Citrus Sinensis ID: 006923
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 625 | 2.2.26 [Sep-21-2011] | |||||||
| Q0GZS3 | 614 | UDP-sugar pyrophospharyla | N/A | no | 0.982 | 1.0 | 0.837 | 0.0 | |
| Q9C5I1 | 614 | UDP-sugar pyrophosphoryla | yes | no | 0.979 | 0.996 | 0.779 | 0.0 | |
| Q5W915 | 600 | UDP-sugar pyrophospharyla | N/A | no | 0.955 | 0.995 | 0.792 | 0.0 | |
| Q09WE7 | 600 | UDP-sugar pyrophosphoryla | yes | no | 0.955 | 0.995 | 0.792 | 0.0 | |
| A2YGP6 | 616 | UDP-sugar pyrophosphoryla | N/A | no | 0.982 | 0.996 | 0.748 | 0.0 | |
| Q5Z8Y4 | 616 | UDP-sugar pyrophosphoryla | yes | no | 0.961 | 0.975 | 0.754 | 0.0 | |
| Q7A0A0 | 395 | Probable uridylyltransfer | yes | no | 0.444 | 0.703 | 0.272 | 4e-19 | |
| Q6G7E3 | 395 | Probable uridylyltransfer | yes | no | 0.444 | 0.703 | 0.272 | 4e-19 | |
| Q7A4A4 | 395 | Probable uridylyltransfer | yes | no | 0.444 | 0.703 | 0.272 | 4e-19 | |
| Q99S95 | 395 | Probable uridylyltransfer | yes | no | 0.444 | 0.703 | 0.272 | 4e-19 |
| >sp|Q0GZS3|USP_CUCME UDP-sugar pyrophospharylase OS=Cucumis melo GN=USP PE=1 SV=1 | Back alignment and function desciption |
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Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/614 (83%), Positives = 570/614 (92%)
Query: 1 MASTVDSAAEQLSKLGIDGAFADSAPNLKKNLHLLSSEQVELAKMLMEMGQSHLFEKWAA 60
MAS++DSAA LS L I+G FA S PNL+KNLHLLS +QVELAK+L+E+GQSHLFE WA
Sbjct: 1 MASSLDSAALTLSNLSINGDFASSLPNLQKNLHLLSPQQVELAKILLELGQSHLFEHWAE 60
Query: 61 PGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTGEVL 120
PGVDDNEK+AFFDQVA+LNSSYPGGL SYIKTAR LLADSK GKNPFDGFTPSVPTGEVL
Sbjct: 61 PGVDDNEKKAFFDQVARLNSSYPGGLASYIKTARGLLADSKEGKNPFDGFTPSVPTGEVL 120
Query: 121 KFGDDTFINYEQAGVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIEC 180
FGDD+F+++E GV+EA+ AAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQ+YIE
Sbjct: 121 TFGDDSFVSFEDRGVREARKAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQSYIEY 180
Query: 181 ILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVAC 240
+LAL+E+S RLA EIPF IMTSDDTH+RT ELLESNSYFGMKP+QVKLLKQEKVAC
Sbjct: 181 VLALREASNRLAGESETEIPFVIMTSDDTHTRTVELLESNSYFGMKPSQVKLLKQEKVAC 240
Query: 241 LDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLF 300
LDDN+ARLA+DP NKYRIQTKPHGHGDVHALLYSSGLLK WH+AGL+WVLFFQDTNGLLF
Sbjct: 241 LDDNEARLAVDPHNKYRIQTKPHGHGDVHALLYSSGLLKNWHNAGLRWVLFFQDTNGLLF 300
Query: 301 KAIPASLGVSATKQYHVNSLAVPRKAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRAT 360
KAIPASLGVSAT++YHVNSLAVPRKAKEAIGGITRLTH DGRSMVINVEYNQLDPLLRAT
Sbjct: 301 KAIPASLGVSATREYHVNSLAVPRKAKEAIGGITRLTHTDGRSMVINVEYNQLDPLLRAT 360
Query: 361 GFPDGDVNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSS 420
GFPDGDVN ETGYSPFPGNINQLILELG Y+EEL KT GAIKEFVNPKYKDA+KTSFKSS
Sbjct: 361 GFPDGDVNNETGYSPFPGNINQLILELGSYIEELSKTQGAIKEFVNPKYKDATKTSFKSS 420
Query: 421 TRLECMMQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAI 480
TRLECMMQDYPKTLPPSA+VGFTVMDTW+AYAPVKNNPEDAAKVPKGNPYHSATSGEMAI
Sbjct: 421 TRLECMMQDYPKTLPPSARVGFTVMDTWVAYAPVKNNPEDAAKVPKGNPYHSATSGEMAI 480
Query: 481 YCANSLILRKAGAQVDDPVQEVFNGQEVEVWPRLTWKPKWGLTFSEIKNKVSGSCSVSQK 540
Y ANSL+LRKAG +V DPV++VFNGQEVEVWPR+TWKPKWGLTFSEIK+K++G+CS+S +
Sbjct: 481 YRANSLVLRKAGVKVADPVEQVFNGQEVEVWPRITWKPKWGLTFSEIKSKINGNCSISPR 540
Query: 541 STMVIKGRNVVLEDLSLNGALIIDSVDDAEVRVGGKVQNKGWTLEPVDHKDTSVPEEIRI 600
ST+VIKG+NV L+DLSL+G LI+++ +DAEV+V G V NKGWTLEPVD+KDTSVPEEIRI
Sbjct: 541 STLVIKGKNVYLKDLSLDGTLIVNADEDAEVKVEGSVHNKGWTLEPVDYKDTSVPEEIRI 600
Query: 601 RGFKINKLEQLERS 614
RGF+INK+EQ ER+
Sbjct: 601 RGFRINKIEQEERN 614
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May function as the terminal enzyme of the myo-inositol oxidation (MIO) pathway. May also play a role in the salvage pathway for synthesis of nucleotide sugars. Can convert galactose-1-phosphate into glucose-1-phosphate by carrying out both the Gal-1-P conversion to UDP-Gal and, following an epimerase step, the subsequent reverse reaction of UDP-Glc to Glc-1-P. Cucumis melo (taxid: 3656) EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 6EC: 4 |
