----C---CCccccceEEEeC----CeEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-----H---PNVLPPLAYYCSK----QEKL 417 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-----H---~nIv~l~g~~~~~----~~~~ 417 (626)
...||-|.|++||.|. ..+.+.||+|+.+......+....||++|++++ | ..||+|+++|... .+.+
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVC 162 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVC 162 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEE
Confidence 4689999999999999 567889999999887777788899999998884 3 4799999998753 4789
Q ss_pred EEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC
Q 006903 418 LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN 482 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~ 482 (626)
+|+|++ |-+|..++... ..+.++...+.+|+.||+.||.|||+.| ||||-||||+|||+-
T Consensus 163 MVfEvL-GdnLLklI~~s-~YrGlpl~~VK~I~~qvL~GLdYLH~ec---gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 163 MVFEVL-GDNLLKLIKYS-NYRGLPLSCVKEICRQVLTGLDYLHREC---GIIHTDLKPENVLLC 222 (590)
T ss_pred EEehhh-hhHHHHHHHHh-CCCCCcHHHHHHHHHHHHHHHHHHHHhc---CccccCCCcceeeee
Confidence 999999 56888888653 4567899999999999999999999865 899999999999983
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-26 Score=222.62 Aligned_cols=191 Identities=25% Similarity=0.356 Sum_probs=164.5
Q ss_pred ccccccCCCcceEEEEeCC-CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDD-GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|++|.||++...+ ++.+|+|.+..... ..+.+.+|++.+++++|+|++++++++...+..++++||+++++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 83 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGD 83 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCC
Confidence 4679999999999999764 89999999986553 35688999999999999999999999998899999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----c
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----S 503 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~ 503 (626)
|.+++.... ..+++.....++.+++.++.||| ..+++|+|++|+||+++.++.++++|||.+....... .
T Consensus 84 L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 84 LFDYLRKKG--GKLSEEEARFYLRQILEALEYLH----SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred HHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 999996422 12889999999999999999999 5699999999999999999999999999976543322 3
Q ss_pred ccccccccchhhcc-ccCCCCCcchhHHHHHHHHHHHcCCCCCCC
Q 006903 504 FLAQTSSLKINDIS-NQMCSTIKADVYGFGVILLELLTGKLVQNN 547 (626)
Q Consensus 504 ~~~~~~~~~~pe~~-~~~~~~~k~DVwSfGvvl~elltg~~p~~~ 547 (626)
...+...|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 34456678999987 555667799999999999999999999965
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-27 Score=250.08 Aligned_cols=242 Identities=15% Similarity=0.225 Sum_probs=190.0
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
..+|.|.||.|||++ ..+++..|+|.++-.. ..-.-...|+-+++..+|||||.++|-|...+..|+.||||.+|+|+
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQ 100 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQ 100 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCccc
Confidence 679999999999999 5679999999998654 33355778999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~~~ 506 (626)
+.-+. ..+++..++-.++++..+||.||| +.+-+|||||-.|||+++.+.+|++|||.+..... ......
T Consensus 101 diy~~---TgplselqiayvcRetl~gl~ylh----s~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krksfi 173 (829)
T KOG0576|consen 101 DIYHV---TGPLSELQIAYVCRETLQGLKYLH----SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFI 173 (829)
T ss_pred ceeee---cccchhHHHHHHHhhhhccchhhh----cCCcccccccccceeecccCceeecccCchhhhhhhhhhhhccc
Confidence 98863 357888899999999999999999 78899999999999999999999999998654322 123356
Q ss_pred cccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 507 QTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 507 ~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
|+++||+||+.. ...|..++|||+.|++..|+-.-++|..+-..+...+-...........-| ......
T Consensus 174 GtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkD--------k~kws~ 245 (829)
T KOG0576|consen 174 GTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKD--------KTKWSE 245 (829)
T ss_pred CCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccC--------CccchH
Confidence 899999999753 446789999999999999998887775433222222111111111111111 122344
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+-++++.|+..+|++||+++.+++
T Consensus 246 ~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 246 FFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHHHHHHhcCCCccCCChhhhee
Confidence 5788899999999999999987654
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.4e-27 Score=240.97 Aligned_cols=190 Identities=16% Similarity=0.242 Sum_probs=162.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCH---------HHHHHHHHHhccCC---CCCccccceEEEeCCeEE
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISS---------EDFKNRMQKIDHVK---HPNVLPPLAYYCSKQEKL 417 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~---------~~~~~ei~~l~~l~---H~nIv~l~g~~~~~~~~~ 417 (626)
-+.+|+|+||.|+.|.++ +...|+||.+.+...-. -.+-.||++|..++ |+||++++++|++++.+|
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yy 645 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYY 645 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeE
Confidence 467999999999999854 56789999887654211 12557999999997 999999999999999999
Q ss_pred EEEeec-CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 418 LVYEYQ-PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 418 lv~Ey~-~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
|+||-. ++-+|++++. ..+.+++.+..-|..||+.|+++|| +.||||||||-+|+.++.+|-+|+.|||.+.
T Consensus 646 l~te~hg~gIDLFd~IE---~kp~m~E~eAk~IFkQV~agi~hlh----~~~ivhrdikdenvivd~~g~~klidfgsaa 718 (772)
T KOG1152|consen 646 LETEVHGEGIDLFDFIE---FKPRMDEPEAKLIFKQVVAGIKHLH----DQGIVHRDIKDENVIVDSNGFVKLIDFGSAA 718 (772)
T ss_pred EEecCCCCCcchhhhhh---ccCccchHHHHHHHHHHHhcccccc----ccCceecccccccEEEecCCeEEEeeccchh
Confidence 999975 4668999994 4467899999999999999999999 7899999999999999999999999999875
Q ss_pred ccC-CCccccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCC
Q 006903 497 TEN-HDQSFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNN 547 (626)
Q Consensus 497 ~~~-~~~~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~ 547 (626)
... ..-....||..|+|||+.++..| +..-|||++||+||.++....|+++
T Consensus 719 ~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 719 YTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 433 23345678999999999987766 6778999999999999999988763
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-27 Score=239.33 Aligned_cols=192 Identities=18% Similarity=0.228 Sum_probs=163.6
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC------CCCccccceEEEeCCeEEEEEeecC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK------HPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~------H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
...|+|-|++|.+|.. ..|..||||+++....-.+.=++|+++|++|+ --|+++|+..|...+++|||+|-+.
T Consensus 438 ~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls 517 (752)
T KOG0670|consen 438 GYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS 517 (752)
T ss_pred eccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh
Confidence 4689999999999984 45889999999987666667789999999995 3588999999999999999999874
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCccccCCC-c
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTENHD-Q 502 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~~~~-~ 502 (626)
-+|.++|........|....+..++.|+..||..|- ..||+|.||||.|||+++.. ..||||||.|...... .
T Consensus 518 -lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK----~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei 592 (752)
T KOG0670|consen 518 -LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK----KCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEI 592 (752)
T ss_pred -chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH----hcCeeecccCccceEeccCcceeeeccCccccccccccc
Confidence 599999986555567888899999999999999998 57999999999999999764 4699999998765433 2
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCC
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNG 548 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~ 548 (626)
+.+-....|.+||++.+..|+...|+||.||+||||.||+..|.+.
T Consensus 593 tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 593 TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 3334456799999999999999999999999999999999888643
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.5e-26 Score=263.11 Aligned_cols=192 Identities=20% Similarity=0.197 Sum_probs=138.6
Q ss_pred ccCCC-CCccccceEE-------EeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCC
Q 006903 396 DHVKH-PNVLPPLAYY-------CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED 467 (626)
Q Consensus 396 ~~l~H-~nIv~l~g~~-------~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~ 467 (626)
+.++| +||++++++| ......+.++||+ +++|.++|.. ....+++.+++.++.||++||.||| ++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH----~~ 99 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAH----SQ 99 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHH----hC
Confidence 34556 6888888887 2334567889988 5699999963 2356999999999999999999999 68
Q ss_pred CceeccCCCCCeeeCC-------------------CCCeEEeeccCccccCCC-------------------cccccccc
Q 006903 468 GIAHGNLKSNNILFNN-------------------NMEPCISEYGLIVTENHD-------------------QSFLAQTS 509 (626)
Q Consensus 468 ~ivHrDlkp~NILl~~-------------------~~~~kl~DFGl~~~~~~~-------------------~~~~~~~~ 509 (626)
|||||||||+||||+. ++.+|++|||+++..... .....+++
T Consensus 100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 179 (793)
T PLN00181 100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS 179 (793)
T ss_pred CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence 9999999999999954 455677777776532100 01123577
Q ss_pred ccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHH
Q 006903 510 SLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVA 589 (626)
Q Consensus 510 ~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~ 589 (626)
+|++||......++.++|||||||+||||++|..|+..... ........ ...+.. ........+++
T Consensus 180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~-----~~~~~~------~~~~~~~~~~~ 245 (793)
T PLN00181 180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHR-----VLPPQI------LLNWPKEASFC 245 (793)
T ss_pred ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHh-----hcChhh------hhcCHHHHHHH
Confidence 89999998888889999999999999999999887643211 11111110 011110 01123356778
Q ss_pred hhccCCCCCCCCCHHHHHH
Q 006903 590 LRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 590 ~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+||+.+|.+||+|.|+++
T Consensus 246 ~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 246 LWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHhCCCChhhCcChHHHhh
Confidence 8999999999999999976
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-24 Score=203.96 Aligned_cols=170 Identities=21% Similarity=0.215 Sum_probs=128.8
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|.++++. .+..++|..+..++.|++.||.|||+ .+ ||+|||++.++.+|+ ||++........
T Consensus 1 GsL~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~lH~----~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~-- 64 (176)
T smart00750 1 VSLADILEV--RGRPLNEEEIWAVCLQCLRALRELHR----QA------KSGNILLTWDGLLKL--DGSVAFKTPEQS-- 64 (176)
T ss_pred CcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHh----cC------CcccEeEcCccceee--ccceEeeccccC--
Confidence 789999963 24569999999999999999999994 44 999999999999999 999876443322
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH--H
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM--L 583 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~ 583 (626)
.++..|++||......++.++|||||||++|||+||+.||.......................+. ....... .
T Consensus 65 ~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 139 (176)
T smart00750 65 RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDR-----SNLESVSAAR 139 (176)
T ss_pred CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcccc-----ccHHHHHhhh
Confidence 46789999999988889999999999999999999999987554444433333322111100000 0011111 2
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+.+++.+||+.+|++||++.|+++.+..+..+
T Consensus 140 ~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 140 SFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred hHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 588999999999999999999999998876543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-24 Score=215.36 Aligned_cols=248 Identities=20% Similarity=0.281 Sum_probs=183.1
Q ss_pred cccccccCCCcceEEEEeC----CCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecC
Q 006903 350 PAELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
..+.||+|.|++||++... ..+.||+|.+... .....+.+|+++|..+. |.||+++.+++..++...+|+||++
T Consensus 40 ~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~ 118 (418)
T KOG1167|consen 40 VVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFE 118 (418)
T ss_pred hhccccccchhhhhhhhHhhhccccceEeeeecccc-cCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccC
Confidence 3578999999999999843 4678999998764 34567999999999885 8999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCccc-c----
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVT-E---- 498 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~-~---- 498 (626)
.-.-.+++. .++...+..+...+..||.++| .+|||||||||+|+|.+. .+.-.|.|||++.. .
T Consensus 119 H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h----~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~ 188 (418)
T KOG1167|consen 119 HDRFRDLYR------SLSLAEIRWYLRNLLKALAHLH----KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ 188 (418)
T ss_pred ccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhh----ccCccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence 999988885 3678889999999999999999 789999999999999985 45568999999751 0
Q ss_pred -----C-----CCc--------------------------------cccccccccchhhccccC-CCCCcchhHHHHHHH
Q 006903 499 -----N-----HDQ--------------------------------SFLAQTSSLKINDISNQM-CSTIKADVYGFGVIL 535 (626)
Q Consensus 499 -----~-----~~~--------------------------------~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl 535 (626)
. ... ...+||+.|.+||+.... ..++++||||-|||+
T Consensus 189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~ 268 (418)
T KOG1167|consen 189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL 268 (418)
T ss_pred hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence 0 000 012467888899976543 458899999999999
Q ss_pred HHHHcCCCCCCCCcc----hhHHHHHHhh---------ccc--cc---------------cccc-HHHHh--------hh
Q 006903 536 LELLTGKLVQNNGFN----LATWVHSVVR---------EEW--TV---------------EVFD-EVLIA--------EA 576 (626)
Q Consensus 536 ~elltg~~p~~~~~~----~~~~~~~~~~---------~~~--~~---------------~~~d-~~~~~--------~~ 576 (626)
+-+++++.||....+ +.+.+...-. .+. .. +.++ +.... ..
T Consensus 269 Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~ 348 (418)
T KOG1167|consen 269 LSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREI 348 (418)
T ss_pred ehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecc
Confidence 999999999863222 2222111000 000 00 0000 00000 00
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.....+++++.+|++.||.+|.|++|.++
T Consensus 349 ~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 349 GSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 11112336889999999999999999999876
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-23 Score=195.41 Aligned_cols=244 Identities=21% Similarity=0.337 Sum_probs=182.6
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
..|.+...|..|+|++. |..+++|++..... ...+|..|.-.|+-+.||||+.++|.|..+....++..|||.|+|
T Consensus 196 tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 56888889999999987 44566787765542 346899999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEe--eccCccccCCCccccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCIS--EYGLIVTENHDQSFLA 506 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~--DFGl~~~~~~~~~~~~ 506 (626)
+..|++. .....+-.+..+++.++|+|++|||+. ++-|..--|.+..+++|++.+++|+ |--++. +.. ...
T Consensus 275 ynvlhe~-t~vvvd~sqav~faldiargmaflhsl--ep~ipr~~lns~hvmidedltarismad~kfsf---qe~-gr~ 347 (448)
T KOG0195|consen 275 YNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSL--EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF---QEV-GRA 347 (448)
T ss_pred HHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhc--chhhhhhhcccceEEecchhhhheecccceeee---ecc-ccc
Confidence 9999863 334577789999999999999999974 4556666789999999999998875 321111 111 112
Q ss_pred cccccchhhccccCCC---CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 507 QTSSLKINDISNQMCS---TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~---~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
..+.|++||.....+. -..+|+|||.+++|||.|+..||.+-..+.--++ +.-+..... .++....
T Consensus 348 y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk-ialeglrv~----------ippgis~ 416 (448)
T KOG0195|consen 348 YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK-IALEGLRVH----------IPPGISR 416 (448)
T ss_pred cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh-hhhcccccc----------CCCCccH
Confidence 3567888998766544 3479999999999999999999974332211111 111111111 1222233
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
.+.+++.-|+..||.+||.+..|+-.|+++.
T Consensus 417 hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 417 HMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 4778888999999999999999999998764
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=233.25 Aligned_cols=185 Identities=28% Similarity=0.504 Sum_probs=127.6
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCcccEEecCCCCeEEEEEecCCCceeccCccccCCCCCc
Q 006903 21 KSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSL 100 (626)
Q Consensus 21 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~c~~~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L 100 (626)
..+..++|..||++||+.+.. +. ..+.+|+...|+| .|.||+|++. ++|+.|+|++|+++|.+++ .+..+++|
T Consensus 23 ~~~~~~~~~~~l~~~~~~~~~--~~-~~~~~w~~~~~~c--~w~gv~c~~~-~~v~~L~L~~~~i~~~~~~-~~~~l~~L 95 (968)
T PLN00113 23 FSMLHAEELELLLSFKSSIND--PL-KYLSNWNSSADVC--LWQGITCNNS-SRVVSIDLSGKNISGKISS-AIFRLPYI 95 (968)
T ss_pred ccCCCHHHHHHHHHHHHhCCC--Cc-ccCCCCCCCCCCC--cCcceecCCC-CcEEEEEecCCCccccCCh-HHhCCCCC
Confidence 344467889999999999852 22 3467898778899 6999999863 5899999999999998864 67888889
Q ss_pred cEEEcccCCCcccCCcccc-CCCCCcEEEeecccccccc----------------------ChhhhcCCCCCeEEccCCc
Q 006903 101 VVLSLEENNIAGTVSQEIS-NCKQLTHLYVGRNKLSGNL----------------------PDSLSKLNNLKRLDISNNN 157 (626)
Q Consensus 101 ~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~i----------------------p~~~~~l~~L~~L~ls~N~ 157 (626)
+.|+|++|+++|.+|..+. .+++|++|+|++|+++|.+ |..++++++|++|||++|.
T Consensus 96 ~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~ 175 (968)
T PLN00113 96 QTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV 175 (968)
T ss_pred CEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCc
Confidence 9999999999888887655 6667777766666666544 4445555555555555555
Q ss_pred CCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCC
Q 006903 158 FSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 158 l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
+++.+|. +.++++|++|++++|+++|.+|.. .+++|+.|++++|+++|.+|..++
T Consensus 176 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 233 (968)
T PLN00113 176 LVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIG 233 (968)
T ss_pred ccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHh
Confidence 5555554 555555555555555555555542 355566666666666666665443
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-21 Score=201.94 Aligned_cols=131 Identities=20% Similarity=0.227 Sum_probs=105.3
Q ss_pred ccccccCCCcceEEEEeC--CCcEEEEEEcCCCC------CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD--DGLMLAVKRLRDWS------ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~--~g~~vAvK~l~~~~------~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||+||+|... +++.||||++.... ...+.|.+|+++|++++|+|++..+.. .+..++||||
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~LVmE~ 99 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGLVRGW 99 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEEEEEc
Confidence 478999999999999854 57888999875331 123568999999999999999863322 2468999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccC-CCCCeeeCCCCCeEEeeccCcccc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNL-KSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDl-kp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
+++++|... . .. . ...++.++++||.||| ++||+|||| ||+|||++.++.+||+|||+++..
T Consensus 100 ~~G~~L~~~-~--~~-~------~~~~~~~i~~aL~~lH----~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 100 TEGVPLHLA-R--PH-G------DPAWFRSAHRALRDLH----RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred cCCCCHHHh-C--cc-c------hHHHHHHHHHHHHHHH----HCCCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 999999732 1 11 1 1467889999999999 689999999 999999999999999999998743
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.8e-21 Score=182.77 Aligned_cols=138 Identities=13% Similarity=0.202 Sum_probs=108.1
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCC---C-------HHH-----------------HHHHHHHhccCCCCCcc
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---S-------SED-----------------FKNRMQKIDHVKHPNVL 404 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---~-------~~~-----------------~~~ei~~l~~l~H~nIv 404 (626)
..||+|+||.||+|...+|+.||||+++.... . ... ...|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 57999999999999987999999999975421 1 011 23499999999888875
Q ss_pred ccceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC
Q 006903 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN 484 (626)
Q Consensus 405 ~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~ 484 (626)
....+.. ...++||||++++++..... ....++......++.|++.+|.|+|+ ..||+||||||+|||++ +
T Consensus 83 ~p~~~~~--~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~-~ 153 (190)
T cd05147 83 CPEPILL--KSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH-D 153 (190)
T ss_pred CCcEEEe--cCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-C
Confidence 5444322 23489999999887765432 12468889999999999999999953 56999999999999998 4
Q ss_pred CCeEEeeccCcccc
Q 006903 485 MEPCISEYGLIVTE 498 (626)
Q Consensus 485 ~~~kl~DFGl~~~~ 498 (626)
+.++++|||++...
T Consensus 154 ~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 GKLYIIDVSQSVEH 167 (190)
T ss_pred CcEEEEEccccccC
Confidence 78999999998643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=186.44 Aligned_cols=248 Identities=21% Similarity=0.269 Sum_probs=187.5
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCC-CccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHP-NVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~-nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||.|+||.||++... ..+|+|.+..... ..+.+.+|+..++.+.|+ +|+++.+++......++++||+.+
T Consensus 5 ~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 82 (384)
T COG0515 5 LRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDG 82 (384)
T ss_pred EEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCC
Confidence 367899999999999976 7899999876542 256799999999999988 799999999777778999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCccccCCC---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTENHD--- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~~~~--- 501 (626)
+++.+++........+.......+..+++.++.|+| ..+++|||+||+||+++... .++++|||.+......
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H----~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 83 GSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH----SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999977753211126888899999999999999999 67899999999999999988 6999999998643221
Q ss_pred ------ccccccccccchhhcccc---CCCCCcchhHHHHHHHHHHHcCCCCCCCCcc---hhHHHHHHhhcccc--ccc
Q 006903 502 ------QSFLAQTSSLKINDISNQ---MCSTIKADVYGFGVILLELLTGKLVQNNGFN---LATWVHSVVREEWT--VEV 567 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~---~~~~~k~DVwSfGvvl~elltg~~p~~~~~~---~~~~~~~~~~~~~~--~~~ 567 (626)
.....++..|++||.... ..+....|+||+|++++++++|..|+..... .............. ...
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence 234567888999998876 5678899999999999999999999764432 12222222111111 000
Q ss_pred ccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 568 FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 568 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.... ........+.+++..|+..+|..|.++.+....
T Consensus 239 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 239 LSPS-----NPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cCcc-----ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0000 001112357788889999999999998877654
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=188.55 Aligned_cols=250 Identities=16% Similarity=0.173 Sum_probs=181.7
Q ss_pred ccccccCCCcceEEEEeCC--CcEEEEEEcCCCC-CCHHHHHHHHHHhccCCC----CCccccceEE-EeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLDD--GLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKH----PNVLPPLAYY-CSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~--g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H----~nIv~l~g~~-~~~~~~~lv~Ey 422 (626)
...||+|+||.||.+.... ...+|+|...... .....+..|+.++..+.+ +++..+++.. ..+...++||+.
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l 102 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSL 102 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEec
Confidence 4789999999999999544 3578888876543 222378888888888763 5788888877 477788999998
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC-----CCeEEeeccCcc-
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN-----MEPCISEYGLIV- 496 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-----~~~kl~DFGl~~- 496 (626)
+ |.+|.++..... ...++....++|+.|+..+|.++| +.|++||||||+|+++... ..+.+.|||+++
T Consensus 103 ~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH----~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 103 L-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLH----SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred c-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHH----hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 7 679999885433 467999999999999999999999 7899999999999999865 458999999997
Q ss_pred -ccC-CC----------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhH--HHHHHhhcc
Q 006903 497 -TEN-HD----------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLAT--WVHSVVREE 562 (626)
Q Consensus 497 -~~~-~~----------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~--~~~~~~~~~ 562 (626)
... .. .....||..|+++........+.+.|+||++.++.|+..|..||........ .+.......
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~ 256 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKL 256 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhh
Confidence 211 10 1123477788888877777788999999999999999999999864332211 111111111
Q ss_pred cccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 563 WTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 563 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.... .....+. .+.++...+-..+..++|....+...++.....
T Consensus 257 ~~~~-------~~~~~~~---~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 257 LTDR-------FGDLKPE---EFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred cccc-------ccCCChH---HHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 1000 0011222 344444455558999999999999998877554
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-20 Score=198.55 Aligned_cols=212 Identities=22% Similarity=0.309 Sum_probs=159.7
Q ss_pred hccCCCCCccccceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccC
Q 006903 395 IDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNL 474 (626)
Q Consensus 395 l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDl 474 (626)
|+.+.|.|+.+++|.+.+....+.|.+||..|+|.+.+.. ....++|.-...+..+|+.||+|+|+ ++-..|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHN---SPIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhc---Ccceeeeee
Confidence 4678899999999999999999999999999999999974 45679999999999999999999995 343499999
Q ss_pred CCCCeeeCCCCCeEEeeccCccccCC-----CccccccccccchhhccccC-------CCCCcchhHHHHHHHHHHHcCC
Q 006903 475 KSNNILFNNNMEPCISEYGLIVTENH-----DQSFLAQTSSLKINDISNQM-------CSTIKADVYGFGVILLELLTGK 542 (626)
Q Consensus 475 kp~NILl~~~~~~kl~DFGl~~~~~~-----~~~~~~~~~~~~~pe~~~~~-------~~~~k~DVwSfGvvl~elltg~ 542 (626)
+++|+++|..+.+|++|||+...... .........-|.+||..... ..+.++||||||++++|+++++
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 99999999999999999999654321 11111223346788876543 1367899999999999999999
Q ss_pred CCCCCCcch---hHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 543 LVQNNGFNL---ATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 543 ~p~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.||...... .+.+..+... ....+.+.+.... +....+..++..||..+|++||++++|-..++.+...
T Consensus 156 ~~~~~~~~~~~~~eii~~~~~~--~~~~~rP~i~~~~---e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRVKKG--GSNPFRPSIELLN---ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred CccccccccCChHHHHHHHHhc--CCCCcCcchhhhh---hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 999743222 2233332221 1112222222111 3333688999999999999999999999998887653
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-21 Score=212.25 Aligned_cols=256 Identities=18% Similarity=0.180 Sum_probs=181.1
Q ss_pred hhcccccccccCCCcceEEEE-eCCCcEEEEEEcCC---CCCCH----HHHHHHHHHhccCCCCCccccceEEEeCCeEE
Q 006903 346 LLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRD---WSISS----EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKL 417 (626)
Q Consensus 346 l~~~~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~---~~~~~----~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~ 417 (626)
....+..++|.|++|.|+... ......++.|..+. ..... ..+..|+.+-..++|||++..+..+.+.....
T Consensus 318 ~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~ 397 (601)
T KOG0590|consen 318 KYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGIL 397 (601)
T ss_pred ccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccch
Confidence 334467899999999888776 33444455554431 11111 12566777788899999999888877776666
Q ss_pred EEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 418 LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
-+||||++ +|+.++... ..+...++..+..|+..|+.|+| +.||.|||+|++|+++..++.+||+|||.+..
T Consensus 398 ~~mE~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h----~~GiahrdlK~enll~~~~g~lki~Dfg~~~v 469 (601)
T KOG0590|consen 398 QSMEYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLH----SMGLAHRDLKLENLLVTENGILKIIDFGAASV 469 (601)
T ss_pred hhhhcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHH----hcCceeccCccccEEEecCCceEEeecCccee
Confidence 66999999 999999532 35777888899999999999999 78999999999999999999999999998643
Q ss_pred cC-------CCccccccccccchhhccccCCCC-CcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 498 EN-------HDQSFLAQTSSLKINDISNQMCST-IKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 498 ~~-------~~~~~~~~~~~~~~pe~~~~~~~~-~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
.. .......+...|.|||+.....|. ...||||.||++..|++|+.||.................+......
T Consensus 470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~ 549 (601)
T KOG0590|consen 470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEG 549 (601)
T ss_pred eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccC
Confidence 21 112345677788899998777664 4689999999999999999998632211111011111111111111
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhh
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNI 613 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i 613 (626)
+. ......+.....++.++++.||.+|-|+++|++ +++.|
T Consensus 550 ~~----~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 550 PN----RLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred hH----HHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 10 111223445678889999999999999999986 44444
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.1e-20 Score=177.36 Aligned_cols=138 Identities=20% Similarity=0.292 Sum_probs=110.0
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---------------------------HHHHHHHHHHhccCCCCCcc
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---------------------------SEDFKNRMQKIDHVKHPNVL 404 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---------------------------~~~~~~ei~~l~~l~H~nIv 404 (626)
..||+|+||.||+|...+|+.||||+++..... ...+.+|.+.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 579999999999999778999999998754211 11235788999999999986
Q ss_pred ccceEEEeCCeEEEEEeecCCCChhHh-hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC
Q 006903 405 PPLAYYCSKQEKLLVYEYQPNGSLFNL-LHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN 483 (626)
Q Consensus 405 ~l~g~~~~~~~~~lv~Ey~~~g~L~~~-l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~ 483 (626)
....+... ..++||||++++++... +. ...++......++.+++.++.++|+ ..||+||||||+||+++
T Consensus 83 ~p~~~~~~--~~~lVmE~~~g~~~~~~~l~----~~~~~~~~~~~i~~~l~~~l~~lH~---~~givHrDlkP~NIll~- 152 (190)
T cd05145 83 VPEPILLK--KNVLVMEFIGDDGSPAPRLK----DVPLEEEEAEELYEQVVEQMRRLYQ---EAGLVHGDLSEYNILYH- 152 (190)
T ss_pred CceEEEec--CCEEEEEEecCCCchhhhhh----hccCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCChhhEEEE-
Confidence 65555433 34899999998855433 32 1356778889999999999999994 27999999999999999
Q ss_pred CCCeEEeeccCccccC
Q 006903 484 NMEPCISEYGLIVTEN 499 (626)
Q Consensus 484 ~~~~kl~DFGl~~~~~ 499 (626)
++.++++|||++....
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 7899999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-19 Score=203.71 Aligned_cols=133 Identities=27% Similarity=0.538 Sum_probs=96.7
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCC---CcccEEecCCC----CeEEEEEecCCCceeccCccccCC
Q 006903 24 VEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSG---KWVGVTCDSRQ----KSVRKIVLDGFNLSGILDTTSVCK 96 (626)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~c~~---~w~gv~c~~~~----~~v~~l~L~~~~l~g~~~~~~~~~ 96 (626)
+.++|..||+.+|..+.. + ...+|+ +|+|.+ .|.||.|.... ..|+.|+|++|+|+|.+|. .++.
T Consensus 369 t~~~~~~aL~~~k~~~~~--~---~~~~W~--g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~-~i~~ 440 (623)
T PLN03150 369 TLLEEVSALQTLKSSLGL--P---LRFGWN--GDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPN-DISK 440 (623)
T ss_pred cCchHHHHHHHHHHhcCC--c---ccCCCC--CCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCH-HHhC
Confidence 345678899999998842 1 124785 478854 49999995321 2477777777777777764 5777
Q ss_pred CCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC
Q 006903 97 TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD 164 (626)
Q Consensus 97 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~ 164 (626)
+++|+.|+|++|+|.|.+|..++++++|+.|+|++|+|+|.+|+.+++|++|+.|||++|+|+|.+|.
T Consensus 441 L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~ 508 (623)
T PLN03150 441 LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPA 508 (623)
T ss_pred CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCCh
Confidence 77777777777777777777777777777777777777777777777777777777777777777665
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.1e-20 Score=179.15 Aligned_cols=164 Identities=15% Similarity=0.177 Sum_probs=125.8
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHH----------HHHHHHHhccCCCCCccccceEEEeC------
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSED----------FKNRMQKIDHVKHPNVLPPLAYYCSK------ 413 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~----------~~~ei~~l~~l~H~nIv~l~g~~~~~------ 413 (626)
..+++|.|+||.||.+.. ++..+|||.++......+. +.+|++.+.++.||+|..+..++...
T Consensus 35 ~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~ 113 (232)
T PRK10359 35 TIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLR 113 (232)
T ss_pred EEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccccccc
Confidence 458899999999999665 5778999999765433322 57999999999999999999886643
Q ss_pred --CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEee
Q 006903 414 --QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISE 491 (626)
Q Consensus 414 --~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~D 491 (626)
...+++|||++|.+|.++.. ++. ....+++.++..+| ..|++|||+||+||+++.++ +++.|
T Consensus 114 ~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH----~~gi~H~Dikp~Nili~~~g-i~liD 177 (232)
T PRK10359 114 YAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLH----QHGMVSGDPHKGNFIVSKNG-LRIID 177 (232)
T ss_pred ccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHH----HcCCccCCCChHHEEEeCCC-EEEEE
Confidence 35789999999999988742 222 34568999999999 68999999999999999988 99999
Q ss_pred ccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHH
Q 006903 492 YGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELL 539 (626)
Q Consensus 492 FGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ell 539 (626)
||.......... .........+..++|+||||+++.-+.
T Consensus 178 fg~~~~~~e~~a---------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 178 LSGKRCTAQRKA---------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCCcccccchhh---------HHHHHHHhHhcccccccceeEeehHHH
Confidence 998654322110 011222333557999999999986654
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=164.94 Aligned_cols=177 Identities=15% Similarity=0.160 Sum_probs=129.2
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHH-----HHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSE-----DFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~-----~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
...|++|+||+||.+.- .+..++.+.+.......+ -+.+|+++|+++. |+++.+++++ +..+++|||+.
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~ 81 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA 81 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence 47899999999997665 577888887765443222 5789999999995 5789998886 45799999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccC-CCCCeeeCCCCCeEEeeccCccccCCCcc
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNL-KSNNILFNNNMEPCISEYGLIVTENHDQS 503 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDl-kp~NILl~~~~~~kl~DFGl~~~~~~~~~ 503 (626)
|.+|.+.+.. ....++.+++.+|.++| ..||+|||| ||+|||++.++.++|+|||++........
T Consensus 82 G~~L~~~~~~----------~~~~~~~qi~~~L~~lH----~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 82 GAAMYQRPPR----------GDLAYFRAARRLLQQLH----RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred CccHHhhhhh----------hhHHHHHHHHHHHHHHH----HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 9998765421 11357788999999999 679999999 79999999999999999999874332211
Q ss_pred ----------------ccccccccchhhccc-cCCCC-CcchhHHHHHHHHHHHcCCCCCC
Q 006903 504 ----------------FLAQTSSLKINDISN-QMCST-IKADVYGFGVILLELLTGKLVQN 546 (626)
Q Consensus 504 ----------------~~~~~~~~~~pe~~~-~~~~~-~k~DVwSfGvvl~elltg~~p~~ 546 (626)
+...++.+..|+... -...+ ...+.++-|.-+|.++||..+..
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 001122223332111 11112 45688899999999999998754
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.8e-20 Score=195.73 Aligned_cols=185 Identities=25% Similarity=0.330 Sum_probs=156.0
Q ss_pred ccccCCCcceEEEE----eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecC
Q 006903 353 LLGRGKHGSLYRVV----LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~----~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
++|+|.||.|+.++ .+.|..+|.|.+++... .......|..++..++ ||.+|++...+.++...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 47999999999765 34578899998876542 1225567788888887 9999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccc
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF 504 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~ 504 (626)
+|+|...+. ....++......+...++-++.++| +.+|+|||+|++||+++.+|++++.|||+++..-.....
T Consensus 81 gg~lft~l~---~~~~f~~~~~~~~~aelaLald~lh----~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 81 GGDLFTRLS---KEVMFDELDVAFYLAELALALDHLH----KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred cchhhhccc---cCCchHHHHHHHHHHHHHHHHhhcc----hhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence 999999885 3456777778888899999999999 679999999999999999999999999998754322222
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCC
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNN 547 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~ 547 (626)
+++..||+||+.. .....+|.||||++++||+||..||..
T Consensus 154 -cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 154 -CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred -ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 7788999999987 557899999999999999999999875
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-18 Score=166.13 Aligned_cols=132 Identities=14% Similarity=0.207 Sum_probs=103.6
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccC-----CCCCccccceEEEeCC---e-EEEEE
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHV-----KHPNVLPPLAYYCSKQ---E-KLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l-----~H~nIv~l~g~~~~~~---~-~~lv~ 420 (626)
.+.||+|+||.||. .-.++.. +||++.... ...+++.+|+++++.+ .||||++++|++.++. . ..+|+
T Consensus 7 ~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 47899999999996 3334444 799887543 3456799999999999 6799999999998874 3 34789
Q ss_pred ee--cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHhccCCCceeccCCCCCeeeCC----CCCeEEeecc
Q 006903 421 EY--QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKAL-ALIHEELREDGIAHGNLKSNNILFNN----NMEPCISEYG 493 (626)
Q Consensus 421 Ey--~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL-~ylH~~~~~~~ivHrDlkp~NILl~~----~~~~kl~DFG 493 (626)
|| +++|+|.+++.. ..++.. ..++.+++.++ .||| +++||||||||+|||++. +..++|+||+
T Consensus 85 e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh----~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 85 DFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLL----DNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred cCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 99 668999999953 135544 35677888787 9999 689999999999999974 3479999954
Q ss_pred C
Q 006903 494 L 494 (626)
Q Consensus 494 l 494 (626)
.
T Consensus 155 G 155 (210)
T PRK10345 155 G 155 (210)
T ss_pred C
Confidence 3
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.9e-19 Score=195.24 Aligned_cols=241 Identities=22% Similarity=0.284 Sum_probs=172.3
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCC--CCHHHHHHHHHH--hccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWS--ISSEDFKNRMQK--IDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~ei~~--l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
..+.||++.|=+|.+|+.++|. |+||++-+.. ..-..|.++++. ...++|||.+.+.-+..+....|||=+|..+
T Consensus 27 ~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh 105 (1431)
T KOG1240|consen 27 YVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVKH 105 (1431)
T ss_pred eecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHhh
Confidence 3578999999999999998887 8899886554 344555544443 4556899999988887777778899999965
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc----CCC
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE----NHD 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~----~~~ 501 (626)
+|+|.+.. .+-+...+.+-|+.|+..||..+| ..||+|+|||.+|||++.-..+.++||.-.+.. +..
T Consensus 106 -nLyDRlST---RPFL~~iEKkWiaFQLL~al~qcH----~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 106 -NLYDRLST---RPFLVLIEKKWIAFQLLKALSQCH----KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred -hhhhhhcc---chHHHHHHHHHHHHHHHHHHHHHH----HcCccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 99999953 345677788889999999999999 689999999999999999989999999865431 111
Q ss_pred c--ccc----ccccccchhhccccC----------C-CCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccc
Q 006903 502 Q--SFL----AQTSSLKINDISNQM----------C-STIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEW 563 (626)
Q Consensus 502 ~--~~~----~~~~~~~~pe~~~~~----------~-~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 563 (626)
. .++ .....|.|||.+... . .+++-||||.||++.||++ |+++|. +.+.+. +.+..
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~----LSQL~a-Yr~~~- 251 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT----LSQLLA-YRSGN- 251 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc----HHHHHh-HhccC-
Confidence 1 111 123357888854321 1 3678999999999999988 566664 222221 11110
Q ss_pred ccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 564 TVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 564 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
..++...-+... -..+.+++..|++.||++|-++++.++.-.
T Consensus 252 ---~~~~e~~Le~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 252 ---ADDPEQLLEKIE---DVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred ---ccCHHHHHHhCc---CccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 111111111111 114778899999999999999999988743
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-17 Score=155.36 Aligned_cols=189 Identities=16% Similarity=0.206 Sum_probs=143.8
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCC-CCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKH-PNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H-~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
...||.|+||.+|.|. ..+|+.||||.-... ....++..|.++.+.++| ..|..+..|..++..-.+|||.. |.+|
T Consensus 20 vrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsL 97 (341)
T KOG1163|consen 20 VRKIGSGSFGDIYLGISITSGEEVAIKLESSK-AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSL 97 (341)
T ss_pred EEeecCCchhheeeeeeccCCceEEEEeeccc-CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccH
Confidence 3679999999999998 778999999976543 233466778888887775 45666666777778889999988 6799
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC---CCeEEeeccCccccCCC----
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN---MEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl~~~~~~~---- 501 (626)
.++..- -...++....+-.|-|+..-++|+| .+++|||||||+|.|..-+ ..+.+.|||+++.....
T Consensus 98 EdLfnf--C~R~ftmkTvLMLaDQml~RiEyvH----~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~ 171 (341)
T KOG1163|consen 98 EDLFNF--CSRRFTMKTVLMLADQMLSRIEYVH----LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQ 171 (341)
T ss_pred HHHHHH--HhhhhhHHhHHHHHHHHHHHHHHHH----hhccccccCCccceeeccccccceEEEEeccchhhhccccccc
Confidence 988853 2346888899999999999999999 5789999999999999743 45789999998653221
Q ss_pred ------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCC
Q 006903 502 ------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNN 547 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~ 547 (626)
.....||..|+.--...+...+.+-|+=|+|.+|...--|..||.+
T Consensus 172 HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg 223 (341)
T KOG1163|consen 172 HIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG 223 (341)
T ss_pred cCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence 1223455555443322223346788999999999999999999974
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.4e-17 Score=157.47 Aligned_cols=251 Identities=16% Similarity=0.198 Sum_probs=175.6
Q ss_pred cccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 350 PAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.++.||+|.||..+.|+ +-+++.||||.-...+ ...++..|.+..+.|. .+.|...+-|-.....-.||+|.+ |.+
T Consensus 32 VGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPS 109 (449)
T KOG1165|consen 32 VGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPS 109 (449)
T ss_pred eccccccCcceeeecccccccCceEEEEeccccC-CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcC
Confidence 36889999999999998 7789999999754322 3345666777666654 577777776666666778999988 678
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC-----CCeEEeeccCccccCCCc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN-----MEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-----~~~kl~DFGl~~~~~~~~ 502 (626)
|.|+..- .+..|+...+..+|.|+..-++|+| ++.+|.|||||+|.||..- ..+.+.|||+|+..-...
T Consensus 110 LEDLFD~--CgR~FSvKTV~miA~Qmi~rie~vH----~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 110 LEDLFDL--CGRRFSVKTVAMIAKQMITRIEYVH----EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred HHHHHHH--hcCcccHHhHHHHHHHHHHHHHHHH----hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 8887753 2457899999999999999999999 6789999999999999753 347899999997532211
Q ss_pred ----------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCC--CcchhHHHHHHhhcccccccccH
Q 006903 503 ----------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNN--GFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 503 ----------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~--~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
....||..||.--+-.+...+.+-|.=|+|-|+...+-|..||.+ .....+..+.+-.......+ .
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i--~ 261 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPI--E 261 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCH--H
Confidence 224567777776666666668899999999999999999999973 22333333333322211111 1
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
.+ .+. -++++..-++.+.+ .+=.+-|+.+-+...+..+.+
T Consensus 262 ~L-c~g-~P~efa~Yl~yvR~---L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 262 VL-CEG-FPEEFATYLRYVRR---LDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred HH-Hhc-CHHHHHHHHHHHHh---cCcccCCCHHHHHHHHHHHHH
Confidence 11 112 23444445555444 466677887776666665543
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.4e-18 Score=167.92 Aligned_cols=228 Identities=18% Similarity=0.288 Sum_probs=142.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCC----------CCccccceEEE----
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKH----------PNVLPPLAYYC---- 411 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H----------~nIv~l~g~~~---- 411 (626)
+++||.|+++.||.+.. .+|+.+|+|.+..... .-+++++|.-....+.+ -.++..++...
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 47899999999999995 5699999998854432 22567777655555332 12222222221
Q ss_pred -----eCC--------eEEEEEeecCCCChhHhhcC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccC
Q 006903 412 -----SKQ--------EKLLVYEYQPNGSLFNLLHG----SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNL 474 (626)
Q Consensus 412 -----~~~--------~~~lv~Ey~~~g~L~~~l~~----~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDl 474 (626)
... ..+++|+-+. +||.+++.. ......+....++.+..|+.+.+++|| ..||||+||
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh----~~GlVHgdi 171 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH----SYGLVHGDI 171 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH----HTTEEEST-
T ss_pred CcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh----hcceEeccc
Confidence 111 2356777774 588887631 111123445667788899999999999 579999999
Q ss_pred CCCCeeeCCCCCeEEeeccCccccCCCccccccccccchhhcccc--------CCCCCcchhHHHHHHHHHHHcCCCCCC
Q 006903 475 KSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQ--------MCSTIKADVYGFGVILLELLTGKLVQN 546 (626)
Q Consensus 475 kp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~--------~~~~~k~DVwSfGvvl~elltg~~p~~ 546 (626)
||+|++++.+|.++++||+.....+........+..+.+||.... ..++.+.|.|++|+++|.|.+++.||.
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG 251 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence 999999999999999999876554432222233466888886533 245889999999999999999999987
Q ss_pred CCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCC
Q 006903 547 NGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNER 600 (626)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R 600 (626)
....... .++ .-..+. +.++.+..|+...|+.+|++|
T Consensus 252 ~~~~~~~-------~~~---------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 252 LSSPEAD-------PEW---------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CCGGGST-------SGG---------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCcccc-------ccc---------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 3211100 000 001233 455668889999999999988
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3e-17 Score=160.22 Aligned_cols=133 Identities=19% Similarity=0.374 Sum_probs=112.9
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---------HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---------SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
+.||+|++|.||+|.. +|..+++|........ ...+.+|++++..++|++|.....++...+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4699999999999987 6778999986543211 13577899999999999999888888888889999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
+++++|.+++... .+ .+..++.+++.+|.++| ..+++|||++|+|||++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH----~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN------GM-EELELSREIGRLVGKLH----SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHH----hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999998531 12 78899999999999999 67999999999999999 78899999998754
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.5e-17 Score=161.99 Aligned_cols=137 Identities=16% Similarity=0.210 Sum_probs=105.0
Q ss_pred ccccccCCCcceEEEE--eCCCcEEEEEEcCCCCC--------------------C-----HHHHHHHHHHhccCCCCCc
Q 006903 351 AELLGRGKHGSLYRVV--LDDGLMLAVKRLRDWSI--------------------S-----SEDFKNRMQKIDHVKHPNV 403 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~--~~~g~~vAvK~l~~~~~--------------------~-----~~~~~~ei~~l~~l~H~nI 403 (626)
.+.||+|+||.||+|. ..+|+.||+|.++.... . ...+.+|++.+.++.+..
T Consensus 33 ~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~- 111 (237)
T smart00090 33 GGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAG- 111 (237)
T ss_pred CCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 4689999999999998 67899999999874321 0 023568999999997633
Q ss_pred cccceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC-ceeccCCCCCeeeC
Q 006903 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG-IAHGNLKSNNILFN 482 (626)
Q Consensus 404 v~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~-ivHrDlkp~NILl~ 482 (626)
+.....+.. ...++||||+++++|...... ...+.......++.+++.++.|+| ..| |+||||||+||+++
T Consensus 112 i~~p~~~~~-~~~~lV~E~~~g~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH----~~g~iiH~Dikp~NIli~ 183 (237)
T smart00090 112 VPVPKPIAW-RRNVLVMEFIGGDGLPAPRLK---DVEPEEEEEFELYDDILEEMRKLY----KEGELVHGDLSEYNILVH 183 (237)
T ss_pred CCCCeeeEe-cCceEEEEEecCCcccccccc---cCCcchHHHHHHHHHHHHHHHHHH----hcCCEEeCCCChhhEEEE
Confidence 332222222 245899999999888765421 234555567789999999999999 678 99999999999999
Q ss_pred CCCCeEEeeccCccc
Q 006903 483 NNMEPCISEYGLIVT 497 (626)
Q Consensus 483 ~~~~~kl~DFGl~~~ 497 (626)
++.++++|||.+..
T Consensus 184 -~~~i~LiDFg~a~~ 197 (237)
T smart00090 184 -DGKVVIIDVSQSVE 197 (237)
T ss_pred -CCCEEEEEChhhhc
Confidence 78999999998764
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-17 Score=164.77 Aligned_cols=192 Identities=20% Similarity=0.266 Sum_probs=134.1
Q ss_pred CCCCccccceEEEeC---------------------------CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHH
Q 006903 399 KHPNVLPPLAYYCSK---------------------------QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAA 451 (626)
Q Consensus 399 ~H~nIv~l~g~~~~~---------------------------~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~ 451 (626)
+|||||+++++|++. ..+|+||.-.+. +|++++... ..+...+.-+..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~----~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR----HRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC----CCchHHHHHHHH
Confidence 599999999987642 236888887754 899999642 345556677889
Q ss_pred HHHHHHHHHHHhccCCCceeccCCCCCeeeC--CCCC--eEEeeccCccccCC---------Cccccccccccchhhccc
Q 006903 452 CVAKALALIHEELREDGIAHGNLKSNNILFN--NNME--PCISEYGLIVTENH---------DQSFLAQTSSLKINDISN 518 (626)
Q Consensus 452 ~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~--~~~~--~kl~DFGl~~~~~~---------~~~~~~~~~~~~~pe~~~ 518 (626)
|+++|+.||| .+||.|||+|++|||+. +|.- ..|+|||.+..... +.....|....|+||+..
T Consensus 349 QlLEav~hL~----~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 349 QLLEAVTHLH----KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHH----HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 9999999999 67999999999999984 4443 47999998643222 222345666789999876
Q ss_pred cCCC------CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhc
Q 006903 519 QMCS------TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRC 592 (626)
Q Consensus 519 ~~~~------~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C 592 (626)
..+. -.|+|.|+.|.+.||+++...||+...+..--.+. +++.... ..++.++..+.+++...
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~-Yqe~qLP----------alp~~vpp~~rqlV~~l 493 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT-YQESQLP----------ALPSRVPPVARQLVFDL 493 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh-hhhhhCC----------CCcccCChHHHHHHHHH
Confidence 5542 35899999999999999999999852221111111 1111111 12233444577888889
Q ss_pred cCCCCCCCCCHHHHHHHH
Q 006903 593 INQSPNERPSMNQVAVMI 610 (626)
Q Consensus 593 l~~dP~~RPs~~ev~~~L 610 (626)
++.||++||+..-....|
T Consensus 494 L~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 494 LKRDPSKRVSPNIAANVL 511 (598)
T ss_pred hcCCccccCCccHHHhHH
Confidence 999999999876554444
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-17 Score=157.03 Aligned_cols=129 Identities=21% Similarity=0.374 Sum_probs=107.3
Q ss_pred ccccCCCcceEEEEeCCCcEEEEEEcCCCCC-C--------HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 353 LLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI-S--------SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-~--------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
+||+|+||.||+|.+ +|..|++|....... . .+.+.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 578899998654321 1 245678999999999998777777777777789999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
++++|.+++.... . .++.+++.+|.++| ..+++|||++|+||+++ ++.+++.|||++..
T Consensus 80 ~g~~l~~~~~~~~---~-------~~~~~i~~~l~~lH----~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN---D-------ELLREIGRLVGKLH----KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH---H-------HHHHHHHHHHHHHH----HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999885311 0 78999999999999 68999999999999999 78999999998754
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.7e-17 Score=156.23 Aligned_cols=131 Identities=21% Similarity=0.267 Sum_probs=104.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC-----------------------CHHHHHHHHHHhccCCCCC--ccc
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI-----------------------SSEDFKNRMQKIDHVKHPN--VLP 405 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-----------------------~~~~~~~ei~~l~~l~H~n--Iv~ 405 (626)
.+.||+|+||.||++..++|+.||||+++.... ....+..|+..+.++.|++ +..
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~ 99 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPK 99 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCc
Confidence 578999999999999988899999998754221 0123567888888888875 333
Q ss_pred cceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 406 l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
.++ ....++||||+++++|.+.... .....++.+++.++.++| ..+|+||||||+||++++++
T Consensus 100 ~~~----~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh----~~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 100 PID----WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAY----KHGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred eee----cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHH----HCCCCcCCCCcccEEEcCCC
Confidence 332 3456899999999998776421 234578899999999999 57999999999999999999
Q ss_pred CeEEeeccCcccc
Q 006903 486 EPCISEYGLIVTE 498 (626)
Q Consensus 486 ~~kl~DFGl~~~~ 498 (626)
.++|+|||++...
T Consensus 163 ~~~liDfg~~~~~ 175 (198)
T cd05144 163 KIYIIDWPQMVST 175 (198)
T ss_pred cEEEEECCccccC
Confidence 9999999998543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.9e-17 Score=179.12 Aligned_cols=131 Identities=21% Similarity=0.351 Sum_probs=107.8
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEE-cCCCCC--------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKR-LRDWSI--------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~-l~~~~~--------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
+.+.||+|+||.||+|.+.... +++|+ +.+... ..+.+.+|+++++.++|++++....++......++||
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred ccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence 4578999999999999875443 33333 222111 1245889999999999999999888888777889999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
||+++++|.+++. ....++.+++++|.||| +.+|+||||||+|||+ +++.++|+|||+++.
T Consensus 416 E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH----~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 416 EYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLH----KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHH----hCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 9999999999884 35678999999999999 6799999999999999 577899999999865
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-16 Score=179.56 Aligned_cols=184 Identities=20% Similarity=0.334 Sum_probs=146.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC---CCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK---HPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~---H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
...||+|+||+||+|...+|+.||+|.=+.... .+|.--.+++.+|+ -+-|..+...+.-.+.-+||+||.+.|+
T Consensus 703 ~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~--WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gt 780 (974)
T KOG1166|consen 703 SKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP--WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGT 780 (974)
T ss_pred EeeeccccceEEEEeecCCCcEEEEEeecCCCc--eeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeecccccc
Confidence 467999999999999988899999998765432 23333344445554 2345555555666788899999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-------CCCeEEeeccCcccc--
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-------NMEPCISEYGLIVTE-- 498 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-------~~~~kl~DFGl~~~~-- 498 (626)
|.+++. ..+.++|...+.++.++++-+..|| ..+|||+||||+|.||.. ...++|.|||-+...
T Consensus 781 lld~~N---~~~~m~e~lv~~~~~qml~ive~lH----~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~l 853 (974)
T KOG1166|consen 781 LLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLH----AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKL 853 (974)
T ss_pred HHHhhc---cCCCCCchhhhHHHHHHHHHHHHHH----hcceecccCCcceeEeecccCCCCcccceEEEecccceeeeE
Confidence 999996 4567899999999999999999999 679999999999999953 345799999987532
Q ss_pred -CCCc--cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCC
Q 006903 499 -NHDQ--SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKL 543 (626)
Q Consensus 499 -~~~~--~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~ 543 (626)
.... ....++..+-..|+..+..+++.+|.|.+.-+++-|+.|+.
T Consensus 854 fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 854 FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 1111 22345677788899999999999999999999999999974
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-16 Score=165.31 Aligned_cols=171 Identities=20% Similarity=0.303 Sum_probs=127.4
Q ss_pred eEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccC
Q 006903 415 EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL 494 (626)
Q Consensus 415 ~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 494 (626)
..|+.|++|...+|.+|+...+.....+|...+.++.|++.|+.| ++.+|||+||.||....+..+||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y-------k~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY-------KGLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh-------ccchhhhccccccccccchhhhhhhhhh
Confidence 468999999999999999876777788999999999999999998 4799999999999999999999999999
Q ss_pred ccccCCCc---------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc
Q 006903 495 IVTENHDQ---------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV 565 (626)
Q Consensus 495 ~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 565 (626)
........ +...++..||.||.+.+..|+.|+||||+|++|+|+++ +|..+.........+....
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T~~er~~t~~d~r~g~--- 476 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFSTQFERIATLTDIRDGI--- 476 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---HhccHHHHHHhhhhhhcCC---
Confidence 75433222 34567889999999999999999999999999999987 1222222111111211111
Q ss_pred ccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 006903 566 EVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606 (626)
Q Consensus 566 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev 606 (626)
+++....+ .+.=..++.+++...|.+||++.++
T Consensus 477 --ip~~~~~d------~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 477 --IPPEFLQD------YPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred --CChHHhhc------CcHHHHHHHHhcCCCcccCchHHHH
Confidence 11111110 1123456778999999999955443
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.7e-16 Score=146.89 Aligned_cols=134 Identities=20% Similarity=0.276 Sum_probs=94.8
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHH-------------------------HHHHHHhccCCCCC--cc
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDF-------------------------KNRMQKIDHVKHPN--VL 404 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~-------------------------~~ei~~l~~l~H~n--Iv 404 (626)
+.||+|+||.||+|...+++.||||+++.......+. ..|.+.+.++.+.. +.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 5799999999999998789999999887543211111 24455555554332 22
Q ss_pred ccceEEEeCCeEEEEEeecCCCChhHh-hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC
Q 006903 405 PPLAYYCSKQEKLLVYEYQPNGSLFNL-LHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN 483 (626)
Q Consensus 405 ~l~g~~~~~~~~~lv~Ey~~~g~L~~~-l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~ 483 (626)
+.+++ ...++||||++++.+... +... ... .....++.+++.++.++|. +.+|+||||||+||+++
T Consensus 83 ~~~~~----~~~~lv~e~~~g~~~~~~~l~~~----~~~-~~~~~~~~~~~~~l~~lh~---~~~ivH~Dl~p~Nili~- 149 (187)
T cd05119 83 KPIDL----NRHVLVMEFIGGDGIPAPRLKDV----RLL-EDPEELYDQILELMRKLYR---EAGLVHGDLSEYNILVD- 149 (187)
T ss_pred ceEec----CCCEEEEEEeCCCCccChhhhhh----hhc-ccHHHHHHHHHHHHHHHhh---ccCcCcCCCChhhEEEE-
Confidence 32222 346899999999654321 1110 011 5577899999999999993 27999999999999999
Q ss_pred CCCeEEeeccCcccc
Q 006903 484 NMEPCISEYGLIVTE 498 (626)
Q Consensus 484 ~~~~kl~DFGl~~~~ 498 (626)
++.++++|||.+...
T Consensus 150 ~~~~~liDfg~a~~~ 164 (187)
T cd05119 150 DGKVYIIDVPQAVEI 164 (187)
T ss_pred CCcEEEEECcccccc
Confidence 889999999998643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=2e-15 Score=167.58 Aligned_cols=198 Identities=19% Similarity=0.241 Sum_probs=136.4
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.|..|+||.||..+.+ +.+.+|+| ++++.. +.+- ++.....|.+| ||-.
T Consensus 88 IklisngAygavylvrh~~trqrfa~k-iNkq~l----ilRn--ilt~a~npfvv---------------------gDc~ 139 (1205)
T KOG0606|consen 88 IKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL----ILRN--ILTFAGNPFVV---------------------GDCA 139 (1205)
T ss_pred eEeeccCCCCceeeeeccccccchhhc-ccccch----hhhc--cccccCCccee---------------------chhh
Confidence 478999999999999865 46778884 443221 1110 22233333333 5666
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---------
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--------- 500 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--------- 500 (626)
..++. .++++-. .+.+++|+| +.+|+|||+||+|.++..-|++|+.|||+++....
T Consensus 140 tllk~---~g~lPvd--------mvla~Eylh----~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg 204 (1205)
T KOG0606|consen 140 TLLKN---IGPLPVD--------MVLAVEYLH----SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEG 204 (1205)
T ss_pred hhccc---CCCCcch--------hhHHhHhhc----cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhc
Confidence 66642 2233322 267899999 56999999999999999999999999998642100
Q ss_pred ---------CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHH
Q 006903 501 ---------DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 501 ---------~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
....+++++.|.+||++....|+..+|+|++|+++||.+-|..||++. ...+.+..++.++.....-|+
T Consensus 205 ~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd-tpeelfg~visd~i~wpE~de- 282 (1205)
T KOG0606|consen 205 HIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD-TPEELFGQVISDDIEWPEEDE- 282 (1205)
T ss_pred chHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC-CHHHHHhhhhhhhccccccCc-
Confidence 112357899999999999999999999999999999999999999743 334444444444322111122
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCC
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERP 601 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 601 (626)
....++.+++.+.++.+|..|-
T Consensus 283 --------a~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 283 --------ALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred --------CCCHHHHHHHHHHHHhChHhhc
Confidence 2233467778888999999994
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.3e-15 Score=134.06 Aligned_cols=133 Identities=20% Similarity=0.150 Sum_probs=111.7
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCC--CCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKH--PNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H--~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
+.||+|.++.||++...+ ..+++|....... ..++.+|+..++.++| .++.++++++...+..+++|||++++.+.
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~ 81 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD 81 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence 579999999999999754 7899999866443 5678999999999977 58888888887778899999999987665
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
.+ +......++.+++.+++++|... ..+++|+|++|+||++++.+.+++.|||.+..
T Consensus 82 ~~----------~~~~~~~~~~~~~~~l~~lh~~~-~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 82 EV----------SEEEKEDIAEQLAELLAKLHQLP-LLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cC----------CHHHHHHHHHHHHHHHHHHhCCC-ceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 43 45667788999999999999431 25799999999999999989999999998753
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-14 Score=143.43 Aligned_cols=135 Identities=15% Similarity=0.237 Sum_probs=105.1
Q ss_pred cccccc-cCCCcceEEEEeCCCcEEEEEEcCCCC--------------CCHHHHHHHHHHhccCCCCCc--cccceEEEe
Q 006903 350 PAELLG-RGKHGSLYRVVLDDGLMLAVKRLRDWS--------------ISSEDFKNRMQKIDHVKHPNV--LPPLAYYCS 412 (626)
Q Consensus 350 ~~~~lG-~G~fG~Vy~~~~~~g~~vAvK~l~~~~--------------~~~~~~~~ei~~l~~l~H~nI--v~l~g~~~~ 412 (626)
...+|| .|+.|+||++... +..++||.+.... .....+.+|++++.+++|++| +..+++...
T Consensus 35 ~~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 35 QARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred cCceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 356898 8999999999875 6788999875321 122457889999999999885 666766443
Q ss_pred CC----eEEEEEeecCC-CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCe
Q 006903 413 KQ----EKLLVYEYQPN-GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEP 487 (626)
Q Consensus 413 ~~----~~~lv~Ey~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~ 487 (626)
+. ..++||||+++ .+|.+++.. ..++.. .+.+++.++.+|| ..||+||||||+|||++.++.+
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH----~~GI~HrDlkp~NILv~~~~~v 181 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFH----DAGVYHADLNAHNILLDPDGKF 181 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHH----HCCCCCCCCCchhEEEcCCCCE
Confidence 32 23599999997 689998853 234433 3578999999999 6899999999999999998899
Q ss_pred EEeeccCccc
Q 006903 488 CISEYGLIVT 497 (626)
Q Consensus 488 kl~DFGl~~~ 497 (626)
+++|||.+..
T Consensus 182 ~LIDfg~~~~ 191 (239)
T PRK01723 182 WLIDFDRGEL 191 (239)
T ss_pred EEEECCCccc
Confidence 9999998755
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.4e-13 Score=145.38 Aligned_cols=139 Identities=21% Similarity=0.243 Sum_probs=97.0
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---------------------------H--------------HHHHH
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---------------------------S--------------EDFKN 390 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---------------------------~--------------~~~~~ 390 (626)
+.||.|++|.||+|++.+|+.||||+.+..-.. . -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 579999999999999999999999998643100 0 02444
Q ss_pred HHHHhccC----CCCCccccceEE-EeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHhc
Q 006903 391 RMQKIDHV----KHPNVLPPLAYY-CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAK-ALALIHEEL 464 (626)
Q Consensus 391 ei~~l~~l----~H~nIv~l~g~~-~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~-gL~ylH~~~ 464 (626)
|.+.+.++ +|.+-+.+-..| ......+|||||++|++|.++...... .. .+..++..++. .+..+|
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~--- 274 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVL--- 274 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHH---
Confidence 55544444 232223332333 224457999999999999887642111 12 23456666665 366777
Q ss_pred cCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 465 REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 465 ~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
..|++|+|+||.||++++++.+++.|||++....
T Consensus 275 -~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 275 -RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred -hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 5799999999999999999999999999976543
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.8e-14 Score=156.62 Aligned_cols=244 Identities=19% Similarity=0.241 Sum_probs=174.2
Q ss_pred cccccCCCcceEEEEe--CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL--DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+|+.|-.... .....+|+|.+..... ..+....|..+-..+. |+|++.+++.....+..++++||..+
T Consensus 26 ~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g 105 (601)
T KOG0590|consen 26 RSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDG 105 (601)
T ss_pred ccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcccc
Confidence 4599999999987764 3456677777765432 2234455777666666 99999999999999999999999999
Q ss_pred CChhHhh-cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCccccCC-Cc
Q 006903 426 GSLFNLL-HGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTENH-DQ 502 (626)
Q Consensus 426 g~L~~~l-~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~~~-~~ 502 (626)
|++.+.+ +. .....+......+..|+..++.|+|. ..++.|||+||+|.+++..+ ..+++|||+|..... ..
T Consensus 106 ~~~f~~i~~~--~~~~~~~~~~~~~~~ql~s~l~~~H~---~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g 180 (601)
T KOG0590|consen 106 GSLFSKISHP--DSTGTSSSSASRYLPQLNSGLSYLHP---ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNG 180 (601)
T ss_pred cccccccccC--CccCCCCcchhhhhhhhccCccccCc---ccccccCCCCCccchhccCCCcccCCCchhhccccccCC
Confidence 9999888 42 22244555677889999999999994 36899999999999999999 999999999865333 11
Q ss_pred -----ccccc-ccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 503 -----SFLAQ-TSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 503 -----~~~~~-~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
....+ +..|++||...+ .......|+||.|+++.-+++|..|+................... + ..
T Consensus 181 ~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---~-----~~ 252 (601)
T KOG0590|consen 181 AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGR---F-----TQ 252 (601)
T ss_pred cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccc---c-----cc
Confidence 22345 888999998766 355788999999999999999999986322211110000000000 0 00
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...........++..+++..+|..|.+.+++..
T Consensus 253 ~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 253 LPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred CccccCChhhhhcccccccCCchhccccccccc
Confidence 011112234667777888899999999888744
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.2e-12 Score=141.70 Aligned_cols=112 Identities=33% Similarity=0.581 Sum_probs=97.8
Q ss_pred CcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccC
Q 006903 124 LTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSN 200 (626)
Q Consensus 124 L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~ 200 (626)
++.|+|++|.|+|.+|..+++|++|+.|+|++|+|+|.+|. ++.+++|+.|++++|+|+|.+|+. .+++|+.|++++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 77899999999999999999999999999999999999996 899999999999999999999974 688999999999
Q ss_pred CcCCCCCCCCCCCC----cccCCCCCCCCCCCCCCCCCC
Q 006903 201 NNLSGPVPGVNGRL----GADSFSGNPGLCGKPLPNACP 235 (626)
Q Consensus 201 N~l~g~ip~~~~~~----~~~~~~gn~~lcg~~~~~~c~ 235 (626)
|+|+|.+|..++.. ....+.+|+++|+.|....|.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 99999999876532 345678999999977656674
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-11 Score=116.28 Aligned_cols=131 Identities=18% Similarity=0.192 Sum_probs=95.1
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhHh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNL 431 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~ 431 (626)
+.++.|.++.||++... +..+++|...........+.+|++.++.+.+.+++.-+-++ .....++||||+++.++.+.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~-~~~~~~lv~e~i~G~~l~~~ 81 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYF-DPETGVLITEFIEGSELLTE 81 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEE-eCCCCeEEEEecCCCccccc
Confidence 56899999999999875 77899998765433334578899999888766655433222 33446899999999877543
Q ss_pred hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcc-CCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 432 LHGSENGQSFDWGSRLRVAACVAKALALIHEELR-EDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 432 l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~-~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
. . ....++.+++++|+.||..-. ..+++|+|++|.||+++ ++.+++.|||.+.
T Consensus 82 ~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 82 D--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred c--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 1 0 112456789999999994210 12369999999999999 5689999999864
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.6e-12 Score=125.18 Aligned_cols=202 Identities=19% Similarity=0.276 Sum_probs=135.6
Q ss_pred HHHhccCCCCCccccceEEEeC-----CeEEEEEeecCCCChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhcc
Q 006903 392 MQKIDHVKHPNVLPPLAYYCSK-----QEKLLVYEYQPNGSLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELR 465 (626)
Q Consensus 392 i~~l~~l~H~nIv~l~g~~~~~-----~~~~lv~Ey~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~ 465 (626)
+..+-.+.|.|||++..|+.+. ....++.|||..|++.++|+.-+ .+..+......+++.||..||.|||..
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-- 195 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-- 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc--
Confidence 3445556799999999987654 34678999999999999997532 334566677789999999999999965
Q ss_pred CCCceeccCCCCCeeeCCCCCeEEeeccCccc-------cCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHH
Q 006903 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLIVT-------ENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLEL 538 (626)
Q Consensus 466 ~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~-------~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~el 538 (626)
++.|+|+++..+-|.+..++-+|+.---.... .....+...+.++|.+|+.......+.++|||+||.-.+||
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 78899999999999999998888753211100 01111222345567777766555667799999999999999
Q ss_pred HcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 539 LTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 539 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
..+..-..+..+-...-..+. ..+..... ..=.+++.+|++..|..||+|++++...
T Consensus 276 ailEiq~tnseS~~~~ee~ia----------~~i~~len-----~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 276 AILEIQSTNSESKVEVEENIA----------NVIIGLEN-----GLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HHheeccCCCcceeehhhhhh----------hheeeccC-----ccccCcCcccccCCCCCCcchhhhhcCc
Confidence 988754332222111100000 00000000 0012456789999999999999876543
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.5e-11 Score=131.29 Aligned_cols=139 Identities=16% Similarity=0.193 Sum_probs=88.1
Q ss_pred cccccCCCcceEEEEeCC-CcEEEEEEcCCCCC---------------------------CH--------H------HHH
Q 006903 352 ELLGRGKHGSLYRVVLDD-GLMLAVKRLRDWSI---------------------------SS--------E------DFK 389 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~---------------------------~~--------~------~~~ 389 (626)
+.||+|++|.||+|++++ |+.||||+.+..-. .. + ++.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 579999999999999877 99999999974310 00 1 233
Q ss_pred HHHHHhccC----CCCCccccceEEEe-CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 006903 390 NRMQKIDHV----KHPNVLPPLAYYCS-KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464 (626)
Q Consensus 390 ~ei~~l~~l----~H~nIv~l~g~~~~-~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~ 464 (626)
+|...+.++ .+.+.+.+-.++.+ ....+|||||+.|+.+.++-.-... ..+ +..++...+.. |+++-.
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~--g~d---~~~la~~~v~~--~~~Qif 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAA--GTD---MKLLAERGVEV--FFTQVF 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhc--CCC---HHHHHHHHHHH--HHHHHH
Confidence 444433333 23444444343332 4567899999999999875321111 121 12222222221 222211
Q ss_pred cCCCceeccCCCCCeeeCCCC----CeEEeeccCcccc
Q 006903 465 REDGIAHGNLKSNNILFNNNM----EPCISEYGLIVTE 498 (626)
Q Consensus 465 ~~~~ivHrDlkp~NILl~~~~----~~kl~DFGl~~~~ 498 (626)
..|++|+|+||.||+++.++ .+++.|||++...
T Consensus 278 -~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 278 -RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred -hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 46999999999999999988 8999999997554
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.7e-13 Score=118.76 Aligned_cols=136 Identities=25% Similarity=0.431 Sum_probs=113.5
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|.|+.|.|+-.. | .+..+.+|++|++++|++. .+|.+++.++.|+.|+++-|++. .+|..|+.++.|+.||
T Consensus 33 s~ITrLtLSHNKl~~vp-p-nia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 33 SNITRLTLSHNKLTVVP-P-NIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhcccCceeecC-C-cHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 46888999999998543 3 6899999999999999998 69999999999999999999998 7899999999999999
Q ss_pred ccCCcCCc-cCCC-ccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCCCCCCCCCC
Q 006903 153 ISNNNFSS-ELPD-LSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 153 ls~N~l~g-~~p~-~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
|++|+++. .+|. |..++.|+.|++++|.|.-..|+. .+++|+.|.+..|.|- ++|..++.
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~ 171 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGD 171 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh-hCcHHHHH
Confidence 99999975 4675 777788888888888887555543 5788888888888764 46666543
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.9e-12 Score=134.82 Aligned_cols=114 Identities=26% Similarity=0.403 Sum_probs=68.3
Q ss_pred ccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccc-cccChhhhcCCCCCeEEccCCcCCccCCCccCcCCC
Q 006903 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS-GNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGL 171 (626)
Q Consensus 93 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~-g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L 171 (626)
.++.++.|++|.+++|++. .+-.+++.++.|+.+.+..|+|. .-||+.+.+|..|.+||||+|++...+-.+-...++
T Consensus 50 EL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~ 128 (1255)
T KOG0444|consen 50 ELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNS 128 (1255)
T ss_pred HHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCc
Confidence 3455555666666666655 23344555555555555555552 236666777777777777777776544446666667
Q ss_pred cEEEcCCCcccccCCCCC---CCCccEEEccCCcCCCCCC
Q 006903 172 LTFFAENNQLRGGIPEFD---FSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 172 ~~l~l~~N~l~g~ip~~~---~~~L~~l~ls~N~l~g~ip 208 (626)
..|+||+|++. +||... +.-|-.||||+|.|.--.|
T Consensus 129 iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~LPP 167 (1255)
T KOG0444|consen 129 IVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLEMLPP 167 (1255)
T ss_pred EEEEcccCccc-cCCchHHHhhHhHhhhccccchhhhcCH
Confidence 77777777765 566543 3445566777777764444
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.14 E-value=6e-11 Score=126.44 Aligned_cols=244 Identities=18% Similarity=0.237 Sum_probs=167.5
Q ss_pred hhhhccccccccc--CCCcceEEEEe---CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCC-CCCccccceEEEeCC
Q 006903 344 EDLLRAPAELLGR--GKHGSLYRVVL---DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQ 414 (626)
Q Consensus 344 ~~l~~~~~~~lG~--G~fG~Vy~~~~---~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~ 414 (626)
.+-.......+|. |.+|.||.+.. .++..+|+|+-+... .....-.+|+....+++ |+|.++....+...+
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~ 191 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG 191 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC
Confidence 3333344577999 99999999875 468889999844322 22233445666666664 999999888889999
Q ss_pred eEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHH----HHHHHHHhccCCCceeccCCCCCeeeCCC-CCeEE
Q 006903 415 EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAK----ALALIHEELREDGIAHGNLKSNNILFNNN-MEPCI 489 (626)
Q Consensus 415 ~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~----gL~ylH~~~~~~~ivHrDlkp~NILl~~~-~~~kl 489 (626)
..++-+|++. .+|..+.+. ....++....+.+..+..+ |+.++| ..+|+|-|+||.||.+..+ ...++
T Consensus 192 ~lfiqtE~~~-~sl~~~~~~--~~~~~p~~~l~~~~~~~~~~~~~al~~~h----s~~~~~~~~kp~~i~~~~~~~s~~~ 264 (524)
T KOG0601|consen 192 ILFIQTELCG-ESLQSYCHT--PCNFLPDNLLWNSLRDWLSRDVTALSHLH----SNNIVHDDLKPANIFTTSDWTSCKL 264 (524)
T ss_pred cceeeecccc-chhHHhhhc--ccccCCchhhhhHHhhhhhcccccccccC----CCcccccccchhheecccccceeec
Confidence 9999999985 688888863 2233555666677777777 999999 7899999999999999999 88899
Q ss_pred eeccCccccCCCc---ccc-----ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc
Q 006903 490 SEYGLIVTENHDQ---SFL-----AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE 561 (626)
Q Consensus 490 ~DFGl~~~~~~~~---~~~-----~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 561 (626)
.|||+........ .+. .+...|+++|.... .++..+|+||+|.+..|..++..+...+.. ..|... +.
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-~~W~~~--r~ 340 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN-SSWSQL--RQ 340 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC-CCcccc--cc
Confidence 9999875432211 111 34456888887654 457899999999999999998876543311 112110 00
Q ss_pred c-cccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 562 E-WTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 562 ~-~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. ...+.++. -..++...+..+++.+|..|++.+.+..
T Consensus 341 ~~ip~e~~~~----------~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 341 GYIPLEFCEG----------GSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ccCchhhhcC----------cchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0 00111110 1112334677899999999999887643
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.7e-10 Score=109.40 Aligned_cols=142 Identities=20% Similarity=0.242 Sum_probs=109.8
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCC--CccccceEEEeC---CeEEEEEeecC
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHP--NVLPPLAYYCSK---QEKLLVYEYQP 424 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~--nIv~l~g~~~~~---~~~~lv~Ey~~ 424 (626)
+.|+.|.++.||++...+|..+++|....... ...++.+|.++++.+++. ++.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999987778999999865433 346789999999998764 456666665543 25689999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL---------------------------------------- 464 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~---------------------------------------- 464 (626)
+.++.+.+.. ..++...+..++.++++.|.+||+.-
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9888776521 34677788888999999999998420
Q ss_pred ------------cCCCceeccCCCCCeeeCC--CCCeEEeeccCccc
Q 006903 465 ------------REDGIAHGNLKSNNILFNN--NMEPCISEYGLIVT 497 (626)
Q Consensus 465 ------------~~~~ivHrDlkp~NILl~~--~~~~kl~DFGl~~~ 497 (626)
....++|+|++|.||+++. ++.+.|.||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 0245799999999999998 56678999987643
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.2e-11 Score=128.52 Aligned_cols=239 Identities=19% Similarity=0.214 Sum_probs=164.7
Q ss_pred cccccCCCcceEEEEe--CCCcEEEEEEcCCCCCC-HHH--HHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL--DDGLMLAVKRLRDWSIS-SED--FKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~~~-~~~--~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
..||.|.|+.||+... .++..+++|.+.+.... ..+ -..|+.+...+ .|.+++.....+...+..|+--||+.+
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~ 350 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEG 350 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcC
Confidence 5799999999999874 46889999988765422 122 23455554444 488888887777777778899999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC-CCeEEeeccCccccCCC-cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN-MEPCISEYGLIVTENHD-QS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGl~~~~~~~-~~ 503 (626)
+++..... -...++...++++..+++.++.++| ++.++|+|+||+||++..+ +.-++.|||.+...... ..
T Consensus 351 ~s~~l~~~---~~~~~d~~~~~~~~~q~~~~l~~i~----s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~ 423 (524)
T KOG0601|consen 351 GSSSLRSV---TSQMLDEDPRLRLTAQILTALNVIH----SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGV 423 (524)
T ss_pred cchhhhhH---HHHhcCcchhhhhHHHHHhcccccc----chhhhcccccccceeeccchhhhhccccccccccceeccc
Confidence 98877662 2346777889999999999999999 7899999999999999986 77889999987532111 11
Q ss_pred cccccccc-chhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSL-KINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~-~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
.......| .++.......+..++|+||||..+.|.+++......+.. |.... ... . .. .....
T Consensus 424 ~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~-~~~-~--------p~---~~~~~ 487 (524)
T KOG0601|consen 424 FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIR-SGD-T--------PN---LPGLK 487 (524)
T ss_pred ccccccccccchhhccccccccccccccccccccccccCcccCccccc---ceeee-ccc-c--------cC---CCchH
Confidence 12222233 244455555667899999999999999999865433221 11100 000 0 00 01111
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
..+..+.......++..||.+.+...+.+..
T Consensus 488 ~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 488 LQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred HhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 3455566678889999999998887655543
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.2e-10 Score=105.46 Aligned_cols=137 Identities=12% Similarity=0.146 Sum_probs=95.6
Q ss_pred cccccCCCcceEEEEeCC-------CcEEEEEEcCCCCC----------------------C-HHHH----HHHHHHhcc
Q 006903 352 ELLGRGKHGSLYRVVLDD-------GLMLAVKRLRDWSI----------------------S-SEDF----KNRMQKIDH 397 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~-------g~~vAvK~l~~~~~----------------------~-~~~~----~~ei~~l~~ 397 (626)
..||.|.=+.||.|.-.+ +..+|||+.+.... + .+.+ .+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998543 57999997742110 0 1122 378888888
Q ss_pred CCCC--CccccceEEEeCCeEEEEEeecCCCChhH-hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccC
Q 006903 398 VKHP--NVLPPLAYYCSKQEKLLVYEYQPNGSLFN-LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNL 474 (626)
Q Consensus 398 l~H~--nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDl 474 (626)
+..- ++.+++++ ...++||||+.++.+.. .++. ..++......+..++..+|.++++ ..||||+||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 7543 34444443 56789999997654422 2321 124444566778999999999932 579999999
Q ss_pred CCCCeeeCCCCCeEEeeccCccccCC
Q 006903 475 KSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 475 kp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
++.|||+++ +.+.+.|||.+....+
T Consensus 152 s~~NIL~~~-~~v~iIDF~qav~~~h 176 (197)
T cd05146 152 SEYNMLWHD-GKVWFIDVSQSVEPTH 176 (197)
T ss_pred CHHHEEEEC-CcEEEEECCCceeCCC
Confidence 999999974 6799999998866543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.09 E-value=1e-11 Score=130.76 Aligned_cols=134 Identities=30% Similarity=0.455 Sum_probs=99.3
Q ss_pred CeEEEEEecCCCcee-ccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhh-hcCCCCCe
Q 006903 73 KSVRKIVLDGFNLSG-ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSL-SKLNNLKR 150 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g-~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~-~~l~~L~~ 150 (626)
++++++++..|+|.. .|| +.++.+..|+.||||+|++. ..|..+.+.+++-.|+||+|++. +||.++ -+|+.|-+
T Consensus 78 p~LRsv~~R~N~LKnsGiP-~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLf 154 (1255)
T KOG0444|consen 78 PRLRSVIVRDNNLKNSGIP-TDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLF 154 (1255)
T ss_pred hhhHHHhhhccccccCCCC-chhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhh
Confidence 346667777888753 244 36888888888888888888 67888888888888888888887 677664 57888888
Q ss_pred EEccCCcCCccCCCccCcCCCcEEEcCCCccc----ccCCC---------------------C--CCCCccEEEccCCcC
Q 006903 151 LDISNNNFSSELPDLSRISGLLTFFAENNQLR----GGIPE---------------------F--DFSNLLQFNVSNNNL 203 (626)
Q Consensus 151 L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~----g~ip~---------------------~--~~~~L~~l~ls~N~l 203 (626)
||||+|.+...+|.+..+..|++|.|++|.|. .++|. . .+.+|..+|+|.|+|
T Consensus 155 LDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~L 234 (1255)
T KOG0444|consen 155 LDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNL 234 (1255)
T ss_pred hccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCC
Confidence 88888888887777888888888888888653 23343 1 245667777777777
Q ss_pred CCCCCCC
Q 006903 204 SGPVPGV 210 (626)
Q Consensus 204 ~g~ip~~ 210 (626)
. .+|..
T Consensus 235 p-~vPec 240 (1255)
T KOG0444|consen 235 P-IVPEC 240 (1255)
T ss_pred C-cchHH
Confidence 4 44544
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=7.9e-10 Score=119.00 Aligned_cols=164 Identities=20% Similarity=0.225 Sum_probs=119.0
Q ss_pred eCCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHH
Q 006903 367 LDDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGS 445 (626)
Q Consensus 367 ~~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~ 445 (626)
..++.+|.|...+.... ..+...+-++.|+.+|||||++++..+..++..|||+|-+. .|..++.. +....
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~~~~ 105 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LGKEE 105 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hHHHH
Confidence 55688888887765443 22456788889999999999999999999999999999874 57777753 22334
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---cccccccccchhhccccCCC
Q 006903 446 RLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---SFLAQTSSLKINDISNQMCS 522 (626)
Q Consensus 446 ~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~~~~~~~~~~~pe~~~~~~~ 522 (626)
..--+.||+.||.|||+ +.+++|++|.-+.|+++..|+.||++|-++....... ........+..|+.....
T Consensus 106 v~~Gl~qIl~AL~FL~~---d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s-- 180 (690)
T KOG1243|consen 106 VCLGLFQILAALSFLND---DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS-- 180 (690)
T ss_pred HHHHHHHHHHHHHHHhc---cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCcc--
Confidence 45567899999999996 4579999999999999999999999998764322211 111111122223222111
Q ss_pred CCcchhHHHHHHHHHHHcCCC
Q 006903 523 TIKADVYGFGVILLELLTGKL 543 (626)
Q Consensus 523 ~~k~DVwSfGvvl~elltg~~ 543 (626)
+-..|.|-|||+++|++.|..
T Consensus 181 ~~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 181 EWSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred ccchhhhhHHHHHHHHhCccc
Confidence 124699999999999999943
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.2e-09 Score=100.51 Aligned_cols=130 Identities=22% Similarity=0.353 Sum_probs=100.0
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEc-CCCCCC--------HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRL-RDWSIS--------SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l-~~~~~~--------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
..+++|+=+.+|.+.+. |..+.+|.= .+.-.. .+.-.+|.+++.+++--.|....=|..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999764 344566632 222221 13456889999888766666666677888889999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
+++-.|.+.+... +..++..+-.-+.-|| ..||||+||.++||++..+. +.+.|||++..
T Consensus 81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH----~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA----------RPDLLREVGRLVGKLH----KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc----------chHHHHHHHHHHHHHH----hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999898532 3567778888889999 78999999999999998765 99999999864
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.2e-11 Score=127.62 Aligned_cols=130 Identities=20% Similarity=0.227 Sum_probs=97.0
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.+..|+|+.|++...- .+.+..++.|+.|+||+|.+...-+..+.-+.+|+.|+||+|+++---|.+|.-|.+|++|+|
T Consensus 270 kme~l~L~~N~l~~vn-~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnL 348 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVN-EGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNL 348 (873)
T ss_pred ccceeecccchhhhhh-cccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcc
Confidence 4666778878776433 246778888888888888888888888888888888888888888555566777777888888
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC-----CCCCccEEEccCCcCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF-----DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~-----~~~~L~~l~ls~N~l~ 204 (626)
++|.++-.-.. |..+++|++|||++|.+++.|-+. .+++|+.|++-+|++.
T Consensus 349 s~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk 405 (873)
T KOG4194|consen 349 SHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK 405 (873)
T ss_pred cccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee
Confidence 88877655443 666777888888888888777653 3667777777777775
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.03 E-value=7.7e-12 Score=112.04 Aligned_cols=135 Identities=21% Similarity=0.378 Sum_probs=117.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccc-cccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS-GNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~-g~ip~~~~~l~~L~~L 151 (626)
..+..|++.+|++.. +| .+++.++.|+.|+++-|.+. .+|..|+.++.|+.|||++|+++ -.+|..|..|..|+.|
T Consensus 56 ~nlevln~~nnqie~-lp-~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlral 132 (264)
T KOG0617|consen 56 KNLEVLNLSNNQIEE-LP-TSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRAL 132 (264)
T ss_pred hhhhhhhcccchhhh-cC-hhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHH
Confidence 356778999999975 44 37999999999999999998 68999999999999999999996 4688889999999999
Q ss_pred EccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCC
Q 006903 152 DISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 152 ~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
+|+.|.|.-.+|.++++++|+.|.+.+|.|- ++|.. .+..|+.|.+.+|.|+ .+|..++
T Consensus 133 yl~dndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~-vlppel~ 193 (264)
T KOG0617|consen 133 YLGDNDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELA 193 (264)
T ss_pred HhcCCCcccCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee-ecChhhh
Confidence 9999999988888999999999999999987 45654 5888999999999998 4454443
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=3e-09 Score=120.93 Aligned_cols=174 Identities=18% Similarity=0.340 Sum_probs=117.8
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCc--------------ccEEecCCC--------------
Q 006903 21 KSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKW--------------VGVTCDSRQ-------------- 72 (626)
Q Consensus 21 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~c~~~w--------------~gv~c~~~~-------------- 72 (626)
...+..+|...+++..+.+..+........+|+..+|+|-..= ..|.|....
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~~~ 136 (754)
T PRK15370 57 PETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQASS 136 (754)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCCCccccccccccccccc
Confidence 4556678888999888888654322222345888888883211 135663221
Q ss_pred -----------------------------------------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCc
Q 006903 73 -----------------------------------------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIA 111 (626)
Q Consensus 73 -----------------------------------------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~ 111 (626)
...+.|+|++++|+. +|. .+ .++|+.|+|++|+|+
T Consensus 137 ~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lts-LP~-~I--p~~L~~L~Ls~N~Lt 212 (754)
T PRK15370 137 ASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTT-IPA-CI--PEQITTLILDNNELK 212 (754)
T ss_pred CCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCc-CCc-cc--ccCCcEEEecCCCCC
Confidence 125678888888774 332 22 356888888888888
Q ss_pred ccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCCC
Q 006903 112 GTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDF 190 (626)
Q Consensus 112 g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~~ 190 (626)
.+|..+. .+|+.|+|++|+|+ .+|..+. .+|+.|+|++|+++ .+|. +. ++|+.|++++|+|+ .+|....
T Consensus 213 -sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~ 282 (754)
T PRK15370 213 -SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP 282 (754)
T ss_pred -cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC
Confidence 4776654 57888888888887 5777654 46888888888887 4554 33 46888888888887 4676555
Q ss_pred CCccEEEccCCcCCCCCCC
Q 006903 191 SNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 191 ~~L~~l~ls~N~l~g~ip~ 209 (626)
++|+.|++++|+|++ +|.
T Consensus 283 ~sL~~L~Ls~N~Lt~-LP~ 300 (754)
T PRK15370 283 EELRYLSVYDNSIRT-LPA 300 (754)
T ss_pred CCCcEEECCCCcccc-Ccc
Confidence 678888888888874 443
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.8e-10 Score=126.77 Aligned_cols=126 Identities=27% Similarity=0.413 Sum_probs=78.2
Q ss_pred CeEEEEEecCCCceeccC-ccccC--------------CCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccc
Q 006903 73 KSVRKIVLDGFNLSGILD-TTSVC--------------KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN 137 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~-~~~~~--------------~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 137 (626)
..++.|+|++|+|++..+ +..+. ...+|+.|+|++|+|++ +|... .+|+.|++++|+|+ .
T Consensus 302 ~~L~~LdLS~N~L~~Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls~-LP~lp---~~L~~L~Ls~N~L~-~ 376 (788)
T PRK15387 302 PGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLAS-LPTLP---SELYKLWAYNNRLT-S 376 (788)
T ss_pred cccceeECCCCccccCCCCcccccccccccCccccccccccccceEecCCCccCC-CCCCC---cccceehhhccccc-c
Confidence 467777777777766311 01111 11368899999999985 66533 45667777777777 3
Q ss_pred cChhhhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCCCCC
Q 006903 138 LPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 138 ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
+|.. ..+|+.|+|++|+|++ +|.. .++|..|++++|+|++ +|.. ..+|+.|++++|+|+ .+|..+.
T Consensus 377 LP~l---~~~L~~LdLs~N~Lt~-LP~l--~s~L~~LdLS~N~Lss-IP~l-~~~L~~L~Ls~NqLt-~LP~sl~ 442 (788)
T PRK15387 377 LPAL---PSGLKELIVSGNRLTS-LPVL--PSELKELMVSGNRLTS-LPML-PSGLLSLSVYRNQLT-RLPESLI 442 (788)
T ss_pred Cccc---ccccceEEecCCcccC-CCCc--ccCCCEEEccCCcCCC-CCcc-hhhhhhhhhccCccc-ccChHHh
Confidence 6653 2467777777777775 4432 2457777777777764 5542 345666777777766 5665543
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.4e-09 Score=112.66 Aligned_cols=140 Identities=20% Similarity=0.212 Sum_probs=111.9
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|+|++|.|+..- ...+-++++|+.++|.+|.++ .||........|+.|+|.+|.++..-.++++.++.|+.||
T Consensus 78 ~~t~~LdlsnNkl~~id-~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslD 155 (873)
T KOG4194|consen 78 SQTQTLDLSNNKLSHID-FEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLD 155 (873)
T ss_pred cceeeeeccccccccCc-HHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhh
Confidence 35778999999998654 346789999999999999998 5898777777799999999999876677899999999999
Q ss_pred ccCCcCCccC-CCccCcCCCcEEEcCCCcccccCC-C-CCCCCccEEEccCCcCCCCCCCCCCCC
Q 006903 153 ISNNNFSSEL-PDLSRISGLLTFFAENNQLRGGIP-E-FDFSNLLQFNVSNNNLSGPVPGVNGRL 214 (626)
Q Consensus 153 ls~N~l~g~~-p~~~~~~~L~~l~l~~N~l~g~ip-~-~~~~~L~~l~ls~N~l~g~ip~~~~~~ 214 (626)
||.|.++-.. |.+..-.++.+|+|++|.++..=- . ..+.+|..|.|+.|+++--.+..+.++
T Consensus 156 LSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L 220 (873)
T KOG4194|consen 156 LSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRL 220 (873)
T ss_pred hhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhc
Confidence 9999998643 347777889999999999873211 1 146788999999999985555544433
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.5e-10 Score=116.56 Aligned_cols=82 Identities=28% Similarity=0.378 Sum_probs=45.6
Q ss_pred EEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEcc
Q 006903 75 VRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDIS 154 (626)
Q Consensus 75 v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls 154 (626)
|+.++++.|+|.. +|. .+..+..+++.-+.+|+.-+-+|..++.+++|+.|+|++|-+. .+|.+++.+..|+.||||
T Consensus 390 Vt~VnfskNqL~e-lPk-~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS 466 (565)
T KOG0472|consen 390 VTSVNFSKNQLCE-LPK-RLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLS 466 (565)
T ss_pred eEEEecccchHhh-hhh-hhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheeccc
Confidence 8899999999864 332 2222333322222223333355555666666666666666555 556666666666666666
Q ss_pred CCcCC
Q 006903 155 NNNFS 159 (626)
Q Consensus 155 ~N~l~ 159 (626)
+|+|-
T Consensus 467 ~NrFr 471 (565)
T KOG0472|consen 467 FNRFR 471 (565)
T ss_pred ccccc
Confidence 66553
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.3e-08 Score=99.36 Aligned_cols=149 Identities=15% Similarity=0.104 Sum_probs=104.6
Q ss_pred chhhhhcccccccccCCCcceEEEEeCCCcEEEEEEcCCCCC------------CHHHHHHHHHHhccCCCCCcc--ccc
Q 006903 342 KFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI------------SSEDFKNRMQKIDHVKHPNVL--PPL 407 (626)
Q Consensus 342 ~~~~l~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~------------~~~~~~~ei~~l~~l~H~nIv--~l~ 407 (626)
+|+.+....++++-+-....|++..+ +|+.+.||+...... ....+.+|.+.+.++...+|. .++
T Consensus 18 ~f~~~~~~~~e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pV 96 (268)
T PRK15123 18 PFEEVKTLQGEVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGV 96 (268)
T ss_pred cHHHHHhcCCcEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCee
Confidence 34555444556666555566777766 477899997643221 112478898888877544443 335
Q ss_pred eEEEe-----CCeEEEEEeecCCC-ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee
Q 006903 408 AYYCS-----KQEKLLVYEYQPNG-SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF 481 (626)
Q Consensus 408 g~~~~-----~~~~~lv~Ey~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl 481 (626)
++... ....++|||++++- +|.+++.... ....+...+..++.+++..+.-|| ..||+|+|++++|||+
T Consensus 97 a~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH----~~Gi~HgDL~~~NiLl 171 (268)
T PRK15123 97 AFGERGSNPATRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMH----AAGINHRDCYICHFLL 171 (268)
T ss_pred EEEEecCCCccceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHH----HCcCccCCCChhhEEE
Confidence 55543 23478999999986 7998884211 123455677789999999999999 6899999999999999
Q ss_pred CC-------CCCeEEeeccCcc
Q 006903 482 NN-------NMEPCISEYGLIV 496 (626)
Q Consensus 482 ~~-------~~~~kl~DFGl~~ 496 (626)
+. +..+.++||+.+.
T Consensus 172 ~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 172 HLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eccccCCCCCceEEEEECCccc
Confidence 85 4678999999764
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.9e-08 Score=92.14 Aligned_cols=140 Identities=16% Similarity=0.302 Sum_probs=103.1
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEc-CCCCC--------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRL-RDWSI--------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l-~~~~~--------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
+++-+|+-+.|+++.+. |+...||.- .+... .....++|.+.+.+++--.|.-..-++.+...-.|+|||
T Consensus 13 ~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~ 91 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF 91 (229)
T ss_pred eeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence 67889999999999885 777777743 22221 234577899999888766666666677777788899999
Q ss_pred cCC-CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC---CeEEeeccCccc
Q 006903 423 QPN-GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM---EPCISEYGLIVT 497 (626)
Q Consensus 423 ~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGl~~~ 497 (626)
+++ -++.+++.........+ ......+..|-+.+.-|| .++|+|+||..+||++..++ .+.+.|||++..
T Consensus 92 ~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH----~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 92 IDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLH----DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred ccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhh----hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 976 47888876432222222 222678888999999999 78999999999999997654 357999999643
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.6e-09 Score=118.25 Aligned_cols=58 Identities=38% Similarity=0.588 Sum_probs=33.4
Q ss_pred CCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCC
Q 006903 146 NNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 146 ~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~ 209 (626)
.+|+.|||++|+|++ +|.+ ..+|..|++++|+|++ +|.. .++|+.|++++|.|++ +|.
T Consensus 342 ~~Lq~LdLS~N~Ls~-LP~l--p~~L~~L~Ls~N~L~~-LP~l-~~~L~~LdLs~N~Lt~-LP~ 399 (788)
T PRK15387 342 SGLQELSVSDNQLAS-LPTL--PSELYKLWAYNNRLTS-LPAL-PSGLKELIVSGNRLTS-LPV 399 (788)
T ss_pred cccceEecCCCccCC-CCCC--Ccccceehhhcccccc-Cccc-ccccceEEecCCcccC-CCC
Confidence 367788888888875 3432 2345556666666653 4432 3456666666666653 443
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.3e-09 Score=99.02 Aligned_cols=117 Identities=26% Similarity=0.411 Sum_probs=49.0
Q ss_pred eEEEEEecCCCceeccCccccC-CCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhh-hcCCCCCeE
Q 006903 74 SVRKIVLDGFNLSGILDTTSVC-KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSL-SKLNNLKRL 151 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~-~~l~~L~~L 151 (626)
+++.|+|++|+++-. . .+. .+.+|+.|+|++|.++. ++ .+..++.|++|+|++|+++ .+++.+ ..+++|+.|
T Consensus 20 ~~~~L~L~~n~I~~I-e--~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 20 KLRELNLRGNQISTI-E--NLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQEL 93 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EE
T ss_pred ccccccccccccccc-c--chhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEE
Confidence 578899999998743 2 344 57889999999999985 44 5888999999999999998 566666 469999999
Q ss_pred EccCCcCCcc--CCCccCcCCCcEEEcCCCcccccCCCC------CCCCccEEE
Q 006903 152 DISNNNFSSE--LPDLSRISGLLTFFAENNQLRGGIPEF------DFSNLLQFN 197 (626)
Q Consensus 152 ~ls~N~l~g~--~p~~~~~~~L~~l~l~~N~l~g~ip~~------~~~~L~~l~ 197 (626)
+|++|++... +-.+..+++|+.|++.+|.++.. +.. .+++|+.||
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEET
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeC
Confidence 9999999753 33477888899999999988743 332 377788776
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.6e-09 Score=120.35 Aligned_cols=120 Identities=21% Similarity=0.375 Sum_probs=80.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|+|++|+|+. +|. .+ ..+|+.|+|++|++. .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+
T Consensus 220 ~nL~~L~Ls~N~Lts-LP~-~l--~~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~ 289 (754)
T PRK15370 220 GNIKTLYANSNQLTS-IPA-TL--PDTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLS 289 (754)
T ss_pred cCCCEEECCCCcccc-CCh-hh--hccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEE
Confidence 357889999999884 443 22 346888888888887 6777664 47888888888887 5777664 5788888
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g 205 (626)
|++|+|++..+.+. ++|+.|++++|+|++ +|....++|+.|++++|.|++
T Consensus 290 Ls~N~Lt~LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~~sL~~L~Ls~N~Lt~ 339 (754)
T PRK15370 290 VYDNSIRTLPAHLP--SGITHLNVQSNSLTA-LPETLPPGLKTLEAGENALTS 339 (754)
T ss_pred CCCCccccCcccch--hhHHHHHhcCCcccc-CCccccccceeccccCCcccc
Confidence 88888876432232 356666666666663 444334556666666666654
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.1e-09 Score=122.84 Aligned_cols=236 Identities=17% Similarity=0.176 Sum_probs=154.8
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+-+-+|.++.++-+.- ..|...++|....... ..+....+-.++-..+||-++....-+......+|+++|..++
T Consensus 810 ~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~ 889 (1205)
T KOG0606|consen 810 KPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGG 889 (1205)
T ss_pred ccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccC
Confidence 3677888998887763 3355555554433221 1122333333444455677777665555567789999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC-------
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN------- 499 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~------- 499 (626)
+|...|+... ..+..-.......+..+++||| ...++|||+||.|+|...++..+++|||+.....
T Consensus 890 ~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~----s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~ 962 (1205)
T KOG0606|consen 890 DLPSKLHNSG---CLSAEPARSPILERVQSLESLH----SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTD 962 (1205)
T ss_pred CchhhhhcCC---CcccccccchhHHHHhhhhccc----cchhhcccccccchhhcccCCcccCccccccccccccCcCC
Confidence 9999997532 3343334445566778999999 4558999999999999999999999998421100
Q ss_pred C-----------------------C----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchh
Q 006903 500 H-----------------------D----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLA 552 (626)
Q Consensus 500 ~-----------------------~----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~ 552 (626)
. + .....+++.|.+||...+......+|+|++|++++|.++|.+||.....-
T Consensus 963 ~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq- 1041 (1205)
T KOG0606|consen 963 LSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ- 1041 (1205)
T ss_pred cccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh-
Confidence 0 0 11234577888999988888899999999999999999999998754322
Q ss_pred HHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHH
Q 006903 553 TWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMN 604 (626)
Q Consensus 553 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 604 (626)
+.++.+.... +.......+......+++...+..+|.+|-.|.
T Consensus 1042 ~~f~ni~~~~---------~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1042 QIFENILNRD---------IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhhccccCC---------CCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 2222222111 111112223333455666677788888886654
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.9e-08 Score=94.08 Aligned_cols=126 Identities=23% Similarity=0.333 Sum_probs=81.1
Q ss_pred ceEEEEeCCCcEEEEEEcCCCCC----------------------C-----HHHHHHHHHHhccCCCCC--ccccceEEE
Q 006903 361 SLYRVVLDDGLMLAVKRLRDWSI----------------------S-----SEDFKNRMQKIDHVKHPN--VLPPLAYYC 411 (626)
Q Consensus 361 ~Vy~~~~~~g~~vAvK~l~~~~~----------------------~-----~~~~~~ei~~l~~l~H~n--Iv~l~g~~~ 411 (626)
.||.|...+|..+|||..+.... . .....+|.+.|.++..-+ +.+++.+
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 38999998999999998743110 0 123578999999987664 4444433
Q ss_pred eCCeEEEEEeecC--CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEE
Q 006903 412 SKQEKLLVYEYQP--NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCI 489 (626)
Q Consensus 412 ~~~~~~lv~Ey~~--~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl 489 (626)
...++||||++ +..+..+... .++......++.++...+..+++ ..||||+||.+.|||++++ .+.+
T Consensus 79 --~~~~ivME~I~~~G~~~~~l~~~-----~~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPRLKDV-----DLSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp --ETTEEEEE--EETTEEGGCHHHC-----GGGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE
T ss_pred --eCCEEEEEecCCCccchhhHHhc-----cccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEE
Confidence 24579999998 5445443321 11123455677777776666542 6799999999999999988 8999
Q ss_pred eeccCccccC
Q 006903 490 SEYGLIVTEN 499 (626)
Q Consensus 490 ~DFGl~~~~~ 499 (626)
.|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999876543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.3e-09 Score=108.10 Aligned_cols=70 Identities=23% Similarity=0.261 Sum_probs=55.1
Q ss_pred cEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeec-ccc
Q 006903 65 GVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGR-NKL 134 (626)
Q Consensus 65 gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~-N~l 134 (626)
-|.|+..+ ...+.|+|+.|+++- ||+..+..+.+|+.||||+|+|+-.-|..|..+.+|..|-+-+ |++
T Consensus 50 ~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~-iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 50 IVDCRGKGLTEVPANLPPETVEIRLDQNQISS-IPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred eEEccCCCcccCcccCCCcceEEEeccCCccc-CChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 36776542 357899999999985 6667899999999999999999988888888777776665544 666
Q ss_pred c
Q 006903 135 S 135 (626)
Q Consensus 135 ~ 135 (626)
+
T Consensus 129 ~ 129 (498)
T KOG4237|consen 129 T 129 (498)
T ss_pred h
Confidence 5
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.79 E-value=8.5e-10 Score=121.81 Aligned_cols=125 Identities=25% Similarity=0.379 Sum_probs=96.0
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCc-cccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQ-EISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.++.|.|.+|.|+...-+ .+-+..+|++|+|++|+|. .+|. .+.++..|+.|+||+|+|+ .+|+.+.++..|++|.
T Consensus 360 ~Lq~LylanN~Ltd~c~p-~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ 436 (1081)
T KOG0618|consen 360 ALQELYLANNHLTDSCFP-VLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLR 436 (1081)
T ss_pred HHHHHHHhcCcccccchh-hhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHh
Confidence 567788888888776543 5677888888888888887 4554 4678888888888888887 7888888888888888
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccc-cCCCCC-CCCccEEEccCCc
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRG-GIPEFD-FSNLLQFNVSNNN 202 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g-~ip~~~-~~~L~~l~ls~N~ 202 (626)
..+|++.- +|.+.+++.|+.+|++.|+|+- .+|... -++|++||+++|.
T Consensus 437 ahsN~l~~-fPe~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 437 AHSNQLLS-FPELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hcCCceee-chhhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 88888864 5588888888888888888873 444432 2688888888886
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.4e-07 Score=97.22 Aligned_cols=167 Identities=24% Similarity=0.318 Sum_probs=125.1
Q ss_pred CcceEEEE-eCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEe----CCeEEEEEeecCC-CChhHh
Q 006903 359 HGSLYRVV-LDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCS----KQEKLLVYEYQPN-GSLFNL 431 (626)
Q Consensus 359 fG~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~----~~~~~lv~Ey~~~-g~L~~~ 431 (626)
-.+.||+. ..||..|++|+++... ........-++..+++.|+|+|++..++.+ +...++||+|.|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 45679998 5689999999995432 233344456788899999999999998874 3457999999986 577776
Q ss_pred hcCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 432 LHGSE------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 432 l~~~~------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
-.... .+...++...+.++.|+..||.++| +.|+.-+-|.+.+||++.+.+++|+..|+.....
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH----ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH----SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH----hcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 53211 1234677899999999999999999 6789889999999999999999998888754332
Q ss_pred CCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCC
Q 006903 500 HDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKL 543 (626)
Q Consensus 500 ~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~ 543 (626)
.+. + +.+. .-.+-|.=.||.+++.|.||..
T Consensus 445 ~d~----~-------~~le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDP----T-------EPLE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCC----C-------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence 222 0 0111 1236799999999999999964
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.1e-10 Score=112.88 Aligned_cols=126 Identities=27% Similarity=0.391 Sum_probs=82.6
Q ss_pred EEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEcc
Q 006903 75 VRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDIS 154 (626)
Q Consensus 75 v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls 154 (626)
|+.+.+++|.++ +++..++.++.|+.|+|++|-+. .+|.+++.+..|+.||||.|+|. .+|..+..+..|+++-.+
T Consensus 414 vT~l~lsnn~is--fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas 489 (565)
T KOG0472|consen 414 VTDLVLSNNKIS--FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLAS 489 (565)
T ss_pred HHHHHhhcCccc--cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhc
Confidence 444556555553 22345677777777777766666 47777777777777777777776 567666666666666666
Q ss_pred CCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCC
Q 006903 155 NNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 155 ~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~ 204 (626)
+|++...-|. +.++.+|.+||+.+|.+.-..|.. .|.+|++|++++|.|.
T Consensus 490 ~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 490 NNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 6776655555 677777777777777776333332 5777777777777775
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.74 E-value=8.2e-09 Score=79.12 Aligned_cols=61 Identities=36% Similarity=0.511 Sum_probs=48.5
Q ss_pred CCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcC
Q 006903 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158 (626)
Q Consensus 98 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l 158 (626)
++|+.|+|++|+++..-+..|.++++|++|+|++|+++..-|..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4678888888888865556778888888888888888866666788888888888888875
|
... |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.4e-09 Score=117.19 Aligned_cols=136 Identities=25% Similarity=0.310 Sum_probs=110.4
Q ss_pred CCCCCCCCcccEEecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecccc
Q 006903 55 SSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKL 134 (626)
Q Consensus 55 ~~~~c~~~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 134 (626)
-+|.| |.-+.|. .+++.|+|+.|.|. .+|...+.++..|+.|+||+|.++ ++|..+.+|..|++|...+|++
T Consensus 371 Ltd~c---~p~l~~~---~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l 442 (1081)
T KOG0618|consen 371 LTDSC---FPVLVNF---KHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQL 442 (1081)
T ss_pred ccccc---hhhhccc---cceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCce
Confidence 37888 7777775 47999999999997 466667889999999999999999 6999999999999999999999
Q ss_pred ccccChhhhcCCCCCeEEccCCcCCc-cCCCccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCC
Q 006903 135 SGNLPDSLSKLNNLKRLDISNNNFSS-ELPDLSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNN 201 (626)
Q Consensus 135 ~g~ip~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N 201 (626)
. .+| ++.++++|+.+|||.|+++- .+|.....++|++||+++|.= +.+... .++.+..+++.-|
T Consensus 443 ~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~-l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 443 L-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR-LVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred e-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc-cccchhhhHHhhhhhheecccC
Confidence 8 678 89999999999999999984 456655558999999999962 122221 2455666666655
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.67 E-value=5.6e-09 Score=108.50 Aligned_cols=132 Identities=24% Similarity=0.314 Sum_probs=92.1
Q ss_pred CeEEEEEecCCCceeccCccccCCC---CCccEEEcccCCCcc----cCCccccCC-CCCcEEEeeccccccc----cCh
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKT---QSLVVLSLEENNIAG----TVSQEISNC-KQLTHLYVGRNKLSGN----LPD 140 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l---~~L~~L~ls~N~l~g----~~p~~~~~l-~~L~~L~l~~N~l~g~----ip~ 140 (626)
.+++.|+|+++.+.+..+. .+..+ ++|+.|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++.
T Consensus 81 ~~L~~L~l~~~~~~~~~~~-~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 81 CGLQELDLSDNALGPDGCG-VLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred CceeEEEccCCCCChhHHH-HHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 5788889988888754332 23333 348889999888873 233445566 7888999999988843 344
Q ss_pred hhhcCCCCCeEEccCCcCCcc----CC-CccCcCCCcEEEcCCCcccccCCC------CCCCCccEEEccCCcCCC
Q 006903 141 SLSKLNNLKRLDISNNNFSSE----LP-DLSRISGLLTFFAENNQLRGGIPE------FDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 141 ~~~~l~~L~~L~ls~N~l~g~----~p-~~~~~~~L~~l~l~~N~l~g~ip~------~~~~~L~~l~ls~N~l~g 205 (626)
.+..++.|+.|+|++|++++. ++ .+...++|+.|++++|.+++.-.. ..+++|+.|++++|.+++
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 566778888999999888853 12 245557888899988888643221 136788888988888775
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.8e-07 Score=113.33 Aligned_cols=142 Identities=20% Similarity=0.267 Sum_probs=94.1
Q ss_pred cccEEecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhh
Q 006903 63 WVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSL 142 (626)
Q Consensus 63 w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~ 142 (626)
|.|+.+ ..+++.|+|++++.-+.+| .++.+++|+.|+|++|..-..+|..++++++|+.|+|++|..-+.+|..+
T Consensus 627 ~~~~~~---l~~Lk~L~Ls~~~~l~~ip--~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i 701 (1153)
T PLN03210 627 WDGVHS---LTGLRNIDLRGSKNLKEIP--DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI 701 (1153)
T ss_pred cccccc---CCCCCEEECCCCCCcCcCC--ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC
Confidence 555432 2467888888776555665 46778888888888887777888888888888888888765555677655
Q ss_pred hcCCCCCeEEccCCcCCccCC--------------------C-c--c----------------------------CcCCC
Q 006903 143 SKLNNLKRLDISNNNFSSELP--------------------D-L--S----------------------------RISGL 171 (626)
Q Consensus 143 ~~l~~L~~L~ls~N~l~g~~p--------------------~-~--~----------------------------~~~~L 171 (626)
++++|+.|+|++|...+.+| . + . ..++|
T Consensus 702 -~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL 780 (1153)
T PLN03210 702 -NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSL 780 (1153)
T ss_pred -CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccccccccccccccccccccccchhhccccccccchhhhhccccc
Confidence 45666666655553322222 1 0 0 01356
Q ss_pred cEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCC
Q 006903 172 LTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGV 210 (626)
Q Consensus 172 ~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~ 210 (626)
+.|++++|...+.+|.. .+++|+.|++++|..-+.+|..
T Consensus 781 ~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~ 821 (1153)
T PLN03210 781 TRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTG 821 (1153)
T ss_pred hheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCC
Confidence 67777777777777764 5778888888877655667754
|
syringae 6; Provisional |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=98.57 E-value=3e-07 Score=111.36 Aligned_cols=109 Identities=20% Similarity=0.284 Sum_probs=46.1
Q ss_pred CCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEc
Q 006903 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFA 176 (626)
Q Consensus 98 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l 176 (626)
.+|+.|+|++|++. .+|..+..+++|+.|+|++|..-+.+|. ++.+++|+.|+|++|.....+|. +.++++|+.|++
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L 688 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDM 688 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeC
Confidence 34444444444443 2344444444444444444433333432 44444444444444443333333 444444444444
Q ss_pred CCCcccccCCCC-CCCCccEEEccCCcCCCCCC
Q 006903 177 ENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 177 ~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip 208 (626)
++|..-+.+|.. .+++|+.|++++|...+.+|
T Consensus 689 ~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p 721 (1153)
T PLN03210 689 SRCENLEILPTGINLKSLYRLNLSGCSRLKSFP 721 (1153)
T ss_pred CCCCCcCccCCcCCCCCCCEEeCCCCCCccccc
Confidence 443333333332 24444444444443333333
|
syringae 6; Provisional |
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.57 E-value=4e-08 Score=91.77 Aligned_cols=107 Identities=25% Similarity=0.380 Sum_probs=38.4
Q ss_pred cCCCCCccEEEcccCCCcccCCcccc-CCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCc-cCcCCC
Q 006903 94 VCKTQSLVVLSLEENNIAGTVSQEIS-NCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDL-SRISGL 171 (626)
Q Consensus 94 ~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~~~L 171 (626)
.-+...++.|+|++|.|+- | ..++ .+.+|+.|+|++|.++ .++ .+..++.|++|+|++|.++..-+.+ ..+++|
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L 90 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNL 90 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT-
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCccccchHHhCCcC
Confidence 3445568999999999984 4 3566 5789999999999998 454 5888999999999999998754444 468899
Q ss_pred cEEEcCCCccccc--C-CCCCCCCccEEEccCCcCC
Q 006903 172 LTFFAENNQLRGG--I-PEFDFSNLLQFNVSNNNLS 204 (626)
Q Consensus 172 ~~l~l~~N~l~g~--i-p~~~~~~L~~l~ls~N~l~ 204 (626)
+.|++++|++... + +-..+++|+.|++.+|.++
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 9999999998742 1 1125888999998888764
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.5e-07 Score=88.58 Aligned_cols=137 Identities=21% Similarity=0.298 Sum_probs=95.0
Q ss_pred hhhcccccccccCCCcceEEEEeCCCcEEEEEEcCCCC-----------------------CCHHHHHHHHHHhccCCCC
Q 006903 345 DLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWS-----------------------ISSEDFKNRMQKIDHVKHP 401 (626)
Q Consensus 345 ~l~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~-----------------------~~~~~~~~ei~~l~~l~H~ 401 (626)
+...+.++.||-|.=+.||.|..+.|.++|||.=+... .+....++|.+.|.++.-.
T Consensus 90 ~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~ 169 (304)
T COG0478 90 GIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE 169 (304)
T ss_pred ChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc
Confidence 34445679999999999999999999999999542110 0123467899999998654
Q ss_pred --CccccceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCe
Q 006903 402 --NVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNI 479 (626)
Q Consensus 402 --nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NI 479 (626)
.+.+.+++ +...+||||+++-.|...-- +-...-.++..|..-+.-+- ..||||+|+.+=||
T Consensus 170 G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r~--------~~en~~~il~~il~~~~~~~----~~GiVHGDlSefNI 233 (304)
T COG0478 170 GVKVPKPIAW----NRHAVVMEYIEGVELYRLRL--------DVENPDEILDKILEEVRKAY----RRGIVHGDLSEFNI 233 (304)
T ss_pred CCCCCCcccc----ccceeeeehcccceeecccC--------cccCHHHHHHHHHHHHHHHH----HcCccccCCchheE
Confidence 56666654 56789999999866654321 11112223333333333222 36899999999999
Q ss_pred eeCCCCCeEEeeccCccc
Q 006903 480 LFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 480 Ll~~~~~~kl~DFGl~~~ 497 (626)
++++++.+.+.||--+..
T Consensus 234 lV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 234 LVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred EEecCCCEEEEeCccccc
Confidence 999999999999976544
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.3e-08 Score=101.85 Aligned_cols=132 Identities=22% Similarity=0.336 Sum_probs=100.4
Q ss_pred CeEEEEEecCCCceec-cC--ccccCCC-CCccEEEcccCCCccc----CCccccCCCCCcEEEeeccccccc----cCh
Q 006903 73 KSVRKIVLDGFNLSGI-LD--TTSVCKT-QSLVVLSLEENNIAGT----VSQEISNCKQLTHLYVGRNKLSGN----LPD 140 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~-~~--~~~~~~l-~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~----ip~ 140 (626)
.+++.|++++|.+++. .+ ...+..+ ++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++. ++.
T Consensus 108 ~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~ 187 (319)
T cd00116 108 SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAE 187 (319)
T ss_pred CcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHH
Confidence 3599999999998741 11 1134455 8899999999999954 344566788999999999999853 455
Q ss_pred hhhcCCCCCeEEccCCcCCccCC----C-ccCcCCCcEEEcCCCcccccCCCC-------CCCCccEEEccCCcCC
Q 006903 141 SLSKLNNLKRLDISNNNFSSELP----D-LSRISGLLTFFAENNQLRGGIPEF-------DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 141 ~~~~l~~L~~L~ls~N~l~g~~p----~-~~~~~~L~~l~l~~N~l~g~ip~~-------~~~~L~~l~ls~N~l~ 204 (626)
.+..+++|+.|+|++|.+++... . +..+++|+.|++++|.+++..... ...+|+.|++++|.++
T Consensus 188 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 188 GLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCC
Confidence 56777899999999999985432 2 567889999999999998621111 2378999999999886
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.1e-08 Score=74.68 Aligned_cols=60 Identities=43% Similarity=0.558 Sum_probs=49.3
Q ss_pred CCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcc
Q 006903 122 KQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQL 181 (626)
Q Consensus 122 ~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l 181 (626)
++|++|+|++|+|+..-+..|..+++|++|+|++|+++...|. +..+++|+.|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4689999999999855446788899999999999999877775 78888888888888764
|
... |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.2e-08 Score=107.38 Aligned_cols=127 Identities=24% Similarity=0.417 Sum_probs=101.9
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|+|+.|+|+-. | ..+|.++ |+.|-+++|+++ .+|..++.+..|..||.+.|.+. .+|++++.+.+|+.|+
T Consensus 121 ~~lt~l~ls~NqlS~l-p-~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~ 195 (722)
T KOG0532|consen 121 EALTFLDLSSNQLSHL-P-DGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLN 195 (722)
T ss_pred hHHHHhhhccchhhcC-C-hhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHH
Confidence 4577888888888743 3 3678887 888889888887 58888888888888899999887 7888888889999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ 206 (626)
+..|++.-.++.+..| .|..||+|.|+++ .||.. .|+.|++|-|.+|.|+.+
T Consensus 196 vrRn~l~~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 196 VRRNHLEDLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSP 249 (722)
T ss_pred HhhhhhhhCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCC
Confidence 9999888777766643 5888999999888 56653 588888888999988744
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.1e-08 Score=107.77 Aligned_cols=127 Identities=25% Similarity=0.396 Sum_probs=92.8
Q ss_pred ccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCCc
Q 006903 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLL 172 (626)
Q Consensus 93 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~ 172 (626)
.++++..|+.|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|+.++.+..|..||.+.|++...++.++.+.+|+
T Consensus 116 ~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr 192 (722)
T KOG0532|consen 116 AICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLR 192 (722)
T ss_pred hhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHH
Confidence 5677777788888888877 5777777776 778888888876 678888877788888888888877666688888888
Q ss_pred EEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCCCCCCCc---ccCCCCCC
Q 006903 173 TFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLG---ADSFSGNP 223 (626)
Q Consensus 173 ~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~~~~~~~---~~~~~gn~ 223 (626)
.|++..|++.-..++...-.|..||+|+|+++ .||..+.++. ...+..||
T Consensus 193 ~l~vrRn~l~~lp~El~~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNP 245 (722)
T KOG0532|consen 193 DLNVRRNHLEDLPEELCSLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNP 245 (722)
T ss_pred HHHHhhhhhhhCCHHHhCCceeeeecccCcee-ecchhhhhhhhheeeeeccCC
Confidence 88888888875444444457889999999987 6787654433 23344554
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.46 E-value=6.7e-07 Score=97.36 Aligned_cols=139 Identities=20% Similarity=0.329 Sum_probs=91.5
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCC---------------------------CH----H----------HHHH
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---------------------------SS----E----------DFKN 390 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---------------------------~~----~----------~~~~ 390 (626)
+-|+.++-|.||+|++++|+.||||+.+..-. .. + ++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 67999999999999999999999998853211 00 0 2344
Q ss_pred HHHHhccCC-----CCCccccceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcc
Q 006903 391 RMQKIDHVK-----HPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465 (626)
Q Consensus 391 ei~~l~~l~-----H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~ 465 (626)
|...+.+++ .+++.-..=|..-.....|+|||++|-.+.+...-.. ..++ +..++..++++.-. +-.
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d---~k~ia~~~~~~f~~--q~~- 282 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGID---RKELAELLVRAFLR--QLL- 282 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCC---HHHHHHHHHHHHHH--HHH-
Confidence 444444432 3443332223333567899999999988888753212 2344 33444444333211 111
Q ss_pred CCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 466 ~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
..|+.|.|..|.||+++.+++..+.|||+....
T Consensus 283 ~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 283 RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred hcCccccCCCccceEEecCCcEEEEcCcceecC
Confidence 358999999999999999999999999996543
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.35 E-value=7.5e-08 Score=93.96 Aligned_cols=103 Identities=20% Similarity=0.329 Sum_probs=71.4
Q ss_pred CCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcC
Q 006903 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAE 177 (626)
Q Consensus 98 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~ 177 (626)
+.|+.||||+|.++ .|-.+..-++.++.|++|+|.+. .+ ..+..|++|+.||||+|.++..--.-.++-+..+|.++
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhHhhhhhHhhhcCEeeeehh
Confidence 45677888888887 56667777788888888888886 33 34778888888888888876543333345566777888
Q ss_pred CCcccccCCC-CCCCCccEEEccCCcCC
Q 006903 178 NNQLRGGIPE-FDFSNLLQFNVSNNNLS 204 (626)
Q Consensus 178 ~N~l~g~ip~-~~~~~L~~l~ls~N~l~ 204 (626)
.|.+... .. ..+-+|..||+++|++.
T Consensus 361 ~N~iE~L-SGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 361 QNKIETL-SGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred hhhHhhh-hhhHhhhhheeccccccchh
Confidence 8776521 11 13556788888888874
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.7e-07 Score=100.19 Aligned_cols=145 Identities=19% Similarity=0.267 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc------------ccccccccchhhccc
Q 006903 451 ACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS------------FLAQTSSLKINDISN 518 (626)
Q Consensus 451 ~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~------------~~~~~~~~~~pe~~~ 518 (626)
.+++.|+.|+|. +.++||++|.|++|.++.++..|++.|+++........ .......|.+||+..
T Consensus 106 ~~v~dgl~flh~---sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 106 GNVADGLAFLHR---SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hcccchhhhhcc---CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 345589999996 67899999999999999999999999998644322111 111234577899888
Q ss_pred cCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCC
Q 006903 519 QMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSP 597 (626)
Q Consensus 519 ~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP 597 (626)
....+.++|+||+||++|-+.. |+..+........+-......+... ...+.+.+.++.+=+.+.+..++
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~---------~~~s~~~p~el~~~l~k~l~~~~ 253 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGA---------FGYSNNLPSELRESLKKLLNGDS 253 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccccc---------ccccccCcHHHHHHHHHHhcCCc
Confidence 8778899999999999999984 5544332211111111111111000 01112233456677778899999
Q ss_pred CCCCCHHHHH
Q 006903 598 NERPSMNQVA 607 (626)
Q Consensus 598 ~~RPs~~ev~ 607 (626)
..||++.++.
T Consensus 254 ~~rp~~~~l~ 263 (700)
T KOG2137|consen 254 AVRPTLDLLL 263 (700)
T ss_pred ccCcchhhhh
Confidence 9999777653
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.1e-07 Score=92.77 Aligned_cols=126 Identities=26% Similarity=0.352 Sum_probs=96.7
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
-++.+||++|.++- ++ .+...++.++.|++|+|.+.- + .++..+.+|+.||||+|.|+ .+-..=.+|-+++.|+|
T Consensus 285 ~LtelDLS~N~I~~-iD-ESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 285 ELTELDLSGNLITQ-ID-ESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhccccccchhh-hh-hhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 37789999998874 33 367778899999999999983 3 34888999999999999997 44444467889999999
Q ss_pred cCCcCCccCCCccCcCCCcEEEcCCCcccccCCC----CCCCCccEEEccCCcCCCC
Q 006903 154 SNNNFSSELPDLSRISGLLTFFAENNQLRGGIPE----FDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 154 s~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~----~~~~~L~~l~ls~N~l~g~ 206 (626)
+.|.+.. +..+.++-+|..||+++|++.- +.+ ..++-|+.+.+-+|.+.+.
T Consensus 360 a~N~iE~-LSGL~KLYSLvnLDl~~N~Ie~-ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 360 AQNKIET-LSGLRKLYSLVNLDLSSNQIEE-LDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhhHhh-hhhhHhhhhheeccccccchhh-HHHhcccccccHHHHHhhcCCCcccc
Confidence 9998742 2337778889999999999862 111 1356677788888888754
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.7e-05 Score=75.85 Aligned_cols=136 Identities=17% Similarity=0.114 Sum_probs=98.2
Q ss_pred cccCCCcceEEEEeCCCcEEEEEEcCCCC-------CCHHHHHHHHHHhccCCCCC--ccccceEEE-eC----CeEEEE
Q 006903 354 LGRGKHGSLYRVVLDDGLMLAVKRLRDWS-------ISSEDFKNRMQKIDHVKHPN--VLPPLAYYC-SK----QEKLLV 419 (626)
Q Consensus 354 lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~-------~~~~~~~~ei~~l~~l~H~n--Iv~l~g~~~-~~----~~~~lv 419 (626)
-|+||-+-|++..+. |..+=+|+-...- .....|.+|+..+.++..-+ +.+.. ++. .. -..+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467888889987765 4468888765211 23467999999998885433 33333 322 11 235799
Q ss_pred EeecCC-CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC--eEEeeccCcc
Q 006903 420 YEYQPN-GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME--PCISEYGLIV 496 (626)
Q Consensus 420 ~Ey~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGl~~ 496 (626)
+|-+++ -+|.+++... .-.+.+...+..+..++++.++-|| ..|+.|+|+-+.||+++.++. +++.||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH----~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMH----SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHH----HCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 997764 5888888532 1234567778899999999999999 689999999999999986666 8999997543
|
|
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.7e-06 Score=91.33 Aligned_cols=141 Identities=18% Similarity=0.195 Sum_probs=89.0
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCC--------------------------------------HHHHHHHHH
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS--------------------------------------SEDFKNRMQ 393 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~--------------------------------------~~~~~~ei~ 393 (626)
+.||.-+.|.||+|++++|+.||||+-+..-.. +-+|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 679999999999999999999999986532110 012445544
Q ss_pred Hhcc----CCCCCc---cccceEEEe-CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcc
Q 006903 394 KIDH----VKHPNV---LPPLAYYCS-KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465 (626)
Q Consensus 394 ~l~~----l~H~nI---v~l~g~~~~-~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~ 465 (626)
-..+ ++|-+. |..-.+|.+ .....|+||||+|..+.+...-.+ ..++...+ +..+.++.. +.-.
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~--~gi~~~~i---~~~l~~~~~--~qIf- 318 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK--RGISPHDI---LNKLVEAYL--EQIF- 318 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH--cCCCHHHH---HHHHHHHHH--HHHH-
Confidence 4333 235441 112223322 356899999999987776543212 23444433 333333222 2111
Q ss_pred CCCceeccCCCCCeeeCC----CCCeEEeeccCccccCC
Q 006903 466 EDGIAHGNLKSNNILFNN----NMEPCISEYGLIVTENH 500 (626)
Q Consensus 466 ~~~ivHrDlkp~NILl~~----~~~~kl~DFGl~~~~~~ 500 (626)
..|++|+|=.|.||+++. +..+.+-|||+.....+
T Consensus 319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred hcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 358999999999999994 67889999999765433
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.24 E-value=4.6e-06 Score=80.96 Aligned_cols=106 Identities=23% Similarity=0.366 Sum_probs=80.5
Q ss_pred HHHHHHHHHHhccCCCCC--ccccceEEEeCC----eEEEEEeecCCC-ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHH
Q 006903 385 SEDFKNRMQKIDHVKHPN--VLPPLAYYCSKQ----EKLLVYEYQPNG-SLFNLLHGSENGQSFDWGSRLRVAACVAKAL 457 (626)
Q Consensus 385 ~~~~~~ei~~l~~l~H~n--Iv~l~g~~~~~~----~~~lv~Ey~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL 457 (626)
.....+|...+..+.... +.+.+++..... ..++|+|++++. +|.+++.... ..+......++.+++..+
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~---~~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE---QLDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc---ccchhhHHHHHHHHHHHH
Confidence 346778888777765333 444556555432 358999999984 7999986321 255567788999999999
Q ss_pred HHHHHhccCCCceeccCCCCCeeeCCCC---CeEEeeccCccc
Q 006903 458 ALIHEELREDGIAHGNLKSNNILFNNNM---EPCISEYGLIVT 497 (626)
Q Consensus 458 ~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGl~~~ 497 (626)
+-|| ..||+|+|+++.|||++.+. .+.+.||+-++.
T Consensus 132 ~~lH----~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 132 AKLH----DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHH----HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999 68999999999999999887 788999987654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.3e-06 Score=60.27 Aligned_cols=40 Identities=43% Similarity=0.835 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCC--CCCCCCCcccEEec
Q 006903 26 EEVKRALVQFMEKLSVGNAARDPNWGWNRS--SDPCSGKWVGVTCD 69 (626)
Q Consensus 26 ~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~--~~~c~~~w~gv~c~ 69 (626)
++|++||++||+.+..++ ...+.+|+.+ ++|| +|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~--~~~l~~W~~~~~~~~C--~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDP--SGVLSSWNPSSDSDPC--SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC---CCCTT--TT--S-CC--CSTTEEE-
T ss_pred cHHHHHHHHHHHhccccc--CcccccCCCcCCCCCe--eeccEEeC
Confidence 568899999999996422 3468899987 7999 69999996
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.3e-06 Score=93.81 Aligned_cols=119 Identities=31% Similarity=0.396 Sum_probs=59.6
Q ss_pred EEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCC-CCcEEEeeccccccccChhhhcCCCCCeEEccCC
Q 006903 78 IVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCK-QLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156 (626)
Q Consensus 78 l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N 156 (626)
+++..+.+...+. .+..++.++.|++.+|+++ .+|+....+. +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 98 l~~~~~~~~~~~~--~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 98 LDLNLNRLRSNIS--ELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeccccccccCch--hhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4444444432221 2333445555555555555 3454455553 5555555555554 44455555555555555555
Q ss_pred cCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCC
Q 006903 157 NFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNN 201 (626)
Q Consensus 157 ~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N 201 (626)
+++...+..+.+++|+.|++++|+++ .+|.. ....|..+.+++|
T Consensus 174 ~l~~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N 219 (394)
T COG4886 174 DLSDLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNN 219 (394)
T ss_pred hhhhhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCC
Confidence 55544333335555555555555555 33332 2333555555555
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.2e-06 Score=60.52 Aligned_cols=36 Identities=42% Similarity=0.663 Sum_probs=22.5
Q ss_pred CCcEEEeeccccccccChhhhcCCCCCeEEccCCcCC
Q 006903 123 QLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFS 159 (626)
Q Consensus 123 ~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~ 159 (626)
+|++|+|++|+|+ .+|+.+++|++|++|+|++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 5666666666666 56666666666666666666665
|
... |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.1e-06 Score=94.22 Aligned_cols=128 Identities=30% Similarity=0.403 Sum_probs=98.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCC-CccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQ-SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
..++.+++.+|+++-..+ ....+. +|+.|++++|++. .+|..++++++|+.|++++|+++ .+|...+.+++|+.|
T Consensus 116 ~~l~~L~l~~n~i~~i~~--~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L 191 (394)
T COG4886 116 TNLTSLDLDNNNITDIPP--LIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNL 191 (394)
T ss_pred cceeEEecCCcccccCcc--ccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhe
Confidence 358899999999885433 355564 8999999999998 57778899999999999999998 788888789999999
Q ss_pred EccCCcCCccCCCccCcCCCcEEEcCCCcccccC-CCCCCCCccEEEccCCcCC
Q 006903 152 DISNNNFSSELPDLSRISGLLTFFAENNQLRGGI-PEFDFSNLLQFNVSNNNLS 204 (626)
Q Consensus 152 ~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~i-p~~~~~~L~~l~ls~N~l~ 204 (626)
++++|+++-..+.+.....|.++.+++|...-.+ +...+.++..+.+++|.+.
T Consensus 192 ~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~ 245 (394)
T COG4886 192 DLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLE 245 (394)
T ss_pred eccCCccccCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceee
Confidence 9999999876555666777888899888532222 2234566666666666654
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.07 E-value=5.3e-05 Score=74.53 Aligned_cols=139 Identities=16% Similarity=0.176 Sum_probs=83.6
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCc--cccceEEEeCCeEEEEEeecCCCC-h
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV--LPPLAYYCSKQEKLLVYEYQPNGS-L 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nI--v~l~g~~~~~~~~~lv~Ey~~~g~-L 428 (626)
..||+|..+.||+.. |..+++|.... ........+|.+.++.+..-.+ .+.+++....+...+|||+++|.+ +
T Consensus 7 ~~i~~G~t~~~y~~~---~~~~VlR~~~~-~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTHK---TGKWMLKLYNP-GFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEec---CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 578999999999842 44677888765 3345667899999988764433 555666666677789999998863 2
Q ss_pred hHhh---------------------cCCCCCCCCCHHHHHH-HHH----------HHHH-HHHHHHHhccCCCceeccCC
Q 006903 429 FNLL---------------------HGSENGQSFDWGSRLR-VAA----------CVAK-ALALIHEELREDGIAHGNLK 475 (626)
Q Consensus 429 ~~~l---------------------~~~~~~~~l~~~~~~~-i~~----------~ia~-gL~ylH~~~~~~~ivHrDlk 475 (626)
...+ |.... .......... +.. .+.. ...+|...-....++|+|+.
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~-~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKC-DTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 1111 11100 0111111000 000 0111 12222211113457899999
Q ss_pred CCCeeeCCCCCeEEeeccCcc
Q 006903 476 SNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 476 p~NILl~~~~~~kl~DFGl~~ 496 (626)
|.||++++++ +.|.||+.+.
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCcEEEcCCC-cEEEechhcC
Confidence 9999999888 9999998753
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.96 E-value=7.9e-05 Score=76.80 Aligned_cols=254 Identities=14% Similarity=0.200 Sum_probs=144.1
Q ss_pred cccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC-HHHHHHHHHHhcc-CCCCCccccceE----E--EeCCe-EEEE
Q 006903 350 PAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS-SEDFKNRMQKIDH-VKHPNVLPPLAY----Y--CSKQE-KLLV 419 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~-~~~~~~ei~~l~~-l~H~nIv~l~g~----~--~~~~~-~~lv 419 (626)
++.-||+|+-+.+|-.- ..+ .| .|+....... +.+. +..|.. -.||-+-.=+.| . -++.. .-+.
T Consensus 15 ~gr~LgqGgea~ly~l~e~~d--~V-AKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVRD--QV-AKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CCccccCCccceeeecchhhc--hh-heeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 45779999999999643 221 23 3555443321 1222 222322 245543321111 0 11222 4466
Q ss_pred EeecCCC-ChhHhhcC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 420 YEYQPNG-SLFNLLHG---SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 420 ~Ey~~~g-~L~~~l~~---~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
|..+++. .+.+++.. ++......|...++++..+|.+.+-|| ..|.+-+|+.++|+|++++..+.+.|--..
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH----~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH----EHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH----hcCCcccccCccceeeecCceEEEEcccce
Confidence 7766653 23444432 233456889999999999999999999 568888999999999999999998874322
Q ss_pred cccCCCccc--cccccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcC-CCCCCCC------cchhHHHHHHhhc
Q 006903 496 VTENHDQSF--LAQTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTG-KLVQNNG------FNLATWVHSVVRE 561 (626)
Q Consensus 496 ~~~~~~~~~--~~~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg-~~p~~~~------~~~~~~~~~~~~~ 561 (626)
........+ -.+...|.+||.-. +..-+...|-|.+||++++++.| +.||.+- .+..+ ..+...
T Consensus 165 qi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E--~~Ia~g 242 (637)
T COG4248 165 QINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE--TDIAHG 242 (637)
T ss_pred eeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch--hhhhcc
Confidence 111111111 24567788888643 22346789999999999999887 7777521 00000 000000
Q ss_pred ccccccccHHH---H--hhhccHHHHHHHHHHHhhccCC--CCCCCCCHHHHHHHHHhhhhc
Q 006903 562 EWTVEVFDEVL---I--AEAASEERMLKLLQVALRCINQ--SPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 562 ~~~~~~~d~~~---~--~~~~~~~~~~~l~~l~~~Cl~~--dP~~RPs~~ev~~~L~~i~~~ 616 (626)
......+... . ......-....+..+..+|+.. ++.-|||++.-+..|..+..+
T Consensus 243 -~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 243 -RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred -eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 0000000000 0 0000011122355555678765 367899999888888777654
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.1e-06 Score=76.62 Aligned_cols=114 Identities=18% Similarity=0.250 Sum_probs=76.9
Q ss_pred cCCCCCccEEEcccCCCcccCCcccc-CCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCCc
Q 006903 94 VCKTQSLVVLSLEENNIAGTVSQEIS-NCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLL 172 (626)
Q Consensus 94 ~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~ 172 (626)
+....+|+..+|++|.|.. +|+.|. ..+.+++|+|++|.++ .+|.++..++.|+.|++++|.|...+..+..+.+|.
T Consensus 49 l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~~l~ 126 (177)
T KOG4579|consen 49 LSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLNAEPRVIAPLIKLD 126 (177)
T ss_pred HhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccccchHHHHHHHhHH
Confidence 3455567777888888874 565554 3457888888888887 788888888888888888888887665566688888
Q ss_pred EEEcCCCcccccCCCCC-CCC-ccEEEccCCcCCCCCCCC
Q 006903 173 TFFAENNQLRGGIPEFD-FSN-LLQFNVSNNNLSGPVPGV 210 (626)
Q Consensus 173 ~l~l~~N~l~g~ip~~~-~~~-L~~l~ls~N~l~g~ip~~ 210 (626)
.|+..+|... .||... ++. ....++.+|.+.|.-|..
T Consensus 127 ~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 127 MLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKK 165 (177)
T ss_pred HhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCccc
Confidence 8888877765 444321 121 122233555555554443
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.4e-06 Score=86.76 Aligned_cols=131 Identities=24% Similarity=0.276 Sum_probs=67.2
Q ss_pred CeEEEEEecCCCceeccCccc-cCCCCCccEEEcccCCCcccCCccc-cCCCCCcEEEeeccccccc-------------
Q 006903 73 KSVRKIVLDGFNLSGILDTTS-VCKTQSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGN------------- 137 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~-~~~l~~L~~L~ls~N~l~g~~p~~~-~~l~~L~~L~l~~N~l~g~------------- 137 (626)
..|+.|||+.|=|..--+... ...+++|+.|+|+.|.+.-...... ..++.|+.|.|++..|+..
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~ 225 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLE 225 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHH
Confidence 467778887776654322111 2357778888888887764333222 1345555555555555421
Q ss_pred ------------cChhhhcCCCCCeEEccCCcCCccC--CCccCcCCCcEEEcCCCcccc-cCCCC-------CCCCccE
Q 006903 138 ------------LPDSLSKLNNLKRLDISNNNFSSEL--PDLSRISGLLTFFAENNQLRG-GIPEF-------DFSNLLQ 195 (626)
Q Consensus 138 ------------ip~~~~~l~~L~~L~ls~N~l~g~~--p~~~~~~~L~~l~l~~N~l~g-~ip~~-------~~~~L~~ 195 (626)
--.+..-+..|+.|||++|+|-..- +..+.++.|..|+++++.+.. .+|+. .+.+|++
T Consensus 226 ~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~ 305 (505)
T KOG3207|consen 226 VLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEY 305 (505)
T ss_pred HhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhccccccee
Confidence 1111222344555555555543221 334555555555555555442 12221 2556667
Q ss_pred EEccCCcC
Q 006903 196 FNVSNNNL 203 (626)
Q Consensus 196 l~ls~N~l 203 (626)
|+++.|++
T Consensus 306 L~i~~N~I 313 (505)
T KOG3207|consen 306 LNISENNI 313 (505)
T ss_pred eecccCcc
Confidence 77766665
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.88 E-value=1.2e-05 Score=56.81 Aligned_cols=37 Identities=32% Similarity=0.462 Sum_probs=32.2
Q ss_pred CCccEEEcccCCCcccCCccccCCCCCcEEEeeccccc
Q 006903 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS 135 (626)
Q Consensus 98 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 135 (626)
++|++|+|++|+|+ .+|+.+++|++|+.|+|++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 46899999999999 58888999999999999999998
|
... |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.86 E-value=4e-06 Score=90.30 Aligned_cols=179 Identities=13% Similarity=0.041 Sum_probs=127.5
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCC-ccccceEEEeCCeEEEEEeecCCC-Chh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPN-VLPPLAYYCSKQEKLLVYEYQPNG-SLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~n-Iv~l~g~~~~~~~~~lv~Ey~~~g-~L~ 429 (626)
.-+++|+++++||.+-...+....+.+... ....-++++|.+++||| .+..++-+..++..+++++|+..| +-.
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~ 323 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSA 323 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcccc
Confidence 457899999999987332333335544322 55667889999999999 777777777788899999999887 222
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--cccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QSFLAQ 507 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~~~~~ 507 (626)
.... .....+...+...+...-.++++|+|+ ..=+||| ||+..+ ...|..||+........ .....+
T Consensus 324 ~~~~--~se~~~~~~~~~~~~r~et~~l~~l~~----~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~~~t~~~ 392 (829)
T KOG0576|consen 324 LEMT--VSEIALEQYQFAYPLRKETRPLAELHS----SYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTMKPRTAIG 392 (829)
T ss_pred ccCC--hhhHhhhhhhhhhhhhhhccccccccc----ccccCcc----cccccc-cccccccccCCcccCcccccccCCC
Confidence 2111 111234444555666777889999994 2348999 887766 57899999987554333 445567
Q ss_pred ccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCC
Q 006903 508 TSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQ 545 (626)
Q Consensus 508 ~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~ 545 (626)
++.+++||......+..+.|+|+.|+--.++.-|-+|.
T Consensus 393 ~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 393 TPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred CCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 88899999988888889999999998777887776653
|
|
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00017 Score=70.17 Aligned_cols=137 Identities=23% Similarity=0.332 Sum_probs=88.3
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCH--------------------HH-----HHHHHHHhccCC--CCCcc
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS--------------------ED-----FKNRMQKIDHVK--HPNVL 404 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~--------------------~~-----~~~ei~~l~~l~--H~nIv 404 (626)
..|..|.-+.||+|.-.++..+|||+.+...... .+ ..+|+.-|.++. +=.+.
T Consensus 54 g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 54 GCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4688888999999998889999999986433211 00 235555555543 22222
Q ss_pred ccceEEEeCCeEEEEEeecCCC-ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC
Q 006903 405 PPLAYYCSKQEKLLVYEYQPNG-SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN 483 (626)
Q Consensus 405 ~l~g~~~~~~~~~lv~Ey~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~ 483 (626)
+.+++ ..-.|||||+... .-.-.|.. .++...+...+..++.+++.-|-. ..++||+||..=|||+.
T Consensus 134 ~Pi~~----~~nVLvMEfIg~~g~pAP~LkD----v~~e~~e~~~~~~~~v~~~~~l~~---~a~LVHgDLSEyNiL~~- 201 (268)
T COG1718 134 EPIAF----RNNVLVMEFIGDDGLPAPRLKD----VPLELEEAEGLYEDVVEYMRRLYK---EAGLVHGDLSEYNILVH- 201 (268)
T ss_pred Cceee----cCCeEEEEeccCCCCCCCCccc----CCcCchhHHHHHHHHHHHHHHHHH---hcCcccccchhhheEEE-
Confidence 33332 2347999999653 11122211 112222455666777777776663 46899999999999999
Q ss_pred CCCeEEeeccCccccCC
Q 006903 484 NMEPCISEYGLIVTENH 500 (626)
Q Consensus 484 ~~~~kl~DFGl~~~~~~ 500 (626)
++.+.|.|||-+....+
T Consensus 202 ~~~p~iID~~QaV~~~h 218 (268)
T COG1718 202 DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred CCeEEEEECccccccCC
Confidence 78999999998765443
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=97.81 E-value=6.5e-05 Score=71.57 Aligned_cols=103 Identities=14% Similarity=0.132 Sum_probs=78.4
Q ss_pred HHHHHhccCCC-CCccccceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC
Q 006903 390 NRMQKIDHVKH-PNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG 468 (626)
Q Consensus 390 ~ei~~l~~l~H-~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ 468 (626)
.|.-+++.+.+ +++.+++|+|- .++|.||.+.+++...-........-+|..|.+||.++++.+.++++.-.. .
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~-~ 82 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLG-F 82 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCC-c
Confidence 46777777776 69999999983 477999998776642210001112368999999999999999999965322 3
Q ss_pred ceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 469 IAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 469 ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
+.-.|++++|+-+++++++|+.|...+..
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcch
Confidence 77799999999999999999999976543
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.78 E-value=1.3e-05 Score=93.15 Aligned_cols=107 Identities=19% Similarity=0.211 Sum_probs=80.9
Q ss_pred CeEEEEEecCCCc-eeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNL-SGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l-~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
..+++|-+.+|.. -..++.+.+..++.|++||||+|.=-+.+|..|+++-+|++|+|++..++ .+|..+.+|+.|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 4577777777752 22333344667888888888888777888888888888888888888887 788888888888888
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCc
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQ 180 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~ 180 (626)
|+.++.....+|. ...+++|++|.+..-.
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccccccccccchhhhcccccEEEeeccc
Confidence 8888877666676 4448888888775444
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.75 E-value=3.5e-07 Score=98.93 Aligned_cols=123 Identities=21% Similarity=0.289 Sum_probs=79.4
Q ss_pred EEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChh-hhcCCCCCeEEc
Q 006903 75 VRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDS-LSKLNNLKRLDI 153 (626)
Q Consensus 75 v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~-~~~l~~L~~L~l 153 (626)
+..++.+.|.|.-. + .++..++.|+.|||++|+|+.. ..+..|+.|++|||++|.|+ .+|.. ...+. |+.|+|
T Consensus 166 L~~a~fsyN~L~~m-D-~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 166 LATASFSYNRLVLM-D-ESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred HhhhhcchhhHHhH-H-HHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 44455555555422 1 2455677788888888888742 26777788888888888887 45532 23344 778888
Q ss_pred cCCcCCccCCCccCcCCCcEEEcCCCccccc---CCCCCCCCccEEEccCCcCC
Q 006903 154 SNNNFSSELPDLSRISGLLTFFAENNQLRGG---IPEFDFSNLLQFNVSNNNLS 204 (626)
Q Consensus 154 s~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~---ip~~~~~~L~~l~ls~N~l~ 204 (626)
++|.++. +-.+.++.+|..||+++|-+++- -|-+.++.|+.|+|.+|.+.
T Consensus 240 rnN~l~t-L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTT-LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHh-hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 8887764 22366777788888888877653 23334666777777777653
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=97.75 E-value=9e-05 Score=72.86 Aligned_cols=143 Identities=22% Similarity=0.198 Sum_probs=84.3
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCC--ccccceEEEe---CCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPN--VLPPLAYYCS---KQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~n--Iv~l~g~~~~---~~~~~lv~Ey~~~g 426 (626)
+.++.|..+.||+....+ ..+++|..... .....+.+|..+++.+.... +.+++.+... ....+++||++++.
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~ 80 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR 80 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence 568999999999999887 58999997654 34467788888887775333 4455554322 23468999999998
Q ss_pred ChhH----------------hh---cCC-CCCCCCCHHH---------HHHH------------HHHHHH-HHHHHHHhc
Q 006903 427 SLFN----------------LL---HGS-ENGQSFDWGS---------RLRV------------AACVAK-ALALIHEEL 464 (626)
Q Consensus 427 ~L~~----------------~l---~~~-~~~~~l~~~~---------~~~i------------~~~ia~-gL~ylH~~~ 464 (626)
.+.. .+ +.. .....+.+.. .... ...+.+ .+..++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (239)
T PF01636_consen 81 PLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALL 160 (239)
T ss_dssp EHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhh
Confidence 7777 11 111 0111111111 0000 112222 344444432
Q ss_pred c---CCCceeccCCCCCeeeC-CCCCeEEeeccCcc
Q 006903 465 R---EDGIAHGNLKSNNILFN-NNMEPCISEYGLIV 496 (626)
Q Consensus 465 ~---~~~ivHrDlkp~NILl~-~~~~~kl~DFGl~~ 496 (626)
. ...++|+|+.|.||+++ +++.+.|.||+.+.
T Consensus 161 ~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 161 PKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred ccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 1 45699999999999999 55666799998753
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 626 | ||||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 6e-27 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 7e-27 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 4e-15 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 2e-14 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 4e-13 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-10 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-10 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 7e-10 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-09 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 2e-09 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 3e-09 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-08 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 2e-08 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 4e-08 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 4e-08 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 8e-08 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 8e-08 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 9e-08 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 1e-07 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 1e-07 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 2e-07 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 2e-07 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 2e-07 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-07 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 2e-07 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 2e-07 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 3e-07 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 3e-07 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 3e-07 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 4e-07 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 4e-07 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 5e-07 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 6e-07 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 6e-07 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 6e-07 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 7e-07 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 7e-07 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 8e-07 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 8e-07 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 8e-07 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 8e-07 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 9e-07 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 9e-07 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 9e-07 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 9e-07 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 9e-07 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 9e-07 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 1e-06 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 1e-06 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-06 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-06 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 1e-06 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 1e-06 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 1e-06 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 1e-06 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 1e-06 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 1e-06 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 1e-06 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 1e-06 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-06 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 1e-06 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 1e-06 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 1e-06 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 1e-06 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 1e-06 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 1e-06 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 2e-06 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-06 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 2e-06 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 2e-06 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-06 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 2e-06 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-06 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 3e-06 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 3e-06 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 4e-06 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 4e-06 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 6e-06 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 7e-06 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-05 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-05 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 2e-05 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 4e-05 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 8e-05 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 1e-04 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 1e-04 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 2e-04 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 2e-04 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 2e-04 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 3e-04 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 4e-04 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 4e-04 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 4e-04 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 4e-04 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 4e-04 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 6e-04 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 6e-04 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 6e-04 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 6e-04 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 6e-04 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 6e-04 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 6e-04 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 6e-04 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 6e-04 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 7e-04 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 7e-04 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 7e-04 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 7e-04 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 7e-04 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 7e-04 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 8e-04 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 8e-04 |
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 3e-56
Identities = 89/297 (29%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 343 FEDLLRA-----PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSED--FKNRMQKI 395
+L A +LGRG G +Y+ L DG ++AVKRL++ + F+ ++ I
Sbjct: 22 LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMI 81
Query: 396 DHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQS-FDWGSRLRVAACVA 454
H N+L + + E+LLVY Y NGS+ + L Q DW R R+A A
Sbjct: 82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 141
Query: 455 KALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN 514
+ LA +H+ I H ++K+ NIL + E + ++GL A+ K
Sbjct: 142 RGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGL-----------AKLMDYKDT 189
Query: 515 DISNQMCSTI---------------KADVYGFGVILLELLTGK-------LVQNNGFNLA 552
++ + TI K DV+G+GV+LLEL+TG+ L ++ L
Sbjct: 190 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 553 TWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609
WV +++E+ + D L EE + +L+QVAL C SP ERP M++V M
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKDEE-VEQLIQVALLCTQSSPMERPKMSEVVRM 305
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 2e-49
Identities = 89/337 (26%), Positives = 143/337 (42%), Gaps = 47/337 (13%)
Query: 314 SEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRA-----PAELLGRGKHGSLYRVVLD 368
S+YS + A SS ++ ++ DL A L+G G G +Y+ VL
Sbjct: 3 SKYSKATNSINDALSSSYLVPFESY-RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR 61
Query: 369 DGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427
DG +A+KR S E+F+ ++ + +HP+++ + + + E +L+Y+Y NG+
Sbjct: 62 DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN 121
Query: 428 LFNLLHGSENGQ-SFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME 486
L L+GS+ S W RL + A+ L +H I H ++KS NIL + N
Sbjct: 122 LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH----TRAIIHRDVKSINILLDENFV 177
Query: 487 PCISEYGL--IVTENHDQSFL---------------AQTSSLKINDISNQMCSTIKADVY 529
P I+++G+ TE DQ+ L L T K+DVY
Sbjct: 178 PKITDFGISKKGTEL-DQTHLSTVVKGTLGYIDPEYFIKGRL-----------TEKSDVY 225
Query: 530 GFGVILLELLTGKLVQNNG-----FNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584
FGV+L E+L + NLA W ++ D L + E + K
Sbjct: 226 SFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPES-LRK 284
Query: 585 LLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSI 621
A++C+ S +RPSM V + +E I
Sbjct: 285 FGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 2e-49
Identities = 57/296 (19%), Positives = 107/296 (36%), Gaps = 35/296 (11%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAY-- 409
E+ RG+ G +++ L +AVK S + + + +KH N+L +
Sbjct: 30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 410 --YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED 467
+ L+ + GSL + L W +A +A+ LA +HE++
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 468 G------IAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS----------L 511
I+H ++KS N+L NN+ CI+++GL + +S +
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 512 KINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF-NLATWVHSVVREEWTVEVFDE 570
I+ Q + ++ D+Y G++L EL + + + + ++E E
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQE 264
Query: 571 V---------LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617
V L M L + C + R S V I ++
Sbjct: 265 VVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 4e-46
Identities = 65/299 (21%), Positives = 124/299 (41%), Gaps = 52/299 (17%)
Query: 344 EDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS-----EDFKNRMQKIDHV 398
E + +G G G +Y+ ++ +AVK+L + + F ++ +
Sbjct: 29 ERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC 87
Query: 399 KHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALA 458
+H N++ L + + LVY Y PNGSL + L + W R ++A A +
Sbjct: 88 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 459 LIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDI-S 517
+H E+ H ++KS NIL + IS++G LA + ++ +
Sbjct: 148 FLH----ENHHIHRDIKSANILLDEAFTAKISDFG-----------LA-----RASEKFA 187
Query: 518 NQMCST-------------------IKADVYGFGVILLELLTGKLVQNNGF---NLATWV 555
+ ++ K+D+Y FGV+LLE++TG + L
Sbjct: 188 QTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247
Query: 556 HSVVREEWTVE-VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613
+ EE T+E D+ + A + + VA +C+++ N+RP + +V ++ +
Sbjct: 248 EEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 1e-37
Identities = 64/311 (20%), Positives = 117/311 (37%), Gaps = 48/311 (15%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
EL+GRG++G++Y+ LD +AVK + + + + ++ ++H N+ +
Sbjct: 19 ELIGRGRYGAVYKGSLD-ERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVG-D 76
Query: 412 SK------QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
+ E LLV EY PNGSL L + DW S R+A V + LA +H EL
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHTELP 132
Query: 466 EDG-----IAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN------ 514
I+H +L S N+L N+ IS++GL + ++
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192
Query: 515 ------------DISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWV---HSVV 559
++ + + + D+Y G+I E+ G ++ + + V
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEV 252
Query: 560 REEWTVEVFDEVLIAE----------AASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609
T E ++ E + + L + C +Q R +
Sbjct: 253 GNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312
Query: 610 INNIKEEEERS 620
+ + ER+
Sbjct: 313 MAELMMIWERN 323
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 2e-36
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 29 KRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKS--VRKIVLDGFNLS 86
K+AL+Q + L W ++D C+ W+GV CD+ ++ V + L G NL
Sbjct: 8 KQALLQIKKDLGNPTTLSS----WLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLP 63
Query: 87 GILDT-TSVCKTQSLVVLSL-EENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSK 144
+S+ L L + NN+ G + I+ QL +LY+ +SG +PD LS+
Sbjct: 64 KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ 123
Query: 145 LNNLKRLDISNNNFSSELP-DLSRISGLLTFFAENNQLRGGIPE--FDFSNLLQF-NVSN 200
+ L LD S N S LP +S + L+ + N++ G IP+ FS L +S
Sbjct: 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR 183
Query: 201 NNLSGPVP 208
N L+G +P
Sbjct: 184 NRLTGKIP 191
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 1e-34
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 97 TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156
++ +++ N + G + +N L + + RN L G+ N +++ ++ N
Sbjct: 173 SKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN 231
Query: 157 NFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP--GVNG 212
+ + +L + L NN++ G +P+ L NVS NNL G +P G
Sbjct: 232 SLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQ 291
Query: 213 RLGADSFSGNPGLCGKPLPN 232
R +++ N LCG PLP
Sbjct: 292 RFDVSAYANNKCLCGSPLPA 311
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-35
Identities = 66/347 (19%), Positives = 139/347 (40%), Gaps = 43/347 (12%)
Query: 302 SISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGS 361
S++ + G++ + S SG+ S +++ + +++ + +G+G++G
Sbjct: 1 SMTYI-PPGESLRDLIEQSQSSGSGSGLPLLVQRTIAKQIQMV-------KQIGKGRYGE 52
Query: 362 LYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAY----YCSKQEKL 417
++ G +AVK +S + + + ++H N+L +A S +
Sbjct: 53 VWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111
Query: 418 LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED----GIAHGN 473
L+ +Y NGSL++ L + D S L++A L +H E+ IAH +
Sbjct: 112 LITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRD 167
Query: 474 LKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSS-----------LKINDISNQM 520
LKS NIL N CI++ GL + ++ + + L + N
Sbjct: 168 LKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHF 227
Query: 521 CSTIKADVYGFGVILLELLTGKLVQNNG------FNLATWVHSVVREEWTVEVFDEV--- 571
S I AD+Y FG+IL E+ + ++ + + ++
Sbjct: 228 QSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPS 287
Query: 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618
+S+E + ++ ++ C +P R + +V + + E ++
Sbjct: 288 FPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 2e-34
Identities = 66/333 (19%), Positives = 127/333 (38%), Gaps = 52/333 (15%)
Query: 319 TSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRL 378
T+ SG+ LV T ++ + + E +G+G+ G ++R G +AVK
Sbjct: 24 TTSGSGSGLPLLVQRTIAR--TIVLQ-------ESIGKGRFGEVWRGKWR-GEEVAVKIF 73
Query: 379 RDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKL-----LVYEYQPNGSLFNLLH 433
S + + + ++H N+L +A +K LV +Y +GSLF+ L+
Sbjct: 74 SSREERSWFREAEIYQTVMLRHENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSLFDYLN 132
Query: 434 GSENGQSFDWGSRLRVAACVAKALALIHEELRED----GIAHGNLKSNNILFNNNMEPCI 489
+ +++A A LA +H E+ IAH +LKS NIL N CI
Sbjct: 133 R----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 188
Query: 490 SEYGLIVTENHDQSFLAQTSSLK-----------INDISNQMC--STIKADVYGFGVILL 536
++ GL V + + + + ++D N S +AD+Y G++
Sbjct: 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 248
Query: 537 ELLTGKLVQNNG------FNLATWVHSVVREEWTVEVFDEV------LIAEAASEERMLK 584
E+ + + V E V ++ + M K
Sbjct: 249 EIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAK 308
Query: 585 LLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617
+++ C + R + ++ ++ + ++E
Sbjct: 309 IMR---ECWYANGAARLTALRIKKTLSQLSQQE 338
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 5e-34
Identities = 59/286 (20%), Positives = 105/286 (36%), Gaps = 51/286 (17%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVL---- 404
L G L++ G + VK L+ S+ DF ++ HPNVL
Sbjct: 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 405 ----PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALI 460
PP + L+ + P GSL+N+LH D ++ A +A+ +A +
Sbjct: 75 ACQSPPAPHPT------LITHWMPYGSLYNVLH-EGTNFVVDQSQAVKFALDMARGMAFL 127
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLK-------- 512
H E I L S +++ + +M IS + F Q+
Sbjct: 128 HT--LEPLIPRHALNSRSVMIDEDMTARISMADV--------KFSFQSPGRMYAPAWVAP 177
Query: 513 --INDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570
+ AD++ F V+L EL+T + V + V E
Sbjct: 178 EALQKKPEDTNRR-SADMWSFAVLLWELVTRE-VPFADLSNMEIGMKVALEGLRPT---- 231
Query: 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616
I S + KL++ C+N+ P +RP + + ++ ++++
Sbjct: 232 --IPPGISPH-VSKLMK---ICMNEDPAKRPKFDMIVPILEKMQDK 271
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 1e-33
Identities = 62/293 (21%), Positives = 118/293 (40%), Gaps = 37/293 (12%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
E +G+G++G ++R G +AVK S + + ++H N+L +A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIAS-D 71
Query: 412 SKQEKL-----LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRE 466
L+ Y GSL++ L + D S LR+ +A LA +H E+
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 467 D----GIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSS---------- 510
IAH +LKS NIL N + CI++ GL + +++ +Q +
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 511 -LKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD 569
L + S + D++ FG++L E+ + + + VV + + E
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMR 247
Query: 570 EVLIAE---------AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613
+V+ + S+ + L ++ C Q+P+ R + ++ + I
Sbjct: 248 KVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-33
Identities = 54/271 (19%), Positives = 110/271 (40%), Gaps = 26/271 (9%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
E++GRG G + + +A+K++ S + F ++++ V HPN++
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER-KAFIVELRQLSRVNHPNIVKLYG--A 69
Query: 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAH 471
LV EY GSL+N+LHG+E + + ++ +A +H ++ + H
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH-SMQPKALIH 128
Query: 472 GNLKSNNILFNNNMEPC-ISEYGLIVTENHDQSFLAQTSSLK-----INDISNQMCSTIK 525
+LK N+L I ++G + S + S K
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGT--ACDIQTHMTNNKGSAAWMAPEV--FEGSNYSE-K 183
Query: 526 ADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585
DV+ +G+IL E++T + + A + V + + + + L
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL-------PKPIESL 236
Query: 586 LQVALRCINQSPNERPSMNQVAVMINNIKEE 616
+ RC ++ P++RPSM ++ ++ ++
Sbjct: 237 MT---RCWSKDPSQRPSMEEIVKIMTHLMRY 264
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 5e-33
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 6/174 (3%)
Query: 83 FNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSL 142
GI + + + ++ G S N + L + N LSG +P +
Sbjct: 594 LEFQGIRSE-QLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 652
Query: 143 SKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVS 199
+ L L++ +N+ S +PD + + GL +N+L G IP+ + L + ++S
Sbjct: 653 GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLS 712
Query: 200 NNNLSGPVP--GVNGRLGADSFSGNPGLCGKPLPNACPPTPPPIKESKGSSTNQ 251
NNNLSGP+P G F NPGLCG PLP P + S +
Sbjct: 713 NNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNADGYAHHQRSHHHH 766
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 2e-27
Identities = 51/210 (24%), Positives = 77/210 (36%), Gaps = 40/210 (19%)
Query: 31 ALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILD 90
L+ F + L N D W+ + +PC+ + GVTC V I L L+
Sbjct: 16 QLISFKDVLPDKNLLPD----WSSNKNPCT--FDGVTCRDD--KVTSIDLSSKPLNVGFS 67
Query: 91 T--TSVCKTQSLVVLSLEENNIAGTVS-------------------------QEISNCKQ 123
+S+ L L L ++I G+VS + +C
Sbjct: 68 AVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSG 127
Query: 124 LTHLYVGRNKLSGNLPDS-LSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAE----N 178
L L V N L S KLN+L+ LD+S N+ S +S
Sbjct: 128 LKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISG 187
Query: 179 NQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208
N++ G + NL +VS+NN S +P
Sbjct: 188 NKISGDVDVSRCVNLEFLDVSSNNFSTGIP 217
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-25
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 68 CDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHL 127
C + + +++++ L +G + ++ LV L L N ++GT+ + + +L L
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 128 YVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIP 186
+ N L G +P L + L+ L + N+ + E+P LS + L NN+L G IP
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Query: 187 EF--DFSNLLQFNVSNNNLSGPVPGVNGRL 214
++ NL +SNN+ SG +P G
Sbjct: 508 KWIGRLENLAILKLSNNSFSGNIPAELGDC 537
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 5e-24
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
++ + + G +SG + V + +L L + NN + + + +C L HL + N
Sbjct: 178 GELKHLAISGNKISGDV---DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGN 233
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF---D 189
KLSG+ ++S LK L+IS+N F +P + L N+ G IP+F
Sbjct: 234 KLSGDFSRAISTCTELKLLNISSNQFVGPIPP-LPLKSLQYLSLAENKFTGEIPDFLSGA 292
Query: 190 FSNLLQFNVSNNNLSGPVP 208
L ++S N+ G VP
Sbjct: 293 CDTLTGLDLSGNHFYGAVP 311
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-23
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Query: 69 DSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLY 128
KS++ + L +G + +L L L N+ G V +C L L
Sbjct: 265 PLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLA 324
Query: 129 VGRNKLSGNLP-DSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFA-ENNQLRGGI 185
+ N SG LP D+L K+ LK LD+S N FS ELP+ L+ +S L +N G I
Sbjct: 325 LSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384
Query: 186 P----EFDFSNLLQFNVSNNNLSGPVP 208
+ + L + + NN +G +P
Sbjct: 385 LPNLCQNPKNTLQELYLQNNGFTGKIP 411
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 3e-23
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
Query: 80 LDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEI---SNCKQLTHLYVGRNKLSG 136
+ L + K SL VL L N+I+G C +L HL + NK+SG
Sbjct: 133 VSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISG 192
Query: 137 NLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPE--FDFSNLL 194
++ +S+ NL+ LD+S+NNFS+ +P L S L N+L G + L
Sbjct: 193 DVD--VSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELK 250
Query: 195 QFNVSNNNLSGPVPGVN 211
N+S+N GP+P +
Sbjct: 251 LLNISSNQFVGPIPPLP 267
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 98.4 bits (246), Expect = 2e-21
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLS 143
L G + + ++L L L+ N++ G + +SNC L + + N+L+G +P +
Sbjct: 453 MLEGEI-PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511
Query: 144 KLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNN 202
+L NL L +SNN+FS +P L L+ N G IP ++ N
Sbjct: 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA-AMFK-QSGKIAANF 569
Query: 203 LSGPVPGVNGRLG 215
++G G
Sbjct: 570 IAGKRYVYIKNDG 582
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 1e-32
Identities = 69/281 (24%), Positives = 120/281 (42%), Gaps = 40/281 (14%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLA 408
E +G G G+++R G +AVK L + + +F + + ++HPN++ +
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 409 YYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED 467
++ L +V EY GSL+ LLH S + D RL +A VAK + +H R
Sbjct: 102 A-VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN--RNP 158
Query: 468 GIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS-FLAQTSSLKIND----------- 515
I H NLKS N+L + + ++GL S A T +
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGL--------SRLKASTFLSSKSAAGTPEWMAPEV 210
Query: 516 ISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575
+ ++ + K+DVY FGVIL EL T + N A V +V + +E+ +
Sbjct: 211 LRDEPSNE-KSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFKCKRLEIPRNLN--- 265
Query: 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616
++ +++ C P +RPS + ++ + +
Sbjct: 266 ----PQVAAIIE---GCWTNEPWKRPSFATIMDLLRPLIKS 299
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 2e-29
Identities = 66/283 (23%), Positives = 124/283 (43%), Gaps = 41/283 (14%)
Query: 352 ELLGRGKHGSLYR------VVLDDGLMLAVKRLRDWSISSE---DFKNRMQKIDHVKHPN 402
+ +G G G++Y+ V AVK L + + + FKN + + +H N
Sbjct: 30 QRIGSGSFGTVYKGKWHGDV--------AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81
Query: 403 VLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHE 462
+L + Y + + +V ++ SL++ LH SE F+ + +A A+ + +H
Sbjct: 82 ILLFMGY-STAPQLAIVTQWCEGSSLYHHLHASET--KFEMKKLIDIARQTARGMDYLHA 138
Query: 463 ELREDGIAHGNLKSNNILFNNNMEPCISEYGL---IVTENHDQSFLAQTSSLK------I 513
+ I H +LKSNNI + + I ++GL + F + S+ I
Sbjct: 139 K----SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 514 NDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLI 573
+ + ++DVY FG++L EL+TG+L +N N + V R + ++
Sbjct: 195 RMQDSNPY-SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG----SLSPDLSK 249
Query: 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616
+ +RM +L+ C+ + +ERPS ++ I + E
Sbjct: 250 VRSNCPKRMKRLMA---ECLKKKRDERPSFPRILAEIEELARE 289
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 7e-29
Identities = 52/285 (18%), Positives = 106/285 (37%), Gaps = 37/285 (12%)
Query: 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS-EDFKNRMQKIDHVKHPNVLPPLAY 409
E+LG+G G +V + G ++ +K L + + F ++ + ++HPNVL +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 410 YCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG 468
K ++L + EY G+L ++ + W R+ A +A +A +H
Sbjct: 76 -LYKDKRLNFITEYIKGGTLRGIIK--SMDSQYPWSQRVSFAKDIASGMAYLHSM----N 128
Query: 469 IAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISNQMC----- 521
I H +L S+N L N ++++GL ++ + Q ++ +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 522 ----------STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571
K DV+ FG++L E++ + V F +
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY----LPRTMDFGLN--VRGFLDR 242
Query: 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616
+ +RC + P +RPS ++ + ++
Sbjct: 243 YCPPNCPPS----FFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 1e-28
Identities = 52/302 (17%), Positives = 117/302 (38%), Gaps = 43/302 (14%)
Query: 333 LTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS------ 385
S++ L ++ + +G+G G +++ + D ++A+K L
Sbjct: 8 FPKSRLPTLADNEIEYE--KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 386 --EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDW 443
++F+ + + ++ HPN++ +V E+ P G L++ L W
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIKW 121
Query: 444 GSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPC-----ISEYGLIVTE 498
+LR+ +A + + + I H +L+S NI + E ++++GL
Sbjct: 122 SVKLRLMLDIALGIEYMQN--QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS 179
Query: 499 NHDQSFLAQTSS------LKINDISNQMCSTIKADVYGFGVILLELLTGKLV-QNNGFNL 551
H S L + + + T KAD Y F +IL +LTG+ +
Sbjct: 180 VHSVSGLLGNFQWMAPETIG----AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
Query: 552 ATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611
+++ + E + ++ R+ +++ C + P +RP + + ++
Sbjct: 236 IKFINMIREEGLRPTIPEDC-------PPRLRNVIE---LCWSGDPKKRPHFSYIVKELS 285
Query: 612 NI 613
+
Sbjct: 286 EL 287
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 2e-27
Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLR-----DWSISSEDFKNRMQKIDHVKHPNVLPP 406
E++G G G +YR G +AVK R D S + E+ + + +KHPN++
Sbjct: 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 407 LAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
C K+ L LV E+ G L +L G+ + A +A+ + +H+E
Sbjct: 72 RGV-CLKEPNLCLVMEFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHDE-A 125
Query: 466 EDGIAHGNLKSNNILFNNNMEPC--------ISEYGLIVTENHDQSFLAQTSSLK----- 512
I H +LKS+NIL +E I+++GL E H + ++ +
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL-AREWHRTTKMSAAGAYAWMAPE 184
Query: 513 INDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572
+ I M S +DV+ +GV+L ELLTG++ G + + V + + +
Sbjct: 185 V--IRASMFS-KGSDVWSYGVLLWELLTGEVPF-RGIDGLAVAYGVAMNKLALPIPSTC- 239
Query: 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613
E KL++ C N P+ RPS + + I
Sbjct: 240 ------PEPFAKLME---DCWNPDPHSRPSFTNILDQLTTI 271
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 4e-27
Identities = 47/301 (15%), Positives = 110/301 (36%), Gaps = 61/301 (20%)
Query: 352 ELLGRGKHGSLYR------VVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPN 402
EL+G+G+ G +Y V A++ + + + FK + +H N
Sbjct: 39 ELIGKGRFGQVYHGRWHGEV--------AIRLIDIERDNEDQLKAFKREVMAYRQTRHEN 90
Query: 403 VLPPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIH 461
V+ + C L ++ +L++++ ++ D ++A + K + +H
Sbjct: 91 VVLFMGA-CMSPPHLAIITSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLH 147
Query: 462 EELREDGIAHGNLKSNNILFNNNMEPC-ISEYGLIVTENHDQSFLAQT------------ 508
+ GI H +LKS N+ ++N I+++GL Q+ +
Sbjct: 148 AK----GILHKDLKSKNVFYDNGK--VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHL 201
Query: 509 -----SSLKINDISNQMCSTIKADVYGFGVILLELLTGKL--VQNNGFNLATWVHSVVRE 561
L + +++ + +DV+ G I EL + + + + ++
Sbjct: 202 APEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP 261
Query: 562 EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSI 621
+++ + + +L C ERP+ ++ M+ + + R +
Sbjct: 262 N----------LSQIGMGKEISDILL---FCWAFEQEERPTFTKLMDMLEKLP-KRNRRL 307
Query: 622 S 622
S
Sbjct: 308 S 308
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 3e-18
Identities = 33/201 (16%), Positives = 66/201 (32%), Gaps = 24/201 (11%)
Query: 43 NAARDPNWG-----------WNRSSDPCS-GKWVGVTCDSRQKSVRKIVLDGFNLSGILD 90
+A NW WN + + G GV+ +S + V + L+GF SG +
Sbjct: 40 DALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGR-VTGLSLEGFGASGRV- 97
Query: 91 TTSVCKTQSLVVLSLEENNIAG----TVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLN 146
++ + L VL+L + + IS R D + +
Sbjct: 98 PDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPRED 157
Query: 147 --NLKRLDISNNNFSSELPDLSRIS-GLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNN 201
+L + I+++ + SRI+ +N + + + + L QF + N+
Sbjct: 158 FSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNI-TFVSKAVMRLTKLRQFYMGNS 216
Query: 202 NLSGPVPGVNGRLGADSFSGN 222
++
Sbjct: 217 PFVAENICEAWENENSEYAQQ 237
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 1e-16
Identities = 19/140 (13%), Positives = 43/140 (30%), Gaps = 18/140 (12%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAG-------TVSQEISNCKQLTHLYVGRNKLSG 136
L I + + + N I + ++ + + N++S
Sbjct: 388 KLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISK 447
Query: 137 NLPDSLSKLNNLKRLDISNNNFSS--------ELPDLSRISGLLTFFAENNQLRGGIPEF 188
+ S + L +++ N + E + L + N+L +F
Sbjct: 448 FPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDF 507
Query: 189 DFSNL--LQF-NVSNNNLSG 205
+ L L ++S N+ S
Sbjct: 508 RATTLPYLVGIDLSYNSFSK 527
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 6e-16
Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 12/124 (9%)
Query: 97 TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156
++ + E T + N K LT + V LP L L ++ ++++ N
Sbjct: 224 CEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283
Query: 157 NFSS---------ELPDLSRISGLLTFFAENNQLRGGIPEFDFSNL--LQ-FNVSNNNLS 204
S L D + + N L+ E + L N L
Sbjct: 284 RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLE 343
Query: 205 GPVP 208
G +P
Sbjct: 344 GKLP 347
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-15
Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 12/153 (7%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
+ ++ I + NL TS+ K + L +L N + G + + +L L + N
Sbjct: 305 EKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYN 363
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSS--ELPDLSRISGLLTFFAENNQLRG------- 183
+++ + ++ L ++N + D +S + N++
Sbjct: 364 QITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD 423
Query: 184 GIPE--FDFSNLLQFNVSNNNLSGPVPGVNGRL 214
+ F N+ N+SNN +S +
Sbjct: 424 PLDPTPFKGINVSSINLSNNQISKFPKELFSTG 456
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 2e-14
Identities = 17/140 (12%), Positives = 41/140 (29%), Gaps = 11/140 (7%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVG-- 130
+ I L L+ + D LV + L N+ + N L +
Sbjct: 488 YLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSF-SKFPTQPLNSSTLKGFGIRNQ 546
Query: 131 ----RNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIP 186
N+ P+ ++ +L +L I +N+ + + + ++N
Sbjct: 547 RDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNE-KITPNISVLDIKDNPNISIDL 604
Query: 187 E--FDFSNLLQFNVSNNNLS 204
+ + + +
Sbjct: 605 SYVCPYIEAGMYMLFYDKTQ 624
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 1e-13
Identities = 32/171 (18%), Positives = 54/171 (31%), Gaps = 20/171 (11%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAG-------TVSQEISNCKQLTHLYVGRNKLSG 136
+S L ++L N + ++ N LT + + NKL+
Sbjct: 444 QISKFPKE-LFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK 502
Query: 137 NLPDSL--SKLNNLKRLDISNNNFSS------ELPDLSRISGLLTFFAENNQLRGGIPEF 188
L D + L L +D+S N+FS L A+ N+ PE
Sbjct: 503 -LSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEG 561
Query: 189 --DFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNACPPT 237
+L Q + +N++ + + NP L CP
Sbjct: 562 ITLCPSLTQLQIGSNDIRKVNEKITPNISVLDIKDNP-NISIDLSYVCPYI 611
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 6e-13
Identities = 24/156 (15%), Positives = 43/156 (27%), Gaps = 32/156 (20%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSG------- 136
+ S T + NNI VS+ + +L Y+G +
Sbjct: 169 DPQQKSIKKSSRITLKDTQIGQLSNNI-TFVSKAVMRLTKLRQFYMGNSPFVAENICEAW 227
Query: 137 ------------NLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRG 183
L +L +++ N ++LP L + + N+
Sbjct: 228 ENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGIS 287
Query: 184 GIPEFD----------FSNLLQFNVSNNNL-SGPVP 208
G D + + NNL + PV
Sbjct: 288 GEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVE 323
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 1e-17
Identities = 25/151 (16%), Positives = 50/151 (33%), Gaps = 8/151 (5%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNL-PDSL 142
NL + + + ++L+ L + + + + L L + N N PD
Sbjct: 407 NLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF 466
Query: 143 SKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVS 199
++L NL LD+S P + +S L +N ++L + S
Sbjct: 467 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYS 526
Query: 200 NNNLSGPVPGVNGRLGAD----SFSGNPGLC 226
N++ + + + N C
Sbjct: 527 LNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 557
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 5e-15
Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 5/140 (3%)
Query: 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK 133
S + + L L + S L VL L I + L+ L + N
Sbjct: 29 STKNLDLSFNPLRHLGSY-SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 134 LSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSN 192
+ + S L++L++L N +S + + L +N ++ FSN
Sbjct: 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 193 L--LQF-NVSNNNLSGPVPG 209
L L+ ++S+N +
Sbjct: 148 LTNLEHLDLSSNKIQSIYCT 167
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 3e-14
Identities = 22/143 (15%), Positives = 40/143 (27%), Gaps = 6/143 (4%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
S+ + + G + + ++L L L + + ++ L L + N
Sbjct: 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 504
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSSELPDL--SRISGLLTFFAENNQLRGGIPEFDF 190
LN+L+ LD S N+ + S L N F
Sbjct: 505 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSF 564
Query: 191 SNLL----QFNVSNNNLSGPVPG 209
+ Q V + P
Sbjct: 565 LQWIKDQRQLLVEVERMECATPS 587
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 6e-14
Identities = 20/132 (15%), Positives = 46/132 (34%), Gaps = 7/132 (5%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSL 142
+ + +++ + L L + +N+ + + + L +L +
Sbjct: 384 GVITM--SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 441
Query: 143 SKLNNLKRLDISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNV 198
+ L++L+ L ++ N+F + + L QL P S+L N+
Sbjct: 442 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 501
Query: 199 SNNNLSGPVPGV 210
S+NN
Sbjct: 502 SHNNFFSLDTFP 513
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 1e-11
Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 5/124 (4%)
Query: 92 TSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS--GNLPDSLSKLNNLK 149
+ + L + G + + L L + RN LS G S +LK
Sbjct: 317 GQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 150 RLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDF---SNLLQFNVSNNNLSGP 206
LD+S N + + + L +++ L+ F NL+ ++S+ +
Sbjct: 377 YLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 436
Query: 207 VPGV 210
G+
Sbjct: 437 FNGI 440
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 6/137 (4%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGT-VSQEISNCKQLTHLYVGR 131
S++K+V NL+ + + + ++L L++ N I + + SN L HL +
Sbjct: 100 SSLQKLVAVETNLASLENF-PIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 158
Query: 132 NKLSGNLPDSLSKLNNLK----RLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPE 187
NK+ L L+ + LD+S N + P + L NN + +
Sbjct: 159 NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMK 218
Query: 188 FDFSNLLQFNVSNNNLS 204
L V L
Sbjct: 219 TCIQGLAGLEVHRLVLG 235
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 24/150 (16%), Positives = 49/150 (32%), Gaps = 11/150 (7%)
Query: 71 RQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQE---ISNCKQLTHL 127
++ + K+ L S + T + L V L + E S + L +L
Sbjct: 198 KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257
Query: 128 YVGRNKLS------GNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQL 181
+ +L+ ++ D + L N+ + + + D S G N +
Sbjct: 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKF 316
Query: 182 RGGIPEFDFSNLLQFNVSNNNLSGPVPGVN 211
G P +L + ++N V+
Sbjct: 317 -GQFPTLKLKSLKRLTFTSNKGGNAFSEVD 345
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 6e-05
Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 9/97 (9%)
Query: 118 ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP-DLSRISGLLTFFA 176
+ +T+ + N +PD+L + K LD+S N L
Sbjct: 4 VEVVPNITYQCMELNFYK--IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDL 59
Query: 177 ENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGV 210
+++ + +L L ++ N + G
Sbjct: 60 SRCEIQTIEDG-AYQSLSHLSTLILTGNPIQSLALGA 95
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 79.2 bits (195), Expect = 5e-16
Identities = 33/250 (13%), Positives = 77/250 (30%), Gaps = 37/250 (14%)
Query: 352 ELLGRGKHGSLYRVVLDDGLML------AVKRLRDWSIS-SEDFKNRMQKIDHVKHPNVL 404
LLG G +Y D +K + + M+++ +
Sbjct: 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFM 130
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLL--HGSENGQSFDWGSRLRVAACVAKALALIHE 462
+ + + +LV E G+L N + + + + G + A + + +H+
Sbjct: 131 KFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD 190
Query: 463 ELREDGIAHGNLKSNNILFNNNMEP-----------CISEYGL-IVTENHDQSFLAQTSS 510
I HG++K +N + N + + G I + + +
Sbjct: 191 C----EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK- 245
Query: 511 LKINDISNQMC--------STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE 562
+ S C + D +G + +L G ++ + R
Sbjct: 246 ---CETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRL 302
Query: 563 WTVEVFDEVL 572
+++++E
Sbjct: 303 PHLDMWNEFF 312
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 7e-16
Identities = 51/268 (19%), Positives = 105/268 (39%), Gaps = 40/268 (14%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
+GRG ++Y+ + + + +A L+D ++ + + ++ + ++HPN++
Sbjct: 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 91
Query: 408 AYY---CSKQEKLLVY-EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
+ ++ +++ E +G+L L + + + K L +H
Sbjct: 92 DSWESTVKGKKCIVLVTELMTSGTLKTYL---KRFKVMKIKVLRSWCRQILKGLQFLHT- 147
Query: 464 LREDGIAHGNLKSNNILFNNNMEPC-ISEYGL--IVTENHDQS------FLAQTSSLKIN 514
R I H +LK +NI I + GL + + ++ F+A
Sbjct: 148 -RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAP------- 199
Query: 515 DISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574
++ + DVY FG+ +LE+ T + + N A V FD+V I
Sbjct: 200 EMYEEKYDE-SVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV-KPASFDKVAIP 257
Query: 575 EAASEERMLKLLQVALRCINQSPNERPS 602
E +++ CI Q+ +ER S
Sbjct: 258 EVKE------IIE---GCIRQNKDERYS 276
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 3e-15
Identities = 50/288 (17%), Positives = 99/288 (34%), Gaps = 60/288 (20%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHV----KHPNVLPP 406
E +G G+ GS+++ V DG + A+KR + S D +N ++++ +H +V+
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV-- 74
Query: 407 LAYYCSKQEKLLVY---EYQPNGSLFNLL-HGSENGQSFDWGSRLRVAACVAKALALIHE 462
Y+ + E + EY GSL + + F + V + L IH
Sbjct: 75 -RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133
Query: 463 ELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIND------- 515
+ H ++K +NI + P + E + + + KI D
Sbjct: 134 M----SLVHMDIKPSNIFISRTSIPNAASE-----EGDEDDWASNKVMFKIGDLGHVTRI 184
Query: 516 -----------------ISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV 558
+ KAD++ + ++ + + H +
Sbjct: 185 SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL----PRNGDQWHEI 240
Query: 559 VREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
+ + +VL S+E ++ I+ P RPS +
Sbjct: 241 RQGR--LPRIPQVL-----SQE----FTELLKVMIHPDPERRPSAMAL 277
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 4e-15
Identities = 52/304 (17%), Positives = 107/304 (35%), Gaps = 76/304 (25%)
Query: 337 KVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNR----M 392
V K+ F P ++LG G G++ + D +AVKR+ F +R +
Sbjct: 20 IVGKISFC-----PKDVLGHGAEGTIVYRGMFDNRDVAVKRI---LPECFSFADREVQLL 71
Query: 393 QKIDHVKHPNVLPPLAYYCSKQEKLLVY---EYQPNGSLFNLLHGSENGQSFDWGSRLRV 449
++ D +HPNV + Y+C+++++ Y E +L + + + + +
Sbjct: 72 RESD--EHPNV---IRYFCTEKDRQFQYIAIELCA-ATLQEYVE--QKDFAHLGLEPITL 123
Query: 450 AACVAKALALIHEELREDGIAHGNLKSNNILF-----NNNMEPCISEYGLIVTENHDQSF 504
LA +H I H +LK +NIL + ++ IS++GL +
Sbjct: 124 LQQTTSGLAHLHSL----NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179
Query: 505 LAQTSSLK----------INDISNQMCSTIKADVYGFGVILLELLTG------------K 542
++ S + +++ + + D++ G + +++
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTY-TVDIFSAGCVFYYVISEGSHPFGKSLQRQA 238
Query: 543 LVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPS 602
+ +L + V + LI + I P +RPS
Sbjct: 239 NILLGACSLD---CLHPEKHEDVIARE--LIE----------------KMIAMDPQKRPS 277
Query: 603 MNQV 606
V
Sbjct: 278 AKHV 281
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 5e-15
Identities = 48/277 (17%), Positives = 87/277 (31%), Gaps = 59/277 (21%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDH----VKHPNVLPP 406
LG G +G +++V +DG + AVKR +D ++ ++ +HP
Sbjct: 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCC--- 119
Query: 407 LAYYCSKQEKLLVY---EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
+ + +E ++Y E SL G S ALA +H +
Sbjct: 120 VRLEQAWEEGGILYLQTEL-CGPSLQQHC--EAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCST 523
G+ H ++K NI + ++GL+ L
Sbjct: 177 ----GLVHLDVKPANIFLGPRGRCKLGDFGLL-------------VELGTAGAGEVQEGD 219
Query: 524 I--------------KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD 569
ADV+ G+ +LE+ + + G + E+T +
Sbjct: 220 PRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGL-- 277
Query: 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
S E L V + + P R + +
Sbjct: 278 --------SSE----LRSVLVMMLEPDPKLRATAEAL 302
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 7e-15
Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 35/280 (12%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
LG+G G ++ + +A+K L+ ++S E F Q + ++H ++ A
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAH 471
S++ +V EY GSL + L E G+ + +AA +A +A + H
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERM----NYVH 303
Query: 472 GNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN----DISNQMCSTIKAD 527
+L++ NIL N+ ++++GL ++ Q + I + + TIK+D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 528 VYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK--- 584
V+ FG++L EL T V G EV D+V RM
Sbjct: 364 VWSFGILLTELTTKGRVPYPGMVNR-------------EVLDQV-----ERGYRMPCPPE 405
Query: 585 ----LLQVALRCINQSPNERPSMNQVAVMINNIKEEEERS 620
L + +C + P ERP+ + + + E
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 75.4 bits (185), Expect = 9e-15
Identities = 33/302 (10%), Positives = 79/302 (26%), Gaps = 70/302 (23%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQK---------------- 394
+LG+ + + G V + +M++
Sbjct: 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQ 138
Query: 395 -------------IDHVKHPNVLPPLAYYCSKQEKLLVYEY-QPNGSLFN----LLHGSE 436
+ + ++ + Y + +L LL S
Sbjct: 139 AKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSS 198
Query: 437 NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496
+S +RL++ V + LA +H G+ H L+ +I+ + ++ + +V
Sbjct: 199 THKSLVHHARLQLTLQVIRLLASLHHY----GLVHTYLRPVDIVLDQRGGVFLTGFEHLV 254
Query: 497 TENHDQSF----------LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKL--V 544
+ L + + T D + G+++ + L
Sbjct: 255 RDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPIT 314
Query: 545 QNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMN 604
++ + W+ + V L+ L+ +R
Sbjct: 315 KDAALGGSEWIFRSCK-NIPQPVRA--LLE---------GFLRY-------PKEDRLLPL 355
Query: 605 QV 606
Q
Sbjct: 356 QA 357
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 1e-14
Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 35/280 (12%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
LG+G G ++ + +A+K L+ ++S E F Q + ++H ++ A
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 331
Query: 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAH 471
S++ +V EY GSL + L E G+ + +AA +A +A + H
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERM----NYVH 386
Query: 472 GNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN----DISNQMCSTIKAD 527
+L++ NIL N+ ++++GL ++ Q + I + + TIK+D
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 528 VYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK--- 584
V+ FG++L EL T V G EV D+V RM
Sbjct: 447 VWSFGILLTELTTKGRVPYPGMVNR-------------EVLDQV-----ERGYRMPCPPE 488
Query: 585 ----LLQVALRCINQSPNERPSMNQVAVMINNIKEEEERS 620
L + +C + P ERP+ + + + E
Sbjct: 489 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 528
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 1e-14
Identities = 56/288 (19%), Positives = 115/288 (39%), Gaps = 41/288 (14%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNR-MQKID---HVKHPNVLPP 406
+ +GRG+ +YR L DG+ +A+K+++ + + + +++ID + HPNV
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV--- 94
Query: 407 LAYYCS--KQEKLLVY-EYQPNGSLFNLL-HGSENGQSFDWGSRLRVAACVAKALALIHE 462
+ YY S + +L + E G L ++ H + + + + + AL +H
Sbjct: 95 IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154
Query: 463 ELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTS-------SLKIND 515
+ H ++K N+ + + GL + + A + S +
Sbjct: 155 R----RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPER-- 207
Query: 516 ISNQMCSTIKADVYGFGVILLELLTGKLV-QNNGFNLATWVHSVVREEWTVEVFDEVLIA 574
I + K+D++ G +L E+ + + NL + + + ++ L +
Sbjct: 208 IHENGYNF-KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY------PPLPS 260
Query: 575 EAASEERMLKLLQVALRCINQSPNERPSMNQV---AVMINNIKEEEER 619
+ SEE L Q+ CIN P +RP + V A ++
Sbjct: 261 DHYSEE----LRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE 304
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 76.1 bits (187), Expect = 2e-14
Identities = 23/128 (17%), Positives = 36/128 (28%), Gaps = 13/128 (10%)
Query: 92 TSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151
T + + SN K LT + + LPD L L L+ L
Sbjct: 461 TYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSL 520
Query: 152 DISNNNFSS---------ELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQ-FNV 198
+I+ N S L D + F+ N L + L +
Sbjct: 521 NIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDC 580
Query: 199 SNNNLSGP 206
+N +
Sbjct: 581 VHNKVRHL 588
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 3e-14
Identities = 20/153 (13%), Positives = 52/153 (33%), Gaps = 15/153 (9%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
++ + NL + S+ K L +L N + + +LT L + N
Sbjct: 548 PKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKV--RHLEAFGTNVKLTDLKLDYN 605
Query: 133 KLSGNLPDSL-SKLNNLKRLDISNNNFSSELPD---LSRISGLLTFFAENNQLRG----- 183
++ +P+ + + ++ L S+N +P+ + + + N++
Sbjct: 606 QIE-EIPEDFCAFTDQVEGLGFSHNKLKY-IPNIFNAKSVYVMGSVDFSYNKIGSEGRNI 663
Query: 184 --GIPEFDFSNLLQFNVSNNNLSGPVPGVNGRL 214
+ ++ N +S N + +
Sbjct: 664 SCSMDDYKGINASTVTLSYNEIQKFPTELFATG 696
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 2e-13
Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 16/138 (11%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAG-----TVSQEISNCKQLTHLYVGRNKLSGNL 138
L I + + + + N I + S + + + + N++
Sbjct: 630 KLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFP 689
Query: 139 PDSLSKLNNLKRLDISNNNFSS--------ELPDLSRISGLLTFFAENNQLRGGIPEFDF 190
+ + + + + +SNN +S + + L T N+L +F
Sbjct: 690 TELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRA 749
Query: 191 SNL--LQF-NVSNNNLSG 205
+ L L +VS N S
Sbjct: 750 TTLPYLSNMDVSYNCFSS 767
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 2e-12
Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 36/155 (23%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGR------NKLSGN 137
L+ + D L + + N + + + N QL + N++
Sbjct: 739 KLTSLSDDFRATTLPYLSNMDVSYNCFS-SFPTQPLNSSQLKAFGIRHQRDAEGNRILRQ 797
Query: 138 LPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFN 197
P ++ +L +L I +N+ + E L +
Sbjct: 798 WPTGITTCPSLIQLQIGSNDIRK------------------------VDEKLTPQLYILD 833
Query: 198 VSNNNL-SGPVPGVNGRLGAD----SFSGNPGLCG 227
+++N S V V + A + + G
Sbjct: 834 IADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRG 868
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 1e-11
Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 33/148 (22%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSG-------------------NLP 139
+ N I +S+ I +L +Y + + N
Sbjct: 426 KDTQIGNLTNRI-TFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEE 484
Query: 140 DSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFD--------- 189
S S L +L +++ N ++LPD L + L + N+
Sbjct: 485 LSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDE 544
Query: 190 --FSNLLQFNVSNNNLSG-PVPGVNGRL 214
+ F + NNL P ++
Sbjct: 545 DTGPKIQIFYMGYNNLEEFPASASLQKM 572
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 63.0 bits (153), Expect = 2e-10
Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 13/173 (7%)
Query: 52 WNRSSDPCS-GKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNI 110
WN + + G GV D+ + V + L GF G + ++ + L VLS ++
Sbjct: 302 WNFNKELDMWGDQPGVDLDNNGR-VTGLSLAGFGAKGRVPD-AIGQLTELKVLSFGTHSE 359
Query: 111 AGTVSQEISNC-------KQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP 163
+ ++ + + K+ + L+ + L+ N
Sbjct: 360 TVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419
Query: 164 DLSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNNLSGPVPGVNGRL 214
D N++ I + + L +N+ + V+
Sbjct: 420 DSRISLKDTQIGNLTNRI-TFISKAIQRLTKLQIIYFANSPFTYDNIAVDWED 471
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 2e-14
Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 9/151 (5%)
Query: 73 KSVRKIVLDGFNLSGILDTT-SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGR 131
+++++++L + + + SL L L N I +L L++
Sbjct: 145 ENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNN 204
Query: 132 NKLSGNLPDSLS---KLNNLKRLDISNNNFSSELPDL---SRISGLLTFFAENNQLRGGI 185
+L +L + L +++ L +SN+ S+ + + L N L
Sbjct: 205 VQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264
Query: 186 PEF--DFSNLLQFNVSNNNLSGPVPGVNGRL 214
+ L F + NN+ L
Sbjct: 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGL 295
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 3e-14
Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 6/130 (4%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLS 143
LS + D + +L L L N+I + K L L + N LS +
Sbjct: 84 ELSQLSDK-TFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQV 142
Query: 144 KLNNLKRLDISNNNFSS---ELPDLSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNV 198
+L NL+ L +SNN + E D+ S L +NQ++ P L +
Sbjct: 143 QLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL 202
Query: 199 SNNNLSGPVP 208
+N L +
Sbjct: 203 NNVQLGPSLT 212
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 6e-14
Identities = 24/146 (16%), Positives = 47/146 (32%), Gaps = 4/146 (2%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
++ + L L + + + L L + N I+ + L L + N
Sbjct: 25 TNITVLNLTHNQLRRLPAA-NFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPE--FD 189
+LS + + NL L + +N+ + + L+T +N L
Sbjct: 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ 143
Query: 190 FSNLLQFNVSNNNLSGPVPGVNGRLG 215
NL + +SNN +
Sbjct: 144 LENLQELLLSNNKIQALKSEELDIFA 169
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 9e-14
Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 13/146 (8%)
Query: 73 KSVRKIVLDGFNLSGILDTT-SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGR 131
S+R + L LS +TT K +L +L L NN+ + + QL + ++
Sbjct: 222 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEY 281
Query: 132 NKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD----------LSRISGLLTFFAENNQL 181
N + SL L N++ L++ + + + L E+N +
Sbjct: 282 NNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDI 341
Query: 182 RGGIPEF--DFSNLLQFNVSNNNLSG 205
G NL ++SN+ S
Sbjct: 342 PGIKSNMFTGLINLKYLSLSNSFTSL 367
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 2e-13
Identities = 28/148 (18%), Positives = 48/148 (32%), Gaps = 7/148 (4%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVS-QEISNCKQLTHLYVGRNKLSGNLPDSL 142
+S I L VL L N I ++ QE + + +Y+ NK +S
Sbjct: 392 KISKIESDA-FSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSF 450
Query: 143 SKLNNLKRLDISNNNFS---SELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFN 197
+ + +L+RL + S + L NN + + L +
Sbjct: 451 ALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILD 510
Query: 198 VSNNNLSGPVPGVNGRLGADSFSGNPGL 225
+ +NNL+ N G L
Sbjct: 511 LQHNNLARLWKHANPGGPIYFLKGLSHL 538
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 2e-12
Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 21/155 (13%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSG--NLPDS 141
+ L +++ + L N + L L + R L + P
Sbjct: 416 EIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSP 475
Query: 142 LSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQL--------RGGIPEF--DF 190
L NL LD+SNNN ++ D L + L ++N L GG F
Sbjct: 476 FQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGL 535
Query: 191 SNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGL 225
S+L N+ +N + + F L
Sbjct: 536 SHLHILNLESNGFDE--------IPVEVFKDLFEL 562
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 2e-12
Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 13/134 (9%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNI--------AGTVSQEISNCKQLTHLYVGRNKLS 135
N++ I + + + L +L L+ NN+ G + L L + N
Sbjct: 491 NIANI-NDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD 549
Query: 136 GNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFS 191
+ L LK +D+ NN ++ + L + + N + + F
Sbjct: 550 EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFR 609
Query: 192 NLLQFNVSNNNLSG 205
NL + ++ N
Sbjct: 610 NLTELDMRFNPFDC 623
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 1e-10
Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 9/141 (6%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEIS----NCKQLTHLY 128
K + + ++ ++ GI + +L LSL + + + L L
Sbjct: 329 KCLEHLNMEDNDIPGI-KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILN 387
Query: 129 VGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIP 186
+ +NK+S D+ S L +L+ LD+ N EL + + + N+
Sbjct: 388 LTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTR 447
Query: 187 EF--DFSNLLQFNVSNNNLSG 205
+L + + L
Sbjct: 448 NSFALVPSLQRLMLRRVALKN 468
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 24/143 (16%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNL---------PDSLSKLNNLK 149
L LE NNI S + + +L + R+ ++ S L L+
Sbjct: 273 QLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLE 332
Query: 150 RLDISNNNFSSELPD-LSRISGLLTFFAENNQLR-GGIPEFDFSNL----LQF-NVSNNN 202
L++ +N+ + + + L N+ + F +L L N++ N
Sbjct: 333 HLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNK 392
Query: 203 LSGPVPGVNGRLGADSFSGNPGL 225
+S + +D+FS L
Sbjct: 393 ISK--------IESDAFSWLGHL 407
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 7e-10
Identities = 23/138 (16%), Positives = 42/138 (30%), Gaps = 12/138 (8%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L +L+LE N + + +L + +G N L+ + +LK L++ N
Sbjct: 536 SHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNL 595
Query: 158 FSSELPDL--SRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLG 215
+S + L N ++ F N +P L
Sbjct: 596 ITSVEKKVFGPAFRNLTELDMRFNPFDCTCE-----SIAWFVNWINETHTNIPE----LS 646
Query: 216 ADSFSGNPG-LCGKPLPN 232
+ P G P+
Sbjct: 647 SHYLCNTPPHYHGFPVRL 664
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 16/107 (14%)
Query: 123 QLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP-DLSRISGLLTFFAENNQL 181
KL+ +PD L N+ L++++N + +R S L + N +
Sbjct: 5 SHEVADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI 61
Query: 182 RGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVNGRLGADSFSGNPGL 225
+ L L+ N+ +N LS +F+ L
Sbjct: 62 S-KLEPELCQKLPMLKVLNLQHNELSQLSDK--------TFAFCTNL 99
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 3e-14
Identities = 49/220 (22%), Positives = 85/220 (38%), Gaps = 59/220 (26%)
Query: 353 LLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID-------------HV 398
LG+GK G++Y +LA+K L FK +++K H+
Sbjct: 16 PLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQLRREVEIQSHL 66
Query: 399 KHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALA 458
+HPN+L Y+ L+ EY P G+++ L + + + + +A AL+
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA-TYITELANALS 123
Query: 459 LIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISN 518
H + + H ++K N+L + E I+++G V H S
Sbjct: 124 YCHSK----RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTD---------- 166
Query: 519 QMCSTI---------------KADVYGFGVILLELLTGKL 543
+C T+ K D++ GV+ E L GK
Sbjct: 167 -LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 205
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 5e-14
Identities = 58/290 (20%), Positives = 104/290 (35%), Gaps = 55/290 (18%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY 410
+LG+G G + + D A+K++R + + + + H V+ YY
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV---RYY 68
Query: 411 CSKQEKL----------------LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVA 454
+ E+ + EY NG+L++L+H + R+ +
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH--SENLNQQRDEYWRLFRQIL 126
Query: 455 KALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLK 512
+AL+ IH + GI H +LK NI + + I ++GL V + D L +
Sbjct: 127 EALSYIHSQ----GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 513 INDISNQMCST----------------IKADVYGFGVILLELLTGKLVQNNGFNLATWVH 556
+D T K D+Y G+I E++ N+ +
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLR 242
Query: 557 SVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
SV E F E+ K+++ I+ PN+RP +
Sbjct: 243 SVSIE------FPPDFDDNKMKVEK--KIIR---LLIDHDPNKRPGARTL 281
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 8e-14
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 25/267 (9%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
+G G +G ++ DG +L K L S++ + + + +++ +KHPN++
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 408 AYYCSKQEKLL--VYEYQPNGSLFNLL-HGSENGQSFDWGSRLRVAACVAKALALIHEE- 463
+ L V EY G L +++ G++ Q D LRV + AL H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS- 522
+ H +LK N+ + + ++GL NHD SF A+T +S + +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF-AKTFVGTPYYMSPEQMNR 190
Query: 523 ---TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579
K+D++ G +L EL F+ + + F I S+
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPP-FTAFSQKELAGKIREGK-----FRR--IPYRYSD 242
Query: 580 ERMLKLLQVALRCINQSPNERPSMNQV 606
E L ++ R +N RPS+ ++
Sbjct: 243 E----LNEIITRMLNLKDYHRPSVEEI 265
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 9e-14
Identities = 19/142 (13%), Positives = 40/142 (28%), Gaps = 4/142 (2%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
+ ++ + L + + ++ + L+ L + N L L + N
Sbjct: 399 EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGN 458
Query: 133 KLSGNLP-DSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF-- 188
N + + NL LD+S + L +N L
Sbjct: 459 SFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYN 518
Query: 189 DFSNLLQFNVSNNNLSGPVPGV 210
+L + S N + +
Sbjct: 519 QLYSLSTLDCSFNRIETSKGIL 540
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 2e-12
Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 15/134 (11%)
Query: 98 QSLVVLSLEENNIAGTVSQE-ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156
+ L L + + + + ++L +L + + L +L L ++ N
Sbjct: 399 EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGN 458
Query: 157 NFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVN 211
+F + + L QL I F L LQ N+S+NNL
Sbjct: 459 SFKDNTLSNVFANTTNLTFLDLSKCQLE-QISWGVFDTLHRLQLLNMSHNNLLF------ 511
Query: 212 GRLGADSFSGNPGL 225
L + ++ L
Sbjct: 512 --LDSSHYNQLYSL 523
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 7e-11
Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 4/112 (3%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L L L I + L++L + N + P S S L +L+ L
Sbjct: 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETK 115
Query: 158 FSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSG 205
+S + ++ L +N + FSNL L ++S N +
Sbjct: 116 LASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 4e-10
Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 1/104 (0%)
Query: 80 LDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLP 139
+ G + + T +L L L + + +L L + N L
Sbjct: 455 MAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDS 514
Query: 140 DSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLR 182
++L +L LD S N + L F NN +
Sbjct: 515 SHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 1e-09
Identities = 21/146 (14%), Positives = 41/146 (28%), Gaps = 10/146 (6%)
Query: 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCK--------QLT 125
+ ++ L G S + T + L V L + EI +
Sbjct: 205 KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTID 264
Query: 126 HLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGI 185
+ + L N+ + ++ + L D+ + + QL+
Sbjct: 265 EFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY-LEDVPKHFKWQSLSIIRCQLK-QF 322
Query: 186 PEFDFSNLLQFNVSNNNLSGPVPGVN 211
P D L ++ N S V
Sbjct: 323 PTLDLPFLKSLTLTMNKGSISFKKVA 348
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLS--KLNNLKRLDISNN 156
L L+L N ++S + L++L + RN LS + S S N+L+ LD+S N
Sbjct: 329 FLKSLTLTMNKG--SISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFN 386
Query: 157 NFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVNGR 213
+ + L +++ L+ F +L L + ++S N G
Sbjct: 387 GAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDG---- 442
Query: 214 LGADSFSGNPGL 225
F G L
Sbjct: 443 ----IFLGLTSL 450
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 3e-08
Identities = 11/63 (17%), Positives = 26/63 (41%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L +L++ NN+ S + L+ L N++ + +L +++NN+
Sbjct: 497 HRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNS 556
Query: 158 FSS 160
+
Sbjct: 557 VAC 559
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 28/156 (17%), Positives = 49/156 (31%), Gaps = 15/156 (9%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAG-TVSQEISNCKQLTHLYVGR 131
S+ +V L+ + ++ + + +L L++ N I + SN L H+ +
Sbjct: 104 TSLENLVAVETKLASL-ESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162
Query: 132 NKLSGNLPDSLSKLNNLK----RLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPE 187
N + + L L LD+S N + L N I +
Sbjct: 163 NYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMK 222
Query: 188 FDFSNLLQFNV---------SNNNLSGPVPGVNGRL 214
NL +V NL P + L
Sbjct: 223 TCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGL 258
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 19/133 (14%), Positives = 38/133 (28%), Gaps = 33/133 (24%)
Query: 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152
+ ++ + ++ V +I + ++ + N L S S + L+ LD
Sbjct: 7 CIEVVPNITY-QCMDQKLS-KVPDDIPS--STKNIDLSFNPLKILKSYSFSNFSELQWLD 62
Query: 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNG 212
+S + GL +L ++ N +
Sbjct: 63 LSRCEIETIEDKA--WHGL-------------------HHLSNLILTGNPIQS------- 94
Query: 213 RLGADSFSGNPGL 225
SFSG L
Sbjct: 95 -FSPGSFSGLTSL 106
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 1e-13
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 80 LDGFNLSG--ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN 137
L L I + + + +L L L EN + ISN K LT+L + N +S
Sbjct: 267 LTELKLGANQISNISPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDI 324
Query: 138 LPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFN 197
P +S L L+RL NN S + L+ ++ + A +NQ+ P + + + Q
Sbjct: 325 SP--VSSLTKLQRLFFYNNKVSD-VSSLANLTNINWLSAGHNQISDLTPLANLTRITQLG 381
Query: 198 VSNNNLSGPVPGVNGRL 214
+++ + +
Sbjct: 382 LNDQAWTNAPVNYKANV 398
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 5e-13
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 80 LDGFNLSG--ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN 137
L+ ++S + D + + K +L L N I + + L L + N+L
Sbjct: 179 LERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNGNQLKD- 235
Query: 138 LPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFN 197
+L+ L NL LD++NN S+ L LS ++ L NQ+ P + L
Sbjct: 236 -IGTLASLTNLTDLDLANNQISN-LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLE 293
Query: 198 VSNNNLSGPVP 208
++ N L P
Sbjct: 294 LNENQLEDISP 304
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 7e-11
Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 5/121 (4%)
Query: 88 ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNN 147
+ DT S + L + I + LT + N+L+ L L
Sbjct: 36 VTDTVSQTDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSNNQLTD--ITPLKNLTK 91
Query: 148 LKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPV 207
L + ++NN + + L+ ++ L NNQ+ P + +NL + +S+N +S
Sbjct: 92 LVDILMNNNQIAD-ITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS 150
Query: 208 P 208
Sbjct: 151 A 151
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 1e-10
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+L L L N I + +S L L G L+ L L+RLDIS+N
Sbjct: 135 NLNRLELSSNTI--SDISALSGLTSLQQLSFGNQVTD---LKPLANLTTLERLDISSNKV 189
Query: 159 SSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208
S + L++++ L + A NNQ+ P +NL + +++ N L
Sbjct: 190 SD-ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGT 238
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-09
Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 7/130 (5%)
Query: 80 LDGFNLSG--ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN 137
L L I D + V L L N + + ++N + L G N++S
Sbjct: 311 LTYLTLYFNNISDISPVSSLTKLQRLFFYNNKV--SDVSSLANLTNINWLSAGHNQISD- 367
Query: 138 LPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQF 196
L+ L + +L +++ +++ + + D + +
Sbjct: 368 -LTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP 426
Query: 197 NVSNNNLSGP 206
+++ N S
Sbjct: 427 DITWNLPSYT 436
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 5e-07
Identities = 20/133 (15%), Positives = 39/133 (29%), Gaps = 8/133 (6%)
Query: 80 LDGFNLSG--ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN 137
L + D +S+ ++ LS N I + ++N ++T L + + N
Sbjct: 333 LQRLFFYNNKVSDVSSLANLTNINWLSAGHNQI--SDLTPLANLTRITQLGLNDQAWT-N 389
Query: 138 LPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPE--FDFSNLLQ 195
P + ++ + +S N E + FS +
Sbjct: 390 APVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPS-YTNEVSYTFSQPVT 448
Query: 196 FNVSNNNLSGPVP 208
SG V
Sbjct: 449 IGKGTTTFSGTVT 461
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 52/292 (17%), Positives = 118/292 (40%), Gaps = 51/292 (17%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV------- 403
EL+G G G +++ DG +KR++ ++E + ++ + + H N+
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVK---YNNEKAEREVKALAKLDHVNIVHYNGCW 73
Query: 404 ------LPPLAYYCSKQEKLLVY---EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVA 454
+ S+ + ++ E+ G+L + G+ D L + +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-KRRGEKLDKVLALELFEQIT 132
Query: 455 KALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN 514
K + IH + + + +LK +NI + + I ++GL+ + +D +L
Sbjct: 133 KGVDYIHSK----KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTL--R 186
Query: 515 DISNQMCSTI----KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570
+S + S+ + D+Y G+IL ELL V + F + + + + +
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFETSKFFTDLRD-----GIISD 238
Query: 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV---AVMINNIKEEEER 619
+ + + LLQ + +++ P +RP+ +++ + E+ ER
Sbjct: 239 IFDKKEKT------LLQ---KLLSKKPEDRPNTSEILRTLTVWKKSPEKNER 281
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 71.6 bits (175), Expect = 1e-13
Identities = 29/295 (9%), Positives = 71/295 (24%), Gaps = 52/295 (17%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS----EDFKNRMQKIDHVKHPNV--- 403
E L G ++ V ++ A+K + +S E + +
Sbjct: 68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEA 127
Query: 404 -----------------------LPPLAYYCSKQEKLLVYEYQPNGSLFNLL----HGSE 436
L P + LL+ + L L
Sbjct: 128 RDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPA-ASVDLELLFSTLDFVYV 186
Query: 437 NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496
+ + A + + A + + G+ HG+ +N+ + + + +
Sbjct: 187 FRGDEGILALHILTAQLIRLAANLQSK----GLVHGHFTPDNLFIMPDGRLMLGDVSALW 242
Query: 497 TENHDQSFLAQTSSLK--INDISNQMCSTIKADVYGFGVILLELLTGKL--VQNNGFNLA 552
+ + ++ T + + G+ + + L
Sbjct: 243 KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG 302
Query: 553 TWVHSVVREEWTVEV-FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
+W +R T + F + + + L R +
Sbjct: 303 SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNF-------DRRRRLLPLEA 350
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 2e-13
Identities = 55/291 (18%), Positives = 99/291 (34%), Gaps = 85/291 (29%)
Query: 353 LLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQK-ID---HVKHPNVLPPL 407
LLG+G +YR + GL +A+K + ++ R+Q + +KHP++L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 408 AYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAAC----VAKALALIHEE 463
Y+ LV E NG + L + F A + + +H
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLK--NRVKPFS----ENEARHFMHQIITGMLYLHSH 131
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCST 523
GI H +L +N+L NM I+++GL T +C T
Sbjct: 132 ----GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH-YT-----------LCGT 175
Query: 524 I---------------KADVYGFGVILLELLTGKL-------------VQNNGFNLATWV 555
++DV+ G + LL G+ V + + +++
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFL 235
Query: 556 HSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
++ LI +LL+ +P +R S++ V
Sbjct: 236 SIEAKD----------LIH---------QLLRR-------NPADRLSLSSV 260
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 3e-13
Identities = 58/285 (20%), Positives = 119/285 (41%), Gaps = 45/285 (15%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
+ LG G+ G ++ + +AVK ++ S+S E F + ++H ++ A
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VV 252
Query: 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAH 471
+K+ ++ E+ GSL + L E G + +A +A+ +A + + H
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAF----IEQRNYIH 307
Query: 472 GNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN----DISNQMCSTIKAD 527
+L++ NIL + ++ I+++GL ++ + + I + N TIK+D
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 367
Query: 528 VYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582
V+ FG++L+E++T G++ + N EV + RM
Sbjct: 368 VWSFGILLMEIVTYGRIPYPGMSNP------------------EVIRAL-----ERGYRM 404
Query: 583 LK-------LLQVALRCINQSPNERPSMNQVAVMINNIKEEEERS 620
+ L + +RC P ERP+ + ++++ E
Sbjct: 405 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQ 449
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 4e-13
Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 7/133 (5%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN---LPD 140
L + L VL+L + + + Q L HL + N +
Sbjct: 411 RLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTN 470
Query: 141 SLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQFN 197
SL L L+ L +S + SS + + + +N+L S+L + N
Sbjct: 471 SLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLT-SSSIEALSHLKGIYLN 529
Query: 198 VSNNNLSGPVPGV 210
+++N++S +P +
Sbjct: 530 LASNHISIILPSL 542
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 8e-13
Identities = 21/149 (14%), Positives = 47/149 (31%), Gaps = 6/149 (4%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIA--GTVSQEISNCKQLTHLYVG 130
S+ + + G L T + ++L L L ++I + ++ N L L +
Sbjct: 325 PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLS 384
Query: 131 RNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEF 188
N+ ++ + L+ LD++ + + L ++ L +
Sbjct: 385 YNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQL 444
Query: 189 --DFSNLLQFNVSNNNLSGPVPGVNGRLG 215
L N+ N+ L
Sbjct: 445 FDGLPALQHLNLQGNHFPKGNIQKTNSLQ 473
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 3e-12
Identities = 21/120 (17%), Positives = 36/120 (30%), Gaps = 5/120 (4%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
S L N + + S LT L + R ++ D+ + L L ++ N
Sbjct: 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93
Query: 159 SSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVNGRL 214
LS L F + I N L+ + +N++S
Sbjct: 94 IFMAETALSGPKALKHLFFIQTGIS-SIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPT 152
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 8e-12
Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 9/131 (6%)
Query: 84 NLSG----ILDTTSVCKTQSLVVLSLEENNIAGTVSQE---ISNCKQLTHLYVGRNKLSG 136
NLS I +L L+L+ N+ Q+ + +L L + LS
Sbjct: 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS 490
Query: 137 NLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLL 194
+ + L + +D+S+N +S + + +N + +P S
Sbjct: 491 IDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNHISIILPSLLPILSQQR 550
Query: 195 QFNVSNNNLSG 205
N+ N L
Sbjct: 551 TINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 1e-11
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 6/116 (5%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
++L L + I+ + N K L LY+G N +S LK LD NN
Sbjct: 105 KALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNA 164
Query: 158 FSS----ELPDLSRISGLLTFFAENNQLRGGIPE-FDFSNLLQFNVSNNNLSGPVP 208
++ L + + L+ N + G P FD + N +
Sbjct: 165 IHYLSKEDMSSLQQAT-NLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIF 219
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 2e-11
Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 12/157 (7%)
Query: 74 SVRKIVLDGFNLSGILDTT-SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
S+ + + I S+ ++L+++ S L L +
Sbjct: 229 SLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTAT 288
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFS 191
LS LP L L+ LK+L +S N F + S L + N R +
Sbjct: 289 HLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLE 347
Query: 192 NL--LQF-NVSNNNLSGPVPGVNGRLGADSFSGNPGL 225
NL L+ ++S++++ L
Sbjct: 348 NLENLRELDLSHDDIETS------DCCNLQLRNLSHL 378
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 1e-10
Identities = 33/158 (20%), Positives = 47/158 (29%), Gaps = 16/158 (10%)
Query: 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK 133
SV I L I T C L L L +++ + + L L + NK
Sbjct: 255 SVESINLQKHYFFNISSNTFHC-FSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANK 312
Query: 134 LSGNLPDSLSKLNNLKRLDISNNNFSSELPD--LSRISGLLTFFAENNQLRG-GIPEFDF 190
S S +L L I N EL L + L ++ +
Sbjct: 313 FENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQL 372
Query: 191 SNLLQ---FNVSNNNLSGPVPGVNGRLGADSFSGNPGL 225
NL N+S N L ++F P L
Sbjct: 373 RNLSHLQSLNLSYNEPLS--------LKTEAFKECPQL 402
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 9e-10
Identities = 20/147 (13%), Positives = 43/147 (29%), Gaps = 13/147 (8%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCK--QLTHLYVGRNKLSGNLPDS 141
NL I QSL + + E+ + + + + ++ ++
Sbjct: 214 NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNT 273
Query: 142 LSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NV 198
+ L+ LD++ + S L +S L N+ + + SN L ++
Sbjct: 274 FHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFE-NLCQISASNFPSLTHLSI 332
Query: 199 SNNNLSGPVPGVNGRLGADSFSGNPGL 225
N + L
Sbjct: 333 KGNTKRLELG-------TGCLENLENL 352
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 8e-09
Identities = 22/144 (15%), Positives = 49/144 (34%), Gaps = 7/144 (4%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
K+++ + +S I D + ++L L L N+I+ + ++L L N
Sbjct: 105 KALKHLFFIQTGISSI-DFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNN 163
Query: 133 KLSGNLPDSLSKLNNLKR--LDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPE--- 187
+ + +S L L+++ N+ + P + + Q I +
Sbjct: 164 AIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLK 223
Query: 188 -FDFSNLLQFNVSNNNLSGPVPGV 210
+L + + P V
Sbjct: 224 NSTIQSLWLGTFEDMDDEDISPAV 247
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 5e-13
Identities = 52/285 (18%), Positives = 103/285 (36%), Gaps = 48/285 (16%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVK--RLRDWSISSEDFKNRMQKIDHVKHPNVL---- 404
+ LGRG G ++ D A+K RL + ++ E ++ + ++HP ++
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 405 -----PPLAYYCSKQEKLLVY---EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKA 456
K+ +Y + +L + ++G + + L + +A+A
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 457 LALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDI 516
+ +H + G+ H +LK +NI F + + ++GL+ + D+ + +
Sbjct: 131 VEFLHSK----GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 517 SNQMCST---------------IKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE 561
T K D++ G+IL ELL Q T VR
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLT----DVRN 242
Query: 562 EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
+F + E ++Q ++ SP ERP +
Sbjct: 243 LKFPPLFTQKY-----PCEY--VMVQ---DMLSPSPMERPEAINI 277
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 70.1 bits (171), Expect = 7e-13
Identities = 38/349 (10%), Positives = 91/349 (26%), Gaps = 76/349 (21%)
Query: 304 SSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLY 363
++ TS+ + + + L +LG+ +
Sbjct: 43 TTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRG-------TVLGQEDPYAYL 95
Query: 364 RVV-LDDGLMLAVKRLRDWSISSEDFKNRMQK--------------------------ID 396
+ G V + +M++ D
Sbjct: 96 EATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155
Query: 397 HVKHPNVLPPLAYYCSKQEKLLVYEY----QPNGSLFN----LLHGSENGQSFDWGSRLR 448
VK P + +++ ++ + + +L LL S +S +RL+
Sbjct: 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQ 215
Query: 449 VAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQT 508
+ V + LA +H G+ H L+ +I+ + ++ + +V +
Sbjct: 216 LTLQVIRLLASLHHY----GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGR 271
Query: 509 ---------SSLKINDISNQMCSTIKADVYGFGVILLELLTGKL--VQNNGFNLATWVHS 557
+ + T D + G+ + + L + + W+
Sbjct: 272 GFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR 331
Query: 558 VVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
+ I + LL+ + +R Q
Sbjct: 332 SCKN-----------IPQPVRA-----LLE---GFLRYPKEDRLLPLQA 361
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 8e-13
Identities = 60/313 (19%), Positives = 111/313 (35%), Gaps = 55/313 (17%)
Query: 323 SGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDW 381
S + ++ + + + LG G + V L DG A+KR+
Sbjct: 11 SSGRENLYFQGHMVIIDNKHYLFI-----QKLGEGGFSYVDLVEGLHDGHFYALKRIL-- 63
Query: 382 SISSEDFKNRMQK-ID---HVKHPNVLPPLAYYC----SKQEKLLVYEYQPNGSLFNLL- 432
+ + Q+ D HPN+L +AY +K E L+ + G+L+N +
Sbjct: 64 -CHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIE 122
Query: 433 HGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEY 492
+ G L + + + L IH + G AH +LK NIL + +P + +
Sbjct: 123 RLKDKGNFLTEDQILWLLLGICRGLEAIHAK----GYAHRDLKPTNILLGDEGQPVLMDL 178
Query: 493 GLIVTENHDQSFLAQTSSLKIND-------------ISNQMCSTI--KADVYGFGVILLE 537
G + Q +L+ S Q I + DV+ G +L
Sbjct: 179 GSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYA 238
Query: 538 LLTGKL----VQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCI 593
++ G+ V G ++A V+ + ++ S L Q+ +
Sbjct: 239 MMFGEGPYDMVFQKGDSVA----LAVQNQLSIPQSPRH------SSA----LWQLLNSMM 284
Query: 594 NQSPNERPSMNQV 606
P++RP + +
Sbjct: 285 TVDPHQRPHIPLL 297
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 8e-13
Identities = 52/322 (16%), Positives = 118/322 (36%), Gaps = 53/322 (16%)
Query: 306 VHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRV 365
+H + S + + + S V + L + +G G +++V
Sbjct: 1 MHHHHHHSSGVDLGTENL--------YFQSMSVKGRIYSIL-----KQIGSGGSSKVFQV 47
Query: 366 VLDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPN--VLPPLAYYCSKQEKLLVY 420
+ + + A+K + ++ + +I ++ + ++ Y + Q +V
Sbjct: 48 LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107
Query: 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNIL 480
E N L + L +S D R + +A+ IH+ GI H +LK N L
Sbjct: 108 ECG-NIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH----GIVHSDLKPANFL 159
Query: 481 FNNNMEPCISEYGL-IVTENHDQSFLAQT---------------SSLKINDISNQMCSTI 524
+ M + ++G+ + S + + S + ++ +
Sbjct: 160 IVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 218
Query: 525 KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584
K+DV+ G IL + GK N + +H+++ +E F ++ +
Sbjct: 219 KSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE-FPDIPEKDLQD------ 271
Query: 585 LLQVALRCINQSPNERPSMNQV 606
+L+ C+ + P +R S+ ++
Sbjct: 272 VLK---CCLKRDPKQRISIPEL 290
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 8e-13
Identities = 56/245 (22%), Positives = 98/245 (40%), Gaps = 64/245 (26%)
Query: 328 SSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSE 386
++L + K F+ + R LG+GK G++Y + ++A+K L
Sbjct: 1 TALAEMPKRKFTIDDFD-IGR----PLGKGKFGNVYLAREKQNKFIMALKVL-------- 47
Query: 387 DFKNRMQKID-------------HVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLH 433
FK++++K H++HPN+L Y+ ++ L+ E+ P G L+ L
Sbjct: 48 -FKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL- 105
Query: 434 GSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYG 493
++G+ + S +A AL HE + H ++K N+L E I+++G
Sbjct: 106 -QKHGRFDEQRSA-TFMEELADALHYCHER----KVIHRDIKPENLLMGYKGELKIADFG 159
Query: 494 LIVTENHDQSFLAQTSSLKINDISNQMCSTI---------------KADVYGFGVILLEL 538
V H S +T MC T+ K D++ GV+ E
Sbjct: 160 WSV---HAPSLRRRT-----------MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEF 205
Query: 539 LTGKL 543
L G
Sbjct: 206 LVGMP 210
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 1e-12
Identities = 20/137 (14%), Positives = 34/137 (24%), Gaps = 15/137 (10%)
Query: 80 LDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLP 139
G L D V L L + + L H+ + L LP
Sbjct: 63 RTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELP 120
Query: 140 DSLSKLNNLKRLDISNNNFSSELP------------DLSRISGLLTFFAENNQLRGGIPE 187
D++ + L+ L ++ N + LP + L
Sbjct: 121 DTMQQFAGLETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179
Query: 188 FDFSNLLQFNVSNNNLS 204
NL + +
Sbjct: 180 QGLVNLQSLRLEWTGIR 196
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 15/124 (12%)
Query: 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152
+ L ++++ + + + L L + RN L LP S++ LN L+ L
Sbjct: 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156
Query: 153 ISNNNFSSELPD----------LSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSN 200
I +ELP+ + L + E +R +P + NL + N
Sbjct: 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRN 215
Query: 201 NNLS 204
+ LS
Sbjct: 216 SPLS 219
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 8e-10
Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 5/111 (4%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYV-GR 131
++++ + + LS + ++ L L L L L +
Sbjct: 206 QNLKSLKIRNSPLSALGP--AIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDC 263
Query: 132 NKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQL 181
+ L LP + +L L++LD+ S LP ++++ +
Sbjct: 264 SNLL-TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-09
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 12/121 (9%)
Query: 93 SVCKTQSLVVLSLEENNI---------AGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLS 143
S+ L LS+ + S E L L + + +LP S++
Sbjct: 145 SIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIA 203
Query: 144 KLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNN 201
L NLK L I N+ S+ P + + L P + L + + +
Sbjct: 204 NLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDC 263
Query: 202 N 202
+
Sbjct: 264 S 264
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152
L L L++ + T+ +I QL L + LP +++L +
Sbjct: 248 IFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIIL 307
Query: 153 ISNNNFSSELPD 164
+ + ++L
Sbjct: 308 VP-PHLQAQLDQ 318
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-12
Identities = 17/107 (15%), Positives = 41/107 (38%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+L L + ++ +S LT L + + ++ ++ L + +D+S N
Sbjct: 89 NLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA 148
Query: 159 SSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205
+++ L + L + + + + DF L Q + + G
Sbjct: 149 ITDIMPLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 3e-05
Identities = 6/63 (9%), Positives = 19/63 (30%), Gaps = 3/63 (4%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+ + L N + + +L L + + + + + L +L +
Sbjct: 137 KVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVH-DY-RGIEDFPKLNQLYAFSQTI 193
Query: 159 SSE 161
+
Sbjct: 194 GGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 6e-04
Identities = 15/109 (13%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
++ + L +++ A +++ + LT++ + ++ +L + +N+K L I+N +
Sbjct: 23 KAYLNGLLGQSSTA-NITE--AQMNSLTYITLANINVT-DL-TGIEYAHNIKDLTINNIH 77
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLS 204
++ +S +S L + ++L ++S++
Sbjct: 78 ATN-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHD 125
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 54/268 (20%), Positives = 113/268 (42%), Gaps = 36/268 (13%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
+ +G G G V +DG +K + +SS++ + +++ ++KHPN++
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV--- 86
Query: 408 AYYCSKQEKLLVY---EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
Y S +E +Y +Y G LF ++ ++ G F L + AL +H+
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRIN-AQKGVLFQEDQILDWFVQICLALKHVHDR- 144
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISNQMCS 522
I H ++KS NI + + ++G+ ++ + LA+ +S ++C
Sbjct: 145 ---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE---LARACIGTPYYLSPEICE 198
Query: 523 ----TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578
K+D++ G +L EL T K ++ V ++ + ++ S
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAF-EAGSMKNLVLKIISGSFPP-------VSLHYS 250
Query: 579 EERMLKLLQVALRCINQSPNERPSMNQV 606
+ L + + ++P +RPS+N +
Sbjct: 251 YD----LRSLVSQLFKRNPRDRPSVNSI 274
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 61/288 (21%), Positives = 120/288 (41%), Gaps = 37/288 (12%)
Query: 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY 410
LG G++G +Y V L +AVK L++ ++ E+F + +KHPN++ L
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG-V 284
Query: 411 CSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
C+++ ++ E+ G+L + L N Q L +A ++ A+ + ++
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 339
Query: 470 AHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDIS----NQMCSTIK 525
H NL + N L N ++++GL D + I + +IK
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 399
Query: 526 ADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK- 584
+DV+ FGV+L E+ T + G +L+ +V++ + + RM +
Sbjct: 400 SDVWAFGVLLWEIATYGMSPYPGIDLS-------------QVYELL-----EKDYRMERP 441
Query: 585 ------LLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSISSEAR 626
+ ++ C +P++RPS ++ + +E S E
Sbjct: 442 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 489
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 2e-12
Identities = 41/254 (16%), Positives = 88/254 (34%), Gaps = 37/254 (14%)
Query: 372 MLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPP-LAYYCSKQEKLLVY---EYQPNGS 427
+ DW +SS + P + K+ +Y + +
Sbjct: 88 IWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKEN 147
Query: 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEP 487
L + ++ + + + G L + +A+A+ +H + G+ H +LK +NI F +
Sbjct: 148 LKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK----GLMHRDLKPSNIFFTMDDVV 203
Query: 488 CISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTI---------------KADVYGFG 532
+ ++GL+ + D+ + + T K D++ G
Sbjct: 204 KVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLG 263
Query: 533 VILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRC 592
+IL ELL + + V ++ +F + +E ++Q
Sbjct: 264 LILFELLYSF---STQMERVRIITDVRNLKFP-LLFTQKY-----PQEH--MMVQ---DM 309
Query: 593 INQSPNERPSMNQV 606
++ SP ERP +
Sbjct: 310 LSPSPTERPEATDI 323
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 2e-12
Identities = 52/332 (15%), Positives = 124/332 (37%), Gaps = 49/332 (14%)
Query: 296 NSNKRSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLG 355
+ K ++ + R + + D ++S++ + V + L + +G
Sbjct: 15 SGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECI----SVKGRIYSIL-----KQIG 65
Query: 356 RGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK---HPN--VLPPLAYY 410
G +++V+ + + A+K + ++ + +I ++ + ++ Y
Sbjct: 66 SGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 125
Query: 411 CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470
+ Q +V E N L + L +S D R + +A+ IH+ GI
Sbjct: 126 ITDQYIYMVMEC-GNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH----GIV 177
Query: 471 HGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLA--------------QTSSLKIN 514
H +LK N L + M + ++G+ + + + S
Sbjct: 178 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRE 236
Query: 515 DISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574
+ ++ + K+DV+ G IL + GK N + +H+++ +E F ++
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE-FPDIPEK 295
Query: 575 EAASEERMLKLLQVALRCINQSPNERPSMNQV 606
+ +L+ C+ + P +R S+ ++
Sbjct: 296 DLQD------VLK---CCLKRDPKQRISIPEL 318
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 4e-12
Identities = 58/338 (17%), Positives = 110/338 (32%), Gaps = 86/338 (25%)
Query: 306 VHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRV 365
+H + S ++ + +TS K + + ++ LG G +G +
Sbjct: 1 MHHHHHHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVK----KLGSGAYGEVLLC 56
Query: 366 V-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPLAYYCSKQEKLLVYE 421
+ A+K +R S+S+ ++++ + HPN++ ++ K+ LV E
Sbjct: 57 RDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116
Query: 422 YQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK----ALALIHEELREDGIAHGN 473
G LF+ + +E AA + K + +H+ I H +
Sbjct: 117 CYKGGELFDEIIHRMKFNE-----------VDAAVIIKQVLSGVTYLHKH----NIVHRD 161
Query: 474 LKSNNILFNNNMEPC---ISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTI------ 524
LK N+L + + I ++GL + + + T
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLSAVFENQKKM-------------KERLGTAYYIAPE 208
Query: 525 --------KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576
K DV+ GVIL LL G F T E+ +V +
Sbjct: 209 VLRKKYDEKCDVWSIGVILFILLAGYP----PFGGQT----------DQEILRKVEKGKY 254
Query: 577 ASEERMLK--------LLQVALRCINQSPNERPSMNQV 606
+ K L++ + + R S Q
Sbjct: 255 TFDSPEWKNVSEGAKDLIK---QMLQFDSQRRISAQQA 289
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 5e-12
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 80 LDGFNLSG--ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN 137
L+ + I D + + L L + N I + + + +L L VG N++S
Sbjct: 223 LNSLKIGNNKITDLSPLANLSQLTWLEIGTNQI--SDINAVKDLTKLKMLNVGSNQISD- 279
Query: 138 LPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQF 196
L+ L+ L L ++NN +E + + ++ L T F N + P S +
Sbjct: 280 -ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSA 338
Query: 197 NVSNNNLS 204
+ +N +
Sbjct: 339 DFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 1e-11
Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Query: 84 NLSG--ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDS 141
NL+G I D + + L L + N I T + N L LY+ + +S
Sbjct: 72 NLNGNQITDISPLSNLVKLTNLYIGTNKI--TDISALQNLTNLRELYLNEDNISD--ISP 127
Query: 142 LSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFD-FSNLLQFNVSN 200
L+ L + L++ N+ S+L LS ++GL ++++ + ++L +++
Sbjct: 128 LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVK-DVTPIANLTDLYSLSLNY 186
Query: 201 NNLSG 205
N +
Sbjct: 187 NQIED 191
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 1e-11
Identities = 21/108 (19%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+L L L E+NI + ++N ++ L +G N + LS + L L ++ +
Sbjct: 110 TNLRELYLNEDNI--SDISPLANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESK 166
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205
+ ++ ++ L + NQ+ P ++L F N ++
Sbjct: 167 VKD-VTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITD 213
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 2e-11
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 7/118 (5%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
SL + N I T ++N +L L +G NK++ L+ L+ L L+I N
Sbjct: 199 TSLHYFTAYVNQI--TDITPVANMTRLNSLKIGNNKITD--LSPLANLSQLTWLEIGTNQ 254
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFD-FSNLLQFNVSNNNLSGPVPGVNGRL 214
S + + ++ L +NQ+ I + S L ++NN L V G L
Sbjct: 255 ISD-INAVKDLTKLKMLNVGSNQIS-DISVLNNLSQLNSLFLNNNQLGNEDMEVIGGL 310
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 60.2 bits (147), Expect = 6e-10
Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+S+ L + + Q I L +L + N+++ LS L L L I N
Sbjct: 44 ESITKLVVAGEKV--ASIQGIEYLTNLEYLNLNGNQITD--ISPLSNLVKLTNLYIGTNK 99
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNG 212
+ + L ++ L + + + P + + + N+ N+ + ++
Sbjct: 100 ITD-ISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSN 153
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 6e-12
Identities = 49/291 (16%), Positives = 110/291 (37%), Gaps = 45/291 (15%)
Query: 337 KVNKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKID 396
V + L + +G G +++V+ + + A+K + ++ + +I
Sbjct: 5 SVKGRIYSIL-----KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 59
Query: 397 ---HVKHPN--VLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAA 451
++ + ++ Y + Q +V E N L + L +S D R
Sbjct: 60 YLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLK---KKKSIDPWERKSYWK 115
Query: 452 CVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL-IVTENHDQSFLAQT-- 508
+ +A+ IH+ GI H +LK N L + M + ++G+ + S + +
Sbjct: 116 NMLEAVHTIHQH----GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV 170
Query: 509 -------------SSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWV 555
S + ++ + K+DV+ G IL + GK N + +
Sbjct: 171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 230
Query: 556 HSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
H+++ +E F ++ + +L+ C+ + P +R S+ ++
Sbjct: 231 HAIIDPNHEIE-FPDIPEKDLQD------VLK---CCLKRDPKQRISIPEL 271
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 9e-12
Identities = 59/300 (19%), Positives = 120/300 (40%), Gaps = 61/300 (20%)
Query: 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY 410
LG G++G +Y V L +AVK L++ ++ E+F + +KHPN++ L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG-V 77
Query: 411 CSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
C+++ ++ E+ G+L + L N Q L +A ++ A+ L +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEY----LEKKNF 132
Query: 470 AHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSL---------KINDISN 518
H +L + N L N ++++GL ++ ++ A + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAY--- 186
Query: 519 QMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWTVEVFDEVLI 573
+IK+DV+ FGV+L E+ T G + + +V++ +
Sbjct: 187 -NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------------------QVYELL-- 225
Query: 574 AEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSISSEAR 626
+ RM + + ++ C +P++RPS ++ + +E S E
Sbjct: 226 ---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 282
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 1e-11
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 88 ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNN 147
I D T + +L VL L+ N I T ++ L +L +G ++S +L L+ L+
Sbjct: 119 ITDVTPLAGLSNLQVLYLDLNQI--TNISPLAGLTNLQYLSIGNAQVS-DL-TPLANLSK 174
Query: 148 LKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPV 207
L L +N S + L+ + L+ +NNQ+ P + SNL ++N ++
Sbjct: 175 LTTLKADDNKISD-ISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQP 233
Query: 208 PGVNGRL 214
N L
Sbjct: 234 VFYNNNL 240
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 4e-10
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 8/131 (6%)
Query: 80 LDGFNLSG--ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN 137
L L I + + + +L LS+ + + ++N +LT L NK+S +
Sbjct: 131 LQVLYLDLNQITNISPLAGLTNLQYLSIGNAQV--SDLTPLANLSKLTTLKADDNKIS-D 187
Query: 138 LPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFN 197
+ L+ L NL + + NN S + L+ S L N + P F +NL+ N
Sbjct: 188 IS-PLASLPNLIEVHLKNNQISD-VSPLANTSNLFIVTLTNQTITN-QPVFYNNNLVVPN 244
Query: 198 VSNNNLSGPVP 208
V P+
Sbjct: 245 VVKGPSGAPIA 255
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 3e-09
Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
+ + G ++ I V +L+ L L++N I T + N ++T L + N
Sbjct: 41 DGITTLSAFGTGVTTI---EGVQYLNNLIGLELKDNQI--TDLAPLKNLTKITELELSGN 95
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFD-FS 191
L +++ L ++K LD+++ +++ L+ +S L + + NQ+ I +
Sbjct: 96 PLKN--VSAIAGLQSIKTLDLTSTQI-TDVTPLAGLSNLQVLYLDLNQIT-NISPLAGLT 151
Query: 192 NLLQFNVSNNNLS 204
NL ++ N +S
Sbjct: 152 NLQYLSIGNAQVS 164
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 10/87 (11%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 118 ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAE 177
+ G++ ++ + + L+ + L ++ + + ++ L+ +
Sbjct: 15 DPALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVTT-IEGVQYLNNLIGLELK 71
Query: 178 NNQLRGGIPEFDFSNLLQFNVSNNNLS 204
+NQ+ P + + + + +S N L
Sbjct: 72 DNQITDLAPLKNLTKITELELSGNPLK 98
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 1e-11
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 9/109 (8%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L L + N + E+ N L + V N L LPD +L+ + NN
Sbjct: 131 PLLEYLGVSNNQL--EKLPELQNSSFLKIIDVDNNSLK-KLPDLPP---SLEFIAAGNNQ 184
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGP 206
ELP+L + L +A+NN L+ +P+ +L NN L
Sbjct: 185 L-EELPELQNLPFLTAIYADNNSLK-KLPDL-PLSLESIVAGNNILEEL 230
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 4e-11
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
SL ++ N + E+ N LT +Y N L LPD +L+ + NN
Sbjct: 174 SLEFIAAGNNQL--EELPELQNLPFLTAIYADNNSLK-KLPDLPL---SLESIVAGNNIL 227
Query: 159 SSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
ELP+L + L T +A+NN L+ +P+ +L NV +N L+
Sbjct: 228 -EELPELQNLPFLTTIYADNNLLK-TLPDL-PPSLEALNVRDNYLT 270
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 23/126 (18%)
Query: 95 CKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDIS 154
C + L L + ++ + + L L N L+ LP+ L +L + +
Sbjct: 68 CLDRQAHELELNNLGL-SSLPELPPH---LESLVASCNSLT-ELPELPQSLKSLLVDNNN 122
Query: 155 NNNFSS----------------ELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNV 198
S +LP+L S L +NN L+ +P+ +L
Sbjct: 123 LKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLPDL-PPSLEFIAA 180
Query: 199 SNNNLS 204
NN L
Sbjct: 181 GNNQLE 186
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 26/108 (24%), Positives = 38/108 (35%), Gaps = 11/108 (10%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L + + N++ + L + G N L L L L + NN
Sbjct: 195 PFLTAIYADNNSL----KKLPDLPLSLESIVAGNNILE--ELPELQNLPFLTTIYADNNL 248
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205
+ LPDL L +N L +PE +L +VS N SG
Sbjct: 249 LKT-LPDL--PPSLEALNVRDNYLT-DLPE-LPQSLTFLDVSENIFSG 291
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
SL + N + E+ N LT +Y N L LPD +L+ L++ +N
Sbjct: 215 LSLESIVAGNNIL--EELPELQNLPFLTTIYADNNLLK-TLPDLPP---SLEALNVRDNY 268
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
+ LP+L L N G+ E NL N S+N +
Sbjct: 269 LTD-LPEL--PQSLTFLDVSENIFS-GLSEL-PPNLYYLNASSNEIR 310
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 20/159 (12%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
++ + + + D SL L++ N + + L L N
Sbjct: 297 PNLYYLNASSNEIRSLCDLPP-----SLEELNVSNNKLI-ELPALPPR---LERLIASFN 347
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSN 192
L+ +P+ NLK+L + N PD+ + N+ L +PE N
Sbjct: 348 HLA-EVPELPQ---NLKQLHVEYNPLRE-FPDIP---ESVEDLRMNSHL-AEVPEL-PQN 397
Query: 193 LLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLP 231
L Q +V N L P + + + +
Sbjct: 398 LKQLHVETNPLRE-FPDIPESVEDLRMNSERVVDPYEFA 435
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 21/120 (17%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLN------------ 146
SL L++ +N + + + + L + LS LP +L LN
Sbjct: 258 SLEALNVRDNYLT-DLPELPQSLTFLDVSENIFSGLS-ELPPNLYYLNASSNEIRSLCDL 315
Query: 147 --NLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
+L+ L++SNN LP L L A N L +PE NL Q +V N L
Sbjct: 316 PPSLEELNVSNNKLIE-LPAL--PPRLERLIASFNHLA-EVPEL-PQNLKQLHVEYNPLR 370
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 19/119 (15%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKL------------- 145
L +N+ + E N K T Y ++ N P +
Sbjct: 12 FLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD 70
Query: 146 NNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
L+++N SS LP+L L + A N L +PE +L V NNNL
Sbjct: 71 RQAHELELNNLGLSS-LPEL--PPHLESLVASCNSLT-ELPE-LPQSLKSLLVDNNNLK 124
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 27/145 (18%), Positives = 41/145 (28%), Gaps = 40/145 (27%)
Query: 93 SVCKTQSLVVLSLEENNIAGTVSQEISN-------------CKQLTHLYVGRNKLSGNLP 139
+S + +Q L + LS +LP
Sbjct: 29 EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLP 87
Query: 140 DSLSKLNNLKRLDISNNNFSS-------------------ELPDLSRISGLLTFFAENNQ 180
+ +L+ L S N+ + L DL L NNQ
Sbjct: 88 ELPP---HLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDL--PPLLEYLGVSNNQ 142
Query: 181 LRGGIPEF-DFSNLLQFNVSNNNLS 204
L +PE + S L +V NN+L
Sbjct: 143 LE-KLPELQNSSFLKIIDVDNNSLK 166
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 5e-05
Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 27/124 (21%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKL------------ 145
L L N++A V + N L L+V N L PD +
Sbjct: 337 PRLERLIASFNHLA-EVPELPQN---LKQLHVEYNPLR-EFPDIPESVEDLRMNSHLAEV 391
Query: 146 ----NNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNL--LQFNVS 199
NLK+L + N PD+ + + ++ EF L+ +V
Sbjct: 392 PELPQNLKQLHVETNPLRE-FPDI--PESVEDLRMNSERVV-DPYEFAHETTDKLEDDVF 447
Query: 200 NNNL 203
++
Sbjct: 448 EHHH 451
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 1e-11
Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 7/160 (4%)
Query: 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRN 132
+ I L L + + + L +L L +N + + S L L++G N
Sbjct: 402 TANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGEN 461
Query: 133 KL-----SGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIP 186
L + D L++L+ L +++N +S P S ++ L +N+L
Sbjct: 462 MLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSH 521
Query: 187 EFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLC 226
+NL ++S N L P P V L + N +C
Sbjct: 522 NDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFIC 561
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 6e-11
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 7/137 (5%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEI-----SNCKQLTHL 127
++ ++L+ S + + SL L L EN + E+ L L
Sbjct: 426 PHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVL 485
Query: 128 YVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPE 187
Y+ N L+ P S L L+ L +++N + L + L NQL
Sbjct: 486 YLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTV-LSHNDLPANLEILDISRNQLL-APNP 543
Query: 188 FDFSNLLQFNVSNNNLS 204
F +L ++++N
Sbjct: 544 DVFVSLSVLDITHNKFI 560
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 2e-08
Identities = 26/152 (17%), Positives = 47/152 (30%), Gaps = 23/152 (15%)
Query: 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK 133
SVR + L + + L VL+L N I + L L + N
Sbjct: 267 SVRHLDLSHGFVFSLNSRVFETLK-DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNL 325
Query: 134 LSGNLPDSLSKLNNLKRLDISNNNFSS--------------------ELPDLSRISGLLT 173
L + L + +D+ N+ + L + I +
Sbjct: 326 LGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPD 385
Query: 174 FFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205
F N+L +P+ + + ++S N L
Sbjct: 386 IFLSGNKLV-TLPKINLT-ANLIHLSENRLEN 415
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 2e-08
Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 7/114 (6%)
Query: 98 QSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156
+ L +L L T+ +E N L L +G +K+ PD+ L +L L +
Sbjct: 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFC 107
Query: 157 NFSSELPD---LSRISGLLTFFAENNQLRGGIPEFDFSNLLQF---NVSNNNLS 204
S + + L NQ+R F L + S+N +
Sbjct: 108 GLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 26/179 (14%), Positives = 57/179 (31%), Gaps = 35/179 (19%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQ--LTHLYVG 130
K++ ++ L + + S K SL + N I E+ + L+ +
Sbjct: 123 KALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182
Query: 131 RNKLSGNLPDSLSKLNN------LKRLDISNNNFSSELPD-------------LSRISGL 171
N L + K N L+ LD+S N ++ ++ L +
Sbjct: 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242
Query: 172 LTFFAENNQLRGGIPEFDF-----SNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGL 225
+ + ++ + F S++ ++S+ + L + F L
Sbjct: 243 MGAGFGFHNIK-DPDQNTFAGLARSSVRHLDLSHGFVF--------SLNSRVFETLKDL 292
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 3e-04
Identities = 19/117 (16%), Positives = 38/117 (32%), Gaps = 24/117 (20%)
Query: 113 TVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP-DLSRISGL 171
+ I+ + L+ +P L+ +RL +S N + + L
Sbjct: 3 SFDGRIAFYR--------FCNLT-QVPQVLN---TTERLLLSFNYIRTVTASSFPFLEQL 50
Query: 172 LTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVNGRLGADSFSGNPGL 225
+ I + F NL L+ ++ ++ + L D+F G L
Sbjct: 51 QLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIY--------FLHPDAFQGLFHL 99
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 64.4 bits (156), Expect = 5e-11
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 5/127 (3%)
Query: 88 ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNN 147
I D +S+ + L LSLE N I + + + QL LY+G NK++ LS+L
Sbjct: 99 IKDLSSLKDLKKLKSLSLEHNGI--SDINGLVHLPQLESLYLGNNKITD--ITVLSRLTK 154
Query: 148 LKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPV 207
L L + +N S + L+ ++ L + N + NL + +
Sbjct: 155 LDTLSLEDNQISD-IVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKP 213
Query: 208 PGVNGRL 214
L
Sbjct: 214 INHQSNL 220
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 54.7 bits (131), Expect = 6e-08
Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Query: 87 GILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLN 146
+ D + + S+ + ++I Q I +T L++ NKL+ ++ L+ L
Sbjct: 32 SVTDAVTQNELNSIDQIIANNSDI--KSVQGIQYLPNVTKLFLNGNKLT-DIKP-LTNLK 87
Query: 147 NLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
NL L + N L L + L + E+N + L + NN ++
Sbjct: 88 NLGWLFLDENKIKD-LSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKIT 144
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 54.0 bits (129), Expect = 1e-07
Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 7/175 (4%)
Query: 80 LDGFNLSG--ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN 137
L+ L I D T + + L LSLE+N I + ++ +L +LY+ +N +S +
Sbjct: 133 LESLYLGNNKITDITVLSRLTKLDTLSLEDNQI--SDIVPLAGLTKLQNLYLSKNHIS-D 189
Query: 138 LPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQF 196
L +L+ L NL L++ + ++ + S + T + L D + +
Sbjct: 190 L-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKP 248
Query: 197 NVSNNNLSGPVPGVNGRLGADSFSGNPGLCGKPLPNACPPTPPPIKESKGSSTNQ 251
NV + + + + G+
Sbjct: 249 NVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKEVYTVSYDVDGTVIKT 303
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 5e-06
Identities = 11/87 (12%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 118 ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAE 177
+ + + ++ + ++LN++ ++ +N++ S + + + + F
Sbjct: 17 DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQGIQYLPNVTKLFLN 73
Query: 178 NNQLRGGIPEFDFSNLLQFNVSNNNLS 204
N+L P + NL + N +
Sbjct: 74 GNKLTDIKPLTNLKNLGWLFLDENKIK 100
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 5e-11
Identities = 28/135 (20%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 70 SRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYV 129
+ + +G LD V L +L + I ++S +L +LY+
Sbjct: 272 THNTQLIYFQAEGCRKIKELD---VTHNTQLYLLDCQAAGIT---ELDLSQNPKLVYLYL 325
Query: 130 GRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFD 189
+L+ L +S LK L N + + +I L F Q E
Sbjct: 326 NNTELT-ELD--VSHNTKLKSLSCVNAHIQD-FSSVGKIPALNNNFEAEGQTITMPKETL 381
Query: 190 FSNLLQFNVSNNNLS 204
+N L VS + L
Sbjct: 382 TNNSLTIAVSPDLLD 396
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 9/129 (6%)
Query: 76 RKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS 135
V F + DT S + +L L ++I T I LT L N ++
Sbjct: 21 ASEVAAAFEMQ-ATDTISEEQLATLTSLDCHNSSI--TDMTGIEKLTGLTKLICTSNNIT 77
Query: 136 GNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQ 195
L LS+ NL L +N ++ D++ ++ L + N+L + L
Sbjct: 78 -TLD--LSQNTNLTYLACDSNKLTN--LDVTPLTKLTYLNCDTNKLT-KLDVSQNPLLTY 131
Query: 196 FNVSNNNLS 204
N + N L+
Sbjct: 132 LNCARNTLT 140
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 12/139 (8%)
Query: 70 SRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYV 129
+ ++ + +++ + T + K L L NNI + ++S LT+L
Sbjct: 39 EQLATLTSLDCHNSSITDM---TGIEKLTGLTKLICTSNNI---TTLDLSQNTNLTYLAC 92
Query: 130 GRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFD 189
NKL+ NL ++ L L L+ N + D+S+ L N L I
Sbjct: 93 DSNKLT-NLD--VTPLTKLTYLNCDTNKLTKL--DVSQNPLLTYLNCARNTLTE-IDVSH 146
Query: 190 FSNLLQFNVSNNNLSGPVP 208
+ L + + N +
Sbjct: 147 NTQLTELDCHLNKKITKLD 165
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 8e-09
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 89 LDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNL 148
L V L L N +++ QLT L NK++ L +S+ L
Sbjct: 139 LTEIDVSHNTQLTELDCHLNKK--ITKLDVTPQTQLTTLDCSFNKIT-ELD--VSQNKLL 193
Query: 149 KRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
RL+ NN + DL++ L +N+L I + L F+ S N L+
Sbjct: 194 NRLNCDTNNITK--LDLNQNIQLTFLDCSSNKLT-EIDVTPLTQLTYFDCSVNPLT 246
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 9e-09
Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 12/132 (9%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
K + ++ D N++ + + + L L N + +++ QLT+ N
Sbjct: 191 KLLNRLNCDTNNITKL----DLNQNIQLTFLDCSSNKL---TEIDVTPLTQLTYFDCSVN 243
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSN 192
L+ L +S L+ L L + DL+ + L+ F AE + + +
Sbjct: 244 PLT-ELD--VSTLSKLTTLHCIQTDLLEI--DLTHNTQLIYFQAEGCRKIKELDVTHNTQ 298
Query: 193 LLQFNVSNNNLS 204
L + ++
Sbjct: 299 LYLLDCQAAGIT 310
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 5/121 (4%)
Query: 103 LSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSEL 162
+ T + LT L + ++ ++ + KL L +L ++NN ++
Sbjct: 23 EVAAAFEMQATDTISEEQLATLTSLDCHNSSIT-DMTG-IEKLTGLTKLICTSNNITT-- 78
Query: 163 PDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGN 222
DLS+ + L ++N+L + + L N N L+ N L + + N
Sbjct: 79 LDLSQNTNLTYLACDSNKLTN-LDVTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLNCARN 137
Query: 223 P 223
Sbjct: 138 T 138
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 21/116 (18%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 89 LDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNL 148
+ T + + +L L+ + N + + +++ +LT+L NKL+ +S+ L
Sbjct: 76 ITTLDLSQNTNLTYLACDSNKLT---NLDVTPLTKLTYLNCDTNKLT---KLDVSQNPLL 129
Query: 149 KRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
L+ + N + D+S + L N+ + + L + S N ++
Sbjct: 130 TYLNCARNTLTE--IDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKIT 183
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 4e-07
Identities = 21/126 (16%), Positives = 44/126 (34%), Gaps = 9/126 (7%)
Query: 80 LDGFNLSGILDTT-SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNL 138
L F+ S T V L L + ++ + ++++ QL + + L
Sbjct: 235 LTYFDCSVNPLTELDVSTLSKLTTLHCIQTDL---LEIDLTHNTQLIYFQAEGCRKIKEL 291
Query: 139 PDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNV 198
++ L LD + DLS+ L+ + N +L + + L +
Sbjct: 292 D--VTHNTQLYLLDCQAAGITEL--DLSQNPKLVYLYLNNTELT-ELDVSHNTKLKSLSC 346
Query: 199 SNNNLS 204
N ++
Sbjct: 347 VNAHIQ 352
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 1e-05
Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Query: 124 LTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRG 183
++ S +L L LD N++ + + + +++GL +N +
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MTGIEKLTGLTKLICTSNNIT- 77
Query: 184 GIPEFDFSNLLQFNVSNNNLS 204
+ +NL +N L+
Sbjct: 78 TLDLSQNTNLTYLACDSNKLT 98
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 7e-11
Identities = 64/291 (21%), Positives = 123/291 (42%), Gaps = 59/291 (20%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
E LG G+ G ++ + +AVK L+ S+S + F + ++H ++ A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAH 471
+++ ++ EY NGSL + L G L +AA +A+ +A + E H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAF----IEERNYIH 132
Query: 472 GNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSL---K------INDISNQM 520
+L++ NIL ++ + I+++GL ++ D + A+ + K IN
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINY----G 185
Query: 521 CSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575
TIK+DV+ FG++L E++T G++ + N EV +
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP------------------EVIQNL---- 223
Query: 576 AASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINNIKEEEER 619
RM++ L Q+ C + P +RP+ + + ++ + E
Sbjct: 224 -ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 9e-11
Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 13/131 (9%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
SL L+LE+ N+ ++ +S+ L L + ++ S +L LK L+IS+ +
Sbjct: 153 SLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 212
Query: 159 SSEL-PDLSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVNGRL 214
+ P+ L + + L +P +L L+F N+S N +S +
Sbjct: 213 LDTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPIS--------TI 263
Query: 215 GADSFSGNPGL 225
L
Sbjct: 264 EGSMLHELLRL 274
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 9e-09
Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 15/132 (11%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+L L +N I E ++ L L + N +S P + + L NL+ L + +N
Sbjct: 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92
Query: 159 SSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQ---FNVSNNNLSGPVPGVNGR 213
+P + +S L N++ + ++ F +L V +N+L
Sbjct: 93 KL-IPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDNDLV--------Y 142
Query: 214 LGADSFSGNPGL 225
+ +FSG L
Sbjct: 143 ISHRAFSGLNSL 154
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 13/131 (9%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+L L + +N++ + S L L + + L+ ++LS L+ L L + + N
Sbjct: 129 NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNI 188
Query: 159 SSELPD--LSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNNLSGPVPGVNGRL 214
++ + D R+ L + + NL ++++ NL+ +
Sbjct: 189 NA-IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT--------AV 239
Query: 215 GADSFSGNPGL 225
+ L
Sbjct: 240 PYLAVRHLVYL 250
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 1e-07
Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 10/137 (7%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L VL + T++ LT L + L+ ++ L L+ L++S N
Sbjct: 200 YRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP 259
Query: 158 FSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGV-- 210
S+ + L + L QL + + F L L+ NVS N L+ V
Sbjct: 260 IST-IEGSMLHELLRLQEIQLVGGQLA-VVEPYAFRGLNYLRVLNVSGNQLTTLEESVFH 317
Query: 211 -NGRLGADSFSGNPGLC 226
G L NP C
Sbjct: 318 SVGNLETLILDSNPLAC 334
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 9e-07
Identities = 21/134 (15%), Positives = 45/134 (33%), Gaps = 8/134 (5%)
Query: 76 RKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS 135
+ + + + + +L LS+ N+ + + L L + N +S
Sbjct: 203 KVLEISHWPYLDTMTPNC-LYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS 261
Query: 136 GNLPDSLSKLNNLKRLDISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFS-- 191
L +L L+ + + + + ++ L NQL + E F
Sbjct: 262 TIEGSMLHELLRLQEIQLVGGQLAV-VEPYAFRGLNYLRVLNVSGNQLT-TLEESVFHSV 319
Query: 192 -NLLQFNVSNNNLS 204
NL + +N L+
Sbjct: 320 GNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 6e-06
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+L L + EN I + + L L VG N L + S LN+L++L + N
Sbjct: 105 NLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNL 164
Query: 159 SSELPD--LSRISGLLTFFAENNQLRGGIPEFDFS---NLLQFNVSNNNL 203
+S +P LS + GL+ + + I ++ F L +S+
Sbjct: 165 TS-IPTEALSHLHGLIVLRLRHLNIN-AIRDYSFKRLYRLKVLEISHWPY 212
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 45/220 (20%), Positives = 72/220 (32%), Gaps = 58/220 (26%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLR----DWSISSEDFKNRMQKIDHVKHPNVLPP 406
+LG+G G + G AVK + E +Q + + HPN++
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 407 LAYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK----ALA 458
++ K LV E G LF+ + SE AA + + +
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE-----------VDAARIIRQVLSGIT 140
Query: 459 LIHEELREDGIAHGNLKSNNILFNNNMEPC---ISEYGLIVTENHDQSFLAQTSSLKIND 515
+H+ I H +LK N+L + + I ++GL +
Sbjct: 141 YMHKN----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM----------- 185
Query: 516 ISNQMCSTI--------------KADVYGFGVILLELLTG 541
T K DV+ GVIL LL+G
Sbjct: 186 --KDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 223
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+ + ++++ ++ + + L + N LS L+ L+ L++S+N
Sbjct: 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNV 69
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
E DL +S L T NN ++ + ++ + +NNN+S
Sbjct: 70 L-YETLDLESLSTLRTLDLNNNYVQ-ELLV--GPSIETLHAANNNIS 112
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 4/122 (3%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLS 143
+ + + +L L+L+ N I V ++ +L L + NKL+ +
Sbjct: 155 EIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQ 211
Query: 144 KLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQF-NVSNNN 202
+ + + NN L L F N G FS + V+
Sbjct: 212 SAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271
Query: 203 LS 204
+
Sbjct: 272 VK 273
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 8e-08
Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 13/110 (11%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L +L+L N + + ++ + L L + N + L +++ L +NNN
Sbjct: 58 TKLELLNLSSNVL--YETLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNN 110
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLS 204
S + SR G + NN++ + + D +Q+ ++ N +
Sbjct: 111 ISR-VS-CSRGQGKKNIYLANNKIT-MLRDLDEGCRSRVQYLDLKLNEID 157
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 3/89 (3%)
Query: 118 ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFA 176
N + V + L L N+K LD+S N S L+ + L
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 177 ENNQLRGGIPEF-DFSNLLQFNVSNNNLS 204
+N L + S L +++NN +
Sbjct: 66 SSNVLY-ETLDLESLSTLRTLDLNNNYVQ 93
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 7e-07
Identities = 18/117 (15%), Positives = 42/117 (35%), Gaps = 9/117 (7%)
Query: 92 TSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151
+ S+ L NNI+ S + ++Y+ NK++ + ++ L
Sbjct: 93 QELLVGPSIETLHAANNNIS---RVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYL 149
Query: 152 DISNNNFSSELPDLSRISGL--LTF-FAENNQLRGGIPEFDF-SNLLQFNVSNNNLS 204
D+ N + + + L + N + + + L ++S+N L+
Sbjct: 150 DLKLNEIDT-VNFAELAASSDTLEHLNLQYNFIY-DVKGQVVFAKLKTLDLSSNKLA 204
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 2e-10
Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+ + ++++ ++ + + L + N LS L+ L+ L++S+N
Sbjct: 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNV 69
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
E DL +S L T NN ++ + ++ + +NNN+S
Sbjct: 70 L-YETLDLESLSTLRTLDLNNNYVQ-ELLV--GPSIETLHAANNNIS 112
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 1e-09
Identities = 23/151 (15%), Positives = 42/151 (27%), Gaps = 4/151 (2%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLS 143
+ + + +L L+L+ N I + +L L + NKL+ +
Sbjct: 155 EIDTVNFAELAASSDTLEHLNLQYNFI--YDVKGQVVFAKLKTLDLSSNKLA-FMGPEFQ 211
Query: 144 KLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQF-NVSNNN 202
+ + + NN L L F N G FS + V+
Sbjct: 212 SAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271
Query: 203 LSGPVPGVNGRLGADSFSGNPGLCGKPLPNA 233
+ + C + LP
Sbjct: 272 VKKLTGQNEEECTVPTLGHYGAYCCEDLPAP 302
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 4e-07
Identities = 22/127 (17%), Positives = 48/127 (37%), Gaps = 23/127 (18%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK-----------------LSGNLPD 140
++ L L N ++ + +++ +L L + N L+ N
Sbjct: 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQ 93
Query: 141 SLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-N 197
L +++ L +NNN S + SR G + NN++ + + D +Q+ +
Sbjct: 94 ELLVGPSIETLHAANNNISR-VS-CSRGQGKKNIYLANNKIT-MLRDLDEGCRSRVQYLD 150
Query: 198 VSNNNLS 204
+ N +
Sbjct: 151 LKLNEID 157
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 4e-07
Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 3/89 (3%)
Query: 118 ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFA 176
N + V + L L N+K LD+S N S L+ + L
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 177 ENNQLRGGIPEF-DFSNLLQFNVSNNNLS 204
+N L + S L +++NN +
Sbjct: 66 SSNVLY-ETLDLESLSTLRTLDLNNNYVQ 93
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 20/116 (17%), Positives = 44/116 (37%), Gaps = 7/116 (6%)
Query: 92 TSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151
+ S+ L NNI+ S + ++Y+ NK++ + ++ L
Sbjct: 93 QELLVGPSIETLHAANNNIS---RVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYL 149
Query: 152 DISNNNFSS-ELPDLSRISGLLTF-FAENNQLRGGIPEFDF-SNLLQFNVSNNNLS 204
D+ N + +L+ S L + N + + + L ++S+N L+
Sbjct: 150 DLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVVFAKLKTLDLSSNKLA 204
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 48/294 (16%), Positives = 90/294 (30%), Gaps = 90/294 (30%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQK-ID---HVKHPNVLPP 406
LG+G + + D + A K + + + +M I + H +V+
Sbjct: 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 407 LAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRL--RVAAC----VAKALALI 460
++ +V E SL L L A + +
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELH--KRRK-------ALTEPEARYYLRQIVLGCQYL 157
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQM 520
H + H +LK N+ N ++E I ++GL +D + +
Sbjct: 158 HRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KV-----------L 201
Query: 521 CST---------------IKADVYGFGVILLELLTGKL-------------VQNNGFNLA 552
C T + DV+ G I+ LL GK ++ N +++
Sbjct: 202 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP 261
Query: 553 TWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
++ V LI +ML+ P RP++N++
Sbjct: 262 KHINPVAAS----------LIQ------KMLQT----------DPTARPTINEL 289
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 2e-10
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Query: 88 ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNN 147
+ D +S+ + L LSLE N I + + + QL LY+G NK++ LS+L
Sbjct: 102 VKDLSSLKDLKKLKSLSLEHNGI--SDINGLVHLPQLESLYLGNNKITD--ITVLSRLTK 157
Query: 148 LKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
L L + +N S + L+ ++ L + N + NL + +
Sbjct: 158 LDTLSLEDNQISD-IVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECL 213
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 7/118 (5%)
Query: 88 ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNN 147
+ D + + S+ + ++I Q I +T L++ NKL+ ++ L+ L N
Sbjct: 36 VTDAVTQNELNSIDQIIANNSDI--KSVQGIQYLPNVTKLFLNGNKLT-DIKP-LANLKN 91
Query: 148 LKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFD-FSNLLQFNVSNNNLS 204
L L + N L L + L + E+N + I L + NN ++
Sbjct: 92 LGWLFLDENKVKD-LSSLKDLKKLKSLSLEHNGIS-DINGLVHLPQLESLYLGNNKIT 147
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 4e-05
Identities = 11/87 (12%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 118 ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAE 177
+ + + ++ + ++LN++ ++ +N++ S + + + + F
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQGIQYLPNVTKLFLN 76
Query: 178 NNQLRGGIPEFDFSNLLQFNVSNNNLS 204
N+L P + NL + N +
Sbjct: 77 GNKLTDIKPLANLKNLGWLFLDENKVK 103
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 7e-05
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 80 LDGFNLSG--ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN 137
L+ L I D T + + L LSLE+N I + ++ +L +LY+ +N +S +
Sbjct: 136 LESLYLGNNKITDITVLSRLTKLDTLSLEDNQI--SDIVPLAGLTKLQNLYLSKNHIS-D 192
Query: 138 LPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQF 196
L +L+ L NL L++ + ++ + S + T + L + S+ +
Sbjct: 193 L-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL---VTPEIISDDGDY 248
Query: 197 NVSNNNLSGP 206
N P
Sbjct: 249 EKPNVKWHLP 258
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 2e-10
Identities = 59/305 (19%), Positives = 103/305 (33%), Gaps = 82/305 (26%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNR----MQKIDHVKHPNVLPPL 407
++LG G G++ G +AVKR+ I D + + D HPNV +
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRM---LIDFCDIALMEIKLLTESDD--HPNV---I 72
Query: 408 AYYCSKQEKLLVY---EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAK----ALALI 460
YYCS+ +Y E N +L +L+ + + + +A +
Sbjct: 73 RYYCSETTDRFLYIALEL-CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPC-------------ISEYGLIVTENHDQSFLAQ 507
H I H +LK NIL + + IS++GL + QS
Sbjct: 132 HSL----KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 508 TSS--------------LKINDISNQMCSTIKADVYGFGVILLELLTG------------ 541
+ + N++ + T D++ G + +L+
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 542 KLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERP 601
+ F+L + D LIAEA L+ + I+ P +RP
Sbjct: 248 SNIIRGIFSLD-------EMKCL---HDRSLIAEATD------LIS---QMIDHDPLKRP 288
Query: 602 SMNQV 606
+ +V
Sbjct: 289 TAMKV 293
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 3e-10
Identities = 36/210 (17%), Positives = 80/210 (38%), Gaps = 39/210 (18%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
+GRG G ++R+ G AVK+ + E F+ ++++ + P ++P
Sbjct: 64 PRVGRGSFGEVHRMKDKQTGFQCAVKK-----VRLEVFR--VEELVACAGLSSPRIVP-- 114
Query: 408 AYY--CSKQEKLLVY-EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
Y + + ++ E GSL L+ + L + L +H
Sbjct: 115 -LYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR- 169
Query: 465 REDGIAHGNLKSNNILFNNNMEPC-ISEYGL--IVTENHDQSFLAQTSSLK--------- 512
I HG++K++N+L +++ + ++G + + L +
Sbjct: 170 ---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 226
Query: 513 INDISNQMCSTIKADVYGFGVILLELLTGK 542
+ + + C K D++ ++L +L G
Sbjct: 227 V--VMGKPCDA-KVDIWSSCCMMLHMLNGC 253
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 3e-10
Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 58/207 (28%)
Query: 352 ELLGRGKHGSLYR---VVLDDGLMLAVKRLRDWSISSEDFKNRM----QKIDHVKHPNVL 404
G ++ LD +A+ + + +D ++ + P V
Sbjct: 37 IFHGGVPPLQFWQALDTALDR--QVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVA 94
Query: 405 P--------PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKA 456
+V E+ GSL + S +R +A A
Sbjct: 95 RVLDVVHTRAGGL--------VVAEWIRGGSLQEVADTSP-----SPVGAIRAMQSLAAA 141
Query: 457 LALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDI 516
H G+A + + +S G +V ++ A
Sbjct: 142 ADAAHRA----GVALSIDHPSRVR--------VSIDGDVVL-----AYPATMPD------ 178
Query: 517 SNQMCSTIKADVYGFGVILLELLTGKL 543
+ + D+ G G L LL +
Sbjct: 179 -----ANPQDDIRGIGASLYALLVNRW 200
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 45/219 (20%), Positives = 75/219 (34%), Gaps = 57/219 (26%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
+LG+G G + + AVK + S ++D +++++ + HPN++
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 408 AYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK----ALAL 459
+V E G LF+ + SE AA + K +
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-----------HDAARIIKQVFSGITY 136
Query: 460 IHEELREDGIAHGNLKSNNILFNNNMEPC---ISEYGLIVTENHDQSFLAQTSSLKINDI 516
+H+ I H +LK NIL + + C I ++GL +
Sbjct: 137 MHKH----NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM------------ 180
Query: 517 SNQMCSTI--------------KADVYGFGVILLELLTG 541
T K DV+ GVIL LL+G
Sbjct: 181 -KDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSG 218
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 3e-10
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 21/120 (17%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLN------------ 146
L L + N + ++ +L+ L LP L KL
Sbjct: 82 ELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLP-ALPSGLCKLWIFGNQLTSLPVL 139
Query: 147 --NLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
L+ L +S+N +S LP L S L +A NNQL +P S L + +VS+N L+
Sbjct: 140 PPGLQELSVSDNQLAS-LPAL--PSELCKLWAYNNQLT-SLPM-LPSGLQELSVSDNQLA 194
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 1e-09
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 14/127 (11%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
L L N + ++ S L L V N+L+ +LP S LK L +S N
Sbjct: 202 ELYKLWAYNNRLT-SLPALPSG---LKELIVSGNRLT-SLPVLPS---ELKELMVSGNRL 253
Query: 159 SSELPDLSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNNLSGPVPGVNGRLGA 216
+S LP L SGLL+ NQL +PE S+ N+ N LS + +
Sbjct: 254 TS-LPML--PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITS 309
Query: 217 DSFSGNP 223
P
Sbjct: 310 APGYSGP 316
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 2e-08
Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 13/107 (12%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+ L + +NN+ ++ L L V N+L+ +LP L L +
Sbjct: 61 AHITTLVIPDNNLT-SLPALPPE---LRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTH 115
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
+ L ++ NQL +P L + +VS+N L+
Sbjct: 116 LPALPSGLCKLW------IFGNQLT-SLPV-LPPGLQELSVSDNQLA 154
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 8e-08
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 14/111 (12%)
Query: 95 CKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDIS 154
C VL++ E+ + T+ + +T L + N L+ +LP L+ L++S
Sbjct: 37 CLNNGNAVLNVGESGLT-TLPDCL--PAHITTLVIPDNNLT-SLPALPP---ELRTLEVS 89
Query: 155 NNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
N +S LP + L F L S L + + N L+
Sbjct: 90 GNQLTS-LPVLPPGLLELSIFSNPLTHLPALP-----SGLCKLWIFGNQLT 134
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 1e-07
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
L LS+ +N +A ++ S L L+ N+L+ +LP S L+ L +S+N
Sbjct: 142 GLQELSVSDNQLA-SLPALPSE---LCKLWAYNNQLT-SLPMLPS---GLQELSVSDNQL 193
Query: 159 SSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
+S LP L S L +A NN+L +P S L + VS N L+
Sbjct: 194 AS-LPTL--PSELYKLWAYNNRLT-SLPAL-PSGLKELIVSGNRLT 234
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 5e-07
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 11/104 (10%)
Query: 105 LEENNIAGTVSQEISNC--KQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSEL 162
EE+ V Q++ C L VG + L+ LPD L ++ L I +NN +S L
Sbjct: 21 AEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCL--PAHITTLVIPDNNLTS-L 76
Query: 163 PDLSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNNLS 204
P L L T NQL +P L F+ +L
Sbjct: 77 PAL--PPELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLP 117
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 7e-07
Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 8/119 (6%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
L L + N + ++ S L L V RN+L+ LP+SL L++ +++ N
Sbjct: 242 ELKELMVSGNRLT-SLPMLPSG---LLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPL 296
Query: 159 SSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQF--NVSNNNLSGPVPGVNGRLG 215
SE + +R + + + + L G
Sbjct: 297 -SERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPAD 354
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 3e-10
Identities = 44/309 (14%), Positives = 101/309 (32%), Gaps = 57/309 (18%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
++LG+G +++R G + A+K + S +M++ + + H N++
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 408 AYY--CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
A + + K+L+ E+ P GSL+ +L N L V V + + E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-- 131
Query: 466 EDGIAHGNLKSNNILFNNNMEPC----ISEYGL--IVTENHDQSFLAQTS---------- 509
GI H N+K NI+ + ++++G + ++ +
Sbjct: 132 --GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----QFVSLYGTEEYLHPD 185
Query: 510 --SLKINDISNQMCSTIKADVYGFGVILLELLTGKL---VQNNGFNLATWVHSVVRE--- 561
+ +Q D++ GV TG L ++ ++
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245
Query: 562 --------------EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVA 607
+W+ ++ ++ + +L + + +Q
Sbjct: 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVL-LTPVLA---NILEADQEKCWGFDQFF 301
Query: 608 VMINNIKEE 616
++I
Sbjct: 302 AETSDILHR 310
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 3e-10
Identities = 49/294 (16%), Positives = 90/294 (30%), Gaps = 90/294 (30%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQK-ID---HVKHPNVLPP 406
LG+G + + D + A K + + + +M I + H +V+
Sbjct: 21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 407 LAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLR--VAAC----VAKALALI 460
++ +V E SL L L A + +
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLELH--KRRK-------ALTEPEARYYLRQIVLGCQYL 131
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQM 520
H + H +LK N+ N ++E I ++GL +D + +
Sbjct: 132 HRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KV-----------L 175
Query: 521 CST---------------IKADVYGFGVILLELLTGKL-------------VQNNGFNLA 552
C T + DV+ G I+ LL GK ++ N +++
Sbjct: 176 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP 235
Query: 553 TWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
++ V LI K+LQ P RP++N++
Sbjct: 236 KHINPVAAS----------LIQ---------KMLQT-------DPTARPTINEL 263
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 3e-10
Identities = 54/317 (17%), Positives = 110/317 (34%), Gaps = 60/317 (18%)
Query: 323 SGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDW 381
+ S V + ++ +L+ +L G +Y + G A+KRL
Sbjct: 10 ASGRDQSDFVGQTVELGELRLRVR-----RVLAEGGFAFVYEAQDVGSGREYALKRLL-- 62
Query: 382 SISSEDFKNRMQKIDHVK----HPNVLPPLAYYCS----------KQEKLLVYEYQPNGS 427
S E + +Q++ +K HPN++ + + Q + L+ G
Sbjct: 63 SNEEEKNRAIIQEVCFMKKLSGHPNIVQ---FCSAASIGKEESDTGQAEFLLLTELCKGQ 119
Query: 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEP 487
L L E+ + L++ +A+ +H ++ I H +LK N+L +N
Sbjct: 120 LVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR--QKPPIIHRDLKVENLLLSNQGTI 177
Query: 488 CISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTI------------------KADVY 529
+ ++G T +H + + + +T K D++
Sbjct: 178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIW 237
Query: 530 GFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVA 589
G IL L + +G L +V ++++ D L++
Sbjct: 238 ALGCILYLLCFRQHPFEDGAKLR-----IVNGKYSIPPHDTQ-------YTVFHSLIR-- 283
Query: 590 LRCINQSPNERPSMNQV 606
+ +P ER S+ +V
Sbjct: 284 -AMLQVNPEERLSIAEV 299
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 5e-10
Identities = 49/302 (16%), Positives = 109/302 (36%), Gaps = 74/302 (24%)
Query: 352 ELLGRGKHGSLYRVVLDDG-----LMLAVKRLRDWSI--SSEDF---KNRMQKIDHVKHP 401
++LG G G++Y+ + + +A+K LR+ + ++++ M +D+ P
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN---P 77
Query: 402 NVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIH 461
+V L C L+ + P G L + + E+ + L +AK +
Sbjct: 78 HVCRLLGI-CLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY-- 132
Query: 462 EELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLK------- 512
L + + H +L + N+L I+++GL ++ + K
Sbjct: 133 --LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMA 187
Query: 513 ---INDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWT 564
I T ++DV+ +GV + EL+T G + +
Sbjct: 188 LESILH--RIY--THQSDVWSYGVTVWELMTFGSKPYDGIPAS----------------- 226
Query: 565 VEVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617
E+ + ER+ + + + +C + RP ++ + + + +
Sbjct: 227 -EISSIL-----EKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280
Query: 618 ER 619
+R
Sbjct: 281 QR 282
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 7e-10
Identities = 48/287 (16%), Positives = 102/287 (35%), Gaps = 51/287 (17%)
Query: 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSE--DFKNR---MQKIDHVKHPNVLP 405
E +GRG G ++ L D ++AVK R+ F +++ H PN++
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH---PNIVR 176
Query: 406 PLAYYCSKQE-KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
+ C++++ +V E G L G + L++ A + + +
Sbjct: 177 LIGV-CTQKQPIYIVMELVQGGDFLTFLR--TEGARLRVKTLLQMVGDAAAGMEYLESK- 232
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDIS------- 517
H +L + N L IS++G+ E D + A ++ +
Sbjct: 233 ---CCIHRDLAARNCLVTEKNVLKISDFGM-SREEADGVYAASGGLRQVP-VKWTAPEAL 287
Query: 518 NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577
N + ++DV+ FG++L E + + + + V
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------------QTREFV-----E 329
Query: 578 SEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617
R+ + ++ +C P +RPS + + + +I++
Sbjct: 330 KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 7e-10
Identities = 58/302 (19%), Positives = 118/302 (39%), Gaps = 83/302 (27%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
+ LG G+ G + +AVK +++ S+S ++F Q + + HP ++ C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYG-VC 72
Query: 412 SKQE-KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470
SK+ +V EY NG L N L +G+ + L + V + +A L
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLR--SHGKGLEPSQLLEMCYDVCEGMAF----LESHQFI 126
Query: 471 HGNLKSNNILFNNNMEPCISEYGL--IVTEN--------------------HDQSFLAQT 508
H +L + N L + ++ +S++G+ V ++ H +
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKY---- 182
Query: 509 SSLKINDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEW 563
+ K+DV+ FG+++ E+ + GK+ N+
Sbjct: 183 --------------SSKSDVWAFGILMWEVFSLGKMPYDLYTNS---------------- 212
Query: 564 TVEVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINNIKEE 616
EV +V + R+ + + Q+ C ++ P +RP+ Q+ I ++E+
Sbjct: 213 --EVVLKV-----SQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265
Query: 617 EE 618
++
Sbjct: 266 DK 267
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 9e-10
Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 7/113 (6%)
Query: 98 QSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156
+ L L + +N+ + + + L +L + + L++L+ L ++ N
Sbjct: 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 455
Query: 157 NFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQ---FNVSNNNLS 204
+F + + L QL + F++L N+++N L
Sbjct: 456 SFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMASNQLK 507
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 1e-09
Identities = 26/138 (18%), Positives = 53/138 (38%), Gaps = 8/138 (5%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
+ + + NL + + + ++L+ L + + + + L L + N
Sbjct: 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 455
Query: 133 KLSGNL-PDSLSKLNNLKRLDISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEFD 189
N PD ++L NL LD+S L + +S L +NQL+ +P+
Sbjct: 456 SFQENFLPDIFTELRNLTFLDLSQCQLEQ-LSPTAFNSLSSLQVLNMASNQLK-SVPDGI 513
Query: 190 F---SNLLQFNVSNNNLS 204
F ++L + + N
Sbjct: 514 FDRLTSLQKIWLHTNPWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 10/122 (8%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L L L N I S L L L+ + L LK L++++N
Sbjct: 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 135
Query: 158 FSS--ELPDLSRISGLLTFFAENNQLRGGIPEFDFSNL-------LQFNVSNNNLSGPVP 208
S S ++ L +N+++ I D L L ++S N ++ P
Sbjct: 136 IQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQP 194
Query: 209 GV 210
G
Sbjct: 195 GA 196
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 4e-08
Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 16/169 (9%)
Query: 57 DPCSGKWVGVT--CDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSL 105
+PC +T C S + + L L + S L VL L
Sbjct: 1 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSY-SFFSFPELQVLDL 59
Query: 106 EENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD- 164
I + L+ L + N + + S L++L++L N +S
Sbjct: 60 SRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFP 119
Query: 165 LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGV 210
+ + L +N ++ FSNL L+ ++S+N +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 4e-07
Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 96 KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS--GNLPDSLSKLNNLKRLDI 153
K +SL L+ N + + L L + RN LS G S +LK LD+
Sbjct: 323 KLKSLKRLTFTSNKG--GNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDL 380
Query: 154 SNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDF----SNLLQFNVSNNNLSGPVPG 209
S N + + + L +++ L+ + EF NL+ ++S+ +
Sbjct: 381 SFNGVITMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRV---- 435
Query: 210 VNGRLGADSFSGNPGL 225
F+G L
Sbjct: 436 ----AFNGIFNGLSSL 447
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 6e-06
Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 14/144 (9%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLT----HLY 128
K+++++ + + +L L L N I ++ Q+ L
Sbjct: 124 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLD 183
Query: 129 VGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD--LSRISGL------LTFFAENNQ 180
+ N ++ + K L +L + NN S + + ++GL L F
Sbjct: 184 LSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN 242
Query: 181 LRGGIPEFDFSNLLQFNVSNNNLS 204
L + L + L+
Sbjct: 243 LE-KFDKSALEGLCNLTIEEFRLA 265
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 5/121 (4%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGR 131
S+ + + G + + ++L L L + + +S ++ L L +
Sbjct: 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMAS 503
Query: 132 NKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFS 191
N+L +L +L+++ + N + RI L + +N+Q G + S
Sbjct: 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDC---SCPRIDYLSRWLNKNSQKEQGSAKCSGS 560
Query: 192 N 192
Sbjct: 561 G 561
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 1e-09
Identities = 43/299 (14%), Positives = 98/299 (32%), Gaps = 57/299 (19%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
++LG+G +++R G + A+K + S +M++ + + H N++
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 408 AYY--CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
A + + K+L+ E+ P GSL+ +L N L V V + + E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-- 131
Query: 466 EDGIAHGNLKSNNILFNNNMEPC----ISEYGL--IVTENHDQSFLAQTS---------- 509
GI H N+K NI+ + ++++G + ++ +
Sbjct: 132 --GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----QFVSLYGTEEYLHPD 185
Query: 510 --SLKINDISNQMCSTIKADVYGFGVILLELLTGKL---VQNNGFNLATWVHSVVRE--- 561
+ +Q D++ GV TG L ++ ++
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245
Query: 562 --------------EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
+W+ ++ ++ + +L + + +Q
Sbjct: 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVL-LTPVLA---NILEADQEKCWGFDQF 300
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 2e-09
Identities = 49/300 (16%), Positives = 89/300 (29%), Gaps = 87/300 (29%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLR--------------DWSISSEDFKNRMQKID 396
LG G +G + + A+K ++ + E+ N + +
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 397 HVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAAC 452
+ HPN++ + K+ LV E+ G LF + E AA
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDE-----------CDAAN 150
Query: 453 VAK----ALALIHEELREDGIAHGNLKSNNILFNNNMEPC---ISEYGLIVTENHDQSFL 505
+ K + +H+ I H ++K NIL N I ++GL + D
Sbjct: 151 IMKQILSGICYLHKH----NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL- 205
Query: 506 AQTSSLKINDISNQMCSTI--------------KADVYGFGVILLELLTGKLVQNNGFNL 551
T K DV+ GVI+ LL G F
Sbjct: 206 ------------RDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYP----PFGG 249
Query: 552 ATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL-----QVALRCINQSPNERPSMNQV 606
++ +V + + K + ++ + N+R + +
Sbjct: 250 QN----------DQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEA 299
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 2e-09
Identities = 82/585 (14%), Positives = 174/585 (29%), Gaps = 177/585 (30%)
Query: 13 VFLLFPVVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGW------NRSSDPCSGKWVGV 66
LF + S+ EE V++ F+E+ N+ + P + +
Sbjct: 64 TLRLFWTLLSKQEEMVQK----FVEE------VLRINYKFLMSPIKTEQRQPSMMTRMYI 113
Query: 67 TCD---------------SRQKSVRK-------------IVLDGFNLSG--ILDTTSVCK 96
SR + K +++DG SG + VC
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV-ALDVCL 172
Query: 97 TQSLVV--------LSLEENNIAGTVSQEISN-CKQLTHLYVGRNKLSGNLPDSLSKLNN 147
+ + L+L+ N TV + + Q+ + R+ S N+ + +
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 148 -LKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFS-NLLQFNVSNNNLSG 205
L+RL + + + + L L + N + F+ S +L ++
Sbjct: 233 ELRRL-LKSKPYENCLLVLLNVQ--------NAKA---WNAFNLSCKIL---LTTRFKQ- 276
Query: 206 PVPGVNGRLGADSFSGNPGLCGKPLPNACPPTPPPIKE-SKGSSTNQVFLFSGYILLGLF 264
V D S T + S + ++ + L
Sbjct: 277 -V--------TDFLSAA------------TTTHISLDHHSMTLTPDE--------VKSLL 307
Query: 265 ILLLVVLKLVSKNKQKEEKTDVIKKEVALDINSNKRSSISSVHRAGDNRSEY----SITS 320
+ L + + + +E L N + S I+ R G + +
Sbjct: 308 LKYL------------DCRPQDLPRE-VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354
Query: 321 VDSGAASSSLVVLTSSKVNKLKFEDL------LRAPAELLGRGKHGSLYRVVLDDGLMLA 374
+ + SSL VL ++ K+ F+ L P LL ++ V+ +M+
Sbjct: 355 LTT-IIESSLNVLEPAEYRKM-FDRLSVFPPSAHIPTILLSL-----IWFDVIKSDVMVV 407
Query: 375 VKRLRDWSISSEDFKNRM-----------QKIDHVK--HPNVL----PPLAYYCSKQEKL 417
V +L +S+ + K K+++ H +++ P +
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP 467
Query: 418 LVYEYQPNGSLFNLL--H--GSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGN 473
+ +Y ++ + H E+ + + + + +++R D A
Sbjct: 468 YLDQY-----FYSHIGHHLKNIEHPERMTLFRMVFL------DFRFLEQKIRHDSTAWNA 516
Query: 474 LKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISN 518
S + Y + +N +N I +
Sbjct: 517 SGSILNTLQQ-----LKFYKPYICDNDP------KYERLVNAILD 550
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 5e-07
Identities = 65/412 (15%), Positives = 138/412 (33%), Gaps = 118/412 (28%)
Query: 263 LFILLLVVLKLVSKNKQKEEKTDVIKK--EVALDINSN-KRSSISSVHRAGDNRSEYSIT 319
LF LL +KQ+E +++K E L IN S I + R + I
Sbjct: 67 LFWTLL--------SKQEE----MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE 114
Query: 320 SVDSGAASSSLV----VLTSSKVNKLKFEDLLRA-PAE------LLGRGKHGSLYRVVLD 368
D + + V KL+ + LL PA+ +LG GK + V
Sbjct: 115 QRDRLYNDNQVFAKYNVSRLQPYLKLR-QALLELRPAKNVLIDGVLGSGKT-WVALDVCL 172
Query: 369 DGLMLAVKRLRD----W-SI----SSEDFKNRMQKIDHVKHPNVL--------PPLAYYC 411
V+ D W ++ S E +QK+ + PN L +
Sbjct: 173 S---YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229
Query: 412 SKQEK--LLVYEYQPNGSLFNLLH--GSENGQSFDWGSRLRVAACVAKALALIHEELRED 467
+ E LL + N L LL+ ++ +F+ ++ + R
Sbjct: 230 IQAELRRLLKSKPYEN-CLLVLLNVQNAKAWNAFNLSCKILLTT-------------RFK 275
Query: 468 GIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKAD 527
+ + + + + + +T + +S L + + D+ ++ +T
Sbjct: 276 QVT------DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP-- 327
Query: 528 VYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQ 587
L ++ + +++ LATW + W + + +++ +++
Sbjct: 328 ------RRLSII-AESIRD---GLATW------DNW-----------KHVNCDKLTTIIE 360
Query: 588 VALRCINQSPNE-RPSMNQVAVM-----I---------NNIKEEEERSISSE 624
+L P E R ++++V I ++ + + + ++
Sbjct: 361 SSLN--VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 2e-09
Identities = 29/111 (26%), Positives = 38/111 (34%), Gaps = 6/111 (5%)
Query: 99 SLVVLSLEENNIAGTV---SQEISNCKQLTHLYVGRNKLS--GNLPDSLSKLNNLKRLDI 153
SL L L EN + S L L + +N L + L L NL LDI
Sbjct: 335 SLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDI 394
Query: 154 SNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
S N F + + +R + L +VSNNNL
Sbjct: 395 SRNTFHPMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDVSNNNLD 444
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 8e-09
Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 13/132 (9%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
++ L L N I ++ C L L + ++++ D+ L +L+ LD+S+N+
Sbjct: 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86
Query: 159 SSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVNGR 213
SS L +S L N + F NL LQ + N +
Sbjct: 87 SS-LSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIR----- 140
Query: 214 LGADSFSGNPGL 225
F+G L
Sbjct: 141 --RIDFAGLTSL 150
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 2e-08
Identities = 34/161 (21%), Positives = 60/161 (37%), Gaps = 25/161 (15%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQ--SLVVLSLEENNIA--GTVSQEISNCKQLTHLY 128
KS+ + L + S CK SL L L +N++ + + K LT L
Sbjct: 334 KSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLD 393
Query: 129 VGRNKLSGNLPDSLSKLNNLKRLDISNNNFSS---------ELPDLS---------RISG 170
+ RN +PDS ++ L++S+ E+ D+S +
Sbjct: 394 ISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPR 452
Query: 171 LLTFFAENNQLRGGIPEFDFSNLLQF-NVSNNNLSGPVPGV 210
L + N+L+ +P+ +L +S N L G+
Sbjct: 453 LQELYISRNKLKT-LPDASLFPVLLVMKISRNQLKSVPDGI 492
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 16/132 (12%), Positives = 50/132 (37%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
+++ + + + SL L ++ ++ SQ + + + + HL + +
Sbjct: 123 TNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLS 182
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSN 192
+ + L L++++ L++ + N + + + + + + + F+
Sbjct: 183 ESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNE 242
Query: 193 LLQFNVSNNNLS 204
LL+ LS
Sbjct: 243 LLKLLRYILELS 254
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 10/131 (7%)
Query: 83 FNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSL 142
+ S ++ +T ++ L + + + +S S +++ + V +K+
Sbjct: 271 PSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFS 330
Query: 143 SKLNNLKRLDISNNNFSSELPDLSRISGLL----TFFAENNQLRGGIPEFDF-----SNL 193
L +L+ LD+S N E S G T N LR + + NL
Sbjct: 331 QHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLR-SMQKTGEILLTLKNL 389
Query: 194 LQFNVSNNNLS 204
++S N
Sbjct: 390 TSLDISRNTFH 400
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 3e-05
Identities = 15/127 (11%), Positives = 36/127 (28%), Gaps = 3/127 (2%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQE-ISNCKQLTHLYVGR 131
S++ + L G + T+ +L L + + + + L L +
Sbjct: 98 SSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKA 157
Query: 132 NKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDF 190
L SL + ++ L + + + L +S + + L
Sbjct: 158 LSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLA-RFQFSPL 216
Query: 191 SNLLQFN 197
+
Sbjct: 217 PVDEVSS 223
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
L L + N + + S L + + RN+L +L +L+++ + N +
Sbjct: 452 RLQELYISRNKL--KTLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 4e-04
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 84 NLSG-ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSL 142
NLS + C Q+L VL + NN+ + S + L LY+ RNKL LPD+
Sbjct: 416 NLSSTGIRVVKTCIPQTLEVLDVSNNNLD-SFSLFLPR---LQELYISRNKLK-TLPDA- 469
Query: 143 SKLNNLKRLDISNNNFSSELPD--LSRISGLLTFFAENNQL 181
S L + IS N S +PD R++ L + N
Sbjct: 470 SLFPVLLVMKISRNQLKS-VPDGIFDRLTSLQKIWLHTNPW 509
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 4e-09
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 54/220 (24%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
+LG+G +G +Y L + + +A+K + + S + ++I H+KH N++
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPE--RDSRYSQPLHEEIALHKHLKHKNIV--- 82
Query: 408 AYY--CSKQEKLLVY-EYQPNGSLFNLLHGSENGQSFDWGSRLRV-AACVAKALALIHEE 463
Y S+ + ++ E P GSL LL S+ G D + + + L +H+
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 464 LREDGIAHGNLKSNNILFNNNMEPC-ISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS 522
I H ++K +N+L N IS++G S ++ I+ +
Sbjct: 142 ----QIVHRDIKGDNVLINTYSGVLKISDFGT---------------SKRLAGINPCTET 182
Query: 523 --------------------TIKADVYGFGVILLELLTGK 542
AD++ G ++E+ TGK
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 4e-09
Identities = 56/281 (19%), Positives = 118/281 (41%), Gaps = 47/281 (16%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
+ +G G+ G ++ + +A+K +R+ ++S EDF + + + HP ++ C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG-VC 72
Query: 412 SKQE-KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470
+Q LV E+ +G L + L F + L + V + +A L E +
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAY----LEEACVI 126
Query: 471 HGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN----DISNQMCSTIKA 526
H +L + N L N +S++G+ DQ + + + ++ + + K+
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 527 DVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581
DV+ FGV++ E+ + GK+ N+ EV +++ ++ R
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNS------------------EVVEDI-----STGFR 223
Query: 582 MLK-------LLQVALRCINQSPNERPSMNQVAVMINNIKE 615
+ K + Q+ C + P +RP+ +++ + I E
Sbjct: 224 LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 5e-09
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L +L L+ NN+ T + + N L + + N+L + K+ L+RL ISNN
Sbjct: 226 VELTILKLQHNNL--TDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNR 283
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNNLS 204
+ I L +N L + F L + +N++
Sbjct: 284 LVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 331
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 7e-08
Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 20/125 (16%)
Query: 98 QSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156
L VL LE N+++ ++ + I N +LT L + N L D+ +L+ L +S+N
Sbjct: 117 PLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 175
Query: 157 NFSS-----------------ELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVS 199
+ L L+ + A +N + + L +
Sbjct: 176 RLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSIN-VVRGPVNVELTILKLQ 234
Query: 200 NNNLS 204
+NNL+
Sbjct: 235 HNNLT 239
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 8e-08
Identities = 20/116 (17%), Positives = 41/116 (35%), Gaps = 4/116 (3%)
Query: 89 LDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNL 148
+ K Q L L + N + ++ L L + N L ++ + + + L
Sbjct: 263 IMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRL 320
Query: 149 KRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
+ L + +N+ + L LS L +N F N+ + V + +
Sbjct: 321 ENLYLDHNSIVT-LK-LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQH 374
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 25/145 (17%), Positives = 49/145 (33%), Gaps = 28/145 (19%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK----------------LSGNLPDS 141
L LS+ NN+ L +L + N+ +S NL +
Sbjct: 141 PKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLST 200
Query: 142 LSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSN 200
L+ ++ LD S+N+ + + L ++N L ++ L++ ++S
Sbjct: 201 LAIPIAVEELDASHNSINV-VRGPV-NVELTILKLQHNNLT-DTAWLLNYPGLVEVDLSY 257
Query: 201 NNLSGPVPGVNGRLGADSFSGNPGL 225
N L ++ F L
Sbjct: 258 NELE--------KIMYHPFVKMQRL 274
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 6e-06
Identities = 17/128 (13%), Positives = 38/128 (29%), Gaps = 15/128 (11%)
Query: 103 LSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSEL 162
+ ++ E + + + L ++ L++++ E+
Sbjct: 26 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI-EEI 84
Query: 163 PD--LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVNGRLGAD 217
+ + + N +R +P F N+ L + N+LS L
Sbjct: 85 DTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS--------SLPRG 135
Query: 218 SFSGNPGL 225
F P L
Sbjct: 136 IFHNTPKL 143
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 58.1 bits (140), Expect = 6e-09
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 95 CKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDIS 154
C L L N++ ++ + Q+T L + +N L +LP+ + +L+ LD
Sbjct: 56 CLINQFSELQLNRLNLS-SLPDNL--PPQITVLEITQNALI-SLPELPA---SLEYLDAC 108
Query: 155 NNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
+N S+ LP+L + L +NNQL +PE + L N NN L+
Sbjct: 109 DNRLST-LPEL--PASLKHLDVDNNQLT-MLPE-LPALLEYINADNNQLT 153
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 54.6 bits (131), Expect = 7e-08
Identities = 12/116 (10%), Positives = 37/116 (31%), Gaps = 7/116 (6%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLT----HLYVGRNKLSGNLPDSLSKLNNLKRLDI 153
+SL L + N + ++ N+++ ++P+++ L+ + +
Sbjct: 180 ESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIIL 237
Query: 154 SNNNFSSEL-PDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208
+N SS + LS+ + + + + + +
Sbjct: 238 EDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQ 293
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 52.7 bits (126), Expect = 2e-07
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 17/133 (12%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L ++ + N + + + ++ L L V N+L+ LP+ +L+ LD+S N
Sbjct: 140 ALLEYINADNNQL-TMLPELPTS---LEVLSVRNNQLTF-LPELPE---SLEALDVSTNL 191
Query: 158 FSSELPD-----LSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNNLSGPVPGV 210
S LP + F N++ IPE + +N LS +
Sbjct: 192 LES-LPAVPVRNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRES 249
Query: 211 NGRLGADSFSGNP 223
+ A P
Sbjct: 250 LSQQTAQPDYHGP 262
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 4e-07
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 18/112 (16%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
SL L ++ N + + + + L ++ N+L+ LP+ + +L+ L + NN
Sbjct: 121 SLKHLDVDNNQLT-MLPELPAL---LEYINADNNQLT-MLPELPT---SLEVLSVRNNQL 172
Query: 159 SSELPDLSRISGLLTFFAENNQLRGGIPEFDFSN------LLQFNVSNNNLS 204
+ LP+L L N L +P N + F N ++
Sbjct: 173 -TFLPEL--PESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT 220
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 2e-04
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 9/105 (8%)
Query: 103 LSLEENNIAGTVSQEISNCKQLTHLYV---GRNKLSGNLPDSLSKLNNLKRLDISNNNFS 159
+ N I+GT + S + + RN+ L + L +N L ++ N S
Sbjct: 15 QNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECL--INQFSELQLNRLNLS 72
Query: 160 SELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
S LPD + + N L +PE ++L + +N LS
Sbjct: 73 S-LPD-NLPPQITVLEITQNALI-SLPE-LPASLEYLDACDNRLS 113
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 7e-09
Identities = 33/222 (14%), Positives = 70/222 (31%), Gaps = 42/222 (18%)
Query: 354 LGRGKHGSLYRV----------VLDDGLMLAVKRLRDWSISSEDFKNRMQKID------- 396
L +GK + + L+ + + K++
Sbjct: 39 LNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIIT 98
Query: 397 HVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLL------HGSENGQSFDWGSRLRVA 450
+K+ L + E ++YEY N S+ + + +
Sbjct: 99 DIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIK-CII 157
Query: 451 ACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTS- 509
V + + IH E I H ++K +NIL + N +S++G + + S
Sbjct: 158 KSVLNSFSYIHNEK---NICHRDVKPSNILMDKNGRVKLSDFGE---SEYMVDKKIKGSR 211
Query: 510 -SLKIND------ISNQMC-STIKADVYGFGVILLELLTGKL 543
+ + SN+ + K D++ G+ L + +
Sbjct: 212 GTY---EFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVV 250
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 8e-09
Identities = 53/296 (17%), Positives = 108/296 (36%), Gaps = 73/296 (24%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
+ LG G+ G + +A+K +++ S+S ++F + + ++ H ++ C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG-VC 88
Query: 412 SKQE-KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470
+KQ ++ EY NG L N L E F L + V +A+ L
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEY----LESKQFL 142
Query: 471 HGNLKSNNILFNNNMEPCISEYGL--IVTEN--------------------HDQSFLAQT 508
H +L + N L N+ +S++GL V ++ F
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF---- 198
Query: 509 SSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF 568
+ K+D++ FGV++ E+ + + F + E
Sbjct: 199 --------------SSKSDIWAFGVLMWEIYSLGKMPYERFTNS-------------ETA 231
Query: 569 DEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617
+ + A R+ + + + C ++ +ERP+ + I ++ +EE
Sbjct: 232 EHI-----AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 8e-09
Identities = 57/259 (22%), Positives = 87/259 (33%), Gaps = 65/259 (25%)
Query: 317 SITSVDSGAASSSLVVLTSSKVNKLKFED--LLRAPAELLGRGKHGSLYRVVL----DDG 370
+ A S + K + ED + +LG G VVL
Sbjct: 3 GTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGK----ILGEGSFS---TVVLARELATS 55
Query: 371 LMLAVKRLRDWSISSEDFKNRMQKIDHVK----------HPNVLPPLAYYCSKQEKL-LV 419
A+K L I + K+ +V HP + L + EKL
Sbjct: 56 REYAIKILEKRHII------KENKVPYVTRERDVMSRLDHPFFVK-LYFTFQDDEKLYFG 108
Query: 420 YEYQPNGSLFNLLHGSENGQSFDWGSRLRV-AACVAKALALIHEELREDGIAHGNLKSNN 478
Y NG L + SFD + R A + AL +H + GI H +LK N
Sbjct: 109 LSYAKNGELLKYI---RKIGSFD-ETCTRFYTAEIVSALEYLHGK----GIIHRDLKPEN 160
Query: 479 ILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTI-------------- 524
IL N +M I+++G +S A+ +S T
Sbjct: 161 ILLNEDMHIQITDFGT-AKVLSPESKQARANSF---------VGTAQYVSPELLTEKSAC 210
Query: 525 KA-DVYGFGVILLELLTGK 542
K+ D++ G I+ +L+ G
Sbjct: 211 KSSDLWALGCIIYQLVAGL 229
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 9e-09
Identities = 46/225 (20%), Positives = 74/225 (32%), Gaps = 63/225 (28%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVK-------RLRDWSISSEDFKNRMQKIDHVKHPNV 403
E LG G+ + + GL A K R +S E+ + + + V H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK---- 455
+ Y ++ + +L+ E G LF+ L SE A K
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-----------EEATSFIKQILD 126
Query: 456 ALALIHEELREDGIAHGNLKSNNILFNNNMEPC----ISEYGLIVTENHDQSFLAQTSSL 511
+ +H + IAH +LK NI+ + P + ++GL F
Sbjct: 127 GVNYLHTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF------- 175
Query: 512 KINDISNQMCST--------IKADVYGF-------GVILLELLTG 541
+ T + + G GVI LL+G
Sbjct: 176 ------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 74/370 (20%), Positives = 129/370 (34%), Gaps = 76/370 (20%)
Query: 284 TDVIKKEVALDINSNKRSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKF 343
D I L + K++ +++ G N +++++ + V+ + F
Sbjct: 34 LDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLSALNPELVQAVQHVVIGPSSLIVHF 93
Query: 344 EDLLRAPAELLGRGKHGSLYRVVLDDG----LMLAVKRLRDWSISSE--DFKNRMQKIDH 397
E++GRG G +Y L D + AVK L + E F +
Sbjct: 94 N-------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 146
Query: 398 VKHPNVLPPLAYYCSKQEK--LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAK 455
HPNVL L C + E L+V Y +G L N + + + VAK
Sbjct: 147 FSHPNVLSLLG-ICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAK 203
Query: 456 ALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTS---- 509
+ L H +L + N + + ++++GL + + S +T
Sbjct: 204 GMKF----LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 259
Query: 510 -------SLKINDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHS 557
SL+ T K+DV+ FGV+L EL+T G V
Sbjct: 260 VKWMALESLQTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTF---------- 303
Query: 558 VVREEWTVEVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMI 610
++ +L R+L+ L +V L+C + RPS +++ I
Sbjct: 304 --------DITVYLL-----QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 350
Query: 611 NNIKEEEERS 620
+ I
Sbjct: 351 SAIFSTFIGE 360
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 1e-08
Identities = 17/110 (15%), Positives = 31/110 (28%), Gaps = 3/110 (2%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSL-SKLNNLKRLDISNN 156
Q L + + +G S + QL L + N L + L L++S
Sbjct: 204 QVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFT 263
Query: 157 NFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGP 206
L + L N+L + + ++ N
Sbjct: 264 GLKQVPKGLP--AKLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 4e-08
Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 10/131 (7%)
Query: 84 NLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNC----KQLTHLYVGRNK---LSG 136
S V +L L L +N G + C L L + SG
Sbjct: 159 AHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSG 218
Query: 137 NLPDSLSKLNNLKRLDISNNNFSSELPDL--SRISGLLTFFAENNQLRGGIPEFDFSNLL 194
+ L+ LD+S+N+ S L + L+ +P+ + L
Sbjct: 219 VCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLS 277
Query: 195 QFNVSNNNLSG 205
++S N L
Sbjct: 278 VLDLSYNRLDR 288
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 21/153 (13%), Positives = 48/153 (31%), Gaps = 15/153 (9%)
Query: 74 SVRKIVLDGFNLSGILDTTSV-CKTQSLVVLSLEENNIAGTVSQ--EISNCKQ--LTHLY 128
++++ L+ ++G + L +L+L + A + E+ + L L
Sbjct: 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLS 155
Query: 129 VGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP-----DLSRISGLLTFFAENNQLRG 183
+ + + + L LD+S+N E + L N +
Sbjct: 156 IAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMET 215
Query: 184 GIPEF-----DFSNLLQFNVSNNNLSGPVPGVN 211
L ++S+N+L +
Sbjct: 216 PSGVCSALAAARVQLQGLDLSHNSLRDAAGAPS 248
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 5e-05
Identities = 22/138 (15%), Positives = 48/138 (34%), Gaps = 12/138 (8%)
Query: 80 LDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLP 139
D + I+ + S+ + L V + + + + L L + +++G P
Sbjct: 56 ADLGQFTDIIKSLSL---KRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAP 112
Query: 140 DSLSKL--NNLKRLDISNNNFSSELPDLSRIS-----GLLTFFAENNQLRGGIPEF--DF 190
L + +L L++ N ++++ L+ + GL E F
Sbjct: 113 PPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172
Query: 191 SNLLQFNVSNNNLSGPVP 208
L ++S+N G
Sbjct: 173 PALSTLDLSDNPELGERG 190
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 60/305 (19%), Positives = 108/305 (35%), Gaps = 56/305 (18%)
Query: 352 ELLGRGKHGSLYRVVLDD-----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVL 404
LG G G + D G M+AVK L+ + +K + + + H +++
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 405 PPLAYY--CSKQEK---LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALAL 459
Y C LV EY P GSL + L S L A + + +A
Sbjct: 97 ---KYKGCCEDAGAASLQLVMEYVPLGSLRDYLP----RHSIGLAQLLLFAQQICEGMAY 149
Query: 460 IHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTS-------- 509
+H + H +L + N+L +N+ I ++GL V E H+ + +
Sbjct: 150 LHAQ----HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY-YRVREDGDSPVFWY 204
Query: 510 ---SLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTV 565
LK +DV+ FGV L ELLT Q+ + + +
Sbjct: 205 APECLKEYKF------YYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL 258
Query: 566 EVFDEVLIAEAASEERM-------LKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618
+ + + ER+ ++ + C + RP+ + ++ + E+ +
Sbjct: 259 RLTELL-----ERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313
Query: 619 RSISS 623
S
Sbjct: 314 GQAPS 318
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 41/218 (18%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKR--LRDWSISSEDFKNRMQKIDHVKHPNVLPPLA 408
E++G G + +A+KR L S ++ +Q + HPN++ +
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV---S 77
Query: 409 YYCS--KQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWG--SRLRVAAC---VAKALALI 460
YY S +++L LV + GS+ +++ G +A V + L +
Sbjct: 78 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQM 520
H+ G H ++K+ NIL + I+++G V+ +FLA + N +
Sbjct: 138 HKN----GQIHRDVKAGNILLGEDGSVQIADFG--VS-----AFLATGGDITRNKVRKTF 186
Query: 521 CST----------------IKADVYGFGVILLELLTGK 542
T KAD++ FG+ +EL TG
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 224
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 18/135 (13%)
Query: 98 QSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNL--PDSLSKLNNLKRLDIS 154
++L L + EN I V + + + Q+ + +G N L + + + L + I+
Sbjct: 121 KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA 179
Query: 155 NNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVN 211
+ N ++ +P L + N++ + L L +S N++S
Sbjct: 180 DTNITT-IPQGL-PPSLTELHLDGNKIT-KVDAASLKGLNNLAKLGLSFNSIS------- 229
Query: 212 GRLGADSFSGNPGLC 226
+ S + P L
Sbjct: 230 -AVDNGSLANTPHLR 243
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 18/133 (13%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+L L+ N I + N K L L + NK+S P + + L L+RL +S N
Sbjct: 53 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 112
Query: 159 SS---ELPDLSRISGLLTFFAENNQLRGGIPEFDFS---NLLQFNVSNNNLSGPVPGVNG 212
++P L N++ + + F+ ++ + N L +
Sbjct: 113 KELPEKMP-----KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLK------SS 160
Query: 213 RLGADSFSGNPGL 225
+ +F G L
Sbjct: 161 GIENGAFQGMKKL 173
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 6e-07
Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 16/137 (11%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
SL L L+ N I + + L L + N +S SL+ +L+ L ++NN
Sbjct: 192 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK 251
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFDF---------SNLLQFNVSNNNLSGPVP 208
L+ + + NN + I DF ++ ++ +N +
Sbjct: 252 LVKVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQ---- 306
Query: 209 GVNGRLGADSFSGNPGL 225
+ +F
Sbjct: 307 --YWEIQPSTFRCVYVR 321
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 48/299 (16%), Positives = 110/299 (36%), Gaps = 68/299 (22%)
Query: 352 ELLGRGKHGSLYRVVLDDG-----LMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVL 404
++LG G G++Y+ + + +A+K LR+ + ++++ + + V +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
L C L+ + P G L + + E+ + L +AK + L
Sbjct: 81 RLLGI-CLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY----L 133
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLK---------- 512
+ + H +L + N+L I+++GL ++ + K
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALES 190
Query: 513 INDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWTVEV 567
I T ++DV+ +GV + EL+T G + + E+
Sbjct: 191 ILHRIY----THQSDVWSYGVTVWELMTFGSKPYDGIPAS------------------EI 228
Query: 568 FDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINNIKEEEER 619
+ ER+ + + + ++C + RP ++ + + + + +R
Sbjct: 229 SSILE-----KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 282
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 1e-08
Identities = 56/298 (18%), Positives = 106/298 (35%), Gaps = 61/298 (20%)
Query: 352 ELLGRGKHGS----LYRVVLDDGLMLAVKRLRDWSISS----EDFK---NRMQKIDHVKH 400
E LG G G + + +AVK L+ +S +DF N M +DH
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH--- 80
Query: 401 PNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALI 460
N++ +V E P GSL + L ++ F G+ R A VA+ +
Sbjct: 81 RNLIRLYGV-VLTPPMKMVTELAPLGSLLDRLR--KHQGHFLLGTLSRYAVQVAEGMGY- 136
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKINDIS- 517
L H +L + N+L I ++GL + +N D + + + +
Sbjct: 137 ---LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 518 ---NQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWTVEVFD 569
+ +D + FGV L E+ T G+ + + ++
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------------------QILH 235
Query: 570 EVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINNIKEEEERS 620
++ ER+ + + V ++C P +RP+ + + + + R+
Sbjct: 236 KID----KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA 289
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 1e-08
Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 8/118 (6%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
++ + + + S HL N L+ + ++ L L+ L + N
Sbjct: 301 NMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQL 360
Query: 159 SSELPDLSRI----SGLLTFFAENNQLRGGIPEFDFS---NLLQFNVSNNNLSGPVPG 209
L ++ + L N + + D S +LL N+S+N L+ +
Sbjct: 361 KE-LSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFR 417
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 7e-08
Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS--GNLPDSLSKLNNLKRLDISNN 156
+ L N + TV + + +L L + N+L + + +++ +L++LDIS N
Sbjct: 325 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQN 384
Query: 157 NFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
+ S + S LL+ +N L I + ++ +N +
Sbjct: 385 SVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK 434
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 6e-06
Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+L++ +N I+ + +I + +L L + N++ L+ LD+S+N
Sbjct: 22 KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL 81
Query: 159 SSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLS 204
+ L N +F N+ L+F +S +L
Sbjct: 82 VK-IS-CHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLE 128
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 22/112 (19%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
Query: 99 SLVVLSLEENNIA--GTVSQEISNCKQLTHLYVGRNKLSGNLPDSL-SKLNNLKRLDISN 155
L L L+ N + +++ + K L L + +N +S + S +L L++S+
Sbjct: 349 ELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSS 408
Query: 156 NNFSSELPDLSRISGLLTFFA-ENNQLRGGIPE--FDFSNLLQFNVSNNNLS 204
N + + + + +N+++ IP+ L + NV++N L
Sbjct: 409 NILTDTIFR--CLPPRIKVLDLHSNKIKS-IPKQVVKLEALQELNVASNQLK 457
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 96 KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISN 155
T+SL+ L++ N + T+ + + ++ L + NK+ ++P + KL L+ L++++
Sbjct: 397 WTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVAS 453
Query: 156 NNFSSELPD--LSRISGLLTFFAENNQL 181
N S +PD R++ L + N
Sbjct: 454 NQLKS-VPDGIFDRLTSLQKIWLHTNPW 480
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 14/132 (10%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+ + L N I+ + C+ LT L++ N L+ + + L L++LD+S+N
Sbjct: 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92
Query: 159 SSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVNGR 213
+ + L T + L+ + F L LQ+ + +N L
Sbjct: 93 LRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQ--------A 143
Query: 214 LGADSFSGNPGL 225
L D+F L
Sbjct: 144 LPDDTFRDLGNL 155
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+L L L++N + + LTHL++ N++S + L++L RL + N
Sbjct: 130 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189
Query: 159 SSELPD--LSRISGLLTFFAENNQLRGGIPEFDF---SNLLQFNVSNNNL 203
+ + + L+T + N L +P L +++N
Sbjct: 190 AH-VHPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDNPW 237
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 56/295 (18%), Positives = 109/295 (36%), Gaps = 54/295 (18%)
Query: 352 ELLGRGKHGSLYRVVLD-----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVL 404
LG G G + D G +AVK L+ S D K ++ + ++ H N++
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 405 PPLAYY--CSKQEK---LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALAL 459
Y C++ L+ E+ P+GSL L +N + +L+ A + K +
Sbjct: 87 ---KYKGICTEDGGNGIKLIMEFLPSGSLKEYLP--KNKNKINLKQQLKYAVQICKGMDY 141
Query: 460 IHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTS-------- 509
+ H +L + N+L + + I ++GL + + + + +
Sbjct: 142 LGSR----QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE-YYTVKDDRDSPVFWY 196
Query: 510 ---SLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV- 565
L + I +DV+ FGV L ELLT ++ L + + TV
Sbjct: 197 APECLMQSKF------YIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVT 250
Query: 566 EVFDEVLIAEAASEERM-------LKLLQVALRCINQSPNERPSMNQVAVMINNI 613
+ + + +R+ ++ Q+ +C P+ R S + +
Sbjct: 251 RLVNTL-----KEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 45/225 (20%), Positives = 74/225 (32%), Gaps = 63/225 (28%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVK-------RLRDWSISSEDFKNRMQKIDHVKHPNV 403
E LG G+ + + GL A K R + E+ + + + V HPN+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK---- 455
+ Y ++ + +L+ E G LF+ L SE A K
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-----------EEATSFIKQILD 126
Query: 456 ALALIHEELREDGIAHGNLKSNNILFNNNMEPC----ISEYGLIVTENHDQSFLAQTSSL 511
+ +H + IAH +LK NI+ + P + ++GL F
Sbjct: 127 GVNYLHTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF------- 175
Query: 512 KINDISNQMCST--------IKADVYGF-------GVILLELLTG 541
+ T + + G GVI LL+G
Sbjct: 176 ------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 49/228 (21%), Positives = 75/228 (32%), Gaps = 62/228 (27%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDH---VKHPN----- 402
E LG G G + R + D G +A+K+ R +S ++ + +I + HPN
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQ-ELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 403 -VLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIH 461
V L LL EY G L L+ EN G + + ++ AL +H
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 138
Query: 462 EELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIND------ 515
E I H +LK NI+ + I KI D
Sbjct: 139 EN----RIIHRDLKPENIVLQPGPQRLI---------------------HKIIDLGYAKE 173
Query: 516 -ISNQMCSTI-------------------KADVYGFGVILLELLTGKL 543
++C+ D + FG + E +TG
Sbjct: 174 LDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 3e-08
Identities = 45/219 (20%), Positives = 75/219 (34%), Gaps = 57/219 (26%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
+LG+G G + + AVK + S ++D +++++ + HPN++
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 408 AYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK----ALAL 459
+V E G LF+ + SE AA + K +
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-----------HDAARIIKQVFSGITY 136
Query: 460 IHEELREDGIAHGNLKSNNILFNNNMEPC---ISEYGLIVTENHDQSFLAQTSSLKINDI 516
+H+ I H +LK NIL + + C I ++GL +
Sbjct: 137 MHKH----NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM------------ 180
Query: 517 SNQMCST--------------IKADVYGFGVILLELLTG 541
T K DV+ GVIL LL+G
Sbjct: 181 -KDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSG 218
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 3e-08
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L +L L+ NN+ T + + N L + + N+L + K+ L+RL ISNN
Sbjct: 232 VELTILKLQHNNL--TDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNR 289
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNNLS 204
+ I L +N L + F L + +N++
Sbjct: 290 LVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 337
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 2e-07
Identities = 37/274 (13%), Positives = 82/274 (29%), Gaps = 19/274 (6%)
Query: 89 LDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNL 148
+ K Q L L + N + ++ L L + N L ++ + + + L
Sbjct: 269 IMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRL 326
Query: 149 KRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208
+ L + +N+ + L LS L +N F N+ + V + + +
Sbjct: 327 ENLYLDHNSIVT-LK-LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKID 384
Query: 209 GVNGRLGADSFSGNPGLCGKPLPN------ACPPTPPPIKESKGSSTNQVFLFSGYILLG 262
G + + L + S + N V S YI
Sbjct: 385 -YQLEHGLCCKESDKPYLDRLLQYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYITQQ 443
Query: 263 LFILLLVVLKLVSKNKQKEEKTDVIKKE--------VALDINSNKRSSISSVHRAGDNRS 314
+ L +L ++ + + + E L + + + G RS
Sbjct: 444 GGVPLQGNEQLEAEVNELRAEVQQLTNEQIQQEQLLQGLHAEIDTNLRRYRLPKDGLARS 503
Query: 315 EYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLR 348
++ V + L ++ + + + +
Sbjct: 504 SDNLNKVFTHLKERQAFKLRETQARRTEADAKQK 537
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 2e-07
Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 4/118 (3%)
Query: 89 LDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNL 148
+DT + ++ L + N I N LT L + RN LS L
Sbjct: 90 IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKL 149
Query: 149 KRLDISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
L +SNNN + D + L +N+L + +L NVS N LS
Sbjct: 150 TTLSMSNNNLER-IEDDTFQATTSLQNLQLSSNRLT-HVDLSLIPSLFHANVSYNLLS 205
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 1e-05
Identities = 25/145 (17%), Positives = 49/145 (33%), Gaps = 28/145 (19%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK----------------LSGNLPDS 141
L LS+ NN+ L +L + N+ +S NL +
Sbjct: 147 PKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLST 206
Query: 142 LSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSN 200
L+ ++ LD S+N+ + + L ++N L ++ L++ ++S
Sbjct: 207 LAIPIAVEELDASHNSINV-VRGPV-NVELTILKLQHNNLT-DTAWLLNYPGLVEVDLSY 263
Query: 201 NNLSGPVPGVNGRLGADSFSGNPGL 225
N L ++ F L
Sbjct: 264 NELE--------KIMYHPFVKMQRL 280
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 4e-05
Identities = 17/128 (13%), Positives = 38/128 (29%), Gaps = 15/128 (11%)
Query: 103 LSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSEL 162
+ ++ E + + + L ++ L++++ E+
Sbjct: 32 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI-EEI 90
Query: 163 PD--LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVNGRLGAD 217
+ + + N +R +P F N+ L + N+LS L
Sbjct: 91 DTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS--------SLPRG 141
Query: 218 SFSGNPGL 225
F P L
Sbjct: 142 IFHNTPKL 149
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 3e-08
Identities = 59/300 (19%), Positives = 126/300 (42%), Gaps = 54/300 (18%)
Query: 352 ELLGRGKHGSLYRVVLD-----DGLMLAVKRLRDWSIS-SEDFKNRMQKIDHVKHPNVLP 405
+ LG+G GS+ D G ++AVK+L+ + DF+ ++ + ++H N++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV- 74
Query: 406 PLAYY--CSKQEK---LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALI 460
Y C + L+ EY P GSL + L ++ + D L+ + + K + +
Sbjct: 75 --KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL 130
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTS--------- 509
+ H +L + NIL N I ++GL ++ ++ + F +
Sbjct: 131 GTK----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-FFKVKEPGESPIFWYA 185
Query: 510 --SLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTV- 565
SL + ++ +DV+ FGV+L EL T + ++ + + + + V
Sbjct: 186 PESLTESKF------SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239
Query: 566 EVFDEVLIAEAASEERM-------LKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618
+ + + + R+ ++ + C N + N+RPS +A+ ++ I++
Sbjct: 240 HLIELL-----KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 4e-08
Identities = 58/301 (19%), Positives = 117/301 (38%), Gaps = 62/301 (20%)
Query: 352 ELLGRGKHGSLYRVVLDDG-----LMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVL 404
++LG G G++++ V + + +K + D S S + + M I + H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
L C LV +Y P GSL + + ++ + L +AK + L
Sbjct: 79 RLLGL-CPGSSLQLVTQYLPLGSLLDHVR--QHRGALGPQLLLNWGVQIAKGMYY----L 131
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS---LK------IND 515
E G+ H NL + N+L + + ++++G+ D L + + +K I+
Sbjct: 132 EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191
Query: 516 ISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWTVEVFDE 570
T ++DV+ +GV + EL+T G ++ EV D
Sbjct: 192 ----GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA------------------EVPDL 229
Query: 571 VLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSISS 623
+ ER+ + + V ++C N RP+ ++A + + R +
Sbjct: 230 L-----EKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVI 284
Query: 624 E 624
+
Sbjct: 285 K 285
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 23/134 (17%), Positives = 47/134 (35%), Gaps = 15/134 (11%)
Query: 98 QSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156
+ L L + +N+ + + + L +L + + L++L+ L ++ N
Sbjct: 101 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160
Query: 157 NFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVN 211
+F + + L QL + F++L LQ N+S+NN
Sbjct: 161 SFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFF------- 212
Query: 212 GRLGADSFSGNPGL 225
L + L
Sbjct: 213 -SLDTFPYKCLNSL 225
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 34/162 (20%), Positives = 59/162 (36%), Gaps = 23/162 (14%)
Query: 59 CSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENN 109
CSG + C+S+ S ++ L+ L L K L LSL N
Sbjct: 7 CSGTEI--RCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNG 63
Query: 110 IA--GTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSR 167
++ G SQ L +L + N + + + L L+ LD ++N + + S
Sbjct: 64 LSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ-MSEFSV 121
Query: 168 ISGL--LTF-FAENNQLRGGIPEFDFSNL--LQF-NVSNNNL 203
L L + + R F+ L L+ ++ N+
Sbjct: 122 FLSLRNLIYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSF 162
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 2/88 (2%)
Query: 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNC-KQLTHLYVGRN 132
S+ + + G + + ++L L L + + +S N L L + N
Sbjct: 151 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHN 209
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSS 160
LN+L+ LD S N+ +
Sbjct: 210 NFFSLDTFPYKCLNSLQVLDYSLNHIMT 237
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 4e-08
Identities = 44/218 (20%), Positives = 72/218 (33%), Gaps = 56/218 (25%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS-EDFKNRMQKIDHVKHPNVLPPLAY 409
E LG G G ++RV G A K + S E + +Q + ++HP ++
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 410 YCSKQEKLLVYEYQPNGSLFNLL-----HGSENGQSFDWGSRLRVAACVAK----ALALI 460
+ E +++YE+ G LF + SE A + L +
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSE-----------DEAVEYMRQVCKGLCHM 271
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPCI--SEYGLIVTENHDQSFLAQTSSLKINDISN 518
HE H +LK NI+F + ++GL + QS
Sbjct: 272 HEN----NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-------------K 314
Query: 519 QMCST--------IKADVYGF-------GVILLELLTG 541
T + G+ GV+ LL+G
Sbjct: 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 5e-08
Identities = 58/300 (19%), Positives = 127/300 (42%), Gaps = 54/300 (18%)
Query: 352 ELLGRGKHGSLYRVVLD-----DGLMLAVKRLRDWSIS-SEDFKNRMQKIDHVKHPNVLP 405
+ LG+G GS+ D G ++AVK+L+ + DF+ ++ + ++H N++
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV- 105
Query: 406 PLAYY--CSKQEK---LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALI 460
Y C + L+ EY P GSL + L ++ + D L+ + + K + +
Sbjct: 106 --KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL 161
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTS--------- 509
+ H +L + NIL N I ++GL ++ ++ + + +
Sbjct: 162 GTK----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-YYKVKEPGESPIFWYA 216
Query: 510 --SLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTV- 565
SL + ++ +DV+ FGV+L EL T + ++ + + + + V
Sbjct: 217 PESLTESKF------SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270
Query: 566 EVFDEVLIAEAASEERM-------LKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618
+ + + + R+ ++ + C N + N+RPS +A+ ++ I+++
Sbjct: 271 HLIELL-----KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 6e-08
Identities = 53/322 (16%), Positives = 97/322 (30%), Gaps = 96/322 (29%)
Query: 352 ELLGRGKHGSLYR--------VVLDDGLMLAVKRLRDWSIS-SEDFK---NRMQKIDHVK 399
E LG+G +++ + +K L + SE F + M K+ H
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH-- 71
Query: 400 HPNVLPPLAYYCSKQE-KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALA 458
+++ C + +LV E+ GSL L +N + +L VA +A A+
Sbjct: 72 -KHLVLNYGV-CVCGDENILVQEFVKFGSLDTYLK--KNKNCINILWKLEVAKQLAAAMH 127
Query: 459 LIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIND--- 515
L E+ + HGN+ + NIL + I K++D
Sbjct: 128 F----LEENTLIHGNVCAKNILLIREEDRKTGNPPFI----------------KLSDPGI 167
Query: 516 ---------------------ISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGF 549
I N + D + FG L E+ + G + +
Sbjct: 168 SITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-- 225
Query: 550 NLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK-----LLQVALRCINQSPNERPSMN 604
++ L + C++ P+ RPS
Sbjct: 226 ----------------RKLQFY-----EDRHQLPAPKAAELANLINNCMDYEPDHRPSFR 264
Query: 605 QVAVMINNIKEEEERSISSEAR 626
+ +N++ + S
Sbjct: 265 AIIRDLNSLFTPDLVPRGSHHH 286
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 7e-08
Identities = 54/289 (18%), Positives = 112/289 (38%), Gaps = 63/289 (21%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFK---NRMQKIDHVKHPNVLPPLA 408
+ +G+G+ G + G +AVK +++ +++ F + M ++ +H N++ L
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQL---RHSNLVQLLG 253
Query: 409 YYCSKQEKLL--VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRE 466
+++ L V EY GSL + L S L+ + V +A+ L
Sbjct: 254 V-IVEEKGGLYIVTEYMAKGSLVDYLR-SRGRSVLGGDCLLKFSLDVCEAMEY----LEG 307
Query: 467 DGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQ--TS--SLKINDISNQM 520
+ H +L + N+L + + +S++GL + D L T+ +L+
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF---- 363
Query: 521 CSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575
+ K+DV+ FG++L E+ + G++ + +V V
Sbjct: 364 --STKSDVWSFGILLWEIYSFGRVPYPRIPLK------------------DVVPRV---- 399
Query: 576 AASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617
+M + V C + RP+ Q+ + +I+ E
Sbjct: 400 -EKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 7e-08
Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 88 ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISN--CKQLTHLYVGRNKLSGNLPDSLSKL 145
I D + + L LS+ N + + ++ L+ L++ N+L DSL L
Sbjct: 75 ISDLSPLKDLTKLEELSVNRNRL-----KNLNGIPSACLSRLFLDNNELRD--TDSLIHL 127
Query: 146 NNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
NL+ L I NN S + L +S L N++ + +++
Sbjct: 128 KNLEILSIRNNKLKS-IVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCV 185
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 118 ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAE 177
+G+ ++ S +L+ ++ + N+N S L + + L
Sbjct: 15 DPGLANAVKQNLGKQSVTD--LVSQKELSGVQNFNGDNSNIQS-LAGMQFFTNLKELHLS 71
Query: 178 NNQLRGGIPEFDFSNLLQFNVSNNNLS 204
+NQ+ P D + L + +V+ N L
Sbjct: 72 HNQISDLSPLKDLTKLEELSVNRNRLK 98
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 19/121 (15%), Positives = 45/121 (37%), Gaps = 11/121 (9%)
Query: 88 ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNN 147
+ DT S+ ++L +LS+ N + + +L L + N+++ L++L
Sbjct: 118 LRDTDSLIHLKNLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKK 173
Query: 148 LKRLDISNNNFSSE-LPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQF---NVSNNNL 203
+ +D++ +E + + T + + I + SN + V
Sbjct: 174 VNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRW---ISPYYISNGGSYVDGCVLWELP 230
Query: 204 S 204
Sbjct: 231 V 231
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 7e-08
Identities = 49/239 (20%), Positives = 102/239 (42%), Gaps = 40/239 (16%)
Query: 327 SSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS 385
SS + ++ + EDL +GRG +GS+ ++V G ++AVKR+R ++
Sbjct: 5 SSGKLKISPEQHWDFTAEDL--KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIR-STVDE 61
Query: 386 EDFKNRMQKIDHVK----HPNVLPPLAYYCS--KQEKL-LVYEYQPNGSLFNLLH--GSE 436
++ K + +D V P ++ +Y + ++ + E + S S
Sbjct: 62 KEQKQLLMDLDVVMRSSDCPYIV---QFYGALFREGDCWICMELM-STSFDKFYKYVYSV 117
Query: 437 NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYG--- 493
++ KAL + E L+ I H ++K +NIL + + + ++G
Sbjct: 118 LDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISG 174
Query: 494 -LIVTENHDQSFLAQTSSL---------KINDISNQMCSTIKADVYGFGVILLELLTGK 542
L+ + +A+T +I+ +++ +++DV+ G+ L EL TG+
Sbjct: 175 QLVDS-------IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 8e-08
Identities = 35/211 (16%), Positives = 74/211 (35%), Gaps = 43/211 (20%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY 410
E LGRG+ G ++R V K ++ K + ++ +H N+L +
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70
Query: 411 CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAAC---VAKALALIHEELRED 467
S +E ++++E+ +F + + + + + + V +AL +H
Sbjct: 71 ESMEELVMIFEFISGLDIFERI--NTSAFEL---NEREIVSYVHQVCEALQFLHSH---- 121
Query: 468 GIAHGNLKSNNILFNNNMEPC--ISEYGLIVTENHDQSFLAQTSSLKINDISNQMCST-- 523
I H +++ NI++ I E+G +F + +
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF-------------RLLFTAPE 168
Query: 524 ------IKADVYGF-------GVILLELLTG 541
+ DV G ++ LL+G
Sbjct: 169 YYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 45/255 (17%), Positives = 77/255 (30%), Gaps = 68/255 (26%)
Query: 322 DSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRD 380
SG + + S N F + ++ LGRGK + + + G A K L+
Sbjct: 8 SSGVDLGTENLYFQSMEN---FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKK 64
Query: 381 WSISSEDFKNR------MQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLL-- 432
+ ++ P V+ Y + E +L+ EY G +F+L
Sbjct: 65 RRRGQDCRAEILHEIAVLELAKS--CPRVINLHEVYENTSEIILILEYAAGGEIFSLCLP 122
Query: 433 ----HGSENGQSFDWGSRLRVAACVAK----ALALIHEELREDGIAHGNLKSNNILFNNN 484
SE + K + +H+ I H +LK NIL ++
Sbjct: 123 ELAEMVSE-----------NDVIRLIKQILEGVYYLHQN----NIVHLDLKPQNILLSSI 167
Query: 485 MEPC---ISEYGLIVTENHDQSFLAQTSSLKINDISNQMCST--------IKADVYGF-- 531
I ++G+ H ++ T + D
Sbjct: 168 YPLGDIKIVDFGMSRKIGHACEL-------------REIMGTPEYLAPEILNYDPITTAT 214
Query: 532 -----GVILLELLTG 541
G+I LLT
Sbjct: 215 DMWNIGIIAYMLLTH 229
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 16/134 (11%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLP-DSLSKLNNLKRLDISNNN 157
+ + L + S L + + +N + + D S L L + I N
Sbjct: 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90
Query: 158 FSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNV----SNNNLSGPVPGVN 211
+ + L N ++ +P+ + LQ + N N+
Sbjct: 91 NLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIH------- 142
Query: 212 GRLGADSFSGNPGL 225
+ +SF G
Sbjct: 143 -TIERNSFVGLSFE 155
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
Query: 99 SLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPD-SLSKLNNLKRLDISNN 156
L + +E+ N ++ E N L +L + + +LPD LDI +N
Sbjct: 80 KLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDN 138
Query: 157 NFSSELPDLS---RISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNN 202
+ S + + N ++ I F+ + L + N+S+NN
Sbjct: 139 INIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNN 188
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 41/225 (18%), Positives = 74/225 (32%), Gaps = 63/225 (28%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVK-------RLRDWSISSEDFKNRMQKIDHVKHPNV 403
E LG G+ + + G A K +S E+ + + + ++HPN+
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK---- 455
+ + +K + +L+ E G LF+ L +E A K
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-----------DEATQFLKQILD 119
Query: 456 ALALIHEELREDGIAHGNLKSNNILFNNNMEPC----ISEYGLIVTENHDQSFLAQTSSL 511
+ +H + IAH +LK NI+ + P + ++G+ F
Sbjct: 120 GVHYLHSK----RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF------- 168
Query: 512 KINDISNQMCST--------IKADVYGF-------GVILLELLTG 541
+ T + + G GVI LL+G
Sbjct: 169 ------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 55/296 (18%), Positives = 111/296 (37%), Gaps = 47/296 (15%)
Query: 352 ELLGRGKHGSLYRVVLD-----DGLMLAVKRLRDWSISSE-DFKNRMQKIDHVKHPNVLP 405
LG+G GS+ D G ++AVK+L+ + DF+ +Q + + ++
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 406 PLA--YYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
Y +Q LV EY P+G L + L + D L ++ + K + +
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEYLGSR 146
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTS-----------S 510
H +L + NIL + I+++GL ++ + D ++ + S
Sbjct: 147 ----RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY-YVVREPGQSPIFWYAPES 201
Query: 511 LKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFD 569
L N + ++DV+ FGV+L EL T + + + +
Sbjct: 202 LSDNIF------SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE 255
Query: 570 EVLIAEAASEERM-------LKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618
+ +R+ ++ ++ C SP +RPS + + ++ +
Sbjct: 256 LL-----EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 47/218 (21%), Positives = 79/218 (36%), Gaps = 49/218 (22%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVK-------RLRDWSISSEDFKNRMQKIDHVKHPNV 403
E LG G+ + + GL A K + +S ED + + + ++HPNV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK---- 455
+ Y +K + +L+ E G LF+ L +E A K
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----------EEATEFLKQILN 125
Query: 456 ALALIHEELREDGIAHGNLKSNNILFNNNMEP----CISEYGLIVTENHDQSFLAQTSS- 510
+ +H IAH +LK NI+ + P I ++GL + F +
Sbjct: 126 GVYYLHSL----QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 511 -------LKINDISNQMCSTIKADVYGFGVILLELLTG 541
+ + +AD++ GVI LL+G
Sbjct: 182 EFVAPEIVNYEPLGL------EADMWSIGVITYILLSG 213
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+L L+ N+I+ + + L L + NK+S + S L L++L IS N+
Sbjct: 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHL 114
Query: 159 SSELPDLSRISGLLTFFAENNQLRGGIPEFDFS---NLLQFNVSNNNLSGPVPGVNGRLG 215
P+L L+ +N++R +P+ FS N+ + N L N
Sbjct: 115 VEIPPNLPS--SLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLE------NSGFE 165
Query: 216 ADSFSG 221
+F G
Sbjct: 166 PGAFDG 171
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 16/137 (11%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
++L L L+ N I +++ +L L +G N++ SLS L L+ L + NN
Sbjct: 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNK 252
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQF---------NVSNNNLSGPVP 208
S L + L + N + + DF + ++ NN +
Sbjct: 253 LSRVPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVP---- 307
Query: 209 GVNGRLGADSFSGNPGL 225
+ +F
Sbjct: 308 --YWEVQPATFRCVTDR 322
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 17/133 (12%)
Query: 98 QSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKL-SGNLPDSLSKLNNLKRLDISN 155
SLV L + +N I V + + S + + + +G N L + L L IS
Sbjct: 123 SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISE 181
Query: 156 NNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVNG 212
+ DL L ++N+++ I D L + +N +
Sbjct: 182 AKLTGIPKDL--PETLNELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIR-------- 230
Query: 213 RLGADSFSGNPGL 225
+ S S P L
Sbjct: 231 MIENGSLSFLPTL 243
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 2e-07
Identities = 54/308 (17%), Positives = 109/308 (35%), Gaps = 88/308 (28%)
Query: 352 ELLGRGKHGSLYRVVLDDG----LMLAVKRLRDWSISS--EDFKNRMQKIDHVKHPNVLP 405
+G G+ G +++ + L +A+K ++ + S E F + HP+++
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
+ ++ ++ E G L + L S D S + A ++ ALA L
Sbjct: 81 LIGV-ITENPVWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTALAY----LE 133
Query: 466 EDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTEN--------------------HDQS 503
H ++ + N+L ++N + ++GL + ++ + +
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSV 558
F T +DV+ FGV + E+L G V+NN
Sbjct: 194 F------------------TSASDVWMFGVCMWEILMHGVKPFQGVKNN----------- 224
Query: 559 VREEWTVEVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMIN 611
+V + + ER+ L + +C P+ RP ++ ++
Sbjct: 225 -------DVIGRI-----ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272
Query: 612 NIKEEEER 619
I EEE+
Sbjct: 273 TILEEEKA 280
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 44/216 (20%), Positives = 73/216 (33%), Gaps = 52/216 (24%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVK-----RLRDWSISSEDFKNRMQKIDHVKHPNVLP 405
E LG G G ++R V G + K D KN + ++ + HP ++
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD----KYTVKNEISIMNQLHHPKLIN 112
Query: 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAAC---VAKALALIHE 462
+ K E +L+ E+ G LF+ + + S V + L +HE
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRI--AAEDYKM---SEAEVINYMRQACEGLKHMHE 167
Query: 463 ELREDGIAHGNLKSNNILFNNNMEPC--ISEYGLIVTENHDQSFLAQTSSLKINDISNQM 520
I H ++K NI+ I ++GL N D+
Sbjct: 168 H----SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV-------------KVT 210
Query: 521 CST--------IKADVYGF-------GVILLELLTG 541
+T + + GF GV+ LL+G
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 24/132 (18%), Positives = 50/132 (37%), Gaps = 7/132 (5%)
Query: 76 RKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS 135
++ L + + +L L+L NI ++ L L + N
Sbjct: 174 MRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI--KDMPNLTPLVGLEELEMSGNHFP 231
Query: 136 GNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFS--- 191
P S L++LK+L + N+ S + ++ L+ +N L +P F+
Sbjct: 232 EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLR 290
Query: 192 NLLQFNVSNNNL 203
L++ ++ +N
Sbjct: 291 YLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 16/133 (12%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+ L+L ENNI + + L L +GRN + + + L +L L++ +N
Sbjct: 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135
Query: 159 SSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNV----SNNNLSGPVPGVNG 212
+ +P +S L + NN + IP + F+ + L
Sbjct: 136 TV-IPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLE-------- 185
Query: 213 RLGADSFSGNPGL 225
+ +F G L
Sbjct: 186 YISEGAFEGLFNL 198
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 9/119 (7%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+L L L N I S+ L HL + N LS L++L L++ N +
Sbjct: 77 NLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPY 136
Query: 159 SSELPDLSRISGLLT----FFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGV 210
+ L + S S L + I DF+ L L+ + ++L P
Sbjct: 137 KT-LGETSLFSHLTKLQILRVGNMDTFT-KIQRKDFAGLTFLEELEIDASDLQSYEPKS 193
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 4e-07
Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 12/117 (10%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN--------LPDSLSKLNNLK 149
Q++ L L + + + L + L +SL K +
Sbjct: 198 QNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFR 257
Query: 150 RLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDF---SNLLQFNVSNNNL 203
+ I++ + + L++ISGLL NQL+ +P+ F ++L + + N
Sbjct: 258 NVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 9e-05
Identities = 19/134 (14%), Positives = 46/134 (34%), Gaps = 9/134 (6%)
Query: 80 LDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNL 138
L G + +T+ L +L + + + ++ + L L + + L
Sbjct: 131 LLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYE 190
Query: 139 PDSLSKLNNLKRLDISNNNFSSELPD--LSRISGLLTFFAENNQLRG----GIPEFDFSN 192
P SL + N+ L + L + + S + + L + + ++
Sbjct: 191 PKSLKSIQNVSHLILHMKQHIL-LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNS 249
Query: 193 LLQ-FNVSNNNLSG 205
L++ F N ++
Sbjct: 250 LIKKFTFRNVKITD 263
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 16/133 (12%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+ +L+L EN I + + L L + RN + + + L NL L++ +N
Sbjct: 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124
Query: 159 SSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNV----SNNNLSGPVPGVNG 212
++ +P+ +S L + NN + IP + F+ + LS
Sbjct: 125 TT-IPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLS-------- 174
Query: 213 RLGADSFSGNPGL 225
+ +F G L
Sbjct: 175 YISEGAFEGLSNL 187
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 6e-07
Identities = 23/132 (17%), Positives = 50/132 (37%), Gaps = 7/132 (5%)
Query: 76 RKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS 135
R++ L + + +L L+L N+ ++ +L L + N LS
Sbjct: 163 RRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL--REIPNLTPLIKLDELDLSGNHLS 220
Query: 136 GNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFS--- 191
P S L +L++L + + + + L+ +N L +P F+
Sbjct: 221 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLH 279
Query: 192 NLLQFNVSNNNL 203
+L + ++ +N
Sbjct: 280 HLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 16/111 (14%), Positives = 40/111 (36%), Gaps = 3/111 (2%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
L L L N+++ L L++ ++++ ++ L +L +++++NN
Sbjct: 208 KLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 267
Query: 159 SSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPV 207
+ LP + + L +N S ++ +N
Sbjct: 268 TL-LPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIKDMAPSNTACCAR 317
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 2e-07
Identities = 39/226 (17%), Positives = 77/226 (34%), Gaps = 57/226 (25%)
Query: 352 ELLGRGKH--GSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK---HPNVLP 405
++G+G ++ G + V+R+ + S+E ++ K HPN++P
Sbjct: 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVP 90
Query: 406 PLAYYCS--KQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVA----KALA 458
Y + +L +V + GS +L+ G A + KAL
Sbjct: 91 ---YRATFIADNELWVVTSFMAYGSAKDLICTHFMD-----GMNELAIAYILQGVLKALD 142
Query: 459 LIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS--LKINDI 516
IH G H ++K+++IL + + + +S S + +
Sbjct: 143 YIHHM----GYVHRSVKASHILISVDGKVYLSGLR----------SNLSMISHGQRQRVV 188
Query: 517 SNQMCSTI--------------------KADVYGFGVILLELLTGK 542
+ ++ K+D+Y G+ EL G
Sbjct: 189 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH 234
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 50/293 (17%), Positives = 97/293 (33%), Gaps = 65/293 (22%)
Query: 352 ELLGRGKHGSLYRVVLDDG----LMLAVKRLRDWSISSE--DFKNRMQKIDHVKHPNVLP 405
++G+G G +Y D + A+K L + + F + + HPNVL
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 406 PLAYYCSKQE--KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
+ E ++ Y +G L + ++ + VA+ +
Sbjct: 87 LIG-IMLPPEGLPHVLLPYMCHGDLLQFIR--SPQRNPTVKDLISFGLQVARGMEY---- 139
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLI-VTENHDQSFLAQTSSLK---------- 512
L E H +L + N + + + ++++GL + + + Q +
Sbjct: 140 LAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199
Query: 513 INDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWTVEV 567
+ T K+DV+ FGV+L ELLT G + ++
Sbjct: 200 LQT----YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF------------------DL 237
Query: 568 FDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINNI 613
+ R+ + L QV +C P RP+ + + I
Sbjct: 238 THFLA-----QGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 51/272 (18%), Positives = 96/272 (35%), Gaps = 54/272 (19%)
Query: 296 NSNKRSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRAPAELLG 355
+ ++ R+ + + A ++T+ + F + + E+LG
Sbjct: 41 EVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKT--EILG 98
Query: 356 RGKHGSLYRVV-LDDGLMLAVK-----RLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAY 409
G+ G +++ GL LA K ++D E+ KN + ++ + H N++
Sbjct: 99 GGRFGQVHKCEETATGLKLAAKIIKTRGMKD----KEEVKNEISVMNQLDHANLIQLYDA 154
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAAC---VAKALALIHEELRE 466
+ SK + +LV EY G LF+ + + + + L + + + +H+
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRI--IDESYNL---TELDTILFMKQICEGIRHMHQM--- 206
Query: 467 DGIAHGNLKSNNILFNNNMEPCI--SEYGLIVTENHDQSFLAQTSSLKINDISNQMCST- 523
I H +LK NIL N I ++GL + T
Sbjct: 207 -YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL-------------KVNFGTP 252
Query: 524 -------IKADVYGF-------GVILLELLTG 541
+ D F GVI LL+G
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 33/219 (15%)
Query: 340 KLKFEDLLRAPAELLGRGKHGSLYRVVL---DDGLMLAVKRLRDWSI--SSEDFK---NR 391
LK ++LL A EL G G GS+ + V + +A+K L+ + +E+
Sbjct: 331 FLKRDNLLIADIEL-GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI 389
Query: 392 MQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAA 451
M ++D+ P ++ + C + +LV E G L L + + +
Sbjct: 390 MHQLDN---PYIVRLIGV-CQAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLH 443
Query: 452 CVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSL 511
V+ + L E H NL + N+L N IS++GL D S+ S+
Sbjct: 444 QVSMGMKY----LEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499
Query: 512 K----------INDISNQMCSTIKADVYGFGVILLELLT 540
K IN + ++DV+ +GV + E L+
Sbjct: 500 KWPLKWYAPECINFRK----FSSRSDVWSYGVTMWEALS 534
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 3e-07
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 16/133 (12%)
Query: 99 SLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+L L NN++ ++ + L L + N L+ ++ + NL+ LD+S+N+
Sbjct: 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99
Query: 158 FSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVNG 212
+ L + S + L NN + + F ++ LQ +S N +S
Sbjct: 100 LHT-LDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS-------- 149
Query: 213 RLGADSFSGNPGL 225
R + L
Sbjct: 150 RFPVELIKDGNKL 162
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 7/113 (6%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+L L L N++ S+ + L L + N + ++ + L++L +S N
Sbjct: 88 PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQ 147
Query: 158 FSSELP-----DLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205
S P D +++ L+ +N+L+ +P D L + + L
Sbjct: 148 ISR-FPVELIKDGNKLPKLMLLDLSSNKLK-KLPLTDLQKLPAWVKNGLYLHN 198
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 12/116 (10%)
Query: 99 SLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLP-DSLSKLNNLKRLDISNN 156
++ + + + + N ++TH+ + + + D+L +L LK L I N
Sbjct: 56 NISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT 115
Query: 157 NFSSELPDLSRISGLLTFF----AENNQLRGGIPEFDFSNL----LQFNVSNNNLS 204
PDL+++ FF +N + IP F L L + NN +
Sbjct: 116 GLKM-FPDLTKVYSTDIFFILEITDNPYMT-SIPVNAFQGLCNETLTLKLYNNGFT 169
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 4e-07
Identities = 57/273 (20%), Positives = 98/273 (35%), Gaps = 58/273 (21%)
Query: 298 NKRSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLR--APAELLG 355
+ S V +N S++SV + AA + ++ ++ + L LG
Sbjct: 3 HHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELG 62
Query: 356 RGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ 414
RG +YR A+K L+ ++ + + + + + HPN++ + +
Sbjct: 63 RGATSIVYRCKQKGTQKPYALKVLKK-TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPT 121
Query: 415 EKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK----ALALIHEELRE 466
E LV E G LF+ + + SE R AA K A+A +HE
Sbjct: 122 EISLVLELVTGGELFDRIVEKGYYSE-----------RDAADAVKQILEAVAYLHEN--- 167
Query: 467 DGIAHGNLKSNNILFNNNMEPC---ISEYGLIVTENHDQSFLAQTSSLKINDISNQMCST 523
GI H +LK N+L+ I+++GL H +C T
Sbjct: 168 -GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM-------------KTVCGT 213
Query: 524 I---------------KADVYGFGVILLELLTG 541
+ D++ G+I LL G
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 4e-07
Identities = 54/332 (16%), Positives = 115/332 (34%), Gaps = 79/332 (23%)
Query: 327 SSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS 385
+ KV +LK +D + LG G G +++V GL++A K + I
Sbjct: 16 RLEAFLTQKQKVGELKDDDFEKI--SELGAGNGGVVFKVSHKPSGLVMARKLIH-LEIKP 72
Query: 386 EDFKNRMQKIDHVK---HPNVLPPLAYYCS--KQEKL-LVYEYQPNGSLFNLLHGSENGQ 439
++++ + P ++ +Y + ++ + E+ GSL +L
Sbjct: 73 AIRNQIIRELQVLHECNSPYIV---GFYGAFYSDGEISICMEHMDGGSLDQVLK---KAG 126
Query: 440 SFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499
+V+ V K L + E+ + I H ++K +NIL N+ E + ++G+
Sbjct: 127 RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGV----- 178
Query: 500 HDQSFLAQTSSLKINDISN---------------QMCSTIKADVYGFGVILLELLTGK-- 542
S I+ ++N ++++D++ G+ L+E+ G+
Sbjct: 179 ---------SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
Query: 543 --------LVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVAL---- 590
L G + T ++ + +LL +
Sbjct: 230 IPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP 289
Query: 591 -----------------RCINQSPNERPSMNQ 605
+C+ ++P ER + Q
Sbjct: 290 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQ 321
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 51.3 bits (122), Expect = 5e-07
Identities = 25/113 (22%), Positives = 32/113 (28%), Gaps = 9/113 (7%)
Query: 121 CKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD--LSRISGLLTFFAEN 178
+ L R+ + L NL L I N L L + L
Sbjct: 7 PHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVK 65
Query: 179 NQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGV--NGRLGADSFSGNPGLC 226
+ LR + F L N+S N L L SGNP C
Sbjct: 66 SGLR-FVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHC 117
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 44.0 bits (103), Expect = 1e-04
Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 99 SLVVLSLEENNIAGTVSQE-ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+L L +E + + +L +L + ++ L PD+ L RL++S N
Sbjct: 32 NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91
Query: 158 FSSELPDLSRISGLLTFFAENNQLR 182
S + L N L
Sbjct: 92 LESLSWKTVQGLSLQELVLSGNPLH 116
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 6e-07
Identities = 29/133 (21%), Positives = 50/133 (37%), Gaps = 10/133 (7%)
Query: 102 VLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSE 161
+ LE+N I S K+L + + N++S PD+ L +L L + N +
Sbjct: 36 EIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE- 94
Query: 162 LPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQ---FNVSNNNLSGPVPGVNGRLGA 216
LP + L N++ + F +L ++ +N L G L A
Sbjct: 95 LPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 153
Query: 217 DSF---SGNPGLC 226
+ NP +C
Sbjct: 154 IQTMHLAQNPFIC 166
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 6e-07
Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 26/164 (15%)
Query: 335 SSKVNKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS-EDFKNRM 392
S+ +FED+ + ++LG G H + + L AVK + +
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 393 QKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRL 447
+ + + H NVL + ++ + LV+E GS+ + + H +E
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNE----------- 110
Query: 448 RVAACV----AKALALIHEELREDGIAHGNLKSNNILFNNNMEP 487
A+ V A AL +H + GIAH +LK NIL + +
Sbjct: 111 LEASVVVQDVASALDFLHNK----GIAHRDLKPENILCEHPNQV 150
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 6e-07
Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
E LG+G + R V GL A K + +S+ DF+ ++ ++HPN++
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 408 AYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK----ALAL 459
+ LV++ G LF + SE A+ + ++A
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-----------ADASHCIQQILESIAY 120
Query: 460 IHEELREDGIAHGNLKSNNILFNNNME 486
H GI H NLK N+L + +
Sbjct: 121 CHSN----GIVHRNLKPENLLLASKAK 143
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 7e-07
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK 133
+VR++VLD + + +L LSL + + +L L + N+
Sbjct: 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGL--ISVSNLPKLPKLKKLELSENR 82
Query: 134 LSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGL 171
+ G L KL NL L++S N ++ L + L
Sbjct: 83 IFGGLDMLAEKLPNLTHLNLSGNKL-KDISTLEPLKKL 119
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 4e-04
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 80 LDGFNLSG--ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN 137
L+ +L ++ +++ K L L L EN I G + LTHL + NKL +
Sbjct: 51 LEFLSLINVGLISVSNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK-D 109
Query: 138 LPD--SLSKLNNLKRLDISNN 156
+ L KL LK LD+ N
Sbjct: 110 ISTLEPLKKLECLKSLDLFNC 130
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 7e-07
Identities = 43/215 (20%), Positives = 74/215 (34%), Gaps = 46/215 (21%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRL--RDWSISSEDFKNRMQKIDHVKHPNVLPPLA 408
LG G G ++ V GL +K + + E + ++ + + HPN++
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 409 YYCSKQEKLLVYEYQPNGSLFN-LLHGSENGQSFDWGSRLRVAACVAK----ALALIHEE 463
+ +V E G L ++ G++ A + K ALA H +
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE----GYVAELMKQMMNALAYFHSQ 143
Query: 464 LREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQM 520
+ H +LK NILF + + I ++GL D+
Sbjct: 144 ----HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS-------------TNA 186
Query: 521 CST--------------IKADVYGFGVILLELLTG 541
T K D++ GV++ LLTG
Sbjct: 187 AGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTG 221
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 8e-07
Identities = 40/251 (15%), Positives = 75/251 (29%), Gaps = 67/251 (26%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLR------DWSISSEDFKNRMQKIDHVKHPNVL 404
+G+G +G + + + A+K + E K ++ + + HPN+
Sbjct: 32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRL----------------- 447
Y +Q LV E G L + L+ + + +
Sbjct: 92 RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 448 ----------------RVAACVAKALALIHEELREDGIAHGNLKSNNILF--NNNMEPCI 489
++ + + + + L GI H ++K N LF N + E +
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKL 211
Query: 490 SEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTI-----------------KADVYGFG 532
++GL S + T K D + G
Sbjct: 212 VDFGL--------SKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 533 VILLELLTGKL 543
V+L LL G +
Sbjct: 264 VLLHLLLMGAV 274
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 9e-07
Identities = 45/225 (20%), Positives = 82/225 (36%), Gaps = 58/225 (25%)
Query: 352 ELLGRGKHGSLYR---VVLDDGLMLAVKRLRDWSISSEDFKNRMQK----IDHVKHPNV- 403
E+LG G ++ + +AVK LR F R ++ + HP +
Sbjct: 18 EILGFGGMSEVHLARDLRDHR--DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 404 -----------LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAAC 452
PL Y +V EY +L +++H G + V A
Sbjct: 76 AVYDTGEAETPAGPLPY--------IVMEYVDGVTLRDIVH--TEGP-MTPKRAIEVIAD 124
Query: 453 VAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLK 512
+AL H+ GI H ++K NI+ + + ++G+ + + QT+++
Sbjct: 125 ACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV- 179
Query: 513 INDISNQMCS--------------TIKADVYGFGVILLELLTGKL 543
+ + ++DVY G +L E+LTG+
Sbjct: 180 -------IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 18/161 (11%)
Query: 59 CSGKWVGVTCDSRQ--------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNI 110
G C +R V + L +++ L+ TS + Q L L +E+
Sbjct: 10 VIGYNA--ICINRGLHQVPELPAHVNYVDLSLNSIA-ELNETSFSRLQDLQFLKVEQQTP 66
Query: 111 AGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF-SSELPD--LS 166
+ L L + N+ + + L NL+ L ++ N + L
Sbjct: 67 GLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFK 126
Query: 167 RISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNLS 204
++ L +N ++ P F N+ +++ N +
Sbjct: 127 PLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 1e-05
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 99 SLVVLSLEENNIAGTVSQEIS-----NCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153
L L+L +N I +I L L + +N L L+ L+ LD+
Sbjct: 300 DLEQLTLAQNEI-----NKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354
Query: 154 SNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNL 193
S N+ + L D + L + NQL+ +P+ F L
Sbjct: 355 SYNHIRA-LGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRL 394
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 33/174 (18%), Positives = 58/174 (33%), Gaps = 29/174 (16%)
Query: 71 RQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNC--------- 121
+ S+ + L G + + SL +N S
Sbjct: 210 KNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269
Query: 122 -----KQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD--LSRISGLLTF 174
+ + ++K+ L S +L++L ++ N + + D ++ LL
Sbjct: 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINK-IDDNAFWGLTHLLKL 328
Query: 175 FAENNQLRGGIPEFDFSNL--LQF-NVSNNNLSGPVPGVNGRLGADSFSGNPGL 225
N L G I F NL L+ ++S N++ LG SF G P L
Sbjct: 329 NLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIR--------ALGDQSFLGLPNL 373
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 45/216 (20%), Positives = 84/216 (38%), Gaps = 39/216 (18%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRL---RDWSISSEDFKNR----------MQKIDH 397
E+LGRG + R + AVK + S S+E+ + ++K+
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 398 VKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACV 453
HPN++ Y + LV++ G LF+ L SE + +
Sbjct: 83 --HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE-----------KETRKI 129
Query: 454 AKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS--- 510
+AL + L + I H +LK NIL +++M ++++G + + +
Sbjct: 130 MRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSY 189
Query: 511 -----LKINDISNQMCSTIKADVYGFGVILLELLTG 541
++ + N + D++ GVI+ LL G
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
E LG+G + R V GL A K + +S+ DF+ ++ ++HPN++
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 408 AYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK----ALAL 459
+ LV++ G LF + SE A+ + ++A
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-----------ADASHCIQQILESIAY 143
Query: 460 IHEELREDGIAHGNLKSNNILFNNNME 486
H GI H NLK N+L + +
Sbjct: 144 CHSN----GIVHRNLKPENLLLASKAK 166
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 10/119 (8%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSL-SKLNNLKRLDISNNN 157
S L L N + S + +L L + R ++ + D L++L L ++ N
Sbjct: 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNP 87
Query: 158 FSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNL--LQF-NVSNNNL-SGPVPGV 210
S L S +S L A L + F +L L+ NV++N + S +P
Sbjct: 88 IQS-LALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEY 144
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 12/122 (9%)
Query: 99 SLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
L L L N I +++ S L L L+ + L LK L++++N
Sbjct: 77 HLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 135
Query: 158 FSS-ELPDL-SRISGLLTFFAENNQLRGGIPEFDFSNL-------LQFNVSNNNLSGPVP 208
S +LP+ S ++ L +N+++ I D L L ++S N ++ P
Sbjct: 136 IQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQP 194
Query: 209 GV 210
G
Sbjct: 195 GA 196
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 55/277 (19%), Positives = 103/277 (37%), Gaps = 66/277 (23%)
Query: 300 RSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFED--LLRAPAELLGRG 357
++ + + ++ S + + + V + +++ + L+ LLG+G
Sbjct: 104 QTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLK----LLGKG 159
Query: 358 KHGSLYRVVL----DDGLMLAVKRLRDWSISSEDFKNRMQKIDH----------VKHPNV 403
G +V+L G A+K L+ I ++D ++ H +HP
Sbjct: 160 TFG---KVILVKEKATGRYYAMKILKKEVIVAKD------EVAHTLTENRVLQNSRHP-F 209
Query: 404 LPPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRV-AACVAKALALIH 461
L L Y ++L V EY G LF L + F R R A + AL +H
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHLS---RERVFS-EDRARFYGAEIVSALDYLH 265
Query: 462 EELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMC 521
E + + +LK N++ + + I+++GL E +K C
Sbjct: 266 SEK---NVVYRDLKLENLMLDKDGHIKITDFGL-CKEG-----------IKDGATMKTFC 310
Query: 522 STIK---------------ADVYGFGVILLELLTGKL 543
T + D +G GV++ E++ G+L
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 347
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 32/205 (15%)
Query: 354 LGRGKHGSLYRVVL---DDGLMLAVKRLRDWSI--SSEDFK---NRMQKIDHVKHPNVLP 405
LG G GS+ + V + +A+K L+ + +E+ M ++D+ P ++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN---PYIVR 74
Query: 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
+ C + +LV E G L L + + + V+ + L
Sbjct: 75 LIGV-CQAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKY----LE 127
Query: 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLI-VTENHDQSFLAQTSS---LK------IND 515
E H +L + N+L N IS++GL D + A+++ LK IN
Sbjct: 128 EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF 187
Query: 516 ISNQMCSTIKADVYGFGVILLELLT 540
+ ++DV+ +GV + E L+
Sbjct: 188 ----RKFSSRSDVWSYGVTMWEALS 208
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 43/219 (19%), Positives = 77/219 (35%), Gaps = 48/219 (21%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLR------DWSISSEDFKNRMQKIDHVKHPNVL 404
E++G+G + R + + G AVK + +S+ED K +KHP+++
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAK----ALALI 460
L Y S +V+E+ L + + + S VA+ + AL
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSE-AVASHYMRQILEALRYC 146
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPC---ISEYGLIVTENHDQSFLAQTSSLKINDIS 517
H+ I H ++K + +L + + +G+ +
Sbjct: 147 HDN----NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA------------ 190
Query: 518 NQMCST--------IKADVYGF-------GVILLELLTG 541
T +K + YG GVIL LL+G
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-06
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
V+++VLD + + + L LS + +++ + +L L + N
Sbjct: 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SIAN-LPKLNKLKKLELSDN 74
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSS--ELPDLSRISGLLTFFAENN 179
++SG L K NL L++S N + L ++ L + N
Sbjct: 75 RVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 56/313 (17%), Positives = 115/313 (36%), Gaps = 74/313 (23%)
Query: 352 ELLGRGKHGSLYRVVLDDG----LMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVL 404
+LG+G+ GS+ L + +AVK L+ I+S E+F + HP+V
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 405 PPLAYYCSKQE-------KLLVYEYQPNGSLFNLLHGS---ENGQSFDWGSRLRVAACVA 454
+ + +++ + +G L L S EN + + +R +A
Sbjct: 89 KLVG-VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIA 147
Query: 455 KALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTS----- 509
+ L H +L + N + +M C++++GL + +
Sbjct: 148 CGMEY----LSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPV 203
Query: 510 ------SLKINDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSV 558
SL N T+ +DV+ FGV + E++T G+ ++N
Sbjct: 204 KWLALESLADN------LYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA----------- 246
Query: 559 VREEWTVEVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMIN 611
E+++ ++ R+ + + + +C + P +RPS + + +
Sbjct: 247 -------EIYNYLI-----GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294
Query: 612 NIKEEEERSISSE 624
NI +S+
Sbjct: 295 NILGHLSVLSTSQ 307
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 34/206 (16%)
Query: 354 LGRGKHGSLYRVVL---DDGLMLAVKRLRDWSIS---SEDFK---NRMQKIDHVKHPNVL 404
LG G G++ + +AVK L++ + ++ N MQ++D+ P ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN---PYIV 81
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
+ C + +LV E G L L + + + + V+ + L
Sbjct: 82 RMIGI-CEAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKY----L 133
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLK----------IN 514
E H +L + N+L IS++GL D+++ + K IN
Sbjct: 134 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 515 DISNQMCSTIKADVYGFGVILLELLT 540
+ K+DV+ FGV++ E +
Sbjct: 194 Y----YKFSSKSDVWSFGVLMWEAFS 215
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 2e-06
Identities = 54/297 (18%), Positives = 109/297 (36%), Gaps = 68/297 (22%)
Query: 352 ELLGRGKHGSLYRVVLDDG----LMLAVKRLRDWSISSE--DFKNRMQKIDHVKHPNVLP 405
+G G+ G +++ + + +A+K ++ + S F + HP+++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
+ ++ ++ E G L + L S D S + A ++ ALA L
Sbjct: 456 LIGV-ITENPVWIIMELCTLGELRSFLQ--VRKFSLDLASLILYAYQLSTALAY----LE 508
Query: 466 EDGIAHGNLKSNNILFNNNMEPCISEYGL---IVTENHDQSFLAQTSSL---------KI 513
H ++ + N+L ++N + ++GL + D ++ + I
Sbjct: 509 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM----EDSTYYKASKGKLPIKWMAPESI 564
Query: 514 NDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWTVEVF 568
N T +DV+ FGV + E+L G V+NN +V
Sbjct: 565 NFRR----FTSASDVWMFGVCMWEILMHGVKPFQGVKNN------------------DVI 602
Query: 569 DEVLIAEAASEERM-------LKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618
+ + ER+ L + +C P+ RP ++ ++ I EEE+
Sbjct: 603 GRI-----ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 654
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 63/295 (21%), Positives = 105/295 (35%), Gaps = 69/295 (23%)
Query: 352 ELLGRGKHGSLYRVVLDDG----LMLAVKRLRDWSISSE--DFKNRMQKIDHVKHPNVLP 405
E++GRG G +Y L D + AVK L + E F + HPNVL
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 406 PLAYYCSKQEK--LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
L C + E L+V Y +G L N + + + VAK +
Sbjct: 91 LLG-ICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKY---- 143
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGL---IVTENHDQSFLAQTSSLK-------- 512
L H +L + N + + ++++GL + + + + K
Sbjct: 144 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTGAKLPVKWMAL 201
Query: 513 --INDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVVREEWTV 565
+ T K+DV+ FGV+L EL+T G V
Sbjct: 202 ESLQT----QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------------------ 239
Query: 566 EVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINNI 613
++ +L R+L+ L +V L+C + RPS +++ I+ I
Sbjct: 240 DITVYLL-----QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 49.4 bits (117), Expect = 3e-06
Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 5/86 (5%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+ L L N + + ++ + L L N L N+ ++ L L+ L + NN
Sbjct: 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG-VANLPRLQELLLCNNR 519
Query: 158 FSS--ELPDLSRISGLLTFFAENNQL 181
+ L L+ + N L
Sbjct: 520 LQQSAAIQPLVSCPRLVLLNLQGNSL 545
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 5e-06
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPD--SLSKLNNLKRLDISN 155
+ L VL +N + ++N +L L + N+L L L L++
Sbjct: 486 RCLEVLQASDNAL--ENVDGVANLPRLQELLLCNNRLQ-QSAAIQPLVSCPRLVLLNLQG 542
Query: 156 NNFSSELPDLSRISGLL 172
N+ E R++ +L
Sbjct: 543 NSLCQEEGIQERLAEML 559
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 1e-04
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Query: 117 EISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFA 176
+ L++ L+ + L +L + LD+S+N + P L+ + L A
Sbjct: 436 LKMEYADVRVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQA 493
Query: 177 ENNQLRGGIPEFDF-SNLLQFNVSNNNLS 204
+N L + L + + NN L
Sbjct: 494 SDNALE-NVDGVANLPRLQELLLCNNRLQ 521
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 3e-06
Identities = 41/217 (18%), Positives = 72/217 (33%), Gaps = 55/217 (25%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS-EDFKNRMQKIDHVKHPNVLPPLAY 409
+GRG G + V + A K++ + + + FK ++ + + HPN++
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 410 YCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK----ALALIH 461
+ + LV E G LF + E AA + K A+A H
Sbjct: 75 FEDNTDIYLVMELCTGGELFERVVHKRVFRE-----------SDAARIMKDVLSAVAYCH 123
Query: 462 EELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENHDQSFLAQTSSLKINDISN 518
+ +AH +LK N LF + + ++GL +
Sbjct: 124 KL----NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM-------------R 166
Query: 519 QMCST--------------IKADVYGFGVILLELLTG 541
T + D + GV++ LL G
Sbjct: 167 TKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCG 203
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 60/223 (26%)
Query: 352 ELLGRGKHGSLYR---VVLDDGLMLAVKRLRDWSISSEDFKNRMQK----IDHVKHPNVL 404
+ LG G ++Y +L+ +A+K + E+ R ++ + H N++
Sbjct: 17 DKLGGGGMSTVYLAEDTILNI--KVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 405 P--------PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKA 456
Y LV EY +L + +G + + +
Sbjct: 75 SMIDVDEEDDCYY--------LVMEYIEGPTLSEYIE--SHGP-LSVDTAINFTNQILDG 123
Query: 457 LALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKIN 514
+ H+ I H ++K NIL ++N I ++G+ ++E L QT+ +
Sbjct: 124 IKHAHDM----RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS----LTQTNHV--- 172
Query: 515 DISNQMCS--------------TIKADVYGFGVILLELLTGKL 543
+ + D+Y G++L E+L G+
Sbjct: 173 -----LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEP 210
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 54/322 (16%), Positives = 112/322 (34%), Gaps = 107/322 (33%)
Query: 352 ELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSI--SSEDFK---NRMQKIDHVKHPN 402
+LG G G +Y V + + +AVK + + E F M+ +DH P+
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH---PH 74
Query: 403 VLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALA---- 458
++ + ++ ++ E P G L + L N S + + + + KA+A
Sbjct: 75 IVKLIGI-IEEEPTWIIMELYPYGELGHYLE--RNKNSLKVLTLVLYSLQICKAMAYLES 131
Query: 459 --LIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTEN--------------- 499
+H ++ NIL + + ++GL + +
Sbjct: 132 INCVHRDIA----------VRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 181
Query: 500 -----HDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGF 549
+ + F T +DV+ F V + E+L+ GK ++N
Sbjct: 182 SPESINFRRF------------------TTASDVWMFAVCMWEILSFGKQPFFWLENK-- 221
Query: 550 NLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPS 602
+V + +R+ K L + RC + P++RP
Sbjct: 222 ----------------DVIGVL-----EKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPR 260
Query: 603 MNQVAVMINNIKEEEERSISSE 624
++ ++++ + E+ I+ E
Sbjct: 261 FTELVCSLSDVY-QMEKDIAME 281
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 46/225 (20%), Positives = 75/225 (33%), Gaps = 71/225 (31%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRL-RDWSISSEDFKNRMQKIDHVKHPNVLPPLAY 409
E+LG G ++ V G + A+K + + + +N + + +KH N++
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 410 YCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK----ALALIH 461
Y S LV + G LF+ + +E + A+ V + A+ +H
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTE-----------KDASLVIQQVLSAVKYLH 123
Query: 462 EELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIND------ 515
E GI H +LK N+L+ E S + I D
Sbjct: 124 EN----GIVHRDLKPENLLYLTPEE---------------------NSKIMITDFGLSKM 158
Query: 516 ISNQMCSTI-------------------KADVYGFGVILLELLTG 541
N + ST D + GVI LL G
Sbjct: 159 EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 4e-06
Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 5/100 (5%)
Query: 72 QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGR 131
R++ L G+ + I + + + +N I ++L L V
Sbjct: 18 AVRDRELDLRGYKIPVIENLGATLD--QFDAIDFSDNEI--RKLDGFPLLRRLKTLLVNN 73
Query: 132 NKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGL 171
N++ L +L L ++NN+ EL DL ++ L
Sbjct: 74 NRICRIGEGLDQALPDLTELILTNNSL-VELGDLDPLASL 112
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 3e-05
Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 10/107 (9%)
Query: 102 VLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS--GNLPDSLSKLNNLKRLDISNNNFS 159
++ L I + + +N + L + K+ NL +L +D S+N
Sbjct: 1 MVKLTAELI--EQAAQYTNAVRDRELDLRGYKIPVIENLGATLD---QFDAIDFSDNEIR 55
Query: 160 SELPDLSRISGLLTFFAENNQLR--GGIPEFDFSNLLQFNVSNNNLS 204
L + L T NN++ G + +L + ++NN+L
Sbjct: 56 K-LDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 6e-06
Identities = 58/311 (18%), Positives = 105/311 (33%), Gaps = 82/311 (26%)
Query: 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSE--DFK---NRMQKIDHVKHPNVLP 405
A+ G K + V AVK L++ + SE + I H NV+
Sbjct: 46 ADAFGIDKTATCRTV--------AVKMLKEGATHSEHRALMSELKILIHIG--HHLNVVN 95
Query: 406 PLAYYCSKQEK--LLVYEYQPNGSLFNLLHGSENGQSFDWGSR-------------LRVA 450
L C+K +++ E+ G+L L N + + +
Sbjct: 96 LLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 451 ACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS 510
VAK + L H +L + NIL + I ++GL D ++ + +
Sbjct: 155 FQVAKGMEF----LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 511 L---------KINDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVH 556
I D TI++DV+ FGV+L E+ + G V+ +
Sbjct: 211 RLPLKWMAPETIFD----RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------- 257
Query: 557 SVVREEWTVEVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVM 609
E + RM + Q L C + P++RP+ +++
Sbjct: 258 --------EEFCRRLK-----EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
Query: 610 INNIKEEEERS 620
+ N+ + +
Sbjct: 305 LGNLLQANAQQ 315
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 7e-06
Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 66/226 (29%)
Query: 352 ELLGRG--------KHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRM----QKIDHVK 399
L+GRG + R+V A+K + + S F+ RM + ++
Sbjct: 40 RLVGRGGMGDVYEAEDTVRERIV-------ALKLMSETLSSDPVFRTRMQREARTAGRLQ 92
Query: 400 HPNVLP--------PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAA 451
P+V+P Y + L +L G + +
Sbjct: 93 EPHVVPIHDFGEIDGQLY--------VDMRLINGVDLAAMLR--RQG-PLAPPRAVAIVR 141
Query: 452 CVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSL 511
+ AL H G H ++K NIL + + + ++G+ L Q +
Sbjct: 142 QIGSALDAAHA----AGATHRDVKPENILVSADDFAYLVDFGIASAT--TDEKLTQLGNT 195
Query: 512 KINDISNQMCS--------------TIKADVYGFGVILLELLTGKL 543
+ + T +AD+Y +L E LTG
Sbjct: 196 --------VGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSP 233
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 7e-06
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 18/113 (15%)
Query: 99 SLVVLSLEENNIAGTVSQEIS-----NCKQLTHLYVGRNKLSGNLPDSL-SKLNNLKRLD 152
+L VL + N + + +L LY+ N+L LP L + L++L
Sbjct: 101 ALTVLDVSFNRL-----TSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLS 154
Query: 153 ISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNN 201
++NNN + LP L+ + L T + N L IP+ F L + N
Sbjct: 155 LANNNLTE-LPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 6e-05
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 8/116 (6%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+L L EN + + +LT L + R +L+ L L L LD+S+N
Sbjct: 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLSHNQL 89
Query: 159 SSELPDL-SRISGLLTFFAENNQLRGGIPE--FD-FSNLLQFNVSNNNLSGPVPGV 210
S LP L + L N+L +P L + + N L PG+
Sbjct: 90 QS-LPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGL 143
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 7e-06
Identities = 43/298 (14%), Positives = 80/298 (26%), Gaps = 93/298 (31%)
Query: 352 ELLGRGKHGSLYR---VVLDDGLMLAVKRLRDWSISSEDFKNRMQK-------------- 394
+ G G +Y ++ G + +K L + +
Sbjct: 86 GCIAHGGLGWIYLALDRNVN-GRPVVLKGLVH--SGDAEAQAMAMAERQFLAEVVHPSIV 142
Query: 395 --IDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAAC 452
+ V+H + Y +V EY SL +
Sbjct: 143 QIFNFVEHTDRHGDPVGY-------IVMEYVGGQSLKRSKGQK-----LPVAEAIAYLLE 190
Query: 453 VAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF-----LAQ 507
+ AL+ +H G+ + +LK NI+ ++E L + D +
Sbjct: 191 ILPALSYLHSI----GLVYNDLKPENIM--------LTEEQLKLI---D--LGAVSRINS 233
Query: 508 TSSLKINDISNQMCS-------------TIKADVYGFGVILLELLTGKLVQNNGFNLATW 554
L + T+ D+Y G L L N +
Sbjct: 234 FGYL--------YGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLP----TRN-GRY 280
Query: 555 VHSVVREEWTVEVFDEV--LIAEA---------ASEERMLKLLQVALRCINQSPNERP 601
V + ++ ++ +D L+ A + E M L LR + P
Sbjct: 281 VDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVP 338
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 8e-06
Identities = 39/209 (18%), Positives = 83/209 (39%), Gaps = 31/209 (14%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID----HVKHPNVLPP 406
+G G G ++++ G ++AVK++R S + E+ K + +D P ++
Sbjct: 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMR-RSGNKEENKRILMDLDVVLKSHDCPYIV-- 87
Query: 407 LAYYCS--KQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
+ + + + E L ++ + KAL + E+
Sbjct: 88 -QCFGTFITNTDVFIAMELM-GTCAEKLK--KRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSL---------KIN 514
G+ H ++K +NIL + + + ++G ++ A+ S +I+
Sbjct: 144 H---GVIHRDVKPSNILLDERGQIKLCDFG--ISGRLVDD-KAKDRSAGCAAYMAPERID 197
Query: 515 -DISNQMCSTIKADVYGFGVILLELLTGK 542
+ I+ADV+ G+ L+EL TG+
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQ 226
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 9e-06
Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
E LG+G + R V + G A + +S+ D + ++ +KHPN++
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 408 AYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK----ALAL 459
+ L+++ G LF + + SE A+ + A+
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSE-----------ADASHCIQQILEAVLH 125
Query: 460 IHEELREDGIAHGNLKSNNILFNNNME 486
H+ G+ H NLK N+L + ++
Sbjct: 126 CHQM----GVVHRNLKPENLLLASKLK 148
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 64/326 (19%), Positives = 131/326 (40%), Gaps = 81/326 (24%)
Query: 339 NKLKFEDLLRAPAELLGRGKHGSLYRVVLDDG---LMLAVKRLRDWSISSE--DFK---N 390
N +KF+ +++G G G + + + + A+KR+++++ + DF
Sbjct: 25 NDIKFQ-------DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE 77
Query: 391 RMQKIDHVKHPNVLPPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRV 449
+ K+ H HPN++ L C + L L EY P+G+L + L S ++ +
Sbjct: 78 VLCKLGH--HPNIINLLGA-CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 134
Query: 450 AACVAKALALIH---------EELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500
A + L+H + L + H +L + NIL N I+++GL +
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL----SR 190
Query: 501 DQSFLAQTSSLK----------INDISNQMCSTIKADVYGFGVILLELLT-GKL----VQ 545
Q + + + +N + T +DV+ +GV+L E+++ G +
Sbjct: 191 GQEVYVKKTMGRLPVRWMAIESLNY---SVY-TTNSDVWSYGVLLWEIVSLGGTPYCGMT 246
Query: 546 NNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK-------LLQVALRCINQSPN 598
E+++++ R+ K + + +C + P
Sbjct: 247 CA------------------ELYEKLP-----QGYRLEKPLNCDDEVYDLMRQCWREKPY 283
Query: 599 ERPSMNQVAVMINNIKEEEERSISSE 624
ERPS Q+ V +N + EE + +++
Sbjct: 284 ERPSFAQILVSLNRMLEERKTYVNTT 309
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158
+ L+L NNI +S + L L +GRN + + + + + L+ L IS N
Sbjct: 49 ACKHLALSTNNI--EKISSLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQI 105
Query: 159 SSELPDLSRISGLLTFFAENNQL 181
+S L + ++ L + NN++
Sbjct: 106 AS-LSGIEKLVNLRVLYMSNNKI 127
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 4e-05
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
++L +LSL N I + + L L++ N+++ +L + KL NL+ L +SNN
Sbjct: 70 ENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SL-SGIEKLVNLRVLYMSNNK 126
Query: 158 FSS--ELPDLSRISGLLTFFAENNQL 181
++ E+ L+ + L N L
Sbjct: 127 ITNWGEIDKLAALDKLEDLLLAGNPL 152
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 7/116 (6%)
Query: 91 TTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKR 150
+ V V L I + +S K HL + N + + SLS + NL+
Sbjct: 18 KSVVATEAEKVELHGMIPPIEK-MDATLSTLKACKHLALSTNNIE-KI-SSLSGMENLRI 74
Query: 151 LDISNNNFSSELPDLSRISGLL-TFFAENNQLRGGIPEFD-FSNLLQFNVSNNNLS 204
L + N ++ +L ++ L + NQ+ + + NL +SNN ++
Sbjct: 75 LSLGRNLI-KKIENLDAVADTLEELWISYNQIA-SLSGIEKLVNLRVLYMSNNKIT 128
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 43/219 (19%), Positives = 74/219 (33%), Gaps = 59/219 (26%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDH-VKHPNVLPPLAY 409
E +G G + R + + AVK + S D ++ + +HPN++
Sbjct: 28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDK---SKRDPTEEIEILLRYGQHPNIITLKDV 84
Query: 410 YCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACV----AKALALIH 461
Y + +V E G L + + SE R A+ V K + +H
Sbjct: 85 YDDGKYVYVVTELMKGGELLDKILRQKFFSE-----------REASAVLFTITKTVEYLH 133
Query: 462 EELREDGIAHGNLKSNNILFNNNMEPC----ISEYGLIVTENHDQSFLAQTSSLKINDIS 517
+ G+ H +LK +NIL+ + I ++G + L
Sbjct: 134 AQ----GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL------------ 177
Query: 518 NQMCST--------IKADVYG-------FGVILLELLTG 541
C T ++ Y GV+L +LTG
Sbjct: 178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 20/85 (23%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 97 TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156
+S++VL+L N + G+V + + ++ L + N++ ++P ++ L L+ L++++N
Sbjct: 427 AESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASN 483
Query: 157 NFSSELPD--LSRISGLLTFFAENN 179
S +PD R++ L + +N
Sbjct: 484 QLKS-VPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 2e-05
Identities = 16/115 (13%), Positives = 42/115 (36%), Gaps = 8/115 (6%)
Query: 100 LVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFS 159
+ + L ++ + T L +N + ++ S L L+ L + N
Sbjct: 331 MNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK 390
Query: 160 SELPDLSRISGLLTFFAENNQLRGGIPEFDF-------SNLLQFNVSNNNLSGPV 207
+ ++ ++ ++ + + + ++L N+S+N L+G V
Sbjct: 391 N-FFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV 444
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 3e-05
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 99 SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLP---DSLSKLNNLKRLDISN 155
S L+ +N +V Q S K+L L + RN L N +++L+ LD+S
Sbjct: 354 SFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSL 412
Query: 156 NNFSSELPDL--SRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
N+ +S D + +L +N L G + + ++ NN +
Sbjct: 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM 463
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 7e-05
Identities = 22/107 (20%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 102 VLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSL-SKLNNLKRLDISNNNFSS 160
LSL +N+I+ +IS +L L + N++ +L + +L+ LD+S+N +
Sbjct: 56 ALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSHNRLQN 114
Query: 161 ELPDLSRISGLLTFFAENNQLR--GGIPEFD-FSNLLQFNVSNNNLS 204
+ ++ L N EF + L +S
Sbjct: 115 -ISC-CPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFR 159
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 25/138 (18%)
Query: 59 CSGKWVGVTCDSRQ-KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQE 117
C V C ++ K + GI + L L+ N V +E
Sbjct: 10 CLDT--VVRCSNKGLKVLP---------KGIPRDVTE--------LYLDGNQFT-LVPKE 49
Query: 118 ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD--LSRISGLLTFF 175
+SN K LT + + N++S S S + L L +S N +P + L
Sbjct: 50 LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC-IPPRTFDGLKSLRLLS 108
Query: 176 AENNQLRGGIPEFDFSNL 193
N + +PE F++L
Sbjct: 109 LHGNDIS-VVPEGAFNDL 125
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 48/241 (19%), Positives = 75/241 (31%), Gaps = 83/241 (34%)
Query: 343 FEDL--LRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID--- 396
F L + LG G + V AVK IS N ++I
Sbjct: 6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVK-----IISKRMEANTQKEITALK 60
Query: 397 HVK-HPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAA 451
+ HPN++ + + LV E G LF + H SE A+
Sbjct: 61 LCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSE-----------TEAS 109
Query: 452 CVAK----ALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQ 507
+ + A++ +H+ G+ H +LK N+LF + +
Sbjct: 110 YIMRKLVSAVSHMHDV----GVVHRDLKPENLLFTDEND--------------------- 144
Query: 508 TSSLKIND--------ISNQMCSTI-------------------KADVYGFGVILLELLT 540
+KI D NQ T D++ GVIL +L+
Sbjct: 145 NLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLS 204
Query: 541 G 541
G
Sbjct: 205 G 205
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 44/252 (17%), Positives = 78/252 (30%), Gaps = 73/252 (28%)
Query: 327 SSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS 385
S V+ + K D + ++LG G +G + G A+K L D S
Sbjct: 10 SGLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD----S 65
Query: 386 EDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEK----LLVYEYQPNGSLFN------LLHG 434
+ + P+++ L Y + L++ E G LF+
Sbjct: 66 PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAF 125
Query: 435 SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL 494
+E R AA + + + + L IAH ++K N+L+ + +
Sbjct: 126 TE-----------REAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEK-------- 166
Query: 495 IVTENHDQSFLAQTSSLKIND------ISNQMCSTI-------------------KADVY 529
+ LK+ D + T D++
Sbjct: 167 -------------DAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 213
Query: 530 GFGVILLELLTG 541
GVI+ LL G
Sbjct: 214 SLGVIMYILLCG 225
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 51/276 (18%), Positives = 95/276 (34%), Gaps = 44/276 (15%)
Query: 295 INSNKRSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLRA--PAE 352
I S + S + + + + + + ++ + P +
Sbjct: 41 IRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKD 100
Query: 353 LLGRGKHGSLYRVV-LDDGLMLAVK-----RLRDWSISSEDFKNRMQK-ID---HVK-HP 401
++GRG + R V G AVK R E+ + ++ V HP
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 402 NVLPPLAYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK-- 455
+++ + Y S LV++ G LF+ L SE + + +
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE-----------KETRSIMRSL 209
Query: 456 --ALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS--- 510
A++ +H I H +LK NIL ++NM+ +S++G + +
Sbjct: 210 LEAVSFLHAN----NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGY 265
Query: 511 -----LKINDISNQMCSTIKADVYGFGVILLELLTG 541
LK + + D++ GVIL LL G
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 3e-05
Identities = 44/234 (18%), Positives = 78/234 (33%), Gaps = 54/234 (23%)
Query: 335 SSKVNKLKFEDLLRAPAELLGRGKHGSLYRV-VLDDGLMLAVKRLRDWSISSEDF----- 388
+ + F + R ++GRG G +Y D G M A+K L I +
Sbjct: 183 NIHLTMNDFS-VHR----IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL 237
Query: 389 --KNRMQKIDHVKHPNVLPPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGS 445
+ + + P ++ ++Y +KL + + G L L F +
Sbjct: 238 NERIMLSLVSTGDCPFIVC-MSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFS-EA 292
Query: 446 RLRV-AACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF 504
+R AA + L +H + + +LK NIL + + IS+ GL + +
Sbjct: 293 DMRFYAAEIILGLEHMHNR----FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 347
Query: 505 LAQTSSLKINDISNQMCSTI----------------KADVYGFGVILLELLTGK 542
+ T AD + G +L +LL G
Sbjct: 348 -------------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 58/306 (18%), Positives = 109/306 (35%), Gaps = 73/306 (23%)
Query: 352 ELLGRGKHGSLYRVVLDDG----LMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVL 404
++LG G+ GS+ L L +AVK ++ + S E+F + + HPNV+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 405 PPLAYYCSKQE------KLLVYEYQPNGSLFNLLHGS---ENGQSFDWGSRLRVAACVAK 455
L C + +++ + G L L S + + L+ +A
Sbjct: 100 RLLG-VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 456 ALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTS------ 509
+ L H +L + N + ++M C++++GL +
Sbjct: 159 GMEY----LSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 510 -----SLKINDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVV 559
SL T K+DV+ FGV + E+ T G VQN+
Sbjct: 215 WIAIESLADRVY------TSKSDVWAFGVTMWEIATRGMTPYPGVQNH------------ 256
Query: 560 REEWTVEVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINN 612
E++D +L R+ + L ++ C P +RP+ + + + +
Sbjct: 257 ------EMYDYLL-----HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305
Query: 613 IKEEEE 618
+ E
Sbjct: 306 LLESLP 311
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK---HPNVLPPL 407
LG G G +Y+ + G + A K + + S E+ ++ + +I+ + HP ++
Sbjct: 25 GELGDGAFGKVYKAKNKETGALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYIV--- 79
Query: 408 AYYCS--KQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKAL-ALIHEE 463
+ KL ++ E+ P G++ ++ + G + + + L AL
Sbjct: 80 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ-----IQVVCRQMLEALNF-- 132
Query: 464 LREDGIAHGNLKSNNILFNNN 484
L I H +LK+ N+L
Sbjct: 133 LHSKRIIHRDLKAGNVLMTLE 153
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 6e-05
Identities = 51/240 (21%), Positives = 78/240 (32%), Gaps = 63/240 (26%)
Query: 333 LTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRV-VLDDGLMLAVKRLRDWSISSEDFKNR 391
L V K F R +LG+G G + V G M A K+L K R
Sbjct: 176 LERQPVTKNTFR-QYR----VLGKGGFGEVCACQVRATGKMYACKKLE---------KKR 221
Query: 392 MQKIDHVKHP----NVLP--------PLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENG 438
++K +L LAY ++ L LV G L ++
Sbjct: 222 IKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQ 280
Query: 439 QSFDWGSRLRV-AACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497
F +R AA + L +H E I + +LK NIL +++ IS+ GL V
Sbjct: 281 AGFP-EARAVFYAAEICCGLEDLHRE----RIVYRDLKPENILLDDHGHIRISDLGLAV- 334
Query: 498 ENHDQSFLAQTSSLKINDISNQMCSTIK---------------ADVYGFGVILLELLTGK 542
+ T+ D + G +L E++ G+
Sbjct: 335 HVPE------------GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 8e-05
Identities = 56/307 (18%), Positives = 105/307 (34%), Gaps = 79/307 (25%)
Query: 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSE--DFK---NRMQKIDHVKHPNVLP 405
A G GK ++ +V AVK L+ + + E M + H N++
Sbjct: 65 ATAFGLGKEDAVLKV--------AVKMLKSTAHADEKEALMSELKIMSHLGQ--HENIVN 114
Query: 406 PLAYYCSKQEKLLV-YEYQPNGSLFNLLHGSENGQSFDWGSR-----------LRVAACV 453
L C+ +LV EY G L N L D L ++ V
Sbjct: 115 LLGA-CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 454 AKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLK- 512
A+ +A L H ++ + N+L N I ++GL +D +++ + ++
Sbjct: 174 AQGMAF----LASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 513 --------INDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLATWVHSVV 559
I D T+++DV+ +G++L E+ + G + N
Sbjct: 230 VKWMAPESIFD----CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN------------ 273
Query: 560 REEWTVEVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQVAVMINN 612
+ + V +M + + + C P RP+ Q+ +
Sbjct: 274 -----SKFYKLVK-----DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
Query: 613 IKEEEER 619
+E+ R
Sbjct: 324 QAQEDRR 330
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 9e-05
Identities = 30/176 (17%), Positives = 65/176 (36%), Gaps = 27/176 (15%)
Query: 323 SGAASSSLVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDW 381
V + ++ K D + +++LG G +G + ++ A+K L+D
Sbjct: 39 PPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD- 97
Query: 382 SISSEDFKNRMQKIDHV-KHPNVLPPLAYY----CSKQEKLLVYEYQPNGSLF------N 430
+ ++ + P+++ + Y ++ L+V E G LF
Sbjct: 98 ---CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRG 154
Query: 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME 486
+E R A+ + K++ + L IAH ++K N+L+ +
Sbjct: 155 DQAFTE-----------REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 199
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 9e-05
Identities = 46/261 (17%), Positives = 89/261 (34%), Gaps = 70/261 (26%)
Query: 314 SEYSITSVDSGAASSSLVVLTSSKVNKLKFED--LLRAPAELLGRGKHGSLYRVVL---- 367
+ S+ + A L + N + + ++ LG G G RV+L
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTGSFG---RVMLVKHK 63
Query: 368 DDGLMLAVKRLRDWSISSEDFKNRMQKIDH----------VKHPNVLPPLAYYCSKQEKL 417
+ G A+K L + ++++I+H V P ++ L + L
Sbjct: 64 ESGNHYAMKILDKQKVV------KLKQIEHTLNEKRILQAVNFPFLVK-LEFSFKDNSNL 116
Query: 418 -LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRV-AACVAKALALIHEELREDGIAHGNLK 475
+V EY G +F+ L F R AA + +H + + +LK
Sbjct: 117 YMVMEYVAGGEMFSHL---RRIGRFS-EPHARFYAAQIVLTFEYLHSL----DLIYRDLK 168
Query: 476 SNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTI----------- 524
N+L + ++++G + ++ + +C T
Sbjct: 169 PENLLIDQQGYIQVTDFGF---------------AKRVKGRTWTLCGTPEALAPEIILSK 213
Query: 525 ---KA-DVYGFGVILLELLTG 541
KA D + GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 31/153 (20%), Positives = 68/153 (44%), Gaps = 37/153 (24%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK----HPNVLPP 406
EL+G G +G +Y+ + G + A+K + ++ ++ + Q+I+ +K H N+
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVM---DVTGDEEEEIKQEINMLKKYSHHRNIA-- 84
Query: 407 LAYYCS--------KQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLR------VAA 451
YY + ++L LV E+ GS+ +L+ ++ L+ +
Sbjct: 85 -TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN-------TLKEEWIAYICR 136
Query: 452 CVAKALALIHEELREDGIAHGNLKSNNILFNNN 484
+ + L+ +H+ + H ++K N+L N
Sbjct: 137 EILRGLSHLHQH----KVIHRDIKGQNVLLTEN 165
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 15/109 (13%), Positives = 38/109 (34%), Gaps = 8/109 (7%)
Query: 102 VLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSS 160
L L N + I QL + NK++ + + + + +++N +
Sbjct: 36 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 95
Query: 161 ELP--DLSRISGLLTFFAENNQLRGGIPEFDFSNLLQ---FNVSNNNLS 204
+ + L T +N++ + F L ++ +N ++
Sbjct: 96 -VQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQIT 142
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 55/322 (17%), Positives = 100/322 (31%), Gaps = 97/322 (30%)
Query: 352 ELLGRGK-----HGSLYRVVLDDGLML-AVKRLRDWSISSE--DFKNRMQKIDHVKHPNV 403
LG+G G VV D+ A+K + + + E +F N + +V
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 404 LPPLAYYCSKQEKLL-VYEYQPNGSLFNLLHGSENGQSFDWGSR-------LRVAACVAK 455
+ L S+ + L + E G L + L + + +++A +A
Sbjct: 91 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 456 ALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL---IVTEN------------- 499
+A L + H +L + N + + I ++G+ I +
Sbjct: 150 GMAY----LNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 500 -------HDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNN 547
D F T +DV+ FGV+L E+ T + + N
Sbjct: 206 WMSPESLKDGVF------------------TTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 548 GFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNER 600
+V V+ + K L ++ C +P R
Sbjct: 248 ------------------QVLRFVM-----EGGLLDKPDNCPDMLFELMRMCWQYNPKMR 284
Query: 601 PSMNQVAVMINNIKEEEERSIS 622
PS ++ I E R +S
Sbjct: 285 PSFLEIISSIKEEMEPGFREVS 306
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK---HPNVLPPL 407
E LG G +GS+Y+ + + G ++A+K++ D + +++I ++ P+V+
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVP----VESDLQEIIKEISIMQQCDSPHVV--- 87
Query: 408 AYYCS--KQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
YY S K L +V EY GS+ +++ + D + + K L +H
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT--ILQSTLKGLEYLHFM- 144
Query: 465 REDGIAHGNLKSNNILFNNN 484
H ++K+ NIL N
Sbjct: 145 ---RKIHRDIKAGNILLNTE 161
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 41/230 (17%), Positives = 86/230 (37%), Gaps = 55/230 (23%)
Query: 330 LVVLTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDF 388
V + ++ K D + +++LG G +G + ++ A+K L+D
Sbjct: 2 PHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKA 57
Query: 389 KNRMQKIDHV-KHPNVLPPLAYY----CSKQEKLLVYEYQPNGSLFN--LLHG----SEN 437
+ ++ + P+++ + Y ++ L+V E G LF+ G +E
Sbjct: 58 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE- 116
Query: 438 GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPC---ISEYGL 494
R A+ + K++ + L IAH ++K N+L+ + ++++G
Sbjct: 117 ----------REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166
Query: 495 ---IVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTG 541
E +D+ D++ GVI+ LL G
Sbjct: 167 AKETTGEKYDK----------------------SCDMWSLGVIMYILLCG 194
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 46/241 (19%), Positives = 80/241 (33%), Gaps = 62/241 (25%)
Query: 333 LTSSKVNKLKFEDLLRAPAELLGRGKHGSLYRV-VLDDGLMLAVKRLRDWSISSEDFKNR 391
L + + + F R +LGRG G ++ + G + A K+L K R
Sbjct: 177 LEAQPMGEDWFL-DFR----VLGRGGFGEVFACQMKATGKLYACKKLN---------KKR 222
Query: 392 MQKIDHVKHP----NVL-----P---PLAYYCSKQEKL-LVYEYQPNGSLF-NLLHGSEN 437
++K + +L LAY + L LV G + ++ + E+
Sbjct: 223 LKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 438 GQSFDWGSRLRV-AACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496
F R A + L +H+ I + +LK N+L +++ IS+ GL V
Sbjct: 283 NPGFQ-EPRAIFYTAQIVSGLEHLHQR----NIIYRDLKPENVLLDDDGNVRISDLGLAV 337
Query: 497 TENHDQSFLAQTSSLKINDISNQMCSTIK---------------ADVYGFGVILLELLTG 541
E + T D + GV L E++
Sbjct: 338 -EL-----------KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
Query: 542 K 542
+
Sbjct: 386 R 386
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 36/229 (15%), Positives = 70/229 (30%), Gaps = 68/229 (29%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVK---------RLRDWSISSEDFKNRMQKIDHVKHP 401
+ LG G G + +A++ + + + + ++ + + HP
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 402 NVLPPLAYYCSKQEKLLVYEYQPNGSLFNLL----HGSENGQSFDWGSRLRVAACVAK-- 455
++ ++ ++ +V E G LF+ + E
Sbjct: 201 CIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKE-----------ATCKLYFYQM 248
Query: 456 --ALALIHEELREDGIAHGNLKSNNILFNNNMEPC---ISEYGLIVTENHDQSFLAQTSS 510
A+ +HE GI H +LK N+L ++ E C I+++G
Sbjct: 249 LLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM------ 298
Query: 511 LKINDISNQMCST------------------IKADVYGFGVILLELLTG 541
+C T D + GVIL L+G
Sbjct: 299 -------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 56/315 (17%), Positives = 105/315 (33%), Gaps = 82/315 (26%)
Query: 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSE--DFK---NRMQKIDHVKHPNVLP 405
A G K G +V AVK L++ + SSE M ++ H N++
Sbjct: 64 ATAYGISKTGVSIQV--------AVKMLKEKADSSEREALMSELKMMTQLG--SHENIVN 113
Query: 406 PLAYYCSKQEKLLV-YEYQPNGSLFNLLHGSENGQSFDWGSR------------------ 446
L C+ + + +EY G L N L S D
Sbjct: 114 LLGA-CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 447 --LRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF 504
L A VAK + E L H +L + N+L + I ++GL D ++
Sbjct: 173 DLLCFAYQVAKGM----EFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 505 LAQTSSL---K---INDISNQMCSTIKADVYGFGVILLELLT-GKL----VQNNGFNLAT 553
+ + ++ K + + TIK+DV+ +G++L E+ + G + +
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIY-TIKSDVWSYGILLWEIFSLGVNPYPGIPVD------ 281
Query: 554 WVHSVVREEWTVEVFDEVLIAEAASEERMLK-------LLQVALRCINQSPNERPSMNQV 606
+ + + +M + + + C +RPS +
Sbjct: 282 -----------ANFYKLIQ-----NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNL 325
Query: 607 AVMINNIKEEEERSI 621
+ + E ++
Sbjct: 326 TSFLGCQLADAEEAM 340
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 43/235 (18%), Positives = 84/235 (35%), Gaps = 42/235 (17%)
Query: 332 VLTSSKVNKLKFED--LLRAPAELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSISS 385
++ K +L+ +D +L+ ++GRG V + G + A+K + W +
Sbjct: 49 IVVRLKEVRLQRDDFEILK----VIGRGAFS---EVAVVKMKQTGQVYAMKIMNKWDMLK 101
Query: 386 ED----FKNRMQKIDHVKHPNVLPPLAYYCSKQ--EKL-LVYEYQPNGSLFNLLHGSENG 438
F+ + + + L + + Q L LV EY G L LL S+ G
Sbjct: 102 RGEVSCFREERDVLVNGDRR-WITQL--HFAFQDENYLYLVMEYYVGGDLLTLL--SKFG 156
Query: 439 QSFDWGSRLRV-AACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497
+ R A + A+ +H G H ++K +NIL + ++++G +
Sbjct: 157 ERIP-AEMARFYLAEIVMAIDSVHRL----GYVHRDIKPDNILLDRCGHIRLADFGSCLK 211
Query: 498 ENHDQSFLAQTSS-----------LKINDISNQMCSTIKADVYGFGVILLELLTG 541
D + + + + + D + GV E+ G
Sbjct: 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG 266
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 14/135 (10%)
Query: 99 SLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSL-SKLNNLKRLDISNN 156
+L L + +N + + + L L + RN+L +LP + L L L + N
Sbjct: 86 NLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYN 143
Query: 157 NFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDF---SNLLQFNVSNNNLSGPVPGVN 211
S LP +++ L NNQL+ +PE F + L + NN L G
Sbjct: 144 ELQS-LPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAF 201
Query: 212 GRLGADSF---SGNP 223
L NP
Sbjct: 202 DSLEKLKMLQLQENP 216
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 8e-04
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 27/153 (17%)
Query: 59 CSGKWVGVTCDSRQ-KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQE 117
C+ V C S++ ++ S I T L L+ N ++ S+
Sbjct: 14 CNNNKNSVDCSSKKLTAIP---------SNIPADTKK--------LDLQSNKLSSLPSKA 56
Query: 118 ISNCKQLTHLYVGRNKLSGNLPDSL-SKLNNLKRLDISNNNFSSELPD--LSRISGLLTF 174
+L LY+ NKL LP + +L NL+ L +++N + LP ++ L
Sbjct: 57 FHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAEL 114
Query: 175 FAENNQLRGGIPE--FD-FSNLLQFNVSNNNLS 204
+ NQL+ +P FD + L ++ N L
Sbjct: 115 RLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQ 146
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 37/190 (19%), Positives = 78/190 (41%), Gaps = 33/190 (17%)
Query: 370 GLMLAVKRLRDWSISSEDFKNRMQKIDHVK---HPNVLPPLAYYCSKQEKLLVYEYQPNG 426
G +A+K + ++ + +++ +K HPN++ +++ L+ EY G
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99
Query: 427 SLFNLLHGSENGQSFDWGSRLRVAACVAK------ALALIHEELREDGIAHGNLKSNNIL 480
+F+ L +G R++ +K A+ H++ I H +LK+ N+L
Sbjct: 100 EVFDYL--VAHG-------RMKEKEARSKFRQIVSAVQYCHQK----RIVHRDLKAENLL 146
Query: 481 FNNNMEPCISEYGLIVTENHDQSFLAQTS--SL-----KINDISNQMCSTIKADVYGFGV 533
+ +M I+++G L + ++ + + DV+ GV
Sbjct: 147 LDADMNIKIADFGFSNEFTVGG-KL-DAFCGAPPYAAPEL--FQGKKYDGPEVDVWSLGV 202
Query: 534 ILLELLTGKL 543
IL L++G L
Sbjct: 203 ILYTLVSGSL 212
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 4e-04
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 99 SLVVLSLEENNI----AGTVSQEISNCKQLTHLYVGRNKLSG----NLPDSLSKLN-NLK 149
L L + E I G + + + + L L + N+L L ++L + L+
Sbjct: 257 RLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLE 316
Query: 150 RLDISNNNFSSE 161
L + + +F++
Sbjct: 317 SLWVKSCSFTAA 328
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 41/206 (19%), Positives = 83/206 (40%), Gaps = 31/206 (15%)
Query: 296 NSNKRSSISSVHRAGDNRSEYSITSVDSGAASSSLVVLTSSKVNKLKFEDLLR-APAELL 354
+ +S + + S + V S + + ++ + +++
Sbjct: 3 GRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVI 62
Query: 355 GRGKHGSLYR-VVLDDGLMLAVKRLRDWSISSEDFKNR-MQKIDHVKHPNVLPPLAYYCS 412
G G G +Y+ + D G ++A+K++ + FKNR +Q + + H N++ ++ S
Sbjct: 63 GNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYFFYS 118
Query: 413 KQEKL------LVYEYQPNGSLFNLL-HGSENGQSFDWGSRLRVAAC------VAKALAL 459
EK LV +Y P +++ + H S Q L V + ++LA
Sbjct: 119 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQ------TLPVIYVKLYMYQLFRSLAY 171
Query: 460 IHEELREDGIAHGNLKSNNILFNNNM 485
IH GI H ++K N+L + +
Sbjct: 172 IHSF----GICHRDIKPQNLLLDPDT 193
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 5e-04
Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 43/217 (19%)
Query: 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSE--DFK---NRMQKIDHVKHPNVLP 405
A G K + V AVK L+ + +E + + H N++
Sbjct: 42 ATAYGLIKSDAAMTV--------AVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVN 91
Query: 406 PLAYYCSKQEKLLV-YEYQPNGSLFNLLHGSENGQSFDWGSR---------------LRV 449
L C+ LV EY G L N L + S L
Sbjct: 92 LLGA-CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 450 AACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTS 509
+ VAK +A L H +L + NIL + I ++GL +D +++ + +
Sbjct: 151 SYQVAKGMAF----LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 510 SL---K---INDISNQMCSTIKADVYGFGVILLELLT 540
+ K I N + T ++DV+ +G+ L EL +
Sbjct: 207 ARLPVKWMAPESIFNCVY-TFESDVWSYGIFLWELFS 242
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 5e-04
Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 39/195 (20%)
Query: 374 AVKRLRDWSISSE--DFK---NRMQKIDHVKHPNVLPPLAYYCSKQEKL-LVYEYQPNGS 427
AVK L+D + + D M+ I KH N++ L C++ L ++ EY G+
Sbjct: 71 AVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGA-CTQDGPLYVIVEYASKGN 127
Query: 428 LFNLL-------------HGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNL 474
L L + + + +A+ + L H +L
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY----LASQKCIHRDL 183
Query: 475 KSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSL---K------INDISNQMCSTIK 525
+ N+L N I+++GL N+ + T+ K + D ++ T +
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD---RVY-THQ 239
Query: 526 ADVYGFGVILLELLT 540
+DV+ FGV++ E+ T
Sbjct: 240 SDVWSFGVLMWEIFT 254
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 7e-04
Identities = 27/150 (18%), Positives = 59/150 (39%), Gaps = 32/150 (21%)
Query: 352 ELLGRGKHGSLYR-VVLDDGLMLAVKRLRDWSISSEDFKNR----MQKIDHVKHPNVLPP 406
+ G+G G++ G+ +A+K++ F+NR MQ + + HPN++
Sbjct: 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR----FRNRELQIMQDLAVLHHPNIVQL 84
Query: 407 LAYYCSKQEK-------LLVYEYQPNGSLFNLL-HGSENGQSFDWGSRLRVAAC------ 452
+Y+ + E+ +V EY P+ +L +
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQV------APPPILIKVFLFQ 137
Query: 453 VAKALALIHEELREDGIAHGNLKSNNILFN 482
+ +++ +H + H ++K +N+L N
Sbjct: 138 LIRSIGCLHLPSV--NVCHRDIKPHNVLVN 165
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 626 | |||
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.94 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.94 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.92 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.9 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.88 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.88 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.88 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.86 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.81 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.8 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.77 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.76 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.76 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.75 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.75 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.72 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.71 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.7 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.67 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.66 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.66 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.64 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.64 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.64 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.64 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.64 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.64 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.64 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.63 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.63 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.63 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.63 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.62 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.62 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.62 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.62 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.62 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.62 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.61 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.61 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.6 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.6 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.6 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.6 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.6 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.6 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.6 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.6 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.59 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.59 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.59 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.58 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.58 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.57 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.57 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.57 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.57 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.56 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.56 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.55 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.55 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.55 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.54 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.54 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.54 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.54 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.54 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.54 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.53 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.53 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.52 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.52 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.51 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.51 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.5 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.5 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.5 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.5 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.5 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.5 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.49 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.49 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.49 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.49 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.49 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.47 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.47 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.46 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.46 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.46 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.46 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.45 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.45 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.44 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.44 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.44 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.43 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.43 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.43 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.43 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.43 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.42 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.42 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.42 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.41 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.41 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.41 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.41 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.4 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.4 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.4 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.39 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.39 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.39 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.39 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.38 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.38 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.37 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.36 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.36 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.36 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.35 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.34 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.32 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.32 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.29 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.29 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.25 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.25 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.24 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.24 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.23 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.22 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.19 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.18 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.16 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.14 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.13 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.12 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.11 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.06 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.97 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.95 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.93 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.86 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.84 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.69 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.6 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.54 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.46 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.36 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.31 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.27 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.26 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.25 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.21 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.17 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.03 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.98 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 97.97 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.96 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.89 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.88 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 97.87 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 97.84 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 97.8 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.66 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.51 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.48 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.2 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.11 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 97.05 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 97.0 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 96.88 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.84 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 96.78 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.77 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.54 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.52 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 96.51 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.36 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.31 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.28 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 95.81 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 95.53 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 95.52 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 94.96 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 94.73 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 94.24 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 94.12 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 93.03 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 92.16 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 91.58 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 91.26 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 90.52 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 89.69 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 80.67 |
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-53 Score=435.77 Aligned_cols=259 Identities=18% Similarity=0.306 Sum_probs=209.8
Q ss_pred ccchhhhhcccccccccCCCcceEEEEeC------CCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEe
Q 006903 340 KLKFEDLLRAPAELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCS 412 (626)
Q Consensus 340 ~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~ 412 (626)
.++.+++. ..+.||+|+||+||+|++. +++.||||+++... ...++|.+|+++|++++|||||+++|+|.+
T Consensus 9 ~I~r~~~~--l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~ 86 (299)
T 4asz_A 9 HIKRHNIV--LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE 86 (299)
T ss_dssp BCCGGGEE--EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred ccCHHHeE--EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee
Confidence 34445543 3478999999999999853 47899999998654 234679999999999999999999999999
Q ss_pred CCeEEEEEeecCCCChhHhhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC
Q 006903 413 KQEKLLVYEYQPNGSLFNLLHGSE----------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN 482 (626)
Q Consensus 413 ~~~~~lv~Ey~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~ 482 (626)
++..+||||||++|+|.++|+... ....++|.+++.|+.|||+||+||| +++||||||||+|||++
T Consensus 87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDlKp~NILl~ 162 (299)
T 4asz_A 87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA----SQHFVHRDLATRNCLVG 162 (299)
T ss_dssp SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCccCHhhEEEC
Confidence 999999999999999999996421 2357999999999999999999999 57999999999999999
Q ss_pred CCCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHH
Q 006903 483 NNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVH 556 (626)
Q Consensus 483 ~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~ 556 (626)
+++.+||+|||+++...... ....+|..|+|||......++.++|||||||++|||+| |+.||... +..+...
T Consensus 163 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~-~~~~~~~ 241 (299)
T 4asz_A 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL-SNNEVIE 241 (299)
T ss_dssp GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHHHHH
T ss_pred CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC-CHHHHHH
Confidence 99999999999997543221 22357889999999998899999999999999999999 89998743 3444444
Q ss_pred HHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 557 SVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 557 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+...... . .+..++..+.+++.+||+.||++||||+||++.|+++.+.
T Consensus 242 ~i~~~~~~-~----------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 242 CITQGRVL-Q----------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHHTCCC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCC-C----------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 44333211 1 1122344588999999999999999999999999998754
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-53 Score=435.36 Aligned_cols=256 Identities=18% Similarity=0.287 Sum_probs=207.8
Q ss_pred ccchhhhhcccccccccCCCcceEEEEeC------CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEE
Q 006903 340 KLKFEDLLRAPAELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411 (626)
Q Consensus 340 ~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~ 411 (626)
.++++++. ..+.||+|+||+||+|.+. +++.||||+++... ...++|.+|+.++++++|||||+++|+|.
T Consensus 22 ei~~~~~~--~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~ 99 (308)
T 4gt4_A 22 EISLSAVR--FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99 (308)
T ss_dssp BCCGGGEE--EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCCHHHCe--EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence 34444442 2477999999999999862 47899999997654 34578999999999999999999999999
Q ss_pred eCCeEEEEEeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCC
Q 006903 412 SKQEKLLVYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNN 478 (626)
Q Consensus 412 ~~~~~~lv~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~N 478 (626)
+++..+||||||++|+|.++|+.... ...++|..+++|+.|||+||+||| +++||||||||+|
T Consensus 100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDLK~~N 175 (308)
T 4gt4_A 100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS----SHHVVHKDLATRN 175 (308)
T ss_dssp SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGG
T ss_pred ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH----hCCCCCCCccccc
Confidence 99999999999999999999964321 236899999999999999999999 5789999999999
Q ss_pred eeeCCCCCeEEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchh
Q 006903 479 ILFNNNMEPCISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLA 552 (626)
Q Consensus 479 ILl~~~~~~kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~ 552 (626)
|||++++.+||+|||+++..... .....++..|+|||......++.++|||||||++|||+| |+.||.+ .+..
T Consensus 176 ILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~-~~~~ 254 (308)
T 4gt4_A 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG-YSNQ 254 (308)
T ss_dssp EEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT-CCHH
T ss_pred eEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCC-CCHH
Confidence 99999999999999998753221 223467889999999988899999999999999999999 8889864 3444
Q ss_pred HHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 553 TWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 553 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
+.+..+..... .. .++.++..+.+++.+||+.||++||||+||++.|+.+
T Consensus 255 ~~~~~i~~~~~-~~----------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 255 DVVEMIRNRQV-LP----------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHHTTCC-CC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHcCCC-CC----------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 44444433221 11 1223345688999999999999999999999999875
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-53 Score=437.61 Aligned_cols=259 Identities=20% Similarity=0.291 Sum_probs=206.6
Q ss_pred ccchhhhhcccccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEe
Q 006903 340 KLKFEDLLRAPAELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCS 412 (626)
Q Consensus 340 ~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~ 412 (626)
.++.+|+. ..+.||+|+||+||+|++. +++.||||+++.... ..++|.+|+++|++++|||||+++|+|.+
T Consensus 37 ~i~~~d~~--l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~ 114 (329)
T 4aoj_A 37 HIKRRDIV--LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE 114 (329)
T ss_dssp BCCGGGEE--EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred ccCHHHeE--EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence 34445553 2478999999999999864 478999999986542 34679999999999999999999999999
Q ss_pred CCeEEEEEeecCCCChhHhhcCCCC------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCee
Q 006903 413 KQEKLLVYEYQPNGSLFNLLHGSEN------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNIL 480 (626)
Q Consensus 413 ~~~~~lv~Ey~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NIL 480 (626)
.+..+||||||++|+|.++++.... ..+++|.+++.|+.|||+||+||| +++||||||||+|||
T Consensus 115 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDLKp~NIL 190 (329)
T 4aoj_A 115 GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA----GLHFVHRDLATRNCL 190 (329)
T ss_dssp SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecccccHhhEE
Confidence 9999999999999999999975321 246999999999999999999999 578999999999999
Q ss_pred eCCCCCeEEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHH
Q 006903 481 FNNNMEPCISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATW 554 (626)
Q Consensus 481 l~~~~~~kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~ 554 (626)
|++++.+||+|||+++..... .....+|..|+|||......++.++|||||||++|||+| |+.||... +..+.
T Consensus 191 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~-~~~~~ 269 (329)
T 4aoj_A 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL-SNTEA 269 (329)
T ss_dssp EETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS-CHHHH
T ss_pred ECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC-CHHHH
Confidence 999999999999999754322 123457889999999999999999999999999999999 89998743 33344
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+..+...... . .+..++..+.+|+.+||+.||++||||+||+++|+.+.+.
T Consensus 270 ~~~i~~g~~~-~----------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 270 IDCITQGREL-E----------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHHHTCCC-C----------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHcCCCC-C----------CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 4443332211 1 1122334588999999999999999999999999998754
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-52 Score=429.47 Aligned_cols=260 Identities=20% Similarity=0.345 Sum_probs=204.0
Q ss_pred cccchhhhhcccccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCe
Q 006903 339 NKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQE 415 (626)
Q Consensus 339 ~~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~ 415 (626)
+.++++++. ..+.||+|+||+||+|++.+ .||||+++...... +.|.+|++++++++|||||+++|++. ++.
T Consensus 31 Wei~~~~l~--l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~ 105 (307)
T 3omv_A 31 WEIEASEVM--LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDN 105 (307)
T ss_dssp CBCCTTSCC--EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred cEEcHHHeE--EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCe
Confidence 345555553 35789999999999999753 59999997655433 57899999999999999999999865 567
Q ss_pred EEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 416 KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
.+||||||++|+|.++|+.. ...++|.+++.|+.|||+||+||| +++||||||||+||||++++.+||+|||+|
T Consensus 106 ~~iVmEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH----~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 179 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLH----AKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCCSSSEEEETTEEEEECCCSSC
T ss_pred EEEEEEcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCccCHHHEEECCCCcEEEeeccCc
Confidence 89999999999999999742 356999999999999999999999 579999999999999999999999999999
Q ss_pred cccCC-----Cccccccccccchhhcccc---CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccc
Q 006903 496 VTENH-----DQSFLAQTSSLKINDISNQ---MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEV 567 (626)
Q Consensus 496 ~~~~~-----~~~~~~~~~~~~~pe~~~~---~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 567 (626)
+.... ......||+.|+|||++.. ..++.++|||||||++|||+||+.||.+..+.......+.........
T Consensus 180 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~ 259 (307)
T 3omv_A 180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDL 259 (307)
T ss_dssp BC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCS
T ss_pred eecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCc
Confidence 75332 1233568999999998753 357899999999999999999999997544433333222222111110
Q ss_pred ccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 568 FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 568 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
......++..+.+++.+||+.||++||||.||++.|+.++..
T Consensus 260 -------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 260 -------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp -------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred -------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 011223345688999999999999999999999999988643
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-51 Score=424.48 Aligned_cols=258 Identities=22% Similarity=0.309 Sum_probs=197.1
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCC----eEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ----EKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~----~~~lv~Ey~~~g 426 (626)
.+.||+|+||+||+|++ +|+.||||+++........+..|+..+.+++|||||+++|+|..++ ..|||||||++|
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~g 86 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG 86 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCC
Confidence 47899999999999998 5899999999764333333456777778899999999999998754 579999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc----cCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL----REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
+|.++|+. ..++|..+.+++.|+++||+|||+.+ +.++||||||||+|||++.++++||+|||+++......
T Consensus 87 sL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 162 (303)
T 3hmm_A 87 SLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162 (303)
T ss_dssp BHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT
T ss_pred cHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCC
Confidence 99999974 35899999999999999999999532 24599999999999999999999999999987543221
Q ss_pred -------cccccccccchhhccccC------CCCCcchhHHHHHHHHHHHcCCCCCCCCc--------------chhHHH
Q 006903 503 -------SFLAQTSSLKINDISNQM------CSTIKADVYGFGVILLELLTGKLVQNNGF--------------NLATWV 555 (626)
Q Consensus 503 -------~~~~~~~~~~~pe~~~~~------~~~~k~DVwSfGvvl~elltg~~p~~~~~--------------~~~~~~ 555 (626)
....||+.|+|||++... .++.++|||||||++|||+||+.|+.... ......
T Consensus 163 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 242 (303)
T 3hmm_A 163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR 242 (303)
T ss_dssp TEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHH
T ss_pred CceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHH
Confidence 224689999999987643 25679999999999999999987754211 111111
Q ss_pred HHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 556 HSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 556 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
....... .++.++......+.+..+.+++.+||+.||++||||.||++.|+++.+++.
T Consensus 243 ~~~~~~~-----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ 300 (303)
T 3hmm_A 243 KVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp HHHTTSC-----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHHhccc-----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcC
Confidence 1111111 111111222234556778999999999999999999999999999976543
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-50 Score=419.23 Aligned_cols=241 Identities=21% Similarity=0.334 Sum_probs=197.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||+||+|+. .+|+.||||+++..... .+.+.+|+++|++++|||||++++++.+++..|||||||++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG 108 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 47899999999999984 57999999999765533 356899999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---S 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~ 503 (626)
+|.+++... ....+++.....|+.||+.||.||| ++|||||||||+||||+.++.+||+|||+++...... .
T Consensus 109 ~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 183 (350)
T 4b9d_A 109 DLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVH----DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183 (350)
T ss_dssp BHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH----HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHH
T ss_pred cHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCccccc
Confidence 999999643 3456789999999999999999999 6799999999999999999999999999998654322 2
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...||+.|++||++.+..|+.++|||||||++|||+||+.||... +..+.+..+....... .+.....
T Consensus 184 ~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~-~~~~~~~~i~~~~~~~-----------~~~~~s~ 251 (350)
T 4b9d_A 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-SMKNLVLKIISGSFPP-----------VSLHYSY 251 (350)
T ss_dssp HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHTCCCC-----------CCTTSCH
T ss_pred ccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHcCCCCC-----------CCccCCH
Confidence 356899999999999889999999999999999999999999754 4455555555443221 0111233
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 252 DLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 5788999999999999999999976
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-50 Score=407.16 Aligned_cols=239 Identities=22% Similarity=0.314 Sum_probs=196.0
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEe----CCeEEEEEeec
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCS----KQEKLLVYEYQ 423 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~----~~~~~lv~Ey~ 423 (626)
+.||+|+||+||+|.. .++..||||++...... .+.|.+|++++++++|||||+++++|.+ ++..|||||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 5699999999999985 56899999999765433 3568999999999999999999999875 34579999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeCC-CCCeEEeeccCccccCC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFNN-NMEPCISEYGLIVTENH 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~~~ 500 (626)
++|+|.++++. ...+++..+..++.||+.||+||| +++ ||||||||+|||++. ++.+||+|||+|+....
T Consensus 112 ~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH----~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 112 TSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLH----TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999963 357999999999999999999999 455 999999999999984 78999999999976433
Q ss_pred C-ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 501 D-QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 501 ~-~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
. .....||+.|+|||+..+ .++.++|||||||++|||+||+.||.+..+.......+....... .++ ...
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~-~~~-----~~~-- 255 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA-SFD-----KVA-- 255 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG-GGG-----GCC--
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCC-CCC-----ccC--
Confidence 2 234578999999998865 589999999999999999999999986655555554444332111 111 111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+.+++.+||+.||++|||++|+++
T Consensus 256 --~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 256 --IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 234788999999999999999999975
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-50 Score=413.77 Aligned_cols=245 Identities=17% Similarity=0.224 Sum_probs=200.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|+. .+|+.||||+++.... ..+|++++++++|||||++++++.+++..|||||||++|+|.
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 138 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLG 138 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHH
Confidence 46799999999999995 5799999999976432 247999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCccccCCC-------
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTENHD------- 501 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~~~~------- 501 (626)
++++. ...+++..+..++.||+.||+||| +++||||||||+|||++.++ .+||+|||+++.....
T Consensus 139 ~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 139 QLIKQ---MGCLPEDRALYYLGQALEGLEYLH----TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp HHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred HHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 99963 346999999999999999999999 78999999999999999987 6999999999754321
Q ss_pred -ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 502 -QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 502 -~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
.....||+.|+|||++....|+.++|||||||++|||+||+.||..... .+....+........ ..++.
T Consensus 212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-~~~~~~i~~~~~~~~---------~~~~~ 281 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR-GPLCLKIASEPPPIR---------EIPPS 281 (336)
T ss_dssp --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC-SCCHHHHHHSCCGGG---------GSCTT
T ss_pred cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-HHHHHHHHcCCCCch---------hcCcc
Confidence 1234689999999999988999999999999999999999999974322 222333333221111 11122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
....+.+++.+||+.||++|||+.|+++.|.....+
T Consensus 282 ~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 282 CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 334588899999999999999999999998876543
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-50 Score=421.00 Aligned_cols=259 Identities=19% Similarity=0.266 Sum_probs=205.9
Q ss_pred cchhhhhcccccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCC-CCccccceEEE
Q 006903 341 LKFEDLLRAPAELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKH-PNVLPPLAYYC 411 (626)
Q Consensus 341 ~~~~~l~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H-~nIv~l~g~~~ 411 (626)
++.+++. ..+.||+|+||+||+|.+. +++.||||.++.... ..++|.+|+++|.+++| ||||+++|+|.
T Consensus 61 i~~~~~~--l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~ 138 (353)
T 4ase_A 61 FPRDRLK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 138 (353)
T ss_dssp CCGGGEE--EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ecHHHeE--EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence 4444442 3578999999999999843 246899999976543 23579999999999965 89999999987
Q ss_pred eC-CeEEEEEeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCC
Q 006903 412 SK-QEKLLVYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSN 477 (626)
Q Consensus 412 ~~-~~~~lv~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~ 477 (626)
.+ +..++|||||++|+|.++|+.... ...++|..++.++.|||+||+||| +++||||||||+
T Consensus 139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH----~~~iiHRDLK~~ 214 (353)
T 4ase_A 139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAAR 214 (353)
T ss_dssp CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGG
T ss_pred ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh----hCCeecCccCcc
Confidence 65 568999999999999999974321 245899999999999999999999 679999999999
Q ss_pred CeeeCCCCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcch
Q 006903 478 NILFNNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNL 551 (626)
Q Consensus 478 NILl~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~ 551 (626)
|||+++++.+||+|||+++...... ....+|..|+|||.+....++.++|||||||++|||+| |+.||.+....
T Consensus 215 NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~ 294 (353)
T 4ase_A 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 294 (353)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred ceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999999998643322 22457888999999998899999999999999999998 89999754333
Q ss_pred hHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 552 ATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 552 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
..... .......... ++.+...+.+++.+||+.||++||||.||++.|+++.+.
T Consensus 295 ~~~~~-~i~~g~~~~~----------p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 295 EEFCR-RLKEGTRMRA----------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHHH-HHHHTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHcCCCCCC----------CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 33332 2222222111 112234588999999999999999999999999988653
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-50 Score=413.59 Aligned_cols=239 Identities=18% Similarity=0.272 Sum_probs=200.1
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||+++++|.+++..|||||||++|+|.
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 159 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 6799999999999995 579999999997544 34567899999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~~ 506 (626)
+++.. ..+++..+..++.||+.||+||| +++||||||||+|||++.++.+||+|||+++..... .....
T Consensus 160 ~~l~~----~~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~ 231 (346)
T 4fih_A 160 DIVTH----TRMNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV 231 (346)
T ss_dssp HHHHH----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCC
T ss_pred HHHHc----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccc
Confidence 99963 35899999999999999999999 679999999999999999999999999998764332 23467
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
||+.|+|||++....|+.++|||||||++|||+||+.||.+. +..+.+..+..... ..... .......+.
T Consensus 232 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-~~~~~~~~i~~~~~-~~~~~--------~~~~s~~~~ 301 (346)
T 4fih_A 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-PPLKAMKMIRDNLP-PRLKN--------LHKVSPSLK 301 (346)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-CHHHHHHHHHHSSC-CCCSC--------GGGSCHHHH
T ss_pred cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHcCCC-CCCCc--------cccCCHHHH
Confidence 999999999998888999999999999999999999999754 33333333332211 11100 011223578
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 006903 587 QVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+++.+||+.||++|||++|+++
T Consensus 302 dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 302 GFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHcCCChhHCcCHHHHhc
Confidence 8999999999999999999976
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=414.69 Aligned_cols=240 Identities=18% Similarity=0.264 Sum_probs=200.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||+++++|.+++..|||||||++|+|
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L 235 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcH
Confidence 36799999999999995 579999999997654 3456789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.++++. ..+++..+..|+.||+.||+||| +++||||||||+||||+.++.+||+|||+++..... ....
T Consensus 236 ~~~i~~----~~l~e~~~~~~~~qil~aL~ylH----~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 307 (423)
T 4fie_A 236 TDIVTH----TRMNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 307 (423)
T ss_dssp HHHHHH----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCC
T ss_pred HHHHhc----cCCCHHHHHHHHHHHHHHHHHHH----HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcccccc
Confidence 999963 35899999999999999999999 679999999999999999999999999998764332 2346
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.||+.|+|||++....|+.++|||||||++|||++|+.||.+.. ..+.+..+..... ..... .......+
T Consensus 308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-~~~~~~~i~~~~~-~~~~~--------~~~~s~~~ 377 (423)
T 4fie_A 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-PLKAMKMIRDNLP-PRLKN--------LHKVSPSL 377 (423)
T ss_dssp EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHSCC-CCCSC--------TTSSCHHH
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-HHHHHHHHHcCCC-CCCcc--------cccCCHHH
Confidence 78999999999998899999999999999999999999997543 3333333332211 11100 01122347
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+|+.+||+.||++|||++|+++
T Consensus 378 ~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 378 KGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHcCCChhHCcCHHHHhc
Confidence 88999999999999999999987
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-49 Score=403.99 Aligned_cols=238 Identities=18% Similarity=0.277 Sum_probs=201.1
Q ss_pred cccccccCCCcceEEEE-eCCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 350 PAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
..+.||+|+||+||+|+ ..+|+.||||++.+.. ...+.+.+|+++|++++|||||++++++.+++..|+|||||+
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 35789999999999998 4679999999997532 345679999999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
+|+|.+++.. ...+++.....++.||+.||+||| +++||||||||+|||++.++.+||+|||+++.....
T Consensus 116 gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH----~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 116 NGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp TEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999999963 346999999999999999999999 679999999999999999999999999999764321
Q ss_pred --ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 502 --QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
.....||+.|+|||+.....|+.++||||+||++|||+||+.||... +..+....+....... . +..
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-~~~~~~~~i~~~~~~~---p-----~~~-- 257 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEGLIFAKIIKLEYDF---P-----EKF-- 257 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCC---C-----TTC--
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCC---C-----ccc--
Confidence 23457999999999999889999999999999999999999999743 4445555554443211 0 112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVA 607 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~ 607 (626)
...+.+++.+||+.||++|||++|+.
T Consensus 258 --s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 258 --FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp --CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred --CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 23478899999999999999999864
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=393.26 Aligned_cols=237 Identities=18% Similarity=0.268 Sum_probs=187.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||+||+|+. .+|+.||||++++.. ...+.+.+|++++++++|||||++++++.+++..|+||||+ +
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~ 96 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence 47899999999999994 579999999997543 23457899999999999999999999999999999999999 6
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~ 503 (626)
|+|.+++.. ...+++.....++.||+.||+||| +++|+||||||+|||+++++.+||+|||+++..... ..
T Consensus 97 g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH----~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 169 (275)
T 3hyh_A 97 NELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCH----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 169 (275)
T ss_dssp EEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccC
Confidence 899999964 346999999999999999999999 679999999999999999999999999999764332 23
Q ss_pred ccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
...||+.|+|||+.....+ +.++||||+||++|||+||+.||.. .+..+..+.+....... +....
T Consensus 170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~-~~~~~~~~~i~~~~~~~------------p~~~s 236 (275)
T 3hyh_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGVYTL------------PKFLS 236 (275)
T ss_dssp -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTCCCC------------CTTSC
T ss_pred CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHcCCCCC------------CCCCC
Confidence 4578999999999877665 6899999999999999999999974 34445555444433211 01112
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHc
Confidence 34778999999999999999999987
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-48 Score=396.45 Aligned_cols=240 Identities=19% Similarity=0.283 Sum_probs=185.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCC------------e
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ------------E 415 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~------------~ 415 (626)
.+.||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|+++|++++|||||++++++.+.+ .
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE
Confidence 47899999999999984 5799999999975442 2357899999999999999999999987654 3
Q ss_pred EEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 416 KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
.|+|||||++|+|.+++.........++..++.++.||+.||+||| +++||||||||+|||++.++.+||+|||++
T Consensus 90 l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH----~~~IiHRDlKp~NILl~~~~~vKl~DFGla 165 (299)
T 4g31_A 90 LYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165 (299)
T ss_dssp EEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred EEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH----HCcCccccCcHHHeEECCCCcEEEccCccc
Confidence 6899999999999999975444445677888999999999999999 679999999999999999999999999998
Q ss_pred cccCCCc---------------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh
Q 006903 496 VTENHDQ---------------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR 560 (626)
Q Consensus 496 ~~~~~~~---------------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~ 560 (626)
+...... ....||+.|+|||+.....|+.++|||||||++|||++ ||....+..........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~ 242 (299)
T 4g31_A 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRN 242 (299)
T ss_dssp --------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHT
T ss_pred eecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhc
Confidence 7543211 12358999999999998899999999999999999997 66543222222222221
Q ss_pred cccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 561 EEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 561 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
... .+ ...+..+.+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~-----p~------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 243 LKF-----PP------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp TCC-----CH------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCC-----CC------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111 11 11122334678999999999999999999987
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=399.35 Aligned_cols=238 Identities=20% Similarity=0.277 Sum_probs=192.0
Q ss_pred ccccccCCCcceEEEEe----CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||+||+|+. .+++.||||+++.... ....+.+|+++|++++|||||++++++.+++..|+|||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~ 108 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 108 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcC
Confidence 47899999999999984 2478999999975432 2346889999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--- 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--- 500 (626)
++|+|.+++.. ...+++..+..++.|++.||+||| +++||||||||+|||++.++.+||+|||+++....
T Consensus 109 ~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 181 (304)
T 3ubd_A 109 RGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLH----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181 (304)
T ss_dssp TTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----C
T ss_pred CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCc
Confidence 99999999963 346999999999999999999999 67999999999999999999999999999975322
Q ss_pred CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 501 DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
......||+.|+|||+.....|+.++||||+||++|||+||+.||... +..+....+....... +..
T Consensus 182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~-~~~~~~~~i~~~~~~~------------p~~ 248 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK-DRKETMTMILKAKLGM------------PQF 248 (304)
T ss_dssp CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTT
T ss_pred cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc-CHHHHHHHHHcCCCCC------------CCc
Confidence 223457899999999999899999999999999999999999999743 4445555544432211 111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSM-----NQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~-----~ev~~ 608 (626)
....+.+++.+||+.||++|||+ +|+++
T Consensus 249 ~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 249 LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 22347889999999999999984 56654
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=383.78 Aligned_cols=249 Identities=17% Similarity=0.190 Sum_probs=192.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||+||+|+. .+|+.||||+++..... .+.+.+|+++|++++|||||++++++... +..||||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 47899999999999984 57999999999765433 34688999999999999999999987643 5689999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
|||+ |+|.+++.. ...+++..+..++.||+.||.||| ++|||||||||+|||++.++.+||+|||+++....
T Consensus 139 E~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH----~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 139 DLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp ECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred eCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 9996 789999953 457999999999999999999999 67999999999999999999999999999875321
Q ss_pred -------Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc--ccccH
Q 006903 501 -------DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV--EVFDE 570 (626)
Q Consensus 501 -------~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~d~ 570 (626)
......||+.|+|||+..+ ..++.++||||+||++|||+||+.||.+... .+.+..+....... .....
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~-~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY-VHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-HHHHHHHHHHHCCCCGGGTC-
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcCCCChHHhhh
Confidence 1234578999999998765 4569999999999999999999999975433 33333322211100 00000
Q ss_pred --------HHHh---------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 --------VLIA---------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 --------~~~~---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.... ....+.....+.+|+.+||+.||++|||++|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0000 0000111235789999999999999999999987
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=376.24 Aligned_cols=247 Identities=19% Similarity=0.263 Sum_probs=191.5
Q ss_pred ccccccCCCcceEEEEe----CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||+||+|+. .+++.||||++... .....+.+|+++|+.+ +|||||++++++.+++..|+||||+++
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 57899999999999974 25789999998654 3456788999999988 699999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC-CCeEEeeccCccccCCC---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN-MEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGl~~~~~~~--- 501 (626)
|+|.+++. .+++.++..++.|++.||+||| ++|||||||||+|||++.+ +.+||+|||+|+.....
T Consensus 105 ~~L~~~~~------~l~~~~~~~~~~qll~al~ylH----~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~ 174 (361)
T 4f9c_A 105 ESFLDILN------SLSFQEVREYMLNLFKALKRIH----QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE 174 (361)
T ss_dssp CCHHHHHT------TCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG
T ss_pred ccHHHHHc------CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc
Confidence 99999993 4889999999999999999999 6799999999999999876 79999999998643211
Q ss_pred ----------------------------ccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchh
Q 006903 502 ----------------------------QSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLA 552 (626)
Q Consensus 502 ----------------------------~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~ 552 (626)
.....||+.|+|||+..+. .++.++||||+||++|||+||+.||..+.+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~ 254 (361)
T 4f9c_A 175 LLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDL 254 (361)
T ss_dssp GGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHH
Confidence 1123589999999987654 58999999999999999999999997665544
Q ss_pred HHHHHHhhcccc-----------------ccc----c----------c---HHHHh--------hhccHHHHHHHHHHHh
Q 006903 553 TWVHSVVREEWT-----------------VEV----F----------D---EVLIA--------EAASEERMLKLLQVAL 590 (626)
Q Consensus 553 ~~~~~~~~~~~~-----------------~~~----~----------d---~~~~~--------~~~~~~~~~~l~~l~~ 590 (626)
+.+..+...... .+. . + +.... ..........+.+|+.
T Consensus 255 ~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~ 334 (361)
T 4f9c_A 255 TALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLD 334 (361)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHH
T ss_pred HHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHH
Confidence 433322210000 000 0 0 00000 0000111245789999
Q ss_pred hccCCCCCCCCCHHHHHH
Q 006903 591 RCINQSPNERPSMNQVAV 608 (626)
Q Consensus 591 ~Cl~~dP~~RPs~~ev~~ 608 (626)
+||+.||++|||++|+++
T Consensus 335 ~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 335 KLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHTCSCTTTSCCHHHHHT
T ss_pred HHCcCChhHCcCHHHHhc
Confidence 999999999999999976
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=391.34 Aligned_cols=244 Identities=20% Similarity=0.302 Sum_probs=201.8
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
..+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|+++|+.++|||||++++++.+++..|+|||||++|+
T Consensus 161 i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 357899999999999985 579999999997654 234678899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC--CCeEEeeccCccccCCCc--c
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN--MEPCISEYGLIVTENHDQ--S 503 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGl~~~~~~~~--~ 503 (626)
|.+++.. ....+++.++..++.||+.||.||| +++|+||||||+|||++.+ +.+||+|||+++...... .
T Consensus 241 L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH----~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 241 LFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMH----ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp HHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred HHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 9999963 2356899999999999999999999 6799999999999999854 889999999998654332 3
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...||+.|+|||++....|+.++||||+||++|||++|+.||.+. +..+.+..+....+... +.. ......
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~-~~~~~~~~i~~~~~~~~--~~~------~~~~s~ 385 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDETLRNVKSCDWNMD--DSA------FSGISE 385 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHTTCCCCC--SGG------GTTSCH
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHhCCCCCC--ccc------ccCCCH
Confidence 457899999999999889999999999999999999999999754 33444444444332211 000 011123
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+|+.+||+.||++|||+.|+++
T Consensus 386 ~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 386 DGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 4778999999999999999999987
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=389.43 Aligned_cols=239 Identities=17% Similarity=0.169 Sum_probs=192.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHH---HHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFK---NRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~---~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.++||+|+||+||+|+. .+|+.||||++++.. .....+. .++++++.++|||||+++++|.+++..|+||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 57899999999999995 579999999996432 2223333 346777888999999999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-C
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-D 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~ 501 (626)
|+||+|.++|.. ...+++.....++.||+.||.||| ++|||||||||+||||+.++.+||+|||+|+.... .
T Consensus 274 ~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH----~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~ 346 (689)
T 3v5w_A 274 MNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346 (689)
T ss_dssp CCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC
T ss_pred CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCchHHeEEeCCCCEEecccceeeecCCCC
Confidence 999999999963 346999999999999999999999 78999999999999999999999999999976443 3
Q ss_pred ccccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCc--chhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 502 QSFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGF--NLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....+||+.|+|||++. ...|+.++||||+||++|||+||+.||.... +..+........... .+
T Consensus 347 ~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~------------~p 414 (689)
T 3v5w_A 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE------------LP 414 (689)
T ss_dssp CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCC------------CC
T ss_pred CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC------------CC
Confidence 34467999999999985 4578999999999999999999999996422 222222232222111 01
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
......+.+|+.+||+.||++|++ ++||.+
T Consensus 415 ~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 112234788999999999999998 677754
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-42 Score=355.35 Aligned_cols=262 Identities=28% Similarity=0.464 Sum_probs=213.3
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|...+++.||||++..... ..+.+.+|+++++.++||||+++++++...+..++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 478999999999999988899999999876543 3467999999999999999999999999999999999999999999
Q ss_pred HhhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-----cc
Q 006903 430 NLLHGSEN-GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-----QS 503 (626)
Q Consensus 430 ~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-----~~ 503 (626)
+++..... ...++|..++.++.|++.||.||| +++|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 124 ~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 199 (321)
T 2qkw_B 124 RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLST 199 (321)
T ss_dssp GGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBC
T ss_pred HHHhccCCCccccCHHHHHHHHHHHHHHHHHhc----CCCeecCCCCHHHEEECCCCCEEEeeccccccccccccccccc
Confidence 99965332 236999999999999999999999 579999999999999999999999999998653221 12
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc-----chhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF-----NLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
...++..|++||......++.++|||||||++|||+||+.||.... ....|..............++... ....
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 278 (321)
T 2qkw_B 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLA-DKIR 278 (321)
T ss_dssp CCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCT-TCSC
T ss_pred ccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhc-cccC
Confidence 3457888999999887788999999999999999999999986432 233333332222222223332221 1234
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+....+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 279 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp HHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 567778999999999999999999999999999886543
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-42 Score=356.44 Aligned_cols=262 Identities=31% Similarity=0.525 Sum_probs=212.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|...+|+.||||++..... ....+.+|+++++.++||||+++++++...+..++||||+++|+|
T Consensus 35 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 114 (326)
T 3uim_A 35 KNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114 (326)
T ss_dssp TTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBH
T ss_pred ceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCH
Confidence 478999999999999988899999999976542 334789999999999999999999999999999999999999999
Q ss_pred hHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----c
Q 006903 429 FNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----S 503 (626)
Q Consensus 429 ~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~ 503 (626)
.+++.... ....++|..+..++.|++.||.|||+.+ ..+|+||||||+|||++.++.+||+|||++....... .
T Consensus 115 ~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 193 (326)
T 3uim_A 115 ASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC-DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 193 (326)
T ss_dssp HHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS-SSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEEC
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccc
Confidence 99997543 2346999999999999999999999532 2399999999999999999999999999987543221 2
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCC-------CCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQN-------NGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~-------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
...++..|++||......++.++|||||||++|||+||+.||. ......+|+.............+.... ..
T Consensus 194 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 272 (326)
T 3uim_A 194 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQ-GN 272 (326)
T ss_dssp CCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCT-TS
T ss_pred cccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhc-cc
Confidence 2347889999999877778999999999999999999999985 222334444443333333333333222 23
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
...+....+.+++.+||+.||++|||+.||+++|+...
T Consensus 273 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 273 YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 45667788999999999999999999999999998643
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-42 Score=353.46 Aligned_cols=250 Identities=19% Similarity=0.357 Sum_probs=201.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 57899999999999995 568999999986543 3346789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc------
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ------ 502 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~------ 502 (626)
.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 95 RGIIKSM--DSQYPWSQRVSFAKDIASGMAYLH----SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp HHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred HHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 9999742 356999999999999999999999 5799999999999999999999999999986532211
Q ss_pred -----------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHH
Q 006903 503 -----------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 503 -----------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
....++..|++||......++.++|||||||++|||++|..|+......... ...... .
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---------~~~~~~-~ 238 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---------FGLNVR-G 238 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT---------SSBCHH-H
T ss_pred ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH---------Hhhhhh-c
Confidence 1345788899999998888999999999999999999999887532111000 000000 0
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
......+......+.+++.+||+.||++|||+.|+++.|+.++..
T Consensus 239 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 239 FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp HHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 000011122234588899999999999999999999999998764
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-42 Score=353.00 Aligned_cols=250 Identities=27% Similarity=0.355 Sum_probs=197.4
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|+. +|+.||||++....... +.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 120 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence 47899999999999987 58899999997665433 468899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeCCCCCeEEeeccCccccCCC---c
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---Q 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~ 502 (626)
|.+++........+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 121 L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 121 LYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH----NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp HHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH----TSSSCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH----cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 9999975332234899999999999999999999 667 999999999999999999999999998653322 2
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||+||+.||.... ..+............. .+....
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~-~~~~~~~~~~~~~~~~----------~~~~~~ 265 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-PAQVVAAVGFKCKRLE----------IPRNLN 265 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC-HHHHHHHHHHSCCCCC----------CCTTSC
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCCC----------CCccCC
Confidence 33467889999999988888999999999999999999999997543 2222222211111111 111223
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
..+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 266 ~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 266 PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 3588899999999999999999999999998764
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-42 Score=355.30 Aligned_cols=257 Identities=21% Similarity=0.325 Sum_probs=199.2
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCC----eEEEEEeecCC
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ----EKLLVYEYQPN 425 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~----~~~lv~Ey~~~ 425 (626)
..+.||+|+||.||+|+.. ++.||||++.........+.+|+.++++++||||+++++++.... ..++||||+++
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 3578999999999999875 789999999765544556778999999999999999999998754 36999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh------ccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE------LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~------~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
|+|.++++. ..++|..+..++.|++.||+|||+. +++++|+||||||+|||++.++.+||+|||+++...
T Consensus 107 g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~ 182 (322)
T 3soc_A 107 GSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182 (322)
T ss_dssp CBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEEC
T ss_pred CCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccc
Confidence 999999964 3489999999999999999999932 112299999999999999999999999999986533
Q ss_pred CC-----ccccccccccchhhccccC-----CCCCcchhHHHHHHHHHHHcCCCCCCCCcc---------------hhHH
Q 006903 500 HD-----QSFLAQTSSLKINDISNQM-----CSTIKADVYGFGVILLELLTGKLVQNNGFN---------------LATW 554 (626)
Q Consensus 500 ~~-----~~~~~~~~~~~~pe~~~~~-----~~~~k~DVwSfGvvl~elltg~~p~~~~~~---------------~~~~ 554 (626)
.. .....++..|++||..... .++.++|||||||++|||+||+.||....+ ...+
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (322)
T 3soc_A 183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDM 262 (322)
T ss_dssp TTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHH
T ss_pred cccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhh
Confidence 22 1224578899999987652 345688999999999999999999864321 1111
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.......... .... ...........+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 263 ~~~~~~~~~~-~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 263 QEVVVHKKKR-PVLR----DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHTTSCCC-CCCC----GGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhcccCC-CCcc----ccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1111111110 0011 1111224456689999999999999999999999999998754
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=340.87 Aligned_cols=248 Identities=20% Similarity=0.303 Sum_probs=206.5
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...+++.||+|++.......+++.+|++++++++||||+++++++.+.+..++||||+++|+|.+
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 94 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHH
Confidence 47899999999999998889999999998877778899999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----ccccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD----QSFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~----~~~~~ 506 (626)
++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... .....
T Consensus 95 ~l~~--~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 168 (269)
T 4hcu_A 95 YLRT--QRGLFAAETLLGMCLDVCEGMAYLE----EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 168 (269)
T ss_dssp HHHT--TTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTT
T ss_pred HHHh--cCcccCHHHHHHHHHHHHHHHHHHH----hCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcc
Confidence 9964 2346899999999999999999999 579999999999999999999999999998754322 12233
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++|||+| |+.||... ...+............ . +......+
T Consensus 169 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~-~~~~~~~~~~~~~~~~---~--------~~~~~~~~ 236 (269)
T 4hcu_A 169 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SNSEVVEDISTGFRLY---K--------PRLASTHV 236 (269)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTTCCCC---C--------CTTSCHHH
T ss_pred cccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHHhcCccCC---C--------CCcCCHHH
Confidence 4567999999888888999999999999999999 88888643 3333333332221110 0 11112347
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 237 ~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 237 YQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 8899999999999999999999999998764
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=357.78 Aligned_cols=251 Identities=18% Similarity=0.277 Sum_probs=202.6
Q ss_pred cccccccCCCcceEEEEe--------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 350 PAELLGRGKHGSLYRVVL--------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~--------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
..+.||+|+||.||+|.. .++..||||+++.... ..+.+.+|+++++++ +||||+++++++...+..|+
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 357899999999999984 2456899999976542 235789999999999 89999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 419 VYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
||||+++|+|.+++..... ...+++..++.++.|++.||.||| +++|+||||||+|||++.++
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~ 240 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA----SQKCIHRDLAARNVLVTENN 240 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTC
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCeeccccchhhEEECCCC
Confidence 9999999999999975321 235899999999999999999999 57999999999999999999
Q ss_pred CeEEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 486 EPCISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
.+||+|||+++..... .....++..|++||......++.++|||||||++|||+| |+.||... +..+....+.
T Consensus 241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~-~~~~~~~~~~ 319 (370)
T 2psq_A 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLK 319 (370)
T ss_dssp CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHHHHH
T ss_pred CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHh
Confidence 9999999998754322 122345667999999888889999999999999999999 88888643 3333333322
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
... ... .+......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 320 ~~~-~~~----------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 320 EGH-RMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp TTC-CCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCC-CCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 221 111 1112234588899999999999999999999999998653
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=340.61 Aligned_cols=249 Identities=21% Similarity=0.333 Sum_probs=205.1
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...++..||+|+++......+++.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHH
Confidence 47899999999999999888899999998877778899999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----ccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS----FLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~----~~~ 506 (626)
++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........ ...
T Consensus 93 ~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 166 (268)
T 3sxs_A 93 YLRSH--GKGLEPSQLLEMCYDVCEGMAFLE----SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK 166 (268)
T ss_dssp HHHHH--GGGCCHHHHHHHHHHHHHHHHHHH----HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCC
T ss_pred HHHHc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCC
Confidence 99642 346899999999999999999999 57999999999999999999999999999875433221 123
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++|||+| |+.||..... .+............ . +......+
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~~---~--------~~~~~~~l 234 (268)
T 3sxs_A 167 FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-SEVVLKVSQGHRLY---R--------PHLASDTI 234 (268)
T ss_dssp CCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-HHHHHHHHTTCCCC---C--------CTTSCHHH
T ss_pred cCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-HHHHHHHHcCCCCC---C--------CCcChHHH
Confidence 4456999999887778999999999999999999 9999864332 22222222221110 0 01112347
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+++.+||+.||++|||+.|+++.|+.+++..
T Consensus 235 ~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 235 YQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 88999999999999999999999999997653
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=350.24 Aligned_cols=251 Identities=21% Similarity=0.282 Sum_probs=201.5
Q ss_pred cccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
..+.||+|+||.||+|... .+..||||+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 3578999999999999963 355699999976432 2357899999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.++++. ....+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 133 ~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 133 ENGSLDTFLRT--HDGQFTIMQLVGMLRGVGAGMRYLS----DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp TTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred CCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 99999999964 2346999999999999999999999 5799999999999999999999999999987543321
Q ss_pred -----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 -----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 -----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
....++..|++||......++.++|||||||++|||++ |+.||.... ..+....+...... .
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-~~~~~~~~~~~~~~-~---------- 274 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT-NRDVISSVEEGYRL-P---------- 274 (325)
T ss_dssp CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC-HHHHHHHHHTTCCC-C----------
T ss_pred ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC-HHHHHHHHHcCCCC-C----------
Confidence 11223557999999887788999999999999999999 999986432 22333332222111 0
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
.+......+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 275 ~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 275 APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 111223458889999999999999999999999999876544
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=342.50 Aligned_cols=240 Identities=20% Similarity=0.327 Sum_probs=198.0
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|. ..+++.||||++.... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCH
Confidence 4789999999999998 4679999999986544 4567789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... ....
T Consensus 105 ~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 176 (297)
T 3fxz_A 105 TDVVTE----TCMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (297)
T ss_dssp HHHHHH----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred HHHHhh----cCCCHHHHHHHHHHHHHHHHHHH----hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCc
Confidence 999964 25899999999999999999999 579999999999999999999999999998654322 2334
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++|||||||++|||+||+.||.......... ........ ... .+......+
T Consensus 177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~~~~~~~-~~~--------~~~~~~~~~ 246 (297)
T 3fxz_A 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTP-ELQ--------NPEKLSAIF 246 (297)
T ss_dssp CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHHCSC-CCS--------CGGGSCHHH
T ss_pred cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhCCCC-CCC--------CccccCHHH
Confidence 67889999999988888999999999999999999999997554333222 22211111 000 011123347
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+++.+||+.||++|||++|+++
T Consensus 247 ~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 247 RDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhHCcCHHHHhh
Confidence 88999999999999999999986
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=366.18 Aligned_cols=249 Identities=21% Similarity=0.370 Sum_probs=205.4
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...++..||||+++......++|.+|++++++++|||||++++++. .+..++||||+++|+|.+
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~ 271 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLD 271 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHH
Confidence 4789999999999999988899999999877777889999999999999999999999875 667899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
+++.. ....+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++...... ....
T Consensus 272 ~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 346 (454)
T 1qcf_A 272 FLKSD-EGSKQPLPKLIDFSAQIAEGMAFIE----QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 346 (454)
T ss_dssp HHHSH-HHHTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSS
T ss_pred HHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCc
Confidence 99642 1235889999999999999999999 5799999999999999999999999999987643221 1223
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++|||||||++|||+| |+.||... +..+....+...... . .+..++..+
T Consensus 347 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~-~~~~~~~~i~~~~~~-~----------~~~~~~~~l 414 (454)
T 1qcf_A 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-SNPEVIRALERGYRM-P----------RPENCPEEL 414 (454)
T ss_dssp SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHHHTCCC-C----------CCTTSCHHH
T ss_pred ccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCCCC-C----------CCCCCCHHH
Confidence 4567999999888889999999999999999999 99998643 333333333222111 0 111233458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+++.+||+.||++|||+++|++.|+.+....
T Consensus 415 ~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 415 YNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999987543
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-41 Score=364.37 Aligned_cols=247 Identities=19% Similarity=0.320 Sum_probs=201.6
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCC-eEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ-EKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~-~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|... |+.||||.++... ..+.|.+|++++++++||||+++++++...+ ..++||||+++|+|.
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~ 275 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHH
Confidence 478999999999999975 7899999998644 5578999999999999999999999987765 789999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTS 509 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~ 509 (626)
++++.. ....+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++..........++.
T Consensus 276 ~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 350 (450)
T 1k9a_A 276 DYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 350 (450)
T ss_dssp HHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCT
T ss_pred HHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCc
Confidence 999742 2235799999999999999999999 57999999999999999999999999999876544333345677
Q ss_pred ccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHH
Q 006903 510 SLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQV 588 (626)
Q Consensus 510 ~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 588 (626)
.|++||......++.++|||||||++|||+| |+.||... +..+....+.... ... .+..+...+.++
T Consensus 351 ~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~-~~~~~~~~i~~~~-~~~----------~p~~~~~~l~~l 418 (450)
T 1k9a_A 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGY-KMD----------APDGCPPAVYDV 418 (450)
T ss_dssp TTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS-CTTTHHHHHHTTC-CCC----------CCTTCCHHHHHH
T ss_pred ceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCC-CCC----------CCCcCCHHHHHH
Confidence 8999999988889999999999999999999 99998643 2223333322221 111 112233458899
Q ss_pred HhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 589 ALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 589 ~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+.+||+.||++|||+.++++.|+.+...
T Consensus 419 i~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 419 MKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999998754
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=361.84 Aligned_cols=248 Identities=20% Similarity=0.293 Sum_probs=200.9
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||||.++.... ..++|.+|++++++++||||+++++++..++..++||||+++|+
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 198 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCC
Confidence 578999999999999965 789999999975432 12468899999999999999999999999899999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS---- 503 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~---- 503 (626)
|.++++. .+..+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 199 L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~ 272 (377)
T 3cbl_A 199 FLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLE----SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272 (377)
T ss_dssp HHHHHHH--HGGGCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred HHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence 9999963 2346899999999999999999999 57999999999999999999999999999875433211
Q ss_pred -ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 504 -FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 504 -~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
...++..|++||......++.++|||||||++|||+| |+.||.... ..+....+.... ... .+..+
T Consensus 273 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~-~~~~~~~~~~~~-~~~----------~~~~~ 340 (377)
T 3cbl_A 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS-NQQTREFVEKGG-RLP----------CPELC 340 (377)
T ss_dssp SCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC-HHHHHHHHHTTC-CCC----------CCTTC
T ss_pred CCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCC-CCC----------CCCCC
Confidence 1223557999999887778999999999999999999 888886432 222222222111 111 11122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+..+.+++.+||+.||++|||++++++.|++++..
T Consensus 341 ~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 341 PDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 34588899999999999999999999999998754
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=339.50 Aligned_cols=248 Identities=18% Similarity=0.271 Sum_probs=203.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||++...++..||||+++......+++.+|++++++++||||+++++++.+.+..++||||+++|+|.+
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 108 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHH
Confidence 47899999999999999888899999998877778899999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 109 ~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 182 (283)
T 3gen_A 109 YLREM--RHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 182 (283)
T ss_dssp HHHCG--GGCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTT
T ss_pred HHHHh--ccCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCc
Confidence 99642 346999999999999999999999 5799999999999999999999999999986543221 1223
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++|||+| |+.||.... ..+....+....... . +......+
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~-~~~~~~~~~~~~~~~---~--------~~~~~~~l 250 (283)
T 3gen_A 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-NSETAEHIAQGLRLY---R--------PHLASEKV 250 (283)
T ss_dssp SCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC-HHHHHHHHHTTCCCC---C--------CTTCCHHH
T ss_pred cCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC-hhHHHHHHhcccCCC---C--------CCcCCHHH
Confidence 4567999999888888999999999999999999 999987433 223333322221110 0 01112357
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+++.+||+.||++|||++|+++.|+++.++
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 251 YTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 8899999999999999999999999998754
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-41 Score=356.59 Aligned_cols=249 Identities=20% Similarity=0.301 Sum_probs=193.3
Q ss_pred cccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
..+.||+|+||.||+|+.. ++..||||+++.... ..++|.+|++++++++||||+++++++...+..++||||+
T Consensus 49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCC
Confidence 3578999999999999854 578899999976432 2357999999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS 503 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~ 503 (626)
++|+|.++++. ....+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 129 ~~~sL~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 129 ENGSLDSFLRK--HDAQFTVIQLVGMLRGIASGMKYLS----DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp TTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 99999999974 3356999999999999999999999 57999999999999999999999999999875432211
Q ss_pred ------ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 504 ------FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 504 ------~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
...++..|++||......++.++|||||||++|||++ |+.||... +..+....+.... ...
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~-~~~~~~~~i~~~~-~~~---------- 270 (373)
T 2qol_A 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEGY-RLP---------- 270 (373)
T ss_dssp -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC-CHHHHHHHHHTTE-ECC----------
T ss_pred cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCC-CCC----------
Confidence 1123457999999888889999999999999999998 99998643 2233333222211 100
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++||++.||++.|+++...
T Consensus 271 ~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 1112234588999999999999999999999999998654
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=341.46 Aligned_cols=256 Identities=25% Similarity=0.450 Sum_probs=203.9
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||+|+||.||+|.. +++.||||++.... ...+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 37 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 115 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115 (307)
T ss_dssp CEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred CccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCC
Confidence 6799999999999987 58899999987532 12467899999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-----
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD----- 501 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~----- 501 (626)
+|.+++........+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 116 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 191 (307)
T 2nru_A 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH----ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191 (307)
T ss_dssp BHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEE
T ss_pred cHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecCCCCHHHEEEcCCCcEEEeeccccccccccccccc
Confidence 99999975444567999999999999999999999 579999999999999999999999999998654321
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc---hhHHHHHHhhccc-ccccccHHHHhhhc
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN---LATWVHSVVREEW-TVEVFDEVLIAEAA 577 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~---~~~~~~~~~~~~~-~~~~~d~~~~~~~~ 577 (626)
.....++..|++||.... .++.++||||||+++|||+||+.||..... ...+......... ..+.++..+ ...
T Consensus 192 ~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 268 (307)
T 2nru_A 192 TSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM--NDA 268 (307)
T ss_dssp CSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC--SCC
T ss_pred ccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc--ccc
Confidence 122457888999998764 368899999999999999999999874322 1222222211111 011111111 113
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
.......+.+++.+||+.||++|||+.++++.|+++..
T Consensus 269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 34566779999999999999999999999999998864
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=341.57 Aligned_cols=250 Identities=20% Similarity=0.325 Sum_probs=193.7
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|... ++.||||++... ...+.+.+|++++++++||||+++++++. +..++||||+++|+|.+
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~ 88 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN 88 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHH
Confidence 478999999999999975 788999998643 34567999999999999999999999876 45899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC-eEEeeccCccccCCCcccccccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME-PCISEYGLIVTENHDQSFLAQTS 509 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~-~kl~DFGl~~~~~~~~~~~~~~~ 509 (626)
++........+++..++.++.|+++||.|||+. +.++|+||||||+|||++.++. +||+|||++...........++.
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~ 167 (307)
T 2eva_A 89 VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM-QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSA 167 (307)
T ss_dssp HHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTC-SSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCT
T ss_pred HHhccCCCCccCHHHHHHHHHHHHHHHHHHHhC-CCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCC
Confidence 997544334688999999999999999999942 1278999999999999998887 79999999876544444456788
Q ss_pred ccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc-hhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHH
Q 006903 510 SLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN-LATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQV 588 (626)
Q Consensus 510 ~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 588 (626)
.|++||......++.++|||||||++|||+||+.||..... ............ .... .......+.++
T Consensus 168 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~l~~l 236 (307)
T 2eva_A 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-RPPL----------IKNLPKPIESL 236 (307)
T ss_dssp TSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTC-CCCC----------BTTCCHHHHHH
T ss_pred ceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCC-CCCc----------ccccCHHHHHH
Confidence 99999999888889999999999999999999999974322 111111111111 1111 11123357889
Q ss_pred HhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 589 ALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 589 ~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+.+||+.||++|||++|+++.|+.+...
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~~~ 264 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRY 264 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999988654
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-41 Score=347.75 Aligned_cols=239 Identities=18% Similarity=0.273 Sum_probs=198.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~ 99 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCC
Confidence 47899999999999995 67999999999765433 346889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC--Cccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--DQSF 504 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--~~~~ 504 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++..... ....
T Consensus 100 ~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 172 (328)
T 3fe3_A 100 EVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCH----QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA 172 (328)
T ss_dssp BHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGT
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccc
Confidence 99999963 246899999999999999999999 57999999999999999999999999999865432 2234
Q ss_pred cccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 505 LAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
..+++.|++||......+ +.++|||||||++|||+||+.||... +..+....+........ .....
T Consensus 173 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~p------------~~~s~ 239 (328)
T 3fe3_A 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLRGKYRIP------------FYMST 239 (328)
T ss_dssp TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCC------------TTSCH
T ss_pred ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCC------------CCCCH
Confidence 568889999999877665 47999999999999999999999743 44444444443322111 11123
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 240 DCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 47789999999999999999999763
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-41 Score=367.13 Aligned_cols=250 Identities=23% Similarity=0.337 Sum_probs=205.9
Q ss_pred cccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 350 PAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
..+.||+|+||.||+|... ++..||||.++......++|.+|++++++++|||||++++++...+..++||||+++|+|
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 3578999999999999965 488999999987777788999999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SF 504 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~ 504 (626)
.++++.. ....+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 304 ~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 378 (495)
T 1opk_A 304 LDYLREC-NRQEVSAVVLLYMATQISSAMEYLE----KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378 (495)
T ss_dssp HHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTT
T ss_pred HHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCC
Confidence 9999743 2356899999999999999999999 5799999999999999999999999999987643322 11
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
..++..|++||......++.++|||||||++|||+| |+.||... +..+....+... .... .+..+..
T Consensus 379 ~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~-~~~~~~~~~~~~-~~~~----------~~~~~~~ 446 (495)
T 1opk_A 379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKD-YRME----------RPEGCPE 446 (495)
T ss_dssp CCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHHHHHTT-CCCC----------CCTTCCH
T ss_pred CcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcC-CCCC----------CCCCCCH
Confidence 234567999999887788999999999999999999 88888643 333333222221 1111 1112234
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+.+++.+||+.||++|||+.+|++.|+.+...
T Consensus 447 ~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 447 KVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 588899999999999999999999999988643
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=335.22 Aligned_cols=245 Identities=22% Similarity=0.360 Sum_probs=197.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC--H------HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS--S------EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~--~------~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .+++.||||++...... . +.+.+|++++++++||||+++++++.+.. ++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e 101 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVME 101 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEE
Confidence 47899999999999995 57899999998754421 1 57899999999999999999999886554 79999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeCCCCC-----eEEeeccC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFNNNME-----PCISEYGL 494 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~~~~-----~kl~DFGl 494 (626)
|+++|+|.+++.. ....+++..++.++.|++.||+||| +.+ |+||||||+|||++.++. +||+|||+
T Consensus 102 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 102 FVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQ----NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp CCTTCBHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHH----TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred ecCCCCHHHHHhc--ccCCccHHHHHHHHHHHHHHHHHHH----hCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 9999999998864 3457999999999999999999999 567 999999999999988776 99999999
Q ss_pred ccccCCCccccccccccchhhcc--ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcch-hHHHHHHhhcccccccccHH
Q 006903 495 IVTENHDQSFLAQTSSLKINDIS--NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNL-ATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~pe~~--~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 571 (626)
++..........++..|++||.. ....++.++|||||||++|||++|+.||...... ...............
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~----- 250 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT----- 250 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC-----
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC-----
Confidence 98665555556788899999987 3445688999999999999999999999743221 122222222221111
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
........+.+++.+||+.||++|||++|+++.|+++
T Consensus 251 -----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 251 -----IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -----CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1112234588999999999999999999999999864
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=344.96 Aligned_cols=243 Identities=17% Similarity=0.264 Sum_probs=200.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|.. .+++.||+|.+.......+.+.+|+++++.++||||+++++++.+.+..++||||+++|+|.
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF 89 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHH
Confidence 47899999999999985 46899999999765555567899999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC--CCCeEEeeccCccccCCCc--ccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN--NMEPCISEYGLIVTENHDQ--SFL 505 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGl~~~~~~~~--~~~ 505 (626)
+++.. ....+++..+..++.|++.||.||| +.||+||||||+|||++. ++.+||+|||++....... ...
T Consensus 90 ~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH----~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 163 (321)
T 1tki_A 90 ERINT--SAFELNEREIVSYVHQVCEALQFLH----SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL 163 (321)
T ss_dssp HHHTS--SSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEE
T ss_pred HHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccc
Confidence 99963 2346899999999999999999999 579999999999999997 7899999999987643322 334
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.+++.|++||......++.++|||||||++|||++|+.||.... ..+....+....... +.... ......+
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~---~~~~~-----~~~s~~~ 234 (321)
T 1tki_A 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-NQQIIENIMNAEYTF---DEEAF-----KEISIEA 234 (321)
T ss_dssp ESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHHTCCCC---CHHHH-----TTSCHHH
T ss_pred cCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-HHHHHHHHHcCCCCC---Chhhh-----ccCCHHH
Confidence 67889999999887778999999999999999999999997543 333444443332211 11110 1123357
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+++.+||+.||++|||+.|+++
T Consensus 235 ~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 235 MDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHhc
Confidence 89999999999999999999987
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=342.17 Aligned_cols=252 Identities=24% Similarity=0.336 Sum_probs=192.1
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhcc--CCCCCccccceEEEeC----CeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDH--VKHPNVLPPLAYYCSK----QEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~--l~H~nIv~l~g~~~~~----~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++... ...++||||++
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 47899999999999987 6899999998653 34456666666555 8999999999987653 45799999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc----cCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL----REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
+|+|.++++. ..+++..++.++.|++.||+|||... ++++|+||||||+|||++.++.+||+|||+++....
T Consensus 90 ~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 165 (301)
T 3q4u_A 90 MGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165 (301)
T ss_dssp TCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred CCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccc
Confidence 9999999952 46899999999999999999999321 146899999999999999999999999999865322
Q ss_pred Cc-------cccccccccchhhccccC------CCCCcchhHHHHHHHHHHHcC----------CCCCCCCcc---hhHH
Q 006903 501 DQ-------SFLAQTSSLKINDISNQM------CSTIKADVYGFGVILLELLTG----------KLVQNNGFN---LATW 554 (626)
Q Consensus 501 ~~-------~~~~~~~~~~~pe~~~~~------~~~~k~DVwSfGvvl~elltg----------~~p~~~~~~---~~~~ 554 (626)
.. ....++..|++||..... .++.++|||||||++|||+|| +.||..... ....
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~ 245 (301)
T 3q4u_A 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFED 245 (301)
T ss_dssp TTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred ccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhh
Confidence 21 123678899999987665 334689999999999999999 777753221 1112
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.............. ............+.+++.+||+.||++|||+.||++.|+++
T Consensus 246 ~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 246 MRKVVCVDQQRPNI----PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp HHHHHTTSCCCCCC----CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred hhHHHhccCCCCCC----ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 22222111111111 11112334566799999999999999999999999999976
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=361.82 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=201.9
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...++..||||+++......++|.+|++++++++||||+++++++.. +..++||||+++|+|.+
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~ 267 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLD 267 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHH
Confidence 47899999999999999888889999998776777899999999999999999999998765 67899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
+++.. ....+++..++.++.|++.||+||| +++|+||||||+|||+++++.+||+|||+++...... ....
T Consensus 268 ~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 342 (452)
T 1fmk_A 268 FLKGE-TGKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342 (452)
T ss_dssp HHSHH-HHTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------
T ss_pred HHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCc
Confidence 99631 2246899999999999999999999 5799999999999999999999999999987543221 1223
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++|||||||++|||+| |+.||... ...+....+.... ... .+..++..+
T Consensus 343 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~-~~~~~~~~i~~~~-~~~----------~~~~~~~~l 410 (452)
T 1fmk_A 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGY-RMP----------CPPECPESL 410 (452)
T ss_dssp CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-CHHHHHHHHHTTC-CCC----------CCTTSCHHH
T ss_pred ccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCC-CCC----------CCCCCCHHH
Confidence 4567999999888888999999999999999999 88888643 3333333332221 111 112233458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+++.+||+.||++|||++++++.|+.+....
T Consensus 411 ~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 411 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 88999999999999999999999999987543
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-40 Score=332.15 Aligned_cols=248 Identities=20% Similarity=0.289 Sum_probs=205.9
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...+++.||+|++.......+++.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD 92 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHH
Confidence 47899999999999998888999999998877777899999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----ccccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD----QSFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~----~~~~~ 506 (626)
++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... .....
T Consensus 93 ~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 166 (267)
T 3t9t_A 93 YLRTQ--RGLFAAETLLGMCLDVCEGMAYLE----EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 166 (267)
T ss_dssp HHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTT
T ss_pred HHhhC--cccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCchheEEECCCCCEEEccccccccccccccccccccc
Confidence 99742 346899999999999999999999 579999999999999999999999999998654321 12233
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++|||+| |+.||... ...+....+...... . .+......+
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~~~~~i~~~~~~-~----------~~~~~~~~l 234 (267)
T 3t9t_A 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SNSEVVEDISTGFRL-Y----------KPRLASTHV 234 (267)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTTCCC-C----------CCTTSCHHH
T ss_pred ccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC-CHHHHHHHHhcCCcC-C----------CCccCcHHH
Confidence 4567999999887888999999999999999999 88888643 333333333222110 0 011122357
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 235 ~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 235 YQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 8899999999999999999999999998753
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=347.49 Aligned_cols=254 Identities=21% Similarity=0.295 Sum_probs=202.1
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|+.. +++.||||.++.... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 131 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEec
Confidence 478999999999999863 458999999976542 235789999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee
Q 006903 423 QPNGSLFNLLHGSEN---------------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF 481 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl 481 (626)
+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||||||+|||+
T Consensus 132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS----ERKFVHRDLATRNCLV 207 (343)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEE
T ss_pred CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEE
Confidence 999999999975321 256899999999999999999999 5799999999999999
Q ss_pred CCCCCeEEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHH
Q 006903 482 NNNMEPCISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWV 555 (626)
Q Consensus 482 ~~~~~~kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~ 555 (626)
+.++.+||+|||++...... .....++..|++||......++.++|||||||++|||+| |+.||... ...+..
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~-~~~~~~ 286 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM-AHEEVI 286 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHHHH
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC-ChHHHH
Confidence 99999999999998643221 122345677999999888888999999999999999999 99898643 333333
Q ss_pred HHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccccc
Q 006903 556 HSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERS 620 (626)
Q Consensus 556 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 620 (626)
..+...... . .+......+.+++.+||+.||++|||+.|+++.|+++.+.....
T Consensus 287 ~~~~~~~~~-~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~~ 340 (343)
T 1luf_A 287 YYVRDGNIL-A----------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGT 340 (343)
T ss_dssp HHHHTTCCC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-----
T ss_pred HHHhCCCcC-C----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhhh
Confidence 333222111 1 11122345888999999999999999999999999998765443
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-40 Score=339.04 Aligned_cols=241 Identities=18% Similarity=0.255 Sum_probs=198.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 50 ~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 129 (321)
T 2c30_A 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129 (321)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred cEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence 468999999999999965 79999999997654 3456799999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... ....
T Consensus 130 ~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 201 (321)
T 2c30_A 130 TDIVSQ----VRLNEEQIATVCEAVLQALAYLH----AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL 201 (321)
T ss_dssp HHHHTT----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred HHHHHh----cCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccc
Confidence 999853 35899999999999999999999 579999999999999999999999999998654322 2334
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++|||||||++|||+||+.||..... .+....+...... .... .......+
T Consensus 202 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~-~~~~--------~~~~~~~l 271 (321)
T 2c30_A 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-VQAMKRLRDSPPP-KLKN--------SHKVSPVL 271 (321)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHSSCC-CCTT--------GGGSCHHH
T ss_pred cCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCCCC-CcCc--------cccCCHHH
Confidence 678899999999888889999999999999999999999975432 2222222221110 0000 01122347
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+++.+||+.||++|||+.|+++.
T Consensus 272 ~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 272 RDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHccCChhhCcCHHHHhcC
Confidence 889999999999999999999874
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=338.37 Aligned_cols=252 Identities=16% Similarity=0.240 Sum_probs=200.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+++.||+|.+...... .+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 95 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence 47899999999999984 56899999998654322 25688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---- 501 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 96 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 96 PTLSEYIES---HGPLSVDTAINFTNQILDGIKHAH----DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp CBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 999999963 246899999999999999999999 579999999999999999999999999998754322
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....++..|++||......++.++|||||||++|||+||+.||.......... ........ .. . .......
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-~~~~~~~~-~~-~-----~~~~~~~ 240 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI-KHIQDSVP-NV-T-----TDVRKDI 240 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH-HHHSSCCC-CH-H-----HHSCTTS
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhhccCC-Cc-c-----hhcccCC
Confidence 123457889999999888888999999999999999999999997544332222 22221111 00 0 0111223
Q ss_pred HHHHHHHHhhccCCCCCCCC-CHHHHHHHHHhhhhcc
Q 006903 582 MLKLLQVALRCINQSPNERP-SMNQVAVMINNIKEEE 617 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RP-s~~ev~~~L~~i~~~~ 617 (626)
+..+.+++.+||+.||++|| +++++.+.|+.+..+.
T Consensus 241 ~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 241 PQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred CHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 34588899999999999998 9999999999886543
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=345.44 Aligned_cols=243 Identities=19% Similarity=0.275 Sum_probs=199.3
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
..+.||+|+||.||+|.. .+|+.||+|.++.... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 16 ~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEE
Confidence 357899999999999995 4699999999975432 24689999999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC----CeEEeeccCccc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM----EPCISEYGLIVT 497 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGl~~~ 497 (626)
|+++|+|.+++.. ...+++..+..++.||+.||.||| +.||+||||||+|||+++++ .+||+|||++..
T Consensus 96 ~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 96 LVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp CCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 9999999999953 357999999999999999999999 57999999999999998877 799999999875
Q ss_pred cCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 498 ENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 498 ~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.... .....+++.|++||......++.++|||||||++|||++|+.||... +..+....+...... +++...
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~-~~~~~~~~i~~~~~~---~~~~~~-- 242 (361)
T 2yab_A 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANITAVSYD---FDEEFF-- 242 (361)
T ss_dssp CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHTTCCC---CCHHHH--
T ss_pred cCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcCCC---CCchhc--
Confidence 4332 23456889999999998888999999999999999999999999754 333333333332211 111111
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++.+||+.||++|||+.|+++
T Consensus 243 ---~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 243 ---SQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---cCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 112234788999999999999999999975
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-40 Score=342.12 Aligned_cols=239 Identities=18% Similarity=0.252 Sum_probs=198.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCC----CCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDW----SISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+|+.||+|+++.. ....+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~g 89 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 47899999999999995 46999999999753 23456789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|.+++.. ...+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||+++... ...
T Consensus 90 g~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 162 (337)
T 1o6l_A 90 GELFFHLSR---ERVFTEERARFYGAEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 162 (337)
T ss_dssp CBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcc
Confidence 999999963 346899999999999999999999 5799999999999999999999999999987532 222
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....+++.|++||+.....++.++|||||||++|||++|+.||... +..+....+....... +....
T Consensus 163 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~s 229 (337)
T 1o6l_A 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-DHERLFELILMEEIRF------------PRTLS 229 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTTSC
T ss_pred cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCCC------------CCCCC
Confidence 3456889999999998888899999999999999999999999753 3333333333322110 11122
Q ss_pred HHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERP-----SMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RP-----s~~ev~~~ 609 (626)
..+.+++.+||+.||++|| +++|+++.
T Consensus 230 ~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 3478899999999999999 89998763
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-41 Score=351.64 Aligned_cols=251 Identities=19% Similarity=0.278 Sum_probs=199.5
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCCCC--HHHHHHHHHHhccC-CCCCccccceEEEeCCe-EEEEE
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSIS--SEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQE-KLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~-~~lv~ 420 (626)
.+.||+|+||.||+|+. .+++.||||+++..... .+.+.+|++++.++ +||||+++++++...+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 57899999999999973 34689999999764422 35689999999999 79999999999887654 89999
Q ss_pred eecCCCChhHhhcCCCC---------------------------------------------------------------
Q 006903 421 EYQPNGSLFNLLHGSEN--------------------------------------------------------------- 437 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~--------------------------------------------------------------- 437 (626)
||+++|+|.++++....
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 99999999999975332
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-----cccccccccc
Q 006903 438 GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLK 512 (626)
Q Consensus 438 ~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~ 512 (626)
...+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++...... ....++..|+
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~ 262 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 262 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGC
T ss_pred ccccCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeE
Confidence 112899999999999999999999 5799999999999999999999999999987542221 2234567899
Q ss_pred hhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhh
Q 006903 513 INDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALR 591 (626)
Q Consensus 513 ~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~ 591 (626)
+||......++.++|||||||++|||+| |+.||................. .... +......+.+++.+
T Consensus 263 aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~l~~li~~ 331 (359)
T 3vhe_A 263 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRA----------PDYTTPEMYQTMLD 331 (359)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC-CCCC----------CTTCCHHHHHHHHH
T ss_pred ChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCC-CCCC----------CCCCCHHHHHHHHH
Confidence 9999888888999999999999999999 9999875433222222222211 1111 11122358889999
Q ss_pred ccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 592 CINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 592 Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
||+.||++|||+.|++++|+++...
T Consensus 332 ~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 332 CWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HccCChhhCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999998754
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-40 Score=336.22 Aligned_cols=258 Identities=19% Similarity=0.282 Sum_probs=204.7
Q ss_pred hhhhhcccccccccCCCcceEEEEe-CC---CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeE
Q 006903 343 FEDLLRAPAELLGRGKHGSLYRVVL-DD---GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEK 416 (626)
Q Consensus 343 ~~~l~~~~~~~lG~G~fG~Vy~~~~-~~---g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~ 416 (626)
.+.+.....+.||+|+||.||+|.. .+ +..||+|.+..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 18 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (298)
T 3pls_A 18 HERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGL 97 (298)
T ss_dssp GGGEEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ccceEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCC
Confidence 3444444568899999999999984 23 33799999976443 235788999999999999999999999876655
Q ss_pred -EEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 417 -LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 417 -~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
++||||+.+|+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 98 ~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~ 171 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLA----EQKFVHRDLAARNCMLDESFTVKVADFGLA 171 (298)
T ss_dssp CEEEECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTCCEEECCTTSS
T ss_pred cEEEEecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCcEEeCcCCCc
Confidence 999999999999999974 3457899999999999999999999 579999999999999999999999999998
Q ss_pred cccCC-------CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 496 VTENH-------DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 496 ~~~~~-------~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
+.... ......++..|++||......++.++|||||||++|||+||..|+....+..+............
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--- 248 (298)
T 3pls_A 172 RDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP--- 248 (298)
T ss_dssp CTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC---
T ss_pred ccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCC---
Confidence 64322 12233457789999999888889999999999999999997777655544444433333222111
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+......+.+++.+||+.||++|||++++++.|+++....
T Consensus 249 --------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 249 --------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 01112235888999999999999999999999999987654
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-40 Score=338.98 Aligned_cols=238 Identities=21% Similarity=0.253 Sum_probs=200.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+|+.||+|+++... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~g 90 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCC
Confidence 47899999999999995 479999999987532 3456788999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.........
T Consensus 91 g~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~ 163 (318)
T 1fot_A 91 GELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLH----SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL 163 (318)
T ss_dssp CBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCC
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChheEEEcCCCCEEEeecCcceecCCccccc
Confidence 999999964 346899999999999999999999 7899999999999999999999999999998765555556
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.+++.|++||+.....++.++|||||||++|||++|+.||.... ..+....+....... +......+
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~------------p~~~~~~~ 230 (318)
T 1fot_A 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-TMKTYEKILNAELRF------------PPFFNEDV 230 (318)
T ss_dssp CSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHHCCCCC------------CTTSCHHH
T ss_pred cCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCCC------------CCCCCHHH
Confidence 78999999999988888999999999999999999999997543 333333443332110 01112347
Q ss_pred HHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 586 LQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
.+++.+||+.||++|| +++|+++
T Consensus 231 ~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 231 KDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 8899999999999999 8888875
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-40 Score=338.59 Aligned_cols=260 Identities=18% Similarity=0.241 Sum_probs=204.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCC--eEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ--EKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~--~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +++.||||+++... ...+.+.+|++++++++||||+++++++...+ ..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 478999999999999954 58999999997544 34577889999999999999999999988765 67999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee----CCCCCeEEeeccCccccCCC
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF----NNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+|.+++........+++..++.++.|++.||.||| +.+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 94 ~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 94 GSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR----ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp CBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 999999976444445999999999999999999999 5799999999999999 78888999999998764332
Q ss_pred c--cccccccccchhhccc--------cCCCCCcchhHHHHHHHHHHHcCCCCCCCC---cchhHHHHHHhhcccccc--
Q 006903 502 Q--SFLAQTSSLKINDISN--------QMCSTIKADVYGFGVILLELLTGKLVQNNG---FNLATWVHSVVREEWTVE-- 566 (626)
Q Consensus 502 ~--~~~~~~~~~~~pe~~~--------~~~~~~k~DVwSfGvvl~elltg~~p~~~~---~~~~~~~~~~~~~~~~~~-- 566 (626)
. ....++..|++||... ...++.++|||||||++|||+||+.||... ....+.+..+........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (319)
T 4euu_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (319)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCE
T ss_pred CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccch
Confidence 2 3345788999999865 456789999999999999999999998632 222333333332211000
Q ss_pred --------c--ccHHH-HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 567 --------V--FDEVL-IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 567 --------~--~d~~~-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
. +.... ............+.+++.+||+.||++|||++|+++...+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred hhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 0 00000 011233556667889999999999999999999999887654
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-40 Score=330.94 Aligned_cols=246 Identities=22% Similarity=0.324 Sum_probs=198.3
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+.. ++.||||+++..... .+.+.+|++++++++||||+++++++... +..++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 478999999999999985 889999999865533 35689999999999999999999999877 778999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~ 503 (626)
|+|.+++... ....+++..++.++.|++.||.||| +.+ |+||||||+||+++.++.++|+|||++..... .
T Consensus 94 ~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH----~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~--~ 166 (271)
T 3kmu_A 94 GSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLH----TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS--P 166 (271)
T ss_dssp CBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHT----TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--T
T ss_pred CcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHh----cCCCceecCCCccceEEEcCCcceeEEeccceeeecc--c
Confidence 9999999753 2336899999999999999999999 567 99999999999999999999999988654322 2
Q ss_pred ccccccccchhhccccCCCC---CcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 504 FLAQTSSLKINDISNQMCST---IKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~---~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
...++..|++||......++ .++|||||||++|||+||+.||..... .+.............. +..
T Consensus 167 ~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~----------~~~ 235 (271)
T 3kmu_A 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN-MEIGMKVALEGLRPTI----------PPG 235 (271)
T ss_dssp TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH-HHHHHHHHHSCCCCCC----------CTT
T ss_pred CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh-HHHHHHHHhcCCCCCC----------CCC
Confidence 23567889999987654443 379999999999999999999975433 2222222222211111 111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
....+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 236 ISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 23358889999999999999999999999999864
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=349.97 Aligned_cols=250 Identities=18% Similarity=0.252 Sum_probs=200.3
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.+. +++.||||+++.... ...++.+|+.++++++||||+++++++...+..++||||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 478999999999999843 467899999975432 234688999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC---CeEEeeccCc
Q 006903 423 QPNGSLFNLLHGSE----NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM---EPCISEYGLI 495 (626)
Q Consensus 423 ~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGl~ 495 (626)
+++|+|.+++.... ....+++..++.++.|++.||+||| +++|+||||||+|||++.++ .+||+|||++
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE----ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 99999999996432 1246899999999999999999999 67999999999999999554 5999999998
Q ss_pred cccC-----CCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 496 VTEN-----HDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 496 ~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
+... .......++..|++||......++.++|||||||++|||+| |+.||... +..+....+...... .
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~-~~~~~~~~i~~~~~~-~--- 306 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-SNQEVLEFVTSGGRM-D--- 306 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHHTTCCC-C---
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCCCC-C---
Confidence 6421 12223445778999999888889999999999999999998 88888643 333333333322211 0
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++|||+.||++.|+.+...
T Consensus 307 -------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 307 -------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 0112233588899999999999999999999999988654
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=340.09 Aligned_cols=257 Identities=22% Similarity=0.334 Sum_probs=196.6
Q ss_pred ccccccCCCcceEEEEe-----CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-----DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~Ey 422 (626)
.+.||+|+||.||+|++ .+++.||||++..... ..+.+.+|++++++++||||+++++++... ...++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 94 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence 47899999999999984 3689999999976442 235789999999999999999999998654 458999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
+++|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 95 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (295)
T 3ugc_A 95 LPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG----TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168 (295)
T ss_dssp CTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred CCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence 9999999999743 345899999999999999999999 5799999999999999999999999999987543221
Q ss_pred ------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc----HHH
Q 006903 503 ------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD----EVL 572 (626)
Q Consensus 503 ------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d----~~~ 572 (626)
....++..|++||......++.++|||||||++|||+||..|+.... .++........ ...... ..+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP--AEFMRMIGNDK-QGQMIVFHLIELL 245 (295)
T ss_dssp -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHH--HHHHHHHCTTC-CTHHHHHHHHHHH
T ss_pred ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCCh--HHHHhhhcCcc-ccchhHHHHHHHH
Confidence 12235566999999888888999999999999999999998875321 11111111100 000000 000
Q ss_pred Hh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 573 IA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 573 ~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.. ...+......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 246 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 246 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 00 001122345688999999999999999999999999998764
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=338.49 Aligned_cols=243 Identities=21% Similarity=0.296 Sum_probs=198.1
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
..+.||+|+||.||+|.. .+|+.||+|.+..... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEE
Confidence 357899999999999995 4689999999865432 35789999999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC----CeEEeeccCccc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM----EPCISEYGLIVT 497 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGl~~~ 497 (626)
|+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++ .+||+|||++..
T Consensus 95 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 95 LVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp CCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred cCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHH----HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 9999999999953 356999999999999999999999 57999999999999999887 799999999876
Q ss_pred cCC--CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 498 ENH--DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 498 ~~~--~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
... ......+++.|++||......++.++|||||||++|||+||+.||.... ..+....+...... +.....
T Consensus 168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~~~~~~~~---~~~~~~-- 241 (326)
T 2y0a_A 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVSAVNYE---FEDEYF-- 241 (326)
T ss_dssp CCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-HHHHHHHHHHTCCC---CCHHHH--
T ss_pred CCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-HHHHHHHHHhcCCC---cCcccc--
Confidence 432 2234567889999999988888999999999999999999999997543 22333332222111 111110
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++.+||+.||++|||+.|+++
T Consensus 242 ---~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 242 ---SNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 112235788999999999999999999987
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-40 Score=349.07 Aligned_cols=251 Identities=19% Similarity=0.255 Sum_probs=202.7
Q ss_pred cccccccCCCcceEEEEe--------CCCcEEEEEEcCCCCCC--HHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 350 PAELLGRGKHGSLYRVVL--------DDGLMLAVKRLRDWSIS--SEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~--------~~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
..+.||+|+||.||+|+. .++..||||+++..... .+.+.+|+++++++ +||||+++++++...+..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 357899999999999984 23468999999765432 25688999999999 99999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 419 VYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
||||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~ 228 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLAARNVLVTEDN 228 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTC
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCcceEEEcCCC
Confidence 9999999999999975321 245999999999999999999999 57999999999999999999
Q ss_pred CeEEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 486 EPCISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
.+||+|||+++..... .....++..|++||......++.++|||||||++|||+| |+.||... +..+....+.
T Consensus 229 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~-~~~~~~~~~~ 307 (382)
T 3tt0_A 229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLK 307 (382)
T ss_dssp CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHH
T ss_pred cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHH
Confidence 9999999998754322 122345677999999888888999999999999999999 88888643 3333333332
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
..... .. +......+.+++.+||+.||++|||++|+++.|+++...
T Consensus 308 ~~~~~-~~----------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 308 EGHRM-DK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp TTCCC-CC----------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCC-CC----------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 22111 11 111233588899999999999999999999999998754
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-40 Score=342.48 Aligned_cols=240 Identities=18% Similarity=0.290 Sum_probs=190.5
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCC-------------
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ------------- 414 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~------------- 414 (626)
.+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~ 90 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWL 90 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhh
Confidence 478999999999999965 79999999997543 23467999999999999999999999986543
Q ss_pred --------------------------------------------eEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHH
Q 006903 415 --------------------------------------------EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVA 450 (626)
Q Consensus 415 --------------------------------------------~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~ 450 (626)
..++||||+++|+|.+++.........++..++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~ 170 (332)
T 3qd2_B 91 KDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIF 170 (332)
T ss_dssp -----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHH
T ss_pred ccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHH
Confidence 279999999999999999865544567788899999
Q ss_pred HHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---------------ccccccccccchhh
Q 006903 451 ACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---------------QSFLAQTSSLKIND 515 (626)
Q Consensus 451 ~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---------------~~~~~~~~~~~~pe 515 (626)
.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..... .....++..|++||
T Consensus 171 ~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 246 (332)
T 3qd2_B 171 IQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246 (332)
T ss_dssp HHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHH
T ss_pred HHHHHHHHHHH----hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChH
Confidence 99999999999 579999999999999999999999999998754332 12235788999999
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCC
Q 006903 516 ISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQ 595 (626)
Q Consensus 516 ~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~ 595 (626)
......++.++|||||||++|||++|..|+.. ............ . . .........+.+++.+||+.
T Consensus 247 ~~~~~~~~~~~Di~slG~il~el~~~~~~~~~---~~~~~~~~~~~~-~----~------~~~~~~~~~~~~li~~~l~~ 312 (332)
T 3qd2_B 247 QIHGNNYSHKVDIFSLGLILFELLYSFSTQME---RVRIITDVRNLK-F----P------LLFTQKYPQEHMMVQDMLSP 312 (332)
T ss_dssp HHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH---HHHHHHHHHTTC-C----C------HHHHHHCHHHHHHHHHHHCS
T ss_pred HhcCCCCcchhhHHHHHHHHHHHHHcCCChhH---HHHHHHHhhccC-C----C------cccccCChhHHHHHHHHccC
Confidence 99888889999999999999999998766431 111111111111 0 0 01122334578899999999
Q ss_pred CCCCCCCHHHHHH
Q 006903 596 SPNERPSMNQVAV 608 (626)
Q Consensus 596 dP~~RPs~~ev~~ 608 (626)
||++|||++|+++
T Consensus 313 ~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 313 SPTERPEATDIIE 325 (332)
T ss_dssp SGGGSCCHHHHHH
T ss_pred CCCcCCCHHHHhh
Confidence 9999999999976
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-40 Score=347.31 Aligned_cols=255 Identities=16% Similarity=0.201 Sum_probs=195.0
Q ss_pred ccccccCCCcceEEEEeCC------CcEEEEEEcCCCCCC------------HHHHHHHHHHhccCCCCCccccceEEEe
Q 006903 351 AELLGRGKHGSLYRVVLDD------GLMLAVKRLRDWSIS------------SEDFKNRMQKIDHVKHPNVLPPLAYYCS 412 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~------g~~vAvK~l~~~~~~------------~~~~~~ei~~l~~l~H~nIv~l~g~~~~ 412 (626)
.+.||+|+||.||+|...+ ++.||||.+...... ...+..|+..++.++||||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 4789999999999998654 478999998654311 1234456667788899999999999877
Q ss_pred C----CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC--CCCC
Q 006903 413 K----QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN--NNME 486 (626)
Q Consensus 413 ~----~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~--~~~~ 486 (626)
. ...++||||+ +|+|.+++.. ....+++..++.++.|++.||.||| +.+|+||||||+|||++ .++.
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH----~~~iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIH----EHEYVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEESSCTTC
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHH----HCCeEEecCCHHHEEEecCCCCe
Confidence 5 4589999999 9999999974 2357999999999999999999999 57999999999999999 8899
Q ss_pred eEEeeccCccccCCCc----------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH
Q 006903 487 PCISEYGLIVTENHDQ----------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH 556 (626)
Q Consensus 487 ~kl~DFGl~~~~~~~~----------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~ 556 (626)
+||+|||+++...... ....++..|++||......++.++|||||||++|||+||+.||........+..
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~ 272 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR 272 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHH
Confidence 9999999986532211 223478899999999888899999999999999999999999974333322222
Q ss_pred HHhhc--ccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 557 SVVRE--EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 557 ~~~~~--~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
..... ....+..+..+.. ...+..+.+++..||+.||++||++.++++.|+++...
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 273 DSKIRYRENIASLMDKCFPA----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp HHHHHHHHCHHHHHHHHSCT----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHHhccc----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 11111 0111111111110 11234588899999999999999999999999988764
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=348.72 Aligned_cols=250 Identities=22% Similarity=0.299 Sum_probs=190.6
Q ss_pred cccccccCCCcceEEEEeC--C--CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEe-CCeEEEEEee
Q 006903 350 PAELLGRGKHGSLYRVVLD--D--GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCS-KQEKLLVYEY 422 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~--~--g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-~~~~~lv~Ey 422 (626)
..+.||+|+||.||+|... + +..||||.++.... ..+++.+|+.++++++||||+++++++.. ++..++||||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence 4578999999999999853 2 24689999875443 23678999999999999999999998754 4578999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
+++|+|.++++. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 173 ~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 173 MKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLA----SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp CTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCCCHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHH----HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 999999999974 3456889999999999999999999 579999999999999999999999999998643221
Q ss_pred ------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 502 ------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
.....++..|++||......++.++|||||||++|||+| |.+||... +..+............
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~-~~~~~~~~~~~~~~~~--------- 316 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLL--------- 316 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-CSSCHHHHHHTTCCCC---------
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC-CHHHHHHHHHcCCCCC---------
Confidence 122345667999999888888999999999999999999 55566432 2222222222221110
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 317 --~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 317 --QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred --CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 01112335888999999999999999999999999987653
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=336.85 Aligned_cols=250 Identities=20% Similarity=0.269 Sum_probs=197.5
Q ss_pred ccccccCCCcceEEEEeC-CC-------cEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVLD-DG-------LMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g-------~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||+|... ++ ..||+|.+.... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 92 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQE 92 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEE
Confidence 478999999999999843 33 579999997654 345779999999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC--------eEEeecc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME--------PCISEYG 493 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~--------~kl~DFG 493 (626)
|+++|+|.+++... ...+++..+..++.|++.||.||| +++|+||||||+|||++.++. +||+|||
T Consensus 93 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg 166 (289)
T 4fvq_A 93 FVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLE----ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166 (289)
T ss_dssp CCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred CCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHh----hCCeECCCcCcceEEEecCCcccccccceeeeccCc
Confidence 99999999999742 345899999999999999999999 579999999999999998887 9999999
Q ss_pred CccccCCCccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 494 LIVTENHDQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 494 l~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
++...... ....++..|++||.... ..++.++|||||||++|||+||..|+....+................
T Consensus 167 ~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~------ 239 (289)
T 4fvq_A 167 ISITVLPK-DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPA------ 239 (289)
T ss_dssp SCTTTSCH-HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC------
T ss_pred ccccccCc-cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCC------
Confidence 98654332 23446778999998876 66899999999999999999976665544443333222211111110
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccccc
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERS 620 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 620 (626)
.....+.+++.+||+.||++|||+.|+++.|+++.......
T Consensus 240 -------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~ 280 (289)
T 4fvq_A 240 -------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280 (289)
T ss_dssp -------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC------
T ss_pred -------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCC
Confidence 01224778899999999999999999999999997755433
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=337.02 Aligned_cols=250 Identities=19% Similarity=0.244 Sum_probs=191.5
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|+..+|+.||+|+++..... .+.+.+|++++++++||||+++++++.+++..++||||+++ +
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~ 104 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-D 104 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-E
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-C
Confidence 4789999999999999888999999999754422 35788999999999999999999999999999999999984 8
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~ 504 (626)
|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.... ....
T Consensus 105 l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 178 (311)
T 3niz_A 105 LKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCH----QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178 (311)
T ss_dssp HHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---C
T ss_pred HHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccC
Confidence 8888864 3356899999999999999999999 57999999999999999999999999999875432 2233
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--HHHHhhcccccc---------------
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW--VHSVVREEWTVE--------------- 566 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~--------------- 566 (626)
..++..|++||.... ..++.++|||||||++|||+||+.||......... +...........
T Consensus 179 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (311)
T 3niz_A 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258 (311)
T ss_dssp CCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCC
T ss_pred CcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhccc
Confidence 456888999998754 56799999999999999999999999743332221 111111110000
Q ss_pred -cccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 -VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 -~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....... ....+.....+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 259 QVFEKKPW-SSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCH-HHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccCCcH-HHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 0001112345789999999999999999999987
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-40 Score=339.41 Aligned_cols=254 Identities=20% Similarity=0.323 Sum_probs=203.5
Q ss_pred cccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
..+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 457899999999999984 3578999999976542 236789999999999 9999999999999999999999
Q ss_pred eecCCCChhHhhcCCCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 421 EYQPNGSLFNLLHGSEN---------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||||||+||+++.++
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~ 182 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA----SKNCIHRDLAARNILLTHGR 182 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEETTT
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCccceEEEcCCC
Confidence 99999999999975322 125899999999999999999999 57999999999999999999
Q ss_pred CeEEeeccCccccCCCcc-----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 486 EPCISEYGLIVTENHDQS-----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
.+||+|||++........ ...++..|++||......++.++|||||||++|||+| |+.||......... ....
T Consensus 183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~~~~ 261 (313)
T 1t46_A 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-YKMI 261 (313)
T ss_dssp EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH-HHHH
T ss_pred CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH-HHHh
Confidence 999999999875433221 2334567999999888888999999999999999999 99998754332222 2222
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
....... ........+.+++.+||+.||++|||+.|+++.|+++..+..
T Consensus 262 ~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 262 KEGFRML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred ccCCCCC----------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 2211110 011123458889999999999999999999999999876543
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=339.45 Aligned_cols=251 Identities=21% Similarity=0.309 Sum_probs=201.1
Q ss_pred cccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
..+.||+|+||.||+|.. .+++.||||.++.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 457899999999999984 3458999999976432 23578899999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCee
Q 006903 422 YQPNGSLFNLLHGSEN---------------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNIL 480 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NIL 480 (626)
|+++|+|.+++..... ...+++..++.++.|++.||.||| +++|+||||||+||+
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dikp~NIl 182 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA----EMKLVHRDLAARNIL 182 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH----HCCCcccccchheEE
Confidence 9999999999975322 134889999999999999999999 579999999999999
Q ss_pred eCCCCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHH
Q 006903 481 FNNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATW 554 (626)
Q Consensus 481 l~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~ 554 (626)
++.++.+||+|||++....... ....++..|++||......++.++|||||||++|||+| |+.||.... ....
T Consensus 183 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-~~~~ 261 (314)
T 2ivs_A 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP-PERL 261 (314)
T ss_dssp EETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-GGGH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC-HHHH
Confidence 9999999999999987543222 22345667999999887778999999999999999999 999986432 2222
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........ ... ........+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus 262 ~~~~~~~~-~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 262 FNLLKTGH-RME----------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp HHHHHTTC-CCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHhhcCC-cCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 22222211 111 1112234588899999999999999999999999998653
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-40 Score=333.61 Aligned_cols=249 Identities=23% Similarity=0.402 Sum_probs=191.7
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|+... .||||+++...... +.+.+|++++++++||||+++++++ ..+..++||||+++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~ 105 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSS 105 (289)
T ss_dssp EEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEE
T ss_pred eeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCc
Confidence 4789999999999998643 59999997655433 5689999999999999999999964 5567899999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----Cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-----DQ 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-----~~ 502 (626)
|.+++.. ....+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++..... ..
T Consensus 106 L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (289)
T 3og7_A 106 LYHHLHA--SETKFEMKKLIDIARQTARGMDYLH----AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179 (289)
T ss_dssp HHHHHTT--C---CCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred HHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH----hCCcccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence 9999963 3356999999999999999999999 57999999999999999999999999999864322 11
Q ss_pred cccccccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 503 SFLAQTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
....++..|++||... ...++.++|||||||++|||+||+.||...................... . ....
T Consensus 180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~ 252 (289)
T 3og7_A 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL-S------KVRS 252 (289)
T ss_dssp ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCT-T------SSCT
T ss_pred cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcch-h------hccc
Confidence 2345788899999875 5567889999999999999999999997655544443333332211110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
.....+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 253 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 253 NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 233468899999999999999999999999999864
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=341.08 Aligned_cols=242 Identities=17% Similarity=0.191 Sum_probs=193.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+++|+
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~ 91 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCc
Confidence 478999999999999854 78999999986543 234678999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----Cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-----DQ 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-----~~ 502 (626)
|.+++.. ...+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||++..... ..
T Consensus 92 L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 164 (323)
T 3tki_A 92 LFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (323)
T ss_dssp GGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred HHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence 9999963 356999999999999999999999 57999999999999999999999999999864321 12
Q ss_pred cccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 SFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||......+ +.++|||||||++|||+||+.||...................... ....
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 234 (323)
T 3tki_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----------WKKI 234 (323)
T ss_dssp CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTT----------GGGS
T ss_pred CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCc----------cccC
Confidence 23467889999998866554 778999999999999999999997544332222222221111100 0112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 235 DSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 2347789999999999999999999764
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-40 Score=330.67 Aligned_cols=243 Identities=24% Similarity=0.341 Sum_probs=188.3
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC-----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI-----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... ++.||||+++.... ..+.+.+|+++++.++||||+++++++..++..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence 478999999999999975 88999999875432 236789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC---ceeccCCCCCeeeCC--------CCCeEEeeccC
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG---IAHGNLKSNNILFNN--------NMEPCISEYGL 494 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~---ivHrDlkp~NILl~~--------~~~~kl~DFGl 494 (626)
|+|.+++.. ..+++..+..++.|++.||.|||+ .+ |+||||||+|||++. ++.+||+|||+
T Consensus 91 ~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~----~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 91 GPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHD----EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp EEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHH----SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred CCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh----CCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 999999952 468999999999999999999994 56 999999999999986 67899999999
Q ss_pred ccccCCC-ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHH
Q 006903 495 IVTENHD-QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 495 ~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
+...... .....++..|++||......++.++||||||+++|||+||+.||...... ..............
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~------- 234 (271)
T 3dtc_A 163 AREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-AVAYGVAMNKLALP------- 234 (271)
T ss_dssp -------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-HHHHHHHTSCCCCC-------
T ss_pred ccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHhhhcCCCCCC-------
Confidence 8653322 22346788899999988888899999999999999999999999754322 22222222211111
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.+......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 235 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 235 ---IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ---CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1112234588899999999999999999999999864
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=343.23 Aligned_cols=253 Identities=18% Similarity=0.268 Sum_probs=199.4
Q ss_pred cccccccCCCcceEEEEe------CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
..+.||+|+||.||+|.. .++..||||.++... ...+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 357899999999999985 246789999997543 2346799999999999 8999999999999999999999
Q ss_pred eecCCCChhHhhcCCCCC--------------------CCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCee
Q 006903 421 EYQPNGSLFNLLHGSENG--------------------QSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNIL 480 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NIL 480 (626)
||+++|+|.+++...... ..+++..++.++.|++.||.||| +.||+||||||+|||
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl 204 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE----FKSCVHRDLAARNVL 204 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH----HTTEEETTCSGGGEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChhhEE
Confidence 999999999999753321 34899999999999999999999 579999999999999
Q ss_pred eCCCCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHH
Q 006903 481 FNNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATW 554 (626)
Q Consensus 481 l~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~ 554 (626)
++.++.+||+|||++....... ....++..|++||......++.++|||||||++|||+| |+.||........
T Consensus 205 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~- 283 (344)
T 1rjb_A 205 VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN- 283 (344)
T ss_dssp EETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-
T ss_pred EcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH-
Confidence 9999999999999986543221 12345667999999888888999999999999999998 9999875433222
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
+............ +......+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 284 ~~~~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 284 FYKLIQNGFKMDQ----------PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp HHHHHHTTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred HHHHHhcCCCCCC----------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 2222222211110 1112345888999999999999999999999999987653
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=333.90 Aligned_cols=249 Identities=20% Similarity=0.267 Sum_probs=191.4
Q ss_pred cccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
..+.||+|+||.||+|... .+..||+|.++.... ..+.+.+|+.++++++||||+++++++ .++..++||||+
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~ 97 (281)
T 1mp8_A 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELC 97 (281)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecC
Confidence 3578999999999999853 256799999876432 235789999999999999999999987 456789999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 98 TLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp TTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----hCCeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999999742 346899999999999999999999 5799999999999999999999999999986543221
Q ss_pred ---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 ---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....++..|++||......++.++|||||||++|||++ |+.||..... .+....+...... . .+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-~~~~~~i~~~~~~-~----------~~ 239 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERL-P----------MP 239 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-GGHHHHHHTTCCC-C----------CC
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-HHHHHHHHcCCCC-C----------CC
Confidence 22334567999999888888999999999999999997 8888864322 2233332222111 0 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
......+.+++.+||+.||++|||+.|+++.|+++.++.
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 240 PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 122345788999999999999999999999999987654
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-40 Score=342.15 Aligned_cols=247 Identities=17% Similarity=0.281 Sum_probs=192.7
Q ss_pred ccccccCCCcceEEEEe-CCCc----EEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGL----MLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|+. .+++ .||+|.++... ...+.+.+|++++++++||||+++++++... ..++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~ 98 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM 98 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEec
Confidence 47899999999999984 3444 46888886543 3457899999999999999999999998865 478999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 99 ~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 99 PFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLE----DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp TTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 999999999742 356999999999999999999999 5799999999999999999999999999986533221
Q ss_pred ----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 ----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 ----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|++||......++.++|||||||++|||+| |+.||... ...+............ .
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~~~~~~~~~~~~~~-----------~ 240 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP-----------Q 240 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CGGGHHHHHHTTCCCC-----------C
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC-CHHHHHHHHHcCCCCC-----------C
Confidence 12234668999999888889999999999999999999 99998643 2222222222211110 1
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.......+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 241 ~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 241 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 112233588899999999999999999999999987653
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-40 Score=340.44 Aligned_cols=250 Identities=13% Similarity=0.105 Sum_probs=201.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|+++++++ +||||+++++++...+..++||||+ +|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 47899999999999994 679999999987543 234688999999999 9999999999999999999999999 9999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC-----eEEeeccCccccCCC--
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME-----PCISEYGLIVTENHD-- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGl~~~~~~~-- 501 (626)
.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++. +||+|||+++.....
T Consensus 92 ~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH----~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~ 165 (330)
T 2izr_A 92 EDLFDLC--DRTFSLKTVLMIAIQLISRMEYVH----SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET 165 (330)
T ss_dssp HHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred HHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence 9999743 357999999999999999999999 579999999999999998887 999999998753221
Q ss_pred --------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCC--cchhHHHHHHhhcccccccccHH
Q 006903 502 --------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNG--FNLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 502 --------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
.....++..|++||......++.++|||||||++|||+||+.||... ....+....+....... ...
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~---~~~ 242 (330)
T 2izr_A 166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT---PIE 242 (330)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS---CHH
T ss_pred CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC---CHH
Confidence 12456788999999998888899999999999999999999999743 22323232222111000 000
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
. .....+ .+.+++..||+.||.+||++.+|.+.|+++...
T Consensus 243 ~----~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 243 V----LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp H----HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred H----HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 0 001112 688999999999999999999999999987654
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=339.53 Aligned_cols=258 Identities=23% Similarity=0.333 Sum_probs=194.3
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhcc--CCCCCccccceEEEeC----CeEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDH--VKHPNVLPPLAYYCSK----QEKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~--l~H~nIv~l~g~~~~~----~~~~lv~Ey~ 423 (626)
..+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++.. ++||||+++++++... ...++||||+
T Consensus 41 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 117 (337)
T 3mdy_A 41 MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117 (337)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred EEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence 3578999999999999975 8999999986432 3444555555544 5999999999999887 6789999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc----cCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL----REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
++|+|.++++. ..+++..++.++.|++.||.|||+.+ +.++|+||||||+|||++.++.+||+|||+++...
T Consensus 118 ~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 193 (337)
T 3mdy_A 118 ENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI 193 (337)
T ss_dssp TTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeec
Confidence 99999999963 35899999999999999999999321 12299999999999999999999999999986532
Q ss_pred CCc-------cccccccccchhhccccCCCCCc------chhHHHHHHHHHHHcC----------CCCCCCCc---chhH
Q 006903 500 HDQ-------SFLAQTSSLKINDISNQMCSTIK------ADVYGFGVILLELLTG----------KLVQNNGF---NLAT 553 (626)
Q Consensus 500 ~~~-------~~~~~~~~~~~pe~~~~~~~~~k------~DVwSfGvvl~elltg----------~~p~~~~~---~~~~ 553 (626)
... ....++..|++||.......+.+ +|||||||++|||+|| +.||.... ....
T Consensus 194 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 273 (337)
T 3mdy_A 194 SDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYE 273 (337)
T ss_dssp ---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred cccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchh
Confidence 221 13457889999999876655554 9999999999999999 55554211 1111
Q ss_pred HHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 554 WVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 554 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
..............+. ......++...+.+++.+||+.||++|||+.|+++.|+.+.++.+
T Consensus 274 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 274 DMREIVCIKKLRPSFP----NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp HHHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hhHHHHhhhccCcccc----ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 1122111111111111 111223566779999999999999999999999999999987654
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=332.92 Aligned_cols=250 Identities=22% Similarity=0.326 Sum_probs=204.8
Q ss_pred cccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 350 PAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
..+.||+|+||.||+|... ++..||+|.+.......+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 3578999999999999965 588999999987666668899999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SF 504 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~ 504 (626)
.+++... ....+++..+..++.+++.||.||| +.+|+||||||+||+++.++.+||+|||++....... ..
T Consensus 97 ~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 171 (288)
T 3kfa_A 97 LDYLREC-NRQEVSAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171 (288)
T ss_dssp HHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHH----HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETT
T ss_pred HHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHH----HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccC
Confidence 9999753 3356899999999999999999999 5689999999999999999999999999987644322 12
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
..++..|++||......++.++||||||+++|||++ |+.||... +............ ... .+.....
T Consensus 172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~-~~~~~~~~~~~~~-~~~----------~~~~~~~ 239 (288)
T 3kfa_A 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDY-RME----------RPEGCPE 239 (288)
T ss_dssp EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHHHHHTTC-CCC----------CCTTCCH
T ss_pred CccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHhccC-CCC----------CCCCCCH
Confidence 234567999999888888999999999999999999 88888643 2222222222211 111 1112234
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+.+++.+||+.||++|||+.|+++.|+.+..+
T Consensus 240 ~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 240 KVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 588899999999999999999999999987654
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=345.27 Aligned_cols=248 Identities=21% Similarity=0.284 Sum_probs=196.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+|+.||+|+++... ...+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 46799999999999985 579999999997654 3456799999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee--CCCCCeEEeeccCccccCCC--ccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF--NNNMEPCISEYGLIVTENHD--QSF 504 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl--~~~~~~kl~DFGl~~~~~~~--~~~ 504 (626)
.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++.+||+|||+++..... ...
T Consensus 174 ~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~ 247 (373)
T 2x4f_A 174 FDRIID--ESYNLTELDTILFMKQICEGIRHMH----QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247 (373)
T ss_dssp HHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred HHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence 998863 2346899999999999999999999 5799999999999999 66788999999998764332 233
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++|||||||++|||+||+.||.... ..+....+....+... ... .......
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~--~~~------~~~~~~~ 318 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN-DAETLNNILACRWDLE--DEE------FQDISEE 318 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHHTCCCSC--SGG------GTTSCHH
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhccCCCC--hhh------hccCCHH
Confidence 457889999999888888999999999999999999999997543 3333344433322111 000 0112335
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH--HHHhh
Q 006903 585 LLQVALRCINQSPNERPSMNQVAV--MINNI 613 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i 613 (626)
+.+++.+||+.||++|||+.|+++ .+.+.
T Consensus 319 ~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 319 AKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 888999999999999999999987 45443
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=365.97 Aligned_cols=246 Identities=20% Similarity=0.249 Sum_probs=198.6
Q ss_pred ccccCCCcceEEEEeC---CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 353 LLGRGKHGSLYRVVLD---DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.||+|+||.||+|.+. ++..||||+++... ...+++.+|+++|++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999853 56789999998653 345789999999999999999999999876 56899999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS---- 503 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~---- 503 (626)
|.+++.. ....+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 422 L~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~LH----~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVG--KREEIPVSNVAELLHQVSMGMKYLE----EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH----HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 9999964 3456999999999999999999999 57999999999999999999999999999876432211
Q ss_pred --ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 504 --FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 504 --~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
...++..|++||......++.++|||||||++|||+| |+.||..... .+....+.... ... .+..
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-~~~~~~i~~~~-~~~----------~p~~ 563 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-PEVMAFIEQGK-RME----------CPPE 563 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-HHHHHHHHTTC-CCC----------CCTT
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-HHHHHHHHcCC-CCC----------CCCc
Confidence 1223467999999988889999999999999999998 9999875332 33333332221 111 1122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
+...+.+++.+||+.||++||++.+|++.|+.+....
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 3346889999999999999999999999999876543
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=341.90 Aligned_cols=242 Identities=20% Similarity=0.260 Sum_probs=185.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 136 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF 136 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHH
Confidence 478999999999999965 58899999997543 4467889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCccccCCC--ccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENHD--QSF 504 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~~~~--~~~ 504 (626)
+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||+++..... ...
T Consensus 137 ~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (349)
T 2w4o_A 137 DRIVE---KGYYSERDAADAVKQILEAVAYLH----ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT 209 (349)
T ss_dssp HHHTT---CSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccccc
Confidence 99963 346899999999999999999999 579999999999999975 889999999998754332 233
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++|||||||++|||+||+.||............+........ .+ ........
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~--~~------~~~~~~~~ 281 (349)
T 2w4o_A 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI--SP------WWDEVSLN 281 (349)
T ss_dssp ---CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCC--TT------TTTTSCHH
T ss_pred ccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccC--Cc------hhhhCCHH
Confidence 45788999999998888899999999999999999999999765544333444333321110 00 01112335
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.+++.+||+.||++|||+.|+++
T Consensus 282 ~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 282 AKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 788999999999999999999976
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=340.35 Aligned_cols=244 Identities=18% Similarity=0.264 Sum_probs=197.7
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
..+.||+|+||.||+|.. .+|+.||+|++....... +.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 357899999999999985 468999999997655433 4688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC---CeEEeeccCccccCCCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM---EPCISEYGLIVTENHDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGl~~~~~~~~ 502 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++ .+||+|||++.......
T Consensus 113 g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~ 185 (362)
T 2bdw_A 113 GELFEDIVA---REFYSEADASHCIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 185 (362)
T ss_dssp CBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence 999999953 346899999999999999999999 57999999999999998654 59999999987644322
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
....+++.|++||......++.++|||||||++|||++|+.||.... ..+....+........ .+ ....
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~-~~~~~~~i~~~~~~~~--~~------~~~~ 256 (362)
T 2bdw_A 186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-QHRLYAQIKAGAYDYP--SP------EWDT 256 (362)
T ss_dssp SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCCC--TT------GGGG
T ss_pred ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHhCCCCCC--cc------cccC
Confidence 23567889999999988889999999999999999999999997543 3333333333221110 00 0011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
....+.+++.+||+.||++|||+.|+++.
T Consensus 257 ~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 257 VTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 22357889999999999999999998763
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=340.36 Aligned_cols=238 Identities=17% Similarity=0.175 Sum_probs=200.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 47899999999999995 469999999986532 3456788999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.........
T Consensus 126 g~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~ 198 (350)
T 1rdq_E 126 GEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL 198 (350)
T ss_dssp CBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCC
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCccceEEECCCCCEEEcccccceeccCCcccc
Confidence 999999964 245899999999999999999999 5799999999999999999999999999998765555556
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.+++.|++||+.....++.++|||||||++|||++|+.||... +..+....+....... +......+
T Consensus 199 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~~~~~ 265 (350)
T 1rdq_E 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD-QPIQIYEKIVSGKVRF------------PSHFSSDL 265 (350)
T ss_dssp EECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTTCCHHH
T ss_pred cCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC-CHHHHHHHHHcCCCCC------------CCCCCHHH
Confidence 7899999999988888899999999999999999999999754 3334444443332110 11122347
Q ss_pred HHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 586 LQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
.+++.+||+.||++||+ ++|+++
T Consensus 266 ~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 88999999999999998 888865
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-40 Score=363.60 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=204.6
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|.+.++..||||+++......++|.+|+++|++++||||+++++++.. +..++||||+++|+|.+
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~ 350 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLD 350 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHH
Confidence 47899999999999999888889999998776777899999999999999999999998765 67899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
+++.. ....+++..++.++.||+.||.||| +++|+||||||+|||+++++.+||+|||+++...... ....
T Consensus 351 ~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 425 (535)
T 2h8h_A 351 FLKGE-TGKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 425 (535)
T ss_dssp HHSHH-HHTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTT
T ss_pred HHhhc-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCc
Confidence 99632 2245899999999999999999999 5799999999999999999999999999987543211 1223
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++|||||||++|||+| |+.||... ...+....+.... ... ....+...+
T Consensus 426 ~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~-~~~~~~~~i~~~~-~~~----------~~~~~~~~l 493 (535)
T 2h8h_A 426 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGY-RMP----------CPPECPESL 493 (535)
T ss_dssp SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC-CHHHHHHHHHTTC-CCC----------CCTTCCHHH
T ss_pred CcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCC-CCC----------CCCCCCHHH
Confidence 4567999999888888999999999999999999 88888643 3333333332221 111 111223458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+++.+||+.||++|||+++|++.|+.+....
T Consensus 494 ~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 494 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 88999999999999999999999999986543
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=331.73 Aligned_cols=253 Identities=13% Similarity=0.139 Sum_probs=202.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++.+ +|+|++++++++......++||||+ +++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 47899999999999994 679999999986533 345688999999999 7999999999999999999999999 9999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC-----eEEeeccCccccCCC--
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME-----PCISEYGLIVTENHD-- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGl~~~~~~~-- 501 (626)
.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+++.....
T Consensus 93 ~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 166 (298)
T 1csn_A 93 EDLLDLC--GRKFSVKTVAMAAKQMLARVQSIH----EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 166 (298)
T ss_dssp HHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred HHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence 9999743 346999999999999999999999 689999999999999987776 999999998653321
Q ss_pred --------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc--chhHHHHHHhhcccccccccHH
Q 006903 502 --------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF--NLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 502 --------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
.....++..|++||......++.++|||||||++|||+||+.||.... ...+....+........ .+
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~- 243 (298)
T 1csn_A 167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP--LR- 243 (298)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC--HH-
T ss_pred cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc--HH-
Confidence 123457889999999888888999999999999999999999997532 22222222211110000 00
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
.........+.+++.+||+.||++|||+++|++.|+++.....
T Consensus 244 ----~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 244 ----ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp ----HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ----HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 0011223468899999999999999999999999999876543
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-40 Score=337.35 Aligned_cols=256 Identities=21% Similarity=0.261 Sum_probs=196.0
Q ss_pred cccccccCCCcceEEEEe-----CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL-----DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~ 420 (626)
..+.||+|+||.||+|++ .+++.||||+++... ...+.+.+|++++++++||||+++++++... ...++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 357899999999999983 468999999997543 3447899999999999999999999999876 6689999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++|+|.+++.. ....+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.....
T Consensus 105 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 105 EFLPSGSLKEYLPK--NKNKINLKQQLKYAVQICKGMDYLG----SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp ECCTTCBHHHHHHH--HTTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EeCCCCcHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHhh----cCCcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 99999999999953 2346899999999999999999999 57999999999999999999999999999875433
Q ss_pred Cc------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc---cccccHH
Q 006903 501 DQ------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT---VEVFDEV 571 (626)
Q Consensus 501 ~~------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~d~~ 571 (626)
.. ....++..|++||......++.++||||||+++|||+||+.|+...... .......... .......
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCGGGHHHHHHHH
T ss_pred CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcccccCHHHHHHH
Confidence 22 2234566799999988777889999999999999999999886422110 0000000000 0000000
Q ss_pred HHh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 572 LIA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 572 ~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
... ...+......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 256 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 000 0011223346889999999999999999999999999874
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=332.39 Aligned_cols=252 Identities=22% Similarity=0.288 Sum_probs=197.4
Q ss_pred ccccccccCCCcceEEEEeCC----CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEe-CCeEEEEEe
Q 006903 349 APAELLGRGKHGSLYRVVLDD----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCS-KQEKLLVYE 421 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-~~~~~lv~E 421 (626)
...+.||+|+||.||+|...+ ...||+|.+..... ..+.+.+|++++++++||||+++++++.. ++..++|||
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 107 (298)
T 3f66_A 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 107 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEE
T ss_pred hhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEe
Confidence 345789999999999998532 33689999876442 23578899999999999999999998654 567899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 ~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 108 YMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA----SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp CCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999999974 3456899999999999999999999 579999999999999999999999999998653221
Q ss_pred -------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 502 -------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 502 -------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
.....++..|++||......++.++||||||+++|||++|..|+..+.+..+.............
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 253 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-------- 253 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCC--------
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCC--------
Confidence 12234566799999988888899999999999999999965554433333333333322221110
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
+......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 254 ---~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 254 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred ---CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1112235888999999999999999999999999987654
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=331.89 Aligned_cols=251 Identities=18% Similarity=0.169 Sum_probs=195.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+++.||||+++..... .+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-
Confidence 47899999999999995 46899999999754432 36788999999999999999999999999999999999986
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Ccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~ 503 (626)
++.+++.. ....+++..+..++.|++.||+||| +.||+||||||+|||++.++.+||+|||++..... ...
T Consensus 86 ~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH----~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (292)
T 3o0g_A 86 DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCH----SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159 (292)
T ss_dssp EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCC
T ss_pred CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccccc
Confidence 66665543 2356999999999999999999999 57999999999999999999999999999875432 223
Q ss_pred ccccccccchhhccccCC-CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc--ccccHH---------
Q 006903 504 FLAQTSSLKINDISNQMC-STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV--EVFDEV--------- 571 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~-~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~d~~--------- 571 (626)
...++..|++||...... ++.++|||||||++|||+||+.|+..+.+..+....+....... +.....
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (292)
T 3o0g_A 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccccc
Confidence 345688899999876554 79999999999999999999998766666555544443211000 000000
Q ss_pred ------HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 572 ------LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 572 ------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.....+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000011122345788999999999999999999976
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=330.32 Aligned_cols=250 Identities=18% Similarity=0.234 Sum_probs=192.2
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|+..+|+.||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||+++ +
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 85 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-D 85 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-E
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-C
Confidence 478999999999999988899999999975432 336788999999999999999999999999999999999985 9
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~ 504 (626)
|.+++... ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||++..... ....
T Consensus 86 l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (288)
T 1ob3_A 86 LKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCH----DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159 (288)
T ss_dssp HHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred HHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccc
Confidence 99998642 356899999999999999999999 57999999999999999999999999999865332 1223
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc---c----ccc----ccccHHH
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE---E----WTV----EVFDEVL 572 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~---~----~~~----~~~d~~~ 572 (626)
..++..|++||.... ..++.++|||||||++|||+||+.||....... ....+... . +.. ..+++..
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccccccccc
Confidence 456888999998754 457999999999999999999999997543322 22222110 0 000 0000000
Q ss_pred H------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 I------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. ...........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 00001112345788999999999999999999975
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=338.02 Aligned_cols=251 Identities=20% Similarity=0.325 Sum_probs=189.7
Q ss_pred cccccccCCCcceEEEEeCC-C---cEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeE------
Q 006903 350 PAELLGRGKHGSLYRVVLDD-G---LMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEK------ 416 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~-g---~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~------ 416 (626)
..+.||+|+||.||+|.... + ..||||.++.... ..+.+.+|++++++++||||+++++++...+..
T Consensus 27 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CE
T ss_pred EeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCcc
Confidence 35789999999999998543 3 2799999976432 236789999999999999999999999877655
Q ss_pred EEEEeecCCCChhHhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeecc
Q 006903 417 LLVYEYQPNGSLFNLLHGSE---NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYG 493 (626)
Q Consensus 417 ~lv~Ey~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 493 (626)
++||||+++|+|.+++.... ....+++..++.++.|++.||.||| +.+|+||||||+|||+++++.+||+|||
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH----~~~ivH~Dikp~NIli~~~~~~kl~Dfg 182 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS----SRNFIHRDLAARNCMLAEDMTVCVADFG 182 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH----cCCcccCCCCcceEEEcCCCCEEEeecc
Confidence 99999999999999995322 2236899999999999999999999 5799999999999999999999999999
Q ss_pred CccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccc
Q 006903 494 LIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEV 567 (626)
Q Consensus 494 l~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 567 (626)
+++...... ....++..|++||......++.++|||||||++|||+| |+.||.... ..+............
T Consensus 183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-~~~~~~~~~~~~~~~-- 259 (323)
T 3qup_A 183 LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE-NAEIYNYLIGGNRLK-- 259 (323)
T ss_dssp C-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-GGGHHHHHHTTCCCC--
T ss_pred ccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC-hHHHHHHHhcCCCCC--
Confidence 986533221 12334567999999888889999999999999999999 888886433 223333332222111
Q ss_pred ccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 568 FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 568 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++|||+.++++.|+++...
T Consensus 260 ---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 260 ---------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp ---------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1112234588999999999999999999999999998654
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=339.14 Aligned_cols=245 Identities=19% Similarity=0.280 Sum_probs=196.6
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCC------CCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDW------SISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~------~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 107 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 107 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeC
Confidence 357899999999999985 57999999998532 12467899999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC---eEEeeccCcccc
Q 006903 423 QPNGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME---PCISEYGLIVTE 498 (626)
Q Consensus 423 ~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl~~~~ 498 (626)
+++|+|.+++... .....+++..+..++.|++.||.||| +++|+||||||+|||++.++. +||+|||++...
T Consensus 108 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 108 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH----DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp CSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999998887532 12346899999999999999999999 579999999999999987654 999999998764
Q ss_pred CCCc---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 499 NHDQ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 499 ~~~~---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.... ....+++.|++||......++.++|||||||++|||+||+.||.... .+....+....... .+...
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i~~~~~~~---~~~~~-- 256 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKM---NPRQW-- 256 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHHHHTCCCC---CHHHH--
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHHHcCCCCC---Ccccc--
Confidence 4322 23467889999999988888999999999999999999999997532 22233332222111 11100
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++.+||+.||++|||+.|+++
T Consensus 257 ---~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 257 ---SHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp ---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 112335788999999999999999999986
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=337.61 Aligned_cols=251 Identities=18% Similarity=0.280 Sum_probs=200.0
Q ss_pred cccccccCCCcceEEEEe--------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 350 PAELLGRGKHGSLYRVVL--------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~--------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
..+.||+|+||.||+|.. .++..||||+++.... ..+.+.+|+++++++ +||||+++++++...+..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 357899999999999985 3577899999976542 235688999999999 89999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 419 VYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
||||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~ 194 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA----SQKCIHRDLAARNVLVTENN 194 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCccceEEEcCCC
Confidence 9999999999999975331 134899999999999999999999 57999999999999999999
Q ss_pred CeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 486 EPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
.+||+|||++....... ....++..|++||......++.++|||||||++|||+| |+.||... +..+....+.
T Consensus 195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~~~~~~~~ 273 (334)
T 2pvf_A 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLK 273 (334)
T ss_dssp CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHH
T ss_pred CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC-CHHHHHHHHh
Confidence 99999999987543321 22334567999998877778999999999999999999 99888643 3333333332
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.... .. ........+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 274 ~~~~-~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 274 EGHR-MD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp HTCC-CC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCC-CC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 2211 11 1112234588899999999999999999999999998653
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=342.77 Aligned_cols=238 Identities=18% Similarity=0.265 Sum_probs=194.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|.++++.+ +||||+++++++.+.+..|+||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 47899999999999985 468999999997532 3445688999999988 79999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---C
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---D 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~ 501 (626)
+|+|.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.... .
T Consensus 108 gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 180 (353)
T 3txo_A 108 GGDLMFHIQK---SRRFDEARARFYAAEIISALMFLH----DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT 180 (353)
T ss_dssp SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCcccCCCHHHEEECCCCCEEEccccceeecccCCcc
Confidence 9999999963 246999999999999999999999 57999999999999999999999999999875322 2
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||+.....++.++|||||||++|||+||+.||... +..+....+....... +...
T Consensus 181 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~ 247 (353)
T 3txo_A 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE-NEDDLFEAILNDEVVY------------PTWL 247 (353)
T ss_dssp -----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTTS
T ss_pred ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCC------------CCCC
Confidence 23456889999999988888899999999999999999999999754 3344444444332211 1112
Q ss_pred HHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSM------NQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~------~ev~~ 608 (626)
...+.+++.+||+.||++||++ +|+++
T Consensus 248 ~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 248 HEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 2347789999999999999998 67765
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=340.99 Aligned_cols=242 Identities=16% Similarity=0.217 Sum_probs=188.8
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+++.. +++.||||++.......+.+.+|+.+++.++||||+++++++.+.+..++||||+++|+|.
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHH
Confidence 478999999999999954 7999999999876666688999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC--eEEeeccCccccC--CCcccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME--PCISEYGLIVTEN--HDQSFL 505 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGl~~~~~--~~~~~~ 505 (626)
+++.. ...+++..+..++.|++.||.||| +.||+||||||+|||++.++. +||+|||+++... ......
T Consensus 105 ~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH----~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 177 (361)
T 3uc3_A 105 ERICN---AGRFSEDEARFFFQQLLSGVSYCH----SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177 (361)
T ss_dssp HHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------------
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCC
Confidence 99953 246899999999999999999999 579999999999999987765 9999999986422 222345
Q ss_pred ccccccchhhccccCCCCCc-chhHHHHHHHHHHHcCCCCCCCCcc---hhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 506 AQTSSLKINDISNQMCSTIK-ADVYGFGVILLELLTGKLVQNNGFN---LATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k-~DVwSfGvvl~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.++..|++||......++.+ +|||||||++|||++|+.||..... ................ + ....
T Consensus 178 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~ 247 (361)
T 3uc3_A 178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP--D--------DIRI 247 (361)
T ss_dssp ---CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCC--T--------TSCC
T ss_pred cCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCC--C--------cCCC
Confidence 67889999998876666555 8999999999999999999974332 2222222222211110 0 0011
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...+.+++.+||+.||++|||+.|+++.
T Consensus 248 s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 248 SPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 2347889999999999999999999874
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-40 Score=340.36 Aligned_cols=247 Identities=21% Similarity=0.282 Sum_probs=194.5
Q ss_pred ccccccCCCcceEEEEe-CCCcE----EEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLM----LAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~----vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+++. ||+|.+.... ...+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 96 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYL 96 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeC
Confidence 47899999999999985 44543 8888876443 23356789999999999999999999875 56789999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 97 PLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLE----EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp TTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHH----HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred CCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHH----hCCCCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 999999999742 347899999999999999999999 5799999999999999999999999999987543221
Q ss_pred ----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 ----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 ----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|++||......++.++|||||||++|||+| |+.||.... ..+........... ..
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~---------- 238 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR-LAEVPDLLEKGERL-AQ---------- 238 (325)
T ss_dssp CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-TTHHHHHHHTTCBC-CC----------
T ss_pred cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC-HHHHHHHHHcCCCC-CC----------
Confidence 23445668999999988889999999999999999999 999987432 22222222221111 00
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+......+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 239 PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 011122477889999999999999999999999988654
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-39 Score=330.29 Aligned_cols=239 Identities=16% Similarity=0.235 Sum_probs=187.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---------------------------CHHHHHHHHHHhccCCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---------------------------SSEDFKNRMQKIDHVKHPN 402 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---------------------------~~~~~~~ei~~l~~l~H~n 402 (626)
.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 47899999999999985 5689999999865431 1246889999999999999
Q ss_pred ccccceEEEe--CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCee
Q 006903 403 VLPPLAYYCS--KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNIL 480 (626)
Q Consensus 403 Iv~l~g~~~~--~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NIL 480 (626)
|+++++++.. .+..++||||+++|+|.+++. ...+++..+..++.|++.||.||| +.+|+||||||+|||
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLH----YQKIIHRDIKPSNLL 169 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEE
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEE
Confidence 9999999986 567899999999999988763 246999999999999999999999 579999999999999
Q ss_pred eCCCCCeEEeeccCccccCCCc---cccccccccchhhccccCC---CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH
Q 006903 481 FNNNMEPCISEYGLIVTENHDQ---SFLAQTSSLKINDISNQMC---STIKADVYGFGVILLELLTGKLVQNNGFNLATW 554 (626)
Q Consensus 481 l~~~~~~kl~DFGl~~~~~~~~---~~~~~~~~~~~pe~~~~~~---~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~ 554 (626)
++.++.+||+|||++....... ....++..|++||...... ++.++|||||||++|||++|+.||.... ...+
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-~~~~ 248 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER-IMCL 248 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHH
T ss_pred ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc-HHHH
Confidence 9999999999999987543322 2346788999999886554 3678999999999999999999997542 2233
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+........ + .......+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~--~--------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 249 HSKIKSQALEFP--D--------QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHCCCCCC--S--------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHhcccCCCC--C--------ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 322222211100 0 0112234788999999999999999999875
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=329.20 Aligned_cols=248 Identities=23% Similarity=0.371 Sum_probs=202.3
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...++..||||.++......+.+.+|++++++++||||+++++++. .+..++||||+++|+|.+
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~ 96 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVD 96 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHH
Confidence 4789999999999999888889999999877677889999999999999999999999876 456899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
++... ....+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||++....... ....
T Consensus 97 ~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 171 (279)
T 1qpc_A 97 FLKTP-SGIKLTINKLLDMAAQIAEGMAFIE----ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 171 (279)
T ss_dssp HTTSH-HHHTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCC
T ss_pred HHhcC-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCC
Confidence 99631 1226899999999999999999999 5799999999999999999999999999987543322 1223
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++|||+| |+.||... ...+......... ... ........+
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~-~~~----------~~~~~~~~l 239 (279)
T 1qpc_A 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY-RMV----------RPDNCPEEL 239 (279)
T ss_dssp CCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC-CHHHHHHHHHTTC-CCC----------CCTTCCHHH
T ss_pred CccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc-CHHHHHHHHhccc-CCC----------CcccccHHH
Confidence 4567999999877778899999999999999999 88888643 2233333322221 110 011123458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+++.+||+.||++|||+.++++.|+++...
T Consensus 240 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 240 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 8899999999999999999999999998654
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=344.86 Aligned_cols=234 Identities=17% Similarity=0.266 Sum_probs=189.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.++||+|+||.||+|+. .+++.||+|++++... ..+.+.+|..++.++ +|||||++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 47899999999999995 4688999999976432 224578899998876 89999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc---CCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE---NHD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~---~~~ 501 (626)
+|+|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.. ...
T Consensus 137 gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH----~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~ 209 (396)
T 4dc2_A 137 GGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 209 (396)
T ss_dssp TCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCc
Confidence 9999999963 246999999999999999999999 579999999999999999999999999998752 222
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc-------hhH-HHHHHhhcccccccccHHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN-------LAT-WVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~-------~~~-~~~~~~~~~~~~~~~d~~~~ 573 (626)
.....+++.|++||+.....++.++|||||||++|||++|+.||..... ..+ ....+......
T Consensus 210 ~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--------- 280 (396)
T 4dc2_A 210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--------- 280 (396)
T ss_dssp BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC---------
T ss_pred cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC---------
Confidence 3445789999999999888899999999999999999999999963211 111 11222211110
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCH
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
.+......+.+++.+||+.||++||++
T Consensus 281 ---~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 ---IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ---CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 111123357889999999999999996
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=348.28 Aligned_cols=242 Identities=17% Similarity=0.232 Sum_probs=196.1
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|. ..+|+.||+|++...... .+.+.+|+++++.++||||+++++++.+++..++||||+++|
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 95 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence 5789999999999998 457999999999765432 356889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC---CCCCeEEeeccCccccCCCc-
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN---NNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGl~~~~~~~~- 502 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++ +++.+||+|||++.......
T Consensus 96 ~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH----~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~ 168 (444)
T 3soa_A 96 ELFEDIVA---REYYSEADASHCIQQILEAVLHCH----QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168 (444)
T ss_dssp BHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred CHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence 99999964 246899999999999999999999 57999999999999998 46789999999987544322
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
....+++.|++||......++.++||||+||++|||++|+.||.... ..+....+........ .+ ....
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~-~~~~~~~i~~~~~~~~--~~------~~~~ 239 (444)
T 3soa_A 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-QHRLYQQIKAGAYDFP--SP------EWDT 239 (444)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHTCCCCC--TT------TTTT
T ss_pred eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHHhCCCCCC--cc------cccc
Confidence 23568899999999988888999999999999999999999997543 3333333333221111 00 0011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....+.+++.+||+.||++|||+.|+++
T Consensus 240 ~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 240 VTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 2235788999999999999999999987
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=341.24 Aligned_cols=251 Identities=17% Similarity=0.238 Sum_probs=196.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-----CCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-----HPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-----H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+. .+++.||||+++......+.+..|+++++.++ ||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 47899999999999995 57899999999764444567888999998886 999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---------------------
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN--------------------- 483 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~--------------------- 483 (626)
+++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~ 193 (360)
T 3llt_A 119 GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLR----KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI 193 (360)
T ss_dssp CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEE
T ss_pred CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCcccEEEccccccccccchhcccccccccc
Confidence 89999999753 2346899999999999999999999 679999999999999985
Q ss_pred ----CCCeEEeeccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHh
Q 006903 484 ----NMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 484 ----~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~ 559 (626)
++.+||+|||++...........++..|++||......++.++|||||||++|||+||+.||...... +....+.
T Consensus 194 ~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~ 272 (360)
T 3llt_A 194 YRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHM-EHLAMME 272 (360)
T ss_dssp EEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH
T ss_pred cccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHH-HHHHHHH
Confidence 78899999999987655555567888999999998888999999999999999999999999754322 2111111
Q ss_pred hc--ccccccccHH-----------------HHhhh---------------ccHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 006903 560 RE--EWTVEVFDEV-----------------LIAEA---------------ASEERMLKLLQVALRCINQSPNERPSMNQ 605 (626)
Q Consensus 560 ~~--~~~~~~~d~~-----------------~~~~~---------------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 605 (626)
.. .......... ..... ........+.+++.+||+.||++|||++|
T Consensus 273 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~e 352 (360)
T 3llt_A 273 SIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAE 352 (360)
T ss_dssp HHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred HhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHH
Confidence 10 0000000000 00000 00001145779999999999999999999
Q ss_pred HHH
Q 006903 606 VAV 608 (626)
Q Consensus 606 v~~ 608 (626)
+++
T Consensus 353 lL~ 355 (360)
T 3llt_A 353 LLK 355 (360)
T ss_dssp HTT
T ss_pred Hhc
Confidence 975
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=329.60 Aligned_cols=252 Identities=19% Similarity=0.239 Sum_probs=202.6
Q ss_pred cccccCCCcceEEEEeC---CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVLD---DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||+|+||.||+|... ++..||||.++.... ..+.+.+|++++++++||||+++++++ ..+..++||||+++|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 48999999999999853 578899999986532 346789999999999999999999998 556799999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---- 502 (626)
+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 95 PLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLE----EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp EHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHH----HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 99999963 3456999999999999999999999 5799999999999999999999999999987543222
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
....++..|++||......++.++|||||||++|||+| |+.||..... .+....+..... .. .+.
T Consensus 169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~~~i~~~~~-~~----------~~~ 236 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-PEVMAFIEQGKR-ME----------CPP 236 (287)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-HHHHHHHHTTCC-CC----------CCT
T ss_pred ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-HHHHHHHhcCCc-CC----------CCC
Confidence 12234677999999887778999999999999999999 9999875332 233222222211 11 111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccccccc
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSIS 622 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~ 622 (626)
.....+.+++.+||+.||++||++.|+++.|+++..+......
T Consensus 237 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~ 279 (287)
T 1u59_A 237 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE 279 (287)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCS
T ss_pred CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCccc
Confidence 2234588899999999999999999999999999876554443
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-40 Score=338.68 Aligned_cols=260 Identities=20% Similarity=0.261 Sum_probs=198.8
Q ss_pred ccccccCCCcceEEEEeC-----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVLD-----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~E 421 (626)
.+.||+|+||.||++.+. +++.||||+++.... ..+.+.+|++++++++||||+++++++... ...++|||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 115 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence 478999999999998642 688999999986542 235689999999999999999999999874 57899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++.. ..+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 116 ~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 116 YVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLH----AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp CCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred cccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 9999999999964 24899999999999999999999 579999999999999999999999999998764332
Q ss_pred c------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHH--
Q 006903 502 Q------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLI-- 573 (626)
Q Consensus 502 ~------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-- 573 (626)
. ....++..|++||......++.++|||||||++|||+||+.||..........................+.
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 2 22345667999999887778899999999999999999999986321100000000000000000000000
Q ss_pred -hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 574 -AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 574 -~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
...........+.+++.+||+.||++|||+.|+++.|+.+.+...
T Consensus 268 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 000112234468899999999999999999999999999987654
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=341.83 Aligned_cols=244 Identities=20% Similarity=0.298 Sum_probs=198.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+|+.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||+++|+|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L 135 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcH
Confidence 47899999999999985 468999999987644 2345789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC--CCCeEEeeccCccccCCCc--cc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN--NMEPCISEYGLIVTENHDQ--SF 504 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGl~~~~~~~~--~~ 504 (626)
.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||+++...... ..
T Consensus 136 ~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~ 209 (387)
T 1kob_A 136 FDRIAA--EDYKMSEAEVINYMRQACEGLKHMH----EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209 (387)
T ss_dssp HHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEE
T ss_pred HHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceee
Confidence 999963 2346899999999999999999999 579999999999999974 5779999999987644322 33
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++|||||||++|||+||+.||..... .+....+....+... .. ........
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-~~~~~~i~~~~~~~~---~~-----~~~~~s~~ 280 (387)
T 1kob_A 210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-LETLQNVKRCDWEFD---ED-----AFSSVSPE 280 (387)
T ss_dssp ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHHCCCCCC---SS-----TTTTSCHH
T ss_pred eccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCC---cc-----ccccCCHH
Confidence 4678899999999888889999999999999999999999975432 333333333222111 00 00112335
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+.+++.+||+.||++|||+.|+++.
T Consensus 281 ~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 281 AKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHcCCChhHCcCHHHHhhC
Confidence 7889999999999999999999873
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=339.97 Aligned_cols=237 Identities=19% Similarity=0.283 Sum_probs=195.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+. .+|+.||||+++... ...+.+..|.+++..+ +||||+++++++.+.+..|+||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 47899999999999996 468999999997542 3456688899998876 99999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~ 501 (626)
+|+|.+++.. ...+++..+..++.|++.||.||| ++||+||||||+|||++.++.+||+|||+++... ..
T Consensus 102 gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 174 (345)
T 1xjd_A 102 GGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 174 (345)
T ss_dssp TCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCc
Confidence 9999999963 246899999999999999999999 5799999999999999999999999999987532 22
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||......++.++|||||||++|||++|+.||... +..+....+....... +...
T Consensus 175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~ 241 (345)
T 1xjd_A 175 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ-DEEELFHSIRMDNPFY------------PRWL 241 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTTS
T ss_pred ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHhCCCCC------------Cccc
Confidence 33456889999999998888899999999999999999999999743 3333333333322110 1111
Q ss_pred HHHHHHHHhhccCCCCCCCCCHH-HHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMN-QVA 607 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~-ev~ 607 (626)
...+.+++.+||+.||++||++. |+.
T Consensus 242 s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 242 EKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 23478899999999999999997 664
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=340.11 Aligned_cols=256 Identities=25% Similarity=0.346 Sum_probs=189.9
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHH--HHHHHhccCCCCCccccceEEEe-----CCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFK--NRMQKIDHVKHPNVLPPLAYYCS-----KQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~--~ei~~l~~l~H~nIv~l~g~~~~-----~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|+. +++.||||++.... ...+. .|+..+..++||||+++++++.. ....++||||+
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 94 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYY 94 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecC
Confidence 47899999999999987 68999999986533 33444 44445666899999999986543 23578999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCC---------CceeccCCCCCeeeCCCCCeEEeeccC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED---------GIAHGNLKSNNILFNNNMEPCISEYGL 494 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~---------~ivHrDlkp~NILl~~~~~~kl~DFGl 494 (626)
++|+|.+++... ..++..+..++.|++.||.||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 95 ~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH----~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~ 166 (336)
T 3g2f_A 95 PNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLH----TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166 (336)
T ss_dssp TTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHH----CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred CCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHH----hhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence 999999999642 3589999999999999999999 55 999999999999999999999999999
Q ss_pred ccccCCC-----------ccccccccccchhhcccc-------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--
Q 006903 495 IVTENHD-----------QSFLAQTSSLKINDISNQ-------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW-- 554 (626)
Q Consensus 495 ~~~~~~~-----------~~~~~~~~~~~~pe~~~~-------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~-- 554 (626)
++..... .....++..|++||.... ..++.++|||||||++|||+||..|+..+....++
T Consensus 167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~ 246 (336)
T 3g2f_A 167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246 (336)
T ss_dssp CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence 8653321 112357889999998765 34467899999999999999998876533221110
Q ss_pred --------------HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccccc
Q 006903 555 --------------VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERS 620 (626)
Q Consensus 555 --------------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 620 (626)
.............+... ..........+.+++.+||+.||++|||++|+++.|+++.....+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEA---WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT---CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred hhhcccCCCchHHHHHhhhcccccCCCCCcc---cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence 00111100000000000 0011234557999999999999999999999999999998765544
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=330.37 Aligned_cols=248 Identities=20% Similarity=0.318 Sum_probs=193.6
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeC-CeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK-QEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||++... |+.||||.++.. ...+.+.+|++++++++||||+++++++... +..++||||+++|+|.
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~ 103 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecch-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHH
Confidence 478999999999999874 889999999754 3557899999999999999999999987654 4689999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTS 509 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~ 509 (626)
+++... ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...........++.
T Consensus 104 ~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 178 (278)
T 1byg_A 104 DYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 178 (278)
T ss_dssp HHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCT
T ss_pred HHHHhc-ccccCCHHHHHHHHHHHHHHHHHHH----hCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccc
Confidence 999632 1123789999999999999999999 57999999999999999999999999999876544444445677
Q ss_pred ccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHH
Q 006903 510 SLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQV 588 (626)
Q Consensus 510 ~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 588 (626)
.|++||......++.++||||||+++|||+| |+.||... +..+......... ... ........+.++
T Consensus 179 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~-~~~~~~~~~~~~~-~~~----------~~~~~~~~l~~l 246 (278)
T 1byg_A 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGY-KMD----------APDGCPPAVYEV 246 (278)
T ss_dssp TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-CGGGHHHHHTTTC-CCC----------CCTTCCHHHHHH
T ss_pred cccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHhcCC-CCC----------CcccCCHHHHHH
Confidence 8999999888888999999999999999999 99988643 2223332222211 111 111223458889
Q ss_pred HhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 589 ALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 589 ~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
+.+||+.||++|||+.|+++.|++++..+
T Consensus 247 i~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 247 MKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 99999999999999999999999987643
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=329.50 Aligned_cols=251 Identities=19% Similarity=0.313 Sum_probs=191.7
Q ss_pred cccccccCCCcceEEEEeC----CCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCe-----EE
Q 006903 350 PAELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQE-----KL 417 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~-----~~ 417 (626)
..+.||+|+||.||+|... ++..||+|.++...... +.+.+|++++++++||||+++++++...+. .+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 4578999999999999743 35689999997654333 568899999999999999999999887553 49
Q ss_pred EEEeecCCCChhHhhcCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccC
Q 006903 418 LVYEYQPNGSLFNLLHGS---ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL 494 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 494 (626)
+||||+++|+|.+++... .....+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dikp~NIli~~~~~~kl~Dfg~ 193 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS----NRNFLHRDLAARNCMLRDDMTVCVADFGL 193 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH----TTTCCCCCCSGGGEEECTTSCEEECSCSC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCcEEEeecCc
Confidence 999999999999998432 23357999999999999999999999 68999999999999999999999999999
Q ss_pred ccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 495 IVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 495 ~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
+...... .....++..|++||......++.++||||||+++|||+| |+.||.... ..+........... .
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~-- 269 (313)
T 3brb_A 194 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ-NHEMYDYLLHGHRL-K-- 269 (313)
T ss_dssp C----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-GGGHHHHHHTTCCC-C--
T ss_pred ceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC-HHHHHHHHHcCCCC-C--
Confidence 8653221 123345667999999888888999999999999999999 788876432 22333322222111 1
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++|||+.++++.|+++...
T Consensus 270 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 270 --------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp --------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1112234588899999999999999999999999998753
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=337.23 Aligned_cols=234 Identities=18% Similarity=0.262 Sum_probs=189.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+. .+++.||+|+++..... .+.+.+|+.++.++ +||||+++++++.+.+..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 47899999999999995 46899999999765422 24578899999887 89999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~ 501 (626)
+|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++... ..
T Consensus 94 gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~ 166 (345)
T 3a8x_A 94 GGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 166 (345)
T ss_dssp SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCC
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCc
Confidence 9999999963 246899999999999999999999 5799999999999999999999999999987522 22
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc-------hhH-HHHHHhhcccccccccHHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN-------LAT-WVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~-------~~~-~~~~~~~~~~~~~~~d~~~~ 573 (626)
.....+++.|++||+.....++.++|||||||++|||++|+.||..... ... ....+......
T Consensus 167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--------- 237 (345)
T 3a8x_A 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--------- 237 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC---------
T ss_pred ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC---------
Confidence 3345688999999999888889999999999999999999999963211 111 11122111110
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCH
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
.+......+.+++.+||+.||++||++
T Consensus 238 ---~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 ---IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ---CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 111123357889999999999999996
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-39 Score=331.52 Aligned_cols=257 Identities=19% Similarity=0.224 Sum_probs=189.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .+|+.||+|+++... ...+.+.+|++++++++||||+++++++..++..++||||++ |+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 88 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-ND 88 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CB
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CC
Confidence 37899999999999985 568999999987543 234678999999999999999999999999999999999998 59
Q ss_pred hhHhhcCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 428 LFNLLHGS---ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 428 L~~~l~~~---~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
|.+++... .....+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||+++.....
T Consensus 89 L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (317)
T 2pmi_A 89 LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH----ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164 (317)
T ss_dssp HHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC
T ss_pred HHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCccc
Confidence 99988532 12246899999999999999999999 579999999999999999999999999998754322
Q ss_pred ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-ccc-ccc-----------
Q 006903 502 QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-EWT-VEV----------- 567 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-~~~-~~~----------- 567 (626)
.....++..|++||.... ..++.++|||||||++|||+||+.||...... +....+... ... ...
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 243 (317)
T 2pmi_A 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGTPNESLWPSVTKLPKYN 243 (317)
T ss_dssp CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCTTTCGGGGGCTTCC
T ss_pred CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhHhhhhhhhhhcc
Confidence 223456888999998765 45799999999999999999999999754332 222222110 000 000
Q ss_pred ----------ccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 568 ----------FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 568 ----------~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
+...+ ...........+.+++.+||+.||++|||++|+++ .+.+..
T Consensus 244 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 301 (317)
T 2pmi_A 244 PNIQQRPPRDLRQVL-QPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY 301 (317)
T ss_dssp TTCCCCCCCCSHHHH-GGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred cccccccchhHHHhh-cccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence 00000 00001112345889999999999999999999986 355443
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=338.55 Aligned_cols=240 Identities=18% Similarity=0.242 Sum_probs=193.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+|+.||||++...... .+++.+|++++++++||||+++++++..++..++||||+.
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~- 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence 47899999999999984 67999999999754432 2468899999999999999999999999999999999997
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... ...
T Consensus 138 g~l~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-~~~ 210 (348)
T 1u5q_A 138 GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NSF 210 (348)
T ss_dssp EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-CCC
T ss_pred CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-Ccc
Confidence 688888853 2356899999999999999999999 579999999999999999999999999998765433 234
Q ss_pred ccccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 506 AQTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 506 ~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
.++..|++||... ...++.++|||||||++|||+||+.||...... ............. .. .....
T Consensus 211 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~-~~---------~~~~~ 279 (348)
T 1u5q_A 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNESPA-LQ---------SGHWS 279 (348)
T ss_dssp CSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCCC-CC---------CTTSC
T ss_pred cCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcCCCC-CC---------CCCCC
Confidence 6788999999874 456788999999999999999999998754333 2222332222111 00 01122
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+.+++.+||+.||++|||++++++.
T Consensus 280 ~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 280 EYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 347789999999999999999999764
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=335.31 Aligned_cols=248 Identities=18% Similarity=0.279 Sum_probs=195.7
Q ss_pred ccccccCCCcceEEEEeCC-----CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLDD-----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~-----g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.... +..||||.++.... ....+.+|++++++++||||+++++++...+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 4789999999999998532 34699999976432 2356889999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++.. ....+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 129 ~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 129 ENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLA----NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp TTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred CCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 99999999974 2356899999999999999999999 5799999999999999999999999999986543221
Q ss_pred -----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 -----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 -----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
....++..|++||......++.++|||||||++|||+| |+.||... ...+....+.......
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-~~~~~~~~~~~~~~~~----------- 270 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-SNHEVMKAINDGFRLP----------- 270 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTTCCCC-----------
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC-CHHHHHHHHHCCCcCC-----------
Confidence 11233567999999888888999999999999999999 99998643 2233333322221110
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++||++.|+++.|+++...
T Consensus 271 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 271 TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0111233578899999999999999999999999988654
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=333.47 Aligned_cols=262 Identities=23% Similarity=0.398 Sum_probs=203.9
Q ss_pred cccchhhhhcccccccccCCCcceEEEEe-CCCcE--EEEEEcCCCC--CCHHHHHHHHHHhccC-CCCCccccceEEEe
Q 006903 339 NKLKFEDLLRAPAELLGRGKHGSLYRVVL-DDGLM--LAVKRLRDWS--ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCS 412 (626)
Q Consensus 339 ~~~~~~~l~~~~~~~lG~G~fG~Vy~~~~-~~g~~--vAvK~l~~~~--~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~ 412 (626)
+.+.++++. ..+.||+|+||.||+|.. .++.. +|+|.++... ...+.+.+|+++++++ +||||+++++++.+
T Consensus 20 p~~~~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 97 (327)
T 1fvr_A 20 PVLDWNDIK--FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH 97 (327)
T ss_dssp SBCCGGGCE--EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE
T ss_pred ccccHHHcc--ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee
Confidence 344445443 358899999999999985 45664 4999987533 2346789999999999 99999999999999
Q ss_pred CCeEEEEEeecCCCChhHhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCe
Q 006903 413 KQEKLLVYEYQPNGSLFNLLHGSE-------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNI 479 (626)
Q Consensus 413 ~~~~~lv~Ey~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NI 479 (626)
.+..++||||+++|+|.+++.... ....+++..++.++.|++.||.||| +.+|+||||||+||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NI 173 (327)
T 1fvr_A 98 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNI 173 (327)
T ss_dssp TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGE
T ss_pred CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCccceE
Confidence 999999999999999999997532 1247899999999999999999999 57999999999999
Q ss_pred eeCCCCCeEEeeccCccccCC--CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHH
Q 006903 480 LFNNNMEPCISEYGLIVTENH--DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVH 556 (626)
Q Consensus 480 Ll~~~~~~kl~DFGl~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~ 556 (626)
|++.++.+||+|||+++.... ......++..|++||......++.++|||||||++|||+| |+.||... ...+...
T Consensus 174 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-~~~~~~~ 252 (327)
T 1fvr_A 174 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYE 252 (327)
T ss_dssp EECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHH
T ss_pred EEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC-cHHHHHH
Confidence 999999999999999864322 1223345677999999887778999999999999999998 99998643 3333333
Q ss_pred HHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 557 SVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 557 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
.+.... ... ........+.+++.+||+.||++|||++|+++.|+++..+..
T Consensus 253 ~~~~~~-~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 253 KLPQGY-RLE----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp HGGGTC-CCC----------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred HhhcCC-CCC----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 332221 110 011122358889999999999999999999999999876543
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-39 Score=340.71 Aligned_cols=239 Identities=17% Similarity=0.244 Sum_probs=194.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|+++++.++|||||++++++.+.+..++||||+++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g 99 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 47899999999999985 468999999986432 3446788999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC--Ccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--DQS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--~~~ 503 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||++..... ...
T Consensus 100 g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 172 (384)
T 4fr4_A 100 GDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQ----NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT 172 (384)
T ss_dssp EEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBC
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCcee
Confidence 999999963 356999999999999999999999 67999999999999999999999999999875432 234
Q ss_pred ccccccccchhhcccc---CCCCCcchhHHHHHHHHHHHcCCCCCCCC--cchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 504 FLAQTSSLKINDISNQ---MCSTIKADVYGFGVILLELLTGKLVQNNG--FNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~---~~~~~k~DVwSfGvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
...+++.|++||+... ..++.++|||||||++|||+||+.||... ....+........... .+
T Consensus 173 ~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~------------~p 240 (384)
T 4fr4_A 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT------------YP 240 (384)
T ss_dssp CCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC------------CC
T ss_pred ccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC------------CC
Confidence 4568899999998753 34788999999999999999999999632 2222322222221110 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPS-MNQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs-~~ev~~ 608 (626)
......+.+++.+||+.||++||+ ++++.+
T Consensus 241 ~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 241 SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 112345888999999999999998 666654
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=338.62 Aligned_cols=255 Identities=16% Similarity=0.188 Sum_probs=190.8
Q ss_pred ccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC------------CHHHHHHHHHHhccCCCCCccccceEEEe--
Q 006903 351 AELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI------------SSEDFKNRMQKIDHVKHPNVLPPLAYYCS-- 412 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~------------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-- 412 (626)
.+.||+|+||.||+|... ++..||||++..... ..+.+.+|+..++.++||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 478999999999999964 578999999875432 12346678888999999999999999988
Q ss_pred --CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC--CeE
Q 006903 413 --KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM--EPC 488 (626)
Q Consensus 413 --~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~--~~k 488 (626)
....++||||+ +++|.+++... ..+++..++.++.|++.||.||| +.+|+||||||+|||++.++ .+|
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIH----ENEYVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEESSSTTSEE
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCcCHHHEEEccCCCCcEE
Confidence 67889999999 99999999642 37999999999999999999999 57999999999999999887 999
Q ss_pred EeeccCccccCCC----------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHH
Q 006903 489 ISEYGLIVTENHD----------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV 558 (626)
Q Consensus 489 l~DFGl~~~~~~~----------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~ 558 (626)
|+|||+++..... .....++..|++||......++.++|||||||++|||+||+.||.............
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 273 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA 273 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence 9999998653211 123457889999999888888999999999999999999999996432221111111
Q ss_pred hhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 559 VREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 559 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
... .... .................+.+++.+||+.||++|||+++|++.|+++..
T Consensus 274 ~~~-~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 274 KTN-LLDE-LPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHH-HHHT-TTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHh-hccc-ccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 110 0000 111110000001233468899999999999999999999999998654
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-39 Score=329.52 Aligned_cols=259 Identities=19% Similarity=0.284 Sum_probs=195.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 116 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCS
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCC
Confidence 47899999999999985 5799999999976432 235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 426 GSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 426 g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
|+|.+++... .....+++..++.++.+++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 117 ~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 192 (310)
T 2wqm_A 117 GDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 192 (310)
T ss_dssp CBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCC------------
T ss_pred CCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcc
Confidence 9999998531 12356899999999999999999999 579999999999999999999999999998653322
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc-chhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF-NLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
.....++..|++||......++.++||||||+++|||++|+.||.... +............... .. ...
T Consensus 193 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~ 262 (310)
T 2wqm_A 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP-LP---------SDH 262 (310)
T ss_dssp ------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCC-CC---------TTT
T ss_pred ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCC-Cc---------ccc
Confidence 123456788999999888888999999999999999999999986432 2223333322221111 00 011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcccccccc
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSISS 623 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~~ 623 (626)
....+.+++.+||+.||++|||+.++++.|++++.......++
T Consensus 263 ~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~~~ 305 (310)
T 2wqm_A 263 YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLEH 305 (310)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-----
T ss_pred cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhhhh
Confidence 2235888999999999999999999999999998876665554
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=344.44 Aligned_cols=262 Identities=18% Similarity=0.245 Sum_probs=205.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCC--eEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ--EKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~--~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +|+.||||+++... ...+.+.+|++++++++||||+++++++...+ ..++||||+++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 478999999999999954 58999999997543 34577889999999999999999999988765 67999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee----CCCCCeEEeeccCccccCCC
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF----NNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+|.+++........+++..++.++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 94 g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 94 GSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR----ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp EEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH----HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 999999975444445999999999999999999999 5799999999999999 77888999999998764332
Q ss_pred c--cccccccccchhhcccc--------CCCCCcchhHHHHHHHHHHHcCCCCCCCC---cchhHHHHHHhhccccccc-
Q 006903 502 Q--SFLAQTSSLKINDISNQ--------MCSTIKADVYGFGVILLELLTGKLVQNNG---FNLATWVHSVVREEWTVEV- 567 (626)
Q Consensus 502 ~--~~~~~~~~~~~pe~~~~--------~~~~~k~DVwSfGvvl~elltg~~p~~~~---~~~~~~~~~~~~~~~~~~~- 567 (626)
. ....++..|++||.... ..++.++|||||||++|||+||+.||... ....+.+............
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (396)
T 4eut_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (396)
T ss_dssp GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCE
T ss_pred CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccch
Confidence 2 23457889999998654 34577999999999999999999998632 2223333333332111000
Q ss_pred -----------ccHHH-HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 568 -----------FDEVL-IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 568 -----------~d~~~-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+.... ............+.+++.+||+.||++||++.|+++.++++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 00000 01122355666788999999999999999999999999988654
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-39 Score=330.17 Aligned_cols=243 Identities=21% Similarity=0.249 Sum_probs=189.3
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC-CCHHHHHHHHHHhcc-CCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDH-VKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~-l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|. ..+++.||||++.... ...+.+.+|++++.+ .+||||+++++++.+++..++||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 4689999999999999 4579999999997654 345789999999988 479999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC---eEEeeccCccccCCC---
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME---PCISEYGLIVTENHD--- 501 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl~~~~~~~--- 501 (626)
|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||++......
T Consensus 98 L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 98 ILSHIHK---RRHFNELEASVVVQDVASALDFLH----NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999964 246899999999999999999999 579999999999999998776 999999997643211
Q ss_pred -------ccccccccccchhhcccc-----CCCCCcchhHHHHHHHHHHHcCCCCCCCCcch--------------hHHH
Q 006903 502 -------QSFLAQTSSLKINDISNQ-----MCSTIKADVYGFGVILLELLTGKLVQNNGFNL--------------ATWV 555 (626)
Q Consensus 502 -------~~~~~~~~~~~~pe~~~~-----~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~--------------~~~~ 555 (626)
.....++..|++||.... ..++.++|||||||++|||+||+.||...... ....
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 112347888999998754 34688999999999999999999998643211 1111
Q ss_pred HHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 556 HSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 556 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+...... .... . . ......+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~i~~~~~~--~~~~-~-~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 251 ESIQEGKYE--FPDK-D-W----AHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHCCCC--CCHH-H-H----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhccCcc--cCch-h-c----ccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 122111110 0000 0 0 012345889999999999999999999987
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=332.38 Aligned_cols=237 Identities=18% Similarity=0.201 Sum_probs=185.7
Q ss_pred cccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCH---HHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 350 PAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISS---EDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
..+.||+|+||+||+|... +|+.||||++....... ..+..|+..+.++ +||||+++++++...+..++||||+
T Consensus 61 ~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~- 139 (311)
T 3p1a_A 61 RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC- 139 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-
T ss_pred eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-
Confidence 3478999999999999965 79999999987654433 2345555555444 8999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--c
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--Q 502 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~ 502 (626)
+|+|.+++... ...++|..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... .
T Consensus 140 ~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 140 GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLH----SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 67999988642 356999999999999999999999 578999999999999999999999999998654332 2
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||.... .++.++|||||||++|||++|..|+...... ....... ..+... ....
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~----~~~~~~~-----~~~~~~-----~~~~ 278 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW----QQLRQGY-----LPPEFT-----AGLS 278 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH----HHHTTTC-----CCHHHH-----TTSC
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH----HHHhccC-----CCcccc-----cCCC
Confidence 33457889999998765 6899999999999999999998776543221 1111111 111111 1123
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||++|+++
T Consensus 279 ~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 279 SELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 45889999999999999999999976
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=332.95 Aligned_cols=252 Identities=19% Similarity=0.274 Sum_probs=200.1
Q ss_pred cccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCC-eEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQ-EKLLV 419 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~-~~~lv 419 (626)
..+.||+|+||.||+|.. .+++.||||.++.... ..+.+.+|++++.++ +||||+++++++...+ ..++|
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv 110 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence 357899999999999973 3578999999976543 235688999999999 7999999999988755 48999
Q ss_pred EeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC
Q 006903 420 YEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME 486 (626)
Q Consensus 420 ~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~ 486 (626)
|||+++|+|.+++..... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dikp~Nil~~~~~~ 186 (316)
T 2xir_A 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSEKNV 186 (316)
T ss_dssp EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGC
T ss_pred EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH----hCCcccccCccceEEECCCCC
Confidence 999999999999975332 123889999999999999999999 579999999999999999999
Q ss_pred eEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhh
Q 006903 487 PCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVR 560 (626)
Q Consensus 487 ~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 560 (626)
+||+|||+++...... ....++..|++||......++.++|||||||++|||+| |+.||...............
T Consensus 187 ~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~ 266 (316)
T 2xir_A 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266 (316)
T ss_dssp EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH
T ss_pred EEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhcc
Confidence 9999999987543222 12345678999999888888999999999999999999 99998754333232222222
Q ss_pred cccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 561 EEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 561 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.. .... +......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 267 ~~-~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 267 GT-RMRA----------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp TC-CCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred Cc-cCCC----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 11 1110 111223588899999999999999999999999998754
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=331.70 Aligned_cols=238 Identities=19% Similarity=0.287 Sum_probs=188.1
Q ss_pred ccccccCCCcceEEEEe----CCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||+++. .+|+.||+|+++... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 101 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILE 101 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEe
Confidence 47899999999999986 478999999997643 123467899999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 102 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 174 (327)
T 3a62_A 102 YLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLH----QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174 (327)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCTTTEEECTTSCEEECCCSCC------
T ss_pred CCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHH----hCCEEcccCCHHHeEECCCCcEEEEeCCcccccccC
Confidence 9999999999963 246889999999999999999999 579999999999999999999999999998653221
Q ss_pred ---ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 502 ---QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 502 ---~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
.....++..|++||......++.++|||||||++|||++|+.||.... ..+....+...... .+
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~~------------~p 241 (327)
T 3a62_A 175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN-RKKTIDKILKCKLN------------LP 241 (327)
T ss_dssp ----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHTCCC------------CC
T ss_pred CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC-HHHHHHHHHhCCCC------------CC
Confidence 233467889999999888888999999999999999999999997543 33333333332211 01
Q ss_pred HHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
......+.+++.+||+.||++|| ++.|+++
T Consensus 242 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 242 PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11223578899999999999999 6778765
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=337.83 Aligned_cols=238 Identities=17% Similarity=0.213 Sum_probs=196.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|.+++..+ +||||+++++++.+.+..|+||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 478999999999999965 58899999997532 3456788999999887 89999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~ 501 (626)
+|+|.+++.. ...+++..+..++.|++.||.||| ++||+||||||+|||++.++.+||+|||+++... ..
T Consensus 105 gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 177 (353)
T 2i0e_A 105 GGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQ----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 177 (353)
T ss_dssp SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcc
Confidence 9999999963 246899999999999999999999 5799999999999999999999999999987532 22
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||+.....++.++|||||||++|||++|+.||... +..+....+....... +...
T Consensus 178 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~ 244 (353)
T 2i0e_A 178 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-DEDELFQSIMEHNVAY------------PKSM 244 (353)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTTS
T ss_pred cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC-CHHHHHHHHHhCCCCC------------CCCC
Confidence 33456889999999998888899999999999999999999999743 3344444444332111 1112
Q ss_pred HHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
...+.+++.+||+.||++||+ ++|+++
T Consensus 245 s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 245 SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 235788999999999999996 466654
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=336.52 Aligned_cols=241 Identities=20% Similarity=0.303 Sum_probs=179.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.||||++... ....+.+|+++++.+. ||||+++++++.++...++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 47899999999999995 46899999998653 3467889999999997 99999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC---CeEEeeccCccccCCC---c
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM---EPCISEYGLIVTENHD---Q 502 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGl~~~~~~~---~ 502 (626)
.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++ .+||+|||+++..... .
T Consensus 94 ~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 166 (325)
T 3kn6_A 94 FERIKK---KKHFSETEASYIMRKLVSAVSHMH----DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166 (325)
T ss_dssp HHHHHH---CSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc
Confidence 999964 356999999999999999999999 57999999999999997665 7999999998754322 2
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc------chhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF------NLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~------~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
....++..|++||......++.++|||||||++|||++|+.||.... ...+....+........ .+
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~------ 238 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE--GE------ 238 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC--SH------
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC--cc------
Confidence 23456888999999988889999999999999999999999997432 12223333332221110 00
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 00112345889999999999999999999874
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=334.23 Aligned_cols=247 Identities=17% Similarity=0.276 Sum_probs=192.9
Q ss_pred ccccccCCCcceEEEEe-CCCc----EEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGL----MLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+++ .||+|.+.... ...+.+.+|++++++++||||+++++++.... .++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~ 98 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLM 98 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEec
Confidence 47899999999999984 3454 46888876543 35578999999999999999999999988654 88999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 99 ~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 99 PFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLE----DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp SSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHh----hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 999999999743 356899999999999999999999 5799999999999999999999999999986532211
Q ss_pred ----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 ----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 ----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|++||......++.++|||||||++|||+| |+.||... ...+............ .
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~-~~~~~~~~~~~~~~~~-----------~ 240 (327)
T 3lzb_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP-----------Q 240 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CGGGHHHHHHTTCCCC-----------C
T ss_pred cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC-CHHHHHHHHHcCCCCC-----------C
Confidence 12234567999999888889999999999999999999 99998643 2222222222211110 0
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 241 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 241 PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 111233578899999999999999999999999988754
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-39 Score=340.77 Aligned_cols=256 Identities=17% Similarity=0.215 Sum_probs=195.5
Q ss_pred ccccccC--CCcceEEEEeC-CCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRG--KHGSLYRVVLD-DGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G--~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+| +||.||+|+.. +|+.||||+++...... +.+.+|+++++.++|||||++++++.+.+..++||||++
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 109 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccC
Confidence 4789999 99999999964 79999999997654333 467889999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC-----
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN----- 499 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~----- 499 (626)
+|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||.+....
T Consensus 110 ~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~ 184 (389)
T 3gni_B 110 YGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIH----HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184 (389)
T ss_dssp TCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEE
T ss_pred CCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEcccccceeecccccc
Confidence 99999999753 2346899999999999999999999 5799999999999999999999999999864321
Q ss_pred -----CCccccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc---
Q 006903 500 -----HDQSFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD--- 569 (626)
Q Consensus 500 -----~~~~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d--- 569 (626)
.......++..|++||.... ..++.++|||||||++|||+||+.||........... ....... ...+
T Consensus 185 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~-~~~~~~~ 262 (389)
T 3gni_B 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE-KLNGTVP-CLLDTST 262 (389)
T ss_dssp CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHH-C--------------
T ss_pred ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HhcCCCC-ccccccc
Confidence 11122356778999998876 5689999999999999999999999975433222211 1110000 0000
Q ss_pred --------------------------------HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhh
Q 006903 570 --------------------------------EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNI 613 (626)
Q Consensus 570 --------------------------------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i 613 (626)
...............+.+++.+||+.||++|||++|+++. ++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 0000000111223458899999999999999999999864 4444
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=338.36 Aligned_cols=237 Identities=18% Similarity=0.272 Sum_probs=191.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+++++.++||||+++++++.+.+..++||||+ +
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~ 92 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-G 92 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-C
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-C
Confidence 47899999999999995 679999999986432 23467899999999999999999999999999999999999 7
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~ 503 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.||+||||||+|||+++++.+||+|||++...... ..
T Consensus 93 g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~ 165 (336)
T 3h4j_B 93 GELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCH----RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK 165 (336)
T ss_dssp EEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTC
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccc
Confidence 899998853 246899999999999999999999 568999999999999999999999999998754332 23
Q ss_pred ccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
...+++.|++||......+ +.++|||||||++|||++|+.||...... ........... ..+....
T Consensus 166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~~~~~i~~~~~------------~~p~~~s 232 (336)
T 3h4j_B 166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-NLFKKVNSCVY------------VMPDFLS 232 (336)
T ss_dssp CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-TCBCCCCSSCC------------CCCTTSC
T ss_pred cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-HHHHHHHcCCC------------CCcccCC
Confidence 4567889999999876655 78999999999999999999999743211 10000000000 0111123
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 233 PGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 35788999999999999999999976
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-39 Score=335.30 Aligned_cols=240 Identities=19% Similarity=0.268 Sum_probs=190.7
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCC--CCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKH--PNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H--~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++...+++.||||++....... +.+.+|++++++++| |||+++++++...+..++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 47899999999999998889999999987654333 568899999999987 999999999999999999999 567
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++ ++.+||+|||+++......
T Consensus 93 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH----~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 164 (343)
T 3dbq_A 93 IDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 164 (343)
T ss_dssp EEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence 899999964 346899999999999999999999 57999999999999997 5789999999987543221
Q ss_pred --cccccccccchhhcccc-----------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 503 --SFLAQTSSLKINDISNQ-----------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~-----------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
....++..|++||.... ..++.++|||||||++|||+||+.||....+..................
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~- 243 (343)
T 3dbq_A 165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP- 243 (343)
T ss_dssp -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC-
T ss_pred cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCc-
Confidence 23467899999998754 5678899999999999999999999976544433333333222111110
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
......+.+++.+||+.||++|||+.|+++.
T Consensus 244 ---------~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 244 ---------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ---------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1112347789999999999999999999864
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=333.91 Aligned_cols=248 Identities=20% Similarity=0.245 Sum_probs=190.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHHHHHhccCCCCCccccceEEEeCCe----EEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE----KLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~----~~lv~E 421 (626)
.+.||+|+||.||+|+. .+++.||||+++..... .+.+.+|++++++++||||+++++++..... .++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 47899999999999994 67999999999765432 2468899999999999999999999876543 499999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++.. ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 97 ~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 97 YVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSH----QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp CCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred cCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 9999999999963 246899999999999999999999 579999999999999999999999999998653221
Q ss_pred ------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 502 ------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.....++..|++||......++.++|||||||++|||+||+.||..... .+........... .+....
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~----~~~~~~- 243 (311)
T 3ork_A 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-VSVAYQHVREDPI----PPSARH- 243 (311)
T ss_dssp ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHCCCC----CHHHHS-
T ss_pred ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHhcCCCC----Cccccc-
Confidence 1223578899999999888889999999999999999999999975433 2222222222111 111111
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHH-HHHHhhh
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVA-VMINNIK 614 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~-~~L~~i~ 614 (626)
......+.+++.+||+.||++||++.+++ ..+..+.
T Consensus 244 ---~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 244 ---EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 11234588899999999999999766554 5555543
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=322.47 Aligned_cols=239 Identities=23% Similarity=0.354 Sum_probs=194.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence 47899999999999985 457899999986432 2346789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-ccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-QSF 504 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-~~~ 504 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... ...
T Consensus 94 ~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH----~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (279)
T 3fdn_A 94 GTVYRELQK---LSKFDEQRTATYITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 166 (279)
T ss_dssp EEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----TTTCEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccc
Confidence 999999963 246899999999999999999999 689999999999999999999999999987553322 233
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++||||||+++|||++|+.||... +..+........... .+......
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~~~~~~~~------------~~~~~~~~ 233 (279)
T 3fdn_A 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-TYQETYKRISRVEFT------------FPDFVTEG 233 (279)
T ss_dssp -CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHHTCCC------------CCTTSCHH
T ss_pred cCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC-cHHHHHHHHHhCCCC------------CCCcCCHH
Confidence 46788899999988888899999999999999999999999743 333333322222111 01112234
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 234 ARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHhccChhhCCCHHHHhhC
Confidence 7789999999999999999999874
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=339.40 Aligned_cols=253 Identities=19% Similarity=0.306 Sum_probs=200.2
Q ss_pred cccccccCCCcceEEEEeC-CC-----cEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVLD-DG-----LMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g-----~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
..+.||+|+||.||+|... ++ ..||+|.++.... ..+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 3578999999999999853 23 4899999976542 235688999999999 8999999999999999999999
Q ss_pred eecCCCChhHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEE
Q 006903 421 EYQPNGSLFNLLHGSE-----------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCI 489 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl 489 (626)
||+++|+|.+++.... ....+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl 205 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA----SKNCIHRDVAARNVLLTNGHVAKI 205 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGCEEEGGGEEEB
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh----cCCcccCCcccceEEECCCCeEEE
Confidence 9999999999996321 1246899999999999999999999 579999999999999999999999
Q ss_pred eeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccc
Q 006903 490 SEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEW 563 (626)
Q Consensus 490 ~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 563 (626)
+|||++....... ....++..|++||......++.++|||||||++|||+| |..||....... ..........
T Consensus 206 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~~~~~~ 284 (333)
T 2i1m_A 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFYKLVKDGY 284 (333)
T ss_dssp CCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHHHHHHHTC
T ss_pred CccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHHHHHhcCC
Confidence 9999987532221 12334567999999888888999999999999999999 888886433222 2222222221
Q ss_pred ccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 564 TVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 564 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.... +......+.+++.+||+.||++|||+.|+++.|+++..+.
T Consensus 285 ~~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 285 QMAQ----------PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp CCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCC----------CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 1110 1111235788999999999999999999999999887654
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=334.21 Aligned_cols=251 Identities=18% Similarity=0.228 Sum_probs=200.8
Q ss_pred cccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
..+.||+|+||.||+|... +++.||||.+..... ....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEE
Confidence 3578999999999999753 478899999976442 23468899999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccC
Q 006903 422 YQPNGSLFNLLHGSE-------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL 494 (626)
Q Consensus 422 y~~~g~L~~~l~~~~-------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 494 (626)
|+++|+|.+++.... ....+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~NIli~~~~~~kl~Dfg~ 184 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGM 184 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH----HCCCccCCCccceEEEcCCCeEEECcCcc
Confidence 999999999996321 1245789999999999999999999 57999999999999999999999999999
Q ss_pred ccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 495 IVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 495 ~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
+....... ....++..|++||......++.++|||||||++|||+| |+.||... +..+........... .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~-~-- 260 (322)
T 1p4o_A 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGLL-D-- 260 (322)
T ss_dssp CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CHHHHHHHHHTTCCC-C--
T ss_pred ccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC-CHHHHHHHHHcCCcC-C--
Confidence 86533221 12234667999999888888999999999999999999 78887643 333333333222211 0
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 261 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 261 --------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred --------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 0112233578899999999999999999999999987554
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=363.56 Aligned_cols=244 Identities=17% Similarity=0.222 Sum_probs=196.4
Q ss_pred cccccCCCcceEEEEe---CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL---DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|.+ .+++.||||+++.... ..+++.+|++++++++|||||++++++. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 5799999999999964 3468899999976543 2468999999999999999999999886 4568899999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++.. ...+++..++.++.||+.||+||| +.+||||||||+|||++.++.+||+|||+++......
T Consensus 454 g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH----~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLE----ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHH----HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999963 346899999999999999999999 5799999999999999999999999999987543221
Q ss_pred ---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 ---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....++..|++||......++.++|||||||++|||+| |+.||.... ..+....+.... ... .+
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-~~~~~~~i~~~~-~~~----------~p 594 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGE-RMG----------CP 594 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHHHTTC-CCC----------CC
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCC-CCC----------CC
Confidence 12234567999999988889999999999999999999 999997432 233333332221 111 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
..+...+.+++.+||+.||++||++++|++.|+++..
T Consensus 595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 1233458899999999999999999999999998754
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=345.01 Aligned_cols=238 Identities=18% Similarity=0.305 Sum_probs=197.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 100 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 478999999999999954 79999999986532 2346789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~ 503 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... ..
T Consensus 101 g~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~ 173 (476)
T 2y94_A 101 GELFDYICK---NGRLDEKESRRLFQQILSGVDYCH----RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 173 (476)
T ss_dssp EEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBC
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCCcccccHHHEEEecCCCeEEEeccchhhcccccccc
Confidence 999999953 356999999999999999999999 689999999999999999999999999998764332 23
Q ss_pred ccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
...+++.|++||......+ +.++|||||||++|||++|+.||... +.......+....... +....
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~s 240 (476)
T 2y94_A 174 TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD-HVPTLFKKICDGIFYT------------PQYLN 240 (476)
T ss_dssp CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS-SSHHHHHHHHTTCCCC------------CTTCC
T ss_pred ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC-CHHHHHHHHhcCCcCC------------CccCC
Confidence 4567889999999876654 68999999999999999999999754 3333334333322110 01112
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 241 PSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 34788999999999999999999987
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=338.78 Aligned_cols=259 Identities=20% Similarity=0.254 Sum_probs=196.9
Q ss_pred cccccccCCCcceEEEEe-----CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEe--CCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL-----DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCS--KQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~--~~~~~lv~E 421 (626)
..+.||+|+||.||+|++ .+++.||||++..... ..+.+.+|++++++++||||+++++++.. ....++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEe
Confidence 357899999999999984 4689999999976542 33568999999999999999999998874 456899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 107 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 107 YLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLG----SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp CCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred ecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 99999999999632 246899999999999999999999 579999999999999999999999999998754322
Q ss_pred c------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc--ccccHHHH
Q 006903 502 Q------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV--EVFDEVLI 573 (626)
Q Consensus 502 ~------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~ 573 (626)
. ....++..|++||......++.++|||||||++|||+||+.||..... +............ ........
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA--EFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH--HHHHHCC----CCHHHHHHHHHH
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccc--hhhhhcccccccccHHHHHHHhh
Confidence 2 223456679999998877788999999999999999999999863211 1110000000000 00000000
Q ss_pred h---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 574 A---EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 574 ~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
. ..........+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 259 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 259 EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 0 001122344688999999999999999999999999988654
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=339.11 Aligned_cols=241 Identities=19% Similarity=0.259 Sum_probs=192.1
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCC--CCCccccceEEEeCCeEEEEEeecC
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVK--HPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~--H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
..+.||+|+||.||+|...+++.||||++...... .+.+.+|++++++++ ||||+++++++..++..++||| +.
T Consensus 60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~ 138 (390)
T 2zmd_A 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 138 (390)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cC
Confidence 35789999999999999888999999999765433 357899999999996 5999999999999999999999 56
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
+|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++.....
T Consensus 139 ~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH----~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 139 NIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp SEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHH----TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 88999999642 46899999999999999999999 68999999999999996 578999999998754322
Q ss_pred --ccccccccccchhhcccc-----------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 502 --QSFLAQTSSLKINDISNQ-----------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~-----------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
.....+++.|++||.... ..++.++|||||||++|||++|+.||....+....+..+..........
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 290 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCC
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCC
Confidence 123468899999998754 3578899999999999999999999976544444444433322111110
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
......+.+++.+||+.||++|||+.|+++.
T Consensus 291 ----------~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 291 ----------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ----------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----------ccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 0112347889999999999999999999863
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=347.24 Aligned_cols=244 Identities=17% Similarity=0.203 Sum_probs=195.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||+||+|+.. +++.||+|++++.. ...+.+.+|+.++..++||||++++++|.+.+..|+||||+++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 478999999999999965 58899999986532 2234588999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++.. ....+++..+..++.|++.||.||| +.+||||||||+|||++.++.+||+|||+++......
T Consensus 159 g~L~~~l~~--~~~~l~e~~~~~~~~qi~~aL~~LH----~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~ 232 (437)
T 4aw2_A 159 GDLLTLLSK--FEDRLPEEMARFYLAEMVIAIDSVH----QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 232 (437)
T ss_dssp CBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred CcHHHHHHH--ccCCCCHHHHHHHHHHHHHHHHHHH----hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcc
Confidence 999999974 2356999999999999999999999 5799999999999999999999999999986543322
Q ss_pred -cccccccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 -SFLAQTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
....+++.|++||+.. ...++.++|||||||++|||+||+.||... +..+....+.......... .
T Consensus 233 ~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p-------~ 304 (437)
T 4aw2_A 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHKERFQFP-------T 304 (437)
T ss_dssp CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCC-------S
T ss_pred cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC-ChhHHHHhhhhccccccCC-------c
Confidence 2346899999999875 456789999999999999999999999754 3333333333211100000 0
Q ss_pred ccHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNE--RPSMNQVAV 608 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~ev~~ 608 (626)
........+.+++.+|+..+|++ ||+++|+++
T Consensus 305 ~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 305 QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 00012234788899999998888 999999976
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-39 Score=347.43 Aligned_cols=239 Identities=18% Similarity=0.246 Sum_probs=189.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+|+.||||+++... .....+.+|+++++.++||||+++++++...+..++||||+++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 232 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence 47899999999999984 579999999987532 2335678899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~ 502 (626)
|+|.+++.. ...+++..+..++.|++.||+|||+ ..||+||||||+|||++.++.+||+|||+++.... ..
T Consensus 233 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 306 (446)
T 4ejn_A 233 GELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHS---EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 306 (446)
T ss_dssp CBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhh---cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCccc
Confidence 999999963 3468999999999999999999994 26899999999999999999999999999875322 22
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||+||+.||.... ..+....+....... +....
T Consensus 307 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~------------p~~~~ 373 (446)
T 4ejn_A 307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-HEKLFELILMEEIRF------------PRTLG 373 (446)
T ss_dssp CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCCCC------------CTTSC
T ss_pred ccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCCCCC------------CccCC
Confidence 34568899999999988889999999999999999999999997543 333333333322110 11122
Q ss_pred HHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
..+.+++.+||+.||++|| +++|+++
T Consensus 374 ~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 374 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 3578899999999999999 9999976
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=327.92 Aligned_cols=243 Identities=19% Similarity=0.261 Sum_probs=198.2
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEE
Confidence 357899999999999995 4689999999875432 35679999999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC----CeEEeeccCccc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM----EPCISEYGLIVT 497 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGl~~~ 497 (626)
|+++++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||++..
T Consensus 96 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH----~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 96 LVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp CCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 9999999999963 346899999999999999999999 57999999999999999888 799999999875
Q ss_pred cCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 498 ENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 498 ~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.... .....++..|++||......++.++|||||||++|||+||+.||.... ..+....+...... .++...
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~---~~~~~~-- 242 (321)
T 2a2a_A 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANITSVSYD---FDEEFF-- 242 (321)
T ss_dssp CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-HHHHHHHHHTTCCC---CCHHHH--
T ss_pred cCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHhcccc---cChhhh--
Confidence 4332 233457889999999888888999999999999999999999997543 23333333222111 111111
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++.+||+.||++|||+.|+++
T Consensus 243 ---~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 243 ---SHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp ---TTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ---cccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 112235788999999999999999999986
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-39 Score=337.96 Aligned_cols=238 Identities=18% Similarity=0.247 Sum_probs=187.5
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC----CHHHHHHHHHH-hccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI----SSEDFKNRMQK-IDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~ei~~-l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+.. +++.||||++++... ..+.+.+|..+ ++.++||||+++++++.+.+..|+||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999954 688999999976542 22456677776 577899999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~ 501 (626)
+|+|.+++.. ...+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||+++... ..
T Consensus 123 gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~ 195 (373)
T 2r5t_A 123 GGELFYHLQR---ERCFLEPRARFYAAEIASALGYLH----SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST 195 (373)
T ss_dssp SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCC
T ss_pred CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCc
Confidence 9999999963 246889999999999999999999 5799999999999999999999999999987522 22
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||+.....++.++|||||||++|||++|+.||... +..+....+....... ....
T Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-~~~~~~~~i~~~~~~~------------~~~~ 262 (373)
T 2r5t_A 196 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-NTAEMYDNILNKPLQL------------KPNI 262 (373)
T ss_dssp CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS-BHHHHHHHHHHSCCCC------------CSSS
T ss_pred cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHhcccCC------------CCCC
Confidence 34456889999999998888999999999999999999999999753 3344444443332110 0111
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++||++.+.+.
T Consensus 263 ~~~~~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 263 TNSARHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred CHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence 234788999999999999999864433
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=323.49 Aligned_cols=243 Identities=18% Similarity=0.288 Sum_probs=196.4
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEe----------------C
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS----------------K 413 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~----------------~ 413 (626)
.+.||+|+||.||+|... +++.||+|+++... +.+.+|++++++++||||+++++++.. .
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKT 92 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCc
Confidence 478999999999999965 79999999987532 567899999999999999999998864 3
Q ss_pred CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeecc
Q 006903 414 QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYG 493 (626)
Q Consensus 414 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 493 (626)
...++||||+++|+|.+++... ....+++..++.++.|++.||.||| +.+|+||||||+||++++++.+||+|||
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 167 (284)
T 2a19_B 93 KCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIH----SKKLINRDLKPSNIFLVDTKQVKIGDFG 167 (284)
T ss_dssp EEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred ceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCCHHHEEEcCCCCEEECcch
Confidence 4579999999999999999642 2356899999999999999999999 5799999999999999999999999999
Q ss_pred CccccCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHH
Q 006903 494 LIVTENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 494 l~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
++...... .....++..|++||......++.++||||||+++|||+||..|+... .......... ...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---~~~~~~~~~~-~~~------ 237 (284)
T 2a19_B 168 LVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET---SKFFTDLRDG-IIS------ 237 (284)
T ss_dssp TCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH---HHHHHHHHTT-CCC------
T ss_pred hheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH---HHHHHHhhcc-ccc------
Confidence 98654332 23345788999999988888899999999999999999999876421 1111111111 111
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
......+.+++.+||+.||++|||+.|+++.|+.++....
T Consensus 238 -------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 238 -------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp -------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred -------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 1112347788999999999999999999999999876544
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=334.81 Aligned_cols=250 Identities=20% Similarity=0.272 Sum_probs=182.3
Q ss_pred cccccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCC-CCCccccceEEE--------eCCeE
Q 006903 348 RAPAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVK-HPNVLPPLAYYC--------SKQEK 416 (626)
Q Consensus 348 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~--------~~~~~ 416 (626)
....+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++.++. ||||+++++++. .....
T Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 34468899999999999995 578999999986543 23457889999999996 999999999984 33457
Q ss_pred EEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeCCCCCeEEeeccC
Q 006903 417 LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFNNNMEPCISEYGL 494 (626)
Q Consensus 417 ~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGl 494 (626)
++||||+. |+|.+++........+++..++.++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||+
T Consensus 110 ~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH----RQKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp EEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH----TSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred EEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----hCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 99999996 799998864334457999999999999999999999 567 99999999999999999999999999
Q ss_pred ccccCCCcc---------------ccccccccchhhcc---ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH
Q 006903 495 IVTENHDQS---------------FLAQTSSLKINDIS---NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH 556 (626)
Q Consensus 495 ~~~~~~~~~---------------~~~~~~~~~~pe~~---~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~ 556 (626)
++....... ...++..|++||.. ....++.++|||||||++|||+||+.||...... ....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~ 263 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-RIVN 263 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-Hhhc
Confidence 875433211 23467889999987 4556788999999999999999999998743221 1111
Q ss_pred HHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 557 SVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 557 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
....... .......+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 264 ----~~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 264 ----GKYSIPP----------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp ------CCCCT----------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ----CcccCCc----------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 1100000 0011123678899999999999999999999999987653
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=338.68 Aligned_cols=255 Identities=16% Similarity=0.145 Sum_probs=196.7
Q ss_pred ccccccCCCcceEEEEeC---------CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccc---------------c
Q 006903 351 AELLGRGKHGSLYRVVLD---------DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLP---------------P 406 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~---------~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~---------------l 406 (626)
.+.||+|+||.||+|... +++.||||.+... +.+.+|++++++++||||++ +
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~ 122 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTC 122 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCccCccch
Confidence 478999999999999965 3789999998753 46889999999999999998 5
Q ss_pred ceEEEe-CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 407 LAYYCS-KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 407 ~g~~~~-~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
++++.. .+..++||||+ +|+|.+++... ....+++..++.++.|++.||.||| +.+|+||||||+|||++.++
T Consensus 123 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dikp~NIl~~~~~ 196 (352)
T 2jii_A 123 MGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLH----ENEYVHGNVTAENIFVDPED 196 (352)
T ss_dssp CEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCCGGGEEEETTE
T ss_pred hhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCHHHEEEcCCC
Confidence 677766 67889999999 99999999743 1357999999999999999999999 57999999999999999998
Q ss_pred --CeEEeeccCccccCCC----------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhH
Q 006903 486 --EPCISEYGLIVTENHD----------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLAT 553 (626)
Q Consensus 486 --~~kl~DFGl~~~~~~~----------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~ 553 (626)
.+||+|||+++..... .....++..|++||......++.++|||||||++|||+||+.||........
T Consensus 197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 276 (352)
T 2jii_A 197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE 276 (352)
T ss_dssp EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHH
Confidence 8999999998653221 1223678899999999888889999999999999999999999975432222
Q ss_pred HHHHHhh--cccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcccc
Q 006903 554 WVHSVVR--EEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEER 619 (626)
Q Consensus 554 ~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 619 (626)
.+..... ........+..... ......+.+++.+||+.||++|||++++++.|+++......
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 277 DIMKQKQKFVDKPGPFVGPCGHW----IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp HHHHHHHHHHHSCCCEECTTSCE----ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhccCChhhhhhhcccc----CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 2111111 00011111100000 01124588899999999999999999999999998766543
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=321.45 Aligned_cols=253 Identities=20% Similarity=0.299 Sum_probs=200.7
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC-------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI-------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... +++.||+|.++.... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 89 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence 478999999999999965 689999999865431 357899999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC----CeEEeeccCcccc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM----EPCISEYGLIVTE 498 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGl~~~~ 498 (626)
+++++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||++...
T Consensus 90 ~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 90 VSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLH----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp CCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 999999999963 346899999999999999999999 57999999999999999877 7999999998654
Q ss_pred CCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 499 NHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 499 ~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
... .....++..|++||......++.++||||||+++|||+||+.||..... .+........... .+....
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~---~~~~~~--- 235 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-QETLTNISAVNYD---FDEEYF--- 235 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTTCCC---CCHHHH---
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-HHHHHHhHhcccC---Ccchhc---
Confidence 322 2234578889999998888889999999999999999999999975432 2222222221111 111111
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhhcccc
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIKEEEER 619 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~~~~~~ 619 (626)
......+.+++.+||+.||++|||+.|+++ .++.++....+
T Consensus 236 --~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~~ 278 (283)
T 3bhy_A 236 --SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVR 278 (283)
T ss_dssp --TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCCC-
T ss_pred --ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHhhh
Confidence 112235788999999999999999999997 56776655443
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=327.14 Aligned_cols=251 Identities=17% Similarity=0.218 Sum_probs=191.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC------CCHHHHHHHHHHhccCC---CCCccccceEEEeCC-----e
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS------ISSEDFKNRMQKIDHVK---HPNVLPPLAYYCSKQ-----E 415 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~------~~~~~~~~ei~~l~~l~---H~nIv~l~g~~~~~~-----~ 415 (626)
.+.||+|+||.||+|+. .+++.||||+++... .....+.+|++++++++ ||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 47899999999999994 678999999986432 12356778888777664 999999999998755 4
Q ss_pred EEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 416 KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
.++||||+. |+|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLH----ANCIVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred EEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 799999997 59999997532 345999999999999999999999 578999999999999999999999999998
Q ss_pred cccCC--CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-------ccccc
Q 006903 496 VTENH--DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-------EWTVE 566 (626)
Q Consensus 496 ~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-------~~~~~ 566 (626)
+.... ......++..|++||......++.++|||||||++|||+||+.||...... +....+... .+...
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 168 RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp TTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSCSS
T ss_pred cccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhccch
Confidence 75432 223456788999999998888999999999999999999999999754332 222222111 00000
Q ss_pred cc--cHHHH------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 VF--DEVLI------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 ~~--d~~~~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. ..... .....++....+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 00000 00011122345788999999999999999999976
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=335.14 Aligned_cols=253 Identities=18% Similarity=0.257 Sum_probs=191.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCC------eEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ------EKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~------~~~lv~ 420 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++||||+++++++.... ..|+||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 47899999999999995 57999999999664433 356889999999999999999999987653 459999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+ +++|.+++.. ..+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 110 e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 110 PFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIH----AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp ECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 999 7899999964 35899999999999999999999 57999999999999999999999999999987655
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-cccc-cc----cH---
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-WTVE-VF----DE--- 570 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~-~~----d~--- 570 (626)
......++..|++||.... ..++.++||||+||++|||++|+.||...... +.+..+.... .... .. ..
T Consensus 181 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 181 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 5555677889999998765 67899999999999999999999999754332 2222222110 0000 00 00
Q ss_pred H-HH---------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhh
Q 006903 571 V-LI---------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNI 613 (626)
Q Consensus 571 ~-~~---------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i 613 (626)
. +. ...........+.+++.+||+.||++|||++|+++ .++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 0 00 00001122345889999999999999999999987 34444
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=323.80 Aligned_cols=243 Identities=22% Similarity=0.308 Sum_probs=190.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 106 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGE 106 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCB
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCc
Confidence 57899999999999985 568999999987543 345789999999999999999999999999999999999999999
Q ss_pred hhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCC--C
Q 006903 428 LFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENH--D 501 (626)
Q Consensus 428 L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~--~ 501 (626)
|.+++... .....+++..+..++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||++..... .
T Consensus 107 L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (285)
T 3is5_A 107 LLERIVSAQARGKALSEGYVAELMKQMMNALAYFH----SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH 182 (285)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred HHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH----hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc
Confidence 99988532 12356899999999999999999999 5799999999999999 4567899999999865332 2
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....++..|++||... ..++.++|||||||++|||++|+.||... +..+............... ... .
T Consensus 183 ~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~-----~~~----~ 251 (285)
T 3is5_A 183 STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT-SLEEVQQKATYKEPNYAVE-----CRP----L 251 (285)
T ss_dssp ----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCC-------CC----C
T ss_pred CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC-CHHHHHhhhccCCcccccc-----cCc----C
Confidence 23456788899999875 45789999999999999999999999743 2222222222111111000 000 1
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 252 TPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 234778999999999999999999975
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-39 Score=325.18 Aligned_cols=247 Identities=19% Similarity=0.260 Sum_probs=195.4
Q ss_pred ccccccCCCcceEEEEeCC----CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLDD----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|...+ +..||+|.+..... ..+.+.+|++++++++||||+++++++.. +..++||||++
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 95 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYP 95 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCC
Confidence 4789999999999998532 34699999976532 34678999999999999999999998764 55789999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-- 502 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-- 502 (626)
+|+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 169 (281)
T 3cc6_A 96 YGELGHYLER--NKNSLKVLTLVLYSLQICKAMAYLE----SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169 (281)
T ss_dssp TCBHHHHHHH--HTTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred CCCHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCccceEEECCCCcEEeCccCCCccccccccc
Confidence 9999999964 2346899999999999999999999 5799999999999999999999999999987543321
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
....++..|++||......++.++||||||+++|||+| |+.||...... +........... . .+.
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-~~~~~~~~~~~~-~----------~~~ 237 (281)
T 3cc6_A 170 KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-DVIGVLEKGDRL-P----------KPD 237 (281)
T ss_dssp ---CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-GHHHHHHHTCCC-C----------CCT
T ss_pred ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-HHHHHHhcCCCC-C----------CCC
Confidence 22345667999999888888999999999999999998 99998643222 222222211111 0 011
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.....+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 238 LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 1223588899999999999999999999999998654
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=340.31 Aligned_cols=242 Identities=17% Similarity=0.272 Sum_probs=185.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHh-ccCCCCCccccceEEEe----CCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKI-DHVKHPNVLPPLAYYCS----KQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l-~~l~H~nIv~l~g~~~~----~~~~~lv~Ey~~ 424 (626)
.++||+|+||.||+|.. .+++.||||+++. ...+.+|++++ +..+||||+++++++.. .+..|+||||++
T Consensus 67 ~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred cceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 36899999999999985 4689999999864 35678888887 45689999999998875 567899999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCccccCCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENHD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~~~~ 501 (626)
+|+|.+++... ....+++..+..++.||+.||.||| +.+|+||||||+|||++. ++.+||+|||+++.....
T Consensus 143 gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 143 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp SEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999999752 2346999999999999999999999 579999999999999998 788999999998754322
Q ss_pred --ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchh---HHHHHHhhcccccccccHHHHhhh
Q 006903 502 --QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLA---TWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
.....++..|++||+.....++.++|||||||++|||+||+.||....... .....+........ .+
T Consensus 218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~--~~------ 289 (400)
T 1nxk_A 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP--NP------ 289 (400)
T ss_dssp ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC--TT------
T ss_pred CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCC--Cc------
Confidence 234467889999999988889999999999999999999999997432211 11112211111100 00
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
........+.+++.+||+.||++|||+.|+++.
T Consensus 290 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 290 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001123358889999999999999999999874
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-38 Score=321.88 Aligned_cols=240 Identities=21% Similarity=0.298 Sum_probs=194.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEe----CCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCS----KQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~----~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .++..||+|.+...... .+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 46799999999999985 56889999998765433 3568899999999999999999998875 3558999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeC-CCCCeEEeeccCccccC
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFN-NNMEPCISEYGLIVTEN 499 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~-~~~~~kl~DFGl~~~~~ 499 (626)
+++|+|.+++.. ...+++..+..++.+++.||.||| +.+ |+||||||+|||++ .++.+||+|||++....
T Consensus 111 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 111 MTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLH----TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred cCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHH----cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 999999999963 246899999999999999999999 566 99999999999998 78999999999986543
Q ss_pred CC-ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 500 HD-QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 500 ~~-~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
.. .....++..|++||.... .++.++|||||||++|||+||+.||....+............... .. .
T Consensus 184 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~---------~ 252 (290)
T 1t4h_A 184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA-SF---------D 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG-GG---------G
T ss_pred ccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc-cc---------C
Confidence 32 233457889999998764 578999999999999999999999986655555544443322111 11 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111235888999999999999999999976
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=343.94 Aligned_cols=242 Identities=18% Similarity=0.242 Sum_probs=195.4
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+.. +++.||+|++++.. ...+.+.+|+.+++.++|||||++++++.+.+..|+||||+++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 153 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 478999999999999954 68999999986522 2334688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.++++. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 154 g~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH----~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~ 225 (410)
T 3v8s_A 154 GDLVNLMSN----YDVPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 225 (410)
T ss_dssp EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEE
T ss_pred CcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCccc
Confidence 999999963 35899999999999999999999 5799999999999999999999999999987644322
Q ss_pred -cccccccccchhhccccCC----CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 -SFLAQTSSLKINDISNQMC----STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~----~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....+++.|++||+..... ++.++|||||||++|||+||+.||... +..+....+..........+
T Consensus 226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~p~-------- 296 (410)
T 3v8s_A 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPD-------- 296 (410)
T ss_dssp CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCCT--------
T ss_pred ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC-ChhhHHHHHHhccccccCCC--------
Confidence 2456889999999886554 678999999999999999999999754 33333333333211111000
Q ss_pred cHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNE--RPSMNQVAVM 609 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~--RPs~~ev~~~ 609 (626)
.......+.+++.+||+.+|.+ ||+++||++.
T Consensus 297 ~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 297 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0011234788899999999998 9999999874
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=320.88 Aligned_cols=248 Identities=19% Similarity=0.244 Sum_probs=198.5
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|... ++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL 93 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcH
Confidence 478999999999999954 57899999987654 4567899999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCCC--cc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~~--~~ 503 (626)
.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||++...... ..
T Consensus 94 ~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (277)
T 3f3z_A 94 FERVVH---KRVFRESDAARIMKDVLSAVAYCH----KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166 (277)
T ss_dssp HHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC
T ss_pred HHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh
Confidence 999863 346899999999999999999999 5799999999999999 78899999999998654322 23
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...++..|++||..... ++.++||||||+++|||+||+.||..... .+............ .... . .....
T Consensus 167 ~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~---~~~~-~----~~~~~ 236 (277)
T 3f3z_A 167 TKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD-SEVMLKIREGTFTF---PEKD-W----LNVSP 236 (277)
T ss_dssp CCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCCCC---CHHH-H----TTSCH
T ss_pred ccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhCCCCC---Cchh-h----hcCCH
Confidence 34578889999987654 78999999999999999999999975432 23333332222111 0000 0 01234
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhh
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV--MINNIKE 615 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~~ 615 (626)
.+.+++.+||+.||++|||+.|+++ .+++...
T Consensus 237 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 270 (277)
T 3f3z_A 237 QAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270 (277)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence 5788999999999999999999986 4554443
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=323.61 Aligned_cols=243 Identities=20% Similarity=0.242 Sum_probs=192.5
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+||+|+||.||+|.. .+++.||||.+.... ...+.+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 5899999999999994 568999999987654 34577999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCccccCCC---cccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
+++........+++..+..++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||++...... ....
T Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 183 (295)
T 2clq_A 108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH----DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF 183 (295)
T ss_dssp HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCC
T ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHH----hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCccccc
Confidence 99975444456789999999999999999999 579999999999999987 899999999998654321 2334
Q ss_pred ccccccchhhccccC--CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 506 AQTSSLKINDISNQM--CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~--~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
.++..|++||..... .++.++||||||+++|||+||+.||..................... .+.....
T Consensus 184 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 253 (295)
T 2clq_A 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE----------IPESMSA 253 (295)
T ss_dssp CCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCC----------CCTTSCH
T ss_pred CCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccc----------ccccCCH
Confidence 578889999987653 3688999999999999999999998643222211111111110000 1112233
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 254 EAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 5788999999999999999999975
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=326.46 Aligned_cols=251 Identities=17% Similarity=0.222 Sum_probs=190.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCc
Confidence 47899999999999996 45999999998765433 356789999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~ 503 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||++...... ..
T Consensus 88 ~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (311)
T 4agu_A 88 VLHELDRY---QRGVPEHLVKSITWQTLQAVNFCH----KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160 (311)
T ss_dssp HHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred hHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC
Confidence 99998853 346899999999999999999999 579999999999999999999999999998754322 12
Q ss_pred ccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH--HHhhc------------cccc--c
Q 006903 504 FLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH--SVVRE------------EWTV--E 566 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~--~~~~~------------~~~~--~ 566 (626)
...++..|++||.... ..++.++|||||||++|||+||+.||........... ..... .+.. .
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCc
Confidence 3456788999998764 5679999999999999999999999975433222111 11000 0000 0
Q ss_pred cccHHH--HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 VFDEVL--IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 ~~d~~~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..++.. ......+.....+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000 000000122345889999999999999999999986
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=324.93 Aligned_cols=253 Identities=14% Similarity=0.176 Sum_probs=196.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEE-EeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY-CSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~-~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.||||.+.... ..+.+.+|+++++.++|++++..++++ ...+..++||||+ +|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCH
Confidence 47899999999999994 678999999875433 224688999999999999988888776 4567789999999 9999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCCC----
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~~---- 501 (626)
.+++... ...+++..+..++.|++.||.||| +.+|+||||||+|||+ ++++.+||+|||+++.....
T Consensus 92 ~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 165 (296)
T 4hgt_A 92 EDLFNFC--SRKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp HHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCc
Confidence 9999632 346999999999999999999999 5799999999999999 78899999999998653322
Q ss_pred ------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc--hhHHHHHHhhcccccccccHHHH
Q 006903 502 ------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN--LATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
.....++..|++||......++.++|||||||++|||+||+.||..... ............... ..
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~--- 239 (296)
T 4hgt_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST---PI--- 239 (296)
T ss_dssp BCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS---CH---
T ss_pred cCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc---hh---
Confidence 1234678889999999888889999999999999999999999974221 111111111110000 00
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
..........+.+++.+||+.||++|||++++++.|+++..+..
T Consensus 240 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 240 -EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 00001123458899999999999999999999999999876544
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-39 Score=326.61 Aligned_cols=246 Identities=17% Similarity=0.228 Sum_probs=195.4
Q ss_pred cccccCCCcceEEEEe---CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL---DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|.. .+++.||||+++..... .+.+.+|+++++.++||||+++++++ ..+..++||||+++
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 3899999999999963 34789999999765422 46789999999999999999999998 66778999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc--
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS-- 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~-- 503 (626)
|+|.+++.. ...+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 102 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (291)
T 1xbb_A 102 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLE----ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174 (291)
T ss_dssp EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred CCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHH----hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcc
Confidence 999999964 246899999999999999999999 57999999999999999999999999999865433221
Q ss_pred ----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 504 ----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 504 ----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
...++..|++||......++.++||||||+++|||+| |+.||.... ..+....+.... ... .+
T Consensus 175 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~~~~~~~~~~~~-~~~----------~~ 242 (291)
T 1xbb_A 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGE-RMG----------CP 242 (291)
T ss_dssp EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHHHTTC-CCC----------CC
T ss_pred cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCC-CCC----------CC
Confidence 1234567999999877778899999999999999999 999987432 222222222211 111 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
......+.+++.+||+.||++||++.|+++.|+++....
T Consensus 243 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 243 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 122345888999999999999999999999999987654
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=332.93 Aligned_cols=257 Identities=22% Similarity=0.337 Sum_probs=200.1
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhcc--CCCCCccccceEEEeCC----eEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDH--VKHPNVLPPLAYYCSKQ----EKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~--l~H~nIv~l~g~~~~~~----~~~lv~Ey~ 423 (626)
..+.||+|+||.||+|+. +|+.||||++... ..+.+.+|++++.. ++||||+++++++...+ ..++||||+
T Consensus 46 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~ 122 (342)
T 1b6c_B 46 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122 (342)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred EEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence 357899999999999997 5899999998653 34667888888876 79999999999998776 789999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh----ccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE----LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~----~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
++|+|.+++.. ..+++..++.++.|++.||.|||.. +++++|+||||||+|||++.++.+||+|||++....
T Consensus 123 ~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 198 (342)
T 1b6c_B 123 EHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 198 (342)
T ss_dssp TTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceecc
Confidence 99999999963 3589999999999999999999932 114689999999999999999999999999986533
Q ss_pred CCc-------cccccccccchhhccccCC------CCCcchhHHHHHHHHHHHcC----------CCCCCCCc----chh
Q 006903 500 HDQ-------SFLAQTSSLKINDISNQMC------STIKADVYGFGVILLELLTG----------KLVQNNGF----NLA 552 (626)
Q Consensus 500 ~~~-------~~~~~~~~~~~pe~~~~~~------~~~k~DVwSfGvvl~elltg----------~~p~~~~~----~~~ 552 (626)
... ....++..|++||...... ++.++|||||||++|||+|| +.||.... ...
T Consensus 199 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 278 (342)
T 1b6c_B 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 278 (342)
T ss_dssp TTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred ccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHH
Confidence 221 2345788899999876542 23689999999999999999 66775321 222
Q ss_pred HHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 553 TWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 553 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
.+............. . ......+....+.+++.+||+.||++|||+.||++.|+++.++..
T Consensus 279 ~~~~~~~~~~~~~~~-~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 279 EMRKVVCEQKLRPNI-P----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp HHHHHHTTSCCCCCC-C----GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCC-c----ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 232222222111111 1 111223556679999999999999999999999999999986543
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=322.02 Aligned_cols=239 Identities=21% Similarity=0.342 Sum_probs=176.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCC
Confidence 47899999999999985 579999999986432 2346789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~ 502 (626)
++|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++..... ..
T Consensus 96 ~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 169 (278)
T 3cok_A 96 GEMNRYLKN--RVKPFSENEARHFMHQIITGMLYLH----SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169 (278)
T ss_dssp EEHHHHHHT--CSSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred CcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcc
Confidence 999999974 2357899999999999999999999 57999999999999999999999999999865432 12
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++||||||+++|||+||+.||...... ............ .+....
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~------------~~~~~~ 236 (278)
T 3cok_A 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK-NTLNKVVLADYE------------MPSFLS 236 (278)
T ss_dssp ----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------CCSSCCC------------CCTTSC
T ss_pred eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH-HHHHHHhhcccC------------CccccC
Confidence 2345778899999988888899999999999999999999998743221 111111111100 011122
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 237 IEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 35788999999999999999999976
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=323.36 Aligned_cols=253 Identities=14% Similarity=0.171 Sum_probs=198.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEE-EeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY-CSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~-~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|+. .+++.||||++.... ..+++.+|+++++.++|++++..++++ ...+..++||||+ +++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCH
Confidence 47899999999999995 679999999986543 335789999999999999988877766 4566789999999 8999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCCC----
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~~---- 501 (626)
.+++... ...+++..+..++.|++.||+||| +++|+||||||+|||+ ++++.+||+|||++......
T Consensus 92 ~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (296)
T 3uzp_A 92 EDLFNFC--SRKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp HHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccc
Confidence 9999632 346999999999999999999999 5799999999999999 48889999999998653322
Q ss_pred ------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc--chhHHHHHHhhcccccccccHHHH
Q 006903 502 ------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF--NLATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
.....++..|++||......++.++|||||||++|||+||+.||.... ...+............ ..+
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~--- 240 (296)
T 3uzp_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST--PIE--- 240 (296)
T ss_dssp BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS--CHH---
T ss_pred ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC--chH---
Confidence 133467888999999988888999999999999999999999987421 1111111111110000 000
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
.........+.+++.+||+.||++|||+.++++.|+++..+..
T Consensus 241 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 241 --VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp --HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 0011123458899999999999999999999999999876544
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-39 Score=333.49 Aligned_cols=233 Identities=14% Similarity=0.183 Sum_probs=192.0
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||.||+|. ..+++.||||+++.... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 4789999999999998 46789999999976542 2235788999999999999999999999999999999
Q ss_pred eecCCC-ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 421 EYQPNG-SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 421 Ey~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
||+.+| +|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++....
T Consensus 109 e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 181 (335)
T 3dls_A 109 EKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLR----LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE 181 (335)
T ss_dssp ECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeEEeccCHHHEEEcCCCcEEEeecccceECC
Confidence 999877 99999963 346999999999999999999999 5799999999999999999999999999987643
Q ss_pred CCc--cccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 500 HDQ--SFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 500 ~~~--~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
... ....++..|++||......+ +.++|||||||++|||++|+.||....... .....
T Consensus 182 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~~~~~------------ 242 (335)
T 3dls_A 182 RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV-------EAAIH------------ 242 (335)
T ss_dssp TTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-------TTCCC------------
T ss_pred CCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-------hhccC------------
Confidence 322 33457889999998876665 789999999999999999999996421110 00000
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+......+.+++.+||+.||++|||++|+++.
T Consensus 243 ~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 243 PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000112347889999999999999999999884
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=328.14 Aligned_cols=250 Identities=18% Similarity=0.252 Sum_probs=196.2
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .+++.||||.+..... ...++.+|+.++++++||||+++++++...+..++||||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMEL 114 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEec
Confidence 47899999999999983 3577999999975432 335788999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCc
Q 006903 423 QPNGSLFNLLHGSEN----GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLI 495 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~ 495 (626)
+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||||||+|||++. +..+||+|||++
T Consensus 115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH----~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE----ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred CCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh----hCCeecCcCCHhHEEEecCCCcceEEECccccc
Confidence 999999999975321 145899999999999999999999 579999999999999994 456999999997
Q ss_pred cccCC-----CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 496 VTENH-----DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 496 ~~~~~-----~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
..... ......++..|++||......++.++|||||||++|||+| |+.||... ...+....+...... .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~~~~~~~~~~~~~-~--- 265 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-SNQEVLEFVTSGGRM-D--- 265 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHHTTCCC-C---
T ss_pred cccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc-CHHHHHHHHhcCCCC-C---
Confidence 64211 1122345778999999888888999999999999999999 88888643 333333333222111 0
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 266 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 266 -------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 0111233578899999999999999999999999988654
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=338.41 Aligned_cols=249 Identities=19% Similarity=0.275 Sum_probs=182.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCC-CCCccccceEEEeCC--eEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQ--EKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~--~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+.++.++. ||||+++++++..++ ..|+|||||
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 47899999999999984 57999999999754433 346779999999997 999999999997654 689999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--- 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--- 500 (626)
+ |+|.++++. ..+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 94 E-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLH----SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp S-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred C-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 7 699999963 36899999999999999999999 67999999999999999999999999999864321
Q ss_pred ---------------------Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHH
Q 006903 501 ---------------------DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV 558 (626)
Q Consensus 501 ---------------------~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~ 558 (626)
......++..|+|||+... ..++.++|||||||++|||++|+.||........ +..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i 243 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ-LERI 243 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHH
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH
Confidence 1122467889999998765 5789999999999999999999999975443322 2222
Q ss_pred hhcccccc--------------------------------ccc---HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCH
Q 006903 559 VREEWTVE--------------------------------VFD---EVLIAEAASEERMLKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 559 ~~~~~~~~--------------------------------~~d---~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
........ .+. ...............+.+++.+||+.||++|||+
T Consensus 244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~ 323 (388)
T 3oz6_A 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323 (388)
T ss_dssp HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence 21100000 000 0000000000123458899999999999999999
Q ss_pred HHHHHH
Q 006903 604 NQVAVM 609 (626)
Q Consensus 604 ~ev~~~ 609 (626)
+|+++.
T Consensus 324 ~e~l~H 329 (388)
T 3oz6_A 324 NDALKH 329 (388)
T ss_dssp HHHTTS
T ss_pred HHHhCC
Confidence 999875
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=331.96 Aligned_cols=252 Identities=20% Similarity=0.210 Sum_probs=193.3
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCC------CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS------ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~------~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
..+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeC
Confidence 357899999999999985 568899999986431 2346789999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCC-------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHhcc
Q 006903 423 QPNGSLFNLLHGSEN-------------------------------------GQSFDWGSRLRVAACVAKALALIHEELR 465 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~ 465 (626)
+++|+|.+++..... ...+++..+..++.|++.||+|||
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---- 185 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---- 185 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH----
Confidence 999999999852100 112356778889999999999999
Q ss_pred CCCceeccCCCCCeeeCCCC--CeEEeeccCccccCC-------Cccccccccccchhhcccc--CCCCCcchhHHHHHH
Q 006903 466 EDGIAHGNLKSNNILFNNNM--EPCISEYGLIVTENH-------DQSFLAQTSSLKINDISNQ--MCSTIKADVYGFGVI 534 (626)
Q Consensus 466 ~~~ivHrDlkp~NILl~~~~--~~kl~DFGl~~~~~~-------~~~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvv 534 (626)
+.+|+||||||+|||++.++ .+||+|||++..... ......++..|++||.... ..++.++|||||||+
T Consensus 186 ~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 186 NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 57999999999999998776 899999999864321 1123457888999998754 567899999999999
Q ss_pred HHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHh
Q 006903 535 LLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINN 612 (626)
Q Consensus 535 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~ 612 (626)
+|||+||+.||..... .+.............. +. .......+.+++.+||+.||++|||+.|+++ .+++
T Consensus 266 l~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~ 336 (345)
T 3hko_A 266 LHLLLMGAVPFPGVND-ADTISQVLNKKLCFEN--PN------YNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336 (345)
T ss_dssp HHHHHHSSCSSCCSSH-HHHHHHHHHCCCCTTS--GG------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHT
T ss_pred HHHHHHCCCCCCCCCh-HHHHHHHHhcccccCC--cc------cccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhcc
Confidence 9999999999975433 3333333332211110 00 0112235788999999999999999999987 4555
Q ss_pred hh
Q 006903 613 IK 614 (626)
Q Consensus 613 i~ 614 (626)
+.
T Consensus 337 ~~ 338 (345)
T 3hko_A 337 FS 338 (345)
T ss_dssp TS
T ss_pred Ch
Confidence 43
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=325.71 Aligned_cols=250 Identities=15% Similarity=0.208 Sum_probs=193.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+++.||+|++...... .+.+.+|++++++++||||+++++++..++..++||||+++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLING 118 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCC
Confidence 47899999999999995 47899999999764322 25688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 119 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 191 (309)
T 2h34_A 119 VDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAH----AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ 191 (309)
T ss_dssp EEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccccc
Confidence 999999963 246899999999999999999999 5799999999999999999999999999986543221
Q ss_pred -cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 -SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||......++.++||||||+++|||+||+.||..... . ............ .. ......
T Consensus 192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~-~~~~~~~~~~~~----~~----~~~~~~ 261 (309)
T 2h34_A 192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-S-VMGAHINQAIPR----PS----TVRPGI 261 (309)
T ss_dssp -----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-H-HHHHHHHSCCCC----GG----GTSTTC
T ss_pred ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-H-HHHHHhccCCCC----cc----ccCCCC
Confidence 234567889999998888889999999999999999999999975322 1 222222211110 00 011122
Q ss_pred HHHHHHHHhhccCCCCCCCC-CHHHHHHHHHhhhhcc
Q 006903 582 MLKLLQVALRCINQSPNERP-SMNQVAVMINNIKEEE 617 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RP-s~~ev~~~L~~i~~~~ 617 (626)
...+.+++.+||+.||++|| +++++++.|+++....
T Consensus 262 ~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 262 PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 33578899999999999999 9999999999876543
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=343.21 Aligned_cols=193 Identities=19% Similarity=0.284 Sum_probs=167.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC------CCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV------KHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l------~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+++.||||+++......+.+.+|+++++.+ +|+||+++++++...+..++||||+
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 47899999999999985 4689999999986544456777888887766 6789999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC--eEEeeccCccccCCC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME--PCISEYGLIVTENHD 501 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGl~~~~~~~ 501 (626)
. |+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||++......
T Consensus 182 ~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~ 255 (429)
T 3kvw_A 182 S-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALH----KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255 (429)
T ss_dssp C-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH----HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC
T ss_pred C-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEEccCCCcceEEeecccceecCCc
Confidence 6 6999998753 2346899999999999999999999 568999999999999999887 999999999776655
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF 549 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~ 549 (626)
.....++..|++||......++.++|||||||++|||+||+.||....
T Consensus 256 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 256 VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 555678889999999988889999999999999999999999987543
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-39 Score=332.37 Aligned_cols=258 Identities=22% Similarity=0.324 Sum_probs=197.9
Q ss_pred cccccccCCCcceEEEEe-----CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCC--eEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL-----DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ--EKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~--~~~lv~E 421 (626)
..+.||+|+||.||+|++ .+++.||||++..... ..+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 357899999999999984 3689999999976543 3357899999999999999999999887654 6899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 125 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 125 YLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG----TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp CCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred CCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH----hCCEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 99999999999743 346899999999999999999999 579999999999999999999999999998764332
Q ss_pred c------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccc----cHH
Q 006903 502 Q------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF----DEV 571 (626)
Q Consensus 502 ~------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----d~~ 571 (626)
. ....++..|++||......++.++|||||||++|||+||+.|+.... .++........ ..... ...
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~ 275 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP--AEFMRMIGNDK-QGQMIVFHLIEL 275 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH--HHHHHHHCTTC-CTHHHHHHHHHH
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH--HHHHHhhcccc-chhhhHHHHHHH
Confidence 2 12234566999999877778899999999999999999998875321 11111110000 00000 000
Q ss_pred HHh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 572 LIA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 572 ~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+.. ...+......+.+++.+||+.||++|||+.|+++.|++++++
T Consensus 276 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 276 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 000 001122345688999999999999999999999999998764
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=318.64 Aligned_cols=241 Identities=17% Similarity=0.196 Sum_probs=193.8
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||||.+.... ...+.+.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 478999999999999954 78999999986543 234678999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----Cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-----DQ 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-----~~ 502 (626)
|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++..... ..
T Consensus 92 L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 164 (276)
T 2yex_A 92 LFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (276)
T ss_dssp GGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred HHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcc
Confidence 9999953 356899999999999999999999 57999999999999999999999999999864321 12
Q ss_pred cccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 SFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||......+ +.++||||||+++|||+||+.||...................... ....
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 234 (276)
T 2yex_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----------WKKI 234 (276)
T ss_dssp CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTT----------GGGS
T ss_pred cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCc----------hhhc
Confidence 23456788999998876554 678999999999999999999997544322222222211111000 0112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 235 DSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 234778999999999999999999976
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=340.88 Aligned_cols=243 Identities=16% Similarity=0.247 Sum_probs=184.8
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLV 419 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv 419 (626)
..+.||+|+||.||+|.. .+++.||||++..... ....+.+|++++++++||||+++++++. .+..++|
T Consensus 139 ~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEE
T ss_pred EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEE
Confidence 357899999999999985 5689999999865321 1134889999999999999999999875 4568999
Q ss_pred EeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC---CCeEEeeccCcc
Q 006903 420 YEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN---MEPCISEYGLIV 496 (626)
Q Consensus 420 ~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl~~ 496 (626)
|||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.+ +.+||+|||+++
T Consensus 218 ~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 218 LELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLH----ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred EEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence 999999999999853 356999999999999999999999 5799999999999999754 459999999987
Q ss_pred ccCCCc--cccccccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHH
Q 006903 497 TENHDQ--SFLAQTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 497 ~~~~~~--~~~~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
...... ....++..|++||... ...++.++|||||||++|||+||+.||............+...... ..+.
T Consensus 291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~---~~~~ 367 (419)
T 3i6u_A 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN---FIPE 367 (419)
T ss_dssp SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCC---CCHH
T ss_pred ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCC---CCch
Confidence 644322 3456788999999864 3566789999999999999999999997543332222222222111 0011
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. .......+.+++.+||+.||++|||++|+++
T Consensus 368 ~-----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 368 V-----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp H-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred h-----hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0 0112345889999999999999999999987
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=343.71 Aligned_cols=248 Identities=17% Similarity=0.225 Sum_probs=187.6
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||.||+|. ..+++.||||++..... ..+.+.+|+++++.++|||||++++++... ...|+||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 4789999999999998 45689999999976432 235688999999999999999999998654 3579999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++ +|.+.+. ..+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 147 E~~~~-~l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH----~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 147 ELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp ECCSE-EHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred eCCCC-CHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 99976 5777764 23899999999999999999999 57999999999999999999999999999876443
Q ss_pred C--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-ccc-------------
Q 006903 501 D--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-EWT------------- 564 (626)
Q Consensus 501 ~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-~~~------------- 564 (626)
. .....++..|++||+.....++.++|||||||++|||++|+.||.+......+. .+... ...
T Consensus 217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~-~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN-KVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHHHCSCCHHHHTTSCHHHH
T ss_pred CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHhcCCCCHHHHHHcchhhh
Confidence 2 234567899999999988889999999999999999999999997554333222 22110 000
Q ss_pred ---------cccccHHHHh-------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 565 ---------VEVFDEVLIA-------EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 565 ---------~~~~d~~~~~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
....-+.... ..........+.+++.+||+.||++|||++|+++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000 00011224568999999999999999999999873
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-39 Score=342.75 Aligned_cols=243 Identities=17% Similarity=0.210 Sum_probs=193.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+|+.||||++++.. ...+.+.+|.+++..++||||+++++++.+.+..|+||||+++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 47899999999999996 479999999997532 1223588999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++... +..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 146 g~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH----~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~ 219 (412)
T 2vd5_A 146 GDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVH----RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR 219 (412)
T ss_dssp CBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred CcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccc
Confidence 9999999632 346899999999999999999999 5799999999999999999999999999987643322
Q ss_pred -cccccccccchhhccc-------cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 503 -SFLAQTSSLKINDISN-------QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~-------~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
....+++.|++||+.. ...++.++|||||||++|||+||+.||.... ..+....+......... +.
T Consensus 220 ~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-~~~~~~~i~~~~~~~~~--p~--- 293 (412)
T 2vd5_A 220 SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS-TAETYGKIVHYKEHLSL--PL--- 293 (412)
T ss_dssp CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHTHHHHCCC--C----
T ss_pred cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC-HHHHHHHHHhcccCcCC--Cc---
Confidence 2346899999999876 3457899999999999999999999997543 33333333321100000 00
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCC---CCHHHHHH
Q 006903 575 EAASEERMLKLLQVALRCINQSPNER---PSMNQVAV 608 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~ev~~ 608 (626)
........+.+++.+||. +|++| |+++|+++
T Consensus 294 --~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 294 --VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred --cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 001123358889999999 99998 68999865
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=345.48 Aligned_cols=242 Identities=12% Similarity=0.145 Sum_probs=186.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHH---HHhccCCCCCccccc-------eEEEeCC-
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRM---QKIDHVKHPNVLPPL-------AYYCSKQ- 414 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei---~~l~~l~H~nIv~l~-------g~~~~~~- 414 (626)
.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+ +.+++++|||||+++ +++..++
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 47899999999999994 679999999997432 2346788999 556667899999998 5555443
Q ss_pred ----------------eEEEEEeecCCCChhHhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccC
Q 006903 415 ----------------EKLLVYEYQPNGSLFNLLHGSE----NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNL 474 (626)
Q Consensus 415 ----------------~~~lv~Ey~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDl 474 (626)
..++||||+ +|+|.+++.... ....+++..++.++.|++.||+||| +.+|+||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrDi 232 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH----HYGLVHTYL 232 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH----HTTEECSCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH----hCCeecCCC
Confidence 278999999 689999996421 1123456888999999999999999 579999999
Q ss_pred CCCCeeeCCCCCeEEeeccCccccCCCccccccccccchhhccccC-----------CCCCcchhHHHHHHHHHHHcCCC
Q 006903 475 KSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQM-----------CSTIKADVYGFGVILLELLTGKL 543 (626)
Q Consensus 475 kp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~-----------~~~~k~DVwSfGvvl~elltg~~ 543 (626)
||+|||++.++.+||+|||+++..........+ ..|++||..... .++.++|||||||++|||+||+.
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~ 311 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADL 311 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCC
Confidence 999999999999999999999865554444556 889999998776 78999999999999999999999
Q ss_pred CCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhh
Q 006903 544 VQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIKE 615 (626)
Q Consensus 544 p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~~ 615 (626)
||........ ...... ........+.+++.+||+.||++|||+.|+++ .++++..
T Consensus 312 Pf~~~~~~~~----------~~~~~~-------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~ 368 (377)
T 3byv_A 312 PITKDAALGG----------SEWIFR-------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT 368 (377)
T ss_dssp CC------CC----------SGGGGS-------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred CCcccccccc----------hhhhhh-------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHH
Confidence 9864221100 000000 00111235788999999999999999999986 5555544
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=327.27 Aligned_cols=247 Identities=19% Similarity=0.235 Sum_probs=195.4
Q ss_pred ccccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeec
Q 006903 349 APAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
...+.||+|+||.||+|.. .+++.||+|+++... .....+.+|+.++..++ ||||+++++++...+..++||||+
T Consensus 32 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~ 111 (327)
T 3lm5_A 32 LTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYA 111 (327)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEec
Confidence 3457899999999999985 469999999987543 23568899999999985 699999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCccccCC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENH 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~~~ 500 (626)
++|+|.+++... ....+++..+..++.|++.||+||| +.||+||||||+|||++. ++.+||+|||+++....
T Consensus 112 ~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH----~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 112 AGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLH----QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp TTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred CCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHH----HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 999999998642 2357999999999999999999999 579999999999999998 78999999999876433
Q ss_pred C--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 501 D--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 501 ~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
. .....++..|++||......++.++|||||||++|||+||+.||...... +....+....... ..+ ..
T Consensus 187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~--~~~------~~ 257 (327)
T 3lm5_A 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ-ETYLNISQVNVDY--SEE------TF 257 (327)
T ss_dssp -------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCC--CTT------TT
T ss_pred ccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-HHHHHHHhccccc--Cch------hh
Confidence 2 23346788999999998888899999999999999999999999754332 2222222211100 000 01
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
......+.+++.+||+.||++|||++|+++.
T Consensus 258 ~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 258 SSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred cccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1123357889999999999999999999763
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-38 Score=319.14 Aligned_cols=242 Identities=19% Similarity=0.270 Sum_probs=195.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+++.||+|++....... +.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence 47899999999999985 468999999997654333 56789999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC---eEEeeccCccccCCCc-
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME---PCISEYGLIVTENHDQ- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl~~~~~~~~- 502 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++. +||+|||++.......
T Consensus 91 ~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (284)
T 3kk8_A 91 ELFEDIVA---REFYSEADASHCIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163 (284)
T ss_dssp BHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB
T ss_pred CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc
Confidence 99998863 246899999999999999999999 579999999999999986655 9999999986543322
Q ss_pred -cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 -SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||......++.++||||||+++|||++|+.||..... ................ + .....
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~--~------~~~~~ 234 (284)
T 3kk8_A 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKAGAYDYPS--P------EWDTV 234 (284)
T ss_dssp CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCCCCCT--T------TTTTS
T ss_pred ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch-hHHHHHHHhccccCCc--h------hhccc
Confidence 234678889999998888889999999999999999999999975432 2333333222211110 0 00112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 235 TPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 234788999999999999999999987
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=328.65 Aligned_cols=251 Identities=16% Similarity=0.221 Sum_probs=191.8
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|... +|+.||||++...... .+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 109 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence 478999999999999954 5899999998665433 245789999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~ 503 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... ..
T Consensus 110 ~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (331)
T 4aaa_A 110 ILDDLELF---PNGLDYQVVQKYLFQIINGIGFCH----SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182 (331)
T ss_dssp HHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred hHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHH----HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccC
Confidence 99988753 346899999999999999999999 579999999999999999999999999998653321 22
Q ss_pred ccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc-----------------
Q 006903 504 FLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV----------------- 565 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~----------------- 565 (626)
...++..|++||..... .++.++|||||||++|||+||+.||....................
T Consensus 183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (331)
T 4aaa_A 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262 (331)
T ss_dssp -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCC
T ss_pred CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccccc
Confidence 34578889999987654 678999999999999999999999976544332222111100000
Q ss_pred -ccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 566 -EVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 566 -~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.............+.....+.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000001122446889999999999999999999976
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=328.65 Aligned_cols=253 Identities=21% Similarity=0.312 Sum_probs=194.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEe----CCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCS----KQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~----~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||++.. .+++.||||++.... ...+.+.+|+++++.++||||+++++++.. ....++||||++
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~ 113 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCC
Confidence 47899999999999995 679999999986543 334678999999999999999999999873 347899999999
Q ss_pred CCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 425 NGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 425 ~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
+|+|.+++... .....+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 114 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 189 (317)
T 2buj_A 114 RGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH----AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189 (317)
T ss_dssp TCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEE
T ss_pred CCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccc
Confidence 99999998642 12457999999999999999999999 5799999999999999999999999999876432111
Q ss_pred -----------cccccccccchhhccccCC---CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 503 -----------SFLAQTSSLKINDISNQMC---STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 503 -----------~~~~~~~~~~~pe~~~~~~---~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
....++..|++||...... ++.++|||||||++|||++|+.||.....................
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-- 267 (317)
T 2buj_A 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIP-- 267 (317)
T ss_dssp SHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CC--
T ss_pred cccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCC--
Confidence 1123477899999876443 588999999999999999999998521100000111111110000
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
........+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 268 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 268 --------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp --------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred --------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 01112345888999999999999999999999999987543
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=330.12 Aligned_cols=249 Identities=14% Similarity=0.143 Sum_probs=185.2
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|. ..+++.||||+++..... .+.+.+|++++++++||||+++++++...+..++||||++ |
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-N 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-C
Confidence 4789999999999998 457999999999755422 3467899999999999999999999999999999999998 5
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee-----CCCCCeEEeeccCccccCC-
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF-----NNNMEPCISEYGLIVTENH- 500 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl-----~~~~~~kl~DFGl~~~~~~- 500 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++.+||+|||+++....
T Consensus 118 ~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~ 190 (329)
T 3gbz_A 118 DLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCH----SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190 (329)
T ss_dssp EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred CHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence 99999964 246899999999999999999999 5799999999999999 4555699999999865432
Q ss_pred --CccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccc-----------
Q 006903 501 --DQSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVE----------- 566 (626)
Q Consensus 501 --~~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------- 566 (626)
......++..|++||..... .++.++|||||||++|||++|+.||.....................
T Consensus 191 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (329)
T 3gbz_A 191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPD 270 (329)
T ss_dssp ---------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhh
Confidence 12234568889999987653 4799999999999999999999999765443322221111000000
Q ss_pred -------cccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 -------VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 -------~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+. ..........+.+++.+||+.||++|||++|+++
T Consensus 271 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 271 WKQSFPKFRGKTLK-RVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CCTTCCCCCCCCHH-HHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhccccHh-hhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000000 0000112245789999999999999999999976
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-38 Score=326.33 Aligned_cols=246 Identities=15% Similarity=0.218 Sum_probs=192.8
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CCCccccceEEEe--CCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNVLPPLAYYCS--KQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~--~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|. ..+++.||||+++. ...+.+.+|++++++++ ||||+++++++.. ....++||||++++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECS--CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEecc--cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 4789999999999998 46789999999874 34678999999999997 9999999999987 56789999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCccccCC--Ccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTENH--DQS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~~~--~~~ 503 (626)
+|.+++. .+++..+..++.|++.||.||| +.+|+||||||+|||++.++ .+||+|||+++.... ...
T Consensus 119 ~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~ 188 (330)
T 3nsz_A 119 DFKQLYQ------TLTDYDIRFYMYEILKALDYCH----SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 188 (330)
T ss_dssp CHHHHGG------GCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC
T ss_pred hHHHHHH------hCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccc
Confidence 9999984 3789999999999999999999 57999999999999999776 899999999875332 223
Q ss_pred ccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccc----------ccHHH
Q 006903 504 FLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEV----------FDEVL 572 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------~d~~~ 572 (626)
...++..|++||.... ..++.++|||||||++|||+||+.||..+.+..+.+............ .++..
T Consensus 189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (330)
T 3nsz_A 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 268 (330)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHH
T ss_pred cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccch
Confidence 3457788999998765 568999999999999999999999997655443333222111000000 00000
Q ss_pred ---------------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 ---------------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ---------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
............+.+++.+||+.||++|||++|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 269 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000112346889999999999999999999987
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=346.29 Aligned_cols=242 Identities=17% Similarity=0.211 Sum_probs=196.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.++||+|+||.||+|+. .+|+.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..|+||||+++
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 36799999999999996 469999999996532 3346788999999999999999999999999999999999999
Q ss_pred CChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--
Q 006903 426 GSLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-- 502 (626)
Q Consensus 426 g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-- 502 (626)
|+|.+++.... ....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 270 g~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH----~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH----QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp CBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH----HcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 99999996432 2347999999999999999999999 5799999999999999999999999999987543322
Q ss_pred -cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc---chhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 -SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF---NLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....+++.|++||+.....++.++|||||||++|||+||+.||.... ...+....+...... .+
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~------------~p 413 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT------------YP 413 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC------------CC
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccC------------CC
Confidence 23478999999999988889999999999999999999999997532 223333333322111 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPSM-----NQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~-----~ev~~ 608 (626)
......+.+++.+||+.||++||++ +++++
T Consensus 414 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 414 DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1123357889999999999999975 56653
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-38 Score=320.97 Aligned_cols=239 Identities=16% Similarity=0.257 Sum_probs=195.7
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++... +++.||+|.+..... ..+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 99 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 99 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCC
Confidence 478999999999999964 588999999865432 235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~ 502 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++..... ..
T Consensus 100 ~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (294)
T 2rku_A 100 RSLLELHKR---RKALTEPEARYYLRQIVLGCQYLH----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 172 (294)
T ss_dssp CBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEcCCCCEEEEeccCceecccCcccc
Confidence 999999853 246899999999999999999999 57999999999999999999999999999865432 22
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++||||||+++|||+||+.||..... .+............ +....
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~------------~~~~~ 239 (294)
T 2rku_A 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-KETYLRIKKNEYSI------------PKHIN 239 (294)
T ss_dssp CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTTCCCC------------CTTSC
T ss_pred ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhhccCCC------------ccccC
Confidence 334578889999998888889999999999999999999999975432 22222222221110 01112
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 240 PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 347789999999999999999999873
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=349.14 Aligned_cols=241 Identities=22% Similarity=0.206 Sum_probs=196.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.++||+|+||.||+|+. .+|+.||||++.... .....+.+|++++++++|||||++++++.+.+..++||||+++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 47899999999999995 479999999986532 3456788999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--c
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--S 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~ 503 (626)
|+|.+++... ....+++..+..++.||+.||.||| +.+||||||||+|||++.++.+||+|||+++...... .
T Consensus 269 g~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH----~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~ 343 (576)
T 2acx_A 269 GDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLH----RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 343 (576)
T ss_dssp CBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEE
T ss_pred CcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeccCCchheEEEeCCCCeEEEecccceecccCcccc
Confidence 9999999743 2345999999999999999999999 5799999999999999999999999999987643322 3
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc---hhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN---LATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
...+++.|++||+.....++.++|||||||++|||++|+.||..... .......+..... . .+..
T Consensus 344 ~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~--~----------~p~~ 411 (576)
T 2acx_A 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE--E----------YSER 411 (576)
T ss_dssp CCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC--C----------CCTT
T ss_pred ccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccc--c----------CCcc
Confidence 34688999999998887889999999999999999999999975422 1222222221110 0 1111
Q ss_pred HHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
....+.+++.+||+.||++|| +++|+++
T Consensus 412 ~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 223578899999999999999 7788865
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=336.25 Aligned_cols=243 Identities=14% Similarity=0.188 Sum_probs=193.7
Q ss_pred ccccccCCCcceEEEE------eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC---CCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVV------LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK---HPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~---H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||+|. ..+++.||||+++.. ...++.+|++++++++ |+||+++++++...+..++|||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 4789999999999994 456899999999753 4667888888888877 9999999999999999999999
Q ss_pred ecCCCChhHhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-----------CCCeE
Q 006903 422 YQPNGSLFNLLHGSE--NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-----------NMEPC 488 (626)
Q Consensus 422 y~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-----------~~~~k 488 (626)
|+++|+|.+++...+ ....+++..++.++.|++.||+||| +.+||||||||+|||++. ++.+|
T Consensus 148 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH----~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~k 223 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH----DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLA 223 (365)
T ss_dssp CCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECGGGTCC------CTTEE
T ss_pred ccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh----hCCeecCCCCHHHEEecccccCccccccccCCEE
Confidence 999999999996321 3457999999999999999999999 689999999999999998 89999
Q ss_pred EeeccCccccC---C--CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc
Q 006903 489 ISEYGLIVTEN---H--DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW 563 (626)
Q Consensus 489 l~DFGl~~~~~---~--~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 563 (626)
|+|||+++... . ......++..|++||......++.++|||||||++|||+||+.||....... + .
T Consensus 224 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~--------~ 294 (365)
T 3e7e_A 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-C--------K 294 (365)
T ss_dssp ECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-E--------E
T ss_pred EeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-e--------e
Confidence 99999986422 1 1233457899999999988889999999999999999999999986322110 0 0
Q ss_pred ccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCC-CCHHHHHHHHHhhhhc
Q 006903 564 TVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNER-PSMNQVAVMINNIKEE 616 (626)
Q Consensus 564 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~ev~~~L~~i~~~ 616 (626)
....+.. . .. ...+.+++..|++.+|.+| |+++++.+.|+++...
T Consensus 295 ~~~~~~~----~-~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 295 PEGLFRR----L-PH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ECSCCTT----C-SS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred echhccc----c-Cc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 0000000 0 11 2235567789999999998 6888888888887554
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=329.04 Aligned_cols=256 Identities=18% Similarity=0.196 Sum_probs=190.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||||+++..... ...+.+|++++++++||||+++++++...+..++||||++ |+
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 85 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EE
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cC
Confidence 478999999999999954 7899999999754322 2245689999999999999999999999999999999997 59
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~ 504 (626)
|.+++... ...+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||++...... ...
T Consensus 86 l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 159 (324)
T 3mtl_A 86 LKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCH----RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN 159 (324)
T ss_dssp HHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccc
Confidence 99988642 356899999999999999999999 579999999999999999999999999998654322 123
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc--cccccccH-----HHHh--
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE--WTVEVFDE-----VLIA-- 574 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~~~d~-----~~~~-- 574 (626)
..++..|++||.... ..++.++|||||||++|||+||+.||..... .+....+.... ...+.+.. ....
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (324)
T 3mtl_A 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV-EEQLHFIFRILGTPTEETWPGILSNEEFKTYN 238 (324)
T ss_dssp ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTC
T ss_pred ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChHhchhhhcchhhcccc
Confidence 356888999998765 5679999999999999999999999975432 22222221100 00000000 0000
Q ss_pred ---------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 575 ---------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 575 ---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
....+.....+.+++.+||+.||++|||++|+++ .+.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 289 (324)
T 3mtl_A 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG 289 (324)
T ss_dssp CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence 0000112345789999999999999999999987 444443
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=331.31 Aligned_cols=240 Identities=18% Similarity=0.246 Sum_probs=190.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+|+.||||++..... ...+|++++.++ +||||+++++++.+.+..|+||||+++|+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 103 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcH
Confidence 47899999999999985 4689999999976432 345688888777 799999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC----CCeEEeeccCccccCCC---
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN----MEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGl~~~~~~~--- 501 (626)
.+++.. ...+++..+..++.|++.||.||| +.||+||||||+|||+.++ +.+||+|||+++.....
T Consensus 104 ~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH----~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 176 (342)
T 2qr7_A 104 LDKILR---QKFFSEREASAVLFTITKTVEYLH----AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176 (342)
T ss_dssp HHHHHT---CTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC
T ss_pred HHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc
Confidence 999963 346899999999999999999999 5799999999999998543 34999999998754322
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCC--cchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNG--FNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
.....++..|++||......++.++|||||||++|||++|+.||... ....+....+........ .. ...
T Consensus 177 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~--~~------~~~ 248 (342)
T 2qr7_A 177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLS--GG------YWN 248 (342)
T ss_dssp BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCC--ST------TTT
T ss_pred eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccC--cc------ccc
Confidence 22345688999999987777788999999999999999999999743 233334444333322110 00 001
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 249 SVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 12335788999999999999999999986
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-38 Score=321.40 Aligned_cols=240 Identities=18% Similarity=0.287 Sum_probs=196.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .+++.||||.+.... ...+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 106 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCc
Confidence 47899999999999984 568999999987543 345789999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~ 504 (626)
|.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... ...
T Consensus 107 L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 107 ALDLLEP----GPLDETQIATILREILKGLDYLH----SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp HHHHHTT----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 9999953 46899999999999999999999 579999999999999999999999999998654322 233
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++||||||+++|||++|+.||..... ........... ... ........
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~-~~~----------~~~~~~~~ 246 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP-MKVLFLIPKNN-PPT----------LEGNYSKP 246 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHSC-CCC----------CCSSCCHH
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH-HHHHHHhhcCC-CCC----------CccccCHH
Confidence 4578889999998888889999999999999999999999874332 22222221111 100 01112234
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
+.+++.+||+.||++|||+.|+++..
T Consensus 247 l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 247 LKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred HHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 78899999999999999999998753
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-38 Score=331.74 Aligned_cols=249 Identities=20% Similarity=0.242 Sum_probs=175.8
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||.||+|. ..+|+.||||++...... .+.+.+|+++++.++||||+++++++... ...++||
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 4789999999999998 457999999999764432 35688999999999999999999998754 5579999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+ +++|.+++.. ..+++..+..++.|+++||.||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 114 e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 114 HLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp ECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred ccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 999 6899998853 46899999999999999999999 57999999999999999999999999999976555
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc------cccccHHHH
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT------VEVFDEVLI 573 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~------~~~~d~~~~ 573 (626)
......++..|++||.... ..++.++|||||||++|||+||+.||...... +.+..+...... ..+......
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 4455677889999998765 67899999999999999999999999754332 222222111000 000000000
Q ss_pred ----h---------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 574 ----A---------EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 574 ----~---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
. ..........+.+++.+||+.||++|||+.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 00000112457899999999999999999999873
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-38 Score=328.46 Aligned_cols=238 Identities=16% Similarity=0.272 Sum_probs=195.6
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++... +++.||+|.+..... ..+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 125 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 125 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCC
Confidence 478999999999999954 588999999875432 235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~ 502 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++..... ..
T Consensus 126 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 198 (335)
T 2owb_A 126 RSLLELHKR---RKALTEPEARYYLRQIVLGCQYLH----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 198 (335)
T ss_dssp CBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccc
Confidence 999999853 246899999999999999999999 57999999999999999999999999999865432 22
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||+||+.||.... ..+............ +....
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~------------~~~~~ 265 (335)
T 2owb_A 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-LKETYLRIKKNEYSI------------PKHIN 265 (335)
T ss_dssp CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHHTCCCC------------CTTSC
T ss_pred cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC-HHHHHHHHhcCCCCC------------CccCC
Confidence 33457888999999888888999999999999999999999997543 222222222221110 01112
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||++|+++
T Consensus 266 ~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 266 PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 34778999999999999999999987
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=324.96 Aligned_cols=251 Identities=18% Similarity=0.297 Sum_probs=178.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .+++.||||++.... ...+++.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 99 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCB
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCc
Confidence 47899999999999984 578999999987543 234678899999999999999999999999999999999999999
Q ss_pred hhHhhcC-----CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 428 LFNLLHG-----SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 428 L~~~l~~-----~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
|.+++.. ......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 100 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 100 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH----KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp HHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred hHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH----hCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 9999853 112356899999999999999999999 579999999999999999999999999997543221
Q ss_pred -------ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHH
Q 006903 502 -------QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 -------~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
.....++..|++||.... ..++.++|||||||++|||+||+.||................... ... ...
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~-~~~ 252 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS--LET-GVQ 252 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCC--TTC----
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCc--ccc-ccc
Confidence 123457788999998754 457899999999999999999999997544333222221111100 000 000
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...........+.+++.+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 253 DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp --CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00011112335788999999999999999999987
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=323.97 Aligned_cols=238 Identities=18% Similarity=0.255 Sum_probs=189.7
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC---CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI---SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +++.||||+++.... ...++.+|+..+..+ +||||+++++++.+++..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 478999999999999964 799999999976432 335688999999998 999999999999999999999999999
Q ss_pred CChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-------------------CC
Q 006903 426 GSLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-------------------NM 485 (626)
Q Consensus 426 g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-------------------~~ 485 (626)
|+|.+++.... ....+++..+..++.|++.||.||| +++|+||||||+|||++. ..
T Consensus 96 ~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 96 GSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH----SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEC--------------------CC
T ss_pred CcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH----hCCEeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 99999996421 1246899999999999999999999 579999999999999984 44
Q ss_pred CeEEeeccCccccCCCccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc
Q 006903 486 EPCISEYGLIVTENHDQSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT 564 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 564 (626)
.+||+|||++....... ...++..|++||..... .++.++|||||||++|||++|.+++....... ...... .
T Consensus 172 ~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~----~~~~~~-~ 245 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH----EIRQGR-L 245 (289)
T ss_dssp CEEECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH----HHHTTC-C
T ss_pred EEEEcccccccccCCcc-ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH----HHHcCC-C
Confidence 78999999987654433 23578889999987654 55679999999999999999998765432211 111111 1
Q ss_pred cccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 565 VEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 565 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. .+......+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 246 PR----------IPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp CC----------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC----------CCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11 01112235788999999999999999999976
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=317.13 Aligned_cols=238 Identities=20% Similarity=0.304 Sum_probs=196.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +++.||||.+.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 98 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence 478999999999999954 68899999986432 3346789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-Cccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-DQSF 504 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~~~~ 504 (626)
|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++..... ....
T Consensus 99 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (284)
T 2vgo_A 99 GELYKELQKH---GRFDEQRSATFMEELADALHYCH----ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRT 171 (284)
T ss_dssp EEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCC
T ss_pred CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEEcCCCCEEEecccccccCccccccc
Confidence 9999999642 46899999999999999999999 68999999999999999999999999999865432 2233
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++||||||+++|||++|+.||..... .+....+...... .+......
T Consensus 172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~------------~~~~~~~~ 238 (284)
T 2vgo_A 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-TETHRRIVNVDLK------------FPPFLSDG 238 (284)
T ss_dssp CCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTTCCC------------CCTTSCHH
T ss_pred ccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-hHHHHHHhccccC------------CCCcCCHH
Confidence 4678889999998888889999999999999999999999975432 2222222222111 01112234
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 239 SKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhhcCHhhCCCHHHHhh
Confidence 788999999999999999999987
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-38 Score=340.59 Aligned_cols=183 Identities=20% Similarity=0.232 Sum_probs=145.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeC-----CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSK-----QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .+++.||||++...... .+.+.+|++++++++|||||++++++... ...|+|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 57899999999999984 47899999999764433 35688999999999999999999998543 56899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+ +|+|.+++.. ...+++..+..++.||+.||.||| +.+||||||||+|||++.++.+||+|||+++.....
T Consensus 138 ~~-~~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH----~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 209 (458)
T 3rp9_A 138 IA-DSDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVH----SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209 (458)
T ss_dssp CC-SEEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred cc-ccchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHH----hCCcCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence 98 4799999963 356999999999999999999999 579999999999999999999999999998754311
Q ss_pred ------------------------------ccccccccccchhhcc-ccCCCCCcchhHHHHHHHHHHHcC
Q 006903 502 ------------------------------QSFLAQTSSLKINDIS-NQMCSTIKADVYGFGVILLELLTG 541 (626)
Q Consensus 502 ------------------------------~~~~~~~~~~~~pe~~-~~~~~~~k~DVwSfGvvl~elltg 541 (626)
.....++..|++||+. ....++.++|||||||++|||+||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 1223568889999975 566789999999999999999993
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=334.10 Aligned_cols=201 Identities=20% Similarity=0.285 Sum_probs=156.5
Q ss_pred cchhhhhcccccccccCCCcceEEEEeC---CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEe--CCe
Q 006903 341 LKFEDLLRAPAELLGRGKHGSLYRVVLD---DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS--KQE 415 (626)
Q Consensus 341 ~~~~~l~~~~~~~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~--~~~ 415 (626)
..+++.....++.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.. ...
T Consensus 16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 3455665556778999999999999965 57899999997643 34578899999999999999999999965 668
Q ss_pred EEEEEeecCCCChhHhhcCC------CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee----CCCC
Q 006903 416 KLLVYEYQPNGSLFNLLHGS------ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF----NNNM 485 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~------~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl----~~~~ 485 (626)
.++||||+. |+|.+++... .....+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECCSSTTTT
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH----hCCEeCCCcCHHHeEEecCCCCCC
Confidence 899999997 5888877421 12235899999999999999999999 5799999999999999 7788
Q ss_pred CeEEeeccCccccCCC------ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCC
Q 006903 486 EPCISEYGLIVTENHD------QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNN 547 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~------~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~ 547 (626)
.+||+|||+++..... .....++..|++||+... ..++.++|||||||++|||+||+.||..
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 9999999998754321 223467889999998766 4589999999999999999999999963
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=335.25 Aligned_cols=252 Identities=17% Similarity=0.208 Sum_probs=194.1
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC--------CCCccccceEEE----eCCeEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK--------HPNVLPPLAYYC----SKQEKL 417 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~--------H~nIv~l~g~~~----~~~~~~ 417 (626)
.+.||+|+||.||+|+ ..+++.||||+++......+.+.+|+++++.++ |+||+++++++. .....+
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 4789999999999998 456899999999765444567889999998885 788999999987 456789
Q ss_pred EEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCC-CceeccCCCCCeeeCCCC-----------
Q 006903 418 LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED-GIAHGNLKSNNILFNNNM----------- 485 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~-~ivHrDlkp~NILl~~~~----------- 485 (626)
+||||+ +|+|.+++... ....+++..+..++.|++.||.||| ++ ||+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH----~~~givHrDikp~NIll~~~~~~~~~~~~~~~ 195 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLH----TKCRIIHTDIKPENILLSVNEQYIRRLAAEAT 195 (397)
T ss_dssp EEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHH----HTTCEECCCCSGGGEEECCCHHHHHHHHHHHC
T ss_pred EEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHH----HhCCEecCCCCHHHeeEeccchhhhhhhhhhH
Confidence 999999 56666666432 2356999999999999999999999 55 899999999999999775
Q ss_pred --------------------------------------CeEEeeccCccccCCCccccccccccchhhccccCCCCCcch
Q 006903 486 --------------------------------------EPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKAD 527 (626)
Q Consensus 486 --------------------------------------~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~D 527 (626)
.+||+|||++...........++..|++||......++.++|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 275 (397)
T 1wak_A 196 EWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPAD 275 (397)
T ss_dssp ---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHH
T ss_pred HHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHH
Confidence 799999999876655555567889999999998888999999
Q ss_pred hHHHHHHHHHHHcCCCCCCCCcc-----hhHHHHHHhh---c---------cccccccc------------------HHH
Q 006903 528 VYGFGVILLELLTGKLVQNNGFN-----LATWVHSVVR---E---------EWTVEVFD------------------EVL 572 (626)
Q Consensus 528 VwSfGvvl~elltg~~p~~~~~~-----~~~~~~~~~~---~---------~~~~~~~d------------------~~~ 572 (626)
||||||++|||+||+.||..... .......... . .+..+.+. ...
T Consensus 276 iwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
T 1wak_A 276 IWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV 355 (397)
T ss_dssp HHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhh
Confidence 99999999999999999963221 0111111100 0 00000000 000
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+....+.+++.+||+.||++|||++|+++
T Consensus 356 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 356 EKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 001123556678999999999999999999999975
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-38 Score=325.44 Aligned_cols=252 Identities=17% Similarity=0.297 Sum_probs=197.4
Q ss_pred ccccccCCCcceEEEEe--CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCC------ccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL--DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPN------VLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~n------Iv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .+++.||||+++......+.+.+|+++++.++|+| ++++++++...+..++||||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 98 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFEL 98 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcC
Confidence 47899999999999985 46899999999765444567889999998887654 99999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-------------------
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN------------------- 483 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~------------------- 483 (626)
+ +++|.+++... ....+++..+..++.|++.||+||| +++|+||||||+|||++.
T Consensus 99 ~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~ 172 (339)
T 1z57_A 99 L-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLH----SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI 172 (339)
T ss_dssp C-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESCCCEEEEEC----CEEEEES
T ss_pred C-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHEEEeccccccccCCcccccccccc
Confidence 9 88999999753 2346899999999999999999999 579999999999999987
Q ss_pred CCCeEEeeccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhH--HHHHHhhc
Q 006903 484 NMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLAT--WVHSVVRE 561 (626)
Q Consensus 484 ~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~--~~~~~~~~ 561 (626)
++.+||+|||++...........++..|++||......++.++|||||||++|||+||+.||........ .+......
T Consensus 173 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 252 (339)
T 1z57_A 173 NPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGP 252 (339)
T ss_dssp CCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCS
T ss_pred CCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 6689999999998765555556788999999999888889999999999999999999999975432211 11111110
Q ss_pred cccccc---------c---------------------cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 562 EWTVEV---------F---------------------DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 562 ~~~~~~---------~---------------------d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..... + .+..............+.+++.+||+.||++|||+.|+++.
T Consensus 253 -~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 253 -LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp -CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -CCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 00000 0 00000001122345678999999999999999999999853
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=342.17 Aligned_cols=241 Identities=22% Similarity=0.283 Sum_probs=197.3
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++++++||||+++++++...+..++||||+.+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 110 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999954 79999999986543 3457899999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCCCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~~~ 502 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||+ +.++.+||+|||++.......
T Consensus 111 ~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 111 GELFDEIIS---RKRFSEVDAARIIRQVLSGITYMH----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 999999964 346899999999999999999999 5799999999999999 567899999999986543322
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
....+++.|++||.... .++.++||||+||++|||++|+.||... +..+....+........... ...
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~--------~~~ 253 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQ--------WKK 253 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCSGG--------GGG
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHcCCCCCCCcc--------ccc
Confidence 33467889999998865 5889999999999999999999999754 33334444433332211110 011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....+.+++.+||+.||++|||+.|+++
T Consensus 254 ~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 254 VSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 2335788999999999999999999986
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-38 Score=321.19 Aligned_cols=242 Identities=21% Similarity=0.299 Sum_probs=195.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|+. .+|+.||+|.++... ...+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccH
Confidence 47899999999999995 479999999997654 3446789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCCC-ccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENHD-QSF 504 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~~-~~~ 504 (626)
.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||++ ++++.+||+|||++...... ...
T Consensus 94 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (304)
T 2jam_A 94 FDRILE---RGVYTEKDASLVIQQVLSAVKYLH----ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMST 166 (304)
T ss_dssp HHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHH
T ss_pred HHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcccc
Confidence 999853 246899999999999999999999 5799999999999999 78899999999998654332 223
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++|||||||++|||++|+.||.... ..+....+........ . .........
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~~~---~-----~~~~~~~~~ 237 (304)
T 2jam_A 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET-ESKLFEKIKEGYYEFE---S-----PFWDDISES 237 (304)
T ss_dssp HHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHCCCCCC---T-----TTTTTSCHH
T ss_pred ccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHcCCCCCC---c-----cccccCCHH
Confidence 457888999999988888999999999999999999999987543 2233333332221110 0 001112345
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 238 AKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHcCCChhHCcCHHHHhc
Confidence 888999999999999999999986
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=321.35 Aligned_cols=241 Identities=17% Similarity=0.291 Sum_probs=192.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|... +|+.||||.+.... ..+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 112 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHH
Confidence 478999999999999864 58999999997643 4567999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~~ 506 (626)
+++.. ....+++..+..++.+++.||.||| +.+|+||||||+||+++.++.+||+|||++...... .....
T Consensus 113 ~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 186 (314)
T 3com_A 113 DIIRL--RNKTLTEDEIATILQSTLKGLEYLH----FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI 186 (314)
T ss_dssp HHHHH--HTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCC
T ss_pred HHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccC
Confidence 99962 2356899999999999999999999 579999999999999999999999999998653322 23345
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
++..|++||......++.++||||||+++|||++|+.||......... ....... ...... .......+.
T Consensus 187 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~-~~~~~~--------~~~~~~~l~ 256 (314)
T 3com_A 187 GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-FMIPTNP-PPTFRK--------PELWSDNFT 256 (314)
T ss_dssp SCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSC-CCCCSS--------GGGSCHHHH
T ss_pred CCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHhcCC-CcccCC--------cccCCHHHH
Confidence 778899999988888899999999999999999999999754332222 1111111 000000 111223578
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 006903 587 QVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+++.+||+.||++|||+.|+++
T Consensus 257 ~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 257 DFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHccCChhhCcCHHHHHh
Confidence 8999999999999999999976
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=325.37 Aligned_cols=251 Identities=18% Similarity=0.205 Sum_probs=189.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC--------CeEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--------QEKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--------~~~~l 418 (626)
.+.||+|+||.||+|+. .+|+.||||++..... ....+.+|+++++.++||||+++++++... +..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 47899999999999996 5799999999865442 345788999999999999999999998873 46899
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+++ +|.+.+.. ....+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||+++..
T Consensus 102 v~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 102 VFDFCEH-DLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIH----RNKILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp EEECCSE-EHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCC-CHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 9999985 78777763 2346999999999999999999999 579999999999999999999999999998653
Q ss_pred CC-------Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh--cccccccc
Q 006903 499 NH-------DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR--EEWTVEVF 568 (626)
Q Consensus 499 ~~-------~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~--~~~~~~~~ 568 (626)
.. ......++..|++||.... ..++.++|||||||++|||+||+.||........ ...+.. .....+..
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~ 253 (351)
T 3mi9_A 175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LALISQLCGSITPEVW 253 (351)
T ss_dssp CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTS
T ss_pred cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChhhc
Confidence 21 1123456888999998754 4579999999999999999999999875433222 111111 00000000
Q ss_pred cHH------------------HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 569 DEV------------------LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 569 d~~------------------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
... .............+.+++.+||+.||++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000 00000000012347899999999999999999999873
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-38 Score=338.25 Aligned_cols=257 Identities=17% Similarity=0.251 Sum_probs=188.2
Q ss_pred ccccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEEe
Q 006903 349 APAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVYE 421 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~E 421 (626)
...+.||+|+||.||+|+. .+|+.||||++.... ..+.+|++++++++|||||++++++... ...++|||
T Consensus 57 ~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e 133 (420)
T 1j1b_A 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 133 (420)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence 3457899999999999996 469999999986532 2344799999999999999999988642 13679999
Q ss_pred ecCCCChhHhhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC-CCeEEeeccCccccC
Q 006903 422 YQPNGSLFNLLHG-SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN-MEPCISEYGLIVTEN 499 (626)
Q Consensus 422 y~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGl~~~~~ 499 (626)
|+++ ++.+.+.. ......+++..+..++.||++||.||| +.+|+||||||+|||++.+ +.+||+|||+++...
T Consensus 134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 9986 66665532 123457999999999999999999999 6899999999999999965 568999999997532
Q ss_pred C--Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-cc------------
Q 006903 500 H--DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-EW------------ 563 (626)
Q Consensus 500 ~--~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-~~------------ 563 (626)
. ......++..|++||.... ..++.++|||||||++|||++|+.||.......... .+... ..
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~-~i~~~lg~p~~~~~~~~~~~ 287 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV-EIIKVLGTPTREQIREMNPN 287 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHHHCSCCHHHHHHHCSC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCCHHHHHhhChh
Confidence 2 2233467889999998754 468999999999999999999999997654332222 21110 00
Q ss_pred ccccccHHH----HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 564 TVEVFDEVL----IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 564 ~~~~~d~~~----~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
..+...+.+ ............+.+|+.+||+.||++|||+.|+++ .++++.
T Consensus 288 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 000000000 000011122346889999999999999999999986 344443
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=329.29 Aligned_cols=253 Identities=17% Similarity=0.204 Sum_probs=198.1
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC------------------HHHHHHHHHHhccCCCCCccccceEEEe
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS------------------SEDFKNRMQKIDHVKHPNVLPPLAYYCS 412 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~------------------~~~~~~ei~~l~~l~H~nIv~l~g~~~~ 412 (626)
.+.||+|+||.||+|.. +|+.||||.+...... .+.+.+|++++++++||||+++++++..
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 47899999999999999 8999999998643211 1789999999999999999999999999
Q ss_pred CCeEEEEEeecCCCChhHh------hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC
Q 006903 413 KQEKLLVYEYQPNGSLFNL------LHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME 486 (626)
Q Consensus 413 ~~~~~lv~Ey~~~g~L~~~------l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~ 486 (626)
.+..++||||+++|+|.++ +.. .....+++..+..++.|++.||.|||+ ..||+||||||+||+++.++.
T Consensus 115 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dl~p~Nil~~~~~~ 190 (348)
T 2pml_X 115 YDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHN---EKNICHRDVKPSNILMDKNGR 190 (348)
T ss_dssp SSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHH---TSCEECCCCCGGGEEECTTSC
T ss_pred CCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhc---cCCEeecCCChHhEEEcCCCc
Confidence 9999999999999999999 542 124679999999999999999999993 279999999999999999999
Q ss_pred eEEeeccCccccCC-CccccccccccchhhccccC-CCCC-cchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc
Q 006903 487 PCISEYGLIVTENH-DQSFLAQTSSLKINDISNQM-CSTI-KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW 563 (626)
Q Consensus 487 ~kl~DFGl~~~~~~-~~~~~~~~~~~~~pe~~~~~-~~~~-k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 563 (626)
+||+|||++..... ......++..|++||..... .++. ++|||||||++|||+||+.||.......+....+.....
T Consensus 191 ~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~ 270 (348)
T 2pml_X 191 VKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI 270 (348)
T ss_dssp EEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCC
T ss_pred EEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCc
Confidence 99999999875322 22344678889999998766 4555 999999999999999999999865553444444433221
Q ss_pred ccccc-----cHHH--HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 564 TVEVF-----DEVL--IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 564 ~~~~~-----d~~~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..... .+.. ............+.+++.+||+.||++|||+.|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 271 EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11000 0000 000000122345889999999999999999999987
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-38 Score=320.16 Aligned_cols=247 Identities=19% Similarity=0.250 Sum_probs=182.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+|+.||||+++...... +.+.++...++.++||||+++++++..++..++||||++ |
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-T 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-E
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-c
Confidence 47899999999999995 579999999997653322 234445555888999999999999999999999999997 5
Q ss_pred ChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCC-CceeccCCCCCeeeCCCCCeEEeeccCccccCCC--c
Q 006903 427 SLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELRED-GIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--Q 502 (626)
Q Consensus 427 ~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~ 502 (626)
+|.+++... .....+++..+..++.|++.||.||| ++ +|+||||||+||+++.++.+||+|||++...... .
T Consensus 91 ~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 166 (290)
T 3fme_A 91 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH----SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166 (290)
T ss_dssp EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----HHSCCCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh----hcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccc
Confidence 888877531 23457999999999999999999999 44 8999999999999999999999999998654322 2
Q ss_pred cccccccccchhhcc----ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 SFLAQTSSLKINDIS----NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~----~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....++..|++||.. ....++.++|||||||++|||+||+.||...................... .
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------~ 236 (290)
T 3fme_A 167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP----------A 236 (290)
T ss_dssp ---CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCC----------T
T ss_pred cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcc----------c
Confidence 234578889999985 45567889999999999999999999997544433333333322211110 0
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHh
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAV--MINN 612 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~ 612 (626)
......+.+++.+||+.||++|||+.|+++ .+..
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~ 272 (290)
T 3fme_A 237 DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272 (290)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred ccCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence 112235788999999999999999999987 4443
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-38 Score=329.07 Aligned_cols=260 Identities=15% Similarity=0.209 Sum_probs=183.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCe-------EEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE-------KLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~-------~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .+|+.||||++.......+.+.+|++.++.++||||+++++++...+. .++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~ 107 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY 107 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEEC
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeec
Confidence 47899999999999996 568999999987655555677888999999999999999999876443 7899999
Q ss_pred cCCCChhHhhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCccccCC
Q 006903 423 QPNGSLFNLLHG-SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTENH 500 (626)
Q Consensus 423 ~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~~~ 500 (626)
+++ +|.+.+.. ......+++..+..++.|++.||.|||. ++.+|+||||||+|||++. ++.+||+|||+++....
T Consensus 108 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~ 184 (360)
T 3e3p_A 108 VPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL--PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP 184 (360)
T ss_dssp CSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS--TTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCT
T ss_pred ccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC--CCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCC
Confidence 986 54443321 1234578999999999999999999993 3679999999999999997 89999999999875433
Q ss_pred C--ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-cc------------
Q 006903 501 D--QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-WT------------ 564 (626)
Q Consensus 501 ~--~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-~~------------ 564 (626)
. .....++..|++||.... ..++.++|||||||++|||+||+.||....... ....+.+.. ..
T Consensus 185 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3e3p_A 185 SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-QLHEIVRVLGCPSREVLRKLNPSH 263 (360)
T ss_dssp TSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC
T ss_pred CCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-HHHHHHHHcCCCCHHHHHhcccch
Confidence 2 233456888999998754 447999999999999999999999997543322 222221110 00
Q ss_pred --ccccc-----HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 565 --VEVFD-----EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 565 --~~~~d-----~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
....+ ..-............+.+++.+||+.||++|||+.|+++ .++++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 264 TDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp CCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred hhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 00000 000000011123456889999999999999999999987 355544
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-38 Score=323.43 Aligned_cols=249 Identities=18% Similarity=0.279 Sum_probs=191.3
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.... .||+|.++.... ..+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 115 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCc
Confidence 5789999999999999754 499999875432 23568899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC--------
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN-------- 499 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~-------- 499 (626)
|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++ ++.+||+|||++....
T Consensus 116 L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~ 188 (319)
T 2y4i_B 116 LYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLH----AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRE 188 (319)
T ss_dssp HHHHTTS--SCCCCCSHHHHHHHHHHHHHHHHHH----HTTCCCCCCCSTTEEEC---CCEECCCSCCC----------C
T ss_pred HHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccc
Confidence 9999964 2346899999999999999999999 57999999999999998 6799999999875421
Q ss_pred CCccccccccccchhhcccc---------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 500 HDQSFLAQTSSLKINDISNQ---------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 500 ~~~~~~~~~~~~~~pe~~~~---------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
.......++..|++||.... ..++.++|||||||++|||+||+.||.... ............. .....
T Consensus 189 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~-~~~~~- 265 (319)
T 2y4i_B 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-AEAIIWQMGTGMK-PNLSQ- 265 (319)
T ss_dssp CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC-HHHHHHHHHTTCC-CCCCC-
T ss_pred cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHhccCCC-CCCCc-
Confidence 11123346788999998753 346889999999999999999999997432 2222222222211 11100
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcccc
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEER 619 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 619 (626)
......+.+++.+||+.||++|||+.+++++|+++.....+
T Consensus 266 --------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 266 --------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp --------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred --------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 01122478899999999999999999999999999876443
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=340.96 Aligned_cols=242 Identities=19% Similarity=0.234 Sum_probs=195.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCC---CCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDW---SISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 57899999999999995 47899999998643 245678999999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC---CCCCeEEeeccCccccCCC--
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN---NNMEPCISEYGLIVTENHD-- 501 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGl~~~~~~~-- 501 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++ .++.+||+|||+++.....
T Consensus 107 ~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 107 ELFDEIIK---RKRFSEHDAARIIKQVFSGITYMH----KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp BHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 99998853 246899999999999999999999 57999999999999995 4567999999998754332
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||.... .++.++||||+||++|||++|+.||... +..+....+........... ....
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~--------~~~~ 249 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQ--------WRTI 249 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCSCSGG--------GGGS
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCCcc--------cCCC
Confidence 233467889999999865 4889999999999999999999999754 33344444433322211110 0112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...+.+++.+||+.||++|||+.|+++.
T Consensus 250 s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 250 SDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 2347889999999999999999999873
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=320.55 Aligned_cols=247 Identities=20% Similarity=0.263 Sum_probs=194.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEe--CCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCS--KQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~--~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|.. .+++.||+|.+...... .+.+.+|++++++++||||+++++++.. ....++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 47899999999999985 47899999999765433 3568899999999999999999998754 567899999999
Q ss_pred CCChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC-----ceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 425 NGSLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDG-----IAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 425 ~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~-----ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
+|+|.+++.... ....+++..++.++.|++.||.|||+ .+ |+||||||+||+++.++.+||+|||++...
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~----~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR----RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp TEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH----HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred CCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc----ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 999999996421 23458999999999999999999995 45 999999999999999999999999998654
Q ss_pred CCCc---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 499 NHDQ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 499 ~~~~---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.... ....++..|++||......++.++||||||+++|||+||+.||... +..+....+...... .
T Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~i~~~~~~-~--------- 235 (279)
T 2w5a_A 167 NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREGKFR-R--------- 235 (279)
T ss_dssp ---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCC-C---------
T ss_pred ccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc-CHHHHHHHHhhcccc-c---------
Confidence 3322 2235678899999988888899999999999999999999998743 222333332222111 1
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.+......+.+++.+||+.||++|||+.|+++.+...
T Consensus 236 -~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 236 -IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred -CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 0111233588899999999999999999998876543
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=328.34 Aligned_cols=243 Identities=21% Similarity=0.336 Sum_probs=194.1
Q ss_pred cccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--C-------HHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 350 PAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--S-------SEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~-------~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
..+.||+|+||.||+|... +|+.||||+++.... . .+.+.+|+.+++++ +||||+++++++...+..++
T Consensus 98 ~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 177 (365)
T 2y7j_A 98 PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL 177 (365)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEE
T ss_pred cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEE
Confidence 3478999999999999964 799999999875432 1 24578899999998 79999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+++|+|.+++.. ...+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||++...
T Consensus 178 v~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH----~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 178 VFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLH----ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 9999999999999963 246899999999999999999999 579999999999999999999999999998654
Q ss_pred CCC--ccccccccccchhhcccc------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 499 NHD--QSFLAQTSSLKINDISNQ------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 499 ~~~--~~~~~~~~~~~~pe~~~~------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
... .....++..|++||.... ..++.++|||||||++|||+||+.||..... ......+........ .+
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~--~~ 327 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-ILMLRMIMEGQYQFS--SP 327 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCCCCC--HH
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhCCCCCC--Cc
Confidence 322 234567889999998753 2468899999999999999999999975432 222222222211110 00
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. . .....+.+++.+||+.||++|||+.|+++
T Consensus 328 ~~--~----~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 328 EW--D----DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HH--S----SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cc--c----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 0 12235788999999999999999999976
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=326.33 Aligned_cols=251 Identities=18% Similarity=0.225 Sum_probs=191.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC------HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS------SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 94 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcC
Confidence 47899999999999995 46899999999753321 246889999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-- 501 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-- 501 (626)
++ +|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 ~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 167 (346)
T 1ua2_A 95 ET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLH----QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 167 (346)
T ss_dssp SE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred CC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHH----HCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcc
Confidence 86 89988863 3356889999999999999999999 579999999999999999999999999998754322
Q ss_pred -ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc-c-ccccc--------
Q 006903 502 -QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW-T-VEVFD-------- 569 (626)
Q Consensus 502 -~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~-~~~~d-------- 569 (626)
.....++..|++||.... ..++.++|||||||++|||++|..||....... .+..+..... . .+...
T Consensus 168 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 246 (346)
T 1ua2_A 168 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSLPDY 246 (346)
T ss_dssp CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTSSTTC
T ss_pred cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhhhhhccCccc
Confidence 233457888999998754 457899999999999999999999887544332 2222221100 0 00000
Q ss_pred ------HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 570 ------EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 570 ------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+..............+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 247 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000011223468899999999999999999999874
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-39 Score=340.84 Aligned_cols=254 Identities=11% Similarity=0.017 Sum_probs=177.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHH---HHHhccCCCCCccccc-------eEEEeC--
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNR---MQKIDHVKHPNVLPPL-------AYYCSK-- 413 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~e---i~~l~~l~H~nIv~l~-------g~~~~~-- 413 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+| ++.++. +||||++++ +++..+
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTS
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCC
Confidence 47899999999999995 47999999999875532 2456777 455566 799988755 444332
Q ss_pred ---------------CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHH------HHHHHHHHHHHHHHHHhccCCCceec
Q 006903 414 ---------------QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSR------LRVAACVAKALALIHEELREDGIAHG 472 (626)
Q Consensus 414 ---------------~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~------~~i~~~ia~gL~ylH~~~~~~~ivHr 472 (626)
...++||||++ |+|.+++... ...+.+..+ +.++.|++.||+||| +++|+||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH----~~~ivHr 218 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQ----SKGLVHG 218 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHH----HTTEEET
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHH----HCCCccC
Confidence 33799999999 8999999742 223455566 788899999999999 5799999
Q ss_pred cCCCCCeeeCCCCCeEEeeccCccccCCCccccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCcc
Q 006903 473 NLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGFN 550 (626)
Q Consensus 473 Dlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~~ 550 (626)
||||+|||++.++.+||+|||+++..........++..|++||.... ..++.++|||||||++|||+||+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 99999999999999999999999876544434445689999999876 6789999999999999999999999974321
Q ss_pred hhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhhc
Q 006903 551 LATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIKEE 616 (626)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~~~ 616 (626)
.... .................. ........+.+++.+||+.||++|||+.|+++ .++++...
T Consensus 299 ~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 362 (371)
T 3q60_A 299 GIKG---SWKRPSLRVPGTDSLAFG-SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNE 362 (371)
T ss_dssp TCTT---CCCBCCTTSCCCCSCCCT-TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHH
T ss_pred cccc---chhhhhhhhccccccchh-hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHH
Confidence 1000 000000000000000000 00122345888999999999999999999976 55555443
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-38 Score=321.54 Aligned_cols=242 Identities=17% Similarity=0.285 Sum_probs=190.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 103 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEH
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcH
Confidence 478999999999999965 58999999987654 4557899999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCcccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~~~~ 505 (626)
.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.... ......
T Consensus 104 ~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 177 (302)
T 2j7t_A 104 DAIMLE--LDRGLTEPQIQVVCRQMLEALNFLH----SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177 (302)
T ss_dssp HHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC----
T ss_pred HHHHHh--hccCCCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccc
Confidence 999863 2346899999999999999999999 5799999999999999999999999999864311 112234
Q ss_pred ccccccchhhcc-----ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 506 AQTSSLKINDIS-----NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 506 ~~~~~~~~pe~~-----~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
.++..|++||.. ....++.++||||||+++|||+||+.||..... .............. ... ...
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~--------~~~ 247 (302)
T 2j7t_A 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-MRVLLKIAKSDPPT-LLT--------PSK 247 (302)
T ss_dssp -CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHSCCCC-CSS--------GGG
T ss_pred cCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-HHHHHHHhccCCcc-cCC--------ccc
Confidence 577889999986 355678899999999999999999999875432 22222222221111 000 111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 248 WSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 2235788999999999999999999976
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-38 Score=323.85 Aligned_cols=242 Identities=17% Similarity=0.261 Sum_probs=188.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||.||+|.. .+++.||||.+..... ....+.+|++++++++||||+++++++..++ .++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~ 93 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVL 93 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEE
Confidence 57899999999999985 4689999999875431 1235889999999999999999999987654 89999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC---eEEeeccCccc
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME---PCISEYGLIVT 497 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl~~~ 497 (626)
||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++. +||+|||++..
T Consensus 94 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 94 ELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLH----ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp ECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 99999999999953 357899999999999999999999 579999999999999987654 99999999876
Q ss_pred cCCCc--cccccccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 498 ENHDQ--SFLAQTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 498 ~~~~~--~~~~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
..... ....++..|++||... ...++.++|||||||++|||+||+.||............+...... ..+..
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~ 243 (322)
T 2ycf_A 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN---FIPEV 243 (322)
T ss_dssp CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCC---CCHHH
T ss_pred cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccc---cCchh
Confidence 54332 2345788999999863 4567899999999999999999999997543322222222221111 01111
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. ......+.+++.+||+.||++|||+.|+++
T Consensus 244 ~-----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 244 W-----AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp H-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred h-----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0 112345889999999999999999999975
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=328.05 Aligned_cols=248 Identities=19% Similarity=0.247 Sum_probs=189.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeE------EEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEK------LLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~------~lv~ 420 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+.+++.++||||+++++++...+.. ++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 47899999999999984 56999999999765433 35788999999999999999999999877654 9999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+. |+|.+++. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 127 e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 127 PFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp ECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred cccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 9997 68988884 24899999999999999999999 57999999999999999999999999999976655
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-cc-----cccccHHHH
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-WT-----VEVFDEVLI 573 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-~~-----~~~~d~~~~ 573 (626)
......++..|++||.... ..++.++|||||||++|||+||+.||...... +....+.... .. ....+....
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 5555667889999998765 67899999999999999999999999754332 2222221110 00 000000000
Q ss_pred ----h---------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 574 ----A---------EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 574 ----~---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
. ....+.....+.+++.+||+.||++|||+.|+++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 00011123468899999999999999999999873
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=340.68 Aligned_cols=241 Identities=20% Similarity=0.233 Sum_probs=191.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|+. .++..||||++.... ...+.+.+|+++++.++|||||++++++.+.+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 121 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 57899999999999995 478999999997643 23567899999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC---CCeEEeeccCccccCCC--
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN---MEPCISEYGLIVTENHD-- 501 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl~~~~~~~-- 501 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.. +.+||+|||++......
T Consensus 122 ~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 122 ELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLH----KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp BHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 99998853 246899999999999999999999 5799999999999999764 45999999998654332
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||+.. ..++.++|||||||++|||++|+.||... ...+....+......... +. ....
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~--~~------~~~~ 264 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQ-TDQEILRKVEKGKYTFDS--PE------WKNV 264 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCCCS--GG------GTTS
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCc--hh------cccC
Confidence 23356888999999876 45889999999999999999999999754 333444444333222111 00 0112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||+.|+++
T Consensus 265 s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 265 SEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 235788999999999999999999986
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=341.74 Aligned_cols=241 Identities=19% Similarity=0.240 Sum_probs=193.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--------------CCHHHHHHHHHHhccCCCCCccccceEEEeCCe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--------------ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE 415 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--------------~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~ 415 (626)
.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++++++||||+++++++.+...
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 47899999999999995 468899999987543 224678999999999999999999999999999
Q ss_pred EEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC---CeEEeec
Q 006903 416 KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM---EPCISEY 492 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DF 492 (626)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++ .+||+||
T Consensus 121 ~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 193 (504)
T 3q5i_A 121 FYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLH----KHNIVHRDIKPENILLENKNSLLNIKIVDF 193 (504)
T ss_dssp EEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred EEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCcHHHEEEecCCCCccEEEEEC
Confidence 9999999999999999863 246899999999999999999999 57999999999999999775 6999999
Q ss_pred cCccccCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 493 GLIVTENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 493 Gl~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
|++...... .....+++.|++||.... .++.++||||+||++|||++|+.||... +..+....+.........
T Consensus 194 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~--- 268 (504)
T 3q5i_A 194 GLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQ-NDQDIIKKVEKGKYYFDF--- 268 (504)
T ss_dssp TTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCH---
T ss_pred CCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCCc---
Confidence 998754332 234567889999998764 5789999999999999999999999753 334444444433221110
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
... . .....+.+++.+||+.||++|||++|+++
T Consensus 269 ~~~-~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 269 NDW-K----NISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHH-T----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccc-C----CCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000 1 12235888999999999999999999986
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=330.75 Aligned_cols=195 Identities=18% Similarity=0.254 Sum_probs=166.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CC-----CccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HP-----NVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~-----nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+++.||||+++......+++.+|+++++.++ |+ +|+++++++...+..++||||+
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 47899999999999985 46889999999764444466778888887775 44 4999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC--CCCCeEEeeccCccccCCC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN--NNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGl~~~~~~~ 501 (626)
+ |+|.+++.... ...+++..+..++.|++.||.|||.+ ..+||||||||+|||++ .++.+||+|||+++.....
T Consensus 139 ~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~--~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~ 214 (382)
T 2vx3_A 139 S-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP--ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR 214 (382)
T ss_dssp C-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST--TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC
T ss_pred C-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC--CCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc
Confidence 6 59999997532 24689999999999999999999942 57899999999999994 5788999999999876555
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF 549 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~ 549 (626)
.....++..|++||......++.++|||||||++|||+||+.||....
T Consensus 215 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 215 IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 555678889999999988889999999999999999999999997543
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=326.96 Aligned_cols=250 Identities=18% Similarity=0.239 Sum_probs=185.8
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC------------HHHHHHHHHHhccCCCCCccccceEEEeC-----
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS------------SEDFKNRMQKIDHVKHPNVLPPLAYYCSK----- 413 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~------------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~----- 413 (626)
.+.||+|+||.||+|...+|+.||||++...... .+.+.+|++++++++||||+++++++...
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 4789999999999999888999999998653321 26789999999999999999999998543
Q ss_pred CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeecc
Q 006903 414 QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYG 493 (626)
Q Consensus 414 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 493 (626)
...++||||++ |+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 179 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLH----EAGVVHRDLHPGNILLADNNDITICDFN 179 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCTT
T ss_pred ceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH----HCcCEecCCChHHEEEcCCCCEEEEecC
Confidence 35799999998 688888863 3357999999999999999999999 5799999999999999999999999999
Q ss_pred CccccCC--Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc-
Q 006903 494 LIVTENH--DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD- 569 (626)
Q Consensus 494 l~~~~~~--~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d- 569 (626)
++..... ......++..|++||.... ..++.++|||||||++|||+||+.||...... +....+..........+
T Consensus 180 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~ 258 (362)
T 3pg1_A 180 LAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQLNKIVEVVGTPKIEDV 258 (362)
T ss_dssp C---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHH
T ss_pred cccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCChHHh
Confidence 9864322 2233467788999998765 66899999999999999999999999754322 22222211100000000
Q ss_pred -----HHH--------------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 570 -----EVL--------------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 570 -----~~~--------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.. ......+.....+.+++.+||+.||++|||+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 000 000001112345889999999999999999999987
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=327.37 Aligned_cols=247 Identities=16% Similarity=0.234 Sum_probs=185.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCC------eEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ------EKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~------~~~lv~ 420 (626)
.+.||+|+||.||+|.. .+++.||||++...... .+.+.+|+++++.++||||+++++++...+ ..++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 47899999999999984 56899999999764433 356889999999999999999999987654 689999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||++ |+|.+++. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 110 e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 110 ELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp ECCS-EEHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred EcCC-CCHHHHHh-----hccCHHHHHHHHHHHHHHHHHHH----HCCeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 9997 47888885 24889999999999999999999 57999999999999999999999999999875433
Q ss_pred C--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc--c---ccccH---
Q 006903 501 D--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT--V---EVFDE--- 570 (626)
Q Consensus 501 ~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~--~---~~~d~--- 570 (626)
. .....++..|++||......++.++|||||||++|||+||+.||........+. .+...... . ....+
T Consensus 180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN-KVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHC-CCCCCHHHHTTSCHHHH
T ss_pred ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCCHHHHHHhhhHHH
Confidence 2 233467888999999988888999999999999999999999997654433222 22111000 0 00000
Q ss_pred --------------------HHHh--hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 --------------------VLIA--EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 --------------------~~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.... ..........+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000 0011223557899999999999999999999987
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=320.94 Aligned_cols=249 Identities=21% Similarity=0.306 Sum_probs=188.4
Q ss_pred ccccccCCCcceEEEEeC--CCc--EEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD--DGL--MLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~--~g~--~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... +++ .||||.++.... ..+.+.+|++++++++||||+++++++...+ .++||||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~ 101 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTEL 101 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEEC
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEec
Confidence 478999999999999853 333 699999875432 2357889999999999999999999987655 8899999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
+++|+|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 175 (291)
T 1u46_A 102 APLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLE----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175 (291)
T ss_dssp CTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred ccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHH----hCCcccCCCchheEEEcCCCCEEEccccccccccccc
Confidence 9999999999642 246899999999999999999999 5799999999999999999999999999986543322
Q ss_pred ------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 503 ------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 503 ------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
....++..|++||......++.++||||||+++|||++ |+.||... +..+.............
T Consensus 176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~~~~~~~~~~~~~~--------- 245 (291)
T 1u46_A 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQILHKIDKEGERLP--------- 245 (291)
T ss_dssp CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTSCCCCC---------
T ss_pred cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC-CHHHHHHHHHccCCCCC---------
Confidence 12345567999999877778899999999999999999 99998643 33333333333221111
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
........+.+++.+||+.||++|||+.++++.|+++....
T Consensus 246 -~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 246 -RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred -CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 01122345888999999999999999999999999886543
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=331.45 Aligned_cols=241 Identities=21% Similarity=0.287 Sum_probs=192.3
Q ss_pred ccccccCCCcceEEEEe----CCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+++++++ +||||+++++++..++..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 47899999999999986 478999999987532 3346678899999999 6999999999999999999999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 139 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 211 (355)
T 1vzo_A 139 DYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLH----KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA 211 (355)
T ss_dssp CCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCcEEEeeCCCCeeccc
Confidence 99999999999964 246899999999999999999999 57999999999999999999999999999865322
Q ss_pred C----ccccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCc---chhHHHHHHhhcccccccccHH
Q 006903 501 D----QSFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGF---NLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 501 ~----~~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
. .....++..|++||.... ..++.++|||||||++|||+||+.||.... ...............
T Consensus 212 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~------- 284 (355)
T 1vzo_A 212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP------- 284 (355)
T ss_dssp GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC-------
T ss_pred CCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC-------
Confidence 1 223467889999998764 346889999999999999999999986322 222222222221110
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHH
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERP-----SMNQVAVMI 610 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~~L 610 (626)
.+.+....+.+++.+||+.||++|| +++|+++..
T Consensus 285 -----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 285 -----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 1112233578899999999999999 999997743
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-38 Score=320.16 Aligned_cols=242 Identities=20% Similarity=0.330 Sum_probs=186.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEe-------------CCeE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS-------------KQEK 416 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-------------~~~~ 416 (626)
.+.||+|+||.||+|+. .+++.||||++.......+.+.+|++++++++||||+++++++.. .+..
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTL 90 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCce
Confidence 47899999999999995 579999999996544445678999999999999999999998865 3567
Q ss_pred EEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 417 LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 417 ~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
++||||+++|+|.+++.. ....+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 164 (303)
T 1zy4_A 91 FIQMEYCENGTLYDLIHS--ENLNQQRDEYWRLFRQILEALSYIH----SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164 (303)
T ss_dssp EEEEECCCSCBHHHHHHH--SCGGGCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred EEEEecCCCCCHHHhhhc--cccccchHHHHHHHHHHHHHHHHHH----hCCeecccCCHHhEEEcCCCCEEEeeCcchh
Confidence 999999999999999974 2346788999999999999999999 5799999999999999999999999999986
Q ss_pred ccCCC-----------------ccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHH
Q 006903 497 TENHD-----------------QSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV 558 (626)
Q Consensus 497 ~~~~~-----------------~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~ 558 (626)
..... .....++..|++||..... .++.++|||||||++|||++ |+..+.+..+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~ 241 (303)
T 1zy4_A 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL 241 (303)
T ss_dssp CTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH
T ss_pred hcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhc
Confidence 53211 1223467889999987654 67899999999999999998 554333333333322
Q ss_pred hhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 559 VREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 559 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...... +. ..........+.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~---~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 242 RSVSIE---FP-----PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HSTTCC---CC-----TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cccccc---cC-----ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 221110 00 01122233457889999999999999999999873
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=337.99 Aligned_cols=251 Identities=13% Similarity=0.161 Sum_probs=195.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCcc-ccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVL-PPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv-~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.||||++.... ..+++.+|+++++.++|++.+ .+..++...+..++||||+ +++|
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 47899999999999994 679999999876543 234688999999999885544 4455556677889999999 9999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCCCc---
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
.+++... ...+++..++.|+.||+.||.||| +.+||||||||+|||+ +.++.+||+|||+++......
T Consensus 90 ~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH----~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (483)
T 3sv0_A 90 EDLFNFC--SRKLSLKTVLMLADQMINRVEFVH----SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163 (483)
T ss_dssp HHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence 9999632 346999999999999999999999 5799999999999999 688999999999987543221
Q ss_pred -------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc--hhHHHHHHhhcccccccccHHHH
Q 006903 503 -------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN--LATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 503 -------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
....++..|++||......++.++|||||||++|||++|+.||..... ..+.+..+...... ... ..+
T Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~-~~l- 240 (483)
T 3sv0_A 164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA-TSI-EAL- 240 (483)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH-SCH-HHH-
T ss_pred ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc-ccH-HHH-
Confidence 145678899999999888899999999999999999999999974322 22222222111100 000 000
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.......+.+++.+||+.||++||++.+|++.|+++...
T Consensus 241 ----~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 241 ----CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp ----HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ----hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 011234588999999999999999999999999988653
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-38 Score=330.21 Aligned_cols=251 Identities=20% Similarity=0.247 Sum_probs=192.7
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence 478999999999999954 789999999876432 23578999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC-CCccccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN-HDQSFLA 506 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~-~~~~~~~ 506 (626)
|.+++.. ...+++..+..++.+++.||.|||+ .++|+||||||+|||++.++.+||+|||++.... .......
T Consensus 118 L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 191 (360)
T 3eqc_A 118 LDQVLKK---AGRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 191 (360)
T ss_dssp HHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----C
T ss_pred HHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCC
Confidence 9999964 2468999999999999999999994 2389999999999999999999999999985421 1223346
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHh---hccc--------------------
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVV---REEW-------------------- 563 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~---~~~~-------------------- 563 (626)
++..|++||......++.++|||||||++|||+||+.||...... +...... ....
T Consensus 192 gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
T 3eqc_A 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK-ELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD 270 (360)
T ss_dssp CCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHH-HHHHHHC---------------------------
T ss_pred CCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhcccccccCCCCCCCcccCCCcccccccC
Confidence 788999999998888899999999999999999999998743211 1100000 0000
Q ss_pred ------ccccccHHHHhh---hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 564 ------TVEVFDEVLIAE---AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 564 ------~~~~~d~~~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+..+...... .........+.+++.+||+.||++|||++|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 271 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ---CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000000000000 000112345889999999999999999999987
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=323.58 Aligned_cols=242 Identities=17% Similarity=0.312 Sum_probs=190.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEe------CCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCS------KQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~------~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|+. .+++.||||++.......+.+.+|+++++++ +||||+++++++.. .+..++||||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 47899999999999995 5789999999987666678899999999998 89999999999887 4678999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
+++|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 183 (326)
T 2x7f_A 109 CGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLH----QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183 (326)
T ss_dssp CTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTCCEEECCCTTTC------
T ss_pred CCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc
Confidence 9999999999743 2346899999999999999999999 579999999999999999999999999998653321
Q ss_pred --ccccccccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 502 --QSFLAQTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
.....++..|++||... ...++.++|||||||++|||+||+.||....... ........... ...
T Consensus 184 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~------ 255 (326)
T 2x7f_A 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-ALFLIPRNPAP-RLK------ 255 (326)
T ss_dssp -------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCC-CCS------
T ss_pred cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHhhcCccc-cCC------
Confidence 22345788899999875 4567899999999999999999999997543322 22222211111 000
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+||+.||++|||+.|+++
T Consensus 256 ---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 256 ---SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp ---CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0111235788999999999999999999987
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-38 Score=334.55 Aligned_cols=257 Identities=17% Similarity=0.237 Sum_probs=188.7
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCe------EEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE------KLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~------~~lv~Ey~ 423 (626)
..+.||+|+||.||+|+..++..||+|++..... ...+|+++++.++||||+++++++...+. .++||||+
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 3578999999999999987777799998864332 22379999999999999999999865443 78999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC-CCCCeEEeeccCccccCC--
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN-NNMEPCISEYGLIVTENH-- 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGl~~~~~~-- 500 (626)
+++.+............+++..+..++.|+++||.||| +.+|+||||||+|||++ .++.+||+|||+++....
T Consensus 121 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 121 PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH----SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp SEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred CccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 87544433322223457899999999999999999999 57999999999999999 799999999999875322
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc--------------cccc
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE--------------EWTV 565 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~--------------~~~~ 565 (626)
......++..|++||.... ..++.++|||||||++|||++|+.||.......... .+... .+..
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~-~i~~~~g~p~~~~~~~~~~~~~~ 275 (394)
T 4e7w_A 197 PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV-EIIKVLGTPSREQIKTMNPNYME 275 (394)
T ss_dssp CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHHHCCCCHHHHHHHCGGGSS
T ss_pred CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCCHHHHHhhChhhhh
Confidence 2233456888999998754 458999999999999999999999997554332222 11110 0000
Q ss_pred ccc---cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhhh
Q 006903 566 EVF---DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNIK 614 (626)
Q Consensus 566 ~~~---d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i~ 614 (626)
..+ .+..............+.+++.+||+.||++|||+.|+++. +++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 276 HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp SCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred hccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 000 00000000111233468899999999999999999999873 44444
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=353.36 Aligned_cols=238 Identities=17% Similarity=0.217 Sum_probs=197.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.++||+|+||.||+|+. .+++.||||+++... ...+.+..|.+++..+ +||||+++++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 47899999999999995 468899999987532 3446788899999887 79999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~ 501 (626)
+|+|.+++... ..+++..+..++.||+.||.||| +.+||||||||+|||++.++.+||+|||+++... ..
T Consensus 426 gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH----~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~ 498 (674)
T 3pfq_A 426 GGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQ----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 498 (674)
T ss_dssp SCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH----HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCC
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH----hCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcc
Confidence 99999999642 46999999999999999999999 5799999999999999999999999999987522 22
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||+.....++.++|||||||++|||+||+.||... +..+....+....... +...
T Consensus 499 ~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~ 565 (674)
T 3pfq_A 499 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-DEDELFQSIMEHNVAY------------PKSM 565 (674)
T ss_dssp BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHSSCCCC------------CTTS
T ss_pred cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC-CHHHHHHHHHhCCCCC------------CccC
Confidence 33456899999999998888999999999999999999999999753 4444444444432111 1112
Q ss_pred HHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSM-----NQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~-----~ev~~ 608 (626)
...+.+++.+||+.||++||++ +||.+
T Consensus 566 s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 566 SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp CHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 2357889999999999999998 66654
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=352.01 Aligned_cols=249 Identities=19% Similarity=0.260 Sum_probs=198.5
Q ss_pred cccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
..+.||+|+||.||+|... .+..||||.++.... ..+.+.+|+.++++++||||+++++++ .++..++||||+
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~lv~E~~ 472 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELC 472 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ecCceEEEEEcC
Confidence 4578999999999999863 256899999876432 236789999999999999999999987 456789999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 473 ~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 473 TLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp TTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred CCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999999742 346899999999999999999999 5799999999999999999999999999987643322
Q ss_pred ---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 ---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....++..|++||......++.++|||||||++|||++ |+.||... ...+....+...... . .+
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~-~~~~~~~~i~~~~~~-~----------~~ 614 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV-KNNDVIGRIENGERL-P----------MP 614 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHHTCCC-C----------CC
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHcCCCC-C----------CC
Confidence 12334568999999888888999999999999999997 88888643 333333333222111 0 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
......+.+++.+||+.||++|||+.|+++.|+++.+++
T Consensus 615 ~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 615 PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 122345888999999999999999999999999987543
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=313.25 Aligned_cols=239 Identities=18% Similarity=0.294 Sum_probs=188.3
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +|+.||||.+.... ...+.+.+|++.++.++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence 478999999999999965 79999999986432 3346789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--c
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--S 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~ 503 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++....... .
T Consensus 96 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 168 (276)
T 2h6d_A 96 GELFDYICK---HGRVEEMEARRLFQQILSAVDYCH----RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168 (276)
T ss_dssp CBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----
T ss_pred CcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCChhhEEECCCCCEEEeecccccccCCCccee
Confidence 999999963 246899999999999999999999 5689999999999999999999999999987543322 2
Q ss_pred ccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
...++..|++||......+ +.++||||||+++|||++|+.||... ........+...... .+....
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~~~------------~~~~~~ 235 (276)
T 2h6d_A 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-HVPTLFKKIRGGVFY------------IPEYLN 235 (276)
T ss_dssp --------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCC------------CCTTSC
T ss_pred cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHhhcCccc------------CchhcC
Confidence 3456788999999876654 68999999999999999999999753 222333322222111 001112
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 236 RSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 347789999999999999999999873
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-37 Score=332.41 Aligned_cols=186 Identities=20% Similarity=0.247 Sum_probs=157.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeC-----CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSK-----QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .+++.||||+++..... .+.+.+|++++++++||||+++++++... +..|+|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 47899999999999984 56899999999764433 35788999999999999999999998776 56899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+. |+|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 111 ~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH----~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 182 (432)
T 3n9x_A 111 IAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIH----ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182 (432)
T ss_dssp CCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred cCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence 986 599999963 356999999999999999999999 579999999999999999999999999998754321
Q ss_pred -------------------------ccccccccccchhhcc-ccCCCCCcchhHHHHHHHHHHHcCCCC
Q 006903 502 -------------------------QSFLAQTSSLKINDIS-NQMCSTIKADVYGFGVILLELLTGKLV 544 (626)
Q Consensus 502 -------------------------~~~~~~~~~~~~pe~~-~~~~~~~k~DVwSfGvvl~elltg~~p 544 (626)
.....++..|++||.. ....++.++|||||||++|||++|..|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p 251 (432)
T 3n9x_A 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251 (432)
T ss_dssp ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccc
Confidence 1334678899999975 566789999999999999999985443
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=331.35 Aligned_cols=250 Identities=17% Similarity=0.223 Sum_probs=186.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeC----------------
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK---------------- 413 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~---------------- 413 (626)
.+.||+|+||.||+|.. .+|+.||||++.... ....+|+++++.++||||+++++++...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~ 88 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNK 88 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHcCCCCccchhheeeecCccccccccccccccc
Confidence 47899999999999984 679999999986543 2234799999999999999999998543
Q ss_pred ----------------------CeEEEEEeecCCCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 006903 414 ----------------------QEKLLVYEYQPNGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470 (626)
Q Consensus 414 ----------------------~~~~lv~Ey~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~iv 470 (626)
...++||||++ |+|.+.+... .....+++..+..++.|+++||.||| +.||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~gi~ 163 (383)
T 3eb0_A 89 LGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH----SLGIC 163 (383)
T ss_dssp ---------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----TTTEE
T ss_pred ccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCcCc
Confidence 33789999998 5887777521 23457999999999999999999999 78999
Q ss_pred eccCCCCCeeeC-CCCCeEEeeccCccccCC--Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCC
Q 006903 471 HGNLKSNNILFN-NNMEPCISEYGLIVTENH--DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQN 546 (626)
Q Consensus 471 HrDlkp~NILl~-~~~~~kl~DFGl~~~~~~--~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~ 546 (626)
||||||+|||++ .++.+||+|||+++.... ......++..|++||.... ..++.++|||||||++|||++|+.||.
T Consensus 164 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 243 (383)
T 3eb0_A 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFS 243 (383)
T ss_dssp CSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCC
Confidence 999999999998 688999999999875322 2234456888999998765 458999999999999999999999997
Q ss_pred CCcchhHHHHHHhhcccc-c-----------cc----ccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 547 NGFNLATWVHSVVREEWT-V-----------EV----FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~-~-----------~~----~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.................. . +. ..........+......+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 244 GETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp CSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 654433322211100000 0 00 00000000011123345889999999999999999999985
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=323.28 Aligned_cols=247 Identities=18% Similarity=0.234 Sum_probs=188.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCe------EEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE------KLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~------~~lv~ 420 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+.+++.++||||+++++++...+. .++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 47899999999999985 56999999999765433 3568899999999999999999999887654 49999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+. |+|.+++. ..+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 109 e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 109 PFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp ECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred cccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 9997 68988874 24899999999999999999999 57999999999999999999999999999876555
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc------ccccccHHHH
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW------TVEVFDEVLI 573 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~------~~~~~d~~~~ 573 (626)
......++..|++||.... ..++.++|||||||++|||+||+.||..... .+....+..... .....+....
T Consensus 179 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp -----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH-HHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 4445567889999998765 6778999999999999999999999975432 222222211100 0000000000
Q ss_pred -------------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 574 -------------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 574 -------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...........+.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00001122446889999999999999999999986
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-37 Score=322.09 Aligned_cols=259 Identities=17% Similarity=0.294 Sum_probs=198.1
Q ss_pred ccccccCCCcceEEEEeC-CC-cEEEEEEcCCCCCCHHHHHHHHHHhccCCCCC------ccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD-DG-LMLAVKRLRDWSISSEDFKNRMQKIDHVKHPN------VLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~n------Iv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... ++ +.||+|+++......+.+.+|++++++++|++ ++.+.+++...+..++||||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~ 103 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFEL 103 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEEC
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEec
Confidence 478999999999999853 44 78999999765445567889999999887766 89999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee-------------------CC
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF-------------------NN 483 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl-------------------~~ 483 (626)
+ ++++.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||+ +.
T Consensus 104 ~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 177 (355)
T 2eu9_A 104 L-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLH----ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVK 177 (355)
T ss_dssp C-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEES
T ss_pred c-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEecccccccccccccccccccC
Confidence 9 66777777542 2346899999999999999999999 6899999999999999 56
Q ss_pred CCCeEEeeccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--HHHHhhc
Q 006903 484 NMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW--VHSVVRE 561 (626)
Q Consensus 484 ~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~--~~~~~~~ 561 (626)
++.+||+|||+++..........++..|++||......++.++|||||||++|||+||+.||......... +......
T Consensus 178 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 257 (355)
T 2eu9_A 178 NTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGP 257 (355)
T ss_dssp CCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred CCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence 78999999999987655555567889999999998888899999999999999999999999754332211 1111110
Q ss_pred c--------------------cccccccHHHHh---------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HH
Q 006903 562 E--------------------WTVEVFDEVLIA---------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MI 610 (626)
Q Consensus 562 ~--------------------~~~~~~d~~~~~---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L 610 (626)
. +.....+..... ..........+.+++.+||+.||++|||+.|+++ .+
T Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f 337 (355)
T 2eu9_A 258 IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337 (355)
T ss_dssp CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGG
T ss_pred CcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 0 000000000000 0011233457889999999999999999999985 45
Q ss_pred Hhhhh
Q 006903 611 NNIKE 615 (626)
Q Consensus 611 ~~i~~ 615 (626)
..+..
T Consensus 338 ~~~~~ 342 (355)
T 2eu9_A 338 AGLTP 342 (355)
T ss_dssp GGCCH
T ss_pred cCCCh
Confidence 55443
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-37 Score=314.97 Aligned_cols=240 Identities=21% Similarity=0.280 Sum_probs=188.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccCCCCCccccceEEE--eCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHVKHPNVLPPLAYYC--SKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~--~~~~~~lv~Ey 422 (626)
.+.||+|+||.||++.. .+++.||+|+++... ...+.+.+|++++++++||||+++++++. ..+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 47899999999999995 568999999997532 23467899999999999999999999984 44578999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
+++| |.+++... ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 90 ~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH----~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 90 CVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLH----SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp CSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred ccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 9876 77777542 2357899999999999999999999 579999999999999999999999999998653221
Q ss_pred ----ccccccccccchhhccccCC--CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 502 ----QSFLAQTSSLKINDISNQMC--STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 502 ----~~~~~~~~~~~~pe~~~~~~--~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.....++..|++||...... .+.++||||||+++|||+||+.||... +..+....+......
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~i~~~~~~----------- 231 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-NIYKLFENIGKGSYA----------- 231 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHCCCC-----------
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHhcCCCC-----------
Confidence 12345788899999876543 367999999999999999999999753 333333333322211
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+......+.+++.+||+.||++|||++|+++.
T Consensus 232 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 -IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -CCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011123357789999999999999999999863
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=326.08 Aligned_cols=252 Identities=16% Similarity=0.238 Sum_probs=194.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-----------CCCccccceEEEeCC----
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-----------HPNVLPPLAYYCSKQ---- 414 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-----------H~nIv~l~g~~~~~~---- 414 (626)
.+.||+|+||.||+|.. .+++.||||++.......+.+.+|++++++++ ||||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 47899999999999995 67899999999865445567889999988876 899999999988654
Q ss_pred eEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCC-CceeccCCCCCeeeC------CCCCe
Q 006903 415 EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED-GIAHGNLKSNNILFN------NNMEP 487 (626)
Q Consensus 415 ~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~-~ivHrDlkp~NILl~------~~~~~ 487 (626)
..++||||+ +++|.+++.... ...+++..+..++.|++.||+||| ++ +|+||||||+|||++ ..+.+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH----~~~~ivH~Dikp~NIll~~~~~~~~~~~~ 177 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMH----RRCGIIHTDIKPENVLMEIVDSPENLIQI 177 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHH----HTTCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred eEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHH----hcCCEEecCCChHHeEEeccCCCcCcceE
Confidence 689999999 889999997532 345899999999999999999999 55 999999999999994 44579
Q ss_pred EEeeccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc-----hhHHHHHHhhc-
Q 006903 488 CISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN-----LATWVHSVVRE- 561 (626)
Q Consensus 488 kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~-----~~~~~~~~~~~- 561 (626)
||+|||++...........++..|++||......++.++|||||||++|||+||+.||..... ....+..+...
T Consensus 178 kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (373)
T 1q8y_A 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 257 (373)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred EEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhc
Confidence 999999997665555556788899999999888889999999999999999999999974321 01111111100
Q ss_pred -cccc----------cc-----------------ccHHHH-hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 562 -EWTV----------EV-----------------FDEVLI-AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 562 -~~~~----------~~-----------------~d~~~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.... .. ...... ....+......+.+++.+||+.||++|||++|+++
T Consensus 258 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 258 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred CCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 0000 00 000000 01133556678999999999999999999999987
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-37 Score=317.08 Aligned_cols=248 Identities=18% Similarity=0.188 Sum_probs=183.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEE--------------eCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYC--------------SKQ 414 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~--------------~~~ 414 (626)
.+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++++++||||+++++++. ..+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccC
Confidence 478999999999999965 58999999987544 23467889999999999999999999873 346
Q ss_pred eEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC-CCCCeEEeecc
Q 006903 415 EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN-NNMEPCISEYG 493 (626)
Q Consensus 415 ~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFG 493 (626)
..++||||++ |+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+|||++ +++.+||+|||
T Consensus 96 ~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 96 SVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIH----SANVLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp EEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred ceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCeEEEccCc
Confidence 7899999998 699999953 46899999999999999999999 57999999999999997 56789999999
Q ss_pred CccccCC------Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccc
Q 006903 494 LIVTENH------DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVE 566 (626)
Q Consensus 494 l~~~~~~------~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 566 (626)
+++.... ......++..|++||.... ..++.++|||||||++|||+||+.||...... +....+........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQMQLILESIPVVH 245 (320)
T ss_dssp TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHSCCCC
T ss_pred cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCc
Confidence 9875322 1122345778999997654 56789999999999999999999999755432 22222221110000
Q ss_pred c---------c----cHHHHh-----hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 V---------F----DEVLIA-----EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 ~---------~----d~~~~~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. . ...... ..........+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0 0 000000 0001112346889999999999999999999987
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-37 Score=313.00 Aligned_cols=242 Identities=18% Similarity=0.261 Sum_probs=193.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----------CHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----------SSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----------~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~l 418 (626)
.+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|+++++++. ||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 47899999999999996 4689999999875431 1245789999999996 9999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 102 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 102 VFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp EEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 9999999999999963 346899999999999999999999 579999999999999999999999999998654
Q ss_pred CCC--ccccccccccchhhccc------cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 499 NHD--QSFLAQTSSLKINDISN------QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 499 ~~~--~~~~~~~~~~~~pe~~~------~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
... .....++..|++||... ...++.++||||||+++|||++|+.||.... .......+......... +
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~--~ 251 (298)
T 1phk_A 175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-QMLMLRMIMSGNYQFGS--P 251 (298)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCCCT--T
T ss_pred CCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc-HHHHHHHHhcCCcccCc--c
Confidence 322 23345778899999864 3456889999999999999999999987543 22333333322211110 0
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
........+.+++.+||+.||++|||+.|+++
T Consensus 252 ------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 252 ------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp ------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ------cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00112345888999999999999999999976
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-37 Score=323.03 Aligned_cols=248 Identities=16% Similarity=0.223 Sum_probs=189.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeC-----CeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK-----QEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++++++||||+++++++... ...++||||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~ 111 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcc
Confidence 47899999999999984 4788999999975432 235788999999999999999999998765 368999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
+. |+|.+++.. ..+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||++......
T Consensus 112 ~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 112 ME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp CS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred cC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 97 599999863 35899999999999999999999 579999999999999999999999999998654322
Q ss_pred -----ccccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh---ccccc---cccc
Q 006903 502 -----QSFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR---EEWTV---EVFD 569 (626)
Q Consensus 502 -----~~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~---~~~d 569 (626)
.....++..|++||... ...++.++|||||||++|||+||+.||........ ...+.. ..... ...+
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH-HHHHHHHHCSCCHHHHHTCCC
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHhhh
Confidence 12346788899999754 44579999999999999999999999975433222 222111 00000 0000
Q ss_pred HH---H----------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 570 EV---L----------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 570 ~~---~----------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. . ............+.+++.+||+.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 0 000000112345889999999999999999999987
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=308.60 Aligned_cols=241 Identities=19% Similarity=0.242 Sum_probs=193.4
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 478999999999999964 78999999986543 34578999999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC---CCeEEeeccCccccCCCc-
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN---MEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl~~~~~~~~- 502 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.+ +.+||+|||++.......
T Consensus 107 ~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~ 179 (287)
T 2wei_A 107 ELFDEIIK---RKRFSEHDAARIIKQVFSGITYMH----KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (287)
T ss_dssp BHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence 99998853 246899999999999999999999 5799999999999999754 469999999986543322
Q ss_pred -cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 -SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||..... ++.++||||||+++|||++|+.||... +..+....+.......... .....
T Consensus 180 ~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~ 249 (287)
T 2wei_A 180 MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLP--------QWRTI 249 (287)
T ss_dssp CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCSG--------GGTTS
T ss_pred cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCCch--------hhhhc
Confidence 233467789999987654 789999999999999999999998753 3333333333322111110 00112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 250 SDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 235788999999999999999999987
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=314.54 Aligned_cols=240 Identities=19% Similarity=0.262 Sum_probs=189.4
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCC--CCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVK--HPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~--H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++...+++.||||++...... .+.+.+|++++++++ ||||+++++++...+..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 4789999999999999888999999999755433 356889999999997 5999999999999999999999 568
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||+++ +.+||+|||++.......
T Consensus 112 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~ 183 (313)
T 3cek_A 112 IDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV 183 (313)
T ss_dssp EEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC--------
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcccEEEEC-CeEEEeeccccccccCccccc
Confidence 899999964 246899999999999999999999 579999999999999975 789999999986543221
Q ss_pred --cccccccccchhhcccc-----------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 503 --SFLAQTSSLKINDISNQ-----------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~-----------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
....++..|++||.... ..++.++|||||||++|||+||+.||.......................
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~- 262 (313)
T 3cek_A 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP- 262 (313)
T ss_dssp ------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC-
T ss_pred cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCc-
Confidence 23357888999998754 3578899999999999999999999976544433333333222111110
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
......+.+++.+||+.||++|||+.|+++.
T Consensus 263 ---------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 263 ---------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp ---------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------ccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0112357888999999999999999999874
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-37 Score=319.49 Aligned_cols=243 Identities=18% Similarity=0.247 Sum_probs=166.7
Q ss_pred cccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEe----CCeEEEEEeecC
Q 006903 350 PAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS----KQEKLLVYEYQP 424 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~----~~~~~lv~Ey~~ 424 (626)
..++||+|+||.||+|... +|+.||||++... .....+....++.++||||+++++++.. ....++||||++
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 33 SKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred cceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 3568999999999999955 6999999998653 2222233334567799999999999876 445899999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCccccCCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENHD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~~~~ 501 (626)
+|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||++......
T Consensus 110 gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH----~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~ 184 (336)
T 3fhr_A 110 GGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLH----SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184 (336)
T ss_dssp TEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence 99999999753 2357999999999999999999999 579999999999999986 455999999998754332
Q ss_pred -ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhH---HHHHHhhcccccccccHHHHhhhc
Q 006903 502 -QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLAT---WVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 502 -~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
.....++..|++||......++.++|||||||++|||+||+.||........ ........... ... ..
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~------~~ 256 (336)
T 3fhr_A 185 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG--FPN------PE 256 (336)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------C--CCT------TT
T ss_pred ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccc--cCc------hh
Confidence 2334568889999998777788899999999999999999999864322110 00000000000 000 00
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp STTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0122345888999999999999999999988
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=329.31 Aligned_cols=243 Identities=19% Similarity=0.245 Sum_probs=181.7
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.++||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+.+..++||||+. |+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 4789999999998777778999999998653 245678999999876 89999999999999999999999995 6999
Q ss_pred HhhcCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC-------------CCeEEeec
Q 006903 430 NLLHGSENGQ----SFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN-------------MEPCISEY 492 (626)
Q Consensus 430 ~~l~~~~~~~----~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-------------~~~kl~DF 492 (626)
+++....... ..++..++.++.||+.||+||| +.+|+||||||+|||++.+ +.+||+||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 9997532211 1133346789999999999999 5799999999999999754 48999999
Q ss_pred cCccccCCCc-------cccccccccchhhcccc-------CCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHH
Q 006903 493 GLIVTENHDQ-------SFLAQTSSLKINDISNQ-------MCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHS 557 (626)
Q Consensus 493 Gl~~~~~~~~-------~~~~~~~~~~~pe~~~~-------~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~ 557 (626)
|+++...... ....++..|+|||+... ..++.++|||||||++|||+| |+.||........ .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~---~ 249 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES---N 249 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH---H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH---H
Confidence 9987543321 23467889999998754 567899999999999999999 8999865432221 1
Q ss_pred HhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 558 VVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 558 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.......... ...........+.+++.+||+.||++|||+.|+++
T Consensus 250 i~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 250 IIRGIFSLDEM-----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHTCCCCCCC-----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HhcCCCCcccc-----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11111111100 00112344567889999999999999999999975
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=315.58 Aligned_cols=251 Identities=17% Similarity=0.247 Sum_probs=190.6
Q ss_pred ccccccCCCcceEEEEe--CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccC---CCCCccccceEEE-----eCCeEE
Q 006903 351 AELLGRGKHGSLYRVVL--DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHV---KHPNVLPPLAYYC-----SKQEKL 417 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l---~H~nIv~l~g~~~-----~~~~~~ 417 (626)
.+.||+|+||.||+|.. .+|+.||+|+++.... ....+.+|+++++.+ +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 47899999999999996 4688999999864332 234567787777665 8999999999987 456789
Q ss_pred EEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 418 LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
+||||++ |+|.+++.... ...+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||++..
T Consensus 96 lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH----~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 9999998 69999997432 345899999999999999999999 57999999999999999999999999999865
Q ss_pred cCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-------ccccccc
Q 006903 498 ENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-------EWTVEVF 568 (626)
Q Consensus 498 ~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~ 568 (626)
.... .....++..|++||......++.++|||||||++|||+||+.||........ ...+... .+.....
T Consensus 170 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCGGGSCTTCS
T ss_pred ccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHcCCCCcccCccccc
Confidence 4322 2234568889999998888889999999999999999999999975543322 2222110 1100000
Q ss_pred cHH--H------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 569 DEV--L------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 569 d~~--~------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+. . ............+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 0 000011122345788999999999999999999985
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=327.10 Aligned_cols=241 Identities=18% Similarity=0.254 Sum_probs=180.5
Q ss_pred ccccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 349 APAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
...++||+|+||+||.....+++.||||++.... .+.+.+|+++++++ +|||||++++++.+.+..++||||+. |+
T Consensus 27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~ 103 (432)
T 3p23_A 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-AT 103 (432)
T ss_dssp EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CC
Confidence 3457899999999776556679999999996533 23467899999998 79999999999999999999999996 69
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-----CCCeEEeeccCccccCCC-
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-----NMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-----~~~~kl~DFGl~~~~~~~- 501 (626)
|.+++.... ..+.+..+..++.|++.||.||| +.+|+||||||+|||++. ...+||+|||+++.....
T Consensus 104 L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 104 LQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLH----SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp HHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHH----HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred HHHHHHhcC--CCccchhHHHHHHHHHHHHHHHH----HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 999997432 33455567789999999999999 579999999999999953 346789999998754321
Q ss_pred -----ccccccccccchhhccc---cCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 502 -----QSFLAQTSSLKINDISN---QMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 502 -----~~~~~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
.....++..|++||... ...++.++|||||||++|||+| |+.||...... ........ .......+
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--~~~~~~~~-~~~~~~~~-- 252 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--QANILLGA-CSLDCLHP-- 252 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--HHHHHTTC-CCCTTSCT--
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--HHHHHhcc-CCccccCc--
Confidence 22345789999999886 3456789999999999999999 88888543221 11111111 11111110
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+||+.||++|||+.||++
T Consensus 253 -----~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 253 -----EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -----TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1122334778999999999999999999984
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=319.86 Aligned_cols=246 Identities=17% Similarity=0.245 Sum_probs=171.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHH-HhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQ-KIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~-~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+|+.||||+++.... ...++..|+. +++.++||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 47899999999999996 4799999999976432 2235566666 77888999999999999999999999999985
Q ss_pred ChhHhhcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCC-CceeccCCCCCeeeCCCCCeEEeeccCccccCCC--
Q 006903 427 SLFNLLHG--SENGQSFDWGSRLRVAACVAKALALIHEELRED-GIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-- 501 (626)
Q Consensus 427 ~L~~~l~~--~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-- 501 (626)
+|.+++.. ......+++..+..++.+++.||.|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~----~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 181 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE----NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA 181 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH----HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc----cCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccc
Confidence 88777742 1123578999999999999999999994 5 8999999999999999999999999998654322
Q ss_pred ccccccccccchhhcc----ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 502 QSFLAQTSSLKINDIS----NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~----~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
.....++..|++||.. ....++.++|||||||++|||+||+.||.......+.......... ... . ...
T Consensus 182 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~-~-----~~~ 254 (327)
T 3aln_A 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDP-PQL-S-----NSE 254 (327)
T ss_dssp ------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCC-CCC-C-----CCS
T ss_pred cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCC-CCC-C-----Ccc
Confidence 2233578889999987 4556789999999999999999999999753322221111111100 000 0 000
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 255 EREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0112335888999999999999999999976
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=317.12 Aligned_cols=253 Identities=16% Similarity=0.195 Sum_probs=190.6
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeC-----CeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK-----QEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... +|+.||||++..... ....+.+|++++++++||||+++++++... ...++||||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 478999999999999954 689999999975432 235678999999999999999999987654 678999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
+. |+|.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 96 ~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 96 MQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLH----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp CS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred cC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 97 699999863 35899999999999999999999 579999999999999999999999999998653221
Q ss_pred ------------ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh---ccc--
Q 006903 502 ------------QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR---EEW-- 563 (626)
Q Consensus 502 ------------~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~-- 563 (626)
.....++..|++||.... ..++.++|||||||++|||++|+.||........ ...+.. ...
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFGIIGTPHSD 245 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCST
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCchh
Confidence 112356888999997643 6678999999999999999999999975432221 111111 000
Q ss_pred --ccccccHHHH-------------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhh
Q 006903 564 --TVEVFDEVLI-------------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNI 613 (626)
Q Consensus 564 --~~~~~d~~~~-------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i 613 (626)
.......... .....+.....+.+++.+||+.||++|||++|+++ .++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 312 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY 312 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 0000000000 00001122345789999999999999999999987 34444
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=310.48 Aligned_cols=227 Identities=13% Similarity=0.121 Sum_probs=177.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCH----HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISS----EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~----~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +++.||||.+....... +.+.+|++.+.+++||||+++++++...+..|+||||+++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 115 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCC
Confidence 478999999999999964 58999999998765332 6789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
++|.+++.. + ....+..+++.|++.||.||| +.||+||||||+|||++.++.+||+++|..
T Consensus 116 ~~L~~~l~~---~--~~~~~~~~i~~ql~~aL~~lH----~~givH~Dikp~NIll~~~g~~kl~~~~~~---------- 176 (286)
T 3uqc_A 116 GSLQEVADT---S--PSPVGAIRAMQSLAAAADAAH----RAGVALSIDHPSRVRVSIDGDVVLAYPATM---------- 176 (286)
T ss_dssp EEHHHHHTT---C--CCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEEETTSCEEECSCCCC----------
T ss_pred CCHHHHHhc---C--CChHHHHHHHHHHHHHHHHHH----HCCCccCCCCcccEEEcCCCCEEEEecccc----------
Confidence 999999952 1 355578899999999999999 579999999999999999999999866532
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
+ .++.++|||||||++|||+||+.||............ ............. ........+
T Consensus 177 -------~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~l 236 (286)
T 3uqc_A 177 -------P-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA--ERDTAGQPIEPAD----IDRDIPFQI 236 (286)
T ss_dssp -------T-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC--CBCTTSCBCCHHH----HCTTSCHHH
T ss_pred -------C-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH--HHHhccCCCChhh----cccCCCHHH
Confidence 1 2578999999999999999999999754321100000 0000000011111 111223458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+++.+||+.||++| |+.|+++.|+++....
T Consensus 237 ~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 237 SAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred HHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 899999999999999 9999999999987553
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=310.61 Aligned_cols=243 Identities=17% Similarity=0.237 Sum_probs=175.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|... +|+.||||++....... +.+.++..+++.++||||+++++++...+..++||||+ ++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 108 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT 108 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence 478999999999999964 79999999997654322 22344555688889999999999999999999999999 44
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--ccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QSF 504 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~~ 504 (626)
.+..+... ....+++..+..++.+++.||.|||+. .+|+||||||+||+++.++.+||+|||++...... ...
T Consensus 109 ~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (318)
T 2dyl_A 109 CAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEK---HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDR 183 (318)
T ss_dssp EHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHH---HCCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred cHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhh---CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccc
Confidence 55555532 234689999999999999999999941 38999999999999999999999999998653222 223
Q ss_pred cccccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 505 LAQTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 505 ~~~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
..++..|++||... ...++.++|||||||++|||+||+.||.......+............... ..
T Consensus 184 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------~~ 254 (318)
T 2dyl_A 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG---------HM 254 (318)
T ss_dssp ---CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCS---------SS
T ss_pred cCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCc---------cC
Confidence 45788899999873 45678899999999999999999999986544444444443332111000 00
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 255 GFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11234788999999999999999999976
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-37 Score=317.03 Aligned_cols=232 Identities=19% Similarity=0.297 Sum_probs=188.4
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC-------CHHHHHHHHHHhccCC--CCCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI-------SSEDFKNRMQKIDHVK--HPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~-------~~~~~~~ei~~l~~l~--H~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||.||+|. ..+++.||||+++.... ..+.+.+|+.++++++ ||||+++++++...+..++||
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 4789999999999998 45789999999875432 2245778999999996 599999999999999999999
Q ss_pred eecCC-CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC-CCCCeEEeeccCcccc
Q 006903 421 EYQPN-GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN-NNMEPCISEYGLIVTE 498 (626)
Q Consensus 421 Ey~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGl~~~~ 498 (626)
||+.+ ++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++ +++.+||+|||++...
T Consensus 128 e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~ 200 (320)
T 3a99_A 128 ERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCH----NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 200 (320)
T ss_dssp ECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccc
Confidence 99986 899999964 346899999999999999999999 57999999999999999 7889999999998754
Q ss_pred CCC-ccccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 499 NHD-QSFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 499 ~~~-~~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
... .....++..|++||......+ +.++|||||||++|||+||+.||..... ....... .
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~~~~~~~---~-------- 262 (320)
T 3a99_A 201 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIRGQVF---F-------- 262 (320)
T ss_dssp CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHCCCC---C--------
T ss_pred ccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------hhccccc---c--------
Confidence 332 233457888999998765554 6789999999999999999999864211 1111100 0
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+||+.||++|||++|+++
T Consensus 263 -~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 263 -RQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111234788999999999999999999987
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=305.35 Aligned_cols=225 Identities=18% Similarity=0.295 Sum_probs=172.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHh-ccCCCCCccccceEEEe----CCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKI-DHVKHPNVLPPLAYYCS----KQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l-~~l~H~nIv~l~g~~~~----~~~~~lv~Ey~~ 424 (626)
.++||+|+||.||+|.. .+++.||+|+++. ...+.+|++++ +..+||||+++++++.. ....++||||++
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 36799999999999985 5789999999864 35678888887 66799999999999887 677899999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCccccCCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENHD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~~~~ 501 (626)
+|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||++.....
T Consensus 99 ~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~- 172 (299)
T 3m2w_A 99 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG- 172 (299)
T ss_dssp SCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT-
T ss_pred CCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc-
Confidence 99999999753 2346999999999999999999999 579999999999999998 78899999999864321
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
..++.++|||||||++|||+||+.||........ .... ............. ......
T Consensus 173 ------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~-~~~~~~~~~~~~~---~~~~~~ 229 (299)
T 3m2w_A 173 ------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGM-KTRIRMGQYEFPN---PEWSEV 229 (299)
T ss_dssp ------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC--------CCS-CCSSCTTCCSSCH---HHHTTS
T ss_pred ------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-hHHH-HHHHhhccccCCc---hhcccC
Confidence 2346799999999999999999999964322110 0000 0000000000000 000112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 230 SEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 345888999999999999999999987
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=338.01 Aligned_cols=261 Identities=23% Similarity=0.255 Sum_probs=198.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEe------CCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCS------KQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~------~~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++++++||||+++++++.. .+..++|||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmE 98 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEE
Confidence 47899999999999985 5689999999876432 23568899999999999999999998755 667899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC---eEEeeccCcccc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME---PCISEYGLIVTE 498 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl~~~~ 498 (626)
|+++|+|.+++........+++..+..++.+++.||.||| +.||+||||||+||+++.++. +||+|||++...
T Consensus 99 y~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH----s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~ 174 (676)
T 3qa8_A 99 YCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH----ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL 174 (676)
T ss_dssp CCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH----HTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBT
T ss_pred eCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHeEeecCCCceeEEEccccccccc
Confidence 9999999999986555557999999999999999999999 579999999999999997665 899999998764
Q ss_pred CCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc----cccc-----
Q 006903 499 NHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW----TVEV----- 567 (626)
Q Consensus 499 ~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~----~~~~----- 567 (626)
... .....++..|++||......++.++|||||||++|||+||+.||........|......... ..+.
T Consensus 175 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~ 254 (676)
T 3qa8_A 175 DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAV 254 (676)
T ss_dssp TSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSC
T ss_pred ccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcccc
Confidence 332 23346788999999998888999999999999999999999999765444443221111000 0000
Q ss_pred -ccHHHH-hhhccHHHHHHHHHHHhhccCCCCCCCCCHHH-----HHHHHHhhhh
Q 006903 568 -FDEVLI-AEAASEERMLKLLQVALRCINQSPNERPSMNQ-----VAVMINNIKE 615 (626)
Q Consensus 568 -~d~~~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e-----v~~~L~~i~~ 615 (626)
+..... ...........+.+++.+||+.||++|||+.| ..+.++.+..
T Consensus 255 ~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 255 KFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp CCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred ccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 000000 01122234567889999999999999999988 4555655543
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=312.00 Aligned_cols=232 Identities=19% Similarity=0.326 Sum_probs=182.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC-------HHHHHHHHHHhccC----CCCCccccceEEEeCCeEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS-------SEDFKNRMQKIDHV----KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~-------~~~~~~ei~~l~~l----~H~nIv~l~g~~~~~~~~~l 418 (626)
.+.||+|+||.||+|.. .+++.||||++...... ...+.+|++++.++ +||||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 57899999999999984 57899999999765421 23456788888888 89999999999999999999
Q ss_pred EEee-cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC-CCCCeEEeeccCcc
Q 006903 419 VYEY-QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN-NNMEPCISEYGLIV 496 (626)
Q Consensus 419 v~Ey-~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGl~~ 496 (626)
|||| +.+++|.+++.. ...+++..++.++.|++.||.||| +.+|+||||||+||+++ .++.+||+|||++.
T Consensus 116 v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~ 188 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCH----SRGVVHRDIKDENILIDLRRGCAKLIDFGSGA 188 (312)
T ss_dssp EEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HHTEECCCCSGGGEEEETTTTEEEECCCSSCE
T ss_pred EEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChhhEEEeCCCCeEEEEEcchhh
Confidence 9999 789999999964 246899999999999999999999 56899999999999999 88999999999987
Q ss_pred ccCCC-ccccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 497 TENHD-QSFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 497 ~~~~~-~~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
..... .....++..|++||......+ +.++|||||||++|||++|+.||..... .......
T Consensus 189 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~---------- 251 (312)
T 2iwi_A 189 LLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------ILEAELH---------- 251 (312)
T ss_dssp ECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHTCCC----------
T ss_pred hcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-------HhhhccC----------
Confidence 54332 234457888999998765554 4589999999999999999999864211 1111100
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
........+.+++.+||+.||++|||++|+++
T Consensus 252 --~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 252 --FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp --CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred --CcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01112234788999999999999999999987
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=336.16 Aligned_cols=233 Identities=18% Similarity=0.232 Sum_probs=184.6
Q ss_pred ccccccCCCcceEEEEeC--CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCe-----EEEEEe
Q 006903 351 AELLGRGKHGSLYRVVLD--DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE-----KLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~--~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~-----~~lv~E 421 (626)
.+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++++++++||||+++++++...+. .|+|||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 478999999999999964 689999999875432 23568899999999999999999999987665 799999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++++|.+++.. .++|..++.++.||+.||.||| +.|||||||||+|||++.+ .+||+|||+++.....
T Consensus 165 ~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH----~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 165 YVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLH----SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp CCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred eCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH----HCCCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 9999999988742 6899999999999999999999 5799999999999999986 8999999998765443
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||...... +.++|||||||++|||++|..|+..... .... . .. .....
T Consensus 235 -~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~----------~~~~-~-~~-------~~~~~ 293 (681)
T 2pzi_A 235 -GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV----------DGLP-E-DD-------PVLKT 293 (681)
T ss_dssp -SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC----------SSCC-T-TC-------HHHHH
T ss_pred -CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc----------cccc-c-cc-------ccccc
Confidence 3456788999999876544 8899999999999999999888753110 0000 0 00 01112
Q ss_pred HHHHHHHHhhccCCCCCCCCC-HHHHHHHHHhhh
Q 006903 582 MLKLLQVALRCINQSPNERPS-MNQVAVMINNIK 614 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs-~~ev~~~L~~i~ 614 (626)
...+.+++.+||+.||++||+ ++++...|..+.
T Consensus 294 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 294 YDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 345788999999999999995 666666666553
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=318.38 Aligned_cols=235 Identities=12% Similarity=0.138 Sum_probs=174.5
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCC-CCccccc---------eE------
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKH-PNVLPPL---------AY------ 409 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H-~nIv~l~---------g~------ 409 (626)
.++||+|+||.||+|. ..+|+.||||+++... ...+.+.+|+.+++.++| +|..... ..
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 4789999999999999 5679999999987433 224679999999999987 3221111 11
Q ss_pred ------EEe-----CCeEEEEEeecCCCChhHhhcC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccC
Q 006903 410 ------YCS-----KQEKLLVYEYQPNGSLFNLLHG----SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNL 474 (626)
Q Consensus 410 ------~~~-----~~~~~lv~Ey~~~g~L~~~l~~----~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDl 474 (626)
+.. ....+++|+++ +++|.+++.. ......+++..++.++.|++.||+||| +++||||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~iiHrDi 237 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH----HYGLVHTYL 237 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH----HTTEECSCC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCc
Confidence 111 12356777765 6899998841 122346889999999999999999999 579999999
Q ss_pred CCCCeeeCCCCCeEEeeccCccccCCCccccccccccchhhcc----------ccCCCCCcchhHHHHHHHHHHHcCCCC
Q 006903 475 KSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDIS----------NQMCSTIKADVYGFGVILLELLTGKLV 544 (626)
Q Consensus 475 kp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~----------~~~~~~~k~DVwSfGvvl~elltg~~p 544 (626)
||+|||++.++.+||+|||+++..........+ ..|++||.. ....++.++|||||||++|||+||+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998765544444556 889999988 445578899999999999999999999
Q ss_pred CCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 545 QNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
|...... +..... +.. .... +..+.+++.+||+.||++||++.|+++
T Consensus 317 f~~~~~~-~~~~~~---------~~~---~~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAAL-GGSEWI---------FRS---CKNI----PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGG-SCSGGG---------GSS---CCCC----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchh-hhHHHH---------Hhh---cccC----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9743211 110000 000 0011 235888999999999999999877754
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=297.52 Aligned_cols=236 Identities=14% Similarity=0.130 Sum_probs=175.1
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC---------CHHHHHHHHHHhccCC---------CCCccccceE---
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---------SSEDFKNRMQKIDHVK---------HPNVLPPLAY--- 409 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---------~~~~~~~ei~~l~~l~---------H~nIv~l~g~--- 409 (626)
.+.||+|+||.||+|+. +|+.||||+++.... ..+.+.+|++++++++ |||||++.+.
T Consensus 25 ~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~ 103 (336)
T 2vuw_A 25 CEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV 103 (336)
T ss_dssp CEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred eeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence 47899999999999997 689999999975431 2367889999988875 6666655554
Q ss_pred --------------EEe-------------CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 006903 410 --------------YCS-------------KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHE 462 (626)
Q Consensus 410 --------------~~~-------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~ 462 (626)
+.+ .+..++||||+++|++.+.+.. ..+++..+..++.||+.||+|||+
T Consensus 104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~ 179 (336)
T 2vuw_A 104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTASLAVAEA 179 (336)
T ss_dssp ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333 6789999999999987776632 458999999999999999999993
Q ss_pred hccCCCceeccCCCCCeeeCCCC--------------------CeEEeeccCccccCCCccccccccccchhhccccCCC
Q 006903 463 ELREDGIAHGNLKSNNILFNNNM--------------------EPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS 522 (626)
Q Consensus 463 ~~~~~~ivHrDlkp~NILl~~~~--------------------~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~ 522 (626)
+++|+||||||+|||++.++ .+||+|||+++..... ...+++.|++||+..+..
T Consensus 180 ---~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y~aPE~~~g~~- 253 (336)
T 2vuw_A 180 ---SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--IVVFCDVSMDEDLFTGDG- 253 (336)
T ss_dssp ---HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--EEECCCCTTCSGGGCCCS-
T ss_pred ---hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--cEEEeecccChhhhcCCC-
Confidence 25899999999999999887 8999999999765432 346889999999987665
Q ss_pred CCcchhHHHHHH-HHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCC
Q 006903 523 TIKADVYGFGVI-LLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERP 601 (626)
Q Consensus 523 ~~k~DVwSfGvv-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 601 (626)
+.++||||+|++ .+++++|..||.+...................... ....+.....+.+++.+||+.|
T Consensus 254 ~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~dli~~~L~~d----- 323 (336)
T 2vuw_A 254 DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCN-----TPAMKQIKRKIQEFHRTMLNFS----- 323 (336)
T ss_dssp SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCC-----SHHHHHHHHHHHHHHHHGGGSS-----
T ss_pred ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccc-----hhhhhhcCHHHHHHHHHHhccC-----
Confidence 889999998777 77888899887421100111111111111100000 0112345567899999999976
Q ss_pred CHHHHH
Q 006903 602 SMNQVA 607 (626)
Q Consensus 602 s~~ev~ 607 (626)
|++|++
T Consensus 324 sa~e~l 329 (336)
T 2vuw_A 324 SATDLL 329 (336)
T ss_dssp SHHHHH
T ss_pred CHHHHH
Confidence 888887
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-28 Score=271.22 Aligned_cols=181 Identities=17% Similarity=0.135 Sum_probs=128.0
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCC-----------CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI-----------SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~-----------~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
...+.|++|.+.+++ +..|+.+|+|.+..... ..++|.+|+++|+++ .|+||+++++++.+++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 356777777776655 45689999999975421 124699999999999 79999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||++||+|.+++.. ..+++.. +|+.||+.||+|+| ++|||||||||+|||+++++.+||+|||+++..
T Consensus 320 VMEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH----~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALE----KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EEECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHH----HTTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EEecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHH----HCCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999964 3456643 58899999999999 689999999999999999999999999998764
Q ss_pred CCC---ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCC
Q 006903 499 NHD---QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKL 543 (626)
Q Consensus 499 ~~~---~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~ 543 (626)
... .....+++.|++||+..+. +..++|+||+|++++++.++..
T Consensus 390 ~~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 390 PQDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp C---CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred CCCCccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccc
Confidence 432 2335688999999998654 5678999999999888766543
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=239.87 Aligned_cols=185 Identities=31% Similarity=0.552 Sum_probs=166.6
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCcccEEecCCC--CeEEEEEecCCCcee--ccCccccCCCCC
Q 006903 24 VEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQ--KSVRKIVLDGFNLSG--ILDTTSVCKTQS 99 (626)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~c~~~w~gv~c~~~~--~~v~~l~L~~~~l~g--~~~~~~~~~l~~ 99 (626)
+.++|++||++||+++. ++. .+.+|+.++|||.+.|.||+|+... ++|+.|+|++++++| .+|. .+..+++
T Consensus 3 c~~~~~~aL~~~k~~~~--~~~--~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~ 77 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLG--NPT--TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPY 77 (313)
T ss_dssp SCHHHHHHHHHHHHHTT--CCG--GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTT
T ss_pred CCHHHHHHHHHHHHhcC--Ccc--cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCC
Confidence 45788999999999994 222 4678987789996569999998654 689999999999999 7875 7999999
Q ss_pred ccEEEccc-CCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcC
Q 006903 100 LVVLSLEE-NNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAE 177 (626)
Q Consensus 100 L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~ 177 (626)
|++|+|++ |++.|.+|..|+++++|++|+|++|+++|.+|..+.++++|++|||++|.+++.+|. +..+++|++|+++
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 99999995 999999999999999999999999999999999999999999999999999999997 9999999999999
Q ss_pred CCcccccCCCC--CCC-CccEEEccCCcCCCCCCCCCCC
Q 006903 178 NNQLRGGIPEF--DFS-NLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 178 ~N~l~g~ip~~--~~~-~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
+|+++|.+|.. .++ +|+.|++++|.++|.+|..+..
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~ 196 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN 196 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGG
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhC
Confidence 99999999974 466 8999999999999999987654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=248.92 Aligned_cols=178 Identities=16% Similarity=0.247 Sum_probs=142.0
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---------HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---------SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
+.++||+|+||.||+|.. .++.+|+|+....... .+.+.+|++++++++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 457899999999999954 4788999986543321 234789999999999999998888888888899999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++|+|.+++.. +..++.|+++||.||| +++|+||||||+|||+++ .+||+|||+++....
T Consensus 419 E~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH----~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 419 SYINGKLAKDVIED-----------NLDIAYKIGEIVGKLH----KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp ECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHH----HTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred ECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHH----HCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999953 4589999999999999 579999999999999999 999999999987544
Q ss_pred Cc----------cccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCC
Q 006903 501 DQ----------SFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQ 545 (626)
Q Consensus 501 ~~----------~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~ 545 (626)
.. ....+++.|++||+... ..|+..+|+||..+-.++-+.++.++
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 21 23568899999998865 45677889999999888887766544
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.8e-24 Score=246.64 Aligned_cols=183 Identities=27% Similarity=0.335 Sum_probs=142.5
Q ss_pred hcccCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCcccEEecCCCCeEEEEEecCCCceec---cCc----
Q 006903 19 VVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGI---LDT---- 91 (626)
Q Consensus 19 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~c~~~w~gv~c~~~~~~v~~l~L~~~~l~g~---~~~---- 91 (626)
++++...++|++||++||+++. ++. .+.+|+.++||| +|.||+|+ .++|+.|+|+++++.|. +++
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~--~~~--~l~~W~~~~~~C--~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~ 75 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLP--DKN--LLPDWSSNKNPC--TFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLS 75 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCS--CTT--SSTTCCTTSCGG--GSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTT
T ss_pred CccccCCHHHHHHHHHHHhhCC--Ccc--cccCCCCCCCCc--CCcceEEC--CCcEEEEECCCCCcCCccCccChhHhc
Confidence 3344445789999999999996 333 578998778999 79999998 47999999999999997 543
Q ss_pred ------------------cccCCCCCccEEEcccCCCcccCCc--cccCCCCCcEEEeeccccccccChhh-hcCCCCCe
Q 006903 92 ------------------TSVCKTQSLVVLSLEENNIAGTVSQ--EISNCKQLTHLYVGRNKLSGNLPDSL-SKLNNLKR 150 (626)
Q Consensus 92 ------------------~~~~~l~~L~~L~ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~ip~~~-~~l~~L~~ 150 (626)
..++.+++|++|+|++|.++|.+|. .++++++|++|+|++|.++|.+|..+ .++++|++
T Consensus 76 L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 155 (768)
T 3rgz_A 76 LTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155 (768)
T ss_dssp CTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSE
T ss_pred cCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCE
Confidence 3567778888888888888888887 78888888888888888888888766 77888888
Q ss_pred EEccCCcCCccCCC----ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCC
Q 006903 151 LDISNNNFSSELPD----LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 151 L~ls~N~l~g~~p~----~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~ 209 (626)
|||++|++++.+|. +.++++|++|++++|.++|.+|...+++|+.|++++|.++|.+|.
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 218 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF 218 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc
Confidence 88888888877664 566777777777777777776666677777777777777777765
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.2e-23 Score=237.98 Aligned_cols=163 Identities=32% Similarity=0.585 Sum_probs=144.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccc----------------------------------
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEI---------------------------------- 118 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~---------------------------------- 118 (626)
.+++.|+|++|.++|.+|. .++.+++|+.|+|++|.++|.+|..+
T Consensus 514 ~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 514 ENLAILKLSNNSFSGNIPA-ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp TTCCEEECCSSCCEEECCG-GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCEEECCCCcccCcCCH-HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 4577888888888888874 68888899999999998888887644
Q ss_pred ------------------------------------cCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccC
Q 006903 119 ------------------------------------SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSEL 162 (626)
Q Consensus 119 ------------------------------------~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~ 162 (626)
+++++|++|||++|+|+|.||.+++++++|+.|||++|+|+|.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 33567899999999999999999999999999999999999999
Q ss_pred CC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCC--CCCCcccCCCCCCCCCCCCCCCCCCCC
Q 006903 163 PD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGV--NGRLGADSFSGNPGLCGKPLPNACPPT 237 (626)
Q Consensus 163 p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~--~~~~~~~~~~gn~~lcg~~~~~~c~~~ 237 (626)
|. ++++++|+.||+++|+++|.||.. .+++|+.||+++|+|+|.||.. +.++...+|.||+++||.|++ .|...
T Consensus 673 p~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred ChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 97 999999999999999999999985 6889999999999999999975 457788899999999999886 88754
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.6e-23 Score=231.01 Aligned_cols=182 Identities=22% Similarity=0.355 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHhccCCCCC-----CCCCCCCCCCCCCCCCCc---ccEEecCCCCeEEEEEecCCCceeccCccccCCCC
Q 006903 27 EVKRALVQFMEKLSVGNAA-----RDPNWGWNRSSDPCSGKW---VGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQ 98 (626)
Q Consensus 27 ~~~~~l~~~~~~~~~~~~~-----~~~~~~w~~~~~~c~~~w---~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~ 98 (626)
.|+.||.++++++..++-. .....+|+.++|+| .| .||+|+.. ++|+.|+|++++|+|.+|+ .++.++
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c--~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~-~l~~L~ 105 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD--MWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPD-AIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG--GTTCCTTEEECTT-CCEEEEECTTSCCEEEECG-GGGGCT
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc--cccCCCCeEEcCC-CCEEEEEecCcccCCcCCh-HHhcCc
Confidence 5888999999998532110 01234698888999 79 99999875 7999999999999999985 899999
Q ss_pred CccEEEcccCC---------------------------------------------------------------------
Q 006903 99 SLVVLSLEENN--------------------------------------------------------------------- 109 (626)
Q Consensus 99 ~L~~L~ls~N~--------------------------------------------------------------------- 109 (626)
+|+.|+|++|+
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 99999999984
Q ss_pred ---------CcccCCccccCCCCCcEEEeeccccccc-----------------cChhhh--cCCCCCeEEccCCcCCcc
Q 006903 110 ---------IAGTVSQEISNCKQLTHLYVGRNKLSGN-----------------LPDSLS--KLNNLKRLDISNNNFSSE 161 (626)
Q Consensus 110 ---------l~g~~p~~~~~l~~L~~L~l~~N~l~g~-----------------ip~~~~--~l~~L~~L~ls~N~l~g~ 161 (626)
++| ||..++++++|++|+|++|+|+|. +|+.++ ++++|++|+|++|+++|.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 446 899999999999999999999996 999999 999999999999999999
Q ss_pred CCC-ccCcCCCcEEEcCCCc-ccc-cCCCC--C------CCCccEEEccCCcCCCCCCC--CCCCC
Q 006903 162 LPD-LSRISGLLTFFAENNQ-LRG-GIPEF--D------FSNLLQFNVSNNNLSGPVPG--VNGRL 214 (626)
Q Consensus 162 ~p~-~~~~~~L~~l~l~~N~-l~g-~ip~~--~------~~~L~~l~ls~N~l~g~ip~--~~~~~ 214 (626)
+|. ++++++|+.|++++|+ ++| .+|.. . +++|+.|++++|+++ .+|. .++.+
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l 329 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKM 329 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTC
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccC
Confidence 997 9999999999999998 999 88863 2 389999999999999 8888 55443
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-23 Score=237.50 Aligned_cols=177 Identities=22% Similarity=0.329 Sum_probs=154.5
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCCCCCC-----CC--CCCCc------------ccEEecCCCCeEEEEEecCCCc
Q 006903 25 EEEVKRALVQFMEKLSVGNAARDPNWGWNRSS-----DP--CSGKW------------VGVTCDSRQKSVRKIVLDGFNL 85 (626)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~-----~~--c~~~w------------~gv~c~~~~~~v~~l~L~~~~l 85 (626)
..+|+.||++||+++.. + +|+.++ +| | .| .||+|+. .++|+.|+|++++|
T Consensus 267 ~~~d~~ALl~~k~~l~~--~------~W~~~~~~~~~~~~~C--~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L 335 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDG--K------NWRYYSGTINNTIHSL--NWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGA 335 (876)
T ss_dssp HHHHHHHHHHHHHHTTG--G------GCCCCCSSCSSCCCCC--SCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCC
T ss_pred chHHHHHHHHHHHHcCC--C------CCCcCCCcccccCCcc--ccccccccccccCcCceEecC-CCCEEEEECccCCC
Confidence 34689999999999841 1 676554 67 7 79 9999987 46999999999999
Q ss_pred eeccCccccCCCCCccEEEc-ccCCCccc---------------------------------------------------
Q 006903 86 SGILDTTSVCKTQSLVVLSL-EENNIAGT--------------------------------------------------- 113 (626)
Q Consensus 86 ~g~~~~~~~~~l~~L~~L~l-s~N~l~g~--------------------------------------------------- 113 (626)
+|.+|+ .++.+++|+.|+| ++|.++|.
T Consensus 336 ~G~ip~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 336 KGRVPD-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp EEEECG-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCcCch-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 999985 8999999999999 88866665
Q ss_pred -------------------------CCccccCCCCCcEEEeecccccc-----------------ccChhhh--cCCCCC
Q 006903 114 -------------------------VSQEISNCKQLTHLYVGRNKLSG-----------------NLPDSLS--KLNNLK 149 (626)
Q Consensus 114 -------------------------~p~~~~~l~~L~~L~l~~N~l~g-----------------~ip~~~~--~l~~L~ 149 (626)
||..|+++++|++|+|++|+|+| .||+.++ ++++|+
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred cccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCC
Confidence 88899999999999999999999 4999987 999999
Q ss_pred eEEccCCcCCccCCC-ccCcCCCcEEEcCCCc-ccc-cCCCC---------CCCCccEEEccCCcCCCCCCC--CCCCC
Q 006903 150 RLDISNNNFSSELPD-LSRISGLLTFFAENNQ-LRG-GIPEF---------DFSNLLQFNVSNNNLSGPVPG--VNGRL 214 (626)
Q Consensus 150 ~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~-l~g-~ip~~---------~~~~L~~l~ls~N~l~g~ip~--~~~~~ 214 (626)
+|+|++|+++|.+|. +.++++|+.|++++|+ ++| .+|.. .+++|+.|++++|+|+ .||. .++.+
T Consensus 495 ~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L 572 (876)
T 4ecn_A 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKM 572 (876)
T ss_dssp EEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTC
T ss_pred EEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcC
Confidence 999999999999997 9999999999999998 999 88852 3459999999999999 8998 55443
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-22 Score=202.78 Aligned_cols=128 Identities=17% Similarity=0.244 Sum_probs=107.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC-------------------CHHHHHHHHHHhccCCCCCccccceEEE
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI-------------------SSEDFKNRMQKIDHVKHPNVLPPLAYYC 411 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-------------------~~~~~~~ei~~l~~l~H~nIv~l~g~~~ 411 (626)
.+.||+|+||.||+|...+|+.||||.++.... ....+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 478999999999999997799999999964321 1346889999999998 5 77777554
Q ss_pred eCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEee
Q 006903 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISE 491 (626)
Q Consensus 412 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~D 491 (626)
. +..++||||+++|+|.+ +.. .....++.|++.||.||| +.||+||||||+|||++ ++.+||+|
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH----~~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFY----HRGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEEE-TTEEEECC
T ss_pred c-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHH----HCCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 3 56799999999999998 521 124579999999999999 67999999999999999 99999999
Q ss_pred ccCccc
Q 006903 492 YGLIVT 497 (626)
Q Consensus 492 FGl~~~ 497 (626)
||+++.
T Consensus 236 FG~a~~ 241 (282)
T 1zar_A 236 FPQSVE 241 (282)
T ss_dssp CTTCEE
T ss_pred CCCCeE
Confidence 999864
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.81 E-value=9.3e-21 Score=196.64 Aligned_cols=179 Identities=19% Similarity=0.290 Sum_probs=148.9
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCC----CCCCCCCCCCcccEEecC--------CCCeEEEEEecCCCceeccCcc
Q 006903 25 EEEVKRALVQFMEKLSVGNAARDPNWGW----NRSSDPCSGKWVGVTCDS--------RQKSVRKIVLDGFNLSGILDTT 92 (626)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~~~~~~~~~~w----~~~~~~c~~~w~gv~c~~--------~~~~v~~l~L~~~~l~g~~~~~ 92 (626)
..+++.||++||..+..+. . ....+| +...++| .|.|+.|+. ...+|+.|+|++|+|. .+|.
T Consensus 25 ~~~~~~aLl~~k~~~~~~~-~-~~~~~w~~~~~~~~~~~--~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~- 98 (328)
T 4fcg_A 25 LRPYHDVLSQWQRHYNADR-N-RWHSAWRQANSNNPQIE--TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD- 98 (328)
T ss_dssp CCCHHHHHHHHHHHHHHCC-T-THHHHHHHHTTTCTTSC--CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS-
T ss_pred CchHHHHHHHHHHhccCCc-h-hhhhhhccccccccccc--ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh-
Confidence 3467889999999885322 1 123467 3456788 699999952 2367999999999998 6664
Q ss_pred ccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccC----
Q 006903 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSR---- 167 (626)
Q Consensus 93 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~---- 167 (626)
.++.+++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|. +..
T Consensus 99 ~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccch
Confidence 6888999999999999999 89999999999999999999999 8999999999999999999999999997 543
Q ss_pred -----cCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCC
Q 006903 168 -----ISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 168 -----~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
+++|+.|++++|+++ .+|.. .+++|+.|++++|.+++ +|..++.
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~ 227 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHH 227 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGG
T ss_pred hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhcc
Confidence 899999999999999 77764 58899999999999996 5544443
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.2e-20 Score=191.25 Aligned_cols=160 Identities=28% Similarity=0.501 Sum_probs=105.4
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCC-CCcEEEeeccccccccChh----------
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCK-QLTHLYVGRNKLSGNLPDS---------- 141 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-~L~~L~l~~N~l~g~ip~~---------- 141 (626)
.+++.|+|++|.++|.+|. .+..+++|+.|+|++|.++|.+|..+.+++ +|++|+|++|+++|.+|..
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCCCG-GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred CCCCEEeCCCCccCCcCCh-HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEE
Confidence 3466666666666665543 455666666666666666666666666655 5666666655555555544
Q ss_pred -------------hhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCC
Q 006903 142 -------------LSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 142 -------------~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ 206 (626)
+.++++|+.|+|++|.+++.+|.+..+++|+.|++++|+++|.+|.. .+++|+.|++++|+++|.
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 283 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccccc
Confidence 44555555555556666555555666677777777777777777763 477888888888888888
Q ss_pred CCCC--CCCCcccCCCCCCCCCCCCCCCCC
Q 006903 207 VPGV--NGRLGADSFSGNPGLCGKPLPNAC 234 (626)
Q Consensus 207 ip~~--~~~~~~~~~~gn~~lcg~~~~~~c 234 (626)
+|.. +.++....+.||+.+||.|++ .|
T Consensus 284 ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 284 IPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp CCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 8875 234555678899999997765 45
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.7e-19 Score=177.32 Aligned_cols=136 Identities=18% Similarity=0.213 Sum_probs=104.2
Q ss_pred cccccccCCCcceEEEEe-CCCcE--EEEEEcCCCCCC-------------------------HHHHHHHHHHhccCCCC
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLM--LAVKRLRDWSIS-------------------------SEDFKNRMQKIDHVKHP 401 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~--vAvK~l~~~~~~-------------------------~~~~~~ei~~l~~l~H~ 401 (626)
..+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|++.+.+++|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 347899999999999997 78989 999987543211 12578999999999988
Q ss_pred CccccceEEEeCCeEEEEEeecCC-C----ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCC
Q 006903 402 NVLPPLAYYCSKQEKLLVYEYQPN-G----SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKS 476 (626)
Q Consensus 402 nIv~l~g~~~~~~~~~lv~Ey~~~-g----~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp 476 (626)
++....-+.. +..++||||+.+ | +|.++... .++.....++.|++.||.|||. +.||+||||||
T Consensus 131 ~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~---~~givHrDlkp 199 (258)
T 1zth_A 131 GVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQ---EAELVHADLSE 199 (258)
T ss_dssp TCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHH---TSCEECSSCST
T ss_pred CCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCH
Confidence 7533222222 357899999942 4 67666531 2244577899999999999994 36899999999
Q ss_pred CCeeeCCCCCeEEeeccCcccc
Q 006903 477 NNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 477 ~NILl~~~~~~kl~DFGl~~~~ 498 (626)
+|||+++ .++|+|||++...
T Consensus 200 ~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 200 YNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TSEEESS--SEEECCCTTCEET
T ss_pred HHEEEcC--cEEEEECcccccC
Confidence 9999998 9999999998654
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-18 Score=167.93 Aligned_cols=152 Identities=16% Similarity=0.215 Sum_probs=96.9
Q ss_pred CCCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEE
Q 006903 57 DPCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHL 127 (626)
Q Consensus 57 ~~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 127 (626)
..|...|..+.|+.+. ..++.|+|++|+|++..+...+..+++|+.|+|++|+|++..|..|.++++|++|
T Consensus 7 ~~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 7 EKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 3454356666665431 2355667777777665544445666677777777777776555566677777777
Q ss_pred EeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCC
Q 006903 128 YVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 128 ~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~ 204 (626)
+|++|+|++..|..|..+++|++|+|++|+|++..|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.|+
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 7777777665555566677777777777777766654 666667777777777776665543 3666677777777666
Q ss_pred CCCC
Q 006903 205 GPVP 208 (626)
Q Consensus 205 g~ip 208 (626)
+..+
T Consensus 167 c~c~ 170 (220)
T 2v70_A 167 CNCY 170 (220)
T ss_dssp CSGG
T ss_pred CCCc
Confidence 5443
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.9e-18 Score=166.70 Aligned_cols=137 Identities=21% Similarity=0.308 Sum_probs=66.6
Q ss_pred CCCCCCCCCCCcccEEecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeec
Q 006903 52 WNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGR 131 (626)
Q Consensus 52 w~~~~~~c~~~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 131 (626)
|......| +|.+|.|.... +. .+|. . -.++|+.|+|++|++++..|..+.++++|++|+|++
T Consensus 12 ~~~~~~~C--s~~~v~c~~~~------------l~-~ip~-~--~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 73 (229)
T 3e6j_A 12 ACPSQCSC--SGTTVDCRSKR------------HA-SVPA-G--IPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGS 73 (229)
T ss_dssp CCCTTCEE--ETTEEECTTSC------------CS-SCCS-C--CCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cCCCCCEE--eCCEeEccCCC------------cC-ccCC-C--CCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCC
Confidence 44567889 69999997532 11 1211 1 113445555555555544444445555555555555
Q ss_pred cccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCC
Q 006903 132 NKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPV 207 (626)
Q Consensus 132 N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~i 207 (626)
|+|++..+..|..+++|++|+|++|+|++..+. +..+++|+.|++++|+++ .+|.. .+++|+.|++++|+|++..
T Consensus 74 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~ 151 (229)
T 3e6j_A 74 NQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIP 151 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCC
T ss_pred CCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccC
Confidence 555432223344455555555555555444433 344455555555555554 33332 3444555555555554333
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-17 Score=166.73 Aligned_cols=153 Identities=22% Similarity=0.262 Sum_probs=118.5
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|+|++|++++..+ ..+..+++|+.|+|++|++++..|..+.++++|++|+|++|+|++..|..+..+++|++|+
T Consensus 35 ~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSD-ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp TTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEccCCCcCccCH-hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 357788888888887654 3677888889999999988887777788888899999999988876667788888899999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCC---CcccCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR---LGADSFSGNPGLC 226 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~---~~~~~~~gn~~lc 226 (626)
|++|+|++..+. +..+++|+.|++++|++++..|.. .+++|+.|++++|++++..|..+.. +....+.+|+-.|
T Consensus 114 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 114 LGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred cCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 999988877766 678888899999999888665532 4788888999999888777655543 3333455665433
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.8e-18 Score=161.82 Aligned_cols=151 Identities=21% Similarity=0.243 Sum_probs=126.3
Q ss_pred CCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEE
Q 006903 58 PCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLY 128 (626)
Q Consensus 58 ~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 128 (626)
.|...|.+|.|+... .+++.|+|++|++++.. +..+..+++|+.|+|++|++++..+..+.++++|++|+
T Consensus 4 ~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLP-NGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCC-TTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCC-hhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 454479999997542 35889999999998644 44578899999999999999976666678999999999
Q ss_pred eeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCC
Q 006903 129 VGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 129 l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g 205 (626)
|++|++++..+..+..+++|++|+|++|+|++..+. +..+++|+.|++++|++++..+.. .+++|+.|++++|.+++
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 999999976666689999999999999999987776 788999999999999999765542 47889999999998888
Q ss_pred CCCC
Q 006903 206 PVPG 209 (626)
Q Consensus 206 ~ip~ 209 (626)
..|.
T Consensus 163 ~~~~ 166 (208)
T 2o6s_A 163 TCPG 166 (208)
T ss_dssp CTTT
T ss_pred CCCC
Confidence 7764
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.72 E-value=9.4e-18 Score=160.00 Aligned_cols=149 Identities=19% Similarity=0.291 Sum_probs=119.0
Q ss_pred EEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCc-cccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccC
Q 006903 77 KIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQ-EISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISN 155 (626)
Q Consensus 77 ~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~ 155 (626)
.+++++++|. .+|. .+. .+|+.|+|++|++++..|. .+.++++|++|+|++|+|++.+|..|..+++|++|+|++
T Consensus 12 ~l~~s~~~l~-~ip~-~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPR-DIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCCS-SCCS-CCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCcC-cCcc-CCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 5777888884 4553 333 3899999999999976664 489999999999999999998899999999999999999
Q ss_pred CcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCC-CC-CCcccCCCCCCCCCCCC
Q 006903 156 NNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGV-NG-RLGADSFSGNPGLCGKP 229 (626)
Q Consensus 156 N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~-~~-~~~~~~~~gn~~lcg~~ 229 (626)
|+|++..|. +..+++|+.|++++|++++.+|.. .+++|+.|++++|.|++..+-. +. .+....+.++...|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 999998887 889999999999999999988864 5889999999999999887632 11 11222344555556544
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.71 E-value=4.1e-17 Score=159.06 Aligned_cols=129 Identities=20% Similarity=0.295 Sum_probs=77.9
Q ss_pred CCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEc
Q 006903 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFA 176 (626)
Q Consensus 98 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l 176 (626)
++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|+|+...+. +..+++|+.|++
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 4566666666666655555666666666666666666665566666666666666666666654444 556666666666
Q ss_pred CCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCC---CcccCCCCCCCCC
Q 006903 177 ENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR---LGADSFSGNPGLC 226 (626)
Q Consensus 177 ~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~---~~~~~~~gn~~lc 226 (626)
++|++++..|.. .+++|+.|++++|.|++..|..+.. +....+.+|+..|
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 666666555542 3566666666666666655544432 2233445555444
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.4e-17 Score=169.71 Aligned_cols=148 Identities=19% Similarity=0.200 Sum_probs=128.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccC---------CCCCcEEEeeccccccccChhhh
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISN---------CKQLTHLYVGRNKLSGNLPDSLS 143 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~---------l~~L~~L~l~~N~l~g~ip~~~~ 143 (626)
.+++.|+|++|.++ .+|. .+..+++|+.|+|++|++.|.+|..+.. +++|++|+|++|+++ .+|..++
T Consensus 127 ~~L~~L~Ls~n~l~-~lp~-~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~ 203 (328)
T 4fcg_A 127 AGLETLTLARNPLR-ALPA-SIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIA 203 (328)
T ss_dssp TTCSEEEEESCCCC-CCCG-GGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGG
T ss_pred CCCCEEECCCCccc-cCcH-HHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhc
Confidence 46899999999999 6664 6889999999999999999999988765 999999999999998 8999999
Q ss_pred cCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCCcc---cC
Q 006903 144 KLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRLGA---DS 218 (626)
Q Consensus 144 ~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~~~---~~ 218 (626)
++++|++|+|++|++++.++.+..+++|+.|++++|++.+.+|.. .+++|+.|++++|++.+.+|..++.++. ..
T Consensus 204 ~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 283 (328)
T 4fcg_A 204 NLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLD 283 (328)
T ss_dssp GCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEE
T ss_pred CCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEe
Confidence 999999999999999986666999999999999999999999874 5889999999999999999987654433 34
Q ss_pred CCCCC
Q 006903 219 FSGNP 223 (626)
Q Consensus 219 ~~gn~ 223 (626)
+.+|.
T Consensus 284 L~~n~ 288 (328)
T 4fcg_A 284 LRGCV 288 (328)
T ss_dssp CTTCT
T ss_pred CCCCC
Confidence 55554
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.67 E-value=4.6e-16 Score=156.69 Aligned_cols=151 Identities=23% Similarity=0.287 Sum_probs=128.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+.+. +.+..+++|++|+|++|.+++..|..+.++++|++|+|++|++++..|..+..+++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~~---~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI---SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCCC---GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCc---hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 5789999999999873 2688999999999999999987777789999999999999999987777789999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCC---cccCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRL---GADSFSGNPGLC 226 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~---~~~~~~gn~~lc 226 (626)
|++|+|++..|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.+++..|..+..+ ....+.+|+..|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 999999988776 789999999999999999776653 58899999999999999888665443 334556665444
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.4e-16 Score=148.34 Aligned_cols=171 Identities=18% Similarity=0.260 Sum_probs=131.5
Q ss_pred CCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEE
Q 006903 58 PCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLY 128 (626)
Q Consensus 58 ~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 128 (626)
.|.-.|..|.|..+. ..++.|+|++|++++..+...+..+++|+.|+|++|+|++..|..|.++++|++|+
T Consensus 5 ~C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 84 (192)
T 1w8a_A 5 MCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEE
Confidence 444468888886542 36889999999998876544578999999999999999999999999999999999
Q ss_pred eeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCCCC-CccEEEccCCcCCCC
Q 006903 129 VGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFS-NLLQFNVSNNNLSGP 206 (626)
Q Consensus 129 l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~~~-~L~~l~ls~N~l~g~ 206 (626)
|++|+|++..|..|..+++|++|+|++|+|++.+|. +..+++|+.|++++|.+++..+...+. .++...+..+.....
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCC
Confidence 999999998888899999999999999999999887 899999999999999999887642211 122223444555545
Q ss_pred CCCCCCCCcccCCCCCCCCCCC
Q 006903 207 VPGVNGRLGADSFSGNPGLCGK 228 (626)
Q Consensus 207 ip~~~~~~~~~~~~gn~~lcg~ 228 (626)
.|..+....-..+..+.-.|..
T Consensus 165 ~P~~l~~~~l~~l~~~~~~C~~ 186 (192)
T 1w8a_A 165 APSKVRDVQIKDLPHSEFKCSS 186 (192)
T ss_dssp SSTTTTTSBGGGSCTTTCCCCC
T ss_pred CChHHcCCChhhCcHhhcCcCC
Confidence 5555444333344444434543
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-16 Score=167.37 Aligned_cols=169 Identities=20% Similarity=0.176 Sum_probs=135.4
Q ss_pred CCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccC-CCCCccEEEcccCCCcccCCccccCCCCCcEE
Q 006903 58 PCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVC-KTQSLVVLSLEENNIAGTVSQEISNCKQLTHL 127 (626)
Q Consensus 58 ~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 127 (626)
.|...+..|.|.... ..++.|+|++|+|++..+. .+. .+++|+.|+|++|+|++..|..|.++++|++|
T Consensus 15 ~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~-~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 93 (361)
T 2xot_A 15 NCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAE-WTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYL 93 (361)
T ss_dssp TCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTT-SSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChh-hhhhcccccCEEECCCCcCCccChhhccCCCCCCEE
Confidence 454357778886532 3478899999999986543 455 89999999999999998877889999999999
Q ss_pred EeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC-----CCCCccEEEccCC
Q 006903 128 YVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF-----DFSNLLQFNVSNN 201 (626)
Q Consensus 128 ~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~-----~~~~L~~l~ls~N 201 (626)
+|++|+|++..|..|..+++|+.|+|++|+|++..|. +..+++|+.|++++|++++..+.. .+++|+.|++++|
T Consensus 94 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 94 DLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSS
T ss_pred ECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCC
Confidence 9999999977777899999999999999999998776 899999999999999999643332 3789999999999
Q ss_pred cCCCCCCCCCCCCc-----ccCCCCCCCCCC
Q 006903 202 NLSGPVPGVNGRLG-----ADSFSGNPGLCG 227 (626)
Q Consensus 202 ~l~g~ip~~~~~~~-----~~~~~gn~~lcg 227 (626)
+|++..+..+..++ ...+.+|+..|.
T Consensus 174 ~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 174 KLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 99965444443332 245667776663
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1e-15 Score=152.20 Aligned_cols=135 Identities=21% Similarity=0.237 Sum_probs=120.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ ..+..+++|+.|+|++|++++..|..+..+++|++|+|++|+|++..|..+..+++|+.|+
T Consensus 59 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSA-GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp TTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCCEEECCCCcCCccCH-hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 579999999999998654 4688999999999999999987778889999999999999999976666689999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|+|++..|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.|++..+
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 999999988885 899999999999999999776643 58899999999999998744
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.64 E-value=9.9e-16 Score=154.26 Aligned_cols=137 Identities=23% Similarity=0.272 Sum_probs=122.7
Q ss_pred CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 72 QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 72 ~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
..+++.|+|++|++++..+ ..+..+++|+.|+|++|++++..|..+.++++|++|+|++|++++..|..+..+++|+.|
T Consensus 84 l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 162 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPN-GVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL 162 (272)
T ss_dssp CTTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccCccCh-hHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEE
Confidence 3579999999999997654 467899999999999999998777778999999999999999998777778999999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~ 209 (626)
+|++|++++..|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.++|..|.
T Consensus 163 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 163 DLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 9999999988776 789999999999999999877753 588999999999999998884
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-15 Score=148.81 Aligned_cols=158 Identities=15% Similarity=0.231 Sum_probs=128.8
Q ss_pred CCCCCCcccEEecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCc-cccCCCCCcEEEeeccccc
Q 006903 57 DPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQ-EISNCKQLTHLYVGRNKLS 135 (626)
Q Consensus 57 ~~c~~~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~ 135 (626)
..|. .+-.|.. +.+++++|+|+. +|. .+ ...++.|+|++|+|++..|. .|.++++|++|+|++|+|+
T Consensus 3 ~~CP---~~C~C~~-----~~l~~s~n~l~~-iP~-~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~ 70 (220)
T 2v70_A 3 LACP---EKCRCEG-----TTVDCSNQKLNK-IPE-HI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT 70 (220)
T ss_dssp -CCC---TTCEEET-----TEEECCSSCCSS-CCS-CC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC
T ss_pred CCCC---CCCEECC-----CEeEeCCCCccc-Ccc-CC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC
Confidence 3574 3345753 268999999986 443 23 34578999999999987664 5789999999999999999
Q ss_pred cccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCC
Q 006903 136 GNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 136 g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
+..|..|.++++|++|+|++|+|++..|. +..+++|++|++++|++++..|.. .+++|+.|++++|++++..|..+.
T Consensus 71 ~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 150 (220)
T 2v70_A 71 DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFD 150 (220)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTT
T ss_pred EECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhc
Confidence 88777999999999999999999998887 899999999999999999887764 588999999999999998888765
Q ss_pred CCc---ccCCCCCCCCC
Q 006903 213 RLG---ADSFSGNPGLC 226 (626)
Q Consensus 213 ~~~---~~~~~gn~~lc 226 (626)
.+. ...+.+|+-.|
T Consensus 151 ~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 151 TLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TCTTCCEEECCSCCEEC
T ss_pred CCCCCCEEEecCcCCcC
Confidence 433 34556666444
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.64 E-value=5.1e-17 Score=169.47 Aligned_cols=137 Identities=16% Similarity=0.202 Sum_probs=96.9
Q ss_pred ccccccccCCCcceEEEEeCCCcEEEEEEcCCCCC---------------CHHHH--------HHHHHHhccCCCCCccc
Q 006903 349 APAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---------------SSEDF--------KNRMQKIDHVKHPNVLP 405 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---------------~~~~~--------~~ei~~l~~l~H~nIv~ 405 (626)
...+.||+|+||.||+|...+|+.||||+++.... ..... .+|...|.++.+.++..
T Consensus 98 ~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~v 177 (397)
T 4gyi_A 98 SVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPV 177 (397)
T ss_dssp EEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred EecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34678999999999999988999999998753210 01111 24555555554433322
Q ss_pred cceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 406 l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
..-+.. ...+|||||+++++|.++... .....++.|++.+|.||| ..|||||||||.|||+++++
T Consensus 178 p~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH----~~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 178 PEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLA----KHGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEEEEEE
T ss_pred Ceeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHEEEeCCC
Confidence 222212 224799999999888776531 123567899999999999 57999999999999999876
Q ss_pred C----------eEEeeccCccccCC
Q 006903 486 E----------PCISEYGLIVTENH 500 (626)
Q Consensus 486 ~----------~kl~DFGl~~~~~~ 500 (626)
. +.|.||+-+....+
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEETTS
T ss_pred CcccccccccceEEEEeCCcccCCC
Confidence 3 88999998765443
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.7e-16 Score=151.66 Aligned_cols=138 Identities=22% Similarity=0.270 Sum_probs=122.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++. ++..+..+++|++|+|++|++++..+..+.++++|++|+|++|++++..|..+..+++|+.|+
T Consensus 52 ~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSL-PNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp TTCSEEECCSSCCCCC-CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCccCcc-ChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 5799999999999965 444578899999999999999976666789999999999999999977666789999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCCCCCCCcc
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGA 216 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~ 216 (626)
|++|+|++..+. +..+++|+.|++++|.+.+.. ++|+.|+++.|+++|.+|..++.+..
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~-----~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC-----PGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT-----TTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCC-----CCHHHHHHHHHhCCceeeccCccccC
Confidence 999999987776 889999999999999998765 47899999999999999998876554
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.6e-15 Score=152.58 Aligned_cols=137 Identities=22% Similarity=0.277 Sum_probs=94.2
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.|+|++|++++.. +..+..+++|+.|+|++|+++...+..+.++++|++|+|++|++++..+..+..+++|++|+|
T Consensus 38 ~l~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLP-SKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSCCC-TTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCeeC-HHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 4667777777776543 335667777777777777777544444567777777777777777655555677777777777
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
++|++++..|. +..+++|+.|++++|++++..+.. .+++|+.|++++|.+++..|..+
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 177 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAF 177 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHh
Confidence 77777776665 677777777777777777544431 46677777777777776555443
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.1e-16 Score=174.01 Aligned_cols=153 Identities=20% Similarity=0.259 Sum_probs=133.6
Q ss_pred CCCCCcccEEecCC-----------CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcE
Q 006903 58 PCSGKWVGVTCDSR-----------QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTH 126 (626)
Q Consensus 58 ~c~~~w~gv~c~~~-----------~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 126 (626)
.| .|.|+ |+.. ..+++.|+|++|++++..| ..+..+++|++|+|++|++++..|..|.++++|++
T Consensus 3 ~C--~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 78 (549)
T 2z81_A 3 SC--DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGH-GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEH 78 (549)
T ss_dssp EE--CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECS-STTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cC--CCCce-EECCCCccccccccCCCCccEEECcCCccCccCh-hhhhcCCcccEEECCCCCcCccChhhccccccCCE
Confidence 47 58887 8643 1369999999999998765 47899999999999999999988899999999999
Q ss_pred EEeeccccccccChhhhcCCCCCeEEccCCcCCc-cCC-CccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCC
Q 006903 127 LYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSS-ELP-DLSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNN 201 (626)
Q Consensus 127 L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g-~~p-~~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N 201 (626)
|+|++|++++..|..|+++++|++|||++|.+++ .+| .+.++++|++|++++|.+.+.+|.. .+++|+.|++++|
T Consensus 79 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n 158 (549)
T 2z81_A 79 LDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKAL 158 (549)
T ss_dssp EECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred EECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCC
Confidence 9999999998777779999999999999999996 344 4999999999999999987788753 5788999999999
Q ss_pred cCCCCCCCCCCCC
Q 006903 202 NLSGPVPGVNGRL 214 (626)
Q Consensus 202 ~l~g~ip~~~~~~ 214 (626)
.+++.+|..++.+
T Consensus 159 ~l~~~~~~~l~~l 171 (549)
T 2z81_A 159 SLRNYQSQSLKSI 171 (549)
T ss_dssp TCCEECTTTTTTC
T ss_pred cccccChhhhhcc
Confidence 9999999876543
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.5e-15 Score=151.07 Aligned_cols=154 Identities=21% Similarity=0.250 Sum_probs=129.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++ +++..+..+++|+.|+|++|.+++..+..+.++++|++|+|++|++++..|..|..+++|++|+
T Consensus 61 ~~L~~L~l~~n~l~~-i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp TTCCEEECCSSCCSC-CCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCe-eChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 579999999999985 4444567899999999999999987777789999999999999999988788899999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCC---CcccCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR---LGADSFSGNPGLC 226 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~---~~~~~~~gn~~lc 226 (626)
|++|.+++..+. +..+++|+.|++++|++++..|.. .+++|+.|++++|.+++..+..+.. +....+.+|+..|
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 999999987776 889999999999999999766542 5789999999999999766655443 3344567776555
Q ss_pred C
Q 006903 227 G 227 (626)
Q Consensus 227 g 227 (626)
.
T Consensus 220 ~ 220 (270)
T 2o6q_A 220 T 220 (270)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=6.6e-16 Score=173.87 Aligned_cols=147 Identities=18% Similarity=0.202 Sum_probs=127.8
Q ss_pred cEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccc
Q 006903 65 GVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS 135 (626)
Q Consensus 65 gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 135 (626)
.|.|.... ..++.|+|++|+|++.. +..+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+
T Consensus 35 ~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~-~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLG-SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTSCCCEEC-TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCC-HHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 46786431 46899999999999755 457899999999999999999877778999999999999999999
Q ss_pred cccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccc-cCCCC--CCCCccEEEccCCcCCCCCCCCC
Q 006903 136 GNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRG-GIPEF--DFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 136 g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g-~ip~~--~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
+..|..|.+|++|++|+|++|++++..|. ++++++|+.|++++|++++ .+|.. .+++|+.|++++|++++..|..+
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 76667799999999999999999998775 8999999999999999986 45654 58899999999999998877665
Q ss_pred C
Q 006903 212 G 212 (626)
Q Consensus 212 ~ 212 (626)
.
T Consensus 194 ~ 194 (635)
T 4g8a_A 194 R 194 (635)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.63 E-value=2.4e-15 Score=146.48 Aligned_cols=149 Identities=15% Similarity=0.186 Sum_probs=128.8
Q ss_pred CCCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEE
Q 006903 57 DPCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHL 127 (626)
Q Consensus 57 ~~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 127 (626)
..|...|..|.|.... ..++.|+|++|++++..+ ..+..+++|+.|+|++|++++..|..|.++++|++|
T Consensus 7 ~~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 85 (220)
T 2v9t_B 7 AACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPP-GAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 85 (220)
T ss_dssp TTSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECT-TSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEE
T ss_pred CCCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCH-hHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEE
Confidence 3454468899997542 368999999999997654 478899999999999999999889999999999999
Q ss_pred EeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCC
Q 006903 128 YVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 128 ~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~ 204 (626)
+|++|+|++..+..|..+++|++|+|++|+|++..|. +..+++|+.|++++|++++..+.. .+++|+.|++++|.|+
T Consensus 86 ~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 86 VLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 9999999955445578999999999999999998886 899999999999999999877652 5889999999999987
Q ss_pred CC
Q 006903 205 GP 206 (626)
Q Consensus 205 g~ 206 (626)
..
T Consensus 166 c~ 167 (220)
T 2v9t_B 166 CD 167 (220)
T ss_dssp CS
T ss_pred CC
Confidence 53
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=6.4e-16 Score=167.25 Aligned_cols=149 Identities=15% Similarity=0.196 Sum_probs=131.6
Q ss_pred cEEecCCC--------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCC-ccccCCCCCcEEEeeccccc
Q 006903 65 GVTCDSRQ--------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVS-QEISNCKQLTHLYVGRNKLS 135 (626)
Q Consensus 65 gv~c~~~~--------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~ 135 (626)
.|.|+... .+++.|+|++|++++..| ..+..+++|++|+|++|.+.+.+| ..|.++++|++|+|++|+++
T Consensus 14 ~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~ 92 (455)
T 3v47_A 14 NAICINRGLHQVPELPAHVNYVDLSLNSIAELNE-TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL 92 (455)
T ss_dssp EEECCSSCCSSCCCCCTTCCEEECCSSCCCEECT-TTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTC
T ss_pred ccCcCCCCcccCCCCCCccCEEEecCCccCcCCh-hHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccC
Confidence 37886542 468999999999998765 478999999999999999998775 56899999999999999999
Q ss_pred cccChhhhcCCCCCeEEccCCcCCccCCC---ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCCCCCCC
Q 006903 136 GNLPDSLSKLNNLKRLDISNNNFSSELPD---LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 136 g~ip~~~~~l~~L~~L~ls~N~l~g~~p~---~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~g~ip~ 209 (626)
+.+|..|+++++|++|+|++|++++.+|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.+++..|.
T Consensus 93 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 172 (455)
T 3v47_A 93 QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEE 172 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTT
T ss_pred ccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChh
Confidence 99999999999999999999999986543 889999999999999999988863 589999999999999999988
Q ss_pred CCCCC
Q 006903 210 VNGRL 214 (626)
Q Consensus 210 ~~~~~ 214 (626)
.+..+
T Consensus 173 ~l~~l 177 (455)
T 3v47_A 173 DLLNF 177 (455)
T ss_dssp TSGGG
T ss_pred hhhcc
Confidence 76543
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.9e-15 Score=152.36 Aligned_cols=129 Identities=22% Similarity=0.241 Sum_probs=75.4
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.|+|++|.+++..+ ..+..+++|+.|+|++|++++. |.. +.+++|++|+|++|+|+ .+|..+..+++|++|+|
T Consensus 32 ~l~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSL-ATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TCCEEECTTSCCSEEEG-GGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCEEEcCCCcCCccCH-HHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 45666666666665443 2456666666666666666642 222 55666666666666665 45655666666666666
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ 206 (626)
++|+|++..|. +..+++|+.|++++|++++..|.. .+++|+.|++++|+|++.
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 163 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCcc
Confidence 66666655544 556666666666666666443321 345566666666666543
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-15 Score=154.17 Aligned_cols=138 Identities=19% Similarity=0.203 Sum_probs=120.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|+|++|++++..+ ..+..+++|+.|+|++|++++..+..+.++++|++|+|++|++++..|..+.++++|++|+
T Consensus 28 ~~l~~L~ls~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGS-YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCCEECT-TTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCcccccCH-hHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 358999999999998654 3688899999999999999987777899999999999999999988888899999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccc-cCCCC--CCCCccEEEccCCcCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRG-GIPEF--DFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g-~ip~~--~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
+++|++++..+. +..+++|+.|++++|++++ .+|.. .+++|+.|++++|.+++..|..+
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 999999988774 8999999999999999987 45653 58899999999999987666544
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.62 E-value=1e-15 Score=156.79 Aligned_cols=134 Identities=19% Similarity=0.226 Sum_probs=75.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCC-ccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVS-QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|.+.+. +. .+..+++|+.|+|++|++++..+ ..+.++++|++|+|++|.+++.+|..+..+++|++|
T Consensus 78 ~~L~~L~Ls~n~i~~l-~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 78 TSLKYLDLSFNGVITM-SS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp SCCCEEECCSCSEEEE-EE-EEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred cccCEEECCCCccccC-hh-hcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 3566666666666542 22 35556666666666666655433 345556666666666666665555555666666666
Q ss_pred EccCCcCCc-cCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 152 DISNNNFSS-ELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 152 ~ls~N~l~g-~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
+|++|.+++ .+|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.+++..+
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 216 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 216 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCS
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccCh
Confidence 666666655 3343 555566666666666665554432 34556666666666555443
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.3e-15 Score=154.28 Aligned_cols=141 Identities=18% Similarity=0.209 Sum_probs=118.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCC-CcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENN-IAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|.+++..+ ..+..+++|+.|+|++|. +....|..+..+++|++|+|++|++++..|..+.++++|++|
T Consensus 56 ~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDA-AAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp TTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCccceeCH-hhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 578899999999987655 367888999999999997 776667888899999999999999998778888999999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCC-C-CCCCccEEEccCCcCCCCCCCCCCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPE-F-DFSNLLQFNVSNNNLSGPVPGVNGRL 214 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~-~-~~~~L~~l~ls~N~l~g~ip~~~~~~ 214 (626)
+|++|.+++..+. +..+++|+.|++++|++++..+. + .+++|+.|++++|.+++..|..+..+
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 200 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDL 200 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCc
Confidence 9999999887776 78899999999999999866554 2 47889999999999988888776543
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-15 Score=160.03 Aligned_cols=158 Identities=19% Similarity=0.223 Sum_probs=127.0
Q ss_pred CCCCCCCCCCCcccEEecCC-----------CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccC
Q 006903 52 WNRSSDPCSGKWVGVTCDSR-----------QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISN 120 (626)
Q Consensus 52 w~~~~~~c~~~w~gv~c~~~-----------~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~ 120 (626)
|.....+| .|.|+ |+-. ..+++.|+|++|++++.. +..+..+++|+.|+|++|++++..|..+.+
T Consensus 23 ~~~~~~~C--~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (353)
T 2z80_A 23 SNQASLSC--DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYIS-NSDLQRCVNLQALVLTSNGINTIEEDSFSS 98 (353)
T ss_dssp ----CCEE--CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEEC-TTTTTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred CCccCCCC--CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccC-HHHhccCCCCCEEECCCCccCccCHhhcCC
Confidence 34446678 58887 6532 136899999999999754 446889999999999999999988888999
Q ss_pred CCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCC--CccCcCCCcEEEcCCCc-ccccCCCC--CCCCccE
Q 006903 121 CKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP--DLSRISGLLTFFAENNQ-LRGGIPEF--DFSNLLQ 195 (626)
Q Consensus 121 l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p--~~~~~~~L~~l~l~~N~-l~g~ip~~--~~~~L~~ 195 (626)
+++|++|+|++|++++..+..+.++++|++|+|++|++++..+ .+..+++|+.|++++|+ +++..|.. .+++|+.
T Consensus 99 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~ 178 (353)
T 2z80_A 99 LGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEE 178 (353)
T ss_dssp CTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEE
T ss_pred CCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCE
Confidence 9999999999999996444448999999999999999997665 38899999999999995 55443432 5788999
Q ss_pred EEccCCcCCCCCCCCCCC
Q 006903 196 FNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 196 l~ls~N~l~g~ip~~~~~ 213 (626)
|++++|.+++.+|..+..
T Consensus 179 L~l~~n~l~~~~~~~l~~ 196 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKS 196 (353)
T ss_dssp EEEEETTCCEECTTTTTT
T ss_pred EECCCCCcCccCHHHHhc
Confidence 999999999887776543
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.62 E-value=5.8e-15 Score=144.71 Aligned_cols=135 Identities=19% Similarity=0.162 Sum_probs=116.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|+|++|++++..+ ..+..+++|+.|+|++|+|++..+..+..+++|++|+|++|+|++..|..+..+++|+.|+
T Consensus 40 ~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 118 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEP-GVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118 (229)
T ss_dssp TTCSEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEcCCCccCccCH-HHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEe
Confidence 579999999999998765 4788999999999999999865556679999999999999999977667789999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|+|+...+.+..+++|+.|++++|++++..+.. .+++|+.|++++|.+++..+
T Consensus 119 Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 119 MCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999999954345999999999999999999665542 57899999999999875543
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.8e-16 Score=179.76 Aligned_cols=179 Identities=24% Similarity=0.325 Sum_probs=114.4
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCcccEEecCCCCeEEEEEe------------------cCCCce
Q 006903 25 EEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVL------------------DGFNLS 86 (626)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~c~~~w~gv~c~~~~~~v~~l~L------------------~~~~l~ 86 (626)
.+.++++|++++.+..... ......|.....++. .|.+++++. ++++.|+| +.|.+.
T Consensus 130 ~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~s~--~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~ 204 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSK--TAKKQQPTGDSTPSG-TATNSAVST--PLTPKIELFANGKDEANQALLQHKKLSQYSID 204 (727)
T ss_dssp --CCCHHHHHHHHHHHHHH--TTC--------------------------------------------------------
T ss_pred cccchhhhhhhhhhccccc--CcccCCCcCCCCccc-cCCCceecC--CccceEEeeCCCCCcchhhHhhcCccCccccc
Confidence 3446778999988764211 112335544433443 587776654 33444444 333333
Q ss_pred e--------ccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcC
Q 006903 87 G--------ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158 (626)
Q Consensus 87 g--------~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l 158 (626)
+ .+++..+..+..|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .||..|++|++|++|||++|+|
T Consensus 205 ~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 205 EDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC
T ss_pred CccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC
Confidence 2 123345677889999999999998 78988999999999999999999 8999999999999999999999
Q ss_pred CccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCC
Q 006903 159 SSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 159 ~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
+ .+|. ++.+++|+.|+|++|.|+ .||.. .+++|+.|+|++|.|+|.+|..+.
T Consensus 283 ~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILT 337 (727)
T ss_dssp S-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHH
T ss_pred C-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHh
Confidence 9 5665 999999999999999997 77764 588999999999999999887653
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.4e-15 Score=140.05 Aligned_cols=112 Identities=21% Similarity=0.260 Sum_probs=98.3
Q ss_pred CCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEE
Q 006903 97 TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFF 175 (626)
Q Consensus 97 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~ 175 (626)
.++|+.|+|++|++++..+..+.++++|++|+|++|+|++..|..+..+++|++|+|++|+|++.++. +..+++|+.|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 27 PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 46899999999999987667789999999999999999976666689999999999999999988776 78999999999
Q ss_pred cCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 176 AENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 176 l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
+++|++++..+.. .+++|+.|++++|.+++..|
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999999655542 47899999999999998876
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-15 Score=169.13 Aligned_cols=140 Identities=19% Similarity=0.196 Sum_probs=127.5
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ ..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKS-YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEeCh-hhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 568999999999998765 4789999999999999999998899999999999999999999998899999999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccc-cCCCC--CCCCccEEEccCCcCCCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRG-GIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g-~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
|++|.+++..|. ++++++|++|++++|.+++ .+|.. .+++|+.|++++|++++..|..++.
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 175 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQF 175 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHH
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhh
Confidence 999999988765 9999999999999999986 67864 6899999999999999988876543
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.60 E-value=2.4e-15 Score=162.93 Aligned_cols=146 Identities=23% Similarity=0.223 Sum_probs=112.4
Q ss_pred CCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEe
Q 006903 59 CSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYV 129 (626)
Q Consensus 59 c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 129 (626)
|...|..|.|.... ..++.|+|++|++++..+ ..+..+++|+.|+|++|++++..|..|.++++|++|+|
T Consensus 52 C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 52 CSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQA-DTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp ECSSSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred ECCCCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECH-HHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 44457788886542 468999999999998665 47889999999999999999988889999999999999
Q ss_pred eccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCCC
Q 006903 130 GRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 130 ~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~g 205 (626)
++|+|++..+..+..+++|++|+|++|+|+...+. +.++++|+.|++++|+..+.+|.. .+++|+.|++++|++++
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 99999976666688999999999999999876654 666677777777665544455442 34555555555555553
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.60 E-value=4.5e-16 Score=175.88 Aligned_cols=139 Identities=18% Similarity=0.273 Sum_probs=124.9
Q ss_pred CeEEEEEecCCCceec-----------------cCccccC--CCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccc
Q 006903 73 KSVRKIVLDGFNLSGI-----------------LDTTSVC--KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK 133 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~-----------------~~~~~~~--~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 133 (626)
.+++.|+|++|.|+|. +|. .++ .+++|++|+|++|++.|.+|..|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~-~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE-DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCch-hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 5799999999999996 765 788 99999999999999999999999999999999999998
Q ss_pred -ccc-ccChhhhcC------CCCCeEEccCCcCCccCCC---ccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCC
Q 006903 134 -LSG-NLPDSLSKL------NNLKRLDISNNNFSSELPD---LSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNN 201 (626)
Q Consensus 134 -l~g-~ip~~~~~l------~~L~~L~ls~N~l~g~~p~---~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N 201 (626)
|+| .+|..++++ ++|++|+|++|+|+ .+|. +.++++|+.|++++|+++|.+|.+ .+++|+.|++++|
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYN 363 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCC
Confidence 999 999999887 99999999999999 6765 899999999999999999999943 3678888999999
Q ss_pred cCCCCCCCCCCCC
Q 006903 202 NLSGPVPGVNGRL 214 (626)
Q Consensus 202 ~l~g~ip~~~~~~ 214 (626)
.++ .+|..+..+
T Consensus 364 ~l~-~lp~~l~~l 375 (636)
T 4eco_A 364 QIT-EIPANFCGF 375 (636)
T ss_dssp EEE-ECCTTSEEE
T ss_pred ccc-cccHhhhhh
Confidence 888 778765443
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-15 Score=170.91 Aligned_cols=135 Identities=16% Similarity=0.148 Sum_probs=66.0
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCC-ccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVS-QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
+++.|+|++|.+.+. | ..+..+++|+.|+|++|.+.+..| ..+.++++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 377 ~L~~L~L~~n~l~~~-~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 454 (606)
T 3vq2_A 377 SLRHLDLSFNGAIIM-S-ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLK 454 (606)
T ss_dssp CCCEEECCSCSEEEE-C-CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred cccEeECCCCccccc-h-hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEE
Confidence 455566666655542 2 234445555555555555554444 3444555555555555555554454455555555555
Q ss_pred ccCCcCCcc-CCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCC
Q 006903 153 ISNNNFSSE-LPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGV 210 (626)
Q Consensus 153 ls~N~l~g~-~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~ 210 (626)
|++|.+++. +|. +..+++|+.|++++|++++.+|.. .+++|+.|++++|++++.+|..
T Consensus 455 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 516 (606)
T 3vq2_A 455 MAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSH 516 (606)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGG
T ss_pred CCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHH
Confidence 555555442 333 444455555555555555444432 3444444555555444444443
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-15 Score=168.45 Aligned_cols=139 Identities=29% Similarity=0.425 Sum_probs=114.7
Q ss_pred CCCCCCCCCCC---CcccE-EecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcE
Q 006903 51 GWNRSSDPCSG---KWVGV-TCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTH 126 (626)
Q Consensus 51 ~w~~~~~~c~~---~w~gv-~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 126 (626)
+|..+.++|.. .|.|+ .|.. .+++.|+|++|+|++ +|. .+ +++|+.|+|++|+|+ .+| ..+++|++
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~-~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPD-NL--PPQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCS-CC--CTTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCH-hH--cCCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 46666788865 49999 7865 469999999999998 654 34 378999999999999 688 45789999
Q ss_pred EEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCC
Q 006903 127 LYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 127 L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ 206 (626)
|+|++|+|++ ||. +.+ +|+.|+|++|+|++ +|. .+++|+.|++++|++++ +|. .+++|+.|++++|.|++
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L~~- 174 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE--LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQLTF- 174 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC--cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCCCC-
Confidence 9999999997 888 655 89999999999998 666 67889999999999987 776 67889999999999887
Q ss_pred CCC
Q 006903 207 VPG 209 (626)
Q Consensus 207 ip~ 209 (626)
+|.
T Consensus 175 lp~ 177 (571)
T 3cvr_A 175 LPE 177 (571)
T ss_dssp CCC
T ss_pred cch
Confidence 776
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-15 Score=155.60 Aligned_cols=146 Identities=16% Similarity=0.175 Sum_probs=78.6
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCccc--CC--ccccCCCCCcEEEeeccccccccCh---h-hhcC
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGT--VS--QEISNCKQLTHLYVGRNKLSGNLPD---S-LSKL 145 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~--~p--~~~~~l~~L~~L~l~~N~l~g~ip~---~-~~~l 145 (626)
+++.|+|++|++.+..+ ..+..+++|++|+|++|++.+. ++ ..+.++++|++|+|++|+++ .+|. . +..+
T Consensus 146 ~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 146 GLKVLSIAQAHSPAFSC-EQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp CCCEEEEECCSSCCCCT-TSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred CCCEEEeeCCCcchhhH-HHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 45556666666654433 2455566666666666665542 22 12245566666666666664 2222 1 3556
Q ss_pred CCCCeEEccCCcCCccCCC-ccCc---CCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC-CCCCCCCCCcccCCC
Q 006903 146 NNLKRLDISNNNFSSELPD-LSRI---SGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG-PVPGVNGRLGADSFS 220 (626)
Q Consensus 146 ~~L~~L~ls~N~l~g~~p~-~~~~---~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g-~ip~~~~~~~~~~~~ 220 (626)
++|++|||++|+|++.+|. +..+ ++|+.|++++|+++ .+|...+++|+.|++++|++++ +++..+.++....+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~ 302 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNRAPQPDELPEVDNLTLD 302 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCSCCCTTSCCCCSCEECS
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCCCchhhhCCCccEEECc
Confidence 6666666666666666443 4443 46666666666666 5555445666666666666665 333333333333444
Q ss_pred CC
Q 006903 221 GN 222 (626)
Q Consensus 221 gn 222 (626)
+|
T Consensus 303 ~N 304 (310)
T 4glp_A 303 GN 304 (310)
T ss_dssp ST
T ss_pred CC
Confidence 44
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.8e-15 Score=164.90 Aligned_cols=150 Identities=21% Similarity=0.224 Sum_probs=128.1
Q ss_pred CCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEe
Q 006903 59 CSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYV 129 (626)
Q Consensus 59 c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 129 (626)
|...|..|.|.... ..++.|+|++|++++..+ ..+..+++|+.|+|++|.+++..|..|.++++|++|+|
T Consensus 9 C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 87 (477)
T 2id5_A 9 CSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ-DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGL 87 (477)
T ss_dssp EETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred ECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECH-hHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEEC
Confidence 44457788886432 468899999999998665 47889999999999999999988999999999999999
Q ss_pred eccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCC
Q 006903 130 GRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 130 ~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ 206 (626)
++|++++..+..|.++++|++|+|++|.+++.+|. +..+++|+.|++++|.+++..|.. .+++|+.|++++|.+++.
T Consensus 88 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 88 RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp CSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC
T ss_pred CCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc
Confidence 99999965555689999999999999999998886 899999999999999999877653 578999999999999875
Q ss_pred CCC
Q 006903 207 VPG 209 (626)
Q Consensus 207 ip~ 209 (626)
.+.
T Consensus 168 ~~~ 170 (477)
T 2id5_A 168 PTE 170 (477)
T ss_dssp CHH
T ss_pred Chh
Confidence 543
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=3.8e-15 Score=161.16 Aligned_cols=134 Identities=19% Similarity=0.220 Sum_probs=76.1
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.|+|++|++.+.++. .+..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|++|||
T Consensus 276 ~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 276 GVKTCDLSKSKIFALLKS-VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp CCCEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred CceEEEecCccccccchh-hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 455555555555554432 4555556666666666666555555556666666666666665555555555666666666
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
++|++++.+|. +..+++|+.|++++|++++..+.. .+++|+.|++++|.+++.+|
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 66666555554 555566666666666665433321 35555666666666665555
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.7e-15 Score=149.61 Aligned_cols=139 Identities=19% Similarity=0.264 Sum_probs=121.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccc-cccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK-LSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~ip~~~~~l~~L~~L 151 (626)
..++.|+|++|++++..+ ..+..+++|+.|+|++|.+++..|..+.++++|++|+|++|. +++..|..+..+++|++|
T Consensus 32 ~~l~~L~l~~n~i~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPA-ASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCccCH-HHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 468999999999998654 468899999999999999999889999999999999999998 776668889999999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
+|++|.+++..|. +..+++|+.|++++|++++..+.. .+++|+.|++++|.+++..+..+.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 174 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 174 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhc
Confidence 9999999998776 889999999999999999766642 588999999999999876655444
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-15 Score=166.81 Aligned_cols=113 Identities=18% Similarity=0.103 Sum_probs=77.3
Q ss_pred CCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhh-cCCCCCeEEccCCcCCccCCCccCcCCCcEEE
Q 006903 97 TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLS-KLNNLKRLDISNNNFSSELPDLSRISGLLTFF 175 (626)
Q Consensus 97 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ 175 (626)
+++|+.|+|++|.+++..|..++++++|++|+|++|.|++.+|..+. .+++|+.|+|++|.|++. |....+++|+.|+
T Consensus 119 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~ 197 (487)
T 3oja_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLD 197 (487)
T ss_dssp CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEE
T ss_pred cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccccCCCCCEEE
Confidence 45677777777777776666777777777777777777776666665 677777777777777765 3344567777777
Q ss_pred cCCCcccccCCCC-CCCCccEEEccCCcCCCCCCCCC
Q 006903 176 AENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 176 l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
+++|.+++..|.+ .+++|+.|++++|.|++ +|..+
T Consensus 198 Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l 233 (487)
T 3oja_A 198 LSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKAL 233 (487)
T ss_dssp CCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred CCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhh
Confidence 7777777655543 46677777777777775 55443
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.9e-15 Score=139.21 Aligned_cols=129 Identities=20% Similarity=0.227 Sum_probs=115.2
Q ss_pred CeEEEEEecCCCce-eccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLS-GILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~-g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|+++ |.+|. .+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 56899999999998 77875 578899999999999999976 789999999999999999998899989899999999
Q ss_pred EccCCcCCccC--CCccCcCCCcEEEcCCCcccccCC----C-CCCCCccEEEccCCcCC
Q 006903 152 DISNNNFSSEL--PDLSRISGLLTFFAENNQLRGGIP----E-FDFSNLLQFNVSNNNLS 204 (626)
Q Consensus 152 ~ls~N~l~g~~--p~~~~~~~L~~l~l~~N~l~g~ip----~-~~~~~L~~l~ls~N~l~ 204 (626)
+|++|++++.. +.+..+++|+.|++++|.+++..+ . ..+++|+.|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 99999999854 458999999999999999997665 2 25899999999999875
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=9.9e-16 Score=178.82 Aligned_cols=134 Identities=24% Similarity=0.283 Sum_probs=114.2
Q ss_pred cCCCCCccEEEcccCCCcccCCc-cccCCCCCcEEEeeccccc-----cccChhhhcCCCCCeEEccCCcCCccCCC-cc
Q 006903 94 VCKTQSLVVLSLEENNIAGTVSQ-EISNCKQLTHLYVGRNKLS-----GNLPDSLSKLNNLKRLDISNNNFSSELPD-LS 166 (626)
Q Consensus 94 ~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~-----g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~ 166 (626)
++.+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|..+++|+.|||++|+|++.+|. +.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 34788899999999999875443 3567889999999999997 45566788999999999999999998887 89
Q ss_pred CcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCCCCCCCcccCCCCCCCCCC
Q 006903 167 RISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCG 227 (626)
Q Consensus 167 ~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~gn~~lcg 227 (626)
.+++|+.|++++|++++..|....++|+.|++++|+|+|.+|..+..+....+.||+..|.
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICE 562 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCS
T ss_pred chhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccc
Confidence 9999999999999999876665458999999999999999999887777777788887773
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.1e-15 Score=174.45 Aligned_cols=147 Identities=16% Similarity=0.239 Sum_probs=128.7
Q ss_pred CeEEEEEecCCCcee-----------------ccCccccC--CCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccc
Q 006903 73 KSVRKIVLDGFNLSG-----------------ILDTTSVC--KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK 133 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g-----------------~~~~~~~~--~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 133 (626)
.+++.|+|++|.|+| .+|. .++ .+++|+.|+|++|++.|.+|..|+++++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 579999999999999 4765 677 99999999999999999999999999999999999998
Q ss_pred -ccc-ccChhhhcCC-------CCCeEEccCCcCCccCCC---ccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccC
Q 006903 134 -LSG-NLPDSLSKLN-------NLKRLDISNNNFSSELPD---LSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSN 200 (626)
Q Consensus 134 -l~g-~ip~~~~~l~-------~L~~L~ls~N~l~g~~p~---~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~ 200 (626)
|+| .+|..+++++ +|+.|+|++|+|+ .+|. +.++++|+.|++++|+++ .+|.+ .+++|+.|++++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 999 9999888776 9999999999999 6776 899999999999999999 88854 478999999999
Q ss_pred CcCCCCCCCCCCCCcc----cCCCCCC
Q 006903 201 NNLSGPVPGVNGRLGA----DSFSGNP 223 (626)
Q Consensus 201 N~l~g~ip~~~~~~~~----~~~~gn~ 223 (626)
|.++ .+|..+..+.. ..+.+|.
T Consensus 605 N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 630 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTDQVEGLGFSHNK 630 (876)
T ss_dssp SCCS-CCCTTSCEECTTCCEEECCSSC
T ss_pred Cccc-cchHHHhhccccCCEEECcCCC
Confidence 9999 88877654433 3445553
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.4e-15 Score=141.30 Aligned_cols=126 Identities=17% Similarity=0.217 Sum_probs=63.7
Q ss_pred EEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEcc
Q 006903 75 VRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDIS 154 (626)
Q Consensus 75 v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls 154 (626)
++.|+|++|++. .++ .+..+++|+.|+|++|.++ .++.+..+++|++|+|++|++++..|..++.+++|++|+|+
T Consensus 46 L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 46 LTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp CCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred ccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 445555555554 222 2445555555555555433 22345555555555555555555455555555555555555
Q ss_pred CCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCC
Q 006903 155 NNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 155 ~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g 205 (626)
+|.+++..|. +..+++|+.|++++|.+.+.+|.. .+++|+.|++++|.+++
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCC
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcC
Confidence 5555554433 555555555555555533334332 34555555555555544
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=146.62 Aligned_cols=112 Identities=21% Similarity=0.247 Sum_probs=67.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ ..+..+++|+.|+|++|.+++..|..+.++++|++|+|++|++++..+..+.++++|++|+
T Consensus 52 ~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIED-GAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp TTCSEEECTTCCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred cCCcEEECCCCcCCccCH-HHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 346666666666665432 2455666666666666666665555666666666666666666654444566666666666
Q ss_pred ccCCcCCc-cCCC-ccCcCCCcEEEcCCCcccccC
Q 006903 153 ISNNNFSS-ELPD-LSRISGLLTFFAENNQLRGGI 185 (626)
Q Consensus 153 ls~N~l~g-~~p~-~~~~~~L~~l~l~~N~l~g~i 185 (626)
|++|.+++ .+|. +..+++|+.|++++|++++..
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~ 165 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCC
Confidence 66666655 2343 556666666666666665543
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.6e-15 Score=136.55 Aligned_cols=125 Identities=20% Similarity=0.226 Sum_probs=109.6
Q ss_pred CeEEEEEecCCCce-eccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLS-GILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~-g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|+++ |.+|. .+..+++|+.|+|++|.+++. ..+.++++|++|+|++|++++.+|..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 46889999999998 77875 678999999999999999976 779999999999999999998899988899999999
Q ss_pred EccCCcCCccC--CCccCcCCCcEEEcCCCcccccCC---C--CCCCCccEEEccC
Q 006903 152 DISNNNFSSEL--PDLSRISGLLTFFAENNQLRGGIP---E--FDFSNLLQFNVSN 200 (626)
Q Consensus 152 ~ls~N~l~g~~--p~~~~~~~L~~l~l~~N~l~g~ip---~--~~~~~L~~l~ls~ 200 (626)
+|++|.+++.. +.+..+++|+.|++++|.+++..+ . ..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999843 458999999999999999998765 1 2588999998763
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.57 E-value=4.2e-15 Score=166.80 Aligned_cols=172 Identities=16% Similarity=0.125 Sum_probs=131.1
Q ss_pred CCCCCCCCCCCCC--CcccEEecCC----------------CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCC
Q 006903 49 NWGWNRSSDPCSG--KWVGVTCDSR----------------QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNI 110 (626)
Q Consensus 49 ~~~w~~~~~~c~~--~w~gv~c~~~----------------~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l 110 (626)
..+|....++|.. .|.++.|+.. ...++.++++++.+.+ +|+..+..+++|+.|+|++|.+
T Consensus 9 l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~-lp~~~~~~l~~L~~L~L~~n~l 87 (597)
T 3oja_B 9 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQI 87 (597)
T ss_dssp --CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESE-ECTHHHHHCCCCSEEECTTSCC
T ss_pred ccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCC-cCHHHHccCCCCcEEECCCCCC
Confidence 4567665566632 2766665411 0346778888888765 4444567889999999999999
Q ss_pred cccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC-
Q 006903 111 AGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF- 188 (626)
Q Consensus 111 ~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~- 188 (626)
++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|.|++.+|. +..+++|+.|++++|.+++..|..
T Consensus 88 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 167 (597)
T 3oja_B 88 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167 (597)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred CCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh
Confidence 988888999999999999999999988888889999999999999999977766 689999999999999999887753
Q ss_pred -CCCCccEEEccCCcCCCCCCCCCCCCcccCCCC
Q 006903 189 -DFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSG 221 (626)
Q Consensus 189 -~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~g 221 (626)
.+++|+.|++++|.+++..+..+..+....+.+
T Consensus 168 ~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~ 201 (597)
T 3oja_B 168 QATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSY 201 (597)
T ss_dssp TTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCS
T ss_pred hcCCcCcEEECcCCCCCCcChhhhhhhhhhhccc
Confidence 588999999999999876444333333333333
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.56 E-value=7.5e-15 Score=150.88 Aligned_cols=147 Identities=20% Similarity=0.178 Sum_probs=108.8
Q ss_pred CeEEEEEecCCCceeccCccccCCC-----CCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccc--cChhh--h
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKT-----QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN--LPDSL--S 143 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l-----~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~--ip~~~--~ 143 (626)
.+++.|+|++|++++. | ..+..+ ++|++|+|++|++++..|..++++++|++|+|++|++.|. +|..+ .
T Consensus 121 ~~L~~L~Ls~N~l~~~-~-~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-D-AWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CCCSEEEEESCBCSSS-S-SHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCccEEEccCCCCcch-h-HHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 5688888998888876 4 344444 7888888888888887778888888888888888888776 34555 7
Q ss_pred cCCCCCeEEccCCcCCc--cCCC--ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCCCCCCCCCC-CCc
Q 006903 144 KLNNLKRLDISNNNFSS--ELPD--LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLSGPVPGVNG-RLG 215 (626)
Q Consensus 144 ~l~~L~~L~ls~N~l~g--~~p~--~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~g~ip~~~~-~~~ 215 (626)
.+++|++|+|++|+|++ .++. +..+++|+.|++++|++++.+|.. .+++|+.|++++|.|+ .+|..+. ++.
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~ 277 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLS 277 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSEEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCCce
Confidence 88888888888888884 2332 456788888888888888877532 3578888888888887 7776654 233
Q ss_pred ccCCCCC
Q 006903 216 ADSFSGN 222 (626)
Q Consensus 216 ~~~~~gn 222 (626)
...+.+|
T Consensus 278 ~L~Ls~N 284 (312)
T 1wwl_A 278 VLDLSYN 284 (312)
T ss_dssp EEECCSS
T ss_pred EEECCCC
Confidence 3334444
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.9e-14 Score=155.31 Aligned_cols=148 Identities=24% Similarity=0.251 Sum_probs=116.5
Q ss_pred CCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEe
Q 006903 59 CSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYV 129 (626)
Q Consensus 59 c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 129 (626)
|...|..|.|.... ..++.|+|++|++.+..+ ..+..+++|+.|+|++|++++..|..|.++++|++|+|
T Consensus 41 C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 41 CSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKV-NSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp ECTTSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECT-TTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred eCCCCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCH-HHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 44457788886531 457889999999988664 47889999999999999999887788999999999999
Q ss_pred eccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCCC
Q 006903 130 GRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 130 ~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~g 205 (626)
++|+|++..+..|..+++|++|+|++|.++...+. +.++++|+.|++++|+..+.+|.. .+++|+.|++++|+++
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~- 198 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR- 198 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-
Confidence 99999866556788999999999999999877664 777888888888876665566653 3667777777777776
Q ss_pred CCC
Q 006903 206 PVP 208 (626)
Q Consensus 206 ~ip 208 (626)
.+|
T Consensus 199 ~~~ 201 (440)
T 3zyj_A 199 EIP 201 (440)
T ss_dssp SCC
T ss_pred ccc
Confidence 344
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=4.8e-15 Score=166.50 Aligned_cols=150 Identities=18% Similarity=0.115 Sum_probs=130.5
Q ss_pred cccEEecCC---------CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccc
Q 006903 63 WVGVTCDSR---------QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK 133 (626)
Q Consensus 63 w~gv~c~~~---------~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 133 (626)
+..|.|... ...++.|+|++|++++..| ..+..+++|++|+|++|++.+..|..|.++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQN-TTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECT-TTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCCh-hHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 445777543 2468999999999998765 478999999999999999999889999999999999999999
Q ss_pred cccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccc-cCCCC-CCCCccEEEccCCcCCCCCCCC
Q 006903 134 LSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRG-GIPEF-DFSNLLQFNVSNNNLSGPVPGV 210 (626)
Q Consensus 134 l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g-~ip~~-~~~~L~~l~ls~N~l~g~ip~~ 210 (626)
+++..|..|+++++|++|+|++|.+++..|. +.++++|++|++++|++++ .+|.. .+++|+.|++++|.+++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 9999999999999999999999999997554 8999999999999999998 44554 5889999999999999877755
Q ss_pred CCC
Q 006903 211 NGR 213 (626)
Q Consensus 211 ~~~ 213 (626)
++.
T Consensus 173 ~~~ 175 (606)
T 3t6q_A 173 MSS 175 (606)
T ss_dssp HHT
T ss_pred hhh
Confidence 443
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.55 E-value=2.4e-14 Score=145.58 Aligned_cols=150 Identities=23% Similarity=0.237 Sum_probs=124.1
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ ...+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|++..|..|..+++|++|+
T Consensus 55 ~~L~~L~L~~n~l~~~~~---~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQV---DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp TTCCEEECTTSCCCEEEC---CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCcccC---CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 578999999999987543 378899999999999998 6888899999999999999999977778899999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCC---CcccCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR---LGADSFSGNPGLC 226 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~---~~~~~~~gn~~lc 226 (626)
|++|+|++..|. +..+++|+.|++++|++++..+.. .+++|+.|++++|+|+ .+|..+.. +....+.||+..|
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 999999987776 788999999999999999544432 4789999999999998 67765443 2333456777655
Q ss_pred C
Q 006903 227 G 227 (626)
Q Consensus 227 g 227 (626)
.
T Consensus 210 ~ 210 (290)
T 1p9a_G 210 N 210 (290)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-14 Score=148.59 Aligned_cols=154 Identities=16% Similarity=0.174 Sum_probs=134.3
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecccccc-ccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSG-NLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|++.+..+...+..+++|+.|+|++|.+.+..|..+.++++|++|+|++|.+++ .+|..+..+++|++|
T Consensus 101 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 101 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 5789999999999987654568899999999999999999999999999999999999999997 689999999999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCCc----ccCCCCCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRLG----ADSFSGNPG 224 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~~----~~~~~gn~~ 224 (626)
+|++|++++..|. +..+++|+.|++++|++++..+.. .+++|+.|++++|.+++.+|..+..++ ...+.+|+-
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~ 260 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCE
T ss_pred ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCe
Confidence 9999999998886 899999999999999999765532 578999999999999999998766543 345667765
Q ss_pred CC
Q 006903 225 LC 226 (626)
Q Consensus 225 lc 226 (626)
.|
T Consensus 261 ~~ 262 (306)
T 2z66_A 261 AC 262 (306)
T ss_dssp EC
T ss_pred ec
Confidence 44
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=1e-14 Score=170.33 Aligned_cols=147 Identities=17% Similarity=0.137 Sum_probs=121.9
Q ss_pred CcccEEecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccC-CccccCCCCCcEEEeeccccccccCh
Q 006903 62 KWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTV-SQEISNCKQLTHLYVGRNKLSGNLPD 140 (626)
Q Consensus 62 ~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~g~ip~ 140 (626)
+|..|.+ ...+++.|+|++|.+++..+ ..+..+++|++|+|++|++.+.+ |..|.++++|++|+|++|++++..|.
T Consensus 15 ~L~~vP~--lp~~l~~LdLs~N~i~~i~~-~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 15 NLTQVPQ--VLNTTERLLLSFNYIRTVTA-SSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CSSCCCS--SCTTCCEEEEESCCCCEECS-SSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCC--CCCCcCEEECCCCcCCccCh-hHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 3666665 23578899999999988765 47888999999999999888777 67789999999999999999988888
Q ss_pred hhhcCCCCCeEEccCCcCCccCCC---ccCcCCCcEEEcCCCcccccCCC---CCCCCccEEEccCCcCCCCCCCCC
Q 006903 141 SLSKLNNLKRLDISNNNFSSELPD---LSRISGLLTFFAENNQLRGGIPE---FDFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 141 ~~~~l~~L~~L~ls~N~l~g~~p~---~~~~~~L~~l~l~~N~l~g~ip~---~~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
.|+++++|++|+|++|.+++.+|. +.++++|+.|++++|.+++..|. ..+++|+.|++++|.+++..|..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 999999999999999999987654 88899999999999999887653 258888999999998888877654
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.4e-14 Score=142.68 Aligned_cols=135 Identities=21% Similarity=0.255 Sum_probs=115.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCC-CcccCCccccCCCCCcEEEeec-cccccccChhhhcCCCCCe
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENN-IAGTVSQEISNCKQLTHLYVGR-NKLSGNLPDSLSKLNNLKR 150 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l~~L~~L~l~~-N~l~g~ip~~~~~l~~L~~ 150 (626)
..++.|+|++|++++..+ ..+..+++|+.|+|++|. +++..+..+.++++|++|+|++ |++++..|..|..+++|++
T Consensus 31 ~~l~~L~l~~n~l~~i~~-~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPS-HAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCSEECT-TTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcceEECH-HHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 468999999999997654 468899999999999997 8866666899999999999999 9999766678899999999
Q ss_pred EEccCCcCCccCCCccCcCCCc---EEEcCCC-cccccCCC-C-CCCCcc-EEEccCCcCCCCCCCC
Q 006903 151 LDISNNNFSSELPDLSRISGLL---TFFAENN-QLRGGIPE-F-DFSNLL-QFNVSNNNLSGPVPGV 210 (626)
Q Consensus 151 L~ls~N~l~g~~p~~~~~~~L~---~l~l~~N-~l~g~ip~-~-~~~~L~-~l~ls~N~l~g~ip~~ 210 (626)
|+|++|.+++ +|.+..+++|+ .|++++| ++++..+. + .+++|+ .|++++|.++ .+|..
T Consensus 110 L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 110 LGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174 (239)
T ss_dssp EEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT
T ss_pred EeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh
Confidence 9999999998 67788888888 9999999 88865554 2 578899 9999999998 67654
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=4.2e-14 Score=134.70 Aligned_cols=124 Identities=23% Similarity=0.284 Sum_probs=107.3
Q ss_pred EEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCC
Q 006903 77 KIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156 (626)
Q Consensus 77 ~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N 156 (626)
.+++++++|.. +|. .+ .++|+.|+|++|+|+ .+|..+.++++|+.|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~l~~~~~~l~~-ip~-~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPK-GI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCSS-CCS-CC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCCc-CCC-CC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46788888873 443 22 368999999999998 78899999999999999999999887888999999999999999
Q ss_pred cCCccCCC-ccCcCCCcEEEcCCCcccccCCC-C-CCCCccEEEccCCcCCC
Q 006903 157 NFSSELPD-LSRISGLLTFFAENNQLRGGIPE-F-DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 157 ~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~-~-~~~~L~~l~ls~N~l~g 205 (626)
+|++..|. +..+++|+.|++++|++++..+. + .+++|+.|++++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99998886 99999999999999999965553 2 47899999999998864
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.7e-15 Score=153.21 Aligned_cols=136 Identities=16% Similarity=0.204 Sum_probs=115.7
Q ss_pred CeEEEEEecCCCceeccCcccc-CCCCCccEEEcccCCCcccCCccccCC-----CCCcEEEeeccccccccChhhhcCC
Q 006903 73 KSVRKIVLDGFNLSGILDTTSV-CKTQSLVVLSLEENNIAGTVSQEISNC-----KQLTHLYVGRNKLSGNLPDSLSKLN 146 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~-~~l~~L~~L~ls~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~ip~~~~~l~ 146 (626)
.+++.|+|++|+++|.+|...+ ..+++|+.|+|++|++++. |..++.+ ++|++|+|++|++++..|..+++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 5789999999999998876322 7899999999999999987 8888777 8999999999999988889999999
Q ss_pred CCCeEEccCCcCCccC--C-Cc--cCcCCCcEEEcCCCcccc--cCCCC---CCCCccEEEccCCcCCCCCCC
Q 006903 147 NLKRLDISNNNFSSEL--P-DL--SRISGLLTFFAENNQLRG--GIPEF---DFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 147 ~L~~L~ls~N~l~g~~--p-~~--~~~~~L~~l~l~~N~l~g--~ip~~---~~~~L~~l~ls~N~l~g~ip~ 209 (626)
+|++|||++|+++|.+ | .+ ..+++|+.|++++|++++ .++.. .+++|+.|++++|.+++.+|.
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 246 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGA 246 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccch
Confidence 9999999999998863 2 34 889999999999999984 33322 468999999999999998763
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.3e-14 Score=162.81 Aligned_cols=142 Identities=15% Similarity=0.151 Sum_probs=109.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCcc-ccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQE-ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|.+.+..+ ..+..+++|+.|+|++|.+.+..|.. +.++++|+.|+|++|.+++..|..+..+++|++|
T Consensus 376 ~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKT-EAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCEEECT-TTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCcCCH-HHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 567888888888887665 36777888888888888888776654 7788888888888888888778888888888888
Q ss_pred EccCCcCCcc-CC--C-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCCc
Q 006903 152 DISNNNFSSE-LP--D-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRLG 215 (626)
Q Consensus 152 ~ls~N~l~g~-~p--~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~~ 215 (626)
+|++|++++. +| . +..+++|+.|++++|++++.+|.. .+++|+.|++++|++++.+|..+..+.
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 524 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLK 524 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCC
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccc
Confidence 8888888763 22 2 777888888888888888777653 577888888888888887776655433
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.4e-14 Score=138.37 Aligned_cols=130 Identities=13% Similarity=0.235 Sum_probs=113.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+... +.+..+++|+.|+|++|.+++..|..++.+++|++|+|++|++++..|..++.+++|+.|+
T Consensus 66 ~~L~~L~l~~n~~~~~---~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHATNY---NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCSCC---GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCCcc---hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 4689999999976532 3688899999999999999998899999999999999999999998999999999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g 205 (626)
|++|.+.+.+|.+..+++|+.|++++|++++..+-..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAITDIMPLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCCCCGGGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCccccHhhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99999666678899999999999999999974433468999999999999864
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-14 Score=153.73 Aligned_cols=134 Identities=17% Similarity=0.203 Sum_probs=115.3
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|+++++.+.. +|+..+..+++|+.|+|++|.+++..|..+.++++|++|+|++|++++..|..++++++|++|+
T Consensus 45 ~~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchhh-CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 457788999888775 4444567889999999999999987778899999999999999999988888899999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPV 207 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~i 207 (626)
|++|.++...+. +.++++|++|++++|.+++..|.. .+++|+.|++++|.+++.-
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 181 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD 181 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc
Confidence 999999966555 688999999999999999877653 5889999999999998653
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.8e-14 Score=164.15 Aligned_cols=136 Identities=18% Similarity=0.179 Sum_probs=111.5
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ ..+..+++|++|+|++|.+++..|..++++++|++|+|++|++++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPA-ANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCCG-GGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcCH-HHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 468889999999887543 4678888899999999999888888888899999999999988854444688889999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~ 209 (626)
|++|++++..|. +.++++|++|++++|.+++..|.. .+++|+.|++++|.+++..|.
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 999998877765 888888999999999888877653 577888888888888876664
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-14 Score=158.24 Aligned_cols=135 Identities=19% Similarity=0.296 Sum_probs=109.5
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecccccc--ccChhhhcCCCCCeE
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSG--NLPDSLSKLNNLKRL 151 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~ip~~~~~l~~L~~L 151 (626)
+++.|++++|++.+.. ....+++|+.|+|++|.+++.+|..++++++|++|+|++|++++ .+|..+..+++|++|
T Consensus 303 ~L~~L~l~~n~l~~~~---~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L 379 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML---CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQL 379 (520)
T ss_dssp CCSEEEEESSCCCCCC---CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEE
T ss_pred ceeEEEcCCCcccccc---chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEE
Confidence 5788888888876532 12577888899999999998888888889999999999999886 677788889999999
Q ss_pred EccCCcCCccCCC--ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCCCCC
Q 006903 152 DISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 152 ~ls~N~l~g~~p~--~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
||++|.+++.+|. +..+++|+.|++++|++++.+|....++|+.|++++|+++ .+|..+.
T Consensus 380 ~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~ 441 (520)
T 2z7x_B 380 DISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVV 441 (520)
T ss_dssp ECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGG
T ss_pred ECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhh
Confidence 9999999886663 7778888999999998888877654478888888888888 7776543
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.4e-14 Score=159.28 Aligned_cols=153 Identities=20% Similarity=0.244 Sum_probs=130.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCC-ccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVS-QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|.+.+..+ .+..+++|+.|+|++|.+.+..| ..+.++++|++|+|++|.+++.+|..+.++++|+.|
T Consensus 373 ~~L~~L~l~~n~l~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 373 TSLKYLDLSFNGVITMSS--NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp SCCCEEECCSCSEEEEEE--EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CccCEEECCCCccccccc--cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 578999999999988653 38889999999999999998777 568899999999999999999999999999999999
Q ss_pred EccCCcCC-ccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCC---cccCCCCCCC
Q 006903 152 DISNNNFS-SELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRL---GADSFSGNPG 224 (626)
Q Consensus 152 ~ls~N~l~-g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~---~~~~~~gn~~ 224 (626)
+|++|.++ +.+|. +..+++|+.|++++|++++.+|.. .+++|+.|++++|++++.+|..+..+ ....+.+|+-
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 530 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcc
Confidence 99999998 67776 899999999999999999887764 58899999999999999888766543 3345667765
Q ss_pred CCC
Q 006903 225 LCG 227 (626)
Q Consensus 225 lcg 227 (626)
.|.
T Consensus 531 ~~~ 533 (570)
T 2z63_A 531 DCS 533 (570)
T ss_dssp CCC
T ss_pred cCC
Confidence 553
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=4e-14 Score=134.81 Aligned_cols=125 Identities=23% Similarity=0.360 Sum_probs=109.3
Q ss_pred CCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEE
Q 006903 58 PCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLY 128 (626)
Q Consensus 58 ~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 128 (626)
.|...|..|.|..+. ..++.|+|++|+++ .+| ..+..+++|+.|+|++|+|++..|..|.++++|++|+
T Consensus 7 ~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip-~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ 84 (193)
T 2wfh_A 7 ECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLI 84 (193)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhH-HHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEE
Confidence 343357778886532 46899999999998 565 4789999999999999999998888899999999999
Q ss_pred eeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCccccc
Q 006903 129 VGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGG 184 (626)
Q Consensus 129 l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ 184 (626)
|++|+|++..|..|..+++|+.|+|++|+|++..+. +..+++|+.|++++|.+...
T Consensus 85 Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 85 LSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 999999988888899999999999999999987775 88999999999999999864
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.51 E-value=7.8e-15 Score=160.31 Aligned_cols=146 Identities=21% Similarity=0.244 Sum_probs=123.9
Q ss_pred CcccEEecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCcccc-CCCCCcEEEeeccccccccCh
Q 006903 62 KWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEIS-NCKQLTHLYVGRNKLSGNLPD 140 (626)
Q Consensus 62 ~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~ip~ 140 (626)
.+.++.|.. ...++.|+|++|+|++..|. .++.+++|+.|+|++|.+++.+|..+. ++++|+.|+|++|.|++..+
T Consensus 110 ~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~- 186 (487)
T 3oja_A 110 NISRVSCSR-GQGKKNIYLANNKITMLRDL-DEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG- 186 (487)
T ss_dssp CCCCEEECC-CSSCEEEECCSSCCCSGGGB-CGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC-
T ss_pred cCCCCCccc-cCCCCEEECCCCCCCCCCch-hhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc-
Confidence 355666643 35789999999999987764 678899999999999999999998886 89999999999999997633
Q ss_pred hhhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCC-CCCCCCCC
Q 006903 141 SLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLS-GPVPGVNG 212 (626)
Q Consensus 141 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~-g~ip~~~~ 212 (626)
+..+++|+.|||++|.|++.+|.+..+++|+.|++++|.+++ +|.. .+++|+.|++++|.++ +.+|..+.
T Consensus 187 -~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 187 -QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp -CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred -cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 446999999999999999988889999999999999999997 5543 4789999999999997 66665443
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.50 E-value=5e-14 Score=156.84 Aligned_cols=134 Identities=19% Similarity=0.267 Sum_probs=86.4
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecccccc--ccChhhhcCCCCCeE
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSG--NLPDSLSKLNNLKRL 151 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~ip~~~~~l~~L~~L 151 (626)
+++.|++++|++.... ....+++|+.|+|++|.+++.+|..++++++|++|+|++|++++ .+|..+.++++|++|
T Consensus 332 ~L~~L~l~~n~~~~~~---~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L 408 (562)
T 3a79_B 332 NIKMLSISDTPFIHMV---CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETL 408 (562)
T ss_dssp CCSEEEEESSCCCCCC---CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEE
T ss_pred cceEEEccCCCccccc---CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEE
Confidence 3666777777664321 11456667777777777777667777777777777777777765 344556677777777
Q ss_pred EccCCcCCccCCC--ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCCCC
Q 006903 152 DISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 152 ~ls~N~l~g~~p~--~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
+|++|++++.+|. +..+++|+.|++++|++++.+|....++|+.|++++|+++ .||..+
T Consensus 409 ~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~ 469 (562)
T 3a79_B 409 DVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDV 469 (562)
T ss_dssp ECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTT
T ss_pred ECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhh
Confidence 7777777765553 5666677777777777766666533356777777777666 555544
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.50 E-value=6.3e-14 Score=156.02 Aligned_cols=93 Identities=22% Similarity=0.192 Sum_probs=50.8
Q ss_pred cCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccC--CC-ccCcCCCcEEEcCCCcccccCCCC---CCCC
Q 006903 119 SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSEL--PD-LSRISGLLTFFAENNQLRGGIPEF---DFSN 192 (626)
Q Consensus 119 ~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~--p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~ 192 (626)
..+++|++|+|++|++++.+|..++++++|+.|+|++|++++.. |. +..+++|+.|++++|++++.+|.. .+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 44555555555555555555555555555555555555555422 22 455555555555555555545542 2455
Q ss_pred ccEEEccCCcCCCCCCCCC
Q 006903 193 LLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 193 L~~l~ls~N~l~g~ip~~~ 211 (626)
|+.|++++|.++|.+|..+
T Consensus 430 L~~L~l~~n~l~~~~~~~l 448 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCL 448 (562)
T ss_dssp CCEEECCSSCCCGGGGSSC
T ss_pred CCEEECCCCCCCcchhhhh
Confidence 5555555555555555443
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.2e-13 Score=142.96 Aligned_cols=144 Identities=22% Similarity=0.294 Sum_probs=116.4
Q ss_pred CcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecc
Q 006903 62 KWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132 (626)
Q Consensus 62 ~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 132 (626)
.|..+.|.... ..++.|+|++|++.+..+ ..+..+++|+.|+|++|++++..|..+.++++|++|+|++|
T Consensus 34 ~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRK-DDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred cCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCH-hHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 68888886432 368899999999987654 46889999999999999999888889999999999999999
Q ss_pred ccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccc--cCCCC-CCCCccEEEccCCcCCCCCC
Q 006903 133 KLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRG--GIPEF-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 133 ~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g--~ip~~-~~~~L~~l~ls~N~l~g~ip 208 (626)
+++ .+|..+. ++|++|+|++|.+++..+. +..+++|+.|++++|.++. ..|.. ...+|+.|++++|.+++ +|
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~-l~ 188 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG-IP 188 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS-CC
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc-cC
Confidence 998 6787665 8899999999999877665 8889999999999999863 44432 11278888888888876 55
Q ss_pred CC
Q 006903 209 GV 210 (626)
Q Consensus 209 ~~ 210 (626)
..
T Consensus 189 ~~ 190 (332)
T 2ft3_A 189 KD 190 (332)
T ss_dssp SS
T ss_pred cc
Confidence 43
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-13 Score=143.21 Aligned_cols=147 Identities=18% Similarity=0.312 Sum_probs=115.0
Q ss_pred CCCCCcccEEecCC---------CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEE
Q 006903 58 PCSGKWVGVTCDSR---------QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLY 128 (626)
Q Consensus 58 ~c~~~w~gv~c~~~---------~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 128 (626)
.|...|..+.|... ...++.|+|++|++++..+ ..+..+++|++|+|++|++++..|..+.++++|++|+
T Consensus 28 ~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 28 RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKD-GDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp TCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCT-TTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeCh-hhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 34336888998643 1467889999999997654 4688999999999999999998899999999999999
Q ss_pred eeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccc--cCCCC--CCCCccEEEccCCcC
Q 006903 129 VGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRG--GIPEF--DFSNLLQFNVSNNNL 203 (626)
Q Consensus 129 l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g--~ip~~--~~~~L~~l~ls~N~l 203 (626)
|++|+++ .+|..+. ++|+.|++++|.+++..+. +..+++|+.|++++|.++. ..|.. .+++|+.|++++|.+
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999998 6776654 7888888888888876665 7778888888888888853 33432 467788888888887
Q ss_pred CCCCCC
Q 006903 204 SGPVPG 209 (626)
Q Consensus 204 ~g~ip~ 209 (626)
+. +|.
T Consensus 184 ~~-l~~ 188 (330)
T 1xku_A 184 TT-IPQ 188 (330)
T ss_dssp CS-CCS
T ss_pred cc-CCc
Confidence 64 443
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.50 E-value=4e-15 Score=170.22 Aligned_cols=138 Identities=22% Similarity=0.259 Sum_probs=118.7
Q ss_pred CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 72 QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 72 ~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
...++.|+|++|.+. .+|. .++.+++|+.|+|++|.|+ .+|..|++|++|++|+|++|+|+ .||..|+.|++|++|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISA-NIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCG-GGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred CCCCcEEECCCCCCC-CCCh-hhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 357899999999998 5654 6779999999999999999 89999999999999999999999 899999999999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCC--C-CCccEEEccCCcCCCCCCCCCCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFD--F-SNLLQFNVSNNNLSGPVPGVNGRL 214 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~--~-~~L~~l~ls~N~l~g~ip~~~~~~ 214 (626)
+|++|.|+ .+|. ++.+++|+.|+|++|.|+|.+|... + ..+..+++++|.++|.+|..+..+
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l 364 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFI 364 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccccee
Confidence 99999998 5565 9999999999999999999988642 1 122347899999999999876543
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-13 Score=149.92 Aligned_cols=138 Identities=20% Similarity=0.189 Sum_probs=99.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChh-----------
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDS----------- 141 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~----------- 141 (626)
.+++.|+|++|++++..+ ..+..+++|+.|+|++|++++..+..+.++++|++|+|++|++++..+..
T Consensus 99 ~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIEV-GAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp TTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCCcCh-hhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 468888888888887654 46778888888888888888766666788888888888888877433323
Q ss_pred --------------hhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCC
Q 006903 142 --------------LSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 142 --------------~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g 205 (626)
+.++++|++|+|++|++++ +|.+..+++|+.|++++|++++..|.. .+++|+.|++++|++++
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCcccc-cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 4455666666666666664 355666777777777777777766643 46778888888888877
Q ss_pred CCCCCCC
Q 006903 206 PVPGVNG 212 (626)
Q Consensus 206 ~ip~~~~ 212 (626)
..|..+.
T Consensus 257 ~~~~~~~ 263 (452)
T 3zyi_A 257 IERNAFD 263 (452)
T ss_dssp ECTTTTT
T ss_pred ECHHHhc
Confidence 7666554
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=6.9e-14 Score=157.32 Aligned_cols=155 Identities=16% Similarity=0.177 Sum_probs=132.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecccc-ccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKL-SGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l-~g~ip~~~~~l~~L~~L 151 (626)
..++.+++..+++.+..+...+..+.+|+.++++.|.+.+..|..+..++.|+.|+|++|++ .+.+|..+..+++|++|
T Consensus 420 ~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L 499 (635)
T 4g8a_A 420 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 499 (635)
T ss_dssp TTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred ccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEE
Confidence 34666777777777766666677889999999999999999999999999999999999985 45678889999999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCC----cccCCCCCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRL----GADSFSGNPG 224 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~----~~~~~~gn~~ 224 (626)
||++|+|++.+|. +..+++|+.|++++|++++..|.. .+++|+.|++++|+|++.+|..+..+ ....+.+||.
T Consensus 500 ~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~ 579 (635)
T 4g8a_A 500 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCB
T ss_pred ECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCC
Confidence 9999999999887 899999999999999999877753 58899999999999999999887554 3346778887
Q ss_pred CCC
Q 006903 225 LCG 227 (626)
Q Consensus 225 lcg 227 (626)
.|.
T Consensus 580 ~C~ 582 (635)
T 4g8a_A 580 ACT 582 (635)
T ss_dssp CCS
T ss_pred ccc
Confidence 774
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=3.6e-14 Score=156.31 Aligned_cols=135 Identities=18% Similarity=0.198 Sum_probs=88.1
Q ss_pred eEEEEEecCCCceeccCcccc-----CCCCCccEEEcccCCCcccCCc-c-------------------------ccCCC
Q 006903 74 SVRKIVLDGFNLSGILDTTSV-----CKTQSLVVLSLEENNIAGTVSQ-E-------------------------ISNCK 122 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~-----~~l~~L~~L~ls~N~l~g~~p~-~-------------------------~~~l~ 122 (626)
+++.|+|++|.++|.+|. .+ ..+++|+.+++++|.+ .+|. . +..++
T Consensus 248 ~L~~L~l~~n~l~~~~p~-~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~ 324 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDF-RDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKIS 324 (520)
T ss_dssp SCSEEEEEEEEEESCCCC-CCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCC
T ss_pred cccEEEeecccccCcccc-chhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCC
Confidence 456666666666666654 33 4555555555555555 2331 0 15667
Q ss_pred CCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCc--cCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEE
Q 006903 123 QLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSS--ELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQF 196 (626)
Q Consensus 123 ~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g--~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l 196 (626)
+|++|+|++|++++.+|..++++++|++|+|++|++++ .+|. +..+++|+.|++++|++++.+|.. .+++|+.|
T Consensus 325 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L 404 (520)
T 2z7x_B 325 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSL 404 (520)
T ss_dssp CCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEE
T ss_pred cccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEE
Confidence 77777777777777777777777777777777777776 4444 667777777777777777766643 35677777
Q ss_pred EccCCcCCCCCCCCC
Q 006903 197 NVSNNNLSGPVPGVN 211 (626)
Q Consensus 197 ~ls~N~l~g~ip~~~ 211 (626)
++++|.+++.+|..+
T Consensus 405 ~Ls~N~l~~~~~~~l 419 (520)
T 2z7x_B 405 NMSSNILTDTIFRCL 419 (520)
T ss_dssp ECCSSCCCGGGGGSC
T ss_pred ECcCCCCCcchhhhh
Confidence 777777777666554
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=5e-14 Score=156.35 Aligned_cols=105 Identities=23% Similarity=0.356 Sum_probs=55.8
Q ss_pred ccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCC
Q 006903 100 LVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENN 179 (626)
Q Consensus 100 L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N 179 (626)
|+.|+|++|+|++ +|. ++++++|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++ +|.++.+++|+.|++++|
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N 518 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNN 518 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCC
Confidence 4555555555554 443 555555555555555555 455555555555555555555554 345555555555555555
Q ss_pred cccccC-CCC--CCCCccEEEccCCcCCCCCC
Q 006903 180 QLRGGI-PEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 180 ~l~g~i-p~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
++++.+ |.. .+++|+.|++++|.|++.+|
T Consensus 519 ~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 519 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 555543 332 35555555555555555444
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=6.3e-14 Score=155.97 Aligned_cols=149 Identities=23% Similarity=0.221 Sum_probs=125.9
Q ss_pred CeEEEEEecCCCceeccC-ccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccC-hhhhcCCCCCe
Q 006903 73 KSVRKIVLDGFNLSGILD-TTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLP-DSLSKLNNLKR 150 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~-~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~l~~L~~ 150 (626)
.+++.|+|++|++++... +..+..+++|+.|+|++|.+.+. |..+..+++|+.|+|++|.+++..| ..+..+++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 578999999999987531 23577899999999999999975 4459999999999999999998777 46899999999
Q ss_pred EEccCCcCCccCCC-ccCcCCCcEEEcCCCccc-ccCCCC--CCCCccEEEccCCcCCCCCCCCCCCCc---ccCCCCC
Q 006903 151 LDISNNNFSSELPD-LSRISGLLTFFAENNQLR-GGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRLG---ADSFSGN 222 (626)
Q Consensus 151 L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~-g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~~---~~~~~gn 222 (626)
|+|++|.+++.+|. +..+++|+.|++++|.++ +.+|.. .+++|+.|++++|.+++.+|..+..++ ...+.+|
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 99999999998887 889999999999999998 678864 588999999999999998887765433 3344455
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.8e-14 Score=147.85 Aligned_cols=138 Identities=15% Similarity=0.153 Sum_probs=109.8
Q ss_pred eEEEEEecCCCceeccCcccc--CCCCCccEEEcccCCCcccCC----ccccCCCCCcEEEeeccccccccChhhhcCCC
Q 006903 74 SVRKIVLDGFNLSGILDTTSV--CKTQSLVVLSLEENNIAGTVS----QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNN 147 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~--~~l~~L~~L~ls~N~l~g~~p----~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~ 147 (626)
+++.|+|++|++.|.+|. .+ ..+++|+.|+|++|.+++.+| ..+..+++|++|+|++|++++..|..++.+++
T Consensus 92 ~L~~L~l~~n~l~~~~~~-~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPP-LPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp CCCEEEEESCCCBSCCCC-CSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred ceeEEEeeCCEeccchhh-hhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 488899999999988875 44 788899999999999998766 34567889999999999998888888889999
Q ss_pred CCeEEccCCcCCcc---CCC--ccCcCCCcEEEcCCCcccccCCC------CCCCCccEEEccCCcCCCCCCCCCCC
Q 006903 148 LKRLDISNNNFSSE---LPD--LSRISGLLTFFAENNQLRGGIPE------FDFSNLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 148 L~~L~ls~N~l~g~---~p~--~~~~~~L~~l~l~~N~l~g~ip~------~~~~~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
|++|||++|++++. .+. +..+++|++|++++|+++. +|. ..+++|+.|++++|.+++.+|..++.
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 246 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPR 246 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSS
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHh
Confidence 99999999998763 222 4678889999999998863 222 14688899999999998887766543
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.7e-13 Score=147.74 Aligned_cols=138 Identities=20% Similarity=0.260 Sum_probs=109.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ ..+..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|+.|+
T Consensus 88 ~~L~~L~Ls~n~i~~i~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 166 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEI-GAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLD 166 (440)
T ss_dssp SSCCEEECCSSCCCEECG-GGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCccCh-hhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeC
Confidence 578999999999987554 4788899999999999999976666789999999999999999876666788888888888
Q ss_pred ccCCcCCccCCC--ccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCCCCCCCCC
Q 006903 153 ISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 153 ls~N~l~g~~p~--~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
|++|+..+.+|. +..+++|+.|++++|+++ .+|.. .+++|+.|++++|.+++..|..+.
T Consensus 167 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 228 (440)
T 3zyj_A 167 LGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQ 228 (440)
T ss_dssp CCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTT
T ss_pred CCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhc
Confidence 888665555553 777888888888888887 45543 467788888888888777666554
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-13 Score=154.41 Aligned_cols=131 Identities=24% Similarity=0.211 Sum_probs=116.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+++..+ ..++.+++|+.|+|++|.+++..|..|+++++|++|+|++|.|++..|..|+++++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCCh-HHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 468999999999998765 4789999999999999999998888899999999999999999965445579999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g 205 (626)
|++|.|++.+|. +..+++|+.|++++|.+++. |...+++|+.|++++|.+++
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-CGGGCTTCSEEECCSSCCSE
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-ChhhhhhhhhhhcccCcccc
Confidence 999999999886 99999999999999999974 55568888889998888876
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.46 E-value=9.5e-14 Score=142.95 Aligned_cols=112 Identities=18% Similarity=0.119 Sum_probs=71.3
Q ss_pred CCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhh-cCCCCCeEEccCCcCCccCCCccCcCCCcEEE
Q 006903 97 TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLS-KLNNLKRLDISNNNFSSELPDLSRISGLLTFF 175 (626)
Q Consensus 97 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ 175 (626)
+++|+.|+|++|++++..|..+..+++|++|+|++|.+++..|..+. .+++|++|+|++|.+++. |....+++|+.|+
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~ 197 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLD 197 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEE
Confidence 45666677777777665566666667777777777777666555553 566777777777776655 3334466677777
Q ss_pred cCCCcccccCCCC-CCCCccEEEccCCcCCCCCCCC
Q 006903 176 AENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVPGV 210 (626)
Q Consensus 176 l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip~~ 210 (626)
+++|++++..|.+ .+++|+.|++++|.++ .+|..
T Consensus 198 Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~ 232 (317)
T 3o53_A 198 LSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKA 232 (317)
T ss_dssp CCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTT
T ss_pred CCCCcCCcchhhhcccCcccEEECcCCccc-chhhH
Confidence 7777776544433 3566777777777766 34544
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.4e-13 Score=128.95 Aligned_cols=130 Identities=25% Similarity=0.354 Sum_probs=111.8
Q ss_pred CCCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEE
Q 006903 57 DPCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHL 127 (626)
Q Consensus 57 ~~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 127 (626)
+.|+.+|.+|.|.... ..++.|+|++|++++.. +..+..+++|+.|+|++|++++..+..+.++++|++|
T Consensus 3 ~~C~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLP-HGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTIL 81 (177)
T ss_dssp TTCEEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCC-TTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCEeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeC-HHHhcCcccccEEECCCCcceEeChhHccCCCccCEE
Confidence 3455479999997542 46899999999998654 4467889999999999999997666678999999999
Q ss_pred EeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCC
Q 006903 128 YVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPE 187 (626)
Q Consensus 128 ~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~ 187 (626)
+|++|+|++..|..+..+++|++|+|++|+|++..+. +..+++|+.|++++|.+++..|.
T Consensus 82 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 82 YLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 9999999987777789999999999999999987776 68899999999999999987763
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-13 Score=150.47 Aligned_cols=140 Identities=19% Similarity=0.163 Sum_probs=122.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+++..| ..+..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|+.|+
T Consensus 56 ~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSAVEP-GAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCEeCh-hhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 579999999999998765 4788999999999999999976566789999999999999999999899999999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCC--CCCCCccEEEccCCcCCCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~--~~~~~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
|++|.+++..|. +..+++|+.|++++|++++..+. ..+++|+.|++++|.+++..+..+..
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~ 198 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR 198 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCS
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhccc
Confidence 999999998886 89999999999999999865443 25889999999999998876655543
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-13 Score=153.53 Aligned_cols=130 Identities=21% Similarity=0.216 Sum_probs=63.5
Q ss_pred eEEEEEecCCCceeccCc--cccCCCCCccEEEcccCCCcccCC--ccccCCCCCcEEEeeccccccccChhhhcCCCCC
Q 006903 74 SVRKIVLDGFNLSGILDT--TSVCKTQSLVVLSLEENNIAGTVS--QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLK 149 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~--~~~~~l~~L~~L~ls~N~l~g~~p--~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~ 149 (626)
+++.|+|++|.+++.+|. ..+..+++|+.|+|++|++++..+ ..+..+++|++|+|++|+|+ .+|..+..+++|+
T Consensus 335 ~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~ 413 (549)
T 2z81_A 335 SLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMR 413 (549)
T ss_dssp TCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCC
T ss_pred cccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhccccccc
Confidence 355555555555554321 123445555555555555554221 23455555555555555555 4555555555555
Q ss_pred eEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCC
Q 006903 150 RLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 150 ~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~ 209 (626)
+|+|++|.+++....+. ++|+.|++++|++++.+ ..+++|+.|++++|+++ .||.
T Consensus 414 ~L~Ls~N~l~~l~~~~~--~~L~~L~Ls~N~l~~~~--~~l~~L~~L~Ls~N~l~-~ip~ 468 (549)
T 2z81_A 414 FLNLSSTGIRVVKTCIP--QTLEVLDVSNNNLDSFS--LFLPRLQELYISRNKLK-TLPD 468 (549)
T ss_dssp EEECTTSCCSCCCTTSC--TTCSEEECCSSCCSCCC--CCCTTCCEEECCSSCCS-SCCC
T ss_pred EEECCCCCcccccchhc--CCceEEECCCCChhhhc--ccCChhcEEECCCCccC-cCCC
Confidence 55555555543211111 23444444444444322 13556666666666665 4554
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=3.4e-13 Score=139.46 Aligned_cols=134 Identities=16% Similarity=0.288 Sum_probs=78.4
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCc--ccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCe
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIA--GTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKR 150 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~--g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~ 150 (626)
..++.|+|++|.+++..+ ..+..+++|+.|+|++|.+. |..|..+.++++|++|+|++|+++ .+|..+. ++|+.
T Consensus 121 ~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~ 196 (330)
T 1xku_A 121 KTLQELRVHENEITKVRK-SVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTE 196 (330)
T ss_dssp TTCCEEECCSSCCCBBCH-HHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSE
T ss_pred ccccEEECCCCcccccCH-hHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCE
Confidence 357778888887775433 34666777777777777774 355566666666666666666665 3444332 55555
Q ss_pred EEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCC
Q 006903 151 LDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 151 L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
|+|++|.+++..|. +..+++|+.|++++|.+++..|.. .+++|+.|++++|.++ .+|..+
T Consensus 197 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 259 (330)
T 1xku_A 197 LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 259 (330)
T ss_dssp EECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred EECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh
Confidence 55555555555443 555555555555555555544421 3455555555555555 444443
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.45 E-value=2.4e-13 Score=138.26 Aligned_cols=125 Identities=29% Similarity=0.422 Sum_probs=87.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ +..+++|+.|+|++|.+++ +| .+.++++|++|+|++|++++ + +.+..+++|+.|+
T Consensus 68 ~~L~~L~L~~n~l~~~~~---l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP---LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCEEEccCCccCCCcc---cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 457777777777776432 6677777777777777765 33 37777777777777777765 3 4577777777777
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g 205 (626)
|++|++++. +.+..+++|+.|++++|++++..|-..+++|+.|++++|.+++
T Consensus 141 l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 141 LGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB
T ss_pred ccCCcCCcc-hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC
Confidence 777777764 5577777777777777777766554456777777777777764
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.44 E-value=4.4e-13 Score=140.65 Aligned_cols=140 Identities=20% Similarity=0.232 Sum_probs=118.1
Q ss_pred CCCCCCCcccEEecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCcccc-CCCCCcEEEeecccc
Q 006903 56 SDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEIS-NCKQLTHLYVGRNKL 134 (626)
Q Consensus 56 ~~~c~~~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l 134 (626)
...|. ..=.|.. ..+++++++|.. +|. . -...++.|+|++|+|++..+..+. ++++|++|+|++|+|
T Consensus 9 ~~~Cp---~~C~C~~-----~~l~c~~~~l~~-iP~-~--~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i 76 (361)
T 2xot_A 9 VVSCP---ANCLCAS-----NILSCSKQQLPN-VPQ-S--LPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHL 76 (361)
T ss_dssp CTTCC---TTCEEET-----TEEECCSSCCSS-CCS-S--CCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCC
T ss_pred CCCCC---CCCEECC-----CEEEeCCCCcCc-cCc-c--CCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcC
Confidence 46785 3346753 258999999986 443 2 235689999999999987777787 999999999999999
Q ss_pred ccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCC
Q 006903 135 SGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPV 207 (626)
Q Consensus 135 ~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~i 207 (626)
++..|..|.++++|++|||++|+|++..+. +..+++|+.|++++|++++..|.. .+++|+.|++++|.|++..
T Consensus 77 ~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 77 NFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred CccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC
Confidence 987778899999999999999999998876 899999999999999999876653 5889999999999998643
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.44 E-value=6.7e-14 Score=127.14 Aligned_cols=111 Identities=21% Similarity=0.255 Sum_probs=98.5
Q ss_pred CCCCccEEEcccCCCc-ccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcE
Q 006903 96 KTQSLVVLSLEENNIA-GTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLT 173 (626)
Q Consensus 96 ~l~~L~~L~ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~ 173 (626)
..++|+.|++++|+++ |.+|..+..+++|+.|+|++|.+++. ..++.+++|++|+|++|.+++.+|. +..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4467999999999999 89999999999999999999999975 7799999999999999999998887 667999999
Q ss_pred EEcCCCccccc-CCC--CCCCCccEEEccCCcCCCCCC
Q 006903 174 FFAENNQLRGG-IPE--FDFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 174 l~l~~N~l~g~-ip~--~~~~~L~~l~ls~N~l~g~ip 208 (626)
|++++|.+++. .|. ..+++|+.|++++|.+++..+
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999999974 222 258899999999999987655
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.7e-13 Score=156.08 Aligned_cols=139 Identities=22% Similarity=0.258 Sum_probs=123.9
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+++..| ..+..+++|++|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|++||
T Consensus 49 ~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEP-ELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLD 127 (680)
T ss_dssp TTCSEEECCSSCCCCCCT-THHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEE
T ss_pred CcCcEEECCCCccCccCH-HHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEE
Confidence 578999999999998765 4788999999999999999975555799999999999999999987778899999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC----CCCCccEEEccCCcCCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF----DFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~----~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
|++|.+++..|. +.++++|+.|++++|.+++..|.. .+++|+.|++++|.+++..|..+.
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~ 192 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFH 192 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGG
T ss_pred CCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhh
Confidence 999999998887 889999999999999999877642 468999999999999998887654
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.43 E-value=3.3e-13 Score=132.87 Aligned_cols=137 Identities=16% Similarity=0.194 Sum_probs=114.7
Q ss_pred CeEEEEEecCCC-ceeccCccccCCCCCccEEEccc-CCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCC-
Q 006903 73 KSVRKIVLDGFN-LSGILDTTSVCKTQSLVVLSLEE-NNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLK- 149 (626)
Q Consensus 73 ~~v~~l~L~~~~-l~g~~~~~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~- 149 (626)
.+++.|+|++|. +++. ++..+..+++|+.|+|++ |++++..+..|.++++|++|+|++|++++ +|. +..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i-~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQL-ESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCCEE-CTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCccee-CHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 578999999997 7654 444678899999999998 99997766788999999999999999996 787 88888888
Q ss_pred --eEEccCC-cCCccCCC-ccCcCCCc-EEEcCCCcccccCCCC--CCCCccEEEccCCc-CCCCCCCCCCC
Q 006903 150 --RLDISNN-NFSSELPD-LSRISGLL-TFFAENNQLRGGIPEF--DFSNLLQFNVSNNN-LSGPVPGVNGR 213 (626)
Q Consensus 150 --~L~ls~N-~l~g~~p~-~~~~~~L~-~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~-l~g~ip~~~~~ 213 (626)
+|+|++| ++++..+. +..+++|+ .|++++|+++ .+|.. ..++|+.|++++|. +++..|..+..
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~ 202 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGG 202 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhc
Confidence 9999999 99887776 88999999 9999999998 67764 34679999999994 88555554443
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.43 E-value=4.4e-13 Score=148.30 Aligned_cols=118 Identities=27% Similarity=0.370 Sum_probs=99.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+
T Consensus 80 ~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 146 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYIN 146 (571)
T ss_dssp TTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred CCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEe
Confidence 46889999999998 455 357889999999999998 887 765 89999999999987 777 689999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~ 209 (626)
|++|+|++ +|. .+++|+.|++++|++++ +|.+. ++|+.|++++|+|+ .+|.
T Consensus 147 Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L~~-lp~l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 147 ADNNQLTM-LPE--LPTSLEVLSVRNNQLTF-LPELP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp CCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCS-SCCC
T ss_pred CCCCccCc-CCC--cCCCcCEEECCCCCCCC-cchhh-CCCCEEECcCCCCC-chhh
Confidence 99999998 665 57889999999999987 77643 78999999999998 6776
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.4e-13 Score=150.82 Aligned_cols=117 Identities=18% Similarity=0.179 Sum_probs=69.4
Q ss_pred EEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEcc
Q 006903 75 VRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDIS 154 (626)
Q Consensus 75 v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls 154 (626)
++.|+|++|+|++ +| .++.+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 443 L~~L~Ls~n~l~~-lp--~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LC--HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp CSEEECTTSCCSS-CC--CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred ceEEEecCCCCCC-Cc--CccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 4556666666665 33 2556666666666666666 556666666666666666666664 45 56666666666666
Q ss_pred CCcCCccC-CC-ccCcCCCcEEEcCCCcccccCCCC-----CCCCccEEE
Q 006903 155 NNNFSSEL-PD-LSRISGLLTFFAENNQLRGGIPEF-----DFSNLLQFN 197 (626)
Q Consensus 155 ~N~l~g~~-p~-~~~~~~L~~l~l~~N~l~g~ip~~-----~~~~L~~l~ 197 (626)
+|+|++.+ |. +..+++|+.|++++|.+++.+|.. .+++|+.||
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 66666654 43 666666666666666666555432 155555554
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.43 E-value=2.3e-13 Score=126.23 Aligned_cols=112 Identities=18% Similarity=0.206 Sum_probs=99.0
Q ss_pred CCCCCccEEEcccCCCc-ccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCc
Q 006903 95 CKTQSLVVLSLEENNIA-GTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLL 172 (626)
Q Consensus 95 ~~l~~L~~L~ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~ 172 (626)
...++|+.|+|++|+++ |.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|. +..+++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34578999999999998 89999999999999999999999975 7799999999999999999998887 56699999
Q ss_pred EEEcCCCcccccC--CCC-CCCCccEEEccCCcCCCCCC
Q 006903 173 TFFAENNQLRGGI--PEF-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 173 ~l~l~~N~l~g~i--p~~-~~~~L~~l~ls~N~l~g~ip 208 (626)
.|++++|++++.. +.. .+++|+.|++++|.+++..+
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 9999999998742 222 58899999999999987655
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.43 E-value=5.4e-13 Score=141.32 Aligned_cols=130 Identities=25% Similarity=0.264 Sum_probs=116.1
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChh-hhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDS-LSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~-~~~l~~L~~L 151 (626)
.+++.|+|++|++.+..+ ..+..+++|+.|+|++|.+++..|..++++++|++|+|++|+++ .+|.. +.++++|++|
T Consensus 69 ~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccCcEEECCCCcccccCh-hhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEE
Confidence 468999999999987654 47889999999999999999988888999999999999999999 56655 6899999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g 205 (626)
+|++|.+++..|. +..+++|+.|++++|++++. +...+++|+.|++++|.+++
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-CGGGCTTCSEEECCSSCCSE
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCcc-ccccccccceeecccccccc
Confidence 9999999998886 89999999999999999864 55568899999999998875
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.8e-13 Score=146.69 Aligned_cols=100 Identities=21% Similarity=0.219 Sum_probs=56.3
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++.|.+ .+..+++|+.|+|++|++++ +| ++.+++|+.|+|++|++++. .++.+++|+.|+
T Consensus 148 ~~L~~L~l~~n~~~~~~---~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~ 218 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL---DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLD 218 (457)
T ss_dssp TTCCEEECTTCSCCCCC---CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEE
T ss_pred CcCCEEECCCCCccccc---ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEE
Confidence 34566666666555544 24455666666666666665 34 55555566666666655543 255555555566
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccc
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRG 183 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g 183 (626)
|++|+|++ +| +..+++|+.|++++|+++|
T Consensus 219 Ls~N~l~~-ip-~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 219 CSSNKLTE-ID-VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CCSSCCSC-CC-CTTCTTCSEEECCSSCCSC
T ss_pred CcCCcccc-cC-ccccCCCCEEEeeCCcCCC
Confidence 66555555 34 5555555555555555554
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.42 E-value=6.2e-13 Score=123.82 Aligned_cols=106 Identities=22% Similarity=0.269 Sum_probs=85.2
Q ss_pred EEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCC
Q 006903 77 KIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156 (626)
Q Consensus 77 ~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N 156 (626)
.|++++|+|+. +|. .+ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 ~l~~s~n~l~~-ip~-~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLAS-VPT-GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCSS-CCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCc-cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 57788888876 443 23 377899999999999888888899999999999999998666666788999999999999
Q ss_pred cCCccCCC-ccCcCCCcEEEcCCCcccccCC
Q 006903 157 NFSSELPD-LSRISGLLTFFAENNQLRGGIP 186 (626)
Q Consensus 157 ~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip 186 (626)
+|++..|. +..+++|+.|++++|.+++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99887775 7788888888888888776543
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.42 E-value=4.9e-13 Score=137.04 Aligned_cols=128 Identities=20% Similarity=0.299 Sum_probs=100.5
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++.+..+ +..+++|+.|+|++|.+++ +| .+..+++|+.|+|++|++++ +|. +..+++|+.|+
T Consensus 63 ~~L~~L~L~~n~i~~~~~---~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP---LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCCCCGG---GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCCChh---HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 468888888888886432 7788888888888888886 34 68888888888888888876 443 88888888888
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|.+++..+ +..+++|+.|++++|++++..+-..+++|+.|++++|.+++..|
T Consensus 136 l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 136 LDLNQITNISP-LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp CCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCCccCcCcc-ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh
Confidence 88888887544 78888888888888888865553457888888888888876544
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.41 E-value=8.2e-13 Score=122.97 Aligned_cols=106 Identities=21% Similarity=0.312 Sum_probs=94.8
Q ss_pred ccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCC
Q 006903 100 LVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAEN 178 (626)
Q Consensus 100 L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~ 178 (626)
.+.+++++|+++. +|..+. ++|++|+|++|+|++..|..|.++++|++|||++|+|++..|. +..+++|+.|++++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5789999999995 887774 8899999999999998899999999999999999999988776 78999999999999
Q ss_pred CcccccCCC-C-CCCCccEEEccCCcCCCCCC
Q 006903 179 NQLRGGIPE-F-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 179 N~l~g~ip~-~-~~~~L~~l~ls~N~l~g~ip 208 (626)
|++++..|. + .+++|+.|++++|.|++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999976664 2 58899999999999986654
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.8e-13 Score=133.27 Aligned_cols=125 Identities=24% Similarity=0.283 Sum_probs=86.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|+++. ++ .+..+++|+.|+|++|++++. |+ +.++++|+.|+|++|++++ +|.. .. ++|+.|+
T Consensus 41 ~~L~~L~l~~n~i~~-l~--~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~ 112 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA--GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLF 112 (263)
T ss_dssp TTCSEEECTTSCCCC-CT--TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEE
T ss_pred CcCcEEECcCCCccc-ch--HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEE
Confidence 356777777777764 32 466777778888888877764 33 7777778888888887775 4432 22 7777788
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ 206 (626)
|++|++++ +|.+..+++|+.|++++|++++.-+-..+++|+.|++++|.+++.
T Consensus 113 L~~N~l~~-~~~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 113 LDNNELRD-TDSLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CCSSCCSB-SGGGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC
T ss_pred ccCCccCC-ChhhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch
Confidence 88877776 355777777777888777777642222567777777777777755
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.41 E-value=5e-13 Score=149.29 Aligned_cols=126 Identities=29% Similarity=0.412 Sum_probs=103.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|+|++..+ ++.+++|+.|+|++|.|++ +| .+..|++|+.|+|++|+|++ + +.+..|++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP---LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCCCGG---GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCCChh---hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 568889999999887543 7788889999999998886 34 68888889999999998885 3 4588888899999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ 206 (626)
|++|.|++. +.+..+++|+.|+|++|.+++..|-..+++|+.|+|++|.|++.
T Consensus 138 Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 138 LGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp CCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC
T ss_pred CCCCccCCc-hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC
Confidence 999988875 66888888889999988888877755688888888888888763
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.41 E-value=3.2e-13 Score=126.46 Aligned_cols=126 Identities=15% Similarity=0.222 Sum_probs=104.9
Q ss_pred CeEEEEEecCCCceeccCccccCCCC-CccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQ-SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
..++.|+|++|+++. ++ .+..+. +|+.|+|++|++++. ..+..+++|++|+|++|+|++..|..+..+++|++|
T Consensus 19 ~~L~~L~l~~n~l~~-i~--~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IE--NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TSCEEEECTTSCCCS-CC--CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CCceEEEeeCCCCch-hH--HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 468999999999985 33 355554 999999999999975 679999999999999999996544555999999999
Q ss_pred EccCCcCCccCC--CccCcCCCcEEEcCCCcccccCCCC------CCCCccEEEccCCcCC
Q 006903 152 DISNNNFSSELP--DLSRISGLLTFFAENNQLRGGIPEF------DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 152 ~ls~N~l~g~~p--~~~~~~~L~~l~l~~N~l~g~ip~~------~~~~L~~l~ls~N~l~ 204 (626)
+|++|.|+...+ .+..+++|+.|++++|.++ .+|.. .+++|+.|+++.|...
T Consensus 94 ~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 94 ILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999965443 4888999999999999998 45652 4889999999988764
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.40 E-value=1e-12 Score=122.86 Aligned_cols=106 Identities=20% Similarity=0.267 Sum_probs=85.4
Q ss_pred EEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccC
Q 006903 76 RKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISN 155 (626)
Q Consensus 76 ~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~ 155 (626)
+.+++++|+|. .+|. .+ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|||++
T Consensus 15 ~~l~~~~n~l~-~iP~-~~--~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPA-GI--PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCC-Cc--CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 45888999885 4554 33 37899999999999988888899999999999999999875445568899999999999
Q ss_pred CcCCccCCC-ccCcCCCcEEEcCCCcccccC
Q 006903 156 NNFSSELPD-LSRISGLLTFFAENNQLRGGI 185 (626)
Q Consensus 156 N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~i 185 (626)
|+|++..+. +..+++|+.|++++|.+....
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 999987776 778888888888888877543
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-12 Score=135.86 Aligned_cols=135 Identities=17% Similarity=0.237 Sum_probs=116.5
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..| ..+..+++|+.|+|++|+++ .+|..+. ++|++|+|++|++++..+..+.++++|+.|+
T Consensus 78 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 153 (332)
T 2ft3_A 78 QHLYALVLVNNKISKIHE-KAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE 153 (332)
T ss_dssp TTCCEEECCSSCCCEECG-GGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE
T ss_pred CCCcEEECCCCccCccCH-hHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEE
Confidence 579999999999998765 47899999999999999999 6887766 8999999999999976666799999999999
Q ss_pred ccCCcCC--ccCCC-ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCCCCCC
Q 006903 153 ISNNNFS--SELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 153 ls~N~l~--g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
|++|.++ +..|. +..+ +|+.|++++|++++ +|....++|+.|++++|.+++..|..+..
T Consensus 154 l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~i~~~~~~~l~~ 215 (332)
T 2ft3_A 154 MGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPETLNELHLDHNKIQAIELEDLLR 215 (332)
T ss_dssp CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSCSSCSCCBCCSSCCCCCCTTSSTT
T ss_pred CCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccccCCCCEEECCCCcCCccCHHHhcC
Confidence 9999996 35565 6666 99999999999986 77666789999999999999887766544
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=8.3e-13 Score=135.33 Aligned_cols=124 Identities=21% Similarity=0.382 Sum_probs=69.5
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
+++.|+++++++.. ++ .+..+++|+.|+|++|++++. |. +..+++|++|+|++|++++ +| .+..+++|+.|+|
T Consensus 42 ~L~~L~l~~~~i~~-l~--~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE--GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp TCCEEECTTSCCCC-CT--TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CcCEEEeeCCCccC-ch--hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 45556666665553 22 345556666666666666542 32 5566666666666666654 22 4556666666666
Q ss_pred cCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC
Q 006903 154 SNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 154 s~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g 205 (626)
++|++++ +|.+..+++|+.|++++|++++..+-..+++|+.|++++|.+++
T Consensus 115 ~~n~l~~-~~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 115 TSTQITD-VTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp TTSCCCC-CGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCC-chhhcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCCC
Confidence 6666655 23355566666666666666554332345566666666666654
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5.8e-13 Score=144.64 Aligned_cols=128 Identities=24% Similarity=0.336 Sum_probs=104.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+++..+ +..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 243 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP---LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp TTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCEEECCCCccccchh---hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 468889999999887643 6788889999999999887444 7888899999999999886544 78888999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|++++..| +..+++|+.|++++|.+++..+-..+++|+.|++++|+++|.+|
T Consensus 316 L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 316 LYFNNISDISP-VSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp CCSSCCSCCGG-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCGG
T ss_pred CcCCcCCCchh-hccCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccCccch
Confidence 99999888766 77888888888888888876322357888888888888888877
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-12 Score=121.84 Aligned_cols=104 Identities=17% Similarity=0.298 Sum_probs=92.4
Q ss_pred ccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCC
Q 006903 100 LVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAEN 178 (626)
Q Consensus 100 L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~ 178 (626)
-+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+. +..+++|+.|++++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999996 6888775 8999999999999998899999999999999999999997776 68999999999999
Q ss_pred CcccccCCC-C-CCCCccEEEccCCcCCCC
Q 006903 179 NQLRGGIPE-F-DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 179 N~l~g~ip~-~-~~~~L~~l~ls~N~l~g~ 206 (626)
|++++..+. + .+++|+.|++++|.|+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 999976554 2 588999999999998743
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.39 E-value=8.6e-13 Score=132.02 Aligned_cols=125 Identities=19% Similarity=0.226 Sum_probs=108.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ +..+++|+.|+|++|++++ +|.. .. ++|+.|+|++|++++ +| .+..+++|+.|+
T Consensus 63 ~~L~~L~L~~N~i~~~~~---l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP---LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCCCCGG---GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccCCChh---hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 579999999999998543 8899999999999999997 5543 33 999999999999996 44 699999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ 206 (626)
|++|++++. |.+..+++|+.|++++|++++.-.-..+++|+.|++++|.+++.
T Consensus 135 Ls~N~i~~~-~~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKSI-VMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC-GGGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCCC-hHHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 999999985 67999999999999999999872223688999999999999866
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.39 E-value=9.1e-13 Score=133.90 Aligned_cols=127 Identities=23% Similarity=0.415 Sum_probs=111.4
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+++++++... + .+..+++|+.|+|++|++++..| +.++++|++|+|++|++++ +| .+..+++|++|+
T Consensus 46 ~~L~~L~l~~~~i~~~-~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HTCCEEECTTSCCCCC-T--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred CcccEEEccCCCcccC-h--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 4688999999999864 2 47889999999999999997544 9999999999999999986 44 499999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|++++ ++.+..+++|+.|++++|++++. +.. .+++|+.|++++|.+++..|
T Consensus 119 L~~n~i~~-~~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 119 LEHNGISD-INGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CTTSCCCC-CGGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CCCCcCCC-ChhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh
Confidence 99999998 47799999999999999999976 443 68999999999999998665
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=4.7e-13 Score=139.84 Aligned_cols=133 Identities=19% Similarity=0.192 Sum_probs=113.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccCh--hhhcCCCCCe
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPD--SLSKLNNLKR 150 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~--~~~~l~~L~~ 150 (626)
.+++.|+|++|++++..+ ..+..+++|+.|+|++|++++..+..+.++++|++|+|++|+++ .+|. .+.++++|++
T Consensus 76 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEE-DSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCEEECCCCccCccCH-hhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 579999999999998654 46889999999999999999754455899999999999999998 4665 7899999999
Q ss_pred EEccCCc-CCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 151 LDISNNN-FSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 151 L~ls~N~-l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
|+|++|+ +++..|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.++ .+|
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~ 214 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLL 214 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THH
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cch
Confidence 9999995 6666565 889999999999999999887764 5788999999999884 344
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.4e-15 Score=145.50 Aligned_cols=132 Identities=22% Similarity=0.307 Sum_probs=105.0
Q ss_pred eEEEEEecCCCceeccCc-----cccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCC
Q 006903 74 SVRKIVLDGFNLSGILDT-----TSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNL 148 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~-----~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L 148 (626)
.++.++|+.+.|+|.+|. ..+..+++|+.|+|++|++++ +| .+.++++|++|+|++|+++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455566666677776653 156778889999999999987 77 8888999999999999998 688888888899
Q ss_pred CeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCC--C-CCCCCccEEEccCCcCCCCCCC
Q 006903 149 KRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIP--E-FDFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 149 ~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip--~-~~~~~L~~l~ls~N~l~g~ip~ 209 (626)
++|+|++|++++ +|.+..+++|+.|++++|++++..+ . ..+++|+.|++++|.+++.+|.
T Consensus 96 ~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 96 EELWISYNQIAS-LSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEEEEEEECCC-HHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CEEECcCCcCCc-CCccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 999999999987 4678888889999999999885322 2 2578899999999988877664
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.37 E-value=2.9e-12 Score=138.54 Aligned_cols=135 Identities=25% Similarity=0.367 Sum_probs=73.2
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
+++.|+|++|++++ +| .++.+++|+.|++++|++++ +|..+ .+|++|+|++|++++ +| .++++++|+.|++
T Consensus 132 ~L~~L~L~~n~l~~-lp--~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP--ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TCCEEECCSSCCSS-CC--CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCEEECcCCCCCC-Cc--ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 34444444444444 33 24455555555555555553 34322 245555555555554 44 3555555566666
Q ss_pred cCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCCCCCCCCCCCcccCCCCC
Q 006903 154 SNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGN 222 (626)
Q Consensus 154 s~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~gn 222 (626)
++|++++ +|.+. ++|+.|++++|+++ .+|.+ .+++|+.|++++|++++ +|.....+....+.+|
T Consensus 203 ~~N~l~~-l~~~~--~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N 267 (454)
T 1jl5_A 203 DNNSLKK-LPDLP--LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDN 267 (454)
T ss_dssp CSSCCSS-CCCCC--TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSS
T ss_pred CCCcCCc-CCCCc--CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc-ccccccccCEEECCCC
Confidence 6555554 33211 35566666666665 55543 47788999999999886 5655444444444444
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.36 E-value=8.3e-13 Score=135.87 Aligned_cols=136 Identities=21% Similarity=0.239 Sum_probs=113.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCcccc-CCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEIS-NCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
..++.|+|++|.+++..+ ..+..+++|+.|+|++|.+++..|..+. .+++|++|+|++|++++. |. ...+++|++|
T Consensus 120 ~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L 196 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRD-LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTL 196 (317)
T ss_dssp SSCEEEECCSSCCCSGGG-BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEE
T ss_pred CCCCEEECCCCCCCCccc-hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEE
Confidence 357778888888877554 3677889999999999999998787774 799999999999999865 43 3459999999
Q ss_pred EccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCC-CCCCCCCC
Q 006903 152 DISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLS-GPVPGVNG 212 (626)
Q Consensus 152 ~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~-g~ip~~~~ 212 (626)
+|++|++++..|.+..+++|+.|++++|++++ +|.. .+++|+.|++++|.++ +.+|..+.
T Consensus 197 ~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 197 DLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp ECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred ECCCCcCCcchhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 99999999987889999999999999999995 5653 5789999999999998 65555443
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.5e-12 Score=138.06 Aligned_cols=123 Identities=24% Similarity=0.240 Sum_probs=90.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+++ ++ +..+++|+.|+|++|++++ +| ++++++|++|++++|++.|.++ ++.+++|+.|+
T Consensus 106 ~~L~~L~L~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ 176 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD---VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLD 176 (457)
T ss_dssp TTCCEEECCSSCCSC-CC---CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCC--CTTCTTCCEEE
T ss_pred CcCCEEECCCCcCCe-ec---CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccc--cccCCcCCEEE
Confidence 568889999999887 32 6788888888888888887 43 7777888888888886666663 66777777777
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|++++ +| +..+++|+.|++++|++++. +-..+++|+.|++++|++++ +|
T Consensus 177 ls~n~l~~-l~-l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~-ip 228 (457)
T 3bz5_A 177 CSFNKITE-LD-VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE-ID 228 (457)
T ss_dssp CCSSCCCC-CC-CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC-CC
T ss_pred CCCCccce-ec-cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcCCcccc-cC
Confidence 77777777 34 66667777777777777654 43456677777777777776 44
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.9e-12 Score=144.63 Aligned_cols=127 Identities=24% Similarity=0.387 Sum_probs=113.4
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.|++. + .+..+++|+.|+|++|+|++ + +.+..|++|+.|+|++|+|++. +.+..|++|+.|+
T Consensus 87 ~~L~~L~Ls~N~l~~l-~--~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 159 (605)
T 1m9s_A 87 KNLGWLFLDENKIKDL-S--SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLS 159 (605)
T ss_dssp TTCCEEECCSSCCCCC-T--TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEE
T ss_pred CCCCEEECcCCCCCCC-h--hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEE
Confidence 5799999999999873 2 68899999999999999997 3 4699999999999999999975 6799999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|.|++.+| +..+++|+.|+|++|++++. |.. .+++|+.|+|++|.+++...
T Consensus 160 Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 160 LEDNQISDIVP-LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp CCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECCCC
T ss_pred CcCCcCCCchh-hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCCcc
Confidence 99999999877 99999999999999999975 543 68999999999999987643
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.7e-12 Score=140.91 Aligned_cols=126 Identities=25% Similarity=0.367 Sum_probs=113.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++.+. +.+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.+++..| +..+++|+.|+
T Consensus 221 ~~L~~L~l~~n~l~~~---~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 293 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI---GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 293 (466)
T ss_dssp TTCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred CCCCEEECCCCCcccc---hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEE
Confidence 5789999999999874 257889999999999999998655 8999999999999999997544 89999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ 206 (626)
|++|++++..| +..+++|+.|++++|++++..|...+++|+.|++++|.+++.
T Consensus 294 L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 294 LNENQLEDISP-ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred cCCCcccCchh-hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 99999998655 889999999999999999988866799999999999999985
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.2e-12 Score=134.16 Aligned_cols=128 Identities=21% Similarity=0.295 Sum_probs=72.3
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|+|++|++++. |. +..+++|++|+
T Consensus 177 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~ 249 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP---LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLE 249 (347)
T ss_dssp TTCSEEECTTSCCCCCGG---GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCccccccc---ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEE
Confidence 457777777777765322 4555666666666666654333 55566666666666666533 22 55566666666
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip~ 209 (626)
|++|.+++ ++.+..+++|+.|++++|++++. |.. .+++|+.|++++|.+++..|.
T Consensus 250 l~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 250 IGTNQISD-INAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp CCSSCCCC-CGGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred CCCCccCC-ChhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChh
Confidence 66666554 24455555666666666655543 322 355555555555555554443
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.1e-12 Score=134.40 Aligned_cols=143 Identities=25% Similarity=0.366 Sum_probs=117.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|++++|.+.+..+ +..+++|+.|+|++|.+++..+ +..+++|++|+|++|.+++ + +.+..+++|+.|+
T Consensus 199 ~~L~~L~l~~n~l~~~~~---~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP---VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLN 271 (347)
T ss_dssp TTCCEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEE
T ss_pred CccceeecccCCCCCCch---hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEE
Confidence 568899999999987543 6788999999999999987443 8999999999999999986 3 5689999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC-CCCCCCcccCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP-GVNGRLGADSFSGNP 223 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip-~~~~~~~~~~~~gn~ 223 (626)
|++|++++. |.+..+++|+.|++++|.+++..|.. .+++|+.|++++|.+++..| ..+.++....+.+|+
T Consensus 272 l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 272 VGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp CCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC-
T ss_pred ccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhc
Confidence 999999885 77889999999999999999877763 68999999999999998877 112333444455553
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.32 E-value=8.1e-12 Score=135.03 Aligned_cols=121 Identities=27% Similarity=0.440 Sum_probs=88.7
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
+++.|+|++|++++. +. ..++|+.|+|++|++++ +| +++++++|++|++++|++++ +|..+ .+|++|+|
T Consensus 112 ~L~~L~l~~n~l~~l-~~----~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 112 SLKSLLVDNNNLKAL-SD----LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TCCEEECCSSCCSCC-CS----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCcEEECCCCccCcc-cC----CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 455566666655542 11 12578888888888886 77 58888888888888888875 66543 57888888
Q ss_pred cCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCC
Q 006903 154 SNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 154 s~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~ 209 (626)
++|++++ +|.+..+++|+.|++++|++++ +|.. .++|+.|++++|.++ .+|.
T Consensus 181 ~~n~l~~-l~~~~~l~~L~~L~l~~N~l~~-l~~~-~~~L~~L~l~~n~l~-~lp~ 232 (454)
T 1jl5_A 181 GNNQLEE-LPELQNLPFLTAIYADNNSLKK-LPDL-PLSLESIVAGNNILE-ELPE 232 (454)
T ss_dssp CSSCCSS-CCCCTTCTTCCEEECCSSCCSS-CCCC-CTTCCEEECCSSCCS-SCCC
T ss_pred cCCcCCc-CccccCCCCCCEEECCCCcCCc-CCCC-cCcccEEECcCCcCC-cccc
Confidence 8888887 6678888888888888888886 4532 368888888888888 6775
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.29 E-value=7.1e-12 Score=130.48 Aligned_cols=101 Identities=19% Similarity=0.177 Sum_probs=84.0
Q ss_pred cCC-CceeccCccccCCCCCccEEEccc-CCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcC
Q 006903 81 DGF-NLSGILDTTSVCKTQSLVVLSLEE-NNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158 (626)
Q Consensus 81 ~~~-~l~g~~~~~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l 158 (626)
+++ +|++ +|. +..+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|+|..|..|.+|++|+.|||++|+|
T Consensus 16 ~~~n~l~~-ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 92 (347)
T 2ifg_A 16 TRDGALDS-LHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNAL 92 (347)
T ss_dssp CSSCCCTT-TTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCC
T ss_pred CCCCCCCc-cCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCcc
Confidence 344 5665 554 88889999999996 999988778899999999999999999998888999999999999999999
Q ss_pred CccCCCccCcCCCcEEEcCCCccccc
Q 006903 159 SSELPDLSRISGLLTFFAENNQLRGG 184 (626)
Q Consensus 159 ~g~~p~~~~~~~L~~l~l~~N~l~g~ 184 (626)
++.+|.+.....|+.|++.+|.|...
T Consensus 93 ~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 93 ESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred ceeCHHHcccCCceEEEeeCCCccCC
Confidence 98777643333388888888888743
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.7e-12 Score=143.64 Aligned_cols=142 Identities=24% Similarity=0.341 Sum_probs=102.6
Q ss_pred CCCCCCCCCCCCcccE--------EecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCC
Q 006903 51 GWNRSSDPCSGKWVGV--------TCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCK 122 (626)
Q Consensus 51 ~w~~~~~~c~~~w~gv--------~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~ 122 (626)
.|....++| .|.|. .|.. ..++.|++++|+|+ .+|. .+. ++|+.|+|++|+|+ .+|. .++
T Consensus 14 ~W~~~~~~~--~~~~r~~~~~~~~~c~~--~~l~~L~ls~n~L~-~lp~-~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 14 AWRRAAPAE--ESRGRAAVVQKMRACLN--NGNAVLNVGESGLT-TLPD-CLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp HHHHTCCGG--GHHHHHHHHHHHHHHHH--HCCCEEECCSSCCS-CCCS-CCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHhcCCcc--hhccccccCcccccccC--CCCcEEEecCCCcC-ccCh-hhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 476556777 68654 2332 34788999999998 5554 333 78999999999988 4676 578
Q ss_pred CCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCc
Q 006903 123 QLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNN 202 (626)
Q Consensus 123 ~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~ 202 (626)
+|++|+|++|+|+ .+|. .+++|++|+|++|++++..+ .+++|+.|++++|++++ +|. .+++|+.|++++|+
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l~~---~l~~L~~L~L~~N~l~~-lp~-~l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHLPA---LPSGLCKLWIFGNQLTS-LPV-LPPGLQELSVSDNQ 152 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCCCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSC
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCCCC---CCCCcCEEECCCCCCCc-CCC-CCCCCCEEECcCCc
Confidence 8999999999987 4776 67888999999998887443 55778888888888875 554 35778888888888
Q ss_pred CCCCCCCCCCCC
Q 006903 203 LSGPVPGVNGRL 214 (626)
Q Consensus 203 l~g~ip~~~~~~ 214 (626)
+++ +|..+..+
T Consensus 153 l~~-l~~~~~~L 163 (622)
T 3g06_A 153 LAS-LPALPSEL 163 (622)
T ss_dssp CSC-CCCCCTTC
T ss_pred CCC-cCCccCCC
Confidence 775 44443333
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.25 E-value=5.9e-13 Score=140.85 Aligned_cols=150 Identities=18% Similarity=0.223 Sum_probs=108.8
Q ss_pred CeEEEEEecCCCceeccC---ccccCCC---------CCccEEEcccCCCc-ccCC---ccccCCCCCcEEEeeccccc-
Q 006903 73 KSVRKIVLDGFNLSGILD---TTSVCKT---------QSLVVLSLEENNIA-GTVS---QEISNCKQLTHLYVGRNKLS- 135 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~---~~~~~~l---------~~L~~L~ls~N~l~-g~~p---~~~~~l~~L~~L~l~~N~l~- 135 (626)
.+++.|+|++|++++..+ +..+..+ ++|+.|+|++|+++ +.+| ..+..+++|++|+|++|+++
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 201 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 201 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCH
Confidence 568889999998864221 1234444 78889999999987 4555 46678888999999999887
Q ss_pred -c---ccChhhhcCCCCCeEEccCCcCC----ccCCC-ccCcCCCcEEEcCCCccccc----CCCC----CCCCccEEEc
Q 006903 136 -G---NLPDSLSKLNNLKRLDISNNNFS----SELPD-LSRISGLLTFFAENNQLRGG----IPEF----DFSNLLQFNV 198 (626)
Q Consensus 136 -g---~ip~~~~~l~~L~~L~ls~N~l~----g~~p~-~~~~~~L~~l~l~~N~l~g~----ip~~----~~~~L~~l~l 198 (626)
| .+|..+..+++|+.|+|++|.|+ +.+|. +..+++|+.|++++|.+++. +|.. .+++|+.|++
T Consensus 202 ~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L 281 (386)
T 2ca6_A 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 281 (386)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEEC
T ss_pred hHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEEC
Confidence 3 34557888889999999999986 55665 77888899999999988865 4432 3788899999
Q ss_pred cCCcCCC----CCCCCC----CCCcccCCCCC
Q 006903 199 SNNNLSG----PVPGVN----GRLGADSFSGN 222 (626)
Q Consensus 199 s~N~l~g----~ip~~~----~~~~~~~~~gn 222 (626)
++|.+++ .+|..+ .++....+.+|
T Consensus 282 ~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N 313 (386)
T 2ca6_A 282 QYNEIELDAVRTLKTVIDEKMPDLLFLELNGN 313 (386)
T ss_dssp CSSCCBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred cCCcCCHHHHHHHHHHHHhcCCCceEEEccCC
Confidence 9998887 466543 23333444454
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.4e-11 Score=128.56 Aligned_cols=146 Identities=14% Similarity=0.101 Sum_probs=107.5
Q ss_pred CCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCc-cccCCCCCcE-E
Q 006903 59 CSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQ-EISNCKQLTH-L 127 (626)
Q Consensus 59 c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~-L 127 (626)
|.-.|..|.|++.. ..++.|+|++|+|+. +|+..+..+++|+.|+|++|++.+.+|. .|.++++|.. +
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~-i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l 85 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV-IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR 85 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSE-ECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCC-cCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhh
Confidence 53368889997542 358899999999985 5555688999999999999999887875 5678888765 6
Q ss_pred EeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCC----CCCccEEEccCCc
Q 006903 128 YVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFD----FSNLLQFNVSNNN 202 (626)
Q Consensus 128 ~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~----~~~L~~l~ls~N~ 202 (626)
++++|++++..|..|..+++|++|++++|.+++..+. +.....+..+++++|.--..+|... ...++.|++++|.
T Consensus 86 ~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 86 IEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred cccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccc
Confidence 7778999977778889999999999999999876664 4455566667775543333444322 2346667777777
Q ss_pred CCC
Q 006903 203 LSG 205 (626)
Q Consensus 203 l~g 205 (626)
++.
T Consensus 166 i~~ 168 (350)
T 4ay9_X 166 IQE 168 (350)
T ss_dssp CCE
T ss_pred ccC
Confidence 763
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.24 E-value=4e-13 Score=139.06 Aligned_cols=126 Identities=22% Similarity=0.216 Sum_probs=71.2
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCccc-CCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGT-VSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.++.|+|++|.+.+.++. +..+++|+.|+|++|.+++. +|..+..+++|++|+|++|.+++.+|..++++++|++|+
T Consensus 71 ~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred cceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 455666666666655432 44556666666666666554 555556666666666666666655666666666666666
Q ss_pred ccCC-cCCcc-CCC-ccCcCCCcEEEcCCC-ccccc-CCCC--CCC-CccEEEccCC
Q 006903 153 ISNN-NFSSE-LPD-LSRISGLLTFFAENN-QLRGG-IPEF--DFS-NLLQFNVSNN 201 (626)
Q Consensus 153 ls~N-~l~g~-~p~-~~~~~~L~~l~l~~N-~l~g~-ip~~--~~~-~L~~l~ls~N 201 (626)
|++| .+++. +|. +..+++|+.|++++| .+++. +|.. .++ +|+.|++++|
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 6666 45542 343 455556666666666 55542 2221 244 5555555555
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.6e-11 Score=135.68 Aligned_cols=137 Identities=26% Similarity=0.311 Sum_probs=72.0
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecccccc--ccChhhhcC------
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSG--NLPDSLSKL------ 145 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~ip~~~~~l------ 145 (626)
+++.|+|++|+|++. |. .+++|+.|+|++|++++ +|.. +++|++|+|++|++++ ..|..+..|
T Consensus 102 ~L~~L~Ls~N~l~~l-~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~ 172 (622)
T 3g06_A 102 GLLELSIFSNPLTHL-PA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQ 172 (622)
T ss_dssp TCCEEEECSCCCCCC-CC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSC
T ss_pred CCCEEECcCCcCCCC-CC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcCCccCCCCEEECCCCC
Confidence 344455555554442 11 33455555555555553 4432 2455555555555553 111222222
Q ss_pred --------CCCCeEEccCCcCCccCCC---ccC--------------cCCCcEEEcCCCcccccCCCCCCCCccEEEccC
Q 006903 146 --------NNLKRLDISNNNFSSELPD---LSR--------------ISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSN 200 (626)
Q Consensus 146 --------~~L~~L~ls~N~l~g~~p~---~~~--------------~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~ 200 (626)
++|+.|+|++|+|++..+. +.. +++|+.|++++|++++ +| ..+++|+.|++++
T Consensus 173 l~~l~~~~~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp-~~l~~L~~L~Ls~ 250 (622)
T 3g06_A 173 LTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP-VLPSELKELMVSG 250 (622)
T ss_dssp CSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC-CCCTTCCEEECCS
T ss_pred CCCCcccCCCCcEEECCCCCCCCCCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-CC-CCCCcCcEEECCC
Confidence 6667777777776652211 111 2567777777777775 55 4456777777777
Q ss_pred CcCCCCCCCCCCCCcccCCCCC
Q 006903 201 NNLSGPVPGVNGRLGADSFSGN 222 (626)
Q Consensus 201 N~l~g~ip~~~~~~~~~~~~gn 222 (626)
|.|+ .+|..+.++....+.+|
T Consensus 251 N~L~-~lp~~~~~L~~L~Ls~N 271 (622)
T 3g06_A 251 NRLT-SLPMLPSGLLSLSVYRN 271 (622)
T ss_dssp SCCS-CCCCCCTTCCEEECCSS
T ss_pred CCCC-cCCcccccCcEEeCCCC
Confidence 7777 45554444444444444
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.23 E-value=1.9e-11 Score=127.27 Aligned_cols=103 Identities=19% Similarity=0.198 Sum_probs=90.4
Q ss_pred EEEcccC-CCcccCCccccCCCCCcEEEeec-cccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCC
Q 006903 102 VLSLEEN-NIAGTVSQEISNCKQLTHLYVGR-NKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAEN 178 (626)
Q Consensus 102 ~L~ls~N-~l~g~~p~~~~~l~~L~~L~l~~-N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~ 178 (626)
.+++++| +|++ ||. |..+++|+.|+|++ |+|++..|..|+.|++|+.|||++|+|++.+|. |.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4688888 8985 898 99999999999996 999988778899999999999999999999987 89999999999999
Q ss_pred CcccccCCCC-CCCCccEEEccCCcCCCC
Q 006903 179 NQLRGGIPEF-DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 179 N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ 206 (626)
|+|++..|.. ...+|+.|++++|.|...
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCC
Confidence 9999655442 233499999999999754
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.4e-11 Score=115.07 Aligned_cols=111 Identities=16% Similarity=0.179 Sum_probs=93.8
Q ss_pred ccCCCCCccEEEcccCCCcccCCccccCCC-CCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCC
Q 006903 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCK-QLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISG 170 (626)
Q Consensus 93 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~ 170 (626)
....+.+|+.|+|++|+++. +|. +..+. +|++|+|++|.+++. +.+..+++|++|+|++|.|++..|. +..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 35567899999999999995 564 55555 999999999999974 6799999999999999999987666 489999
Q ss_pred CcEEEcCCCcccccCCC---C-CCCCccEEEccCCcCCCCCCC
Q 006903 171 LLTFFAENNQLRGGIPE---F-DFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 171 L~~l~l~~N~l~g~ip~---~-~~~~L~~l~ls~N~l~g~ip~ 209 (626)
|+.|++++|+++ .+|. . .+++|+.|++++|.++ .+|.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~ 130 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKH 130 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTT
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHh
Confidence 999999999995 5564 2 5889999999999997 3443
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.19 E-value=2e-13 Score=130.45 Aligned_cols=124 Identities=23% Similarity=0.337 Sum_probs=107.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++ +| .+..+++|+.|+|++|.++ .+|..+..+++|++|+|++|++++ +| .+..+++|+.|+
T Consensus 48 ~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 478999999999988 54 6888999999999999999 689888889999999999999996 56 799999999999
Q ss_pred ccCCcCCccCC--CccCcCCCcEEEcCCCcccccCCC------------CCCCCccEEEccCCcCC
Q 006903 153 ISNNNFSSELP--DLSRISGLLTFFAENNQLRGGIPE------------FDFSNLLQFNVSNNNLS 204 (626)
Q Consensus 153 ls~N~l~g~~p--~~~~~~~L~~l~l~~N~l~g~ip~------------~~~~~L~~l~ls~N~l~ 204 (626)
|++|++++..+ .+..+++|+.|++++|.+++.+|. ..+++|+.|| +|.++
T Consensus 122 l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 99999997443 588999999999999999998775 1478899886 55554
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.18 E-value=2.3e-12 Score=133.28 Aligned_cols=138 Identities=17% Similarity=0.222 Sum_probs=90.6
Q ss_pred CeEEEEEecCCCceec-cCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecc-ccccc-cChhhhcCCCCC
Q 006903 73 KSVRKIVLDGFNLSGI-LDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN-KLSGN-LPDSLSKLNNLK 149 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~-~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N-~l~g~-ip~~~~~l~~L~ 149 (626)
.+++.|+|++|.+++. ++ ..+..+++|+.|+|++|.+++.+|..+..+++|++|+|++| .+++. +|..+.++++|+
T Consensus 93 ~~L~~L~L~~~~l~~~~~~-~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLH-GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp BCCCEEECTTCEECHHHHH-HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEEccCCCcCHHHHH-HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 4567777777776654 43 24566777777777777777777777777777777777777 56652 666677777777
Q ss_pred eEEccCC-cCCcc-CCC-ccCcC-CCcEEEcCCC--ccc-ccCCCC--CCCCccEEEccCCc-CCCCCCCCC
Q 006903 150 RLDISNN-NFSSE-LPD-LSRIS-GLLTFFAENN--QLR-GGIPEF--DFSNLLQFNVSNNN-LSGPVPGVN 211 (626)
Q Consensus 150 ~L~ls~N-~l~g~-~p~-~~~~~-~L~~l~l~~N--~l~-g~ip~~--~~~~L~~l~ls~N~-l~g~ip~~~ 211 (626)
+|+|++| .+++. +|. +..++ +|++|++++| .++ +.+|.. .+++|+.|++++|. +++..+..+
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l 243 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF 243 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHH
Confidence 7777777 77654 444 56666 7777777777 444 334432 36677777777777 555555443
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.16 E-value=2.5e-12 Score=136.00 Aligned_cols=110 Identities=19% Similarity=0.269 Sum_probs=52.8
Q ss_pred CCCCCccEEEcccCCCcc----cCCccccCCCCCcEEEeeccccccccChhh----hcC---------CCCCeEEccCCc
Q 006903 95 CKTQSLVVLSLEENNIAG----TVSQEISNCKQLTHLYVGRNKLSGNLPDSL----SKL---------NNLKRLDISNNN 157 (626)
Q Consensus 95 ~~l~~L~~L~ls~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~----~~l---------~~L~~L~ls~N~ 157 (626)
..+++|+.|+|++|.+++ .+|..+.++++|++|+|++|.+++..+..+ ..+ ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 345555555555555554 344455555555555555555543322222 222 555555555555
Q ss_pred CC-ccCCC----ccCcCCCcEEEcCCCccc--c---cCC-CC-CCCCccEEEccCCcCC
Q 006903 158 FS-SELPD----LSRISGLLTFFAENNQLR--G---GIP-EF-DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 158 l~-g~~p~----~~~~~~L~~l~l~~N~l~--g---~ip-~~-~~~~L~~l~ls~N~l~ 204 (626)
++ +.+|. +..+++|+.|++++|+++ | .+| .. .+++|+.|++++|.++
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCH
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCC
Confidence 54 33331 334455555555555554 2 122 11 2445555555555553
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=8.1e-11 Score=117.31 Aligned_cols=136 Identities=14% Similarity=0.052 Sum_probs=105.3
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
..++.|+.+.||++... ++.+++|...... .....+.+|+++++.+. |..+.++++++...+..|+||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 45777888999999854 6889999987532 23346889999998884 677888999988888999999999999998
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc---------------------------------------------
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL--------------------------------------------- 464 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~--------------------------------------------- 464 (626)
+.+.. ......++.+++++|+.||..-
T Consensus 99 ~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (263)
T 3tm0_A 99 EEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL 170 (263)
T ss_dssp HHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHH
T ss_pred hccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHH
Confidence 76421 1123478889999999999710
Q ss_pred ----------cCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 465 ----------REDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 465 ----------~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
....++|+|++|.|||++++..+.|.||+.+.
T Consensus 171 ~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876556799998753
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.8e-11 Score=128.21 Aligned_cols=135 Identities=25% Similarity=0.262 Sum_probs=78.2
Q ss_pred eEEEEEecCCCceeccCc---cccCCCC-CccEEEcccCCCcccCCccccCC-----CCCcEEEeeccccccccChhhhc
Q 006903 74 SVRKIVLDGFNLSGILDT---TSVCKTQ-SLVVLSLEENNIAGTVSQEISNC-----KQLTHLYVGRNKLSGNLPDSLSK 144 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~---~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~ip~~~~~ 144 (626)
.++.|+|++|.+++..+. ..+..++ +|+.|+|++|.+++..+..+..+ ++|++|+|++|++++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 366677777766553320 2344555 67777777777766656555543 66777777777776655554433
Q ss_pred ----C-CCCCeEEccCCcCCccCCC-c----cC-cCCCcEEEcCCCcccccCCCC------CC-CCccEEEccCCcCCCC
Q 006903 145 ----L-NNLKRLDISNNNFSSELPD-L----SR-ISGLLTFFAENNQLRGGIPEF------DF-SNLLQFNVSNNNLSGP 206 (626)
Q Consensus 145 ----l-~~L~~L~ls~N~l~g~~p~-~----~~-~~~L~~l~l~~N~l~g~ip~~------~~-~~L~~l~ls~N~l~g~ 206 (626)
+ ++|++|||++|.|++..+. + .. .++|++|++++|++++..+.. .+ ++|+.|++++|.+++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchh
Confidence 2 6677777777776655442 2 22 246677777777666432211 22 2667777777766654
Q ss_pred CC
Q 006903 207 VP 208 (626)
Q Consensus 207 ip 208 (626)
.+
T Consensus 183 ~~ 184 (362)
T 3goz_A 183 NC 184 (362)
T ss_dssp CH
T ss_pred hH
Confidence 44
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.12 E-value=1e-11 Score=130.21 Aligned_cols=127 Identities=20% Similarity=0.201 Sum_probs=68.1
Q ss_pred EEecCCCceeccCccccCCCCCccEEEcccCCCcccCC----ccccCCC-CCcEEEeeccccccccChhhhcC-----CC
Q 006903 78 IVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVS----QEISNCK-QLTHLYVGRNKLSGNLPDSLSKL-----NN 147 (626)
Q Consensus 78 l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p----~~~~~l~-~L~~L~l~~N~l~g~ip~~~~~l-----~~ 147 (626)
.+|+.|+++|.+|. .+...++|+.|+|++|.+++..+ ..+.+++ +|++|+|++|++++..+..+..+ ++
T Consensus 3 ~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 34555666655542 33444446666666666655444 4445555 56666666666655555555543 56
Q ss_pred CCeEEccCCcCCccCCC-----ccCc-CCCcEEEcCCCcccccCCCC------C-CCCccEEEccCCcCCC
Q 006903 148 LKRLDISNNNFSSELPD-----LSRI-SGLLTFFAENNQLRGGIPEF------D-FSNLLQFNVSNNNLSG 205 (626)
Q Consensus 148 L~~L~ls~N~l~g~~p~-----~~~~-~~L~~l~l~~N~l~g~ip~~------~-~~~L~~l~ls~N~l~g 205 (626)
|++|||++|.+++..+. +..+ ++|+.|++++|++++..+.. . .++|+.|++++|.+++
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 66666666666555443 2222 55666666666665443321 1 2356666666666553
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.11 E-value=3.4e-10 Score=117.93 Aligned_cols=142 Identities=11% Similarity=0.019 Sum_probs=94.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccE-EEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCC-----
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVV-LSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLN----- 146 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~-L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~----- 146 (626)
.+++.|+|++|.+.+.++...+..+++|+. +.++.|+++...|..|.++++|++|++++|++++..+..+....
T Consensus 54 ~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l 133 (350)
T 4ay9_X 54 GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 133 (350)
T ss_dssp TTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEE
T ss_pred CCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhh
Confidence 578899999999888887766777777654 66777888877777888888999999988888754443333322
Q ss_pred ---------------------CCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCc
Q 006903 147 ---------------------NLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNN 202 (626)
Q Consensus 147 ---------------------~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~ 202 (626)
.|+.|+|++|+|+...+.+....+|+.+++++|+..+.||.. .+++|+.|++++|+
T Consensus 134 ~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~ 213 (350)
T 4ay9_X 134 DIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR 213 (350)
T ss_dssp EEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSC
T ss_pred hhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCC
Confidence 355566666666654444445556666666655444556653 35567777777777
Q ss_pred CCCCCCCCCCCC
Q 006903 203 LSGPVPGVNGRL 214 (626)
Q Consensus 203 l~g~ip~~~~~~ 214 (626)
|+.-.+..+..+
T Consensus 214 l~~lp~~~~~~L 225 (350)
T 4ay9_X 214 IHSLPSYGLENL 225 (350)
T ss_dssp CCCCCSSSCTTC
T ss_pred cCccChhhhccc
Confidence 764333333333
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.06 E-value=2.8e-10 Score=112.87 Aligned_cols=129 Identities=13% Similarity=0.143 Sum_probs=96.2
Q ss_pred ccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCC--ccccceEEEeCCeEEEEEeecCCCChhHhh
Q 006903 355 GRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPN--VLPPLAYYCSKQEKLLVYEYQPNGSLFNLL 432 (626)
Q Consensus 355 G~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~n--Iv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l 432 (626)
+.|..+.||++...+|..+++|..... ....+.+|++.++.+.+.+ +.+++++....+..++||||++|.++. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 355569999998877888999997653 3356788999988886544 455788877777889999999998884 2
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc------------------------------------------------
Q 006903 433 HGSENGQSFDWGSRLRVAACVAKALALIHEEL------------------------------------------------ 464 (626)
Q Consensus 433 ~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~------------------------------------------------ 464 (626)
.. .+ ...++.++++.|..||..-
T Consensus 105 ~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 105 SH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp SC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred Cc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 11 11 2356777888888888421
Q ss_pred ------cCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 465 ------REDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 465 ------~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
....++|+|++|.||+++++..+.|.|||.+.
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 01239999999999999887666799999864
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.3e-09 Score=113.83 Aligned_cols=140 Identities=13% Similarity=0.205 Sum_probs=104.5
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcC--CCC--CCHHHHHHHHHHhccCC--CCCccccceEEEeC---CeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLR--DWS--ISSEDFKNRMQKIDHVK--HPNVLPPLAYYCSK---QEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~--~~~--~~~~~~~~ei~~l~~l~--H~nIv~l~g~~~~~---~~~~lv~Ey 422 (626)
+.++.|.++.||+....+ ..+++|+.. ... .....+.+|+++++.+. +..+.+++.++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 568999999999998764 578888876 332 23456888999998887 45577888877665 458999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL-------------------------------------- 464 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~-------------------------------------- 464 (626)
++|..+.+.. ...++...+..++.++++.|+.||..-
T Consensus 123 v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 123 VSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred cCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 9998775422 124678888999999999999999620
Q ss_pred ----------------cCCCceeccCCCCCeeeCCCCC--eEEeeccCccc
Q 006903 465 ----------------REDGIAHGNLKSNNILFNNNME--PCISEYGLIVT 497 (626)
Q Consensus 465 ----------------~~~~ivHrDlkp~NILl~~~~~--~kl~DFGl~~~ 497 (626)
....++|+|+++.|||++.++. +.|.||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 0256999999999999997753 58999998754
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.95 E-value=2.2e-11 Score=120.88 Aligned_cols=127 Identities=21% Similarity=0.244 Sum_probs=69.9
Q ss_pred CCCCCCcccEEecCCCCeEEEEEecC---CCceeccCccccC-----------------------CCCCccE--EEcccC
Q 006903 57 DPCSGKWVGVTCDSRQKSVRKIVLDG---FNLSGILDTTSVC-----------------------KTQSLVV--LSLEEN 108 (626)
Q Consensus 57 ~~c~~~w~gv~c~~~~~~v~~l~L~~---~~l~g~~~~~~~~-----------------------~l~~L~~--L~ls~N 108 (626)
..| +|.|+.|+....+|..+...+ ..+.|.+.+..+. ..+.|.. ++++.|
T Consensus 76 ~l~--~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALK--AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHH--HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHH--hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 357 699999987666776666655 3344444432211 1112222 334444
Q ss_pred CCc---ccCCccccCCCCCcEEEeecccccc--ccChhhhcCCCCCeEEccCCcCCccCCCccCcC--CCcEEEcCCCcc
Q 006903 109 NIA---GTVSQEISNCKQLTHLYVGRNKLSG--NLPDSLSKLNNLKRLDISNNNFSSELPDLSRIS--GLLTFFAENNQL 181 (626)
Q Consensus 109 ~l~---g~~p~~~~~l~~L~~L~l~~N~l~g--~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~--~L~~l~l~~N~l 181 (626)
... +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|||++|+|++. ..+..+. +|+.|++++|.+
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTSTT
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCcC
Confidence 211 1111111346667777777777766 5556666677777777777777654 2222222 666666666666
Q ss_pred cccCC
Q 006903 182 RGGIP 186 (626)
Q Consensus 182 ~g~ip 186 (626)
.+.+|
T Consensus 233 ~~~~~ 237 (267)
T 3rw6_A 233 CDTFR 237 (267)
T ss_dssp GGGCS
T ss_pred ccccC
Confidence 66665
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.93 E-value=4e-11 Score=129.63 Aligned_cols=138 Identities=18% Similarity=0.178 Sum_probs=102.8
Q ss_pred CeEEEEEecCCCceecc----CccccCCCCCccEEEcccCCCccc----CCccccCCCCCcEEEeeccccccccChhhhc
Q 006903 73 KSVRKIVLDGFNLSGIL----DTTSVCKTQSLVVLSLEENNIAGT----VSQEISNCKQLTHLYVGRNKLSGNLPDSLSK 144 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~----~~~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~ 144 (626)
.+++.|+|++|.+++.- .+.....+++|+.|+|++|++++. +|..+.++++|++|+|++|.+++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 56888999999887531 111223578899999999999875 6777788899999999999987665555543
Q ss_pred C-----CCCCeEEccCCcCCcc----CCC-ccCcCCCcEEEcCCCcccccCCCC-------CCCCccEEEccCCcCCC--
Q 006903 145 L-----NNLKRLDISNNNFSSE----LPD-LSRISGLLTFFAENNQLRGGIPEF-------DFSNLLQFNVSNNNLSG-- 205 (626)
Q Consensus 145 l-----~~L~~L~ls~N~l~g~----~p~-~~~~~~L~~l~l~~N~l~g~ip~~-------~~~~L~~l~ls~N~l~g-- 205 (626)
. ++|+.|+|++|.+++. +|. +..+++|+.|++++|.+++..+.. ..++|+.|++++|.+++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 3 6899999999998875 333 567788999999999887654331 15688999999998876
Q ss_pred --CCCCC
Q 006903 206 --PVPGV 210 (626)
Q Consensus 206 --~ip~~ 210 (626)
.+|..
T Consensus 387 ~~~l~~~ 393 (461)
T 1z7x_W 387 CSSLAAT 393 (461)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 56654
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.86 E-value=2.7e-10 Score=123.09 Aligned_cols=134 Identities=16% Similarity=0.178 Sum_probs=94.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcc----cCCccccCCCCCcEEEeeccccccccChhhh-cCC-
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAG----TVSQEISNCKQLTHLYVGRNKLSGNLPDSLS-KLN- 146 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~-~l~- 146 (626)
.+++.|+|++++++.......+..+++|+.|+|++|++++ .+|..+..+++|++|+|++|.++...+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 3678888888887654322225567788888888888875 3566677788888888888888765555543 355
Q ss_pred ---CCCeEEccCCcCCc----cCCC-ccCcCCCcEEEcCCCcccccCCCC-------CCCCccEEEccCCcCCCC
Q 006903 147 ---NLKRLDISNNNFSS----ELPD-LSRISGLLTFFAENNQLRGGIPEF-------DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 147 ---~L~~L~ls~N~l~g----~~p~-~~~~~~L~~l~l~~N~l~g~ip~~-------~~~~L~~l~ls~N~l~g~ 206 (626)
+|++|+|++|+++. .+|. +..+++|+.|++++|.+++..+.. ..++|+.|++++|.+++.
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~ 157 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAA 157 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGG
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHH
Confidence 68888888888874 4454 777888888888888877543321 244688888888887753
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.84 E-value=2.5e-10 Score=119.96 Aligned_cols=133 Identities=17% Similarity=0.163 Sum_probs=84.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccc-----cCCCCCcEEEeecccccc----ccChhhh
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEI-----SNCKQLTHLYVGRNKLSG----NLPDSLS 143 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~-----~~l~~L~~L~l~~N~l~g----~ip~~~~ 143 (626)
..++.|+|++|+++..-.......+++|+.|+|++|+++......+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 3677888888877542211112234567888888887765433333 245678888888888764 3445556
Q ss_pred cCCCCCeEEccCCcCCccC----CC-ccCcCCCcEEEcCCCcccccC----CCC--CCCCccEEEccCCcCCC
Q 006903 144 KLNNLKRLDISNNNFSSEL----PD-LSRISGLLTFFAENNQLRGGI----PEF--DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 144 ~l~~L~~L~ls~N~l~g~~----p~-~~~~~~L~~l~l~~N~l~g~i----p~~--~~~~L~~l~ls~N~l~g 205 (626)
.+++|++|||++|.|+..- +. +...++|+.|++++|.++..- +.. ..++|+.|++++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 7778888888888876431 22 555667888888888876421 111 24678888888887753
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.69 E-value=1.1e-08 Score=104.30 Aligned_cols=184 Identities=17% Similarity=0.208 Sum_probs=116.5
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CCCc--cccceEEEeCC---eEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNV--LPPLAYYCSKQ---EKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~nI--v~l~g~~~~~~---~~~lv~Ey~~~ 425 (626)
+.++.|.+..||+.. ..+++|..... .....+.+|.+.++.+. +..+ .+.+......+ ..|+||||++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 568999999999864 45888886532 23457889999998874 3332 23333322222 34889999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh------------------------------------------
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE------------------------------------------ 463 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~------------------------------------------ 463 (626)
.++.+... ..++..++..++.++++.++.||..
T Consensus 101 ~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 101 VPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp EECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred eECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 88765332 2356777788888888888888851
Q ss_pred -----cc-------CCCceeccCCCCCeeeCC--CCCeEEeeccCccccCCCccccccccc---cchh---hccccC-CC
Q 006903 464 -----LR-------EDGIAHGNLKSNNILFNN--NMEPCISEYGLIVTENHDQSFLAQTSS---LKIN---DISNQM-CS 522 (626)
Q Consensus 464 -----~~-------~~~ivHrDlkp~NILl~~--~~~~kl~DFGl~~~~~~~~~~~~~~~~---~~~p---e~~~~~-~~ 522 (626)
+. ...++|+|++|.||++++ ...+.|.||+.+............... +..+ ...... ..
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 10 135899999999999998 456789999987543221110000000 1110 000000 00
Q ss_pred ---------CCcchhHHHHHHHHHHHcCCCCC
Q 006903 523 ---------TIKADVYGFGVILLELLTGKLVQ 545 (626)
Q Consensus 523 ---------~~k~DVwSfGvvl~elltg~~p~ 545 (626)
....+.|+++.++|++.+|..++
T Consensus 256 ~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 256 DIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11258999999999999998654
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.60 E-value=3.5e-09 Score=118.14 Aligned_cols=87 Identities=14% Similarity=0.079 Sum_probs=40.8
Q ss_pred ccCCCCCcEEEeec--cccccccChhhhc-CCCCCeEEccCCcCCc-cCCC-ccCcCCCcEEEcCCCccccc-CCCC--C
Q 006903 118 ISNCKQLTHLYVGR--NKLSGNLPDSLSK-LNNLKRLDISNNNFSS-ELPD-LSRISGLLTFFAENNQLRGG-IPEF--D 189 (626)
Q Consensus 118 ~~~l~~L~~L~l~~--N~l~g~ip~~~~~-l~~L~~L~ls~N~l~g-~~p~-~~~~~~L~~l~l~~N~l~g~-ip~~--~ 189 (626)
+.++++|+.|+|++ |.+++..+..+.. +++|++|+|++|++++ .++. +..+++|+.|++++|.+++. ++.. .
T Consensus 432 ~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~ 511 (592)
T 3ogk_B 432 LIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTK 511 (592)
T ss_dssp HHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHH
T ss_pred HHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHh
Confidence 33445555555542 2244444444432 5555555555555554 2233 34455555555555555433 2211 2
Q ss_pred CCCccEEEccCCcCC
Q 006903 190 FSNLLQFNVSNNNLS 204 (626)
Q Consensus 190 ~~~L~~l~ls~N~l~ 204 (626)
+++|+.|++++|+++
T Consensus 512 l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 512 LPSLRYLWVQGYRAS 526 (592)
T ss_dssp CSSCCEEEEESCBCC
T ss_pred cCccCeeECcCCcCC
Confidence 455555555555554
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.54 E-value=3e-09 Score=111.61 Aligned_cols=133 Identities=17% Similarity=0.163 Sum_probs=98.4
Q ss_pred CeEEEEEecCCCceeccCc---cccC-CCCCccEEEcccCCCcccCCccc-cCCCCCcEEEeeccccccccChhhh----
Q 006903 73 KSVRKIVLDGFNLSGILDT---TSVC-KTQSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSLS---- 143 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~---~~~~-~l~~L~~L~ls~N~l~g~~p~~~-~~l~~L~~L~l~~N~l~g~ip~~~~---- 143 (626)
..++.|+|++|.++..-.. ..+. ...+|+.|+|++|.++......+ ..+++|+.|+|++|+|+..-...+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4688999999999753211 1122 33689999999999976544344 3567899999999999865444442
Q ss_pred -cCCCCCeEEccCCcCCcc----CCC-ccCcCCCcEEEcCCCcccccC----CC--CCCCCccEEEccCCcCCC
Q 006903 144 -KLNNLKRLDISNNNFSSE----LPD-LSRISGLLTFFAENNQLRGGI----PE--FDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 144 -~l~~L~~L~ls~N~l~g~----~p~-~~~~~~L~~l~l~~N~l~g~i----p~--~~~~~L~~l~ls~N~l~g 205 (626)
..++|+.|+|++|.|+.. ++. +...++|++|++++|.++..- +. ...++|+.|++++|.++.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 468999999999999752 222 567889999999999997531 21 135689999999999874
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.46 E-value=1e-07 Score=94.49 Aligned_cols=78 Identities=23% Similarity=0.353 Sum_probs=64.3
Q ss_pred CCCCccEEEcccCCCcc--cCCccccCCCCCcEEEeeccccccccChhhhcCC--CCCeEEccCCcCCccCCC-------
Q 006903 96 KTQSLVVLSLEENNIAG--TVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLN--NLKRLDISNNNFSSELPD------- 164 (626)
Q Consensus 96 ~l~~L~~L~ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~--~L~~L~ls~N~l~g~~p~------- 164 (626)
.+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 57899999999999998 6777788999999999999999975 4466565 999999999999998873
Q ss_pred -ccCcCCCcEEE
Q 006903 165 -LSRISGLLTFF 175 (626)
Q Consensus 165 -~~~~~~L~~l~ 175 (626)
+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 34556665554
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-07 Score=105.54 Aligned_cols=135 Identities=12% Similarity=0.081 Sum_probs=84.9
Q ss_pred eEEEEEecCCC-cee-ccCccccCCCCCccEEEcccCCCccc----CCccccCCCCCcEEEeeccccc----cccChhhh
Q 006903 74 SVRKIVLDGFN-LSG-ILDTTSVCKTQSLVVLSLEENNIAGT----VSQEISNCKQLTHLYVGRNKLS----GNLPDSLS 143 (626)
Q Consensus 74 ~v~~l~L~~~~-l~g-~~~~~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~----g~ip~~~~ 143 (626)
+++.|+|+++. ++. .++ .....+++|+.|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.
T Consensus 139 ~L~~L~L~~~~~~~~~~l~-~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLL-SIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHH-HHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHH-HHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 38888888775 221 111 1223678888888888888765 4445567788888888888887 45566667
Q ss_pred cCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCccc---ccCCC--CCCCCccEEEccCCcCCCCCCCC
Q 006903 144 KLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLR---GGIPE--FDFSNLLQFNVSNNNLSGPVPGV 210 (626)
Q Consensus 144 ~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~---g~ip~--~~~~~L~~l~ls~N~l~g~ip~~ 210 (626)
++++|+.|+|++|.+++....+..+++|+.|+++.+... +..+. ..+++|+.|+++++ ..+.+|..
T Consensus 218 ~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~-~~~~l~~~ 288 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM-GPNEMPIL 288 (592)
T ss_dssp HCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC-CTTTGGGG
T ss_pred hCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCcccc-chhHHHHH
Confidence 888888888888888773333667777777777643222 11111 13456666666653 23344443
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.27 E-value=1.9e-07 Score=87.76 Aligned_cols=110 Identities=17% Similarity=0.236 Sum_probs=61.5
Q ss_pred cCCCCCccEEEcccC-CCccc----CCccccCCCCCcEEEeecccccc----ccChhhhcCCCCCeEEccCCcCCcc---
Q 006903 94 VCKTQSLVVLSLEEN-NIAGT----VSQEISNCKQLTHLYVGRNKLSG----NLPDSLSKLNNLKRLDISNNNFSSE--- 161 (626)
Q Consensus 94 ~~~l~~L~~L~ls~N-~l~g~----~p~~~~~l~~L~~L~l~~N~l~g----~ip~~~~~l~~L~~L~ls~N~l~g~--- 161 (626)
+...++|+.|+|++| .++.. +...+...++|++|+|++|+++. .+...+...+.|++|||++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 344556666666666 65532 22334555666666666666643 2334445556677777777766542
Q ss_pred -C-CCccCcCCCcEEEc--CCCcccccCCC----C--CCCCccEEEccCCcC
Q 006903 162 -L-PDLSRISGLLTFFA--ENNQLRGGIPE----F--DFSNLLQFNVSNNNL 203 (626)
Q Consensus 162 -~-p~~~~~~~L~~l~l--~~N~l~g~ip~----~--~~~~L~~l~ls~N~l 203 (626)
+ ..+...+.|++|++ ++|.++..-.. . ..++|+.|++++|.+
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 1 12455556677777 56666532111 0 245677777777765
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.26 E-value=3.2e-06 Score=86.83 Aligned_cols=37 Identities=8% Similarity=0.329 Sum_probs=25.9
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCc
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIA 111 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~ 111 (626)
.+++.|+|++ +++. |+...+..+++|+.|+|++|.+.
T Consensus 101 ~~L~~l~L~~-~i~~-I~~~aF~~~~~L~~l~l~~n~i~ 137 (329)
T 3sb4_A 101 QTLEKVILSE-KIKN-IEDAAFKGCDNLKICQIRKKTAP 137 (329)
T ss_dssp TTCCC-CBCT-TCCE-ECTTTTTTCTTCCEEEBCCSSCC
T ss_pred CCCcEEECCc-cccc-hhHHHhhcCcccceEEcCCCCcc
Confidence 4577788877 6664 44456777888888888888764
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.21 E-value=6.4e-08 Score=107.80 Aligned_cols=132 Identities=10% Similarity=0.077 Sum_probs=77.8
Q ss_pred CeEEEEEec---------CCCceeccCccccCCCCCccEEEcccCCCcccCCcccc-CCCCCcEEEee--c----ccccc
Q 006903 73 KSVRKIVLD---------GFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEIS-NCKQLTHLYVG--R----NKLSG 136 (626)
Q Consensus 73 ~~v~~l~L~---------~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~--~----N~l~g 136 (626)
.+++.|+|. .+.+++.........+++|+.|+++.|++++..+..+. ++++|+.|+|+ + |++++
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 457777773 23444321111112366777777777777766555554 47777777777 3 55552
Q ss_pred -----ccChhhhcCCCCCeEEccCCcCCccCCC-ccC-cCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCCC
Q 006903 137 -----NLPDSLSKLNNLKRLDISNNNFSSELPD-LSR-ISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 137 -----~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~-~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~g 205 (626)
.++..+..+++|+.|+|++ ++++..+. +.. +++|+.|++++|.+++..+.. .+++|+.|++++|.+++
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 2223356677777777766 55543332 443 667777777777776543321 36777777777777743
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=4.6e-06 Score=84.81 Aligned_cols=136 Identities=15% Similarity=0.085 Sum_probs=92.1
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCC---CccccceEEE-eCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHP---NVLPPLAYYC-SKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~---nIv~l~g~~~-~~~~~~lv~Ey~~~g~ 427 (626)
+.++.|....||+. |..+++|.-.. ......+.+|.++|+.+.+. .+.+.+.+.. ..+..++||||++|..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 56788888899987 56688888532 12235788999999988753 2445555553 3455789999999988
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc-------------------------------------------
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL------------------------------------------- 464 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~------------------------------------------- 464 (626)
+.+... ..++...+..++.++++.|+.||..-
T Consensus 100 l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 100 LGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp CHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred Cchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 766321 12344455555566666665555310
Q ss_pred -------------cCCCceeccCCCCCeeeCC---CCCe-EEeeccCccc
Q 006903 465 -------------REDGIAHGNLKSNNILFNN---NMEP-CISEYGLIVT 497 (626)
Q Consensus 465 -------------~~~~ivHrDlkp~NILl~~---~~~~-kl~DFGl~~~ 497 (626)
....++|+|+++.||+++. ++.+ .|.||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1335799999999999997 4554 7999997643
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.03 E-value=6.2e-07 Score=84.14 Aligned_cols=110 Identities=17% Similarity=0.199 Sum_probs=84.8
Q ss_pred CeEEEEEecCC-Cceec--c-CccccCCCCCccEEEcccCCCccc----CCccccCCCCCcEEEeeccccccc----cCh
Q 006903 73 KSVRKIVLDGF-NLSGI--L-DTTSVCKTQSLVVLSLEENNIAGT----VSQEISNCKQLTHLYVGRNKLSGN----LPD 140 (626)
Q Consensus 73 ~~v~~l~L~~~-~l~g~--~-~~~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~----ip~ 140 (626)
..++.|+|++| ++... . -...+...++|+.|+|++|+++.. +...+...+.|++|+|++|.++.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 57899999999 88632 1 012455678899999999999753 334456678999999999999754 556
Q ss_pred hhhcCCCCCeEEc--cCCcCCccCC-----CccCcCCCcEEEcCCCccc
Q 006903 141 SLSKLNNLKRLDI--SNNNFSSELP-----DLSRISGLLTFFAENNQLR 182 (626)
Q Consensus 141 ~~~~l~~L~~L~l--s~N~l~g~~p-----~~~~~~~L~~l~l~~N~l~ 182 (626)
.+...+.|++|+| ++|.|+..-- .+...++|+.|++++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 6788899999999 8899975421 2555688999999999885
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=97.97 E-value=2.1e-06 Score=95.48 Aligned_cols=104 Identities=14% Similarity=0.151 Sum_probs=77.5
Q ss_pred CCCCccEEEcccCCCcccCCcccc-CCCCCcEEEeecc-ccccc-cChhhhcCCCCCeEEccCCcCCccCCC-----ccC
Q 006903 96 KTQSLVVLSLEENNIAGTVSQEIS-NCKQLTHLYVGRN-KLSGN-LPDSLSKLNNLKRLDISNNNFSSELPD-----LSR 167 (626)
Q Consensus 96 ~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N-~l~g~-ip~~~~~l~~L~~L~ls~N~l~g~~p~-----~~~ 167 (626)
.+++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+. ...
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 567899999999988887777775 6889999999988 55433 555556889999999999988765432 236
Q ss_pred cCCCcEEEcCCCcccccCCCC-------CCCCccEEEccCC
Q 006903 168 ISGLLTFFAENNQLRGGIPEF-------DFSNLLQFNVSNN 201 (626)
Q Consensus 168 ~~~L~~l~l~~N~l~g~ip~~-------~~~~L~~l~ls~N 201 (626)
+++|+.|++++|. +.++.. .+++|+.|++++|
T Consensus 183 ~~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 183 YTSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred CCcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 6789999998886 233221 3688899998887
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=1.9e-05 Score=78.43 Aligned_cols=136 Identities=16% Similarity=0.240 Sum_probs=93.4
Q ss_pred cccccCCCc-ceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHG-SLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.+..|..| .||+.... ++..+.+|+-... ...++.+|...|+.+. +--+-++++++.+.+..++|||++++.++
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 345556666 58988754 4667889976432 2456788988887764 22356678888888899999999999887
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh---------------------------------------------
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE--------------------------------------------- 463 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~--------------------------------------------- 463 (626)
.+.... .......++.+++..|+-||..
T Consensus 108 ~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 108 FQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 765431 1122334556666666666631
Q ss_pred ------c---cCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 464 ------L---REDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 464 ------~---~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
. ....++|+|+.+.|||+++++.+-|.||+.+.
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 0 01137999999999999987767799998764
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.89 E-value=6.1e-05 Score=77.25 Aligned_cols=141 Identities=13% Similarity=0.243 Sum_probs=80.9
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-----CCCccccc-e--EEEeCCeEEEEEeec
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-----HPNVLPPL-A--YYCSKQEKLLVYEYQ 423 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-----H~nIv~l~-g--~~~~~~~~~lv~Ey~ 423 (626)
+.|+.|..+.||+....+| .+++|+... ...++..|..+++.+. .|.++... | +....+..+++|||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR---PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS---CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC---CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 4566677899999987665 488998875 2344445555554442 34444321 1 123456789999999
Q ss_pred CCCChh--------------HhhcC----CC-C-C-----CCCCHHHHH-------------------------------
Q 006903 424 PNGSLF--------------NLLHG----SE-N-G-----QSFDWGSRL------------------------------- 447 (626)
Q Consensus 424 ~~g~L~--------------~~l~~----~~-~-~-----~~l~~~~~~------------------------------- 447 (626)
+|..+. ..+|. .. . . ..-.|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11121 00 0 0 012343211
Q ss_pred HHHHHHHHHHHHHHH--------h-ccCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 448 RVAACVAKALALIHE--------E-LREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 448 ~i~~~ia~gL~ylH~--------~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
.+...+.+++.+|+. . .....++|+|+++.|||++.++.+.|.||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123345666653 1 025789999999999999888889999998753
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=1.3e-05 Score=83.06 Aligned_cols=79 Identities=8% Similarity=-0.019 Sum_probs=54.3
Q ss_pred ccc-ccCCCcceEEEEeC-------CCcEEEEEEcCCCC---C-CHHHHHHHHHHhccCCC---CCccccceEEEeC---
Q 006903 352 ELL-GRGKHGSLYRVVLD-------DGLMLAVKRLRDWS---I-SSEDFKNRMQKIDHVKH---PNVLPPLAYYCSK--- 413 (626)
Q Consensus 352 ~~l-G~G~fG~Vy~~~~~-------~g~~vAvK~l~~~~---~-~~~~~~~ei~~l~~l~H---~nIv~l~g~~~~~--- 413 (626)
+.| +.|....+|+.... ++..+++|...... . ....+.+|+.+++.+.. -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88889999998764 26788899865432 1 23567788888877742 2456667766544
Q ss_pred CeEEEEEeecCCCChhH
Q 006903 414 QEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 414 ~~~~lv~Ey~~~g~L~~ 430 (626)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 34689999999876543
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.87 E-value=5.2e-06 Score=86.37 Aligned_cols=109 Identities=16% Similarity=0.181 Sum_probs=67.1
Q ss_pred cCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhh--cCCCCCeEEccC--CcCCcc--C----C
Q 006903 94 VCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLS--KLNNLKRLDISN--NNFSSE--L----P 163 (626)
Q Consensus 94 ~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~--~l~~L~~L~ls~--N~l~g~--~----p 163 (626)
+..+++|+.|+|++|.- -.+|. +. +++|+.|+|..+.++...-..+. .+++|+.|+|+. |+..|. + +
T Consensus 168 l~~~P~L~~L~L~g~~~-l~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~ 244 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNN-LSIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP 244 (362)
T ss_dssp HHTCTTCCEEEEECCBT-CBCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG
T ss_pred HhcCCCCcEEEEeCCCC-ceecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH
Confidence 34567788888877631 12443 33 67788888887777644434444 678888888753 332222 1 1
Q ss_pred Cc--cCcCCCcEEEcCCCcccccCCC-----CCCCCccEEEccCCcCCC
Q 006903 164 DL--SRISGLLTFFAENNQLRGGIPE-----FDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 164 ~~--~~~~~L~~l~l~~N~l~g~ip~-----~~~~~L~~l~ls~N~l~g 205 (626)
.+ ..+++|+.|++.+|.+....+. ..+++|+.|+++.|.+++
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 12 2467788888888877643321 136778888888887765
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.84 E-value=1.3e-05 Score=83.39 Aligned_cols=127 Identities=17% Similarity=0.222 Sum_probs=77.9
Q ss_pred CeEEEEEecCCC-ceeccCccccCCCCCccEEEcccCCCcccCCcccc--CCCCCcEEEeec--cccccc-----cChhh
Q 006903 73 KSVRKIVLDGFN-LSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEIS--NCKQLTHLYVGR--NKLSGN-----LPDSL 142 (626)
Q Consensus 73 ~~v~~l~L~~~~-l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~--~l~~L~~L~l~~--N~l~g~-----ip~~~ 142 (626)
++++.|+|+++. + .+++ + .+++|+.|+|..|.++......+. .+++|+.|+|+. |...|. +...+
T Consensus 172 P~L~~L~L~g~~~l--~l~~--~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL--SIGK--K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp TTCCEEEEECCBTC--BCCS--C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCcEEEEeCCCCc--eecc--c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 467778887762 2 2222 2 367788888887776544333343 678888888763 222222 11112
Q ss_pred --hcCCCCCeEEccCCcCCccCCC-c---cCcCCCcEEEcCCCccccc----CCCC--CCCCccEEEccCCcCC
Q 006903 143 --SKLNNLKRLDISNNNFSSELPD-L---SRISGLLTFFAENNQLRGG----IPEF--DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 143 --~~l~~L~~L~ls~N~l~g~~p~-~---~~~~~L~~l~l~~N~l~g~----ip~~--~~~~L~~l~ls~N~l~ 204 (626)
..+++|+.|+|++|.++...+. + ..+++|++|+++.|.+++. ++.. .+++|+.|++++|.++
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 2467888888888887654322 2 2467788888888887763 3322 3677888888877764
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.80 E-value=3.1e-05 Score=79.39 Aligned_cols=98 Identities=13% Similarity=0.097 Sum_probs=74.8
Q ss_pred CCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCC-eEEccCCcCCccCCC-ccCcCCCcEE
Q 006903 97 TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLK-RLDISNNNFSSELPD-LSRISGLLTF 174 (626)
Q Consensus 97 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~-~L~ls~N~l~g~~p~-~~~~~~L~~l 174 (626)
+++|+.|+|++|+++..-+..|.+|++|+.|+|++| ++..-+..|.++.+|+ .|+|.+ +++..-+. |..+++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 678999999998888655567889999999999988 6644445688899998 999988 66655444 8889999999
Q ss_pred EcCCCcccccCCCC---CCCCccEEE
Q 006903 175 FAENNQLRGGIPEF---DFSNLLQFN 197 (626)
Q Consensus 175 ~l~~N~l~g~ip~~---~~~~L~~l~ 197 (626)
++++|+++. |+.. .+++|+.+.
T Consensus 303 ~l~~n~i~~-I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITT-LGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCE-ECTTTTCTTCCCCEEE
T ss_pred EeCCCccCc-cchhhhcCCcchhhhc
Confidence 998888873 4433 356676654
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00016 Score=76.04 Aligned_cols=73 Identities=10% Similarity=0.169 Sum_probs=48.4
Q ss_pred cccccCCCcceEEEEeC-CCcEEEEEEcCCCC--------CCHHHHHHHHHHhccCCC--CCcc-ccceEEEeCCeEEEE
Q 006903 352 ELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--------ISSEDFKNRMQKIDHVKH--PNVL-PPLAYYCSKQEKLLV 419 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--------~~~~~~~~ei~~l~~l~H--~nIv-~l~g~~~~~~~~~lv 419 (626)
+.||.|.++.||++... +++.++||...... ...+.+..|.++++.+.. |..+ +++. .+.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~--~d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY--SDTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE--EETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEE--EcCCccEEE
Confidence 57999999999999754 46889999764321 123456788888877632 3333 4443 245567899
Q ss_pred EeecCCC
Q 006903 420 YEYQPNG 426 (626)
Q Consensus 420 ~Ey~~~g 426 (626)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999864
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0004 Score=69.58 Aligned_cols=73 Identities=25% Similarity=0.274 Sum_probs=52.5
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCC---ccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPN---VLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~n---Iv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
+.+|.|..+.||+..+.||+.|.+|+-.... .....|.+|...|+.+.-.. +.+.+++ +..++||||++.+.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 5689999999999999999999999876443 23356889999888774221 2233332 23478999998764
Q ss_pred h
Q 006903 428 L 428 (626)
Q Consensus 428 L 428 (626)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00034 Score=70.94 Aligned_cols=138 Identities=16% Similarity=0.154 Sum_probs=90.3
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC---CCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK---HPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~---H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.|+.|.+..+|+.... +..+++|..... ....+..|.+.|+.+. ...+.+++.+....+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 56899999999998864 667889987542 3567888988887774 35677888887777889999999998764
Q ss_pred hH-----------hhcCCCC--C-----------------CCCCHHHHH---HHHH--HH-----------HHHHHHHHH
Q 006903 429 FN-----------LLHGSEN--G-----------------QSFDWGSRL---RVAA--CV-----------AKALALIHE 462 (626)
Q Consensus 429 ~~-----------~l~~~~~--~-----------------~~l~~~~~~---~i~~--~i-----------a~gL~ylH~ 462 (626)
.. .||.... . ..-+|.... ++.. +. .+.++.+..
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 21 2232111 0 012465332 1111 11 112222222
Q ss_pred hc----cCCCceeccCCCCCeeeCCCCCeEEeecc
Q 006903 463 EL----REDGIAHGNLKSNNILFNNNMEPCISEYG 493 (626)
Q Consensus 463 ~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFG 493 (626)
.+ ..+.+||+|+.+.|++++.++ +.|.||.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 22 146799999999999999887 8898974
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0011 Score=70.38 Aligned_cols=31 Identities=10% Similarity=0.322 Sum_probs=27.4
Q ss_pred CCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 466 ~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
...++|+|++|.|||++.++ ++|.||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 57899999999999999876 99999998754
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0023 Score=65.08 Aligned_cols=142 Identities=13% Similarity=0.152 Sum_probs=83.4
Q ss_pred ccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCC--ccccceE-----EEeCCeEEEEEeecCC
Q 006903 353 LLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPN--VLPPLAY-----YCSKQEKLLVYEYQPN 425 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~n--Iv~l~g~-----~~~~~~~~lv~Ey~~~ 425 (626)
.++ |....||+....+|+.+++|.........+.+..|..+++.+.... +.+++.. ....+..+++|||++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 456 7788999988777878999998754445667778888777664211 3334332 2234567889999987
Q ss_pred CChh-----H------h---hcC----CC--CCCCCCHHHH----HHH---------------HHHHHHHHHHHHHhc--
Q 006903 426 GSLF-----N------L---LHG----SE--NGQSFDWGSR----LRV---------------AACVAKALALIHEEL-- 464 (626)
Q Consensus 426 g~L~-----~------~---l~~----~~--~~~~l~~~~~----~~i---------------~~~ia~gL~ylH~~~-- 464 (626)
..+. . . +|. .. ....+++... ..+ ...+...+..+....
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5432 0 0 111 00 0112333211 001 111122233343322
Q ss_pred -cCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 465 -REDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 465 -~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
....++|+|+++.|||++ + .+.|.||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 245689999999999999 4 889999987643
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0029 Score=66.50 Aligned_cols=121 Identities=14% Similarity=0.203 Sum_probs=73.4
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.+.|.++ +. .|+...+..+++|+.++|..| ++..-...|.+ .+|+.+.| .|.++-.-+..|.+|++|+.+++
T Consensus 204 ~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 204 GIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEE
T ss_pred ccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEe
Confidence 4666777633 44 344445667778888888764 44333344555 67778877 34455333455777788888888
Q ss_pred cCCcCCc----cCCC--ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCC
Q 006903 154 SNNNFSS----ELPD--LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNN 201 (626)
Q Consensus 154 s~N~l~g----~~p~--~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N 201 (626)
.+|.+.. .++. |..+++|+.+.+.++ ++ .|+.. .+++|+.+++..|
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~~-i~-~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIPES-IR-ILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCCSCCEEEECTT
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeCCc-eE-EEhhhhhcCCCCccEEEECcc
Confidence 7777651 2332 677777777777743 33 34433 3566777777544
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0025 Score=67.02 Aligned_cols=123 Identities=17% Similarity=0.201 Sum_probs=82.3
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.|.|.+ ++.- |+...+..+.+|+.++|++|+++- ||...-.+.+|+.+.|..| ++-.-...|.++++|+.++|
T Consensus 158 ~L~~i~lp~-~l~~-I~~~aF~~c~~L~~l~l~~n~l~~-I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQ-LKEDIFYYCYNLKKADLSKTKITK-LPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCCE-ECSSTTTTCTTCCEEECTTSCCSE-ECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-CccE-ehHHHhhCcccCCeeecCCCcceE-echhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 477788875 5543 344467788999999999999885 5544444788999999854 65333456788899999998
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~ 204 (626)
..| ++..-.. |.. .+|+.+.+.++ ++ .|+.. .+++|+.+++.+|.+.
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~lp~~-i~-~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKLPNG-VT-NIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEEETT-CC-EECTTTTTTCTTCCEEEEESSCCC
T ss_pred CCC-ccCcccccccc-CCccEEEeCCC-cc-EEChhHhhCCCCCCEEEeCCcccc
Confidence 875 4333232 444 67888877433 33 34332 4667888888777664
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0019 Score=65.52 Aligned_cols=143 Identities=12% Similarity=0.157 Sum_probs=80.0
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-----CCCccccc-e--EEEeCCeEEEEEeec
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-----HPNVLPPL-A--YYCSKQEKLLVYEYQ 423 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-----H~nIv~l~-g--~~~~~~~~~lv~Ey~ 423 (626)
+.|+.|....+|+....+| .+++|..... ...+++..|+.+++.+. -|.++... | +....+..+++|||+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 4577788889999987666 5788987652 22345666777766553 23333211 1 112345678999999
Q ss_pred CCCChhH--------------hhcCC----CCCC-----CCCHHHHHH------------HHHHHHHHHHHHHHhcc---
Q 006903 424 PNGSLFN--------------LLHGS----ENGQ-----SFDWGSRLR------------VAACVAKALALIHEELR--- 465 (626)
Q Consensus 424 ~~g~L~~--------------~l~~~----~~~~-----~l~~~~~~~------------i~~~ia~gL~ylH~~~~--- 465 (626)
+|..+.. .+|.. .... ...|..... +...+...+.++++...
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 9865321 11110 0000 012332111 01124455666654321
Q ss_pred CCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 466 ~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
..+++|+|+.+.|||++++..+.|.||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3479999999999999987656799998753
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0018 Score=65.15 Aligned_cols=70 Identities=11% Similarity=0.011 Sum_probs=41.5
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCcc-ccceEEEeCCeEEEEEeec-CCCCh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVL-PPLAYYCSKQEKLLVYEYQ-PNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv-~l~g~~~~~~~~~lv~Ey~-~~g~L 428 (626)
+.|+.|....+|+. ..+++|+.........+..+|...++.+....+. +++++ ..+.-++++||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 56888999999998 4588888764321112235677666655432333 44433 344467899999 55333
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=96.78 E-value=0.00069 Score=62.21 Aligned_cols=82 Identities=16% Similarity=0.075 Sum_probs=36.4
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCC-CcccCCccccCC----CCCcEEEeeccc-cccccChhhhcCCC
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENN-IAGTVSQEISNC----KQLTHLYVGRNK-LSGNLPDSLSKLNN 147 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~g~ip~~~~~l~~ 147 (626)
+++.|||++..++..-- ..+..+++|+.|+|+++. ++..--..+..+ ++|++|+|+++. +|-.-=..+.++++
T Consensus 62 ~L~~LDLs~~~Itd~GL-~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGF-DHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CEEEEEEESCCCCGGGG-GGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred eEeEEeCcCCCccHHHH-HHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 45666666555432110 124455555555555553 433222223332 245555555542 43221123445555
Q ss_pred CCeEEccCC
Q 006903 148 LKRLDISNN 156 (626)
Q Consensus 148 L~~L~ls~N 156 (626)
|+.|+|++.
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555544
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0019 Score=56.26 Aligned_cols=36 Identities=25% Similarity=0.353 Sum_probs=19.4
Q ss_pred CCcEEEeeccccccccChhhhcCCCCCeEEccCCcC
Q 006903 123 QLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158 (626)
Q Consensus 123 ~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l 158 (626)
+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 355555555555532233345566666666666655
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0085 Score=62.34 Aligned_cols=141 Identities=12% Similarity=0.146 Sum_probs=82.4
Q ss_pred cccccCCCcceEEEEeC--------CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCc-cccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLD--------DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV-LPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nI-v~l~g~~~~~~~~~lv~Ey 422 (626)
+.+..|-...+|++... +++.+.+|+............+|.++++.+.-..+ .++++++. + .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEEEE
Confidence 45777888899998865 24789999864433345677789988877743233 44555443 3 289999
Q ss_pred cCCCChhH-----------------hhcCCCC--CCCCC--HHHHHHHHHHHH-------------------HHHHHHHH
Q 006903 423 QPNGSLFN-----------------LLHGSEN--GQSFD--WGSRLRVAACVA-------------------KALALIHE 462 (626)
Q Consensus 423 ~~~g~L~~-----------------~l~~~~~--~~~l~--~~~~~~i~~~ia-------------------~gL~ylH~ 462 (626)
++|..|.. -||.... ..... |.+..++..++. ..+..|.+
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 99754421 1122111 11222 444444544332 23445544
Q ss_pred hcc----CCCceeccCCCCCeeeCCC----CCeEEeeccCcc
Q 006903 463 ELR----EDGIAHGNLKSNNILFNNN----MEPCISEYGLIV 496 (626)
Q Consensus 463 ~~~----~~~ivHrDlkp~NILl~~~----~~~kl~DFGl~~ 496 (626)
.+. ...++|+|+.+.||+++.+ +.+.+.||..+.
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 331 2358999999999999876 688999998753
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0086 Score=61.00 Aligned_cols=142 Identities=10% Similarity=0.044 Sum_probs=70.6
Q ss_pred cccccCCCcc-eEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCC--CccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGS-LYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHP--NVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~--nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.|+.|.... +|+....+|..+++|...... .+++..|+.+++.+... .+.+++.+.... -+++||++.+..+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l 99 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALF 99 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBH
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcch
Confidence 4465555544 677776546777787654322 13344556655555321 234455543222 3789999977666
Q ss_pred hHhhcC---------------------CCC--CCCCCHHHHH-------H-------------HHHHHHHHHHHHHHhc-
Q 006903 429 FNLLHG---------------------SEN--GQSFDWGSRL-------R-------------VAACVAKALALIHEEL- 464 (626)
Q Consensus 429 ~~~l~~---------------------~~~--~~~l~~~~~~-------~-------------i~~~ia~gL~ylH~~~- 464 (626)
.+++.. ... ...++..... . ....+...+..+.+..
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 543321 000 0112211100 0 0011122233332111
Q ss_pred -cCCCceeccCCCCCeeeCCC----CCeEEeeccCccc
Q 006903 465 -REDGIAHGNLKSNNILFNNN----MEPCISEYGLIVT 497 (626)
Q Consensus 465 -~~~~ivHrDlkp~NILl~~~----~~~kl~DFGl~~~ 497 (626)
....++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 24579999999999999874 6789999998654
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0014 Score=60.25 Aligned_cols=83 Identities=10% Similarity=0.193 Sum_probs=64.6
Q ss_pred CCccEEEcccCCCcccCCccccCCCCCcEEEeeccc-cccccChhhhcC----CCCCeEEccCCc-CCcc-CCCccCcCC
Q 006903 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK-LSGNLPDSLSKL----NNLKRLDISNNN-FSSE-LPDLSRISG 170 (626)
Q Consensus 98 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~ip~~~~~l----~~L~~L~ls~N~-l~g~-~p~~~~~~~ 170 (626)
-.|+.|||+++.++..--..+..|++|+.|+|+++. ++..-=..++.+ ++|+.|||+++. +|.. +..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 359999999999886655668899999999999985 664333345554 479999999985 7642 344778999
Q ss_pred CcEEEcCCCc
Q 006903 171 LLTFFAENNQ 180 (626)
Q Consensus 171 L~~l~l~~N~ 180 (626)
|+.|+++++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999874
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0029 Score=65.61 Aligned_cols=72 Identities=8% Similarity=0.042 Sum_probs=42.0
Q ss_pred cccccCCCcceEEEEeCC---------CcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCc-cccceEEEeCCeEEEEEe
Q 006903 352 ELLGRGKHGSLYRVVLDD---------GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV-LPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nI-v~l~g~~~~~~~~~lv~E 421 (626)
..++.|....+|+....+ +..+++|+.........+...|.++++.+...++ .++++.. . -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 457788888999998654 2678888875432111124567777776643333 3555433 2 368999
Q ss_pred ecCCCC
Q 006903 422 YQPNGS 427 (626)
Q Consensus 422 y~~~g~ 427 (626)
|++|..
T Consensus 115 ~i~G~~ 120 (369)
T 3c5i_A 115 WLYGDP 120 (369)
T ss_dssp CCCSEE
T ss_pred EecCCc
Confidence 998754
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0044 Score=53.94 Aligned_cols=56 Identities=27% Similarity=0.398 Sum_probs=40.0
Q ss_pred cEEEeeccccc-cccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCccc
Q 006903 125 THLYVGRNKLS-GNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLR 182 (626)
Q Consensus 125 ~~L~l~~N~l~-g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~ 182 (626)
..++.+++.|+ ..+|..+. ++|+.|||++|+|+...+. |..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 46777777775 35665432 4688999999999876665 677777777777777654
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0014 Score=61.32 Aligned_cols=85 Identities=15% Similarity=0.276 Sum_probs=51.7
Q ss_pred CCCCCccEEEcccC-CCccc----CCccccCCCCCcEEEeecccccc----ccChhhhcCCCCCeEEccCCcCCccC---
Q 006903 95 CKTQSLVVLSLEEN-NIAGT----VSQEISNCKQLTHLYVGRNKLSG----NLPDSLSKLNNLKRLDISNNNFSSEL--- 162 (626)
Q Consensus 95 ~~l~~L~~L~ls~N-~l~g~----~p~~~~~l~~L~~L~l~~N~l~g----~ip~~~~~l~~L~~L~ls~N~l~g~~--- 162 (626)
..-+.|+.|+|++| ++... +-..+..-+.|+.|+|++|++.- .|-..+..-+.|+.|+|++|.|+..-
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34456777887775 55422 22344555678888888888752 23344556677888888888876421
Q ss_pred --CCccCcCCCcEEEcCCC
Q 006903 163 --PDLSRISGLLTFFAENN 179 (626)
Q Consensus 163 --p~~~~~~~L~~l~l~~N 179 (626)
..+..-+.|+.|++++|
T Consensus 118 la~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHhhCCceeEEECCCC
Confidence 11333455777777654
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.03 Score=59.24 Aligned_cols=71 Identities=8% Similarity=0.064 Sum_probs=48.0
Q ss_pred cccccCCCcceEEEEeCC--------CcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCc-cccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLDD--------GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV-LPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nI-v~l~g~~~~~~~~~lv~Ey 422 (626)
+.|+.|....||++...+ +..+.+|+.... ...+.+.+|..+++.+...++ .++++.+. + .+||||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEEE
Confidence 567888889999998753 478999987432 222566788888887753344 45555432 2 389999
Q ss_pred cCCCC
Q 006903 423 QPNGS 427 (626)
Q Consensus 423 ~~~g~ 427 (626)
+++.+
T Consensus 154 l~G~~ 158 (429)
T 1nw1_A 154 IPSRP 158 (429)
T ss_dssp CCEEE
T ss_pred eCCcc
Confidence 98633
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=95.53 E-value=0.077 Score=54.13 Aligned_cols=32 Identities=16% Similarity=0.284 Sum_probs=27.4
Q ss_pred CCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 466 ~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
...++|+|+.+.||++++++.+.+.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34699999999999999888899999987643
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=95.52 E-value=0.054 Score=57.75 Aligned_cols=73 Identities=8% Similarity=0.024 Sum_probs=45.9
Q ss_pred cccccCCCcceEEEEeCC-CcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCc-cccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVLDD-GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV-LPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nI-v~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.|+.|-...+|++...+ +..+++|+........-+-.+|..+++.+...++ .++++++ .+ .+||||+++..|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccC
Confidence 568888889999998765 5778888874422111123578888887765555 4555554 23 259999987443
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=94.96 E-value=0.0064 Score=56.82 Aligned_cols=84 Identities=18% Similarity=0.270 Sum_probs=59.4
Q ss_pred CeEEEEEecCC-Ccee--cc-CccccCCCCCccEEEcccCCCcccCC----ccccCCCCCcEEEeeccccccc----cCh
Q 006903 73 KSVRKIVLDGF-NLSG--IL-DTTSVCKTQSLVVLSLEENNIAGTVS----QEISNCKQLTHLYVGRNKLSGN----LPD 140 (626)
Q Consensus 73 ~~v~~l~L~~~-~l~g--~~-~~~~~~~l~~L~~L~ls~N~l~g~~p----~~~~~l~~L~~L~l~~N~l~g~----ip~ 140 (626)
..++.|+|+++ ++.. .. -...+..-++|+.|+|++|+|...-- ..+..-+.|+.|+|++|.|+.. |-.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 57899999986 6642 10 01234556789999999999984332 3344568899999999999743 223
Q ss_pred hhhcCCCCCeEEccCC
Q 006903 141 SLSKLNNLKRLDISNN 156 (626)
Q Consensus 141 ~~~~l~~L~~L~ls~N 156 (626)
.+..-+.|+.|+|++|
T Consensus 121 aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTTTCCCSEEECCCC
T ss_pred HHhhCCceeEEECCCC
Confidence 3455678999999976
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=94.73 E-value=0.25 Score=46.54 Aligned_cols=104 Identities=13% Similarity=0.037 Sum_probs=64.9
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLA 506 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~ 506 (626)
+|.++|.. .+.+++..+.+.++.|.+.+|.-.-. ...-..+=+-|..|++..+|.+...+ ..+. .
T Consensus 34 SL~eIL~~--~~~PlsEEqaWALc~Qc~~~L~~~~~---~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------~ 98 (229)
T 2yle_A 34 SLEEILRL--YNQPINEEQAWAVCYQCCGSLRAAAR---RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------A 98 (229)
T ss_dssp EHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cHHHHHHH--cCCCcCHHHHHHHHHHHHHHHHhhhh---cccCCceecCCcceEEecCCceeccc-cccc---------c
Confidence 78899874 34689999999999999998866521 11111223346889999999887764 1110 1
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCC
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQN 546 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~ 546 (626)
....+.+|+... ...+.+.=|||+|+++|.-+-=..|..
T Consensus 99 ~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~ 137 (229)
T 2yle_A 99 GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN 137 (229)
T ss_dssp --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc
Confidence 122334555432 234678899999999999987555443
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=94.24 E-value=0.12 Score=53.74 Aligned_cols=104 Identities=17% Similarity=0.300 Sum_probs=67.8
Q ss_pred ccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccC-hhhhcCCCCCeEEccCCcCCccCCC-ccCcCC
Q 006903 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLP-DSLSKLNNLKRLDISNNNFSSELPD-LSRISG 170 (626)
Q Consensus 93 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~ 170 (626)
.+..+..|+.+.+..+-.. .-...+.+|+.|+.+.+. +.++ .|+ ..|.++.+|+.++|..| ++-.-.. |..+.+
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 4556777888888655432 233457788888888886 4454 344 44777888888888754 4332232 777888
Q ss_pred CcEEEcCCCcccccCCCC---CCCCccEEEccCCc
Q 006903 171 LLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNN 202 (626)
Q Consensus 171 L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~ 202 (626)
|+.+.+.++ ++ .|... .+++|+.+++.+|.
T Consensus 336 L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 336 LERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp CCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCH
T ss_pred CCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCce
Confidence 888888655 33 45443 46778888887764
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=94.12 E-value=0.097 Score=55.10 Aligned_cols=140 Identities=14% Similarity=0.107 Sum_probs=81.7
Q ss_pred cccccCCCcceEEEEeCC--------CcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCc-cccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLDD--------GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV-LPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nI-v~l~g~~~~~~~~~lv~Ey 422 (626)
+.+..|-...+|+....+ +..+++|+........-+..+|.++++.+.-.++ .++++.+ . -++||||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 457778888999998753 5789999865432222234567777766642233 3444422 2 3789999
Q ss_pred cCCCChhH--------------h---hcCC-------C---CCCCCCHHHHHHHHHH-------------------HHHH
Q 006903 423 QPNGSLFN--------------L---LHGS-------E---NGQSFDWGSRLRVAAC-------------------VAKA 456 (626)
Q Consensus 423 ~~~g~L~~--------------~---l~~~-------~---~~~~l~~~~~~~i~~~-------------------ia~g 456 (626)
++|..|.. . +|.. . ...+.-|.+..++..+ +...
T Consensus 152 I~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e 231 (424)
T 3mes_A 152 IDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEE 231 (424)
T ss_dssp CCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHH
T ss_pred eCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHHH
Confidence 99865321 0 1110 0 1112224443333322 2233
Q ss_pred HHHHHHhcc--------------------CCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 457 LALIHEELR--------------------EDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 457 L~ylH~~~~--------------------~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
+.+|.+.+. ...++|+|+.+.||+ +.++.+.+.||..+.
T Consensus 232 ~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 232 IDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp HHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence 455543332 235899999999999 778889999998764
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=93.03 E-value=0.37 Score=49.59 Aligned_cols=84 Identities=14% Similarity=0.124 Sum_probs=35.1
Q ss_pred CCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCC-CccCcCCCcEE
Q 006903 96 KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP-DLSRISGLLTF 174 (626)
Q Consensus 96 ~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~~~L~~l 174 (626)
....|+.+.+..+ +.-.-...+.++..|+.+.+..+ ++..-...+..+.+|+.+++..+ ++.... .+..+++|+.+
T Consensus 215 ~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i 291 (379)
T 4h09_A 215 YGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKV 291 (379)
T ss_dssp TCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEE
T ss_pred cccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccc
Confidence 3444555555432 22222233445555555555443 22111223444555555554332 221111 14445555555
Q ss_pred EcCCCccc
Q 006903 175 FAENNQLR 182 (626)
Q Consensus 175 ~l~~N~l~ 182 (626)
.+.+|.++
T Consensus 292 ~l~~~~i~ 299 (379)
T 4h09_A 292 VMDNSAIE 299 (379)
T ss_dssp EECCTTCC
T ss_pred cccccccc
Confidence 55444443
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=92.16 E-value=0.26 Score=51.23 Aligned_cols=118 Identities=12% Similarity=0.108 Sum_probs=77.3
Q ss_pred EEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEcc
Q 006903 75 VRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDIS 154 (626)
Q Consensus 75 v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls 154 (626)
+..+.+..+... +....+..+..|+.+.+..+.+. ...+..+.+|+.+.+..| ++-.-...|.++.+|+.++|.
T Consensus 255 l~~~~~~~~~~~--i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 255 LESISIQNNKLR--IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp CCEEEECCTTCE--ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred ceeEEcCCCcce--eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 444444444322 22334566777888877765432 235778999999999765 552223458889999999997
Q ss_pred CCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCC
Q 006903 155 NNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNN 201 (626)
Q Consensus 155 ~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N 201 (626)
++ ++-.-.. |.++++|+.+.+..| ++ .|+.. .+.+|+.+++..|
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 54 5433333 888999999999776 43 45543 4678999888654
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=91.26 E-value=0.81 Score=47.34 Aligned_cols=82 Identities=10% Similarity=0.148 Sum_probs=53.2
Q ss_pred CccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CC
Q 006903 115 SQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DF 190 (626)
Q Consensus 115 p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~ 190 (626)
...|.+|..|+.+.+..+..+ .-...|.++++|+.+++. +.++..... |..+.+|+.+.+.+| ++ .|... .+
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C 333 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGC 333 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTC
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCC
Confidence 345778888888888766543 223456788888888885 344433222 778888888888765 22 34432 46
Q ss_pred CCccEEEccC
Q 006903 191 SNLLQFNVSN 200 (626)
Q Consensus 191 ~~L~~l~ls~ 200 (626)
.+|+.+.+..
T Consensus 334 ~~L~~i~ip~ 343 (394)
T 4gt6_A 334 EQLERIAIPS 343 (394)
T ss_dssp TTCCEEEECT
T ss_pred CCCCEEEECc
Confidence 7788887643
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=90.52 E-value=0.58 Score=48.04 Aligned_cols=132 Identities=17% Similarity=0.262 Sum_probs=87.4
Q ss_pred EEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccC-hhhhcCCCCCeEEc
Q 006903 75 VRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLP-DSLSKLNNLKRLDI 153 (626)
Q Consensus 75 v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~l~~L~~L~l 153 (626)
+..+.+..+ +. .+....+..+..|+.+.+..+ ++..-...+.++.+|+.+.+..+ +. .|+ ..|..+.+|+.+++
T Consensus 219 l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 219 LKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp CSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEE
T ss_pred cceeeeccc-ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccc
Confidence 444555433 22 122334567788999998765 55444556788999999999765 44 344 45788999999999
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCCCCCCCCCCCCcccCCCCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGN 222 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~gn 222 (626)
.+|.++..-+. |.++.+|+.+.+.++ ++ .|+.. .+++|+.+.+ |+.+..++...|.|.
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~i---------p~~v~~I~~~aF~~c 355 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISY---------PKSITLIESGAFEGS 355 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCC---------CTTCCEECTTTTTTS
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEE---------CCccCEEchhHhhCC
Confidence 98888765444 888999999999765 33 34443 3566766654 444445566667664
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=89.69 E-value=1.2 Score=45.91 Aligned_cols=119 Identities=13% Similarity=0.187 Sum_probs=80.8
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.+.+... +. .+....+..+..|+.+.+..|... .-...+.++..|+.+.+..+.+. ...+..+.+|+.+.+
T Consensus 231 ~l~~i~ip~~-~~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l 304 (394)
T 4fs7_A 231 GVKNIIIPDS-FT-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKL 304 (394)
T ss_dssp CCCEEEECTT-CC-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEE
T ss_pred CCceEEECCC-ce-ecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccccccccc
Confidence 4556666533 22 222334567788999999877554 34556888999999998876532 235788999999999
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNN 201 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N 201 (626)
..| ++..-+. +..+++|+.+++.++ ++ .|+.. .+++|+.+++..|
T Consensus 305 ~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 305 LDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred ccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 765 4433333 888999999999765 43 45543 4678888877544
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=80.67 E-value=0.28 Score=52.22 Aligned_cols=58 Identities=12% Similarity=0.046 Sum_probs=17.3
Q ss_pred cccccCCCcceEEEEeCC-CcEEEE------EEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEe
Q 006903 352 ELLGRGKHGSLYRVVLDD-GLMLAV------KRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCS 412 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~-g~~vAv------K~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~ 412 (626)
+.|| ||.||+|.+.. ..+||| |..+..... ...+.+|..+++..+|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 4566 99999999754 467888 776653322 2457888888999999999999987543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 626 | ||||
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-45 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-44 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-42 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-42 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-40 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 8e-40 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-39 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-39 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-38 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 6e-37 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 9e-37 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 9e-37 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-36 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 4e-36 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 8e-36 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-35 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-35 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 7e-35 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 6e-33 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 7e-33 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-32 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-32 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-32 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 7e-32 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-31 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-31 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-31 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-30 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-30 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-30 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 3e-30 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-28 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-28 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 6e-28 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 1e-27 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 3e-27 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 6e-26 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 6e-26 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-25 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 8e-25 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 9e-25 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-24 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 3e-24 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 5e-24 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 6e-24 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 7e-23 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-22 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-22 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 5e-22 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 6e-22 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-21 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 1e-21 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-21 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-20 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 5e-20 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-19 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 7e-19 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-17 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 8e-17 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 1e-16 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-14 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 4e-14 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 3e-11 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 5e-11 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 5e-09 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-09 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-09 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 7e-06 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 0.002 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 0.002 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 2e-09 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-05 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-04 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 0.003 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 7e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 4e-05 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.001 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.003 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 3e-04 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 4e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 8e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 9e-04 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.001 |
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (405), Expect = 2e-45
Identities = 58/266 (21%), Positives = 121/266 (45%), Gaps = 21/266 (7%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
E LG G+ G ++ + +AVK L+ S+S + F + ++H ++ A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAH 471
+++ ++ EY NGSL + L + +G L +AA +A+ +A I E H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEER----NYIH 132
Query: 472 GNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS----TIKAD 527
+L++ NIL ++ + I+++GL ++ + + I + + + TIK+D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 528 VYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQ 587
V+ FG++L E++T + G + ++ R ++ + EE L Q
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------RMVRPDNCPEE----LYQ 241
Query: 588 VALRCINQSPNERPSMNQVAVMINNI 613
+ C + P +RP+ + + ++ +
Sbjct: 242 LMRLCWKERPEDRPTFDYLRSVLEDF 267
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (400), Expect = 2e-44
Identities = 59/296 (19%), Positives = 116/296 (39%), Gaps = 35/296 (11%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
E +G+G+ G ++R G +AVK S + + + ++H N+L +A
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADN 67
Query: 412 SKQEKL----LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE---- 463
LV +Y +GSLF+ L+ + +++A A LA +H E
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS------------- 510
+ IAH +LKS NIL N CI++ GL V + + +
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 183
Query: 511 LKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570
L + S +AD+Y G++ E+ + + + +V + +VE +
Sbjct: 184 LDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRK 243
Query: 571 VLIAEA---------ASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617
V+ + S E + + ++ C + R + ++ ++ + ++E
Sbjct: 244 VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (383), Expect = 2e-42
Identities = 51/268 (19%), Positives = 110/268 (41%), Gaps = 21/268 (7%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
+ +G G+ G ++ + +A+K +R+ ++S EDF + + + HP ++
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAH 471
+ LV+E+ +G L + L F + L + V + + L E + H
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGM----AYLEEACVIH 124
Query: 472 GNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS----TIKAD 527
+L + N L N +S++G+ DQ + + + S ++ S + K+D
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 528 VYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQ 587
V+ FGV++ E+ + + + + V + + AS + Q
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF-------RLYKPRLASTH----VYQ 233
Query: 588 VALRCINQSPNERPSMNQVAVMINNIKE 615
+ C + P +RP+ +++ + I E
Sbjct: 234 IMNHCWKERPEDRPAFSRLLRQLAEIAE 261
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (384), Expect = 2e-42
Identities = 59/276 (21%), Positives = 119/276 (43%), Gaps = 27/276 (9%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLA 408
+ +G G G++Y+ + AVK L + + + FKN + + +H N+L
Sbjct: 14 QRIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL-FM 70
Query: 409 YYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG 468
Y + + +V ++ SL++ LH E F+ + +A A+ + +H +
Sbjct: 71 GYSTAPQLAIVTQWCEGSSLYHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAK----S 124
Query: 469 IAHGNLKSNNILFNNNMEPCISEYGL-IVTENHDQSFLAQTSSLKINDISNQMCS----- 522
I H +LKSNNI + ++ I ++GL V S + S I ++ ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 523 --TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580
+ ++DVY FG++L EL+TG+L + N + +V + + + +
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSK--VRSNCPKA 241
Query: 581 RMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616
+ ++ C+ + +ERP Q+ I +
Sbjct: 242 ----MKRLMAECLKKKRDERPLFPQILASIELLARS 273
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (371), Expect = 1e-40
Identities = 51/267 (19%), Positives = 105/267 (39%), Gaps = 19/267 (7%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
+ +G+G+ G + G +AVK +++ +++ F + ++H N++ L
Sbjct: 13 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIV 70
Query: 412 SKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470
++ L +V EY GSL + L S L+ + V +A+ +
Sbjct: 71 EEKGGLYIVTEYMAKGSLVDYLR-SRGRSVLGGDCLLKFSLDVCEAMEYLEGN----NFV 125
Query: 471 HGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYG 530
H +L + N+L + + +S++GL + Q + + + K+DV+
Sbjct: 126 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 185
Query: 531 FGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVAL 590
FG++L E+ + V L V V + ++ + + +V
Sbjct: 186 FGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-------KMDAPDGCPPA----VYEVMK 234
Query: 591 RCINQSPNERPSMNQVAVMINNIKEEE 617
C + RPS Q+ + +IK E
Sbjct: 235 NCWHLDAAMRPSFLQLREQLEHIKTHE 261
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (366), Expect = 8e-40
Identities = 60/266 (22%), Positives = 110/266 (41%), Gaps = 21/266 (7%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
LG+G G ++ + +A+K L+ ++S E F Q + ++H ++ L
Sbjct: 23 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV-QLYAVV 81
Query: 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAH 471
S++ +V EY GSL + L G E G+ + +AA +A +A + H
Sbjct: 82 SEEPIYIVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVE----RMNYVH 136
Query: 472 GNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS----TIKAD 527
+L++ NIL N+ ++++GL ++ Q + I + + TIK+D
Sbjct: 137 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 196
Query: 528 VYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQ 587
V+ FG++L EL T V G + V R + E L
Sbjct: 197 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------RMPCPPECPES----LHD 245
Query: 588 VALRCINQSPNERPSMNQVAVMINNI 613
+ +C + P ERP+ + + +
Sbjct: 246 LMCQCWRKEPEERPTFEYLQAFLEDY 271
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 144 bits (363), Expect = 2e-39
Identities = 61/278 (21%), Positives = 124/278 (44%), Gaps = 23/278 (8%)
Query: 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY 410
LG G++G +Y V L +AVK L++ ++ E+F + +KHPN++ L
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 411 CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470
+ ++ E+ G+L + L N Q L +A ++ A+ + ++
Sbjct: 83 TREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK----NFI 137
Query: 471 HGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS----TIKA 526
H +L + N L N ++++GL D + I + + + +IK+
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 527 DVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586
DV+ FGV+L E+ T + G +L+ V+ ++ +++ +E + E+ +
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGC------PEK----VY 246
Query: 587 QVALRCINQSPNERPSMNQVAVMINNIKEEEERSISSE 624
++ C +P++RPS ++ + +E SIS E
Sbjct: 247 ELMRACWQWNPSDRPSFAEIHQAFETMFQES--SISDE 282
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (360), Expect = 3e-39
Identities = 47/266 (17%), Positives = 106/266 (39%), Gaps = 21/266 (7%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411
+ LG G+ G + +A+K +++ S+S ++F + + ++ H ++
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAH 471
++ ++ EY NG L N L E F L + V +A+ + H
Sbjct: 70 KQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLH 123
Query: 472 GNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS----TIKAD 527
+L + N L N+ +S++GL D+ + S + ++ + K+D
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 528 VYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQ 587
++ FGV++ E+ + + F + + + + ASE+ +
Sbjct: 184 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------RLYRPHLASEK----VYT 232
Query: 588 VALRCINQSPNERPSMNQVAVMINNI 613
+ C ++ +ERP+ + I ++
Sbjct: 233 IMYSCWHEKADERPTFKILLSNILDV 258
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 142 bits (358), Expect = 1e-38
Identities = 56/298 (18%), Positives = 104/298 (34%), Gaps = 49/298 (16%)
Query: 352 ELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSISS--EDFKNRMQKIDHVKHPNV 403
+G G G +++ + M+AVK L++ + + DF+ + +PN+
Sbjct: 19 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 78
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHG---------------------SENGQSFD 442
+ L + L++EY G L L S
Sbjct: 79 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 138
Query: 443 WGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502
+L +A VA +A + E H +L + N L NM I+++GL
Sbjct: 139 CAEQLCIARQVAAGMAYLS----ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 194
Query: 503 SFLAQTSSL-----KINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHS 557
+ A + + T ++DV+ +GV+L E+ + L G ++
Sbjct: 195 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 254
Query: 558 VVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615
V A E L+L + C ++ P +RPS + ++ + E
Sbjct: 255 VRDGNI-----------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (347), Expect = 6e-37
Identities = 58/279 (20%), Positives = 100/279 (35%), Gaps = 31/279 (11%)
Query: 352 ELLGRGKHGSLYRVVLDD----GLMLAVKRLRDWSISSE--DFKNRMQKIDHVKHPNVLP 405
E++GRG G +Y L D + AVK L + E F + HPNVL
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 406 PLAYYC-SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
L S+ L+V Y +G L N + + + VAK + + +
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLASK- 149
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMC--- 521
H +L + N + + ++++GL + + +
Sbjct: 150 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 206
Query: 522 ----STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577
T K+DV+ FGV+L EL+T N +++ +L E
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-------RLLQPEYC 259
Query: 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616
+ L +V L+C + RPS +++ I+ I
Sbjct: 260 PDP----LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 294
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (344), Expect = 9e-37
Identities = 60/298 (20%), Positives = 109/298 (36%), Gaps = 36/298 (12%)
Query: 341 LKFEDLLRAPAELLGRGKHGSLYRVVL---DDGLMLAVKRLRDWSISS--EDFKNRMQKI 395
LK ++LL A EL G G GS+ + V + +A+K L+ + + E+ Q +
Sbjct: 5 LKRDNLLIADIEL-GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIM 63
Query: 396 DHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAK 455
+ +P ++ L C + +LV E G L L G + + + V+
Sbjct: 64 HQLDNPYIVR-LIGVCQAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSM 120
Query: 456 ALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKI-- 513
+ + E+ H +L + N+L N IS++GL D S+ S+ K
Sbjct: 121 GMKYLEEK----NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 176
Query: 514 ----NDISNQMCSTIKADVYGFGVILLELLT-GKL--VQNNGFNLATWVHSVVREEWTVE 566
+ N + ++DV+ +GV + E L+ G+ + G + ++ R E E
Sbjct: 177 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE 236
Query: 567 VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSISSE 624
E L + C +RP V + +
Sbjct: 237 CPPE--------------LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGH 280
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (345), Expect = 9e-37
Identities = 57/294 (19%), Positives = 116/294 (39%), Gaps = 36/294 (12%)
Query: 352 ELLGRGKHGSLYRVVLDDG---LMLAVKRLRDWSISS--EDFKNRMQKIDHV-KHPNVLP 405
+++G G G + + + + A+KR+++++ DF ++ + + HPN++
Sbjct: 16 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 75
Query: 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHG-------------SENGQSFDWGSRLRVAAC 452
L + L EY P+G+L + L + + L AA
Sbjct: 76 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 135
Query: 453 VAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLK 512
VA+ + + L + H +L + NIL N I+++GL + ++
Sbjct: 136 VARGM----DYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 191
Query: 513 INDIS--NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570
I N T +DV+ +GV+L E+++ G A + +
Sbjct: 192 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-------R 244
Query: 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSISSE 624
+ +E + + +C + P ERPS Q+ V +N + EE + +++
Sbjct: 245 LEKPLNCDDE----VYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTT 294
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (338), Expect = 4e-36
Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 23/266 (8%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPL 407
+G G +G ++ DG +L K L S++ + + + + +KHPN++
Sbjct: 10 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 69
Query: 408 AYYCSKQEKLL--VYEYQPNGSLFNLLH-GSENGQSFDWGSRLRVAACVAKALALIHEEL 464
+ L V EY G L +++ G++ Q D LRV + AL H
Sbjct: 70 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 129
Query: 465 RED-GIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL---AQTSSLKINDISNQM 520
+ H +LK N+ + + ++GL NHD SF T + N+M
Sbjct: 130 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRM 189
Query: 521 CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580
K+D++ G +L EL F+ + ++ I S+E
Sbjct: 190 SYNEKSDIWSLGCLLYELCALMPP-FTAFSQKELAGKIREGKFR-------RIPYRYSDE 241
Query: 581 RMLKLLQVALRCINQSPNERPSMNQV 606
L ++ R +N RPS+ ++
Sbjct: 242 ----LNEIITRMLNLKDYHRPSVEEI 263
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (341), Expect = 4e-36
Identities = 58/302 (19%), Positives = 121/302 (40%), Gaps = 50/302 (16%)
Query: 352 ELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSISS--EDFKNRMQKIDHVK-HPN 402
+ LG G G + D + +AVK L+ + + E + ++ + ++ H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 403 VLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHG---------------SENGQSFDWGSRL 447
++ L L++ EY G L N L ++ + D L
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 448 RVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQ 507
+ VAK +A + + H +L + NIL + I ++GL +D +++ +
Sbjct: 149 SFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 508 TSS------LKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE 561
++ + I N + + ++DV+ +G+ L EL + G + + + +++E
Sbjct: 205 GNARLPVKWMAPESIFNCVYTF-ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE 263
Query: 562 EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSI 621
+ +L E A E + + C + P +RP+ Q+ +I E++ S
Sbjct: 264 GF------RMLSPEHAPAE----MYDIMKTCWDADPLKRPTFKQIVQLI-----EKQISE 308
Query: 622 SS 623
S+
Sbjct: 309 ST 310
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (336), Expect = 8e-36
Identities = 50/277 (18%), Positives = 107/277 (38%), Gaps = 28/277 (10%)
Query: 352 ELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSISS--EDFKNRMQKIDHVKHPNVLP 405
+G G+ G +++ + + L +A+K ++ + S E F + HP+++
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
L ++ ++ E G L + L S D S + A ++ ALA + +
Sbjct: 73 -LIGVITENPVWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTALAYLESK-- 127
Query: 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCST-- 523
H ++ + N+L ++N + ++GL + A L I ++ + +
Sbjct: 128 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 524 --IKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581
+DV+ FGV + E+L + G + + E + +
Sbjct: 186 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------RLPMPPNCPPT- 237
Query: 582 MLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618
L + +C P+ RP ++ ++ I EEE+
Sbjct: 238 ---LYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 271
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 3e-35
Identities = 54/277 (19%), Positives = 104/277 (37%), Gaps = 31/277 (11%)
Query: 352 ELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSISS----EDFKNRMQKIDHVKHPNV 403
E LG G G + R D + +AVK L+ +S +DF + + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
+ L +V E P GSL + L ++ F G+ R A VA+ + + +
Sbjct: 74 IR-LYGVVLTPPMKMVTELAPLGSLLDRLR--KHQGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN------DIS 517
H +L + N+L I ++GL+ + K+ +
Sbjct: 131 ----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 518 NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577
+ +D + FGV L E+ T G N + +H + +E + ++
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC------ 240
Query: 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614
++ + V ++C P +RP+ + + +
Sbjct: 241 PQD----IYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 132 bits (334), Expect = 3e-35
Identities = 50/278 (17%), Positives = 103/278 (37%), Gaps = 31/278 (11%)
Query: 352 ELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSISS--EDFKNRMQKIDHVKHPNVLP 405
+++G G+ G + L + +A+K L+ DF + + HPNV+
Sbjct: 32 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 91
Query: 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
+++ E+ NGSL + L +N F + + +A + + +
Sbjct: 92 LEGVVTKSTPVMIITEFMENGSLDSFLR--QNDGQFTVIQLVGMLRGIAAGMKYLADM-- 147
Query: 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTI- 524
H +L + NIL N+N+ +S++GL D S TS+L
Sbjct: 148 --NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 205
Query: 525 -------KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577
+DV+ +G+++ E+++ ++++ ++ D
Sbjct: 206 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDC------- 258
Query: 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615
L Q+ L C + N RP Q+ ++ +
Sbjct: 259 PSA----LHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (329), Expect = 7e-35
Identities = 49/281 (17%), Positives = 106/281 (37%), Gaps = 32/281 (11%)
Query: 352 ELLGRGKHGSLYRVVLDDG-----LMLAVKRLRDWSISSE--DFKNRMQKIDHVKHPNVL 404
+++G G+ G +Y+ +L + +A+K L+ + DF + H N++
Sbjct: 13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 72
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
+ +++ EY NG+L L E F + + +A + +
Sbjct: 73 RLEGVISKYKPMMIITEYMENGALDKFLR--EKDGEFSVLQLVGMLRGIAAGMKYLANM- 129
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKI-------NDIS 517
H +L + NIL N+N+ +S++GL D TS KI IS
Sbjct: 130 ---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 186
Query: 518 NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577
+ ++ +DV+ FG+++ E++T + + ++
Sbjct: 187 YRKFTS-ASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-----------FRLPT 234
Query: 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618
+ + Q+ ++C Q RP + +++ + +
Sbjct: 235 PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 275
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (315), Expect = 6e-33
Identities = 41/264 (15%), Positives = 89/264 (33%), Gaps = 26/264 (9%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS--EDFKNRMQKIDHVKHPNVLPPLA 408
+ LG G +G + V +AVK + E+ K + + H NV+
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 409 YYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG 468
+ + L EY G LF+ + R + + +H G
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGI----G 123
Query: 469 IAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIND------ISNQMCS 522
I H ++K N+L + IS++GL ++ + +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 523 TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582
DV+ G++L +L G+L + + ++ + + ++
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI------DSA-- 235
Query: 583 LKLLQVALRCINQSPNERPSMNQV 606
L + + + ++P+ R ++ +
Sbjct: 236 --PLALLHKILVENPSARITIPDI 257
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (315), Expect = 7e-33
Identities = 47/287 (16%), Positives = 96/287 (33%), Gaps = 37/287 (12%)
Query: 339 NKLKFEDLLRAPAELLGRGKHGSLYRVVLDD---GLMLAVKRLRDWSISS---EDFKNRM 392
L ED + LG G G++ + +AVK L++ + ++
Sbjct: 6 KLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 59
Query: 393 QKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAAC 452
+ + +P ++ + C + +LV E G L L + + + +
Sbjct: 60 NVMQQLDNPYIVR-MIGICEAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQ 115
Query: 453 VAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLK 512
V+ + + E H +L + N+L IS++GL D+++ + K
Sbjct: 116 VSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 513 IN------DISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVE 566
+ N + K+DV+ FGV++ E + G + + + E
Sbjct: 172 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE---- 227
Query: 567 VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613
+ E + + C RP V + + N
Sbjct: 228 ---RMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLRNY 267
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (314), Expect = 2e-32
Identities = 49/292 (16%), Positives = 96/292 (32%), Gaps = 35/292 (11%)
Query: 352 ELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSISSE--DFKNRMQKIDHVKHPNV 403
LG+G G +Y V + +A+K + + + E +F N + +V
Sbjct: 26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 85
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLH-------GSENGQSFDWGSRLRVAACVAKA 456
+ L Q L++ E G L + L + +++A +A
Sbjct: 86 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 145
Query: 457 LALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSL----- 511
+ L + H +L + N + + I ++G+ + L
Sbjct: 146 M----AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 201
Query: 512 KINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571
+ T +DV+ FGV+L E+ T G + + V+ +
Sbjct: 202 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-------L 254
Query: 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSISS 623
+ + L ++ C +P RPS ++ I E R +S
Sbjct: 255 DKPDNCPDM----LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 302
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 2e-32
Identities = 52/293 (17%), Positives = 110/293 (37%), Gaps = 44/293 (15%)
Query: 352 ELLGRGKHGSLYRVV------LDDGLMLAVKRLRDWSISSE--DFKNRMQKIDHVKHPNV 403
+ LGRG G + +AVK L++ + SE + ++ + H+ H
Sbjct: 19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 78
Query: 404 LPPLAYYCSKQEK--LLVYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLR 448
+ L C+K +++ E+ G+L L N +
Sbjct: 79 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 138
Query: 449 VAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQT 508
+ VAK + + H +L + NIL + I ++GL D ++ +
Sbjct: 139 YSFQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 194
Query: 509 SS------LKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE 562
+ + I +++ + ++DV+ FGV+L E+ + G + ++E
Sbjct: 195 DARLPLKWMAPETIFDRVYTI-QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 253
Query: 563 WTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615
+ D + E + Q L C + P++RP+ +++ + N+ +
Sbjct: 254 TRMRAPDYT------TPE----MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (314), Expect = 2e-32
Identities = 52/294 (17%), Positives = 109/294 (37%), Gaps = 48/294 (16%)
Query: 352 ELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSISSE--DFKNRMQKIDHV-KHPN 402
++LG G G + + +AVK L++ + SSE + ++ + + H N
Sbjct: 43 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 102
Query: 403 VLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHG--------------------SENGQSFD 442
++ L L++EY G L N L E+
Sbjct: 103 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 162
Query: 443 WGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502
+ L A VAK + + + H +L + N+L + I ++GL D
Sbjct: 163 FEDLLCFAYQVAKGMEFLEFK----SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 218
Query: 503 SFLAQTS---SLKINDISNQMCS--TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHS 557
+++ + + +K + TIK+DV+ +G++L E+ + + G + +
Sbjct: 219 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYK 278
Query: 558 VVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611
+++ + ++ A+EE + + C +RPS + +
Sbjct: 279 LIQNGFKMD------QPFYATEE----IYIIMQSCWAFDSRKRPSFPNLTSFLG 322
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 123 bits (310), Expect = 7e-32
Identities = 47/272 (17%), Positives = 96/272 (35%), Gaps = 30/272 (11%)
Query: 342 KFEDLLRAPAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQK----ID 396
F DL +G G G++Y + + ++A+K++ S + + K +
Sbjct: 16 LFSDL-----REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 397 HVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKA 456
++HPN + Y + LV EY + L + + V +
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQG 127
Query: 457 LALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL--AQTSSLKIN 514
LA +H + H ++K+ NIL + + ++G SF+ + ++
Sbjct: 128 LAYLHSH----NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVI 183
Query: 515 DISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574
++ K DV+ G+ +EL K N + ++ + + E
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPP-LFNMNAMSALYHIAQNESPALQSGHW--- 239
Query: 575 EAASEERMLKLLQVALRCINQSPNERPSMNQV 606
SE C+ + P +RP+ +
Sbjct: 240 ---SEY----FRNFVDSCLQKIPQDRPTSEVL 264
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (303), Expect = 2e-31
Identities = 55/261 (21%), Positives = 103/261 (39%), Gaps = 26/261 (9%)
Query: 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQK----IDHVKHPNVLPP 406
LG+GK G++Y +LA+K L + ++++++ H++HPN+L
Sbjct: 12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 71
Query: 407 LAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRE 466
Y+ L+ EY P G+++ L FD +A AL+ H +
Sbjct: 72 YGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCHSK--- 125
Query: 467 DGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF-LAQTSSLKINDISNQMCSTIK 525
+ H ++K N+L + E I+++G V + L T ++ K
Sbjct: 126 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 184
Query: 526 ADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585
D++ GV+ E L GK + R E+T + +E
Sbjct: 185 VDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFT--------FPDFVTEG----A 231
Query: 586 LQVALRCINQSPNERPSMNQV 606
+ R + +P++RP + +V
Sbjct: 232 RDLISRLLKHNPSQRPMLREV 252
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (305), Expect = 2e-31
Identities = 43/265 (16%), Positives = 97/265 (36%), Gaps = 26/265 (9%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS-EDFKNRMQKIDHVKHPNVLPPLAY 409
LG G G +Y+ + ++ A K + S ED+ + + HPN++ L
Sbjct: 18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
+ + ++ E+ G++ ++ E + V AL +H+ I
Sbjct: 78 FYYENNLWILIEFCAGGAVDAVML--ELERPLTESQIQVVCKQTLDALNYLHDN----KI 131
Query: 470 AHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTS--------SLKINDISNQMC 521
H +LK+ NILF + + ++++G+ + + + S
Sbjct: 132 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 191
Query: 522 STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581
KADV+ G+ L+E+ + ++ N + + + E +
Sbjct: 192 YDYKADVWSLGITLIEMAEIEP-PHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK---- 246
Query: 582 MLKLLQVALRCINQSPNERPSMNQV 606
+C+ ++ + R + +Q+
Sbjct: 247 -----DFLKKCLEKNVDARWTTSQL 266
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 5e-31
Identities = 43/260 (16%), Positives = 97/260 (37%), Gaps = 20/260 (7%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY 410
E LGRG+ G ++R V K ++ K + ++ +H N+L +
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70
Query: 411 CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470
S +E ++++E+ +F ++ + + + V +AL +H I
Sbjct: 71 ESMEELVMIFEFISGLDIFERIN--TSAFELNEREIVSYVHQVCEALQFLHSH----NIG 124
Query: 471 HGNLKSNNILFNN--NMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISNQMCSTIKA 526
H +++ NI++ + I E+G + + L ++ +
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTAT 184
Query: 527 DVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586
D++ G ++ LL+G + +++ E+T FDE E + E +
Sbjct: 185 DMWSLGTLVYVLLSGINP-FLAETNQQIIENIMNAEYT---FDEEAFKEISIE-----AM 235
Query: 587 QVALRCINQSPNERPSMNQV 606
R + + R + ++
Sbjct: 236 DFVDRLLVKERKSRMTASEA 255
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 1e-30
Identities = 49/290 (16%), Positives = 98/290 (33%), Gaps = 41/290 (14%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS--EDFKNRMQKIDHVKHPNVLPPLA 408
LG G G +++V GL++A K + + +Q + P ++
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 409 YYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG 468
+ S E + E+ GSL +L +V+ V K L + E+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLREKH---K 125
Query: 469 IAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSF-LAQTSSLKINDISNQMCSTIKAD 527
I H ++K +NIL N+ E + ++G+ + T S + ++++D
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 528 VYGFGVILLELLTGKL--VQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585
++ G+ L+E+ G+ + L V + S M
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSR 245
Query: 586 LQVAL-----------------------------RCINQSPNERPSMNQV 606
+A+ +C+ ++P ER + Q+
Sbjct: 246 PPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (298), Expect = 2e-30
Identities = 49/292 (16%), Positives = 108/292 (36%), Gaps = 46/292 (15%)
Query: 352 ELLGRGKHGSLYRVVL--------DDGLMLAVKRLRDWSISSE--DFKNRMQKIDHV-KH 400
+ LG G G + + +AVK L+ + + D + M+ + + KH
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 401 PNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLH-------------GSENGQSFDWGSRL 447
N++ L ++ EY G+L L + +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 138
Query: 448 RVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQ 507
A VA+ + + + H +L + N+L + I+++GL +H +
Sbjct: 139 SCAYQVARGMEYLASK----KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 508 TSS------LKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE 561
T+ + + +++ + ++DV+ FGV+L E+ T G + + +++E
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTH-QSDVWSFGVLLWEIFTLGGSPYPGVPVE-ELFKLLKE 252
Query: 562 EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613
++ + E L + C + P++RP+ Q+ ++ I
Sbjct: 253 GHRMDKPSNC------TNE----LYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (295), Expect = 3e-30
Identities = 58/278 (20%), Positives = 105/278 (37%), Gaps = 52/278 (18%)
Query: 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPL 407
+GRG ++Y+ + + + +A L+D ++ + FK + + ++HPN++
Sbjct: 15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 74
Query: 408 AYYCS----KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
+ S K+ +LV E +G+L L + + K L +H
Sbjct: 75 DSWESTVKGKKCIVLVTELMTSGTLKTYLK---RFKVMKIKVLRSWCRQILKGLQFLHT- 130
Query: 464 LREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS 522
R I H +LK +NI I + GL ++LK + +
Sbjct: 131 -RTPPIIHRDLKCDNIFITGPTGSVKIGDLGL--------------ATLKRASFAKAVIG 175
Query: 523 TI--------------KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF 568
T DVY FG+ +LE+ T + + N A ++ V F
Sbjct: 176 TPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIYRRVTSGVKPASF 234
Query: 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
D+V I E ++ CI Q+ +ER S+ +
Sbjct: 235 DKVAIPEVK---------EIIEGCIRQNKDERYSIKDL 263
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (296), Expect = 3e-30
Identities = 50/260 (19%), Positives = 104/260 (40%), Gaps = 23/260 (8%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS-EDFKNRMQKIDHVKHPNVLPPLAY 409
E +G+G G++Y + + G +A++++ E N + + K+PN++ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
Y E +V EY GSL +++ D G V +AL +H +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN----QV 137
Query: 470 AHGNLKSNNILFNNNMEPCISEYGL---IVTENHDQSFLAQTSSLKINDISNQMCSTIKA 526
H ++KS+NIL + ++++G I E +S + T ++ + K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 527 DVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586
D++ G++ +E++ G+ N L ++ +++ S
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL------SAI----FR 247
Query: 587 QVALRCINQSPNERPSMNQV 606
RC++ +R S ++
Sbjct: 248 DFLNRCLDMDVEKRGSAKEL 267
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 114 bits (287), Expect = 2e-28
Identities = 52/261 (19%), Positives = 100/261 (38%), Gaps = 21/261 (8%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLR-DWSISSEDFKNRMQKIDHVKHPNVLPPLAY 409
E LG G G ++R V G + K + + + KN + ++ + HP ++
Sbjct: 35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 94
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
+ K E +L+ E+ G LF+ + + + L +HE I
Sbjct: 95 FEDKYEMVLILEFLSGGELFDRIA--AEDYKMSEAEVINYMRQACEGLKHMHEH----SI 148
Query: 470 AHGNLKSNNILFNNNMEP--CISEYGLIVTENHDQSFLAQTSSLKIN--DISNQMCSTIK 525
H ++K NI+ I ++GL N D+ T++ + +I ++
Sbjct: 149 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY 208
Query: 526 ADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585
D++ GV+ LL+G +L T +V R +W FDE + + E
Sbjct: 209 TDMWAIGVLGYVLLSGLSPFAGEDDLETL-QNVKRCDWE---FDEDAFSSVSPE-----A 259
Query: 586 LQVALRCINQSPNERPSMNQV 606
+ + P +R +++
Sbjct: 260 KDFIKNLLQKEPRKRLTVHDA 280
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (283), Expect = 2e-28
Identities = 47/265 (17%), Positives = 93/265 (35%), Gaps = 30/265 (11%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSED----FKNRMQKIDHVKHPNVLPP 406
++LG G ++ L A+K L I E+ + + HP +
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 407 LAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRE 466
+ ++ Y NG L + SFD A + AL +H +
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIR---KIGSFDETCTRFYTAEIVSALEYLHGK--- 127
Query: 467 DGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIN-----DISNQMC 521
GI H +LK NIL N +M I+++G + + S + ++ +
Sbjct: 128 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 186
Query: 522 STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581
+ +D++ G I+ +L+ G N +++ E+ F E +A
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYD---FPEKFFPKARD--- 239
Query: 582 MLKLLQVALRCINQSPNERPSMNQV 606
L++ + + +R ++
Sbjct: 240 ---LVE---KLLVLDATKRLGCEEM 258
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (280), Expect = 6e-28
Identities = 44/285 (15%), Positives = 109/285 (38%), Gaps = 30/285 (10%)
Query: 352 ELLGRGKHGSLYRVVLDD-----GLMLAVKRLRDWSISS--EDFKNRMQKIDHVKHPNVL 404
++LG G G++Y+ + + +A+K LR+ + ++ + + V +P+V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
L C L+ + P G L + + E+ + L +AK + L
Sbjct: 75 R-LLGICLTSTVQLITQLMPFGCLLD--YVREHKDNIGSQYLLNWCVQIAKGMN----YL 127
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSL-----KINDISNQ 519
+ + H +L + N+L I+++GL ++ +
Sbjct: 128 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187
Query: 520 MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579
T ++DV+ +GV + EL+T +G + + S++ + + +
Sbjct: 188 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPIC------TI 240
Query: 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSISSE 624
+ + + ++C + RP ++ + + + + +R + +
Sbjct: 241 D----VYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQ 281
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 112 bits (280), Expect = 1e-27
Identities = 53/261 (20%), Positives = 99/261 (37%), Gaps = 21/261 (8%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS-EDFKNRMQKIDHVKHPNVLPPLAY 409
E LG G G ++RV G A K + S E + +Q + ++HP ++
Sbjct: 32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 91
Query: 410 YCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGI 469
+ E +++YE+ G LF + + + V K L +HE
Sbjct: 92 FEDDNEMVMIYEFMSGGELFEKVA--DEHNKMSEDEAVEYMRQVCKGLCHMHEN----NY 145
Query: 470 AHGNLKSNNILFNN--NMEPCISEYGLIVTENHDQSFLAQTSSLKIND--ISNQMCSTIK 525
H +LK NI+F + E + ++GL + QS T + + ++
Sbjct: 146 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 205
Query: 526 ADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585
D++ GV+ LL+G G N + +V +W D+ + + +
Sbjct: 206 TDMWSVGVLSYILLSGLSP-FGGENDDETLRNVKSCDWN---MDDSAFSGISED-----G 256
Query: 586 LQVALRCINQSPNERPSMNQV 606
+ + PN R +++Q
Sbjct: 257 KDFIRKLLLADPNTRMTIHQA 277
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 109 bits (273), Expect = 3e-27
Identities = 42/275 (15%), Positives = 94/275 (34%), Gaps = 36/275 (13%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK----------- 399
E+LGRG + R + AVK + S + + +
Sbjct: 9 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 68
Query: 400 HPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALAL 459
HPN++ Y + LV++ G LF+ L + ++ + + +
Sbjct: 69 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT---EKVTLSEKETRKIMRALLEVICA 125
Query: 460 IHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSS--------L 511
+H+ I H +LK NIL +++M ++++G + + + +
Sbjct: 126 LHKL----NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 181
Query: 512 KINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571
+ + N + D++ GVI+ LL G + ++ + +
Sbjct: 182 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP-FWHRKQMLMLRMIMSGNYQFGSPEWD 240
Query: 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
++ + L+ R + P +R + +
Sbjct: 241 DYSDTVKD-----LVS---RFLVVQPQKRYTAEEA 267
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 105 bits (263), Expect = 6e-26
Identities = 49/266 (18%), Positives = 99/266 (37%), Gaps = 31/266 (11%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQK----IDHVKHPNVLPP 406
E+LG G ++ L +AVK LR F R ++ + HP ++
Sbjct: 13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 72
Query: 407 LAYYCSKQEKL----LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHE 462
++ +V EY +L +++H + V A +AL
Sbjct: 73 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQAL----N 125
Query: 463 ELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLK------INDI 516
++GI H ++K NI+ + + ++G+ + + QT+++ +
Sbjct: 126 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 185
Query: 517 SNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576
+ ++DVY G +L E+LTG+ G + + + VRE+ ++
Sbjct: 186 ARGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSVAYQHVREDPIPPSARHEGLSAD 244
Query: 577 ASEERMLKLLQVALRCINQSPNERPS 602
V L+ + ++P R
Sbjct: 245 LDA--------VVLKALAKNPENRYQ 262
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 107 bits (268), Expect = 6e-26
Identities = 45/264 (17%), Positives = 83/264 (31%), Gaps = 27/264 (10%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNR-------MQKIDHVKHPNV 403
++GRG G +Y D G M A+K L I + + + + P +
Sbjct: 10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 69
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
+ + + + + + G L L F AA + L +H
Sbjct: 70 VCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYAAEIILGLEHMHNR 126
Query: 464 LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIND--ISNQMC 521
+ + +LK NIL + + IS+ GL + + + + + + +
Sbjct: 127 ----FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVA 182
Query: 522 STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581
AD + G +L +LL G + VE+ D S E
Sbjct: 183 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF------SPE- 235
Query: 582 MLKLLQVALRCINQSPNERPSMNQ 605
L + + + N R
Sbjct: 236 ---LRSLLEGLLQRDVNRRLGCLG 256
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (262), Expect = 2e-25
Identities = 47/263 (17%), Positives = 91/263 (34%), Gaps = 29/263 (11%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-----KHPNVLP 405
++LG+G G ++ A+K L+ + +D V +HP +
Sbjct: 8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 67
Query: 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR 465
+ +K+ V EY G L + + FD AA + L + L
Sbjct: 68 MFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAAEIILGL----QFLH 120
Query: 466 EDGIAHGNLKSNNILFNNNMEPCISEYGL---IVTENHDQSFLAQTSSLKINDISNQMCS 522
GI + +LK +NIL + + I+++G+ + + + T +I
Sbjct: 121 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKY 180
Query: 523 TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582
D + FGV+L E+L G+ + E + D +E
Sbjct: 181 NHSVDWWSFGVLLYEMLIGQSP---------FHGQDEEELFHSIRMDNPFYPRWLEKE-- 229
Query: 583 LKLLQVALRCINQSPNERPSMNQ 605
+ ++ + P +R +
Sbjct: 230 --AKDLLVKLFVREPEKRLGVRG 250
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 102 bits (255), Expect = 8e-25
Identities = 37/282 (13%), Positives = 84/282 (29%), Gaps = 28/282 (9%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY 410
+G G G ++ L + +A+K S + ++ + + +P + Y+
Sbjct: 11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYF 69
Query: 411 CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470
+ ++ SL +LL G+ F + A + + IHE+ +
Sbjct: 70 GQEGLHNVLVIDLLGPSLEDLLD--LCGRKFSVKTVAMAAKQMLARVQSIHEK----SLV 123
Query: 471 HGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTI------ 524
+ ++K +N L + ++ T + T
Sbjct: 124 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSIN 183
Query: 525 ---------KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575
+ D+ G + + L G + G AT R + +
Sbjct: 184 THLGREQSRRDDLEALGHVFMYFLRGS-LPWQGLKAATNKQKYERIGEKKQSTPLRELCA 242
Query: 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617
EE + N + + P + + + + + E
Sbjct: 243 GFPEE----FYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 280
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 102 bits (255), Expect = 9e-25
Identities = 37/280 (13%), Positives = 84/280 (30%), Gaps = 26/280 (9%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY 410
+G G G +Y + G +A+K + ++ +P + +
Sbjct: 13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECV-KTKHPQLHIESKIYKMMQGGVGIPTIRWC 71
Query: 411 CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470
++ + ++ SL + + F + L +A + + IH +
Sbjct: 72 GAEGDYNVMVMELLGPSL--EDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK----NFI 125
Query: 471 HGNLKSNNILFNN---NMEPCISEYG----LIVTENHDQSFLAQTSSLKIN------DIS 517
H ++K +N L I ++G H + +L +
Sbjct: 126 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH 185
Query: 518 NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577
+ + + D+ G +L+ G L E + EVL
Sbjct: 186 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYP 245
Query: 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617
SE C + +++P + + + N+ +
Sbjct: 246 SE-----FATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 102 bits (254), Expect = 2e-24
Identities = 49/263 (18%), Positives = 98/263 (37%), Gaps = 24/263 (9%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS--EDFKNRMQKIDHVKHPNVLPPLA 408
++LG G + ++A+K + ++ +N + + +KHPN++
Sbjct: 15 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 74
Query: 409 YYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG 468
Y S L+ + G LF+ + + R+ V A+ + L + G
Sbjct: 75 IYESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQVLDAV----KYLHDLG 127
Query: 469 IAHGNLKSNNILF---NNNMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISNQMCST 523
I H +LK N+L+ + + + IS++GL + S T ++ Q +
Sbjct: 128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYS 187
Query: 524 IKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583
D + GVI LL G N A +++ E+ + I+++A
Sbjct: 188 KAVDCWSIGVIAYILLCGYPPF-YDENDAKLFEQILKAEYEFDSPYWDDISDSA------ 240
Query: 584 KLLQVALRCINQSPNERPSMNQV 606
+ + P +R + Q
Sbjct: 241 --KDFIRHLMEKDPEKRFTCEQA 261
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 3e-24
Identities = 51/298 (17%), Positives = 106/298 (35%), Gaps = 39/298 (13%)
Query: 336 SKVNKLKFEDLLRAPAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQK 394
+ ++ + D +++G G G +Y+ L D G ++A+K++ +Q
Sbjct: 15 DRPQEVSYTDT-----KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ---DKRFKNRELQI 66
Query: 395 IDHVKHPNVLPPLAYYCSKQEK------LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLR 448
+ + H N++ ++ S EK LV +Y P H S Q+
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 449 VAACVAKALALIHEELREDGIAHGNLKSNNILFN-NNMEPCISEYGL---IVTENHDQSF 504
+ ++LA IH GI H ++K N+L + + + ++G +V + S+
Sbjct: 127 YMYQLFRSLAYIHSF----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTG--------------KLVQNNGFN 550
+ I T DV+ G +L ELL G ++++ G
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 551 LATWVHSVVRE--EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQV 606
+ + E+ + + + + R + +P R + +
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 100 bits (249), Expect = 5e-24
Identities = 44/279 (15%), Positives = 96/279 (34%), Gaps = 32/279 (11%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPLA 408
E +G G +G +Y+ + G A+K++R +++I +KH N++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 409 YYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG 468
+K+ +LV+E+ L + + + +A H+
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHDR----R 120
Query: 469 IAHGNLKSNNILFNNNMEPCISEYGL----IVTENHDQSFLAQTSSLKINDISNQMCSTI 524
+ H +LK N+L N E I+++GL + + + + +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 525 KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584
D++ G I E++ G + G + A + + R T + + E +
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLF-PGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 585 -----------------LLQVALRCINQSPNERPSMNQV 606
+ + + + PN+R + Q
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (251), Expect = 6e-24
Identities = 44/265 (16%), Positives = 95/265 (35%), Gaps = 23/265 (8%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY 410
++LG G +G + ++ A+K L+D + + + + + P+++ + Y
Sbjct: 18 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR---ASQCPHIVRIVDVY 74
Query: 411 CSKQEK----LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRE 466
+ L+V E G LF+ + Q+F + + +A+ +H
Sbjct: 75 ENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSI--- 130
Query: 467 DGIAHGNLKSNNILFNNNMEPCISEYGLI-----VTENHDQSFLAQTSSLKINDISNQMC 521
IAH ++K N+L+ + I + T ++ + T ++
Sbjct: 131 -NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 189
Query: 522 STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581
D++ GVI+ LL G + LA R F +E + E
Sbjct: 190 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE-- 247
Query: 582 MLKLLQVALRCINQSPNERPSMNQV 606
+ + + P +R ++ +
Sbjct: 248 ---VKMLIRNLLKTEPTQRMTITEF 269
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.3 bits (241), Expect = 7e-23
Identities = 40/282 (14%), Positives = 96/282 (34%), Gaps = 31/282 (10%)
Query: 352 ELLGRGKHGSLYRV--VLDDGLMLAVKRLRDWSISSEDFKNR------MQKIDHVKHPNV 403
+G G +G +++ + + G +A+KR+R + + ++ ++ +HPNV
Sbjct: 13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFN---LLHGSENGQSFDWGSRLRVAACVAKALALI 460
+ + + + + + + L +
Sbjct: 73 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 132
Query: 461 HEELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISN 518
H + H +LK NIL ++ + ++++GL I + + + T + ++
Sbjct: 133 HSH----RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 188
Query: 519 QMCSTIKADVYGFGVILLELLTGKL------VQNNGFNLATWVHSVVREEWTVEVFDEVL 572
Q D++ G I E+ K + + + E+W +V
Sbjct: 189 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQ 248
Query: 573 IAEAASEERMLKL--------LQVALRCINQSPNERPSMNQV 606
+ S + + K + L+C+ +P +R S
Sbjct: 249 AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 97.1 bits (241), Expect = 1e-22
Identities = 50/259 (19%), Positives = 87/259 (33%), Gaps = 25/259 (9%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQK----IDHVKHPNVLPP 406
LG G G ++ + +G A+K L+ + + V HP ++
Sbjct: 10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 69
Query: 407 LAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRE 466
+ Q+ ++ +Y G LF+LL VA A + L E L
Sbjct: 70 WGTFQDAQQIFMIMDYIEGGELFSLLR-------KSQRFPNPVAKFYAAEVCLALEYLHS 122
Query: 467 DGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKA 526
I + +LK NIL + N I+++G L T ++ +
Sbjct: 123 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSI 182
Query: 527 DVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586
D + FG+++ E+L G N ++ E F + LL
Sbjct: 183 DWWSFGILIYEMLAGYTP-FYDSNTMKTYEKILNAELR---FPPFFNEDVKD------LL 232
Query: 587 QVALRCINQSPNERPSMNQ 605
R I + ++R Q
Sbjct: 233 S---RLITRDLSQRLGNLQ 248
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.2 bits (236), Expect = 2e-22
Identities = 43/269 (15%), Positives = 88/269 (32%), Gaps = 40/269 (14%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNR----------MQKIDHVKH 400
LLG G GS+Y + + D L +A+K + IS ++K+
Sbjct: 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GF 68
Query: 401 PNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALI 460
V+ L ++ +L+ E + V +A+
Sbjct: 69 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQVLEAV--- 123
Query: 461 HEELREDGIAHGNLKSNNILFN-NNMEPCISEYGL--IVTENHDQSFLAQTSSLKINDIS 517
G+ H ++K NIL + N E + ++G ++ + F I
Sbjct: 124 -RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 518 NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577
A V+ G++L +++ G + + + +V +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG---------------QVFFRQRV 227
Query: 578 SEERMLKLLQVALRCINQSPNERPSMNQV 606
S E + C+ P++RP+ ++
Sbjct: 228 SSE----CQHLIRWCLALRPSDRPTFEEI 252
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.6 bits (234), Expect = 5e-22
Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 32/280 (11%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPL 407
E +G G +G++++ + ++A+KR+R + + +KH N++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 408 AYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED 467
S ++ LV+E+ + D + K L H
Sbjct: 68 DVLHSDKKLTLVFEFCDQ---DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---- 120
Query: 468 GIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKI----NDISNQMCST 523
+ H +LK N+L N N E ++ +GL + + + +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 524 IKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583
D++ G I EL G ++ + + R T + + +
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240
Query: 584 K-----------------LLQVALRCINQSPNERPSMNQV 606
+ + +P +R S +
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.4 bits (234), Expect = 6e-22
Identities = 57/270 (21%), Positives = 100/270 (37%), Gaps = 32/270 (11%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLR-------DWSISSEDFKNRMQKIDHVKHPNV 403
E LG G+ + + GL A K ++ +S ED + + + ++HPNV
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 404 LPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE 463
+ Y +K + +L+ E G LF+ L +S + + +H
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYYLHSL 132
Query: 464 LREDGIAHGNLKSNNILFNNNMEP----CISEYGL--IVTENHDQSFLAQTSSLKINDIS 517
IAH +LK NI+ + P I ++GL + ++ + T +I
Sbjct: 133 ----QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188
Query: 518 NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH-SVVREEWTVEVFDEVLIAEA 576
N ++AD++ GVI LL+G T + S V E+ E F
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT----- 243
Query: 577 ASEERMLKLLQVALRCINQSPNERPSMNQV 606
S R + + P +R ++
Sbjct: 244 -SAL----AKDFIRRLLVKDPKKRMTIQDS 268
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.8 bits (232), Expect = 1e-21
Identities = 43/281 (15%), Positives = 94/281 (33%), Gaps = 33/281 (11%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSED------FKNRMQKIDHVKHPNVL 404
+ LG G+ ++Y+ + ++A+K+++ S ++ + + HPN++
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 405 PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
L + K LV+++ + N + L +H+
Sbjct: 64 GLLDAFGHKSNISLVFDFMETDLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQH- 119
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYG---LIVTENHDQSFLAQTSSLKINDISNQMC 521
I H +LK NN+L + N ++++G + N + T + ++
Sbjct: 120 ---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGAR 176
Query: 522 S-TIKADVYGFGVILLELLTGKL------VQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574
+ D++ G IL ELL + + + + E+W +
Sbjct: 177 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 236
Query: 575 EAASEERMLK---------LLQVALRCINQSPNERPSMNQV 606
+ L LL + +P R + Q
Sbjct: 237 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 277
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.5 bits (234), Expect = 1e-21
Identities = 52/262 (19%), Positives = 94/262 (35%), Gaps = 28/262 (10%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQK----IDHVKHPNVLPP 406
+LLG+G G + V G A+K LR I ++D + + +HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 407 LAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRE 466
+ + V EY G LF L + F A + AL +H
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLHSR--- 124
Query: 467 DGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQ---TSSLKINDISNQMCST 523
+ + ++K N++ + + I+++GL D + + T ++
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 524 IKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583
D +G GV++ E++ G+L + ++ EE F L EA S
Sbjct: 184 RAVDWWGLGVVMYEMMCGRL-PFYNQDHERLFELILMEEIR---FPRTLSPEAKS----- 234
Query: 584 KLLQVALRCINQSPNERPSMNQ 605
LL + + P +R
Sbjct: 235 -LLA---GLLKKDPKQRLGGGP 252
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.4 bits (231), Expect = 3e-21
Identities = 40/288 (13%), Positives = 97/288 (33%), Gaps = 42/288 (14%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS--EDFKNRMQKIDHVKHPNVLPPLA 408
+G G +G + + + +A+K++ + + + ++ + +H N++
Sbjct: 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 73
Query: 409 YY----CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL 464
+ + + + + L+ LL Q + + L IH
Sbjct: 74 IIRAPTIEQMKDVYLVTHLMGADLYKLLK----TQHLSNDHICYFLYQILRGLKYIHSA- 128
Query: 465 REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKIND-------IS 517
+ H +LK +N+L N + I ++GL + D + +
Sbjct: 129 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 185
Query: 518 NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577
N T D++ G IL E+L+ + + G + ++ ++ + D I
Sbjct: 186 NSKGYTKSIDIWSVGCILAEMLSNRPI-FPGKHYLDQLNHILGILGSPSQEDLNCIINLK 244
Query: 578 SEERMLK-------------------LLQVALRCINQSPNERPSMNQV 606
+ +L L + + + +P++R + Q
Sbjct: 245 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.7 bits (224), Expect = 1e-20
Identities = 44/283 (15%), Positives = 96/283 (33%), Gaps = 38/283 (13%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
E +G G +G +Y+ G ++A+K++R + + +++I + HPN++ L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 408 AYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED 467
++ + LV+E+ + + G + + L
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGL----AFCHSH 121
Query: 468 GIAHGNLKSNNILFNNNMEPCISEYGL----IVTENHDQSFLAQTSSLKINDISNQMCST 523
+ H +LK N+L N ++++GL V + + +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 524 IKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583
D++ G I E++T + + F + + + R T+ DEV+ S
Sbjct: 182 TAVDIWSLGCIFAEMVTRRAL----FPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 584 K--------------------LLQVALRCINQSPNERPSMNQV 606
+ + ++ PN+R S
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.1 bits (220), Expect = 5e-20
Identities = 56/273 (20%), Positives = 103/273 (37%), Gaps = 38/273 (13%)
Query: 352 ELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSISS-----EDFKNRMQKIDHVKHPN 402
++LG G +G ++ V D G + A+K L+ +I E + Q ++H++
Sbjct: 30 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 89
Query: 403 VLPPLAYYCSKQEKL-LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIH 461
L L Y + KL L+ +Y G LF L + F + AL +H
Sbjct: 90 FLVTLHYAFQTETKLHLILDYINGGELFTHLS---QRERFTEHEVQIYVGEIVLALEHLH 146
Query: 462 EELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMC 521
+ GI + ++K NIL ++N ++++GL D++ A I ++ +
Sbjct: 147 KL----GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 202
Query: 522 S------TIKADVYGFGVILLELLTGKL---VQNNGFNLATWVHSVVREEWTVEVFDEVL 572
D + GV++ ELLTG V + A +++ E
Sbjct: 203 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP-------- 254
Query: 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQ 605
+ S + R + + P +R
Sbjct: 255 YPQEMSAL----AKDLIQRLLMKDPKKRLGCGP 283
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 87.9 bits (217), Expect = 2e-19
Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 14/198 (7%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS----EDFKNRMQKIDHVKHPNVLPP 406
+ LG G G + V + G A+K L + E N + + V P ++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 407 LAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRE 466
+ +V EY G +F+ L F AA + +H
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHSL--- 160
Query: 467 DGIAHGNLKSNNILFNNNMEPCISEYGL-IVTENHDQSFLAQTSSLKINDISNQMCSTIK 525
+ + +LK N+L + ++++G + + +L I ++ +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNK-A 218
Query: 526 ADVYGFGVILLELLTGKL 543
D + GV++ E+ G
Sbjct: 219 VDWWALGVLIYEMAAGYP 236
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.7 bits (211), Expect = 7e-19
Identities = 45/294 (15%), Positives = 99/294 (33%), Gaps = 46/294 (15%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVL--- 404
+G+G G +++ G +A+K++ + +++I +KH NV+
Sbjct: 16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 75
Query: 405 -----PPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALAL 459
Y K LV+++ + L + F RV + L
Sbjct: 76 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGL-- 130
Query: 460 IHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL--------IVTENHDQSFLAQTSSL 511
+ + I H ++K+ N+L + ++++GL N + +
Sbjct: 131 --YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYR 188
Query: 512 KINDISNQMCSTIKADVYGFGVILLELLTGK-LVQNNGFNLATWVHSVVREEWTVEVFDE 570
+ + D++G G I+ E+ T ++Q N + S + T EV+
Sbjct: 189 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 248
Query: 571 VLIAEAASEERMLKLLQVAL------------------RCINQSPNERPSMNQV 606
V E + ++K + + + + P +R +
Sbjct: 249 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.6 bits (203), Expect = 1e-17
Identities = 51/284 (17%), Positives = 99/284 (34%), Gaps = 38/284 (13%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
+ +G G +G++ V G +A+K+L S K +++ H++H NV+ L
Sbjct: 24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 83
Query: 408 AYYCSKQ------EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIH 461
+ + + LV + + H + + K L IH
Sbjct: 84 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK-----LGEDRIQFLVYQMLKGLRYIH 138
Query: 462 EELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-SFLAQTSSLKINDISNQM 520
GI H +LK N+ N + E I ++GL + + ++ I N M
Sbjct: 139 AA----GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWM 194
Query: 521 CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV-VREEWTVEVFDEVLIAEAASE 579
T D++ G I+ E++TGK + +L + V E + EA +
Sbjct: 195 RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY 254
Query: 580 ERMLK-----------------LLQVALRCINQSPNERPSMNQV 606
+ L + + + + +R + +
Sbjct: 255 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 79.5 bits (195), Expect = 8e-17
Identities = 39/288 (13%), Positives = 100/288 (34%), Gaps = 45/288 (15%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNVLPPLAY 409
LGRGK+ ++ + + + + VK L+ + + K ++ +++++ PN++
Sbjct: 41 RKLGRGKYSEVFEAINITNNEKVVVKILK--PVKKKKIKREIKILENLRGGPNIITLADI 98
Query: 410 YCSKQEKL--LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED 467
+ LV+E+ N L Q+ + KAL H
Sbjct: 99 VKDPVSRTPALVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHSM---- 148
Query: 468 GIAHGNLKSNNILFNN-NMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISNQMCS-T 523
GI H ++K +N++ ++ + + + ++GL + + + K ++
Sbjct: 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 208
Query: 524 IKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583
D++ G +L ++ K +G + + + + T +++D + + R
Sbjct: 209 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN 268
Query: 584 KLLQVAL-------------------------RCINQSPNERPSMNQV 606
+L + + R + +
Sbjct: 269 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.6 bits (195), Expect = 1e-16
Identities = 52/283 (18%), Positives = 103/283 (36%), Gaps = 36/283 (12%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
+G G +GS+ GL +AVK+L S K +++ H+KH NV+ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 408 AYYCSKQ-----EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHE 462
+ + + + + L N++ Q + + + L IH
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS 139
Query: 463 ELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDI-SNQMC 521
I H +LK +N+ N + E I ++GL + + + T + +I N M
Sbjct: 140 A----DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 522 STIKADVYGFGVILLELLTGK--------------LVQNNGFNLATWVHSVVREEWTVEV 567
D++ G I+ ELLTG+ +++ G A + + E +
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 568 FDEVLIAEAASEERMLKLLQVAL----RCINQSPNERPSMNQV 606
+ + + +A+ + + ++R + Q
Sbjct: 256 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 73.1 bits (178), Expect = 1e-14
Identities = 36/209 (17%), Positives = 76/209 (36%), Gaps = 17/209 (8%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY 410
LG G +++ + + +A+K +R + +E ++ ++ + V + +
Sbjct: 19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 78
Query: 411 CSKQEKLLVY--EYQPNGSLFNLLHGSENGQSFD-------WGSRLRVAACVAKALALIH 461
+ KLL + PNG ++ G L ++K L L
Sbjct: 79 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138
Query: 462 EELRED-GIAHGNLKSNNILFNNNMEPC------ISEYGLIVTENHDQSFLAQTSSLKIN 514
+ + GI H ++K N+L P I++ G + + QT +
Sbjct: 139 DYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSP 198
Query: 515 DISNQMCSTIKADVYGFGVILLELLTGKL 543
++ AD++ ++ EL+TG
Sbjct: 199 EVLLGAPWGCGADIWSTACLIFELITGDF 227
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.9 bits (175), Expect = 4e-14
Identities = 32/204 (15%), Positives = 70/204 (34%), Gaps = 22/204 (10%)
Query: 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKID---HVKHPNVLPPL 407
+ +G G G + +A+K+L + K +++ V H N++ L
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 408 AYYCSK------QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIH 461
+ + Q+ LV E + D + + + +H
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYLLYQMLCGIKHLH 136
Query: 462 EELREDGIAHGNLKSNNILFNNNMEPCISEYGL--IVTENHDQSFLAQTSSLKINDISNQ 519
H +LK +NI+ ++ I ++GL + + T + ++
Sbjct: 137 SAGII----HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 520 MCSTIKADVYGFGVILLELLTGKL 543
M D++ G I+ E++ K+
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKI 216
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 62.8 bits (151), Expect = 3e-11
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 178 NNQLRGGIPE--FDFSNLLQFNVSNNNLSGPVP--GVNGRLGADSFSGNPGLCGKPLPNA 233
NN++ G +P+ L NVS NNL G +P G R +++ N LCG PLP A
Sbjct: 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-A 311
Query: 234 C 234
C
Sbjct: 312 C 312
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 62.1 bits (149), Expect = 5e-11
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 29 KRALVQFMEKLSVGNAARDPNW--GWNRSSDPCSGKWVGVTCDSRQKSVRKIVLD--GFN 84
K+AL+Q + L +P W ++D C+ W+GV CD+ ++ R LD G N
Sbjct: 8 KQALLQIKKDLG------NPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN 61
Query: 85 LSGILDT-TSVCKTQSLVVLSLEEN-NIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSL 142
L +S+ L L + N+ G + I+ QL +LY+ +SG +PD L
Sbjct: 62 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL 121
Query: 143 SKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVS 199
S++ L LD S N S LP +S + L+ + N++ G IP+ FS L
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 200 NNN 202
+ N
Sbjct: 182 SRN 184
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 55.5 bits (132), Expect = 5e-09
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 105 LEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP 163
L N I GT+ Q ++ K L L V N L G +P L +NN P
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 58.5 bits (140), Expect = 1e-09
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 120 NCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENN 179
N K LT+L + N +S P +S L L+RL +NN S + L+ ++ + A +N
Sbjct: 305 NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD-VSSLANLTNINWLSAGHN 361
Query: 180 QLRGGIPEFDFSNLLQFNVSNN 201
Q+ P + + + Q +++
Sbjct: 362 QISDLTPLANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 57.3 bits (137), Expect = 2e-09
Identities = 37/181 (20%), Positives = 68/181 (37%), Gaps = 28/181 (15%)
Query: 49 NWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEEN 108
S + + +T ++ ++ L+G L I ++ +L L L N
Sbjct: 195 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI---GTLASLTNLTDLDLANN 251
Query: 109 NIAGTVSQEISNCKQLTHLYVGRNKLSGNLP--------------------DSLSKLNNL 148
I+ +S +LT L +G N++S P +S L NL
Sbjct: 252 QISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNL 309
Query: 149 KRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPV 207
L + NN S P +S ++ L F NN++ + + +N+ + +N +S
Sbjct: 310 TYLTLYFNNISDISP-VSSLTKLQRLFFANNKVSD-VSSLANLTNINWLSAGHNQISDLT 367
Query: 208 P 208
P
Sbjct: 368 P 368
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 46.1 bits (108), Expect = 7e-06
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+ L + N+ TVSQ ++ Q+T L R + ++ D + LNNL +++ SNN
Sbjct: 22 AEKMKTVLGKTNVTDTVSQ--TDLDQVTTLQADRLGIK-SI-DGVEYLNNLTQINFSNNQ 77
Query: 158 FSSELPDLSRISGL 171
+ + L ++ L
Sbjct: 78 LTD-ITPLKNLTKL 90
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 38.8 bits (89), Expect = 0.002
Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 111 AGTVSQEI--------SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSEL 162
+ T++Q+ + + +G+ ++ + S + L+ + L S +
Sbjct: 3 SATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIKS-I 59
Query: 163 PDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNN 202
+ ++ L NNQL P + + L+ ++NN
Sbjct: 60 DGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 99
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 38.1 bits (87), Expect = 0.002
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
++ + + + + DT S + L + I + LT + N
Sbjct: 19 TALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSNN 76
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNF 158
+L+ P L L L + ++NN
Sbjct: 77 QLTDITP--LKNLTKLVDILMNNNQI 100
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 55.2 bits (132), Expect = 2e-09
Identities = 24/176 (13%), Positives = 49/176 (27%), Gaps = 40/176 (22%)
Query: 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKID--------------- 396
+L+G GK +++ + VK + S + K + D
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 397 ----HVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAAC 452
++ V A+ ++ E + V
Sbjct: 66 RALQKLQGLAVPKVYAWE----GNAVLMELIDAK----------ELYRVRVENPDEVLDM 111
Query: 453 VAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--DQSFLA 506
+ + +A + GI HG+L N+L + I ++ V + L
Sbjct: 112 ILEEVAKFYHR----GIVHGDLSQYNVLV-SEEGIWIIDFPQSVEVGEEGWREILE 162
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 51.2 bits (121), Expect = 1e-07
Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+L L+ N I + N K L L + NK+S P + + L L+RL +S N
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 158 FSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSN---LLQFNVSNNNLSGPVPGVNGRL 214
LP+ + EN + F+ N +++ + SG G +
Sbjct: 91 LKE-LPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM 149
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.4 bits (106), Expect = 1e-05
Identities = 24/190 (12%), Positives = 54/190 (28%), Gaps = 35/190 (18%)
Query: 58 PCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEEN 108
C V C + L ++ I D ++L L L N
Sbjct: 7 RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDG-DFKNLKNLHTLILINN 65
Query: 109 NIAGTVSQEISNCKQLTHLYVGRNKLSG------------------------NLPDSLSK 144
I+ + +L LY+ +N+L ++ + L++
Sbjct: 66 KISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQ 125
Query: 145 LNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204
+ ++ + E + L + + IP+ +L + ++ N ++
Sbjct: 126 MIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLPPSLTELHLDGNKIT 184
Query: 205 GPVPGVNGRL 214
L
Sbjct: 185 KVDAASLKGL 194
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.3 bits (98), Expect = 1e-04
Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 14/152 (9%)
Query: 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152
+ + L + + + NI + LT L++ NK++ SL LNNL +L
Sbjct: 145 AFQGMKKLSYIRIADTNI---TTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLG 201
Query: 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNNLSGPVPGV 210
+S N+ S+ + L NN +P D + + NNN+S
Sbjct: 202 LSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSND 261
Query: 211 NGRLGAD---------SFSGNPGLCGKPLPNA 233
G + S NP + P+
Sbjct: 262 FCPPGYNTKKASYSGVSLFSNPVQYWEIQPST 293
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 37.7 bits (86), Expect = 0.003
Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 9/137 (6%)
Query: 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132
K + I + N++ I SL L L+ N I + + L L + N
Sbjct: 150 KKLSYIRIADTNITTIPQGLP----PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFN 205
Query: 133 KLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFS- 191
+S SL+ +L+ L ++NN L+ + + NN + I DF
Sbjct: 206 SISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCP 264
Query: 192 ---NLLQFNVSNNNLSG 205
N + + S +L
Sbjct: 265 PGYNTKKASYSGVSLFS 281
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.5 bits (121), Expect = 2e-07
Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 14/94 (14%)
Query: 98 QSLVVLSLEENNI----AGTVSQEISNCKQLTHLYVGRNKLSGN----LPDSLSKLN-NL 148
L VL L + ++ +++ + L L + N L L +S+ + L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 149 KRLDISNNNFSSELPDLSRISGLLTFFAENNQLR 182
++L + + +S E+ D L + LR
Sbjct: 429 EQLVLYDIYWSEEMEDR-----LQALEKDKPSLR 457
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 4e-05
Identities = 7/68 (10%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 99 SLVVLSLEENNIAGT-VSQEISNCKQLTHLYVGRNKLSG----NLPDSLSKLNNLKRLDI 153
+ L ++ ++ ++ + +Q + + L+ ++ +L L L++
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 154 SNNNFSSE 161
+N
Sbjct: 63 RSNELGDV 70
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (100), Expect = 6e-05
Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 20/94 (21%)
Query: 119 SNCKQLTHLYVGRNKLSGN----LPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTF 174
L L++ +S + L +L ++L+ LD+SNN I L+
Sbjct: 366 QPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA-----GILQLVES 420
Query: 175 FAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208
+ L Q + + S +
Sbjct: 421 VRQPG-----------CLLEQLVLYDIYWSEEME 443
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (89), Expect = 0.001
Identities = 12/94 (12%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNI----AGTVSQEISNCKQLTHLYV 129
++ + + LS + Q V+ L++ + +S + L L +
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 130 GRNKLSGNLPDSLSKL-----NNLKRLDISNNNF 158
N+L + + +++L + N
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (88), Expect = 0.002
Identities = 13/83 (15%), Positives = 25/83 (30%), Gaps = 18/83 (21%)
Query: 124 LTHLYVGRNKLSGN-LPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLR 182
+ L + +LS + L L + + + + + IS L N
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEA--RCKDISSAL----RVN--- 54
Query: 183 GGIPEFDFSNLLQFNVSNNNLSG 205
L + N+ +N L
Sbjct: 55 --------PALAELNLRSNELGD 69
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.0 bits (115), Expect = 7e-07
Identities = 25/173 (14%), Positives = 59/173 (34%), Gaps = 26/173 (15%)
Query: 57 DPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQ 116
D C + +G +++ + L L + D + +L L L N I+ +
Sbjct: 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD-TFRDLGNLTHLFLHGNRISSVPER 171
Query: 117 EISNCKQLTHLYVGRNKLSGNLPDSLSKLN------------------------NLKRLD 152
L L + +N+++ P + L L+ L
Sbjct: 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLR 231
Query: 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205
+++N + + + L F ++++ +P+ + ++ N+L G
Sbjct: 232 LNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQ-RLAGRDLKRLAANDLQG 283
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 45.6 bits (106), Expect = 1e-05
Identities = 22/120 (18%), Positives = 35/120 (29%), Gaps = 11/120 (9%)
Query: 47 DPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLE 106
D S L N S + SL L++
Sbjct: 233 DNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVS 292
Query: 107 ENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDL 165
N + E+ + +L L N L+ +P+ NLK+L + N PD+
Sbjct: 293 NNKL-----IELPALPPRLERLIASFNHLA-EVPELPQ---NLKQLHVEYNPLRE-FPDI 342
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.7 bits (96), Expect = 2e-04
Identities = 23/86 (26%), Positives = 31/86 (36%), Gaps = 5/86 (5%)
Query: 120 NCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENN 179
+L N S + +L+ L++SNN LP L L A N
Sbjct: 258 GLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL--PPRLERLIASFN 314
Query: 180 QLRGGIPEFDFSNLLQFNVSNNNLSG 205
L +PE NL Q +V N L
Sbjct: 315 HL-AEVPEL-PQNLKQLHVEYNPLRE 338
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 43.7 bits (101), Expect = 4e-05
Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 11/80 (13%)
Query: 105 LEENNIAGTVSQEISNC------KQLTHLYVGRNKLSGNLPDSL-----SKLNNLKRLDI 153
L + ++ + + + L L + N++ + +L K+ +L L++
Sbjct: 250 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLEL 309
Query: 154 SNNNFSSELPDLSRISGLLT 173
+ N FS E + I + +
Sbjct: 310 NGNRFSEEDDVVDEIREVFS 329
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.9 bits (95), Expect = 6e-05
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 127 LYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIP 186
L++ L+ L +L + LD+S+N + P L+ + L A +N L
Sbjct: 3 LHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 187 EFDFSNLLQFNVSNNNLSG 205
+ L + + NN L
Sbjct: 61 VANLPRLQELLLCNNRLQQ 79
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 40.8 bits (94), Expect = 2e-04
Identities = 12/61 (19%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 95 CKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDIS 154
L L ++N I + +++ L +++ N++S P L+ +NL + ++
Sbjct: 170 ANLSKLTTLKADDNKI--SDISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
Query: 155 N 155
N
Sbjct: 226 N 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 38.9 bits (89), Expect = 0.001
Identities = 12/61 (19%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+ + ++ ++N+ TV+Q ++ +T L ++ + + LNNL L++ +N
Sbjct: 19 ANAIKIAAGKSNVTDTVTQ--ADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKDNQ 74
Query: 158 F 158
Sbjct: 75 I 75
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 37.3 bits (85), Expect = 0.003
Identities = 6/62 (9%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 120 NCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENN 179
+ G++ ++ + + + L+ + L ++ + + ++ L+ ++N
Sbjct: 17 ALANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IEGVQYLNNLIGLELKDN 73
Query: 180 QL 181
Q+
Sbjct: 74 QI 75
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (92), Expect = 3e-04
Identities = 9/48 (18%), Positives = 14/48 (29%), Gaps = 3/48 (6%)
Query: 118 ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDL 165
L + R ++ L L L+ N +LP L
Sbjct: 197 FHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL---KKLPTL 241
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.5 bits (93), Expect = 4e-04
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 99 SLVVLSLEENNI-AGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157
+ + L + I T+ +S C +L +L + +LS + ++L+K +NL RL++S +
Sbjct: 47 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCS 106
Query: 158 F 158
Sbjct: 107 G 107
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (88), Expect = 8e-04
Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 115 SQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTF 174
+ + +N + L + K+ + + + L+ +D S+N +L + L T
Sbjct: 11 AAQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEI-RKLDGFPLLRRLKTL 68
Query: 175 FAENNQLRGGIPEFDF 190
NN++ D
Sbjct: 69 LVNNNRICRIGEGLDQ 84
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 9e-04
Identities = 12/66 (18%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152
V K S + ++ ++ N+ + ++ K T L++ N L +L L +L+
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 153 ISNNNF 158
+
Sbjct: 62 LDRAEL 67
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 38.5 bits (88), Expect = 0.001
Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 116 QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISN 155
++ +L +LY+ +N +S +L+ L NL L++ +
Sbjct: 172 VPLAGLTKLQNLYLSKNHISD--LRALAGLKNLDVLELFS 209
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 626 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.97 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.88 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.68 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.54 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.54 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.52 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.43 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.43 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.41 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.41 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.4 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.31 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.25 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.25 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.23 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.22 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.21 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.21 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.14 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.14 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.09 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.05 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.02 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 98.97 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 98.97 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 98.91 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 98.85 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 98.79 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 98.61 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.6 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.43 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.2 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 98.1 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 98.08 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 97.94 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.93 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 97.85 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 97.85 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.83 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 97.8 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.64 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.28 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.14 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.08 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 96.67 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 95.65 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 94.92 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 94.45 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 94.24 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-51 Score=413.84 Aligned_cols=249 Identities=19% Similarity=0.283 Sum_probs=204.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|++.+++.||||+++......++|.+|++++++++|||||+++|+|..++..++||||+++|+|.+
T Consensus 10 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~ 89 (263)
T d1sm2a_ 10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 89 (263)
T ss_dssp EEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred EEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHH
Confidence 46799999999999999889999999998877788899999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
++.. ....++|..++.++.|||.||.||| +++|+||||||+|||+++++.+||+|||+++...... ....
T Consensus 90 ~l~~--~~~~~~~~~~~~i~~qia~gl~~lH----~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~ 163 (263)
T d1sm2a_ 90 YLRT--QRGLFAAETLLGMCLDVCEGMAYLE----EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 163 (263)
T ss_dssp HHHT--TTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCTTCSGGGEEECGGGCEEECSCC-----------------
T ss_pred Hhhc--cccCCCHHHHHHHHHHHHHHHHhhh----ccceeecccchhheeecCCCCeEecccchheeccCCCceeeccee
Confidence 9874 3456899999999999999999999 5799999999999999999999999999987543221 2345
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
++..|+|||......++.++|||||||++|||+|+..|+....+..+....+....... . +..+...+.
T Consensus 164 gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~---~--------p~~~~~~l~ 232 (263)
T d1sm2a_ 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY---K--------PRLASTHVY 232 (263)
T ss_dssp -CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCC---C--------CTTSCHHHH
T ss_pred cCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCC---C--------ccccCHHHH
Confidence 67889999999888899999999999999999997666555555555554443322111 1 112234588
Q ss_pred HHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 587 QVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+++.+||+.||++||||+||++.|+++.+.
T Consensus 233 ~li~~cl~~~p~~Rps~~~il~~L~~i~es 262 (263)
T d1sm2a_ 233 QIMNHCWKERPEDRPAFSRLLRQLAEIAES 262 (263)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999998753
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.2e-50 Score=411.04 Aligned_cols=250 Identities=22% Similarity=0.346 Sum_probs=210.9
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||+||+|... +++.||||+++......++|.+|+++|++++|||||+++|+|.+++..++|||||++|+|.
T Consensus 22 ~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~ 101 (287)
T d1opja_ 22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 101 (287)
T ss_dssp EEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred eeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchH
Confidence 478999999999999964 6899999999877777889999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----ccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFL 505 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~ 505 (626)
+++... ....++|..++.++.||+.||.||| +++||||||||+|||+++++.+||+|||+++...... ...
T Consensus 102 ~~l~~~-~~~~~~~~~~~~i~~qi~~gL~yLH----~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~ 176 (287)
T d1opja_ 102 DYLREC-NRQEVSAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 176 (287)
T ss_dssp HHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTE
T ss_pred HHhhhc-cccchHHHHHHHHHHHHHHHHHHHH----HCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccc
Confidence 999642 3457999999999999999999999 5799999999999999999999999999997654332 223
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|+|||......++.++|||||||++|||+||+.|+..+.+..+....+... ..... +...+..+
T Consensus 177 ~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~-~~~~~----------~~~~~~~l 245 (287)
T d1opja_ 177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMER----------PEGCPEKV 245 (287)
T ss_dssp EECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CCCCC----------CTTCCHHH
T ss_pred cccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC-CCCCC----------CccchHHH
Confidence 46778999999888889999999999999999999888877666655544433222 21111 11223458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+++.+||+.||++||||+||++.|+.+..+
T Consensus 246 ~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 246 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 8999999999999999999999999988653
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.2e-51 Score=409.80 Aligned_cols=248 Identities=23% Similarity=0.371 Sum_probs=206.8
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|.+++++.||||+++......++|.+|++++++++|||||+++|++. ++..++||||+++|+|.+
T Consensus 18 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~ 96 (272)
T d1qpca_ 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVD 96 (272)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHH
T ss_pred eEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCCCCcHHH
Confidence 4789999999999999988899999999887778889999999999999999999999764 566799999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
++... ....++|..+++|+.||++||.||| +++|+||||||+|||+++++.+||+|||+++...... ....
T Consensus 97 ~~~~~-~~~~l~~~~~~~i~~qi~~gl~~lH----~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~ 171 (272)
T d1qpca_ 97 FLKTP-SGIKLTINKLLDMAAQIAEGMAFIE----ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 171 (272)
T ss_dssp HTTSH-HHHTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCC
T ss_pred HHhhc-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCccchhheeeecccceeeccccceEEccCCccccccccC
Confidence 88532 2236999999999999999999999 5799999999999999999999999999997643322 2345
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
++..|+|||......++.++|||||||++|||+||+.|+....+..+....+....... . +...+..+.
T Consensus 172 gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~-~----------p~~~~~~l~ 240 (272)
T d1qpca_ 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-R----------PDNCPEELY 240 (272)
T ss_dssp CCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC-C----------CTTCCHHHH
T ss_pred CcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC-C----------cccChHHHH
Confidence 67789999998888889999999999999999998777665555555544443322111 1 112233588
Q ss_pred HHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 587 QVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
+++.+||+.||++||||+||++.|+++-.
T Consensus 241 ~li~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 241 QLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 89999999999999999999999998754
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-50 Score=404.15 Aligned_cols=250 Identities=23% Similarity=0.356 Sum_probs=198.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||+||+|++.. .||||+++.... ..+.|.+|++++++++|||||++++++. ++..++|||||++|+
T Consensus 13 ~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~ 89 (276)
T d1uwha_ 13 GQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSS 89 (276)
T ss_dssp CSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCCEEE
T ss_pred EEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEecCCCCC
Confidence 4789999999999998653 599999975542 2367899999999999999999999864 567899999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-----c
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-----Q 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-----~ 502 (626)
|.++++.. ...++|..++.++.||++||+||| +++||||||||+|||++.++.+||+|||+++..... .
T Consensus 90 L~~~l~~~--~~~~~~~~~~~i~~qi~~gl~yLH----~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~ 163 (276)
T d1uwha_ 90 LYHHLHII--ETKFEMIKLIDIARQTAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163 (276)
T ss_dssp HHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC----------
T ss_pred HHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHh----cCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccc
Confidence 99999742 356999999999999999999999 579999999999999999999999999998654321 1
Q ss_pred cccccccccchhhcccc---CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 503 SFLAQTSSLKINDISNQ---MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~---~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
....+++.|+|||+... ..++.++|||||||++|||+||+.||.+.................... .....
T Consensus 164 ~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~-------~~~~~ 236 (276)
T d1uwha_ 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL-------SKVRS 236 (276)
T ss_dssp --CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCG-------GGSCT
T ss_pred cccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcc-------hhccc
Confidence 23467889999998753 347889999999999999999999997654443333222222111110 01112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.++..+.+++.+||+.||++||||+||++.|+.+++.
T Consensus 237 ~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 237 NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 2344688999999999999999999999999998753
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1e-49 Score=406.60 Aligned_cols=248 Identities=19% Similarity=0.300 Sum_probs=195.4
Q ss_pred ccccccCCCcceEEEEeC-CC---cEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DG---LMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g---~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.++||+|+||+||+|+.. ++ ..||||.+..... ..++|.+|+++|++++|||||+++|++..++..++|||||+
T Consensus 31 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~ 110 (299)
T d1jpaa_ 31 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFME 110 (299)
T ss_dssp EEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecC
Confidence 478999999999999864 33 3699999876432 23579999999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-- 502 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-- 502 (626)
+|+|.+++.. ....++|.+++.++.||++||.||| +++||||||||+|||++.++.+||+|||+++......
T Consensus 111 ~g~L~~~~~~--~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~ 184 (299)
T d1jpaa_ 111 NGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLA----DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184 (299)
T ss_dssp TEEHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred CCcceeeecc--ccCCCCHHHHHHHHHHHHHHHHHHh----hCCCccCccccceEEECCCCcEEECCcccceEccCCCCc
Confidence 9999999874 3456999999999999999999999 5799999999999999999999999999987543221
Q ss_pred ------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 503 ------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 503 ------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
....++..|++||......++.++|||||||++|||+| |+.||.+. ...+....+.......
T Consensus 185 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~-~~~~~~~~i~~~~~~~---------- 253 (299)
T d1jpaa_ 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-TNQDVINAIEQDYRLP---------- 253 (299)
T ss_dssp -----------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTTCCCC----------
T ss_pred ceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCCCCC----------
Confidence 11245778999999988889999999999999999998 88888643 3334444333322111
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+.+.+..+.+++.+||+.||++||||.||++.|+++...
T Consensus 254 -~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~ 293 (299)
T d1jpaa_ 254 -PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293 (299)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -CCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence 1122334588899999999999999999999999998654
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-49 Score=401.33 Aligned_cols=259 Identities=22% Similarity=0.332 Sum_probs=210.6
Q ss_pred ccchhhhhcccccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEE
Q 006903 340 KLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLV 419 (626)
Q Consensus 340 ~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv 419 (626)
.++++++. ..+.||+|+||.||+|+.++++.||||+++......++|.+|+.++++++|||||+++|++. ++..++|
T Consensus 13 ~i~~~~~~--i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv 89 (285)
T d1fmka3 13 EIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIV 89 (285)
T ss_dssp BCCGGGEE--EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred EcCHHHEE--EeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEE
Confidence 35555553 35789999999999999988889999999877778889999999999999999999999874 5668999
Q ss_pred EeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 420 YEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 420 ~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
|||+++|+|..++... ....++|.+++.++.||+.||+||| +++|+||||||+|||+++++.+||+|||+++...
T Consensus 90 ~Ey~~~g~l~~~~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH----~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~ 164 (285)
T d1fmka3 90 TEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 164 (285)
T ss_dssp ECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EEecCCCchhhhhhhc-ccccchHHHHHHHHHHHHHHHHHHh----hhheecccccceEEEECCCCcEEEcccchhhhcc
Confidence 9999999999998642 2346999999999999999999999 5799999999999999999999999999987543
Q ss_pred CC----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 500 HD----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 500 ~~----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.. .....++..|+|||......++.++|||||||++|||+||..|+..+....+....+..... ..
T Consensus 165 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~-~~--------- 234 (285)
T d1fmka3 165 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-MP--------- 234 (285)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-CC---------
T ss_pred CCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC-CC---------
Confidence 22 22345788899999998888999999999999999999988877766666655555443321 11
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+......+.+++.+||+.||++||||++|+++|++.....
T Consensus 235 -~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 235 -CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275 (285)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred -CCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence 11122345888999999999999999999999999876543
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-49 Score=391.88 Aligned_cols=245 Identities=18% Similarity=0.274 Sum_probs=206.6
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||+||+|++++++.||||+++......++|.+|++++++++|||||+++|+|.+++..++||||+++|+|.+
T Consensus 9 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~ 88 (258)
T d1k2pa_ 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 88 (258)
T ss_dssp CCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHH
T ss_pred eEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHH
Confidence 47899999999999999889999999999877788899999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
++.. ....+++..+.+++.|+++||.||| ++||+||||||+|||+++++.+||+|||+++...... ....
T Consensus 89 ~~~~--~~~~~~~~~~~~i~~qi~~gl~~LH----~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 162 (258)
T d1k2pa_ 89 YLRE--MRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 162 (258)
T ss_dssp HHHS--GGGCCCHHHHHHHHHHHHHHHHHHH----HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSC
T ss_pred hhhc--cccCCcHHHHHHHHHHHHHHHHHHh----hcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccC
Confidence 9864 2356899999999999999999999 5799999999999999999999999999987533221 2245
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|+|||......++.|+|||||||++|||+| |+.||... +..+....+.... ... . +......+
T Consensus 163 ~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~-~~~~~~~~i~~~~-~~~--~--------p~~~~~~l 230 (258)
T d1k2pa_ 163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF-TNSETAEHIAQGL-RLY--R--------PHLASEKV 230 (258)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS-CHHHHHHHHHTTC-CCC--C--------CTTCCHHH
T ss_pred CCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCC-CHHHHHHHHHhCC-CCC--C--------cccccHHH
Confidence 6788999999988889999999999999999998 78888643 3444444443321 111 1 11223458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.+++.+||+.||++|||++|+++.|.+|
T Consensus 231 ~~li~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 231 YTIMYSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred HHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence 8999999999999999999999998764
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-49 Score=398.87 Aligned_cols=249 Identities=18% Similarity=0.275 Sum_probs=200.3
Q ss_pred ccccccCCCcceEEEEeCCC-----cEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLDDG-----LMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g-----~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.++||+|+||.||+|.+++. ..||||+++.... ..++|.+|++++++++|||||+++|++.+.+..++||||+
T Consensus 12 ~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~ 91 (283)
T d1mqba_ 12 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 91 (283)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred eeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEec
Confidence 47899999999999986532 4799999975432 2356899999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
.+|++.+++.. ....++|..+++++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 92 ~~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~gl~~lH----~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~ 165 (283)
T d1mqba_ 92 ENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLA----NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 165 (283)
T ss_dssp TTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred ccCcchhhhhc--ccccccHHHHHHHHHHHHHhhhhcc----ccccccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence 99999998863 3357999999999999999999999 6799999999999999999999999999987533221
Q ss_pred -----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 -----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 -----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|+|||......++.++|||||||++|||+||..|+..+.+..+....+.... ... .
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~-~~~----------~ 234 (283)
T d1mqba_ 166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF-RLP----------T 234 (283)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-CCC----------C
T ss_pred cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccC-CCC----------C
Confidence 223467889999999888999999999999999999998777766655555544443321 111 1
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+.+.+..+.+++.+||+.||++||||.||++.|+++...
T Consensus 235 ~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 235 PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred chhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 122334588999999999999999999999999988654
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-49 Score=398.11 Aligned_cols=246 Identities=19% Similarity=0.238 Sum_probs=199.4
Q ss_pred ccccCCCcceEEEEeC---CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 353 LLGRGKHGSLYRVVLD---DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.||+|+||+||+|.+. ++..||||+++.... ..++|.+|+++|++++|||||+++|++.+ +..|+|||||++|+
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~ 94 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 94 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence 3999999999999753 456899999976442 23679999999999999999999998864 56899999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-----
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----- 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----- 502 (626)
|.+++.. ....+++..+.+++.|++.||+||| +++||||||||+|||++.++.+||+|||+++......
T Consensus 95 L~~~l~~--~~~~l~~~~~~~i~~qi~~gL~ylH----~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~ 168 (285)
T d1u59a_ 95 LHKFLVG--KREEIPVSNVAELLHQVSMGMKYLE----EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 168 (285)
T ss_dssp HHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECC
T ss_pred HHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCcCchhheeeccCCceeeccchhhhccccccccccc
Confidence 9999863 3357999999999999999999999 5799999999999999999999999999987543321
Q ss_pred -cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 503 -SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
....++..|+|||......++.++|||||||++|||+| |+.||.+.. ..+....+.... ..+ .++.
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~-~~~~~~~i~~~~-~~~----------~p~~ 236 (285)
T d1u59a_ 169 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-GPEVMAFIEQGK-RME----------CPPE 236 (285)
T ss_dssp CCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-THHHHHHHHTTC-CCC----------CCTT
T ss_pred ccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCC-CCC----------CCCc
Confidence 23356778999999888888999999999999999998 899987433 333333333222 111 1122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+..+.+++.+||+.||++||||.+|++.|+.+..+.
T Consensus 237 ~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~ 273 (285)
T d1u59a_ 237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 273 (285)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 3345889999999999999999999999998775543
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-49 Score=392.37 Aligned_cols=238 Identities=23% Similarity=0.361 Sum_probs=201.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCC----CCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDW----SISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||+||+|+. .+++.||+|++... ....+.+.+|++++++++|||||++++++.+++..|+||||+++
T Consensus 11 ~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~ 90 (263)
T d2j4za1 11 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 90 (263)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence 57899999999999995 56899999998643 23456789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-ccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-QSF 504 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-~~~ 504 (626)
|+|.+++.. ...+++..+..++.||+.||+||| +++||||||||+|||++.++.+||+|||+++..... ...
T Consensus 91 g~L~~~l~~---~~~l~e~~~~~i~~qi~~al~~lH----~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 163 (263)
T d2j4za1 91 GTVYRELQK---LSKFDEQRTATYITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 163 (263)
T ss_dssp CBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEE
T ss_pred CcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeeeeccccceecCCCCEeecccceeeecCCCcccc
Confidence 999999963 346999999999999999999999 679999999999999999999999999999765433 344
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..||+.|+|||+.....++.++|||||||++|||+||+.||.. .+..+....+....... ++.....
T Consensus 164 ~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~-~~~~~~~~~i~~~~~~~------------p~~~s~~ 230 (263)
T d2j4za1 164 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTF------------PDFVTEG 230 (263)
T ss_dssp TTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC-SSHHHHHHHHHTTCCCC------------CTTSCHH
T ss_pred cCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCC-CCHHHHHHHHHcCCCCC------------CccCCHH
Confidence 5789999999999988899999999999999999999999964 34444444444332211 1112235
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 231 ARDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCCHhHCcCHHHHHc
Confidence 788999999999999999999976
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-49 Score=394.18 Aligned_cols=241 Identities=17% Similarity=0.202 Sum_probs=195.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..|+||||+++|+
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~ 89 (271)
T d1nvra_ 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 89 (271)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCc
Confidence 47899999999999995 579999999987543 234578999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----Cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-----DQ 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-----~~ 502 (626)
|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+|||+++++.+||+|||+++.... ..
T Consensus 90 L~~~l~~---~~~l~e~~~~~i~~qi~~al~ylH----~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~ 162 (271)
T d1nvra_ 90 LFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 162 (271)
T ss_dssp GGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred HHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH----HcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccc
Confidence 9999953 357999999999999999999999 67999999999999999999999999999875321 12
Q ss_pred cccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 SFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....||+.|+|||+.....+ +.++|||||||++|||+||+.||....+.................. ...
T Consensus 163 ~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~------~~~---- 232 (271)
T d1nvra_ 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW------KKI---- 232 (271)
T ss_dssp CCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTG------GGS----
T ss_pred cceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCcc------ccC----
Confidence 34568999999999876654 6789999999999999999999975544333333322221111100 111
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||++|+++
T Consensus 233 s~~~~~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 233 DSAPLALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 234778899999999999999999965
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-48 Score=392.88 Aligned_cols=240 Identities=20% Similarity=0.311 Sum_probs=199.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..|+||||+++|+|
T Consensus 25 ~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L 104 (293)
T d1yhwa1 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (293)
T ss_dssp CEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred EEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcH
Confidence 36799999999999984 679999999987544 4567899999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Ccccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~~ 505 (626)
.+++.. ..+++..+..++.||+.||.||| ++|||||||||+|||++.++.+||+|||+++.... .....
T Consensus 105 ~~~~~~----~~l~~~~~~~i~~qi~~aL~yLH----~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 176 (293)
T d1yhwa1 105 TDVVTE----TCMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (293)
T ss_dssp HHHHHH----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred HHHhhc----cCCCHHHHHHHHHHHHHHHHHHH----HCCCcccCCcHHHeEECCCCcEeeccchhheeecccccccccc
Confidence 998853 35899999999999999999999 67999999999999999999999999999876432 22345
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.|++.|+|||+.....++.++|||||||++|||+||+.||.+.... +............ ... +......+
T Consensus 177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~-~~~~~~~~~~~~~-~~~--------~~~~s~~~ 246 (293)
T d1yhwa1 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-RALYLIATNGTPE-LQN--------PEKLSAIF 246 (293)
T ss_dssp CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHHCSCC-CSS--------GGGSCHHH
T ss_pred ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHH-HHHHHHHhCCCCC-CCC--------cccCCHHH
Confidence 6899999999998888999999999999999999999999754433 2233322222111 100 11122357
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+++.+||+.||++|||++|+++
T Consensus 247 ~~li~~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 247 RDFLNRCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhHCcCHHHHhc
Confidence 88999999999999999999976
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-48 Score=394.22 Aligned_cols=243 Identities=17% Similarity=0.238 Sum_probs=194.8
Q ss_pred cccccCCCcceEEEEeC---CCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVLD---DGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||+||+|.+. +++.||||+++..... .++|.+|+++|++++|||||+++|+|.+ +..++||||+++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 57999999999999854 3578999999754322 3579999999999999999999998864 567899999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.++++. ...++|..++.++.||+.||+||| +++||||||||+|||++.++.+||+|||+++......
T Consensus 92 g~L~~~l~~---~~~l~~~~~~~i~~qi~~gl~ylH----~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 164 (277)
T d1xbba_ 92 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLE----ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164 (277)
T ss_dssp EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred CcHHHHHhh---ccCCCHHHHHHHHHHHHHHHhhHH----hCCcccCCCcchhhcccccCcccccchhhhhhcccccccc
Confidence 999999964 356999999999999999999999 5799999999999999999999999999987543221
Q ss_pred ---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 ---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....++..|+|||......++.++|||||||++|||+| |+.||.+. +..+....+.... ... .+
T Consensus 165 ~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~-~~~~~~~~i~~~~-~~~----------~p 232 (277)
T d1xbba_ 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM-KGSEVTAMLEKGE-RMG----------CP 232 (277)
T ss_dssp EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC-CHHHHHHHHHTTC-CCC----------CC
T ss_pred ccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCC-CHHHHHHHHHcCC-CCC----------CC
Confidence 22356788999999888888999999999999999998 89998743 3333333333222 111 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
...+..+.+++.+||+.||++||||++|++.|+..-
T Consensus 233 ~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 268 (277)
T d1xbba_ 233 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268 (277)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHH
Confidence 122345889999999999999999999999988764
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-49 Score=391.46 Aligned_cols=256 Identities=20% Similarity=0.320 Sum_probs=199.4
Q ss_pred ccchhhhhcccccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEe-CCeEEE
Q 006903 340 KLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS-KQEKLL 418 (626)
Q Consensus 340 ~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-~~~~~l 418 (626)
.++.+|+. ..+.||+|+||.||+|.+. |+.||||+++.. ...++|.+|++++++++|||||+++|++.+ .+..++
T Consensus 3 ~i~~~~~~--~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~l 78 (262)
T d1byga_ 3 ALNMKELK--LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78 (262)
T ss_dssp BCCGGGEE--EEEEEEECSSCEEEEEEET-TEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred ccCHHHeE--EeEEEecCCCeEEEEEEEC-CeEEEEEEECcH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEE
Confidence 34455553 3578999999999999984 789999999753 455789999999999999999999999865 456899
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+++|+|.++++.. ....++|..+++++.||+.||.||| +++|+||||||+|||++.++.+|++|||+++..
T Consensus 79 v~ey~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~al~ylH----~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~ 153 (262)
T d1byga_ 79 VTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 153 (262)
T ss_dssp EECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred EEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHhhccccc----cCceeccccchHhheecCCCCEeecccccceec
Confidence 99999999999999632 2235899999999999999999999 579999999999999999999999999999876
Q ss_pred CCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 499 NHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 499 ~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
........++..|+|||......++.++|||||||++|||+| |+.|+. +.+..+....+.... ..+.
T Consensus 154 ~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~-~~~~~~~~~~i~~~~-~~~~---------- 221 (262)
T d1byga_ 154 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP-RIPLKDVVPRVEKGY-KMDA---------- 221 (262)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCT-TSCGGGHHHHHTTTC-CCCC----------
T ss_pred CCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCC-CCCHHHHHHHHHcCC-CCCC----------
Confidence 555555667889999999988889999999999999999999 566655 334444444443321 1111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+......+.+++.+||+.||++||||.|++++|++++..
T Consensus 222 ~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~ 260 (262)
T d1byga_ 222 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 260 (262)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence 112234578999999999999999999999999998753
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-48 Score=386.45 Aligned_cols=239 Identities=22% Similarity=0.310 Sum_probs=195.0
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEe----CCeEEEEEeec
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCS----KQEKLLVYEYQ 423 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~----~~~~~lv~Ey~ 423 (626)
+.||+|+||+||+|.. .+++.||+|++...... .+.+.+|+++|++++|||||++++++.+ +...++||||+
T Consensus 15 ~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~ 94 (270)
T d1t4ha_ 15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 94 (270)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCC
Confidence 5799999999999995 56889999998765433 3568999999999999999999999875 34579999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeC-CCCCeEEeeccCccccCC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFN-NNMEPCISEYGLIVTENH 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~-~~~~~kl~DFGl~~~~~~ 500 (626)
++|+|.+++.. ...+++..+..++.||++||+||| +++ |+||||||+|||++ +++.+||+|||+++....
T Consensus 95 ~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~gl~yLH----~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~ 167 (270)
T d1t4ha_ 95 TSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLH----TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 167 (270)
T ss_dssp CSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCcHHHHHhc---cccccHHHHHHHHHHHHHHHHHHH----HCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence 99999999963 346899999999999999999999 455 99999999999996 578999999999976433
Q ss_pred C-ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 501 D-QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 501 ~-~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
. .....||+.|+|||+... .++.++|||||||++|||+||+.||....+..+....+........ ++ ..
T Consensus 168 ~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~-~~-----~~--- 237 (270)
T d1t4ha_ 168 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS-FD-----KV--- 237 (270)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGG-GG-----GC---
T ss_pred CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcc-cC-----cc---
Confidence 2 334578999999998865 5899999999999999999999999866555555444433322111 11 11
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+.+++.+||+.||++|||++|+++
T Consensus 238 -~~~~~~~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 238 -AIPEVKEIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp -CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence 1234788999999999999999999975
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-48 Score=394.06 Aligned_cols=251 Identities=22% Similarity=0.291 Sum_probs=201.7
Q ss_pred cccccccCCCcceEEEEeCC----CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEe-CCeEEEEEee
Q 006903 350 PAELLGRGKHGSLYRVVLDD----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCS-KQEKLLVYEY 422 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-~~~~~lv~Ey 422 (626)
..++||+|+||+||+|++.+ ...||||+++.... ..++|.+|+++|++++|||||+++|++.. ++..++||||
T Consensus 31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~ 110 (311)
T d1r0pa_ 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 110 (311)
T ss_dssp EEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence 35789999999999999643 23699999975332 23679999999999999999999999876 4678999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
|++|+|.++++. ....+++..+++++.|++.||.|+| +++|+||||||+|||+++++.+||+|||+++.....
T Consensus 111 ~~~g~l~~~~~~--~~~~~~~~~~~~i~~qia~gL~~lH----~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~ 184 (311)
T d1r0pa_ 111 MKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLA----SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 184 (311)
T ss_dssp CTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTT
T ss_pred eecCchhhhhcc--ccccchHHHHHHHHHHHHHhhhhhc----ccCcccCCccHHhEeECCCCCEEEecccchhhccccc
Confidence 999999999974 3456789999999999999999999 679999999999999999999999999998753322
Q ss_pred ------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 502 ------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.....++..|++||......++.++|||||||++|||+||+.||....+..++...+....... .
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~---~------ 255 (311)
T d1r0pa_ 185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL---Q------ 255 (311)
T ss_dssp CCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCC---C------
T ss_pred cccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---C------
Confidence 1224567889999998888899999999999999999999888876655555544444332211 1
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
++.....+.+++.+||+.||++||+|.||++.|+++....
T Consensus 256 --p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~ 295 (311)
T d1r0pa_ 256 --PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 295 (311)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred --cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhh
Confidence 1122345889999999999999999999999999998653
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-48 Score=393.30 Aligned_cols=242 Identities=17% Similarity=0.266 Sum_probs=197.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+++..++|||||++|+|
T Consensus 17 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L 96 (288)
T d2jfla1 17 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred eEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcH
Confidence 46799999999999995 579999999997654 3346799999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++.. ....+++..+..++.|++.||.||| +++||||||||+|||++.++.+||+|||+++..... ....
T Consensus 97 ~~~~~~--~~~~l~e~~~~~i~~qi~~gL~ylH----~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~ 170 (288)
T d2jfla1 97 DAVMLE--LERPLTESQIQVVCKQTLDALNYLH----DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 170 (288)
T ss_dssp HHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred HHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HCCEEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence 999853 2356999999999999999999999 579999999999999999999999999998653221 2345
Q ss_pred ccccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 506 AQTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 506 ~~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
.|++.|+|||+.. ...++.++|||||||++|||+||+.||..... .+.+..+....... ... +..
T Consensus 171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~-~~~~~~i~~~~~~~-~~~--------~~~ 240 (288)
T d2jfla1 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP-MRVLLKIAKSEPPT-LAQ--------PSR 240 (288)
T ss_dssp CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCG-GGHHHHHHHSCCCC-CSS--------GGG
T ss_pred ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCCCC-CCc--------ccc
Confidence 6889999999863 44578999999999999999999999975433 33333333332111 100 111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....+.+++.+||+.||++|||++|+++
T Consensus 241 ~s~~~~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 241 WSSNFKDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2335788999999999999999999976
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-48 Score=398.48 Aligned_cols=247 Identities=18% Similarity=0.261 Sum_probs=197.4
Q ss_pred cccccccCCCcceEEEEeC-C-----CcEEEEEEcCCCC--CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVLD-D-----GLMLAVKRLRDWS--ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~-----g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
..+.||+|+||+||+|+.. . ...||||.+.... ...+.+.+|+.++.++ +|||||++++++.+.+..++||
T Consensus 41 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 120 (325)
T d1rjba_ 41 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 120 (325)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred EeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEE
Confidence 3588999999999999853 2 2379999986543 3346799999999998 8999999999999999999999
Q ss_pred eecCCCChhHhhcCCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCee
Q 006903 421 EYQPNGSLFNLLHGSEN--------------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNIL 480 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~--------------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NIL 480 (626)
|||++|+|.++++..+. ...++|..++.++.||+.||+||| +++||||||||+|||
T Consensus 121 Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH----~~~IiHRDlKp~Nil 196 (325)
T d1rjba_ 121 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE----FKSCVHRDLAARNVL 196 (325)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH----HTTEEETTCSGGGEE
T ss_pred EcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCchhccc
Confidence 99999999999975321 135899999999999999999999 579999999999999
Q ss_pred eCCCCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHH
Q 006903 481 FNNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATW 554 (626)
Q Consensus 481 l~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~ 554 (626)
++.++.+||+|||+++...... ....+|+.|+|||......++.++|||||||++|||+| |+.||.+.... +.
T Consensus 197 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~-~~ 275 (325)
T d1rjba_ 197 VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD-AN 275 (325)
T ss_dssp EETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HH
T ss_pred cccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH-HH
Confidence 9999999999999997543322 12346888999999988889999999999999999998 89998743332 22
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMIN 611 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~ 611 (626)
+..........+. +......+.+|+.+||+.||++||||+||+++|.
T Consensus 276 ~~~~~~~~~~~~~----------p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 276 FYKLIQNGFKMDQ----------PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp HHHHHHTTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhcCCCCCC----------CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 3333333222111 1122345889999999999999999999999986
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-48 Score=389.42 Aligned_cols=246 Identities=21% Similarity=0.292 Sum_probs=188.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEe--CCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCS--KQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~--~~~~~lv~Ey~~ 424 (626)
.+.||+|+||+||+|+. .+|+.||||.++...... +.+.+|++++++++|||||++++++.+ .+..|+|||||+
T Consensus 9 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~ 88 (269)
T d2java1 9 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 88 (269)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCT
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCC
Confidence 47899999999999985 579999999998765443 468899999999999999999999865 456899999999
Q ss_pred CCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhc-cCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 425 NGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEEL-REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 425 ~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
+|+|.+++... +....+++..++.++.|++.||.|||+.. ..++||||||||+|||++.++.+||+|||+++......
T Consensus 89 ~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~ 168 (269)
T d2java1 89 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 168 (269)
T ss_dssp TEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC----
T ss_pred CCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCC
Confidence 99999998532 22457999999999999999999999631 12359999999999999999999999999987643322
Q ss_pred ---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 503 ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 503 ---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
....+++.|+|||+.....++.++|||||||++|||+||+.||.. .+..+....+...... .. +.
T Consensus 169 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~-~~~~~~~~~i~~~~~~-~~----------~~ 236 (269)
T d2java1 169 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA-FSQKELAGKIREGKFR-RI----------PY 236 (269)
T ss_dssp -------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHHTCCC-CC----------CT
T ss_pred CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCC-CCHHHHHHHHHcCCCC-CC----------Cc
Confidence 335678999999999888899999999999999999999999974 3444444444333221 11 11
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+.+++.+||+.||++|||++|+++
T Consensus 237 ~~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 237 RYSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 12235888999999999999999999975
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8.5e-48 Score=393.29 Aligned_cols=250 Identities=22% Similarity=0.313 Sum_probs=203.6
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||+||+|+.. +++.||||+++..... .++|.+|++++++++||||++++++|...+..++||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~ 97 (301)
T d1lufa_ 18 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 97 (301)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEEe
Confidence 478999999999999853 4678999999764432 35799999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee
Q 006903 423 QPNGSLFNLLHGSE---------------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF 481 (626)
Q Consensus 423 ~~~g~L~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl 481 (626)
+++|+|.++++... ....++|..++.|+.|++.||+||| +++||||||||+|||+
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH----~~~ivHrDlKp~NILl 173 (301)
T d1lufa_ 98 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS----ERKFVHRDLATRNCLV 173 (301)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEE
T ss_pred cCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc----cCCeEeeEEcccceEE
Confidence 99999999996321 1235899999999999999999999 6799999999999999
Q ss_pred CCCCCeEEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH
Q 006903 482 NNNMEPCISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH 556 (626)
Q Consensus 482 ~~~~~~kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~ 556 (626)
|.++.+||+|||+++..... .....++..|+|||......++.++|||||||++|||+||..|+..+.+..+...
T Consensus 174 d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~ 253 (301)
T d1lufa_ 174 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY 253 (301)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHH
Confidence 99999999999998643221 1234567789999999999999999999999999999999765444555555555
Q ss_pred HHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 557 SVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 557 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
.+..... .. .++..+..+.+|+.+||+.||++||||.||+++|+++.+
T Consensus 254 ~v~~~~~-~~----------~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~ 301 (301)
T d1lufa_ 254 YVRDGNI-LA----------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301 (301)
T ss_dssp HHHTTCC-CC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHcCCC-CC----------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 4443321 11 111223458899999999999999999999999999863
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-47 Score=393.36 Aligned_cols=266 Identities=23% Similarity=0.378 Sum_probs=210.8
Q ss_pred ccccchhhhhcccccccccCCCcceEEEEeC-CCc--EEEEEEcCCCC--CCHHHHHHHHHHhccC-CCCCccccceEEE
Q 006903 338 VNKLKFEDLLRAPAELLGRGKHGSLYRVVLD-DGL--MLAVKRLRDWS--ISSEDFKNRMQKIDHV-KHPNVLPPLAYYC 411 (626)
Q Consensus 338 ~~~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~-~g~--~vAvK~l~~~~--~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~ 411 (626)
++.++++|+.. .+.||+|+||+||+|.+. +|. .||||+++... ...++|.+|+++|+++ +|||||+++|+|.
T Consensus 4 ~~~i~~~~~~~--~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~ 81 (309)
T d1fvra_ 4 YPVLDWNDIKF--QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE 81 (309)
T ss_dssp SSBCCGGGCEE--EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE
T ss_pred CCccCHHHcEE--EEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEe
Confidence 34566777644 478999999999999854 444 57888876433 2446799999999998 7999999999999
Q ss_pred eCCeEEEEEeecCCCChhHhhcCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCC
Q 006903 412 SKQEKLLVYEYQPNGSLFNLLHGS-------------ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNN 478 (626)
Q Consensus 412 ~~~~~~lv~Ey~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~N 478 (626)
+++..++||||+++|+|.++++.. .....++|..++.++.||++||.|+| +++||||||||+|
T Consensus 82 ~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH----~~~iiHrDlkp~N 157 (309)
T d1fvra_ 82 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARN 157 (309)
T ss_dssp ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGG
T ss_pred cCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh----cCCccccccccce
Confidence 999999999999999999999743 12457999999999999999999999 6799999999999
Q ss_pred eeeCCCCCeEEeeccCccccCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH
Q 006903 479 ILFNNNMEPCISEYGLIVTENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH 556 (626)
Q Consensus 479 ILl~~~~~~kl~DFGl~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~ 556 (626)
||++.++.+||+|||+++..... .....++..|++||......++.++|||||||++|||+||..|+..+.+..+...
T Consensus 158 IL~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~ 237 (309)
T d1fvra_ 158 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 237 (309)
T ss_dssp EEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred EEEcCCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 99999999999999998754322 2234578889999999888899999999999999999998765544556666555
Q ss_pred HHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccccc
Q 006903 557 SVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERS 620 (626)
Q Consensus 557 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 620 (626)
.+..... .+. +......+.+++.+||+.||++||||+||++.|+++.++....
T Consensus 238 ~i~~~~~-~~~----------~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~~~ 290 (309)
T d1fvra_ 238 KLPQGYR-LEK----------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 290 (309)
T ss_dssp HGGGTCC-CCC----------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCS
T ss_pred HHHhcCC-CCC----------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCcCC
Confidence 5443321 111 1112345888999999999999999999999999987654433
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-48 Score=397.27 Aligned_cols=258 Identities=20% Similarity=0.266 Sum_probs=198.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||+||+|+. .+|+.||+|+++.... ..+.+.+|+++|++++|||||+++++|.+++..++|||||++|+
T Consensus 11 ~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~ 90 (322)
T d1s9ja_ 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 90 (322)
T ss_dssp EEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCc
Confidence 47899999999999995 5799999999975432 24678999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC-CCccccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN-HDQSFLA 506 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~-~~~~~~~ 506 (626)
|.+++.. ...+++..+..++.|++.||.|||+ .++|+||||||+|||+++++.+||+|||+|+... .......
T Consensus 91 L~~~l~~---~~~l~~~~~~~~~~qil~aL~yLH~---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~ 164 (322)
T d1s9ja_ 91 LDQVLKK---AGRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 164 (322)
T ss_dssp HHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---C
T ss_pred HHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHH---hCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCcccccc
Confidence 9999963 2468999999999999999999995 2489999999999999999999999999987532 2233457
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH--HHhhcccc--------------------
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH--SVVREEWT-------------------- 564 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~--~~~~~~~~-------------------- 564 (626)
||..|+|||+..+..++.++||||+||++|||+||+.||........... ........
T Consensus 165 GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (322)
T d1s9ja_ 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDS 244 (322)
T ss_dssp CSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------------------
T ss_pred CCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccccc
Confidence 89999999999998999999999999999999999999975432111000 00000000
Q ss_pred ---cccccH--HHHhh----hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 565 ---VEVFDE--VLIAE----AASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 565 ---~~~~d~--~~~~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
....+. ..... .........+.+++.+||+.||++|||++|+++ .+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~ 305 (322)
T d1s9ja_ 245 RPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 305 (322)
T ss_dssp -CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred ccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCC
Confidence 000000 00000 000011245888999999999999999999987 465543
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-47 Score=391.99 Aligned_cols=239 Identities=17% Similarity=0.223 Sum_probs=196.1
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCH----HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS----EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~----~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||+||+|+ ..+|+.||||+++...... +.+.+|+++|++++|||||++++++.+++..|+|||||++
T Consensus 20 l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~ 99 (309)
T d1u5ra_ 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG 99 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCC
Confidence 3679999999999998 4678999999997654332 4688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|..++.. ...+++..+..++.||+.||.||| ++|||||||||+|||++.++.+||+|||++...... ...
T Consensus 100 g~l~~~~~~---~~~l~e~~~~~i~~qi~~aL~yLH----~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~-~~~ 171 (309)
T d1u5ra_ 100 SASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NSF 171 (309)
T ss_dssp EHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-CCC
T ss_pred CchHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHH----hCCEeccCCCcceEEECCCCCEEEeecccccccCCC-Ccc
Confidence 999877643 357999999999999999999999 679999999999999999999999999999765443 345
Q ss_pred ccccccchhhcccc---CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 506 AQTSSLKINDISNQ---MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 506 ~~~~~~~~pe~~~~---~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
.||+.|+|||+... ..++.++|||||||++|||++|+.||.+.... +....+....... ... ....
T Consensus 172 ~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~-~~~~~i~~~~~~~-~~~---------~~~s 240 (309)
T d1u5ra_ 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNESPA-LQS---------GHWS 240 (309)
T ss_dssp CSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCCC-CSC---------TTSC
T ss_pred ccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCC-CCC---------CCCC
Confidence 68999999998743 35788999999999999999999999754433 3333333322111 100 1122
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 241 EYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 35888999999999999999999975
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-47 Score=391.69 Aligned_cols=259 Identities=22% Similarity=0.299 Sum_probs=196.6
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCC----eEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ----EKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~----~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|++ +|+.||||+++........+..|+..+..++|||||++++++.+++ ..++|||||++|
T Consensus 8 ~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g 86 (303)
T d1vjya_ 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG 86 (303)
T ss_dssp EEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCC
Confidence 36799999999999997 5889999999754332233445666677889999999999998754 579999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh----ccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE----LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~----~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
+|.++++. ..++|..+++++.++|.||+|+|+. +++++||||||||+|||+++++.+||+|||+++.....
T Consensus 87 ~L~~~l~~----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~ 162 (303)
T d1vjya_ 87 SLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162 (303)
T ss_dssp BHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT
T ss_pred CHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCC
Confidence 99999974 3589999999999999999999953 34579999999999999999999999999998653221
Q ss_pred ------ccccccccccchhhccccCC------CCCcchhHHHHHHHHHHHcCCCCCCCCc-------------chhHHHH
Q 006903 502 ------QSFLAQTSSLKINDISNQMC------STIKADVYGFGVILLELLTGKLVQNNGF-------------NLATWVH 556 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~~------~~~k~DVwSfGvvl~elltg~~p~~~~~-------------~~~~~~~ 556 (626)
.....++..|+|||...... ++.|+|||||||++|||+||..|+.... ...+...
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (303)
T d1vjya_ 163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR 242 (303)
T ss_dssp TEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHH
T ss_pred cceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHH
Confidence 12345789999999875432 4678999999999999999987763211 0111111
Q ss_pred HHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 557 SVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 557 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
....... .++.+.......+.+..+.+++.+||+.||++||||.||++.|+++..++.
T Consensus 243 ~~~~~~~----~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~~ 300 (303)
T d1vjya_ 243 KVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp HHHTTSC----CCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHhccc----cCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhcC
Confidence 1111111 111111122233456678999999999999999999999999999986543
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.8e-47 Score=387.27 Aligned_cols=243 Identities=19% Similarity=0.251 Sum_probs=186.6
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
..+.||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++.+++..|+|||||++|
T Consensus 13 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg 92 (307)
T d1a06a_ 13 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 92 (307)
T ss_dssp EEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence 357899999999999995 578999999997544 23356889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC---CCCCeEEeeccCccccCCC--
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN---NNMEPCISEYGLIVTENHD-- 501 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGl~~~~~~~-- 501 (626)
+|.+++.. ...+++..+..++.|++.||.||| +++||||||||+|||+. +++.+||+|||+++.....
T Consensus 93 ~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH----~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~ 165 (307)
T d1a06a_ 93 ELFDRIVE---KGFYTERDASRLIFQVLDAVKYLH----DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 165 (307)
T ss_dssp BHHHHHHT---CSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred cHHHhhhc---ccCCCHHHHHHHHHHHHHHHHhhh----hceeeeEEecccceeecccCCCceEEEeccceeEEccCCCe
Confidence 99999963 357999999999999999999999 67999999999999995 5789999999999754332
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....||+.|+|||+.....++.++|||||||++|||+||+.||.+.. ..+....+.......... ..+..
T Consensus 166 ~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-~~~~~~~i~~~~~~~~~~--------~~~~~ 236 (307)
T d1a06a_ 166 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN-DAKLFEQILKAEYEFDSP--------YWDDI 236 (307)
T ss_dssp -------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHTTCCCCCTT--------TTTTS
T ss_pred eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCC-HHHHHHHHhccCCCCCCc--------cccCC
Confidence 234568999999999988889999999999999999999999997543 333334444333221110 01112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||++|+++
T Consensus 237 s~~~~~li~~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 237 SDSAKDFIRHLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 335788999999999999999999987
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-47 Score=385.45 Aligned_cols=239 Identities=18% Similarity=0.263 Sum_probs=198.3
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..|+||||++
T Consensus 12 i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~ 91 (288)
T d1uu3a_ 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 91 (288)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccC
Confidence 357899999999999995 579999999986432 344679999999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
+|+|.+++.. ...+++..+..++.|++.||+||| +++||||||||+|||+++++.+||+|||+++.....
T Consensus 92 gg~L~~~~~~---~~~l~e~~~~~~~~qi~~al~ylH----~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~ 164 (288)
T d1uu3a_ 92 NGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164 (288)
T ss_dssp TEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CCCHHHhhhc---cCCCCHHHHHHHHHHHHHHHHhhc----cccEEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence 9999999863 346999999999999999999999 679999999999999999999999999999764321
Q ss_pred --ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 502 --QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
.....||+.|+|||+.....++.++|||||||++|||+||+.||... +..+....+....... +.
T Consensus 165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~-~~~~~~~~i~~~~~~~------------p~ 231 (288)
T d1uu3a_ 165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDF------------PE 231 (288)
T ss_dssp -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHTTCCCC------------CT
T ss_pred cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCc-CHHHHHHHHHcCCCCC------------Cc
Confidence 12346899999999998888999999999999999999999999754 3334444444332211 11
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+.+++.+||+.||++|||++|+.+
T Consensus 232 ~~s~~~~~li~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 232 KFFPKARDLVEKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp TCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred cCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence 12234788999999999999999998743
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-47 Score=381.44 Aligned_cols=248 Identities=19% Similarity=0.267 Sum_probs=193.3
Q ss_pred ccccccCCCcceEEEEeCC----CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLDD----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|++.. +..||||.++.... ..+.|.+|++++++++|||||+++|++. ++..++||||++
T Consensus 12 ~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~~ 90 (273)
T d1mp8a_ 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCT 90 (273)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred EEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEecc
Confidence 4789999999999998542 45799999875443 2357999999999999999999999885 567899999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
+|+|.+++.. ....+++..++.++.||++||.||| +++||||||||+||++++++.+||+|||+++.....
T Consensus 91 ~g~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH----~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~ 164 (273)
T d1mp8a_ 91 LGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 164 (273)
T ss_dssp TEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred CCcHHhhhhc--cCCCCCHHHHHHHHHHHHHHhhhhc----ccCeeccccchhheeecCCCcEEEccchhheeccCCcce
Confidence 9999998863 3357899999999999999999999 679999999999999999999999999998754322
Q ss_pred -ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 502 -QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 502 -~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
.....++..|+|||......++.++|||||||++|||+| |++||... +..+....+...... . .++
T Consensus 165 ~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~-~~~~~~~~i~~~~~~-~----------~~~ 232 (273)
T d1mp8a_ 165 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV-KNNDVIGRIENGERL-P----------MPP 232 (273)
T ss_dssp ------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC-CGGGHHHHHHTTCCC-C----------CCT
T ss_pred eccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCC-C----------CCC
Confidence 233456788999999988889999999999999999998 77787643 333333333332211 1 111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
..+..+.+++.+||+.||++|||+.||++.|+++.+++
T Consensus 233 ~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~ 270 (273)
T d1mp8a_ 233 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 270 (273)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 22345889999999999999999999999999987653
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=2.8e-46 Score=388.80 Aligned_cols=244 Identities=20% Similarity=0.288 Sum_probs=201.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..|+|||||++|+|
T Consensus 31 ~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L 110 (350)
T d1koaa2 31 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 110 (350)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCH
Confidence 57899999999999985 579999999997654 2346789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC--CCCCeEEeeccCccccCCCc--cc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN--NNMEPCISEYGLIVTENHDQ--SF 504 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGl~~~~~~~~--~~ 504 (626)
.+++.. ....+++..+..++.||+.||.||| ++|||||||||+|||++ .++.+||+|||+++...... ..
T Consensus 111 ~~~l~~--~~~~l~e~~~~~i~~qi~~aL~ylH----~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~ 184 (350)
T d1koaa2 111 FEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMH----ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 184 (350)
T ss_dssp HHHHTC--TTSCBCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEE
T ss_pred HHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHH----hcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccce
Confidence 999963 2346999999999999999999999 67999999999999996 46789999999987644332 34
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..+|+.|+|||+..+..++.++|||||||++|||+||+.||... +..+.+..+....+..... . .......
T Consensus 185 ~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~~---~-----~~~~s~~ 255 (350)
T d1koaa2 185 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDETLRNVKSCDWNMDDS---A-----FSGISED 255 (350)
T ss_dssp ECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCSCCG---G-----GGGCCHH
T ss_pred ecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCcc---c-----ccCCCHH
Confidence 57899999999998888999999999999999999999999743 4445555554433221110 0 0111234
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+.+++.+||+.||++|||++|+++.
T Consensus 256 ~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 256 GKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCChhHCcCHHHHhcC
Confidence 7889999999999999999999873
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=4.8e-46 Score=387.31 Aligned_cols=243 Identities=19% Similarity=0.299 Sum_probs=200.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+++..|+|||||++|+|
T Consensus 34 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L 113 (352)
T d1koba_ 34 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 113 (352)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChH
Confidence 47899999999999995 579999999997654 3345788999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC--CCCCeEEeeccCccccCCCc--cc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN--NNMEPCISEYGLIVTENHDQ--SF 504 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGl~~~~~~~~--~~ 504 (626)
.+++.. ....+++.++..++.||+.||.||| ++|||||||||+|||++ .++.+||+|||+++...... ..
T Consensus 114 ~~~~~~--~~~~l~e~~~~~i~~qi~~aL~ylH----~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~ 187 (352)
T d1koba_ 114 FDRIAA--EDYKMSEAEVINYMRQACEGLKHMH----EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 187 (352)
T ss_dssp HHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEE
T ss_pred HHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecccccccccccccCCCeEEEeecccceecCCCCceee
Confidence 998853 3456999999999999999999999 67999999999999998 67899999999997654332 34
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..+++.|++||+.....++.++||||+||++|||+||+.||.+. +..+....+......... .........
T Consensus 188 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-~~~~~~~~i~~~~~~~~~--------~~~~~~s~~ 258 (352)
T d1koba_ 188 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE-DDLETLQNVKRCDWEFDE--------DAFSSVSPE 258 (352)
T ss_dssp ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHHCCCCCCS--------STTTTSCHH
T ss_pred ccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCc--------ccccCCCHH
Confidence 56788999999998888999999999999999999999999754 333444444433221110 000112235
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~li~~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 259 AKDFIKNLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCChhHCcCHHHHhc
Confidence 788999999999999999999976
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-46 Score=384.88 Aligned_cols=247 Identities=17% Similarity=0.288 Sum_probs=195.5
Q ss_pred ccccccCCCcceEEEEeC-CCc----EEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLD-DGL----MLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~----~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.++||+|+||+||+|... +|+ .||+|+++... ...++|.+|++++++++|||||+++|+|.+ +..+++|||+
T Consensus 14 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~v~e~~ 92 (317)
T d1xkka_ 14 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLM 92 (317)
T ss_dssp EEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred eeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeeEEEEec
Confidence 478999999999999853 444 68999987543 345789999999999999999999999876 4577889999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
.+|+|.+++.. ....+++..+++++.||+.||+||| +++||||||||+|||++.++.+||+|||+++......
T Consensus 93 ~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~yLH----~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~ 166 (317)
T d1xkka_ 93 PFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLE----DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 166 (317)
T ss_dssp TTCBHHHHHHH--TSSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC
T ss_pred cCCcccccccc--cccCCCHHHHHHHHHHHHHHHHHHH----HcCcccCcchhhcceeCCCCCeEeeccccceecccccc
Confidence 99999998864 3457999999999999999999999 5799999999999999999999999999987543222
Q ss_pred ----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 ----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 ----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|+|||......++.++|||||||++|||+| |+.||.. .+..+....+...... . .
T Consensus 167 ~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~-~~~~~~~~~i~~~~~~-~----------~ 234 (317)
T d1xkka_ 167 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IPASEISSILEKGERL-P----------Q 234 (317)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT-SCGGGHHHHHHHTCCC-C----------C
T ss_pred cccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHcCCCC-C----------C
Confidence 22346889999999888889999999999999999999 6777653 3333333333222211 1 1
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
++.+...+.+++.+||+.||++|||+.||++.|+.+..+
T Consensus 235 p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~ 273 (317)
T d1xkka_ 235 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 273 (317)
T ss_dssp CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence 112234588899999999999999999999999887543
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-46 Score=377.69 Aligned_cols=243 Identities=21% Similarity=0.295 Sum_probs=199.3
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-------CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-------ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-------~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+++..|+|||
T Consensus 14 ~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E 93 (293)
T d1jksa_ 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 93 (293)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 357899999999999995 579999999986432 134689999999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC----CeEEeeccCccc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM----EPCISEYGLIVT 497 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGl~~~ 497 (626)
||++|+|.+++.. ...+++..+..++.|++.||+||| +++||||||||+|||++.++ .+|++|||++..
T Consensus 94 ~~~gg~L~~~i~~---~~~l~~~~~~~~~~qi~~al~yLH----~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~ 166 (293)
T d1jksa_ 94 LVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166 (293)
T ss_dssp CCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred cCCCccccchhcc---ccccchhHHHHHHHHHHHHHHhhh----hcceeecccccceEEEecCCCcccceEecchhhhhh
Confidence 9999999999964 246999999999999999999999 67999999999999999776 489999999876
Q ss_pred cCC--CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 498 ENH--DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 498 ~~~--~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
... ......+++.|+|||+.....++.++|||||||++|||+||+.||... +..+....+....... .....
T Consensus 167 ~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~-~~~~~~~~i~~~~~~~---~~~~~-- 240 (293)
T d1jksa_ 167 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANVSAVNYEF---EDEYF-- 240 (293)
T ss_dssp CTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHTTCCCC---CHHHH--
T ss_pred cCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCC-CHHHHHHHHHhcCCCC---Cchhc--
Confidence 433 233456788999999998888999999999999999999999999753 3333333333322111 11111
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++.+||+.||++|||++|+++
T Consensus 241 ---~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 241 ---SNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp ---TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112335788999999999999999999986
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-46 Score=382.62 Aligned_cols=250 Identities=19% Similarity=0.269 Sum_probs=189.6
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeC-CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSK-QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~-~~~~lv~ 420 (626)
.+.||+|+||.||+|... +++.||||+++.... ..+.+.+|+..+.++ +|+|||.+++++..+ +..++||
T Consensus 18 ~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~ 97 (299)
T d1ywna1 18 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 97 (299)
T ss_dssp EEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred eeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEE
Confidence 578999999999999842 357899999975442 235677888887766 689999999987765 4689999
Q ss_pred eecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCe
Q 006903 421 EYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEP 487 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~ 487 (626)
|||++|+|.++++.... ...+++..++.++.||++||.||| +++||||||||+|||+++++.+
T Consensus 98 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH----~~~ivHrDlKp~NILl~~~~~~ 173 (299)
T d1ywna1 98 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV 173 (299)
T ss_dssp ECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECGGGCE
T ss_pred EecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH----hCCCcCCcCCccceeECCCCcE
Confidence 99999999999964321 235899999999999999999999 6799999999999999999999
Q ss_pred EEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCC-CCCCCcchhHHHHHHhhc
Q 006903 488 CISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKL-VQNNGFNLATWVHSVVRE 561 (626)
Q Consensus 488 kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~-p~~~~~~~~~~~~~~~~~ 561 (626)
||+|||+++..... .....+|..|+|||......++.++|||||||++|||+||.. ||.. .+..+.+......
T Consensus 174 Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~-~~~~~~~~~~~~~ 252 (299)
T d1ywna1 174 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-VKIDEEFCRRLKE 252 (299)
T ss_dssp EECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-CCCSHHHHHHHHH
T ss_pred EEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCC-CCHHHHHHHHHhc
Confidence 99999998753322 123467889999999988889999999999999999999765 5543 3333333333333
Q ss_pred ccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 562 EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 562 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
....... +.....+.+++.+||+.||++||||+||+++|+++.+
T Consensus 253 ~~~~~~~----------~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 253 GTRMRAP----------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp TCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCC----------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 2222211 1123358899999999999999999999999999864
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-46 Score=381.59 Aligned_cols=261 Identities=18% Similarity=0.227 Sum_probs=210.0
Q ss_pred ccchhhhhcccccccccCCCcceEEEEeC------CCcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEE
Q 006903 340 KLKFEDLLRAPAELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYC 411 (626)
Q Consensus 340 ~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~ 411 (626)
.+..+++. ..+.||+|+||.||+|.+. +++.||||+++..... ...|.+|++++++++|||||+++|++.
T Consensus 16 ei~~~~~~--l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~ 93 (308)
T d1p4oa_ 16 EVAREKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 93 (308)
T ss_dssp BCCGGGEE--EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred eecHHHeE--EeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence 34455553 3578999999999999853 3678999999764422 246899999999999999999999999
Q ss_pred eCCeEEEEEeecCCCChhHhhcCC-------CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC
Q 006903 412 SKQEKLLVYEYQPNGSLFNLLHGS-------ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN 484 (626)
Q Consensus 412 ~~~~~~lv~Ey~~~g~L~~~l~~~-------~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~ 484 (626)
.++..++||||+++|+|.+++... .....+++..+.+++.|+++||.||| +++|+||||||+|||++++
T Consensus 94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH----~~~ivHrDlk~~NiLld~~ 169 (308)
T d1p4oa_ 94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN----ANKFVHRDLAARNCMVAED 169 (308)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCSGGGEEECTT
T ss_pred cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh----hCCeeeceEcCCceeecCC
Confidence 999999999999999999998532 12235789999999999999999999 5789999999999999999
Q ss_pred CCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHh
Q 006903 485 MEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 485 ~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~ 559 (626)
+++||+|||+++...... ....+++.|++||......++.++|||||||++|||+||+.|+..+.+..+....+.
T Consensus 170 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~ 249 (308)
T d1p4oa_ 170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 249 (308)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred ceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 999999999987543221 223467889999998888899999999999999999999755545666666666554
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
..... +. +......+.+++.+||+.||++||||+||++.|++..+..
T Consensus 250 ~~~~~-~~----------p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~ 296 (308)
T d1p4oa_ 250 EGGLL-DK----------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 296 (308)
T ss_dssp TTCCC-CC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred hCCCC-CC----------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 43321 11 1122345889999999999999999999999999876543
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-46 Score=376.24 Aligned_cols=245 Identities=22% Similarity=0.314 Sum_probs=190.3
Q ss_pred ccccccCCCcceEEEEeC--CC--cEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD--DG--LMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~--~g--~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|++. ++ ..||||+++.... ..++|.+|++++++++|||||+++|++.+ +..++||||
T Consensus 13 ~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~ 91 (273)
T d1u46a_ 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTEL 91 (273)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred EEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeee
Confidence 467999999999999853 23 4799999875432 23579999999999999999999999865 467899999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
+++|++.+++.. ....+++..++.++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 92 ~~~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH----~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~ 165 (273)
T d1u46a_ 92 APLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMGYLE----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165 (273)
T ss_dssp CTTCBHHHHHHH--HGGGSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred ecCcchhhhhhc--ccCCCCHHHHHHHHHHHHHHHHHhh----hCCEeeeeecHHHhccccccceeeccchhhhhcccCC
Confidence 999999998863 2346999999999999999999999 5799999999999999999999999999987643321
Q ss_pred ------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 503 ------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 503 ------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
....++..|+|||......++.++|||||||++|||+| |+.||.. .+..+....+.+.....+..
T Consensus 166 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~-~~~~~~~~~i~~~~~~~~~~------- 237 (273)
T d1u46a_ 166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG-LNGSQILHKIDKEGERLPRP------- 237 (273)
T ss_dssp CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT-CCHHHHHHHHHTSCCCCCCC-------
T ss_pred CcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCC-cCHHHHHHHHHhCCCCCCCc-------
Confidence 23346778999999988889999999999999999998 8888863 45555555555443322211
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
...+..+.+++.+||+.||++||||.||.+.|++.
T Consensus 238 ---~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 238 ---EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 12223588999999999999999999999999875
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.6e-45 Score=378.06 Aligned_cols=238 Identities=21% Similarity=0.262 Sum_probs=202.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCC----CCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDW----SISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||+||+|+. .+|+.||||+++.. ....+.+.+|+.++++++|||||++++++.+++..|+|||||++
T Consensus 9 ~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g 88 (316)
T d1fota_ 9 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 88 (316)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCC
Confidence 47899999999999995 57999999998643 23457799999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|..++.. ...+++.....++.||+.||+||| +++||||||||+|||++.++.+||+|||+++.........
T Consensus 89 g~l~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH----~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 161 (316)
T d1fota_ 89 GELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLH----SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL 161 (316)
T ss_dssp CBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCC
T ss_pred ccccccccc---cccccccHHHHHHHHHHHhhhhhc----cCcEEccccCchheeEcCCCCEEEecCccceEeccccccc
Confidence 999999863 356888999999999999999999 7899999999999999999999999999998876666667
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.|++.|+|||+..+..++.++|||||||++|||+||+.||... +..+....+....... ++.....+
T Consensus 162 ~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~s~~~ 228 (316)
T d1fota_ 162 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS-NTMKTYEKILNAELRF------------PPFFNEDV 228 (316)
T ss_dssp CSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHHCCCCC------------CTTSCHHH
T ss_pred cCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCc-CHHHHHHHHHcCCCCC------------CCCCCHHH
Confidence 8999999999998888999999999999999999999999754 3444444444332211 11112347
Q ss_pred HHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 586 LQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
.+++.+||+.||++|| |++|+++
T Consensus 229 ~~li~~~L~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 229 KDLLSRLITRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp HHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHhhhCHHhccccchhhHHHHHc
Confidence 7889999999999996 8999876
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-46 Score=382.57 Aligned_cols=252 Identities=21% Similarity=0.332 Sum_probs=203.8
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||+|++ .+++.||||+++.... ...+|.+|+.+++++ +|||||+++|++.+.+..++|||
T Consensus 28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE 107 (311)
T d1t46a_ 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (311)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEE
Confidence 57899999999999984 3567999999976543 335688999999998 69999999999999999999999
Q ss_pred ecCCCChhHhhcCCC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC
Q 006903 422 YQPNGSLFNLLHGSE---------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME 486 (626)
Q Consensus 422 y~~~g~L~~~l~~~~---------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~ 486 (626)
||++|+|.++++... ....+++..++.++.||++||+||| +++||||||||+|||++.++.
T Consensus 108 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH----~~~ivHrDLKp~NIl~~~~~~ 183 (311)
T d1t46a_ 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA----SKNCIHRDLAARNILLTHGRI 183 (311)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEETTTE
T ss_pred cCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccccccccccccCc
Confidence 999999999997432 1236899999999999999999999 679999999999999999999
Q ss_pred eEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc
Q 006903 487 PCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE 561 (626)
Q Consensus 487 ~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 561 (626)
+|++|||+++...... ....+++.|++||......++.++|||||||++|||+|++.|+..+.+..+.+......
T Consensus 184 ~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~ 263 (311)
T d1t46a_ 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE 263 (311)
T ss_dssp EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHH
T ss_pred ccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc
Confidence 9999999987643322 23456888999999988889999999999999999999655554444444444444333
Q ss_pred ccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 562 EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 562 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
...... +......+.+|+.+||+.||++||||+||+++|+++..+
T Consensus 264 ~~~~~~----------~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~ 308 (311)
T d1t46a_ 264 GFRMLS----------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (311)
T ss_dssp TCCCCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCC----------cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence 222111 111234588999999999999999999999999987554
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-45 Score=381.44 Aligned_cols=238 Identities=18% Similarity=0.254 Sum_probs=199.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+|+.||||++++.. ...+.+.+|+++|++++|||||++++++.+++..|+|||||++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~g 89 (337)
T d1o6la_ 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCC
Confidence 47899999999999994 679999999997532 3456789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~ 502 (626)
|+|.+++.. ...++......++.|++.||.||| ++|||||||||+|||++.++.+||+|||+++.... ..
T Consensus 90 g~L~~~~~~---~~~~~e~~~~~~~~qil~al~ylH----~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~ 162 (337)
T d1o6la_ 90 GELFFHLSR---ERVFTEERARFYGAEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 162 (337)
T ss_dssp CBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred Cchhhhhhc---ccCCcHHHHHHHHHHHhhhhhhhh----hcCccccccCHHHeEecCCCCEEEeecccccccccCCccc
Confidence 999999964 346899999999999999999999 68999999999999999999999999999975432 22
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....||+.|+|||+.....++.++||||+||++|||+||+.||... +..+........... . +....
T Consensus 163 ~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~-~~~~~~~~i~~~~~~--~----------p~~~s 229 (337)
T d1o6la_ 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-DHERLFELILMEEIR--F----------PRTLS 229 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCC--C----------CTTSC
T ss_pred ccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCc-CHHHHHHHHhcCCCC--C----------CccCC
Confidence 3467899999999999889999999999999999999999999754 334444444333211 1 11122
Q ss_pred HHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
..+.+++.+||+.||++||+ ++|+++
T Consensus 230 ~~~~dli~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence 34788999999999999995 778876
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-45 Score=378.85 Aligned_cols=243 Identities=17% Similarity=0.267 Sum_probs=200.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||+||+|.. .+|+.||||.++........+.+|+++|+.++|||||++++++.+++..|+|||||++|+|.
T Consensus 10 ~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~ 89 (321)
T d1tkia_ 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF 89 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHH
Confidence 47899999999999985 57899999999876555567899999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC--CCeEEeeccCccccCCCc--ccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN--MEPCISEYGLIVTENHDQ--SFL 505 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGl~~~~~~~~--~~~ 505 (626)
+++.. .+..+++.++..++.||+.||.||| +.||+||||||+|||++.+ ..+||+|||+++...... ...
T Consensus 90 ~~i~~--~~~~l~e~~~~~i~~qi~~al~yLH----~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~ 163 (321)
T d1tkia_ 90 ERINT--SAFELNEREIVSYVHQVCEALQFLH----SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL 163 (321)
T ss_dssp HHHTS--SSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEE
T ss_pred HHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HcCCCcccccccceeecCCCceEEEEcccchhhccccCCccccc
Confidence 99963 3346999999999999999999999 5799999999999999854 579999999987644322 334
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.+++.|++||......++.++||||+||++|||+||+.||... +..+.+..+....... +.... . .....+
T Consensus 164 ~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~-~~~~~~~~i~~~~~~~---~~~~~-~----~~s~~~ 234 (321)
T d1tkia_ 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE-TNQQIIENIMNAEYTF---DEEAF-K----EISIEA 234 (321)
T ss_dssp ESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHHTCCCC---CHHHH-T----TSCHHH
T ss_pred ccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCC---Chhhc-c----CCCHHH
Confidence 6788899999988888899999999999999999999999754 3344444444433221 11110 1 112347
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+++.+||+.||++|||++|+++
T Consensus 235 ~~li~~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 235 MDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHccCChhHCcCHHHHhc
Confidence 88999999999999999999987
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-45 Score=374.98 Aligned_cols=249 Identities=19% Similarity=0.269 Sum_probs=195.5
Q ss_pred ccccccCCCcceEEEEeC--------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEE
Q 006903 351 AELLGRGKHGSLYRVVLD--------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLV 419 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~--------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv 419 (626)
.+.||+|+||.||+|+.. ++..||||+++.... ...++.+|...+.++ +|||||+++++|.+++..++|
T Consensus 18 ~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v 97 (299)
T d1fgka_ 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 97 (299)
T ss_dssp EEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEE
Confidence 478999999999999842 235799999976543 235788899998888 899999999999999999999
Q ss_pred EeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC
Q 006903 420 YEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME 486 (626)
Q Consensus 420 ~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~ 486 (626)
|||+++|+|.+++..... ...+++..+++++.|++.||+||| +.+||||||||+|||++.++.
T Consensus 98 ~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH----~~~ivHrDiKp~NiLl~~~~~ 173 (299)
T d1fgka_ 98 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLAARNVLVTEDNV 173 (299)
T ss_dssp ECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTCC
T ss_pred EEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh----hCCEEeeeecccceeecCCCC
Confidence 999999999999975321 246899999999999999999999 679999999999999999999
Q ss_pred eEEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhh
Q 006903 487 PCISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVR 560 (626)
Q Consensus 487 ~kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 560 (626)
+||+|||+++..... .....++..|++||......++.++|||||||++|||+| |+.||.. .+..+....+.
T Consensus 174 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~-~~~~~~~~~i~- 251 (299)
T d1fgka_ 174 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK- 251 (299)
T ss_dssp EEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-CCHHHHHHHHH-
T ss_pred eEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCC-CCHHHHHHHHH-
Confidence 999999998754322 223456778999999888899999999999999999999 5666653 33333333322
Q ss_pred cccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 561 EEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 561 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
....... +...+..+.+++.+||+.||++|||+.||++.|+++..
T Consensus 252 ~~~~~~~----------p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 252 EGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp TTCCCCC----------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCC----------CccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 2222111 11123358899999999999999999999999998854
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.2e-45 Score=370.95 Aligned_cols=248 Identities=20% Similarity=0.241 Sum_probs=196.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-C---HHHHHHHHHHhccCCCCCccccceEEEeCC----eEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-S---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ----EKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~----~~~lv~E 421 (626)
.+.||+|+||.||+|+. .+|+.||||+++.... . .+.+.+|++++++++|||||++++++...+ ..|+|||
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE 91 (277)
T d1o6ya_ 12 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 91 (277)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred eEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEE
Confidence 47899999999999984 6799999999976543 2 246889999999999999999999988754 3789999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH- 500 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~- 500 (626)
|+++|+|.+++.. ...+++.++..++.||+.||+||| ++|||||||||+|||++.++..+++|||.+.....
T Consensus 92 ~~~g~~L~~~~~~---~~~l~~~~~~~i~~qi~~al~~lH----~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~ 164 (277)
T d1o6ya_ 92 YVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSH----QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 164 (277)
T ss_dssp CCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTSCEEECCCTTCEECC--
T ss_pred CCCCCEehhhhcc---cCCCCHHHHHHHHHHHHHHHHHHH----hCCccCccccCcccccCccccceeehhhhhhhhccc
Confidence 9999999999853 346999999999999999999999 57999999999999999999999999998754321
Q ss_pred -----CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 501 -----DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 501 -----~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
......|++.|+|||+.....++.++|||||||++|||+||+.||.... ..+............. ..
T Consensus 165 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-~~~~~~~~~~~~~~~~----~~--- 236 (277)
T d1o6ya_ 165 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-PVSVAYQHVREDPIPP----SA--- 236 (277)
T ss_dssp --------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHCCCCCG----GG---
T ss_pred cccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcC-HHHHHHHHHhcCCCCC----ch---
Confidence 1233467899999999988889999999999999999999999997543 3334444333322110 00
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHhhh
Q 006903 576 AASEERMLKLLQVALRCINQSPNERP-SMNQVAVMINNIK 614 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~ev~~~L~~i~ 614 (626)
..+..+..+.+++.+||+.||++|| |++++.+.|.+++
T Consensus 237 -~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 237 -RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp -TSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -hccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 0111234588899999999999999 8999999998875
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.3e-44 Score=376.48 Aligned_cols=238 Identities=17% Similarity=0.175 Sum_probs=202.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++|+.++|||||++++++.+.+..++||||+.+
T Consensus 46 ~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~ 125 (350)
T d1rdqe_ 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccc
Confidence 37899999999999985 579999999986432 3446789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|.+++.. ...+++..+..++.||+.||.||| +++||||||||+|||++.++.+||+|||+++.........
T Consensus 126 g~l~~~l~~---~~~l~e~~~~~i~~qi~~aL~yLH----~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~ 198 (350)
T d1rdqe_ 126 GEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL 198 (350)
T ss_dssp CBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCC
T ss_pred cchhhhHhh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccc
Confidence 999999963 246899999999999999999999 6799999999999999999999999999998776666667
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.|++.|+|||+.....++.++|||||||++|||+||+.||... +.......+....... +......+
T Consensus 199 ~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~s~~~ 265 (350)
T d1rdqe_ 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD-QPIQIYEKIVSGKVRF------------PSHFSSDL 265 (350)
T ss_dssp EECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTTCCHHH
T ss_pred cCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCc-CHHHHHHHHhcCCCCC------------CccCCHHH
Confidence 8899999999998888999999999999999999999999743 4444444444332111 11122347
Q ss_pred HHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 586 LQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
.+++.+||+.||++|+ |++|+++
T Consensus 266 ~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHhhhCHHhccccccccHHHHHc
Confidence 8899999999999994 8999976
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.3e-44 Score=364.33 Aligned_cols=242 Identities=18% Similarity=0.265 Sum_probs=196.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----------HHHHHHHHHHhccCC-CCCccccceEEEeCCeEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----------SEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----------~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~l 418 (626)
.+.||+|+||+||+|+. .+|+.||||+++..... .+.+.+|+.++++++ |||||++++++.+++..|+
T Consensus 8 ~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~i 87 (277)
T d1phka_ 8 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 87 (277)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred ceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEE
Confidence 57899999999999985 57999999998764421 135789999999997 9999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
|||||++|+|.++++. ...+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++..
T Consensus 88 vmE~~~~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 160 (277)
T d1phka_ 88 VFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 160 (277)
T ss_dssp EEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEcCCCchHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HcCCcccccccceEEEcCCCCeEEccchheeEc
Confidence 9999999999999963 347999999999999999999999 579999999999999999999999999999764
Q ss_pred CC--Cccccccccccchhhccc------cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 499 NH--DQSFLAQTSSLKINDISN------QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 499 ~~--~~~~~~~~~~~~~pe~~~------~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
.. ......++..|++||... ...++.++||||+||++|||+||+.||.... .......+......... +
T Consensus 161 ~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~-~~~~~~~i~~~~~~~~~--~ 237 (277)
T d1phka_ 161 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-QMLMLRMIMSGNYQFGS--P 237 (277)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCCCT--T
T ss_pred cCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCC-HHHHHHHHHhCCCCCCC--c
Confidence 33 233456788899999764 2345889999999999999999999998543 33333344433221110 0
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
........+.+++.+||+.||++|||++||++
T Consensus 238 ------~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 238 ------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp ------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ------ccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 00112235889999999999999999999865
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-45 Score=371.83 Aligned_cols=249 Identities=17% Similarity=0.212 Sum_probs=190.3
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC------HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS------SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
++||+|+||+||+|+. .+|+.||||+++..... .+.+.+|++++++++|||||++++++.+++..|+||||+.
T Consensus 4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~ 83 (299)
T d1ua2a_ 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME 83 (299)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhc
Confidence 6899999999999995 57999999999754321 2468899999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
++++..+.. ....+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH----~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~ 156 (299)
T d1ua2a_ 84 TDLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLH----QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 156 (299)
T ss_dssp EEHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred chHHhhhhh---cccCCCHHHHHHHHHHHHHHHHHhh----ccceecccCCcceEEecCCCccccccCccccccCCCccc
Confidence 887776663 3456888999999999999999999 679999999999999999999999999998754332
Q ss_pred ccccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc--ccccc---------
Q 006903 502 QSFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT--VEVFD--------- 569 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~d--------- 569 (626)
.....+++.|++||... ...++.++|||||||++|||+||+.||....+. +....+...... .+...
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~-~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T d1ua2a_ 157 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWPDMCSLPDYV 235 (299)
T ss_dssp CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHH-HHHHHHHHhcCCCChhhccchhccchhh
Confidence 22346789999999875 446799999999999999999999998754332 222222211000 00000
Q ss_pred -----HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 570 -----EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 570 -----~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+..............+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~ 279 (299)
T d1ua2a_ 236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279 (299)
T ss_dssp CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence 000000000112245889999999999999999999986
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-44 Score=375.09 Aligned_cols=242 Identities=17% Similarity=0.267 Sum_probs=190.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhcc-CCCCCccccceEEEe----CCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDH-VKHPNVLPPLAYYCS----KQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~-l~H~nIv~l~g~~~~----~~~~~lv~Ey~~ 424 (626)
.++||+|+||+||+|+. .+++.||||+++. .+.+.+|++++.+ .+|||||+++++|.+ +...|+|||||+
T Consensus 17 ~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~ 92 (335)
T d2ozaa1 17 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 92 (335)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred eEEeeeccCeEEEEEEECCCCCEEEEEEECC----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCC
Confidence 46799999999999984 6799999999864 3578889998654 589999999999875 456899999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCccccCC-
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENH- 500 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~~~- 500 (626)
+|+|.+++... ....+++.++..++.|++.||+||| +.+|+||||||+|||+++ ++.+||+|||+++....
T Consensus 93 gg~L~~~i~~~-~~~~l~e~~~~~i~~qi~~al~ylH----~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~ 167 (335)
T d2ozaa1 93 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 167 (335)
T ss_dssp SEEHHHHHHSC-SCCCEEHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCC
T ss_pred CCcHHHHHHhc-CCCCcCHHHHHHHHHHHHHHHHHHH----HcCCccccccccccccccccccccccccccceeeeccCC
Confidence 99999999742 2357999999999999999999999 679999999999999986 55799999999875432
Q ss_pred -CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcch--hHHHHHHhhcccccccccHHHHhhhc
Q 006903 501 -DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNL--ATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 501 -~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
......+++.|+|||......++.++|||||||++|||+||+.||...... ...+........ .....+ .
T Consensus 168 ~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~-~~~~~~------~ 240 (335)
T d2ozaa1 168 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ-YEFPNP------E 240 (335)
T ss_dssp CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCS-SSCCTT------H
T ss_pred CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCC-CCCCCc------c
Confidence 234457899999999998888999999999999999999999999643221 111111111000 000000 1
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 271 (335)
T d2ozaa1 241 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 271 (335)
T ss_dssp HHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1122345889999999999999999999987
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.5e-44 Score=376.20 Aligned_cols=239 Identities=18% Similarity=0.181 Sum_probs=190.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHH---HHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKN---RMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~---ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|+. .+|+.||||++.... .....+.+ |+++++.++|||||++++++.+++..|+||||
T Consensus 9 ~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~ 88 (364)
T d1omwa3 9 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 88 (364)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEe
Confidence 47899999999999995 579999999986432 22333444 47778888999999999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-C
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-D 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~ 501 (626)
+++|+|.+++.. ...+++..+..++.||+.||.||| +++||||||||+|||++.++.+||+|||+++.... .
T Consensus 89 ~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~ylH----~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~ 161 (364)
T d1omwa3 89 MNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 161 (364)
T ss_dssp CCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSC
T ss_pred cCCCcHHHHHHh---cccccHHHHHHHHHHHHHHHHHHH----HCCccceeeccceeEEcCCCcEEEeeeceeeecCCCc
Confidence 999999999963 356889999999999999999999 67999999999999999999999999999976433 3
Q ss_pred ccccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc--hhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 502 QSFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFN--LATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
.....||+.|+|||+.. ...++.++|||||||++|||+||+.||..... ............. . .+
T Consensus 162 ~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~--~----------~~ 229 (364)
T d1omwa3 162 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV--E----------LP 229 (364)
T ss_dssp CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCC--C----------CC
T ss_pred ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCC--C----------CC
Confidence 34467899999999875 45689999999999999999999999974322 2222221111110 0 01
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
......+.+++.+||+.||++||| ++|+++
T Consensus 230 ~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 230 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp SSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred CCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 112234788999999999999999 578765
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-44 Score=364.19 Aligned_cols=257 Identities=16% Similarity=0.192 Sum_probs=193.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..|+||||+.++
T Consensus 7 ~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~ 86 (298)
T d1gz8a_ 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 86 (298)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred ccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCCc
Confidence 37899999999999994 6799999999975432 3467999999999999999999999999999999999999764
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~ 503 (626)
+.+++.. .....+++..+..++.|++.||+||| +++||||||||+|||++.++.+||+|||+++..... ..
T Consensus 87 -~~~~~~~-~~~~~l~e~~~~~~~~qil~~L~yLH----~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~ 160 (298)
T d1gz8a_ 87 -LKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCH----SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 160 (298)
T ss_dssp -HHHHHHH-TTTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTT
T ss_pred -hhhhhhh-hcccCCCHHHHHHHHHHHHHHHHHhh----cCCEEccccCchheeecccCcceeccCCcceeccCCcccce
Confidence 4444432 23457999999999999999999999 679999999999999999999999999998654332 23
Q ss_pred ccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHH---------
Q 006903 504 FLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLI--------- 573 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--------- 573 (626)
...++..|++||..... .++.++|||||||++|||++|+.||........+...........+...+...
T Consensus 161 ~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (298)
T d1gz8a_ 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240 (298)
T ss_dssp CCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTS
T ss_pred eecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccccccc
Confidence 44688899999976554 45889999999999999999999997544332222211110000000000000
Q ss_pred -h------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhh
Q 006903 574 -A------EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNI 613 (626)
Q Consensus 574 -~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i 613 (626)
. ..........+.+++.+||+.||++|||++|+++. ++++
T Consensus 241 ~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~ 289 (298)
T d1gz8a_ 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289 (298)
T ss_dssp CCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred ccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence 0 00001122457889999999999999999999874 5554
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-44 Score=368.97 Aligned_cols=238 Identities=19% Similarity=0.280 Sum_probs=195.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCC----CCCHHHHHHHHHHhc-cCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDW----SISSEDFKNRMQKID-HVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~ei~~l~-~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||+||+|+. .+|+.||||++++. ....+.+..|+.++. .++|||||++++++.+++..|+|||||+
T Consensus 7 ~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~ 86 (320)
T d1xjda_ 7 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 86 (320)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecC
Confidence 47899999999999995 57999999999643 234456777777765 6899999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~ 501 (626)
+|+|.++++. ...++...+..++.||+.||.||| +++|+||||||+|||+++++.+||+|||+++... ..
T Consensus 87 ~g~L~~~i~~---~~~~~e~~~~~~~~qi~~al~ylH----~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~ 159 (320)
T d1xjda_ 87 GGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 159 (320)
T ss_dssp TCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCcHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCcccceeecCCCceeccccchhhhccccccc
Confidence 9999999963 346899999999999999999999 6799999999999999999999999999987532 22
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....|++.|+|||+.....++.++|||||||++|||+||+.||.+. +..+....+....... +...
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~-~~~~~~~~i~~~~~~~------------p~~~ 226 (320)
T d1xjda_ 160 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ-DEEELFHSIRMDNPFY------------PRWL 226 (320)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTTS
T ss_pred ccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCC------------CccC
Confidence 33456889999999999989999999999999999999999999754 3334343333322110 1112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHH-HHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMN-QVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~-ev~~ 608 (626)
...+.+++.+||+.||++|||+. |+++
T Consensus 227 s~~~~dli~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 227 EKEAKDLLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp CHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred CHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence 23478999999999999999995 6753
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.5e-43 Score=357.47 Aligned_cols=250 Identities=17% Similarity=0.174 Sum_probs=191.8
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||+||+|+..+|+.||||+++... ...+.+.+|+.+|++++|||||++++++..++..+++|||+.++.
T Consensus 7 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~ 86 (286)
T d1ob3a_ 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL 86 (286)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEH
T ss_pred ccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhh
Confidence 37899999999999999899999999997643 234689999999999999999999999999999999999998877
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~ 504 (626)
+..+.. ....++...+..++.||+.||+||| +.+||||||||+|||++.++.+|++|||.+...... ...
T Consensus 87 ~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH----~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 159 (286)
T d1ob3a_ 87 KKLLDV---CEGGLESVTAKSFLLQLLNGIAYCH----DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159 (286)
T ss_dssp HHHHHT---STTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred HHHHHh---hcCCcchhhhHHHHHHHHHHHHHhc----cCcEEecCCCCceeeEcCCCCEEecccccceecccCccccce
Confidence 777764 3467999999999999999999999 579999999999999999999999999998653322 233
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc--ccccc---------cHHH
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW--TVEVF---------DEVL 572 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~---------d~~~ 572 (626)
..+++.|++||.... ..++.++|||||||++|||++|+.||...... +....+..... ..... +...
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T d1ob3a_ 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (286)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred ecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHH-HHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence 456778888887654 45689999999999999999999999754332 22222211000 00000 0000
Q ss_pred ------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 ------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.....+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000011112345789999999999999999999974
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-44 Score=358.02 Aligned_cols=237 Identities=18% Similarity=0.287 Sum_probs=190.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-------CHHHHHHHHHHhccCC--CCCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-------SSEDFKNRMQKIDHVK--HPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~ei~~l~~l~--H~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||+||+|+. .+|+.||||+++.... ....+.+|++++++++ |||||++++++.+++..++||
T Consensus 9 ~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~ 88 (273)
T d1xwsa_ 9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 88 (273)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred eEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEE
Confidence 47899999999999994 5799999999875432 1234778999999987 899999999999999999999
Q ss_pred eecCC-CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCcccc
Q 006903 421 EYQPN-GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTE 498 (626)
Q Consensus 421 Ey~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~ 498 (626)
||+.+ +++.+++.. ...+++..+..++.|++.||+||| +++|+||||||+|||++. ++.+||+|||+++..
T Consensus 89 e~~~~~~~l~~~~~~---~~~l~e~~~~~~~~qi~~al~~lH----~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~ 161 (273)
T d1xwsa_ 89 ERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCH----NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 161 (273)
T ss_dssp ECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeccCcchHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCccccCcccceEEecCCCeEEECccccceec
Confidence 99976 678888853 356999999999999999999999 679999999999999985 478999999998754
Q ss_pred CCC-ccccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 499 NHD-QSFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 499 ~~~-~~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
... .....||..|+|||+.....+ +.++|||||||++|||+||+.||.... .+...... +. ..
T Consensus 162 ~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-------~i~~~~~~---~~-----~~ 226 (273)
T d1xwsa_ 162 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVF---FR-----QR 226 (273)
T ss_dssp CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHCCCC---CS-----SC
T ss_pred ccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-------HHhhcccC---CC-----CC
Confidence 332 344578999999998765544 677999999999999999999997421 11111111 00 11
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhh
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNI 613 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i 613 (626)
. ...+.+++.+||+.||++|||++|+++ .++++
T Consensus 227 ~----s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 261 (273)
T d1xwsa_ 227 V----SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261 (273)
T ss_dssp C----CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred C----CHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 2 234788999999999999999999987 35544
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-42 Score=359.50 Aligned_cols=257 Identities=18% Similarity=0.239 Sum_probs=187.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~Ey~ 423 (626)
.++||+|+||+||+|+. .+|+.||||+++.... ...+|+++|++++|||||+++++|... ...++|||||
T Consensus 25 ~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~ 101 (350)
T d1q5ka_ 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 101 (350)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECC
T ss_pred eeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEecc
Confidence 47899999999999995 5799999999976432 234799999999999999999998643 2478999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCccccCC--
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTENH-- 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~~~-- 500 (626)
++|.+..+.+.......+++..+..++.||+.||+||| ++||+||||||+|||++.++ .+||+|||+++....
T Consensus 102 ~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH----~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~ 177 (350)
T d1q5ka_ 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177 (350)
T ss_dssp SEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS
T ss_pred CCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH----hcCCcccCCCcceEEEecCCCceeEecccchhhccCCc
Confidence 87654444332234457999999999999999999999 78999999999999999775 899999999875432
Q ss_pred Cccccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc---c-----------ccc
Q 006903 501 DQSFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE---E-----------WTV 565 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~---~-----------~~~ 565 (626)
......++..|++||... ...++.++||||+||++|||++|+.||........ ...+... . ...
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~-l~~i~~~~g~~~~~~~~~~~~~~~~ 256 (350)
T d1q5ka_ 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTE 256 (350)
T ss_dssp CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHHHCC---C
T ss_pred ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHH-HHHHHHHhCCChHHhhhhhccchhh
Confidence 223345677788888654 55789999999999999999999999975433222 2111110 0 000
Q ss_pred cccc---HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhh
Q 006903 566 EVFD---EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIKE 615 (626)
Q Consensus 566 ~~~d---~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~~ 615 (626)
..+. ...............+.+|+.+||+.||++|||+.|+++ .++++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 257 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp CCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred ccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence 0000 000000011122345788999999999999999999986 3555543
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-42 Score=353.07 Aligned_cols=256 Identities=16% Similarity=0.231 Sum_probs=190.5
Q ss_pred ccccccCCCcceEEEEe-CC-CcEEEEEEcCCCC---CCHHHHHHHHHHhccC---CCCCccccceEEEe-----CCeEE
Q 006903 351 AELLGRGKHGSLYRVVL-DD-GLMLAVKRLRDWS---ISSEDFKNRMQKIDHV---KHPNVLPPLAYYCS-----KQEKL 417 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~-g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l---~H~nIv~l~g~~~~-----~~~~~ 417 (626)
.+.||+|+||+||+|+. .+ ++.||||+++... .....+.+|+++++.+ +||||++++++|.. ....+
T Consensus 12 ~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~ 91 (305)
T d1blxa_ 12 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 91 (305)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred EEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEE
Confidence 46899999999999985 44 6789999986533 2234566777776655 89999999999863 24679
Q ss_pred EEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 418 LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
++|||+.+|.+..... .....+++..+..++.|++.||+||| +++||||||||+|||+++++.+||+|||+++.
T Consensus 92 ~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~yLH----~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~ 165 (305)
T d1blxa_ 92 LVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 165 (305)
T ss_dssp EEEECCSCBHHHHHHH--SCTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEEEeccCCchhhhhh--ccCCCCCHHHHHHHHHHHHHHHHHHH----hCCEEecCCCccEEEEcCCCCeeecchhhhhh
Confidence 9999999887765554 23457899999999999999999999 67999999999999999999999999999865
Q ss_pred cCC--CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-------ccccccc
Q 006903 498 ENH--DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-------EWTVEVF 568 (626)
Q Consensus 498 ~~~--~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~ 568 (626)
... ......+|+.|+|||+.....++.++||||+||++|||+||+.||...... +....+... .+.....
T Consensus 166 ~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 244 (305)
T d1blxa_ 166 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEEDWPRDVA 244 (305)
T ss_dssp CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCGGGSCTTCS
T ss_pred hcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhhCCCchhccccccc
Confidence 432 234457899999999998889999999999999999999999999754332 222222111 0000000
Q ss_pred cH--HH------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhh
Q 006903 569 DE--VL------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNI 613 (626)
Q Consensus 569 d~--~~------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i 613 (626)
.+ .. ............+.+|+.+||+.||++|||++|+++. ++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i 299 (305)
T d1blxa_ 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 299 (305)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred chhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence 00 00 0000111122357789999999999999999999863 4444
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-41 Score=354.86 Aligned_cols=255 Identities=18% Similarity=0.243 Sum_probs=191.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCC------eEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQ------EKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~------~~~lv~ 420 (626)
.+.||+|+||+||+|.. .+|+.||||+++...... +.+.+|+++|++++|||||+++++|...+ ..|+||
T Consensus 23 i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~ 102 (346)
T d1cm8a_ 23 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 102 (346)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEE
Confidence 36899999999999994 579999999998654333 46889999999999999999999987654 469999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+ +++|..+.+. ..+++..+..++.|++.||.||| ++|||||||||+|||++.++.+|++|||+++....
T Consensus 103 e~~-~~~l~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH----~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~ 173 (346)
T d1cm8a_ 103 PFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIH----AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 173 (346)
T ss_dssp ECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ecc-cccHHHHHHh----ccccHHHHHHHHHHHHHHHHHHH----hCCCcccccCcchhhcccccccccccccceeccCC
Confidence 999 5678877752 46999999999999999999999 67999999999999999999999999999988777
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc-cccc--------cH
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT-VEVF--------DE 570 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~--------d~ 570 (626)
..+...+++.|++||.... ..++.++||||+||++|||++|+.||................... .+.. ..
T Consensus 174 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (346)
T d1cm8a_ 174 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 253 (346)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHH
T ss_pred ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhh
Confidence 6667778999999998754 456899999999999999999999997554332221111000000 0000 00
Q ss_pred HHH---------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhhh
Q 006903 571 VLI---------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNIK 614 (626)
Q Consensus 571 ~~~---------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i~ 614 (626)
... ...........+.+|+.+||+.||++|||++|+++. ++++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 254 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp HHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 000 000001112357889999999999999999999874 66554
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-42 Score=347.07 Aligned_cols=251 Identities=17% Similarity=0.144 Sum_probs=198.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||+||+|+. .+++.||||+++.... ..+.+.+|+.++++++|||||++++++.+.+..++||||+.++
T Consensus 7 i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~ 86 (292)
T d1unla_ 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD 86 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEE
T ss_pred eeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeecccc
Confidence 37899999999999994 6789999999865442 2467899999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~ 503 (626)
++..++.. ...+++..+..++.|++.||+||| +++||||||||+|||++.++.+|++|||.++..... ..
T Consensus 87 ~l~~~~~~---~~~~~~~~~~~~~~q~~~aL~~lH----~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~ 159 (292)
T d1unla_ 87 LKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCH----SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159 (292)
T ss_dssp HHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCC
T ss_pred cccccccc---ccccchhHHHHHHHHHHHHHHHhh----cCCEeeecccCcccccccCCceeeeecchhhcccCCCccce
Confidence 99888853 356889999999999999999999 579999999999999999999999999998764332 23
Q ss_pred ccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccc--cc------------
Q 006903 504 FLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVE--VF------------ 568 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~------------ 568 (626)
...++..+++||..... .++.++|||||||++|||++|+.||..+.+..+....+........ ..
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (292)
T d1unla_ 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccc
Confidence 34567788899987654 4689999999999999999999998777666665554332111000 00
Q ss_pred ---cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 569 ---DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 569 ---d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
................+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000000011122345788999999999999999999976
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-41 Score=346.90 Aligned_cols=251 Identities=17% Similarity=0.157 Sum_probs=185.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEe--------CCeEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCS--------KQEKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~--------~~~~~l 418 (626)
.+.||+|+||+||+|+. .+|+.||||++.... ...+++.+|+++|++++||||+++++++.. ++..++
T Consensus 15 ~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~i 94 (318)
T d3blha1 15 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 94 (318)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEE
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEE
Confidence 37899999999999995 679999999986543 234678999999999999999999998765 345799
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+.++.+..+.. ....++...+..++.|++.||.||| ++||+||||||+|||++.++.+|++|||+++..
T Consensus 95 v~e~~~~~~~~~~~~---~~~~~~~~~~~~i~~qil~~l~~lH----~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~ 167 (318)
T d3blha1 95 VFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIH----RNKILHRDMKAANVLITRDGVLKLADFGLARAF 167 (318)
T ss_dssp EEECCCEEHHHHHTC---TTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCCCccchhhh---cccccccHHHHHHHHHHHHHHHHhc----cCCEEecCcCchheeecCCCcEEeeecceeeec
Confidence 999998877765553 3456888999999999999999999 679999999999999999999999999998643
Q ss_pred CC-------Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc--ccccc-
Q 006903 499 NH-------DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE--WTVEV- 567 (626)
Q Consensus 499 ~~-------~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~~- 567 (626)
.. ......+|..|++||.... ..++.++|||||||++|||+||+.||.+..+. .....+.... ...+.
T Consensus 168 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~ 246 (318)
T d3blha1 168 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-HQLALISQLCGSITPEVW 246 (318)
T ss_dssp CC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTS
T ss_pred ccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHH-HHHHHHHHhcCCCChhhc
Confidence 21 1122457889999998754 46789999999999999999999999754332 2222111100 00000
Q ss_pred --c-----cHH----------HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 568 --F-----DEV----------LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 568 --~-----d~~----------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
. ... .............+.+++.+||+.||++|||++|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp TTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 0 000 00000000112346789999999999999999999763
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-41 Score=350.48 Aligned_cols=255 Identities=16% Similarity=0.209 Sum_probs=187.4
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCC----eEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ----EKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~----~~~lv~Ey~ 423 (626)
.+.||+|+||+||+|+ ..+|+.||||+++.... ..+.+.+|+++|++++||||+++++++.... ..++++||+
T Consensus 13 ~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~ 92 (345)
T d1pmea_ 13 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHL 92 (345)
T ss_dssp EEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEee
Confidence 3789999999999998 46899999999976442 2357889999999999999999999987653 235556677
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-- 501 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-- 501 (626)
.+|+|.+++.. ..+++..+..++.|++.||+||| ++|||||||||+|||+++++.+||+|||++......
T Consensus 93 ~~g~L~~~l~~----~~l~~~~i~~i~~qil~al~yLH----~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~ 164 (345)
T d1pmea_ 93 MGADLYKLLKT----QHLSNDHICYFLYQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 164 (345)
T ss_dssp CCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred cCCchhhhhhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCc
Confidence 89999999963 35899999999999999999999 679999999999999999999999999998643221
Q ss_pred ----ccccccccccchhhcc-ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc-cc----ccHH
Q 006903 502 ----QSFLAQTSSLKINDIS-NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV-EV----FDEV 571 (626)
Q Consensus 502 ----~~~~~~~~~~~~pe~~-~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~----~d~~ 571 (626)
.....+++.|++||.. ....++.++||||+||++|||++|+.||.................... .. ....
T Consensus 165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T d1pmea_ 165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 244 (345)
T ss_dssp BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhh
Confidence 2334578899999987 445678899999999999999999999975433222211110000000 00 0000
Q ss_pred HH-------h------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhh
Q 006903 572 LI-------A------EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNI 613 (626)
Q Consensus 572 ~~-------~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i 613 (626)
.. . ..........+.+++.+||+.||++|||++|+++. |+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~ 301 (345)
T d1pmea_ 245 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 301 (345)
T ss_dssp HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred hhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 00 0 00000112357899999999999999999999874 4443
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.1e-40 Score=336.82 Aligned_cols=252 Identities=13% Similarity=0.133 Sum_probs=197.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCC-CCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKH-PNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H-~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||+||+|+. .+|+.||||.+.... ..+.+.+|+++++.+.| +|++.+++++......++||||+ +|+|
T Consensus 10 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l 87 (293)
T d1csna_ 10 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 87 (293)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCH
Confidence 47899999999999994 579999999886532 33457888889988875 89999999999999999999999 6899
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-----CCCeEEeeccCccccCC---
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-----NMEPCISEYGLIVTENH--- 500 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-----~~~~kl~DFGl~~~~~~--- 500 (626)
.+++.. ....+++..+..++.|++.||+||| ++||+||||||+|||++. ++.+||+|||+++....
T Consensus 88 ~~~~~~--~~~~~~~~~~~~i~~q~~~~l~~lH----~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~ 161 (293)
T d1csna_ 88 EDLLDL--CGRKFSVKTVAMAAKQMLARVQSIH----EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 161 (293)
T ss_dssp HHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred HHHHHh--hccchhhHHHHHHHHHHHHHHHHHH----HCCceeccCCccceeecCcccccCCceEEcccceeEEcccCcc
Confidence 999864 3356899999999999999999999 789999999999999974 56799999999875321
Q ss_pred -------CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc--hhHHHHHHhhcccccccccHH
Q 006903 501 -------DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN--LATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 501 -------~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~d~~ 571 (626)
......||+.|+|||......++.++|||||||++|||+||+.||..... .......+...... ....
T Consensus 162 ~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~---~~~~ 238 (293)
T d1csna_ 162 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS---TPLR 238 (293)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH---SCHH
T ss_pred ccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCC---CChH
Confidence 12234689999999999888899999999999999999999999974322 22222222111100 0000
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
......+.++.+++..|++.+|++||+++.+.+.|+++....
T Consensus 239 ----~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~ 280 (293)
T d1csna_ 239 ----ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 280 (293)
T ss_dssp ----HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ----HhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence 001112345888889999999999999999999998876543
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-40 Score=339.50 Aligned_cols=250 Identities=14% Similarity=0.167 Sum_probs=189.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceE-EEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAY-YCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~-~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|+. .+|+.||||.+.... ..+++.+|+++++.++|+|++..++. +...+..++||||+. |++
T Consensus 12 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~-~~l 89 (299)
T d1ckia_ 12 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG-PSL 89 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC-CBH
T ss_pred eEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC-Cch
Confidence 47899999999999984 679999999887543 33468899999999998877666555 466778899999995 567
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC---CCCCeEEeeccCccccCCC----
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN---NNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGl~~~~~~~---- 501 (626)
.+.+.. ....+++..+..++.|++.||+||| +++||||||||+|||++ .+..+|++|||+++.....
T Consensus 90 ~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH----~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~ 163 (299)
T d1ckia_ 90 EDLFNF--CSRKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 163 (299)
T ss_dssp HHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCC
T ss_pred hhhhhh--ccCCCcHHHHHHHHHHHHHHHHHHH----HCCeeeccCCHhhccccccCCCceeeeeccCcceecccccccc
Confidence 666643 3357999999999999999999999 67999999999999876 4567999999998753221
Q ss_pred ------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--HHHHhhcccccccccHHHH
Q 006903 502 ------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW--VHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~ 573 (626)
.....+|+.|+|||......++.++|||||||++|||+||+.||......... ......... . ...
T Consensus 164 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~--~-~~~--- 237 (299)
T d1ckia_ 164 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM--S-TPI--- 237 (299)
T ss_dssp BCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHH--H-SCH---
T ss_pred ceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccC--C-CCh---
Confidence 12346889999999998888999999999999999999999999643221111 111111000 0 000
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
+......+..+.+++.+||+.+|++||+++++.+.|+.+..
T Consensus 238 -~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 238 -EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp -HHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred -hHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence 00111223458889999999999999999999999988744
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2e-40 Score=342.69 Aligned_cols=246 Identities=15% Similarity=0.215 Sum_probs=188.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CCCccccceEEEeC--CeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSK--QEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~--~~~~lv~Ey~~~g 426 (626)
.+.||+|+||+||+|+. .+|+.||||+++. ...+++.+|+++|++++ ||||+++++++... ...++||||+.+|
T Consensus 40 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~--~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~ 117 (328)
T d3bqca1 40 VRKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 117 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECS--SCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSC
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEECH--HHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCC
Confidence 47899999999999995 6799999999875 34678999999999995 99999999998754 4689999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCccccCC--Ccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTENH--DQS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~~~--~~~ 503 (626)
+|..+. +.++...+..++.||+.||.||| ++|||||||||+|||++.++ .+||+|||+++.... ...
T Consensus 118 ~L~~~~------~~l~e~~i~~i~~qil~aL~~LH----~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~ 187 (328)
T d3bqca1 118 DFKQLY------QTLTDYDIRFYMYEILKALDYCH----SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 187 (328)
T ss_dssp BGGGTT------TSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCC
T ss_pred cHHHHh------cCCCHHHHHHHHHHHHHHHHHHh----hcccccccccccceEEcCCCCeeeecccccceeccCCCccc
Confidence 998765 35899999999999999999999 67999999999999998655 589999999875433 234
Q ss_pred ccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-------------ccc-cccc
Q 006903 504 FLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-------------EWT-VEVF 568 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-------------~~~-~~~~ 568 (626)
...++..|++||..... .++.++||||+||++|||++|+.||..+.+.......+... ... ...+
T Consensus 188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 267 (328)
T d3bqca1 188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 267 (328)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGG
T ss_pred ccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCccc
Confidence 45678889999986654 57899999999999999999999997655433221111100 000 0000
Q ss_pred c-----------HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 569 D-----------EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 569 d-----------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. ...............+.+|+.+||+.||++|||++|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 268 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp GGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred chhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 000000001112335789999999999999999999976
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-40 Score=344.84 Aligned_cols=255 Identities=20% Similarity=0.238 Sum_probs=191.3
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeC-----CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSK-----QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lv~E 421 (626)
.+.||+|+||+||+|+ ..+|+.||||+++...... +.+.+|+++|++++|||||++++++... ...+++||
T Consensus 23 ~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~ 102 (348)
T d2gfsa1 23 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102 (348)
T ss_dssp EEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEE
Confidence 4789999999999998 4679999999998655433 4688999999999999999999998643 34577788
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+.+|+|.+++.. ..+++..+..++.||+.||+||| ++||+||||||+|||++.++.+|++|||++......
T Consensus 103 ~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~LH----~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~ 174 (348)
T d2gfsa1 103 HLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 174 (348)
T ss_dssp ECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCC----CCTGG
T ss_pred eecCCchhhhccc----ccccHHHHHHHHHHHHHHHHHHH----hCCCcccccCCccccccccccccccccchhcccCcc
Confidence 8899999999953 35999999999999999999999 679999999999999999999999999998776555
Q ss_pred ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc--ccc----cHHH--
Q 006903 502 QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV--EVF----DEVL-- 572 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~----d~~~-- 572 (626)
.....++..|++||.... ..++.++||||+||++|||++|+.||........ ...+....... +.. ....
T Consensus 175 ~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
T d2gfsa1 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLILRLVGTPGAELLKKISSESARN 253 (348)
T ss_dssp GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCChHHhhhccchhhhh
Confidence 555667888999997554 4568999999999999999999999975433222 22211110000 000 0000
Q ss_pred -H----------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 573 -I----------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 573 -~----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
. ...........+.+++.+||+.||++|||++|+++ .+.++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~ 308 (348)
T d2gfsa1 254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308 (348)
T ss_dssp HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred hhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence 0 00000112235788999999999999999999987 455543
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-41 Score=344.16 Aligned_cols=239 Identities=21% Similarity=0.281 Sum_probs=188.1
Q ss_pred ccccccCCCcceEEEEe----CCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccCCC-CCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHVKH-PNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l~H-~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++| |||+++++++.+....+++|
T Consensus 29 ~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~ 108 (322)
T d1vzoa_ 29 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 108 (322)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeee
Confidence 47899999999999984 258999999986532 234678899999999977 89999999999999999999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+.+|+|.+++.. ...++......++.|++.||.|+| +.+||||||||+|||++.++.+||+|||+++....
T Consensus 109 e~~~~~~L~~~i~~---~~~~~e~~~~~~~~Qi~~al~~lH----~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~ 181 (322)
T d1vzoa_ 109 DYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLH----KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA 181 (322)
T ss_dssp CCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred ecccccHHHHHHHh---cccccHHHHHHHHHHHHHHHHHhh----cCCEEeccCCccceeecCCCCEEEeeccchhhhcc
Confidence 99999999999964 235678889999999999999999 67999999999999999999999999999865322
Q ss_pred C----ccccccccccchhhccccC--CCCCcchhHHHHHHHHHHHcCCCCCCCCcc--hhHH-HHHHhhcccccccccHH
Q 006903 501 D----QSFLAQTSSLKINDISNQM--CSTIKADVYGFGVILLELLTGKLVQNNGFN--LATW-VHSVVREEWTVEVFDEV 571 (626)
Q Consensus 501 ~----~~~~~~~~~~~~pe~~~~~--~~~~k~DVwSfGvvl~elltg~~p~~~~~~--~~~~-~~~~~~~~~~~~~~d~~ 571 (626)
. .....+++.|++||..... .++.++|||||||+||||+||+.||..... .... .........
T Consensus 182 ~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~-------- 253 (322)
T d1vzoa_ 182 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP-------- 253 (322)
T ss_dssp GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC--------
T ss_pred cccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCC--------
Confidence 1 2234567788889877543 467899999999999999999999974322 1111 111111110
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
..+......+.+++.+||++||++||| ++|+++
T Consensus 254 ----~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 254 ----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred ----CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 011223446888999999999999994 788876
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-39 Score=340.41 Aligned_cols=247 Identities=17% Similarity=0.220 Sum_probs=182.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||+||+|+. .+|+.||||++....... +.+.+|+.++++++|||||++++++... ...|+||
T Consensus 22 ~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~ 101 (355)
T d2b1pa1 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 101 (355)
T ss_dssp EEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEE
Confidence 37899999999999995 579999999997655433 3588999999999999999999998643 5789999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+.++ +.+.+. ..+++..+..++.|++.||.||| ++||+||||||+|||++.++.+|++|||+++....
T Consensus 102 Ey~~~~-l~~~~~-----~~~~~~~i~~~~~qil~gl~~LH----~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~ 171 (355)
T d2b1pa1 102 ELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_dssp ECCSEE-HHHHHT-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred eccchH-HHHhhh-----cCCCHHHHHHHHHHHHHHHHHhh----hcccccccCCccccccccccceeeechhhhhcccc
Confidence 999765 444443 35899999999999999999999 67999999999999999999999999999765433
Q ss_pred --CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh------------------
Q 006903 501 --DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR------------------ 560 (626)
Q Consensus 501 --~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~------------------ 560 (626)
......++..|++||...+..++.++||||+||++|||++|+.||........ ...+..
T Consensus 172 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~ 250 (355)
T d2b1pa1 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_dssp ---------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHH-HHHHHHhccCCCHHHHHHhhhhHH
Confidence 23445678899999999888899999999999999999999999974432221 111111
Q ss_pred ----ccccc-c-----cccHHHHh--hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 561 ----EEWTV-E-----VFDEVLIA--EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 561 ----~~~~~-~-----~~d~~~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..... . .+...... ..........+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~ 310 (355)
T d2b1pa1 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310 (355)
T ss_dssp HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000 0 00000000 0011234556889999999999999999999986
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.6e-36 Score=316.05 Aligned_cols=256 Identities=15% Similarity=0.184 Sum_probs=189.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-----------CCCccccceEEEe--CCeE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-----------HPNVLPPLAYYCS--KQEK 416 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-----------H~nIv~l~g~~~~--~~~~ 416 (626)
.+.||+|+||+||+|+. .+|+.||||+++......+.+.+|++++++++ |+||+++++++.. ....
T Consensus 18 ~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~ 97 (362)
T d1q8ya_ 18 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 97 (362)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccce
Confidence 47899999999999995 67999999999865544567888998887775 5789999998765 3566
Q ss_pred EEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC------eEEe
Q 006903 417 LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME------PCIS 490 (626)
Q Consensus 417 ~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~------~kl~ 490 (626)
+++|+++..+..............+++..+..++.|++.||+|||+ ..||+||||||+|||++.++. +|++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~---~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~ 174 (362)
T d1q8ya_ 98 HVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPENLIQIKIA 174 (362)
T ss_dssp EEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTTEEEEEEC
T ss_pred eeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh---hcCcccccCChhHeeeeccCcccccceeeEe
Confidence 7777777665544333322345678899999999999999999995 368999999999999986653 8999
Q ss_pred eccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc-----hhHHHHHH---hhc-
Q 006903 491 EYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN-----LATWVHSV---VRE- 561 (626)
Q Consensus 491 DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~-----~~~~~~~~---~~~- 561 (626)
|||.+...........+++.|++||......++.++||||+||+++||++|+.||..... ..+..... ...
T Consensus 175 dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~ 254 (362)
T d1q8ya_ 175 DLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL 254 (362)
T ss_dssp CCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSC
T ss_pred ecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCC
Confidence 999988766656667789999999998888899999999999999999999999863211 00000000 000
Q ss_pred --------ccccc-----------------cccHHHH-hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 562 --------EWTVE-----------------VFDEVLI-AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 562 --------~~~~~-----------------~~d~~~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..... ....... ...........+.+++.+|++.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 255 PSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp CHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000 0000000 111234566789999999999999999999999873
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.97 E-value=7.9e-31 Score=268.36 Aligned_cols=206 Identities=32% Similarity=0.548 Sum_probs=165.0
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCcccEEecCCC--CeEEEEEecCCCceec--cCccccCCCC
Q 006903 23 EVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQ--KSVRKIVLDGFNLSGI--LDTTSVCKTQ 98 (626)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~c~~~w~gv~c~~~~--~~v~~l~L~~~~l~g~--~~~~~~~~l~ 98 (626)
.+.++|++||++||+.+.. + ..+.+|..++|||...|.||+|+... .+|+.|+|++++++|. +| +.++.++
T Consensus 2 ~c~~~e~~aLl~~k~~~~~--~--~~l~sW~~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp-~~l~~L~ 76 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLGN--P--TTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIP-SSLANLP 76 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTC--C--GGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECC-GGGGGCT
T ss_pred CCCHHHHHHHHHHHHHCCC--C--CcCCCCCCCCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCC-hHHhcCc
Confidence 3568999999999999963 2 24788988899997669999998753 4899999999999984 55 4899999
Q ss_pred CccEEEccc-CCCcccCCccccCCCCCcEEEeeccccccc------------------------cChhhhcCCCCCeEEc
Q 006903 99 SLVVLSLEE-NNIAGTVSQEISNCKQLTHLYVGRNKLSGN------------------------LPDSLSKLNNLKRLDI 153 (626)
Q Consensus 99 ~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~------------------------ip~~~~~l~~L~~L~l 153 (626)
+|++|+|++ |+++|.+|.+|+++++|++|+|++|+|.|. +|..+++++.|+.+++
T Consensus 77 ~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l 156 (313)
T d1ogqa_ 77 YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeec
Confidence 999999996 899999999999999999999999988764 4455666667777777
Q ss_pred cCCcCCccCCC-ccC-----------------------------------------------------------------
Q 006903 154 SNNNFSSELPD-LSR----------------------------------------------------------------- 167 (626)
Q Consensus 154 s~N~l~g~~p~-~~~----------------------------------------------------------------- 167 (626)
++|.++|.+|. +..
T Consensus 157 ~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~ 236 (313)
T d1ogqa_ 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236 (313)
T ss_dssp CSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 77777666652 111
Q ss_pred ------cCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCC--CCCCcccCCCCCCCCCCCCCCCCC
Q 006903 168 ------ISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGV--NGRLGADSFSGNPGLCGKPLPNAC 234 (626)
Q Consensus 168 ------~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~--~~~~~~~~~~gn~~lcg~~~~~~c 234 (626)
+++|+.|++++|+++|.+|.. .+++|+.|++++|+|+|.||.. +.++....+.||+.+||.|+| +|
T Consensus 237 ~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~plp-~c 312 (313)
T d1ogqa_ 237 LGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp GGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred ccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccccCCCCC-CC
Confidence 245777888888888888864 5788999999999999999864 345666788999999998875 66
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=7.1e-24 Score=200.15 Aligned_cols=165 Identities=15% Similarity=0.145 Sum_probs=117.2
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC-------------------HHHHHHHHHHhccCCCCCccccceEE
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS-------------------SEDFKNRMQKIDHVKHPNVLPPLAYY 410 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~-------------------~~~~~~ei~~l~~l~H~nIv~l~g~~ 410 (626)
.++.||+|+||.||+|...+|+.||||+++..... ...+.+|...+.++.|.+++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 46889999999999999889999999987532110 12345688889999999998877642
Q ss_pred EeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEe
Q 006903 411 CSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCIS 490 (626)
Q Consensus 411 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~ 490 (626)
..+++|||++++.+.++ +......++.|++.+++||| ..||+||||||+|||++++ .++++
T Consensus 84 ----~~~lvme~~~~~~~~~l----------~~~~~~~i~~ql~~~l~~lH----~~giiHrDiKP~NILv~~~-~~~li 144 (191)
T d1zara2 84 ----GNAVLMELIDAKELYRV----------RVENPDEVLDMILEEVAKFY----HRGIVHGDLSQYNVLVSEE-GIWII 144 (191)
T ss_dssp ----TTEEEEECCCCEEGGGC----------CCSCHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEEETT-EEEEC
T ss_pred ----CCEEEEEeeccccccch----------hhHHHHHHHHHHHHHHHHHh----hCCEEEccCChhheeeeCC-CEEEE
Confidence 23799999988655432 23345678999999999999 5799999999999999975 48999
Q ss_pred eccCccccCCCcccc--ccccccchhhccccCCCCCcchhHHHHHHH
Q 006903 491 EYGLIVTENHDQSFL--AQTSSLKINDISNQMCSTIKADVYGFGVIL 535 (626)
Q Consensus 491 DFGl~~~~~~~~~~~--~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl 535 (626)
|||++....+..... ..... ...+.. ...|+.++|+||..--+
T Consensus 145 DFG~a~~~~~~~~~~~l~rd~~-~~~~~f-~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 145 DFPQSVEVGEEGWREILERDVR-NIITYF-SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CCTTCEETTSTTHHHHHHHHHH-HHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred ECCCcccCCCCCcHHHHHHHHH-HHHHHH-cCCCCCcccHHHHHHHH
Confidence 999987654332110 00000 000111 23457789999976443
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.68 E-value=2.6e-17 Score=154.68 Aligned_cols=109 Identities=19% Similarity=0.281 Sum_probs=64.3
Q ss_pred CCccEEEcccCCCcccCC-ccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEE
Q 006903 98 QSLVVLSLEENNIAGTVS-QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFF 175 (626)
Q Consensus 98 ~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~ 175 (626)
++++.|+|++|+|++.++ ..|.++++|+.|+|++|++.+..+..+..+++|++|+|++|+|++..|. |.++++|++|+
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~ 108 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccc
Confidence 456666666666655442 3445666666666666666655555666666666666666666655554 55666666666
Q ss_pred cCCCcccccCCCC--CCCCccEEEccCCcCCCC
Q 006903 176 AENNQLRGGIPEF--DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 176 l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ 206 (626)
|++|+|++..|.. .+++|+.|++++|.+...
T Consensus 109 L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~ 141 (192)
T d1w8aa_ 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred cCCccccccCHHHhcCCcccccccccccccccc
Confidence 6666666544432 355566666666665544
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.54 E-value=1.4e-14 Score=135.53 Aligned_cols=169 Identities=17% Similarity=0.247 Sum_probs=137.0
Q ss_pred CCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEe
Q 006903 59 CSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYV 129 (626)
Q Consensus 59 c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 129 (626)
|.-.|..|.|+++. ..++.|+|++|.|++.++...+..+++|+.|+|++|++.+..+..+..+++|++|+|
T Consensus 6 C~C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L 85 (192)
T d1w8aa_ 6 CHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp SEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CEEcCCEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeee
Confidence 43358889997542 468899999999998887777889999999999999999999999999999999999
Q ss_pred eccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCC-CCCccEEEccCCcCCCCC
Q 006903 130 GRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFD-FSNLLQFNVSNNNLSGPV 207 (626)
Q Consensus 130 ~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~-~~~L~~l~ls~N~l~g~i 207 (626)
++|+|++..|..|.++++|++|+|++|+|++..|. |..+++|+++++++|.+....+... ...++.+.+..|.++...
T Consensus 86 s~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~~~~l~~~~l~~~~~~c~~ 165 (192)
T d1w8aa_ 86 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGA 165 (192)
T ss_dssp CSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCS
T ss_pred ccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHHhhhhhhhcccCCCeEeCC
Confidence 99999987777899999999999999999998887 8899999999999999986544321 223556677788888777
Q ss_pred CCCCCCCcccCCCCCCCCCC
Q 006903 208 PGVNGRLGADSFSGNPGLCG 227 (626)
Q Consensus 208 p~~~~~~~~~~~~gn~~lcg 227 (626)
|..+....-..+..|.-.|.
T Consensus 166 p~~l~~~~l~~L~~n~l~C~ 185 (192)
T d1w8aa_ 166 PSKVRDVQIKDLPHSEFKCS 185 (192)
T ss_dssp STTTTTSBGGGSCTTTCCCC
T ss_pred ChhhcCCEeeecCHhhCcCC
Confidence 77665444444444544454
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.54 E-value=2.8e-15 Score=151.65 Aligned_cols=117 Identities=32% Similarity=0.536 Sum_probs=108.3
Q ss_pred CCccEEEcccCCCcc--cCCccccCCCCCcEEEeec-cccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcE
Q 006903 98 QSLVVLSLEENNIAG--TVSQEISNCKQLTHLYVGR-NKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLT 173 (626)
Q Consensus 98 ~~L~~L~ls~N~l~g--~~p~~~~~l~~L~~L~l~~-N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~ 173 (626)
.+++.|+|++|+++| .+|++|+++++|++|+|++ |+|+|.||++|++|++|++|||++|+|++.+|. +..+..|+.
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 468999999999998 5899999999999999996 899999999999999999999999999999887 888999999
Q ss_pred EEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCC
Q 006903 174 FFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRL 214 (626)
Q Consensus 174 l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~ 214 (626)
+++++|++.+.+|.. .++.|+.+++++|.++|.+|..++.+
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l 172 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSF 172 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCC
T ss_pred cccccccccccCchhhccCcccceeeccccccccccccccccc
Confidence 999999999999975 58899999999999999999876543
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=5.2e-14 Score=138.75 Aligned_cols=134 Identities=22% Similarity=0.178 Sum_probs=85.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|+|++|.|++.. +..+..+++|+.|+|++|+|+. +| .++.+++|++|+|++|++++ +|..+.++++|+.|+
T Consensus 31 ~~l~~L~Ls~N~i~~l~-~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~ 106 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFS-LATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLD 106 (266)
T ss_dssp TTCCEEECTTSCCSEEE-GGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEE
T ss_pred cCCCEEECcCCcCCCcC-HHHhhccccccccccccccccc-cc-cccccccccccccccccccc-ccccccccccccccc
Confidence 35778888888887643 3467778888888888888873 45 35677888888888888874 466677777777777
Q ss_pred ccCCcCCccCCC-ccC------------------------cCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCC
Q 006903 153 ISNNNFSSELPD-LSR------------------------ISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~------------------------~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g 205 (626)
+++|.+.+..+. +.. +++|+.+++++|++++..|.. .+++|+.|++++|+|+
T Consensus 107 l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~- 185 (266)
T d1p9ag_ 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY- 185 (266)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-
T ss_pred ccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-
Confidence 777776654433 334 445555555555555443331 2455556666666555
Q ss_pred CCCCCC
Q 006903 206 PVPGVN 211 (626)
Q Consensus 206 ~ip~~~ 211 (626)
.||..+
T Consensus 186 ~lp~~~ 191 (266)
T d1p9ag_ 186 TIPKGF 191 (266)
T ss_dssp CCCTTT
T ss_pred ccChhH
Confidence 455443
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=4.8e-13 Score=131.70 Aligned_cols=136 Identities=22% Similarity=0.212 Sum_probs=105.6
Q ss_pred ecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCC
Q 006903 68 CDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNN 147 (626)
Q Consensus 68 c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~ 147 (626)
|... .....++.++++|+. +|+ .+ .++|+.|+|++|+|++..+..|.++++|++|+|++|+|+ .+|. ++.+++
T Consensus 6 ~~~~-~~~~~v~C~~~~L~~-iP~-~l--p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~-~~~l~~ 78 (266)
T d1p9ag_ 6 VSKV-ASHLEVNCDKRNLTA-LPP-DL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQV-DGTLPV 78 (266)
T ss_dssp EECS-TTCCEEECTTSCCSS-CCS-CC--CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEEC-CSCCTT
T ss_pred Eccc-CCCeEEEccCCCCCe-eCc-Cc--CcCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-cccc-cccccc
Confidence 5443 234556889999985 554 33 257999999999999866678999999999999999998 5664 578999
Q ss_pred CCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCC
Q 006903 148 LKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGV 210 (626)
Q Consensus 148 L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~ 210 (626)
|++|||++|++++..+.+..+++|+.|++++|.+.+..+.. .+.++..|++++|.+++..|..
T Consensus 79 L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~ 143 (266)
T d1p9ag_ 79 LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGL 143 (266)
T ss_dssp CCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTT
T ss_pred ccccccccccccccccccccccccccccccccccceeeccccccccccccccccccccceecccc
Confidence 99999999999988777999999999999999887644432 3556666666666666444433
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.43 E-value=2.1e-13 Score=117.74 Aligned_cols=99 Identities=19% Similarity=0.238 Sum_probs=48.3
Q ss_pred EEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCc
Q 006903 78 IVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNN 157 (626)
Q Consensus 78 l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~ 157 (626)
|+|++|+++. ++ .+..+++|++|+|++|.|+ .+|+.++.+++|+.|++++|+|++ +| .+.++++|+.|++++|+
T Consensus 3 L~Ls~n~l~~-l~--~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 3 LHLAHKDLTV-LC--HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EECTTSCCSS-CC--CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSC
T ss_pred EEcCCCCCCC-Cc--ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCCc
Confidence 4555555542 21 2444555555555555554 344445555555555555555542 33 25555555555555555
Q ss_pred CCccCC--CccCcCCCcEEEcCCCccc
Q 006903 158 FSSELP--DLSRISGLLTFFAENNQLR 182 (626)
Q Consensus 158 l~g~~p--~~~~~~~L~~l~l~~N~l~ 182 (626)
++...+ .+..+++|+.+++++|.++
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 543221 2444445555555555544
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=3.7e-13 Score=133.81 Aligned_cols=135 Identities=21% Similarity=0.246 Sum_probs=94.3
Q ss_pred cccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCC
Q 006903 92 TSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISG 170 (626)
Q Consensus 92 ~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~ 170 (626)
..+..+++|+.|+|++|.+.+..+..+..+.+|+.+++++|+|++..+..|..+++|+.|+|++|+|++..|. +..+++
T Consensus 99 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~ 178 (284)
T d1ozna_ 99 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 178 (284)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred hhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccc
Confidence 3456677778888888877766666677777788888888888765556677777788888888888776665 677778
Q ss_pred CcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCC---CcccCCCCCCCCC
Q 006903 171 LLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR---LGADSFSGNPGLC 226 (626)
Q Consensus 171 L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~---~~~~~~~gn~~lc 226 (626)
|+.+++++|++++..|.. .+++|+.|++++|.+++..|..++. +....+.||+--|
T Consensus 179 L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 179 LDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred cchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 888888888887766653 4677778888888887766655433 3333455665444
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.41 E-value=5.6e-13 Score=115.03 Aligned_cols=101 Identities=24% Similarity=0.400 Sum_probs=88.9
Q ss_pred cEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCc
Q 006903 101 VVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQ 180 (626)
Q Consensus 101 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~ 180 (626)
++|+|++|+++ .+| .+.++++|++|+|++|+|+ .+|+.++.+++|+.|++++|.|++ +|.+.++++|+.|++++|+
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNR 76 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSC
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cCccccccccCeEECCCCc
Confidence 58999999998 455 5899999999999999998 689999999999999999999986 5779999999999999999
Q ss_pred ccccCC--C-CCCCCccEEEccCCcCCC
Q 006903 181 LRGGIP--E-FDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 181 l~g~ip--~-~~~~~L~~l~ls~N~l~g 205 (626)
++...+ . ..+++|+.|++++|.++.
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 985322 1 257899999999999974
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=2.9e-13 Score=134.60 Aligned_cols=135 Identities=19% Similarity=0.256 Sum_probs=120.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++.+..+ ..+..+.+|+.+++++|+|++..+..|.++++|+.|+|++|+|++..|..+.++++|+.|+
T Consensus 105 ~~L~~L~l~~n~~~~~~~-~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~ 183 (284)
T d1ozna_ 105 GRLHTLHLDRCGLQELGP-GLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (284)
T ss_dssp TTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ccCCEEecCCcccccccc-cccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhh
Confidence 568999999999976544 3677888999999999999987777889999999999999999988788899999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
+++|++++..|. +..+++|+.|++++|.+++..|.. .+++|+.|++++|.+.+.-+
T Consensus 184 l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (284)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred hhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCcc
Confidence 999999998887 899999999999999999876653 68899999999999987644
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.31 E-value=8.5e-12 Score=124.95 Aligned_cols=154 Identities=18% Similarity=0.235 Sum_probs=108.1
Q ss_pred CCCCCcccEEecCC---------CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEE
Q 006903 58 PCSGKWVGVTCDSR---------QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLY 128 (626)
Q Consensus 58 ~c~~~w~gv~c~~~---------~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 128 (626)
.|.-.|.+|.|.+. ...++.|+|++|+++... +..+..+++|+.|++++|.+....|..|.++++|++|+
T Consensus 7 ~c~c~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~-~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~ 85 (305)
T d1xkua_ 7 RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIK-DGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 85 (305)
T ss_dssp TCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBC-TTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCEecCCEEEecCCCCCccCCCCCCCCCEEECcCCcCCCcC-hhHhhccccccccccccccccccchhhhhCCCccCEec
Confidence 34335899999753 245889999999998644 34678899999999999999987788899999999999
Q ss_pred eeccccccc-----------------------------------------------cChhhhcCCCCCeEEccCCcC---
Q 006903 129 VGRNKLSGN-----------------------------------------------LPDSLSKLNNLKRLDISNNNF--- 158 (626)
Q Consensus 129 l~~N~l~g~-----------------------------------------------ip~~~~~l~~L~~L~ls~N~l--- 158 (626)
|++|+++.. .+..+..+++|+.+++++|++
T Consensus 86 l~~n~l~~l~~~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l 165 (305)
T d1xkua_ 86 LSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI 165 (305)
T ss_dssp CCSSCCSBCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC
T ss_pred ccCCccCcCccchhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcccc
Confidence 998877521 111233344455555554444
Q ss_pred ------------------CccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCC
Q 006903 159 ------------------SSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 159 ------------------~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
++.+|. +..++.++.|++++|.+++..|.. .+++|+.|++++|.|+ .||..+..
T Consensus 166 ~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~ 240 (305)
T d1xkua_ 166 PQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 240 (305)
T ss_dssp CSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred CcccCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-cccccccc
Confidence 333333 555677888888888888765543 4778888888888887 56665543
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.25 E-value=1.2e-11 Score=115.90 Aligned_cols=125 Identities=26% Similarity=0.403 Sum_probs=80.4
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+++.. .++.+++|+.|++++|.+.. +| .+.+++.|+.|++++|.+... +.+..+++|+.|+
T Consensus 62 ~nL~~L~Ls~N~l~~~~---~l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~ 134 (199)
T d2omxa2 62 NNLTQINFSNNQLTDIT---PLKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLE 134 (199)
T ss_dssp TTCCEEECCSSCCCCCG---GGTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEE
T ss_pred CCcCcCccccccccCcc---cccCCccccccccccccccc-cc-ccccccccccccccccccccc--cccchhhhhHHhh
Confidence 35666777777766532 25666777777777776653 33 366677777777777766542 3366677777777
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g 205 (626)
+++|++.. +|.+..+++|+.|++++|++++..|-..+++|+.|++++|+++.
T Consensus 135 l~~n~l~~-~~~l~~~~~L~~L~l~~n~l~~l~~l~~l~~L~~L~ls~N~i~~ 186 (199)
T d2omxa2 135 LSSNTISD-ISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSD 186 (199)
T ss_dssp CCSSCCCC-CGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred hhhhhhcc-cccccccccccccccccccccCCccccCCCCCCEEECCCCCCCC
Confidence 77777654 45566677777777777777654333456777777777777664
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=7.3e-12 Score=113.24 Aligned_cols=120 Identities=16% Similarity=0.240 Sum_probs=89.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|+++.. + .....+++|+.|+|++|.++. ++ .+..+++|++|+|++|+++...+..+..+++|+.|+
T Consensus 18 ~~lr~L~L~~n~I~~i-~-~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 18 VRDRELDLRGYKIPVI-E-NLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp TSCEEEECTTSCCCSC-C-CGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CcCcEEECCCCCCCcc-C-ccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCccccccccccccce
Confidence 3578889999888754 3 234678888999999998884 54 478888899999999998854444567788999999
Q ss_pred ccCCcCCcc--CCCccCcCCCcEEEcCCCcccccCCC------CCCCCccEEE
Q 006903 153 ISNNNFSSE--LPDLSRISGLLTFFAENNQLRGGIPE------FDFSNLLQFN 197 (626)
Q Consensus 153 ls~N~l~g~--~p~~~~~~~L~~l~l~~N~l~g~ip~------~~~~~L~~l~ 197 (626)
|++|+++.. +..+..+++|+.+++++|.++. .|. ..+++|+.||
T Consensus 94 L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~-~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 94 LTNNSLVELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEET
T ss_pred eccccccccccccccccccccchhhcCCCcccc-ccchHHHHHHHCCCcCeeC
Confidence 999988753 3347778888888888888863 343 1367777776
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=5.6e-12 Score=114.00 Aligned_cols=108 Identities=17% Similarity=0.174 Sum_probs=92.0
Q ss_pred ccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCC
Q 006903 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGL 171 (626)
Q Consensus 93 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L 171 (626)
.+.++..|+.|+|++|+|+. +|..+..+++|+.|+|++|+++ .++ .+..+++|++|+|++|+++...+. +..+++|
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCcccccccccc
Confidence 34567789999999999985 6776788999999999999998 564 588999999999999999987776 5679999
Q ss_pred cEEEcCCCcccccCCC----CCCCCccEEEccCCcCC
Q 006903 172 LTFFAENNQLRGGIPE----FDFSNLLQFNVSNNNLS 204 (626)
Q Consensus 172 ~~l~l~~N~l~g~ip~----~~~~~L~~l~ls~N~l~ 204 (626)
+.|++++|+++. +++ ..+++|+.|++++|.++
T Consensus 90 ~~L~L~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 90 TELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ccceeccccccc-cccccccccccccchhhcCCCccc
Confidence 999999999974 232 25889999999999885
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.22 E-value=2.9e-11 Score=113.20 Aligned_cols=125 Identities=20% Similarity=0.383 Sum_probs=106.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+++++++.. ++ .+..+++|++|+|++|++++. ++ ++++++|++|++++|.+. .+| .+.+++.|+.|+
T Consensus 40 ~~l~~L~l~~~~i~~-l~--~l~~l~nL~~L~Ls~N~l~~~-~~-l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~ 112 (199)
T d2omxa2 40 DQVTTLQADRLGIKS-ID--GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLT 112 (199)
T ss_dssp TTCCEEECTTSCCCC-CT--TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEE
T ss_pred cCCCEEECCCCCCCC-cc--ccccCCCcCcCccccccccCc-cc-ccCCcccccccccccccc-ccc-cccccccccccc
Confidence 368889999999874 32 477899999999999999974 43 899999999999999997 454 489999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCC-CCCCCccEEEccCCcCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPE-FDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~-~~~~~L~~l~ls~N~l~g~ 206 (626)
+++|.+.. ++.+..+++|+.+++++|++.. +|. ..+++|+.|++++|++++.
T Consensus 113 l~~~~~~~-~~~~~~l~~L~~L~l~~n~l~~-~~~l~~~~~L~~L~l~~n~l~~l 165 (199)
T d2omxa2 113 LFNNQITD-IDPLKNLTNLNRLELSSNTISD-ISALSGLTSLQQLNFSSNQVTDL 165 (199)
T ss_dssp CCSSCCCC-CGGGTTCTTCSEEECCSSCCCC-CGGGTTCTTCSEEECCSSCCCCC
T ss_pred cccccccc-ccccchhhhhHHhhhhhhhhcc-cccccccccccccccccccccCC
Confidence 99999876 4458889999999999999974 443 4688999999999999864
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.21 E-value=2.8e-11 Score=114.38 Aligned_cols=124 Identities=29% Similarity=0.443 Sum_probs=82.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+++.. .++.+++|+.|++++|++++ +| .+.++++|+.|++++|.+.. + +.+..++.|+.++
T Consensus 68 ~~L~~L~L~~n~i~~l~---~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~ 140 (210)
T d1h6ta2 68 PNVTKLFLNGNKLTDIK---PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (210)
T ss_dssp TTCCEEECCSSCCCCCG---GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCEEeCCCccccCcc---ccccCccccccccccccccc-cc-cccccccccccccccccccc-c-ccccccccccccc
Confidence 35677777777776532 24567777777777777764 44 46677777777777777652 2 3466777777777
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLS 204 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~ 204 (626)
+++|.+++ ++.+..+++|+.+++++|++++..|-..+++|+.|++++|+++
T Consensus 141 ~~~n~l~~-~~~~~~l~~L~~l~l~~n~l~~i~~l~~l~~L~~L~Ls~N~i~ 191 (210)
T d1h6ta2 141 LGNNKITD-ITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHIS 191 (210)
T ss_dssp CCSSCCCC-CGGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred cccccccc-cccccccccccccccccccccccccccCCCCCCEEECCCCCCC
Confidence 77777764 3346667777777777777775433345777777777777775
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.21 E-value=2.9e-11 Score=114.24 Aligned_cols=127 Identities=23% Similarity=0.397 Sum_probs=108.4
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.|+++++.+.... .+..+++|+.|+|++|.+++ ++ .++++++|+.|++++|++++ +| .+..+++|+.|++
T Consensus 47 ~L~~L~l~~~~i~~l~---~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l 119 (210)
T d1h6ta2 47 SIDQIIANNSDIKSVQ---GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (210)
T ss_dssp TCCEEECTTSCCCCCT---TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CccEEECcCCCCCCch---hHhhCCCCCEEeCCCccccC-cc-ccccCccccccccccccccc-cc-ccccccccccccc
Confidence 5788999999987642 46789999999999999997 44 37899999999999999985 65 5899999999999
Q ss_pred cCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCC
Q 006903 154 SNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 154 s~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip 208 (626)
++|.++. ++.+..++.|+.+++++|.+++..+...+++|+.+++++|++++..|
T Consensus 120 ~~~~~~~-~~~l~~l~~l~~l~~~~n~l~~~~~~~~l~~L~~l~l~~n~l~~i~~ 173 (210)
T d1h6ta2 120 EHNGISD-INGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP 173 (210)
T ss_dssp TTSCCCC-CGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG
T ss_pred ccccccc-ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999864 56788899999999999999876555578999999999999986433
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.14 E-value=5.2e-11 Score=122.59 Aligned_cols=127 Identities=23% Similarity=0.360 Sum_probs=101.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|++++|.+++.. .+..+++|+.|++++|.+++.. .+.++..++.++++.|.+++ +..+..+++++.|+
T Consensus 241 ~~L~~L~l~~n~l~~~~---~~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ 313 (384)
T d2omza2 241 TNLTDLDLANNQISNLA---PLSGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLED--ISPISNLKNLTYLT 313 (384)
T ss_dssp TTCSEEECCSSCCCCCG---GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEE
T ss_pred cccchhccccCccCCCC---cccccccCCEeeccCcccCCCC--cccccccccccccccccccc--ccccchhcccCeEE
Confidence 46888999999998754 3678889999999999998643 37778888888888888875 34578888888888
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip 208 (626)
+++|++++. +.+..+++|++|++++|++++ +|.. .+++|+.|++++|++++.+|
T Consensus 314 ls~n~l~~l-~~l~~l~~L~~L~L~~n~l~~-l~~l~~l~~L~~L~l~~N~l~~l~~ 368 (384)
T d2omza2 314 LYFNNISDI-SPVSSLTKLQRLFFANNKVSD-VSSLANLTNINWLSAGHNQISDLTP 368 (384)
T ss_dssp CCSSCCSCC-GGGGGCTTCCEEECCSSCCCC-CGGGGGCTTCCEEECCSSCCCBCGG
T ss_pred CCCCCCCCC-cccccCCCCCEEECCCCCCCC-ChhHcCCCCCCEEECCCCcCCCChh
Confidence 888888874 447788888888888888875 4433 57888888888888887655
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.14 E-value=1.2e-10 Score=116.35 Aligned_cols=108 Identities=29% Similarity=0.345 Sum_probs=62.4
Q ss_pred ccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCC
Q 006903 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGL 171 (626)
Q Consensus 93 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L 171 (626)
.+..+++|+.+++++|+++ .+|..+ +++|+.|++++|..++.+|..+.+++.++.|++++|.+++..|. +..+++|
T Consensus 145 ~~~~l~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L 221 (305)
T d1xkua_ 145 AFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHL 221 (305)
T ss_dssp GGGGCTTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTC
T ss_pred ccccccccCccccccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccc
Confidence 3445556666666666655 244332 45566666666666666666666666666666666666655554 5556666
Q ss_pred cEEEcCCCcccccCCCC--CCCCccEEEccCCcCC
Q 006903 172 LTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 172 ~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~ 204 (626)
++|++++|+++ .+|.. .+++|+.|++++|+++
T Consensus 222 ~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 222 RELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp CEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC
T ss_pred eeeeccccccc-ccccccccccCCCEEECCCCccC
Confidence 66666666665 34432 3556666666666655
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=2.2e-10 Score=102.60 Aligned_cols=90 Identities=19% Similarity=0.190 Sum_probs=67.5
Q ss_pred ccCCCCCccEEEcccCC-CcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCC
Q 006903 93 SVCKTQSLVVLSLEENN-IAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGL 171 (626)
Q Consensus 93 ~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L 171 (626)
.+..+++|+.|+|++|+ ++..-+..|.++++|+.|+|++|+|+..-|..|..+++|++|||++|+|+...+.+....+|
T Consensus 26 ~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~~~l 105 (156)
T d2ifga3 26 HLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSL 105 (156)
T ss_dssp TSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCCC
T ss_pred cccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhccccc
Confidence 45667888888887664 77555567888888999999999988666777888888999999988888655554444457
Q ss_pred cEEEcCCCccc
Q 006903 172 LTFFAENNQLR 182 (626)
Q Consensus 172 ~~l~l~~N~l~ 182 (626)
+.|++++|.+.
T Consensus 106 ~~L~L~~Np~~ 116 (156)
T d2ifga3 106 QELVLSGNPLH 116 (156)
T ss_dssp CEEECCSSCCC
T ss_pred cccccCCCccc
Confidence 77777777664
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=3.5e-10 Score=101.26 Aligned_cols=108 Identities=19% Similarity=0.217 Sum_probs=86.0
Q ss_pred CCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccc-cccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCc
Q 006903 95 CKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK-LSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLL 172 (626)
Q Consensus 95 ~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~ 172 (626)
|.....+.++.+++++. .+|..+..+++|+.|+|++|+ ++..-+..|..+++|+.|+|++|+|+...|. |..+++|+
T Consensus 5 C~c~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~ 83 (156)
T d2ifga3 5 CCPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83 (156)
T ss_dssp SCCSSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC
T ss_pred CCcCCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccc
Confidence 44445556777777776 467788889999999998765 7754456689999999999999999988776 88999999
Q ss_pred EEEcCCCcccccCCCC--CCCCccEEEccCCcCC
Q 006903 173 TFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 173 ~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~ 204 (626)
+|++++|+|+ .+|.. ...+|+.|++++|.|.
T Consensus 84 ~L~Ls~N~l~-~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 84 RLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp EEECCSSCCS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred ceeccCCCCc-ccChhhhccccccccccCCCccc
Confidence 9999999998 55554 3447889999999884
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.02 E-value=3.5e-10 Score=116.21 Aligned_cols=127 Identities=24% Similarity=0.367 Sum_probs=108.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|++++|.++.. +.+..+++|+.|++++|.+++..| +..+++|++|++++|++++.. .+..++.++.++
T Consensus 219 ~~L~~L~l~~n~l~~~---~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~ 291 (384)
T d2omza2 219 TNLDELSLNGNQLKDI---GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS--PLAGLTALTNLE 291 (384)
T ss_dssp TTCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEE
T ss_pred CCCCEEECCCCCCCCc---chhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCC--cccccccccccc
Confidence 5688999999999863 256788999999999999997543 888999999999999998643 378899999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip 208 (626)
++.|.+++ ++.+..+++++.+++++|++++..|-..+++|+.|++++|++++ +|
T Consensus 292 ~~~n~l~~-~~~~~~~~~l~~L~ls~n~l~~l~~l~~l~~L~~L~L~~n~l~~-l~ 345 (384)
T d2omza2 292 LNENQLED-ISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSD-VS 345 (384)
T ss_dssp CCSSCCSC-CGGGGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCC-CG
T ss_pred cccccccc-ccccchhcccCeEECCCCCCCCCcccccCCCCCEEECCCCCCCC-Ch
Confidence 99999987 45688899999999999999986554579999999999999985 44
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.97 E-value=3.1e-12 Score=119.82 Aligned_cols=110 Identities=24% Similarity=0.350 Sum_probs=88.6
Q ss_pred ccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCCc
Q 006903 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLL 172 (626)
Q Consensus 93 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~ 172 (626)
++..+++|+.|+|++|+++ .++ .+..|++|+.|+|++|+++ .+|.....+++|+.|++++|+++. ++.+..+++|+
T Consensus 43 sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~~~~~l~~L~ 118 (198)
T d1m9la_ 43 TLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LSGIEKLVNLR 118 (198)
T ss_dssp HHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HHHHHHHHHSS
T ss_pred HHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-ccccccccccc
Confidence 4677889999999999998 455 5888999999999999997 678777777789999999999886 45578888999
Q ss_pred EEEcCCCccccc--CCC-CCCCCccEEEccCCcCCCC
Q 006903 173 TFFAENNQLRGG--IPE-FDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 173 ~l~l~~N~l~g~--ip~-~~~~~L~~l~ls~N~l~g~ 206 (626)
.|++++|+++.. +.. ..+++|+.|++++|.++..
T Consensus 119 ~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 119 VLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp EEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHH
T ss_pred ccccccchhccccccccccCCCccceeecCCCccccC
Confidence 999999988742 122 2588899999999987643
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=98.97 E-value=1.1e-09 Score=104.36 Aligned_cols=57 Identities=14% Similarity=0.255 Sum_probs=28.7
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS 135 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 135 (626)
+++.|+|++|.+++.. .+..+++|+.+++++|.++. ++ .+..+++|+.+++++|...
T Consensus 64 ~L~~L~ls~n~i~~~~---~l~~l~~l~~l~~~~n~~~~-i~-~l~~l~~L~~l~l~~~~~~ 120 (227)
T d1h6ua2 64 NLIGLELKDNQITDLA---PLKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQIT 120 (227)
T ss_dssp TCCEEECCSSCCCCCG---GGTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCC
T ss_pred CCcEeecCCceeeccc---cccccccccccccccccccc-cc-ccccccccccccccccccc
Confidence 4555556555555432 14455555555555555542 22 3445555555555555443
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=98.91 E-value=1.8e-09 Score=102.85 Aligned_cols=125 Identities=26% Similarity=0.408 Sum_probs=97.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.++++++.++. ++ .+..+++|+.+++++|...+.. .+...+.+..++++.+.+.... .+..+++|+.|+
T Consensus 85 ~~l~~l~~~~n~~~~-i~--~l~~l~~L~~l~l~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~ 157 (227)
T d1h6ua2 85 TKITELELSGNPLKN-VS--AIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLS 157 (227)
T ss_dssp CSCCEEECCSCCCSC-CG--GGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEE
T ss_pred ccccccccccccccc-cc--cccccccccccccccccccccc--hhccccchhhhhchhhhhchhh--hhcccccccccc
Confidence 567888999888764 32 5778999999999999887643 3667788888888888887543 477888899999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCC-CCCCCccEEEccCCcCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPE-FDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~-~~~~~L~~l~ls~N~l~g~ 206 (626)
+++|.++.. +.+.++++|+.|++++|++++ +|. ..+++|+.|++++|++++.
T Consensus 158 l~~n~~~~~-~~l~~l~~L~~L~Ls~n~l~~-l~~l~~l~~L~~L~Ls~N~lt~i 210 (227)
T d1h6ua2 158 IGNAQVSDL-TPLANLSKLTTLKADDNKISD-ISPLASLPNLIEVHLKNNQISDV 210 (227)
T ss_dssp CCSSCCCCC-GGGTTCTTCCEEECCSSCCCC-CGGGGGCTTCCEEECTTSCCCBC
T ss_pred ccccccccc-hhhcccccceecccCCCccCC-ChhhcCCCCCCEEECcCCcCCCC
Confidence 998888753 347888889999999998885 443 3578899999999988753
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.85 E-value=4.5e-09 Score=100.74 Aligned_cols=145 Identities=15% Similarity=0.191 Sum_probs=86.1
Q ss_pred CCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCc-cccCCCCCcEE
Q 006903 58 PCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQ-EISNCKQLTHL 127 (626)
Q Consensus 58 ~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~L 127 (626)
+|+.....|.|.... ..++.|+|++|.++. +|...+..+++|++|+|++|.+...+|. .|.+++.++.|
T Consensus 5 ~C~C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~-l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l 83 (242)
T d1xwdc1 5 ICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV-IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEI 83 (242)
T ss_dssp SEEECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCCE-ECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEE
T ss_pred cCCCcCCEEEEeCCCCCCcCCCCCCCCCEEECcCCcCCc-cChhHhhccchhhhhhhccccccceeeccccccccccccc
Confidence 353345667775321 246677777777764 3333566677777777777777665543 45667777777
Q ss_pred Eee-ccccccccChhhhcCCCCCeEEccCCcCCccCCC--ccCcCCCcEEEcCCCcccccCCCCC---C-CCccEEEccC
Q 006903 128 YVG-RNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEFD---F-SNLLQFNVSN 200 (626)
Q Consensus 128 ~l~-~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~--~~~~~~L~~l~l~~N~l~g~ip~~~---~-~~L~~l~ls~ 200 (626)
++. .|++....|..|.++++|+.|++++|.++...+. +..+..+..+...++++.. ++... + ..+..|++++
T Consensus 84 ~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~-i~~~~~~~~~~~l~~L~l~~ 162 (242)
T d1xwdc1 84 RIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHT-IERNSFVGLSFESVILWLNK 162 (242)
T ss_dssp EEECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCE-ECTTSSTTSBSSCEEEECCS
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccccccccccccccccccc-ccccccccccccceeeeccc
Confidence 765 3566655566667777777777777777643331 3344445555555555542 22221 2 2566677777
Q ss_pred CcCC
Q 006903 201 NNLS 204 (626)
Q Consensus 201 N~l~ 204 (626)
|+++
T Consensus 163 n~l~ 166 (242)
T d1xwdc1 163 NGIQ 166 (242)
T ss_dssp SCCC
T ss_pred cccc
Confidence 7766
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.79 E-value=5e-11 Score=111.40 Aligned_cols=119 Identities=24% Similarity=0.353 Sum_probs=98.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|+++. ++ .+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|+++. + +.+..+++|+.|+
T Consensus 48 ~~L~~L~Ls~n~I~~-i~--~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~L~~L~ 121 (198)
T d1m9la_ 48 KACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLVNLRVLY 121 (198)
T ss_dssp TTCCEEECSEEEESC-CC--CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHHSSEEE
T ss_pred cccceeECcccCCCC-cc--cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-ccccccccccccc
Confidence 568999999999984 43 4788999999999999998 577666667889999999999984 4 4588999999999
Q ss_pred ccCCcCCccC--CCccCcCCCcEEEcCCCcccccCCCC------------CCCCccEEE
Q 006903 153 ISNNNFSSEL--PDLSRISGLLTFFAENNQLRGGIPEF------------DFSNLLQFN 197 (626)
Q Consensus 153 ls~N~l~g~~--p~~~~~~~L~~l~l~~N~l~g~ip~~------------~~~~L~~l~ 197 (626)
|++|+++... ..+..+++|+.|++++|.+....+.. .+++|+.||
T Consensus 122 L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred cccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 9999998643 35889999999999999998765542 367788876
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=7.1e-08 Score=92.10 Aligned_cols=131 Identities=15% Similarity=0.170 Sum_probs=82.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcc-cCCCcccCCccccCCCCCcEEEeeccccccccCh-hhhcCC----
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLE-ENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPD-SLSKLN---- 146 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls-~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~-~~~~l~---- 146 (626)
.+++.|+|++|.+...+++..+..++.++.|.+. .|++....+..+.++++|+.|++++|++....+. .+..++
T Consensus 53 ~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~ 132 (242)
T d1xwdc1 53 GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 132 (242)
T ss_dssp TTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEE
T ss_pred chhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccccchhhhccccccccccccccccc
Confidence 4688889999888877776667778888888866 4677776677788888888888888888632221 122233
Q ss_pred ---------------------CCCeEEccCCcCCccCCCccCcCCCcEE-EcCCCcccccCCCC---CCCCccEEEccCC
Q 006903 147 ---------------------NLKRLDISNNNFSSELPDLSRISGLLTF-FAENNQLRGGIPEF---DFSNLLQFNVSNN 201 (626)
Q Consensus 147 ---------------------~L~~L~ls~N~l~g~~p~~~~~~~L~~l-~l~~N~l~g~ip~~---~~~~L~~l~ls~N 201 (626)
.++.|++++|+++...+......++..+ ++++|+++ .+|.. .+++|+.|++++|
T Consensus 133 ~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~-~l~~~~f~~l~~L~~L~Ls~N 211 (242)
T d1xwdc1 133 DIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRT 211 (242)
T ss_dssp EEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTTCC-CCCTTTTTTSCCCSEEECTTS
T ss_pred ccccccccccccccccccccccceeeecccccccccccccccchhhhccccccccccc-cccHHHhcCCCCCCEEECCCC
Confidence 3444555555555443333334444443 34455555 34432 3667777777777
Q ss_pred cCC
Q 006903 202 NLS 204 (626)
Q Consensus 202 ~l~ 204 (626)
+++
T Consensus 212 ~l~ 214 (242)
T d1xwdc1 212 RIH 214 (242)
T ss_dssp CCC
T ss_pred cCC
Confidence 776
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.60 E-value=1e-07 Score=95.73 Aligned_cols=114 Identities=28% Similarity=0.309 Sum_probs=87.7
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
+++.|+|++++|+. +|. .+++|+.|+|++|+|+ .+|..+ .+|+.|++++|+++ .++. + .+.|++|||
T Consensus 39 ~l~~LdLs~~~L~~-lp~----~~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~-l--p~~L~~L~L 105 (353)
T d1jl5a_ 39 QAHELELNNLGLSS-LPE----LPPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSD-L--PPLLEYLGV 105 (353)
T ss_dssp TCSEEECTTSCCSC-CCS----CCTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCS-C--CTTCCEEEC
T ss_pred CCCEEEeCCCCCCC-CCC----CCCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhh-h--ccccccccc
Confidence 47789999999984 553 3578999999999999 788664 57899999999997 4553 1 246999999
Q ss_pred cCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcC
Q 006903 154 SNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNL 203 (626)
Q Consensus 154 s~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l 203 (626)
++|.++. +|.++.+++|+.|++++|.++...+. ...+..+++..+..
T Consensus 106 ~~n~l~~-lp~~~~l~~L~~L~l~~~~~~~~~~~--~~~l~~l~~~~~~~ 152 (353)
T d1jl5a_ 106 SNNQLEK-LPELQNSSFLKIIDVDNNSLKKLPDL--PPSLEFIAAGNNQL 152 (353)
T ss_dssp CSSCCSS-CCCCTTCTTCCEEECCSSCCSCCCCC--CTTCCEEECCSSCC
T ss_pred ccccccc-ccchhhhccceeeccccccccccccc--cccccchhhccccc
Confidence 9999985 67788899999999999998755432 34555566555443
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.43 E-value=4.2e-07 Score=91.06 Aligned_cols=99 Identities=30% Similarity=0.364 Sum_probs=80.4
Q ss_pred CCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcC
Q 006903 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAE 177 (626)
Q Consensus 98 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~ 177 (626)
.+|+.|+|++|+++ .+|+. +++|++|+|++|+|+ .+|..+ .+|+.|++++|+++. ++.+. +.|++|+++
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~~-l~~lp--~~L~~L~L~ 106 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLKA-LSDLP--PLLEYLGVS 106 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCSC-CCSCC--TTCCEEECC
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccch-hhhhc--ccccccccc
Confidence 46899999999998 58864 468999999999998 788754 689999999999874 34332 469999999
Q ss_pred CCcccccCCCC-CCCCccEEEccCCcCCCCCC
Q 006903 178 NNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 178 ~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip 208 (626)
+|.++ .+|.. .+++|+.|++++|.+++..+
T Consensus 107 ~n~l~-~lp~~~~l~~L~~L~l~~~~~~~~~~ 137 (353)
T d1jl5a_ 107 NNQLE-KLPELQNSSFLKIIDVDNNSLKKLPD 137 (353)
T ss_dssp SSCCS-SCCCCTTCTTCCEEECCSSCCSCCCC
T ss_pred ccccc-cccchhhhccceeecccccccccccc
Confidence 99998 45654 58899999999999875543
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.20 E-value=3e-07 Score=90.17 Aligned_cols=135 Identities=16% Similarity=0.189 Sum_probs=84.8
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeec-cccccc-cChhhhcCCCCCeE
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGR-NKLSGN-LPDSLSKLNNLKRL 151 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~-N~l~g~-ip~~~~~l~~L~~L 151 (626)
+++.|+|+++.+++......+..+++|++|+|+++.+++..+..+..+++|++|+|++ +.++.. +..-+..+++|++|
T Consensus 47 ~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L 126 (284)
T d2astb2 47 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDEL 126 (284)
T ss_dssp CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEE
T ss_pred CCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcccc
Confidence 5677777777665432222355677777777777777776667777777777777777 455421 22223566777777
Q ss_pred EccCC-cCCcc---------CC--------------------C-ccCcCCCcEEEcCCC-cccccCCCC--CCCCccEEE
Q 006903 152 DISNN-NFSSE---------LP--------------------D-LSRISGLLTFFAENN-QLRGGIPEF--DFSNLLQFN 197 (626)
Q Consensus 152 ~ls~N-~l~g~---------~p--------------------~-~~~~~~L~~l~l~~N-~l~g~ip~~--~~~~L~~l~ 197 (626)
+|+++ +++.. .| . ...+++|+.|++++| .+++..... .+++|+.|+
T Consensus 127 ~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~ 206 (284)
T d2astb2 127 NLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLS 206 (284)
T ss_dssp ECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEE
T ss_pred ccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEE
Confidence 77763 33210 01 1 123578999999986 466554432 578999999
Q ss_pred ccC-CcCCCCCC
Q 006903 198 VSN-NNLSGPVP 208 (626)
Q Consensus 198 ls~-N~l~g~ip 208 (626)
+++ +.+++...
T Consensus 207 L~~C~~i~~~~l 218 (284)
T d2astb2 207 LSRCYDIIPETL 218 (284)
T ss_dssp CTTCTTCCGGGG
T ss_pred CCCCCCCChHHH
Confidence 998 46665443
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.10 E-value=2.4e-07 Score=96.40 Aligned_cols=109 Identities=16% Similarity=0.185 Sum_probs=56.9
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcc----cCCccccCCCCCcEEEeeccccccccChhhh-----c
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAG----TVSQEISNCKQLTHLYVGRNKLSGNLPDSLS-----K 144 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~-----~ 144 (626)
.|+.||++.+++++.--..-+..+++|++|+|++|+++- .++..+..+++|+.|||++|+++..--..+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 466777777777653111123345666677777776652 2334455666666666666666421101111 1
Q ss_pred CCCCCeEEccCCcCCcc----CCC-ccCcCCCcEEEcCCCccc
Q 006903 145 LNNLKRLDISNNNFSSE----LPD-LSRISGLLTFFAENNQLR 182 (626)
Q Consensus 145 l~~L~~L~ls~N~l~g~----~p~-~~~~~~L~~l~l~~N~l~ 182 (626)
..+|+.|+|++|+++.. ++. +..+++|+.|++++|.++
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 23566666666666542 222 444555555555555554
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.08 E-value=2.7e-07 Score=93.03 Aligned_cols=108 Identities=17% Similarity=0.211 Sum_probs=56.3
Q ss_pred CCCccEEEcccCCCccc----CCccccCCCCCcEEEeeccccccc-----cChhhhcCCCCCeEEccCCcCCcc----C-
Q 006903 97 TQSLVVLSLEENNIAGT----VSQEISNCKQLTHLYVGRNKLSGN-----LPDSLSKLNNLKRLDISNNNFSSE----L- 162 (626)
Q Consensus 97 l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~-----ip~~~~~l~~L~~L~ls~N~l~g~----~- 162 (626)
.+.|+.|++++|+++-. +...+..++.|+.|+|++|.++.. +...+..+++|+.|+|++|.|+.. +
T Consensus 157 ~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~ 236 (344)
T d2ca6a1 157 APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 236 (344)
T ss_dssp CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH
T ss_pred Ccccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccccc
Confidence 44566666666665421 222334455666666666666421 223345566666666666665432 1
Q ss_pred CCccCcCCCcEEEcCCCcccccC--------CCCCCCCccEEEccCCcCC
Q 006903 163 PDLSRISGLLTFFAENNQLRGGI--------PEFDFSNLLQFNVSNNNLS 204 (626)
Q Consensus 163 p~~~~~~~L~~l~l~~N~l~g~i--------p~~~~~~L~~l~ls~N~l~ 204 (626)
+.+..+++|+.|++++|.+++.- +......|+.|++++|+++
T Consensus 237 ~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~ 286 (344)
T d2ca6a1 237 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 286 (344)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred ccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCC
Confidence 12445566666666666655321 1112345666666666654
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.94 E-value=3.1e-07 Score=81.98 Aligned_cols=79 Identities=25% Similarity=0.320 Sum_probs=43.3
Q ss_pred cCCCCCcEEEeeccccccc--cChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC-------
Q 006903 119 SNCKQLTHLYVGRNKLSGN--LPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF------- 188 (626)
Q Consensus 119 ~~l~~L~~L~l~~N~l~g~--ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~------- 188 (626)
..+++|++|+|++|+++.. ++..+..+++|+.|||++|.++..-+- .....+|+.+++++|.++......
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i 141 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHH
Confidence 4556666666666666531 234455666666666666666543221 222334566666666666544421
Q ss_pred --CCCCccEEE
Q 006903 189 --DFSNLLQFN 197 (626)
Q Consensus 189 --~~~~L~~l~ 197 (626)
.+++|+.||
T Consensus 142 ~~~~P~L~~LD 152 (162)
T d1koha1 142 RERFPKLLRLD 152 (162)
T ss_dssp HTTSTTCCEET
T ss_pred HHHCCCCCEEC
Confidence 366666664
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.93 E-value=6.5e-07 Score=92.92 Aligned_cols=106 Identities=14% Similarity=0.229 Sum_probs=81.7
Q ss_pred CccEEEcccCCCcccC-CccccCCCCCcEEEeeccccc----cccChhhhcCCCCCeEEccCCcCCcc----CCC-cc-C
Q 006903 99 SLVVLSLEENNIAGTV-SQEISNCKQLTHLYVGRNKLS----GNLPDSLSKLNNLKRLDISNNNFSSE----LPD-LS-R 167 (626)
Q Consensus 99 ~L~~L~ls~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~----g~ip~~~~~l~~L~~L~ls~N~l~g~----~p~-~~-~ 167 (626)
+|+.||++.|++++.- ..-+..+++|+.|+|++|.++ ..|+..+..+++|+.|||++|.++.. +.. +. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 5899999999998732 333567899999999999997 24566678999999999999998631 111 22 2
Q ss_pred cCCCcEEEcCCCccccc----CCC--CCCCCccEEEccCCcCC
Q 006903 168 ISGLLTFFAENNQLRGG----IPE--FDFSNLLQFNVSNNNLS 204 (626)
Q Consensus 168 ~~~L~~l~l~~N~l~g~----ip~--~~~~~L~~l~ls~N~l~ 204 (626)
..+|++|++++|+++.. ++. ..+++|+.|++++|.++
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 35799999999999754 222 24789999999999876
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.85 E-value=2.2e-06 Score=76.34 Aligned_cols=80 Identities=23% Similarity=0.249 Sum_probs=63.4
Q ss_pred CCCCCccEEEcccCCCccc--CCccccCCCCCcEEEeeccccccccCh-hhhcCCCCCeEEccCCcCCccCCC-------
Q 006903 95 CKTQSLVVLSLEENNIAGT--VSQEISNCKQLTHLYVGRNKLSGNLPD-SLSKLNNLKRLDISNNNFSSELPD------- 164 (626)
Q Consensus 95 ~~l~~L~~L~ls~N~l~g~--~p~~~~~l~~L~~L~l~~N~l~g~ip~-~~~~l~~L~~L~ls~N~l~g~~p~------- 164 (626)
..+++|++|+|++|+++.. ++..+..+++|+.|+|++|+++. +++ ...+...|+.|+|++|.++.....
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~-l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~ 140 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS-ERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCC-GGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCcccc-chhhhhhhccccceeecCCCCcCcCcccchhHHHH
Confidence 4578999999999999863 34556789999999999999984 444 444566899999999999887652
Q ss_pred -ccCcCCCcEEE
Q 006903 165 -LSRISGLLTFF 175 (626)
Q Consensus 165 -~~~~~~L~~l~ 175 (626)
+..+++|+.||
T Consensus 141 i~~~~P~L~~LD 152 (162)
T d1koha1 141 IRERFPKLLRLD 152 (162)
T ss_dssp HHTTSTTCCEET
T ss_pred HHHHCCCCCEEC
Confidence 45678888876
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.85 E-value=1.7e-06 Score=84.63 Aligned_cols=128 Identities=16% Similarity=0.189 Sum_probs=87.5
Q ss_pred CeEEEEEecC-CCceec-cCccccCCCCCccEEEcccC-CCccc-CCcccc-CCCCCcEEEeecc--ccccc-cChhhhc
Q 006903 73 KSVRKIVLDG-FNLSGI-LDTTSVCKTQSLVVLSLEEN-NIAGT-VSQEIS-NCKQLTHLYVGRN--KLSGN-LPDSLSK 144 (626)
Q Consensus 73 ~~v~~l~L~~-~~l~g~-~~~~~~~~l~~L~~L~ls~N-~l~g~-~p~~~~-~l~~L~~L~l~~N--~l~g~-ip~~~~~ 144 (626)
.+++.|+|++ ++++.. +. .....+++|+.|+|+++ +++.. ++..+. .+++|+.|++++. .++.. +..-+.+
T Consensus 95 ~~L~~L~Ls~c~~itd~~l~-~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~ 173 (284)
T d2astb2 95 SNLVRLNLSGCSGFSEFALQ-TLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRR 173 (284)
T ss_dssp TTCSEEECTTCBSCCHHHHH-HHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHH
T ss_pred CCCcCccccccccccccccc-hhhHHHHhccccccccccccccccchhhhcccccccchhhhcccccccccccccccccc
Confidence 5788999998 466532 11 12345789999999985 45432 222333 3578999999864 44422 3344567
Q ss_pred CCCCCeEEccCC-cCCccCC-CccCcCCCcEEEcCC-CcccccCCC--CCCCCccEEEccCC
Q 006903 145 LNNLKRLDISNN-NFSSELP-DLSRISGLLTFFAEN-NQLRGGIPE--FDFSNLLQFNVSNN 201 (626)
Q Consensus 145 l~~L~~L~ls~N-~l~g~~p-~~~~~~~L~~l~l~~-N~l~g~ip~--~~~~~L~~l~ls~N 201 (626)
+++|+.|||++| .+++... .+.++++|++|++++ ++++..... ..+++|+.|+++++
T Consensus 174 ~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 174 CPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp CTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 899999999986 4776544 488899999999998 466644322 25789999999876
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.83 E-value=2.5e-05 Score=74.63 Aligned_cols=129 Identities=15% Similarity=0.095 Sum_probs=86.1
Q ss_pred CcceEEEEeCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecCCCChhHhhcCCC
Q 006903 359 HGSLYRVVLDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSE 436 (626)
Q Consensus 359 fG~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~ 436 (626)
.+.||+.... ++.+.+|+..... .....+.+|...++.+. +--+.+++.+...++..++|||++++..+.+.....
T Consensus 27 ~~~v~rv~~~-~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~~- 104 (263)
T d1j7la_ 27 PAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDE- 104 (263)
T ss_dssp SSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTTC-
T ss_pred CCcEEEEEeC-CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccccccc-
Confidence 4679988754 5567788875443 33445778888776653 323456677777788899999999998876654211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHh-----------------------------------------------------
Q 006903 437 NGQSFDWGSRLRVAACVAKALALIHEE----------------------------------------------------- 463 (626)
Q Consensus 437 ~~~~l~~~~~~~i~~~ia~gL~ylH~~----------------------------------------------------- 463 (626)
.....++.++++.++.||+.
T Consensus 105 -------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 177 (263)
T d1j7la_ 105 -------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTE 177 (263)
T ss_dssp -------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHS
T ss_pred -------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhc
Confidence 11233455566666666631
Q ss_pred c--cCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 464 L--REDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 464 ~--~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
. ....++|+|+.|.|||++++...-|.||+.+.
T Consensus 178 ~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 178 KPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 0 01237899999999999987666799998764
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=97.80 E-value=3e-06 Score=85.10 Aligned_cols=132 Identities=18% Similarity=0.263 Sum_probs=90.4
Q ss_pred CeEEEEEecCCCceec----cCccccCCCCCccEEEcccCCCc----ccC---------CccccCCCCCcEEEeeccccc
Q 006903 73 KSVRKIVLDGFNLSGI----LDTTSVCKTQSLVVLSLEENNIA----GTV---------SQEISNCKQLTHLYVGRNKLS 135 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~----~~~~~~~~l~~L~~L~ls~N~l~----g~~---------p~~~~~l~~L~~L~l~~N~l~ 135 (626)
.+++.|+|++|.+... +. ..+...++|+.|+|++|.++ ..+ .......+.|+.|+++.|+++
T Consensus 93 ~~L~~L~L~~n~i~~~~~~~l~-~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~ 171 (344)
T d2ca6a1 93 PKLHTVRLSDNAFGPTAQEPLI-DFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 171 (344)
T ss_dssp TTCCEEECCSCCCCTTTHHHHH-HHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CCcccccccccccccccccchh-hhhcccccchheecccccccccccccccccccccccccccccCcccceeeccccccc
Confidence 4688889998887652 21 13446778999999988763 011 112245678889999998886
Q ss_pred c----ccChhhhcCCCCCeEEccCCcCCcc-----C-CCccCcCCCcEEEcCCCccccc----CCC--CCCCCccEEEcc
Q 006903 136 G----NLPDSLSKLNNLKRLDISNNNFSSE-----L-PDLSRISGLLTFFAENNQLRGG----IPE--FDFSNLLQFNVS 199 (626)
Q Consensus 136 g----~ip~~~~~l~~L~~L~ls~N~l~g~-----~-p~~~~~~~L~~l~l~~N~l~g~----ip~--~~~~~L~~l~ls 199 (626)
- .+...+..++.|+.|+|++|.++.. + ..+...++|+.|++++|.++.. +.. ..+++|+.|+++
T Consensus 172 ~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls 251 (344)
T d2ca6a1 172 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 251 (344)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred ccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhh
Confidence 2 2444567788899999999988742 1 2366778899999999987632 111 146788999999
Q ss_pred CCcCCC
Q 006903 200 NNNLSG 205 (626)
Q Consensus 200 ~N~l~g 205 (626)
+|.+++
T Consensus 252 ~n~i~~ 257 (344)
T d2ca6a1 252 DCLLSA 257 (344)
T ss_dssp TCCCCH
T ss_pred cCccCc
Confidence 998764
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.64 E-value=5e-05 Score=72.13 Aligned_cols=74 Identities=12% Similarity=0.139 Sum_probs=51.8
Q ss_pred ccccCCC-cceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCC--CccccceEEEeCCeEEEEEeecCCCCh
Q 006903 353 LLGRGKH-GSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHP--NVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 353 ~lG~G~f-G~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~--nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+..|.. +.||+...+++..+.+|.-.... ..++..|...++.+... .+.+++++..+++..++||||+++-++
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~ 93 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 93 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence 4455554 57899998888888999865432 33567777777655432 355667777777889999999987654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.28 E-value=0.00057 Score=67.36 Aligned_cols=136 Identities=11% Similarity=0.084 Sum_probs=81.2
Q ss_pred cceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCC-----ccccc--eEEEeCCeEEEEEeecCCCChh---
Q 006903 360 GSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPN-----VLPPL--AYYCSKQEKLLVYEYQPNGSLF--- 429 (626)
Q Consensus 360 G~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~n-----Iv~l~--g~~~~~~~~~lv~Ey~~~g~L~--- 429 (626)
-.||++..++|+.|++|..+....+.+++..|...+..+.... .+..- ..+...+..+.++++++|..+.
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~~ 115 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADN 115 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSSC
T ss_pred ceeEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCCCC
Confidence 4799999999999999998876667788888988877664222 12221 1234566788999999764221
Q ss_pred --H-------------hhcCCC--CCCCCCHHH-------------------HHHHHHHHHHHHHHHHHhcc---CCCce
Q 006903 430 --N-------------LLHGSE--NGQSFDWGS-------------------RLRVAACVAKALALIHEELR---EDGIA 470 (626)
Q Consensus 430 --~-------------~l~~~~--~~~~l~~~~-------------------~~~i~~~ia~gL~ylH~~~~---~~~iv 470 (626)
. ...... ....+++.. +-.+...+.+.+..+..... ..++|
T Consensus 116 ~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~li 195 (325)
T d1zyla1 116 IDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRL 195 (325)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEEC
T ss_pred HHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCceee
Confidence 0 001100 111222211 11122223333444433221 34689
Q ss_pred eccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 471 HGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 471 HrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
|+|+.+.|||++++ ..+.||+-+..
T Consensus 196 HgDlh~~NvL~~~~--~~~IDFdd~~~ 220 (325)
T d1zyla1 196 HGDCHAGNILWRDG--PMFVDLDDARN 220 (325)
T ss_dssp CSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred cCCCCcccEEEeCC--ceEEechhccc
Confidence 99999999999754 56899987654
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.14 E-value=0.00011 Score=65.27 Aligned_cols=84 Identities=15% Similarity=0.294 Sum_probs=40.8
Q ss_pred CCccEEEcccC-CCccc----CCccccCCCCCcEEEeecccccc----ccChhhhcCCCCCeEEccCCcCCccC-C----
Q 006903 98 QSLVVLSLEEN-NIAGT----VSQEISNCKQLTHLYVGRNKLSG----NLPDSLSKLNNLKRLDISNNNFSSEL-P---- 163 (626)
Q Consensus 98 ~~L~~L~ls~N-~l~g~----~p~~~~~l~~L~~L~l~~N~l~g----~ip~~~~~l~~L~~L~ls~N~l~g~~-p---- 163 (626)
++|+.|+|+++ .++.. +-..+...+.|+.|+|++|.++. .+...+...+.|+.|+|++|.++..- .
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 45566666542 33321 11234445556666666666542 12223445566666666666665321 1
Q ss_pred CccCcCCCcEEEcCCCcc
Q 006903 164 DLSRISGLLTFFAENNQL 181 (626)
Q Consensus 164 ~~~~~~~L~~l~l~~N~l 181 (626)
.+...+.|+.|++++|..
T Consensus 95 aL~~n~sL~~L~l~~n~~ 112 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQ 112 (167)
T ss_dssp HTTTTCCCSEEECCCCSS
T ss_pred HHHhCCcCCEEECCCCcC
Confidence 134445566666655543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.08 E-value=0.0011 Score=67.16 Aligned_cols=74 Identities=11% Similarity=0.131 Sum_probs=46.7
Q ss_pred cccccCCCcceEEEEeCC-CcEEEEEEcCCC--------CCCHHHHHHHHHHhccCC-C--CCccccceEEEeCCeEEEE
Q 006903 352 ELLGRGKHGSLYRVVLDD-GLMLAVKRLRDW--------SISSEDFKNRMQKIDHVK-H--PNVLPPLAYYCSKQEKLLV 419 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~-g~~vAvK~l~~~--------~~~~~~~~~ei~~l~~l~-H--~nIv~l~g~~~~~~~~~lv 419 (626)
+.||.|....||+....+ ++.++||.-... ....+....|.+.|+.+. + ..+.+++. .+++..++|
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~d~~~~~lv 109 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY--SDTEMAVTV 109 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE--EETTTTEEE
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEE--EcCCCCEEE
Confidence 568999999999998654 678999964321 123345566777776542 2 23444443 455667899
Q ss_pred EeecCCCC
Q 006903 420 YEYQPNGS 427 (626)
Q Consensus 420 ~Ey~~~g~ 427 (626)
|||+++..
T Consensus 110 mE~L~~~~ 117 (392)
T d2pula1 110 MEDLSHLK 117 (392)
T ss_dssp ECCCTTSE
T ss_pred EeccCCcc
Confidence 99997654
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.67 E-value=0.00028 Score=62.44 Aligned_cols=108 Identities=16% Similarity=0.175 Sum_probs=71.8
Q ss_pred CeEEEEEecCC-Cceec-cC--ccccCCCCCccEEEcccCCCcccCC----ccccCCCCCcEEEeecccccccc----Ch
Q 006903 73 KSVRKIVLDGF-NLSGI-LD--TTSVCKTQSLVVLSLEENNIAGTVS----QEISNCKQLTHLYVGRNKLSGNL----PD 140 (626)
Q Consensus 73 ~~v~~l~L~~~-~l~g~-~~--~~~~~~l~~L~~L~ls~N~l~g~~p----~~~~~l~~L~~L~l~~N~l~g~i----p~ 140 (626)
..++.|+|+++ .++.. +. ...+...++|+.|+|++|.++..-. ..+...+.|+.|+|++|.++..- -.
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 56889999874 45421 10 1235567889999999999874322 33456788999999999997532 23
Q ss_pred hhhcCCCCCeEEccCCcCCccC----C---C-ccCcCCCcEEEcCCCc
Q 006903 141 SLSKLNNLKRLDISNNNFSSEL----P---D-LSRISGLLTFFAENNQ 180 (626)
Q Consensus 141 ~~~~l~~L~~L~ls~N~l~g~~----p---~-~~~~~~L~~l~l~~N~ 180 (626)
.+...++|+.|+|++|.+...- . . +...+.|+.|+++.+.
T Consensus 95 aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 3566788999999999765321 1 1 3334566666665554
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.65 E-value=0.0015 Score=57.28 Aligned_cols=106 Identities=18% Similarity=0.229 Sum_probs=50.3
Q ss_pred CCCccEEEccc-CCCccc----CCccccCCCCCcEEEeeccccccc----cChhhhcCCCCCeEEccCCcCCccC-----
Q 006903 97 TQSLVVLSLEE-NNIAGT----VSQEISNCKQLTHLYVGRNKLSGN----LPDSLSKLNNLKRLDISNNNFSSEL----- 162 (626)
Q Consensus 97 l~~L~~L~ls~-N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~----ip~~~~~l~~L~~L~ls~N~l~g~~----- 162 (626)
.+.|+.|+|++ |.++.. +-..+..++.|+.|+|++|.++.. +-..+...+.|+.|++++|.++...
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~ 95 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 95 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHH
Confidence 34566666654 334321 112234555666666666665432 1122345566666666666664321
Q ss_pred CCccCcCCCcEEEc--CCCccccc----CCC--CCCCCccEEEccCCc
Q 006903 163 PDLSRISGLLTFFA--ENNQLRGG----IPE--FDFSNLLQFNVSNNN 202 (626)
Q Consensus 163 p~~~~~~~L~~l~l--~~N~l~g~----ip~--~~~~~L~~l~ls~N~ 202 (626)
..+...++|+.+++ +.|.+... +.. ...++|+.|+++.|.
T Consensus 96 ~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 96 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 12444555554433 34444321 111 025566666665443
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=94.92 E-value=0.0019 Score=56.56 Aligned_cols=110 Identities=18% Similarity=0.221 Sum_probs=73.8
Q ss_pred CeEEEEEecC-CCceecc-C--ccccCCCCCccEEEcccCCCcccCC----ccccCCCCCcEEEeeccccccc----cCh
Q 006903 73 KSVRKIVLDG-FNLSGIL-D--TTSVCKTQSLVVLSLEENNIAGTVS----QEISNCKQLTHLYVGRNKLSGN----LPD 140 (626)
Q Consensus 73 ~~v~~l~L~~-~~l~g~~-~--~~~~~~l~~L~~L~ls~N~l~g~~p----~~~~~l~~L~~L~l~~N~l~g~----ip~ 140 (626)
..++.|+|++ +.++... . ...+...++|+.|+|++|.++...- ..+...+.|+.|++++|.++.. +-.
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~ 96 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 96 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence 4688888887 4564211 0 1134567889999999998875422 2345678899999999998643 224
Q ss_pred hhhcCCCCCeEEc--cCCcCCcc----C-CCccCcCCCcEEEcCCCccc
Q 006903 141 SLSKLNNLKRLDI--SNNNFSSE----L-PDLSRISGLLTFFAENNQLR 182 (626)
Q Consensus 141 ~~~~l~~L~~L~l--s~N~l~g~----~-p~~~~~~~L~~l~l~~N~l~ 182 (626)
.+...++|+.++| ++|.+... + ..+...++|+.|+++.|...
T Consensus 97 ~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~~ 145 (166)
T d1io0a_ 97 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 145 (166)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCCc
Confidence 5677888987555 56667532 1 12567788999999877654
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.45 E-value=0.045 Score=54.61 Aligned_cols=72 Identities=10% Similarity=0.070 Sum_probs=46.7
Q ss_pred cccccCCCcceEEEEeCC--------CcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCcc-ccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLDD--------GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVL-PPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv-~l~g~~~~~~~~~lv~Ey 422 (626)
+.|+.|-.-.+|++..++ ...|.+++.- .....-+..+|..+++.+.-.+++ ++++++. + .+||||
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~--~--g~I~ef 122 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEY 122 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECC
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-CcchhhHHHHHHHHHHHHHhCCCCCeEEEEcC--C--ceEEEE
Confidence 567788888999988654 3456666654 333445667888888777533443 5555543 2 679999
Q ss_pred cCCCCh
Q 006903 423 QPNGSL 428 (626)
Q Consensus 423 ~~~g~L 428 (626)
+++..+
T Consensus 123 i~g~~l 128 (395)
T d1nw1a_ 123 IPSRPL 128 (395)
T ss_dssp CCEEEC
T ss_pred eccccC
Confidence 986433
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.24 E-value=0.018 Score=55.63 Aligned_cols=143 Identities=13% Similarity=0.079 Sum_probs=72.2
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCC-----CCccccc-e--EEEeCCeEEEEEeec
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKH-----PNVLPPL-A--YYCSKQEKLLVYEYQ 423 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H-----~nIv~l~-g--~~~~~~~~~lv~Ey~ 423 (626)
+.|..|---+.|+....+|+ +++|+.... ...+++..|++.+..+.+ |..+... | +.........++.+.
T Consensus 24 ~~i~~G~~N~ny~v~t~~g~-yVLri~~~~-~~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~~~~~~~~ 101 (316)
T d2ppqa1 24 KGIAEGVENSNFLLHTTKDP-LILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 101 (316)
T ss_dssp EEECC---EEEEEEEESSCC-EEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred ecCCCCcccCeEEEEECCCc-EEEEEcCCC-CCHHHHHHHHHHHHhhhhccccccccceecCCCcceeeecccceeeeec
Confidence 34566766788999877665 889988653 233456666766666532 2222221 1 122244566777777
Q ss_pred CCCChhH--------------hhc----CCCCCC---CCCH-H----------------HHHHHHHHHHHHHHHHHHhcc
Q 006903 424 PNGSLFN--------------LLH----GSENGQ---SFDW-G----------------SRLRVAACVAKALALIHEELR 465 (626)
Q Consensus 424 ~~g~L~~--------------~l~----~~~~~~---~l~~-~----------------~~~~i~~~ia~gL~ylH~~~~ 465 (626)
.+..... .++ ...... ...+ . .....+..+...+.-.+..--
T Consensus 102 ~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 181 (316)
T d2ppqa1 102 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 181 (316)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred ccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhHHHHHHHHHHhhhccCcccc
Confidence 6543211 000 000000 0000 0 011111222222222221111
Q ss_pred CCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 466 ~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
..|+||+|+.+.||+++++...-|.||+.+.
T Consensus 182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 182 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccccccCCcchhhhhcccccceeEecccccc
Confidence 4579999999999999988777899999763
|