| >sp|Q9C5I1|USP_ARATH UDP-sugar pyrophosphorylase OS=Arabidopsis thaliana GN=USP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5W915|USP_PEA UDP-sugar pyrophospharylase OS=Pisum sativum GN=USP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q09WE7|USP1_SOYBN UDP-sugar pyrophosphorylase 1 OS=Glycine max GN=USP1 PE=1 SV=1 | Back alignment and function description |
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| >sp|A2YGP6|USP_ORYSI UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. indica GN=USP PE=3 SV=2 | Back alignment and function description |
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| >sp|Q5Z8Y4|USP_ORYSJ UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. japonica GN=USP PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7A0A0|URTF_STAAW Probable uridylyltransferase MW2097 OS=Staphylococcus aureus (strain MW2) GN=MW2097 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6G7E3|URTF_STAAS Probable uridylyltransferase SAS2072 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2072 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q7A4A4|URTF_STAAN Probable uridylyltransferase SA1974 OS=Staphylococcus aureus (strain N315) GN=SA1974 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q99S95|URTF_STAAM Probable uridylyltransferase SAV2171 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2171 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 625 | ||||||
| 122172235 | 614 | RecName: Full=UDP-sugar pyrophospharylas | 0.982 | 1.0 | 0.837 | 0.0 | |
| 255558548 | 622 | UDP-n-acteylglucosamine pyrophosphorylas | 0.992 | 0.996 | 0.832 | 0.0 | |
| 449463426 | 611 | PREDICTED: UDP-sugar pyrophospharylase-l | 0.977 | 1.0 | 0.833 | 0.0 | |
| 225459679 | 616 | PREDICTED: UDP-sugar pyrophospharylase i | 0.982 | 0.996 | 0.810 | 0.0 | |
| 359492281 | 644 | PREDICTED: UDP-sugar pyrophospharylase i | 0.982 | 0.953 | 0.774 | 0.0 | |
| 297792595 | 614 | hypothetical protein ARALYDRAFT_495327 [ | 0.979 | 0.996 | 0.777 | 0.0 | |
| 18423407 | 614 | UDP-sugar pyrophosphorylase [Arabidopsis | 0.979 | 0.996 | 0.779 | 0.0 | |
| 84468424 | 603 | hypothetical protein [Trifolium pratense | 0.958 | 0.993 | 0.808 | 0.0 | |
| 84468344 | 596 | hypothetical protein [Trifolium pratense | 0.947 | 0.993 | 0.803 | 0.0 | |
| 75110834 | 600 | RecName: Full=UDP-sugar pyrophospharylas | 0.955 | 0.995 | 0.792 | 0.0 |
| >gi|122172235|sp|Q0GZS3.1|USP_CUCME RecName: Full=UDP-sugar pyrophospharylase; AltName: Full=UDP-galactose/glucose pyrophosphorylase; Short=UGGPase gi|88954061|gb|ABD59006.1| UDP-galactose/glucose pyrophosphorylase [Cucumis melo] | Back alignment and taxonomy information |
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Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/614 (83%), Positives = 570/614 (92%)
Query: 1 MASTVDSAAEQLSKLGIDGAFADSAPNLKKNLHLLSSEQVELAKMLMEMGQSHLFEKWAA 60
MAS++DSAA LS L I+G FA S PNL+KNLHLLS +QVELAK+L+E+GQSHLFE WA
Sbjct: 1 MASSLDSAALTLSNLSINGDFASSLPNLQKNLHLLSPQQVELAKILLELGQSHLFEHWAE 60
Query: 61 PGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTGEVL 120
PGVDDNEK+AFFDQVA+LNSSYPGGL SYIKTAR LLADSK GKNPFDGFTPSVPTGEVL
Sbjct: 61 PGVDDNEKKAFFDQVARLNSSYPGGLASYIKTARGLLADSKEGKNPFDGFTPSVPTGEVL 120
Query: 121 KFGDDTFINYEQAGVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIEC 180
FGDD+F+++E GV+EA+ AAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQ+YIE
Sbjct: 121 TFGDDSFVSFEDRGVREARKAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQSYIEY 180
Query: 181 ILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVAC 240
+LAL+E+S RLA EIPF IMTSDDTH+RT ELLESNSYFGMKP+QVKLLKQEKVAC
Sbjct: 181 VLALREASNRLAGESETEIPFVIMTSDDTHTRTVELLESNSYFGMKPSQVKLLKQEKVAC 240
Query: 241 LDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLF 300
LDDN+ARLA+DP NKYRIQTKPHGHGDVHALLYSSGLLK WH+AGL+WVLFFQDTNGLLF
Sbjct: 241 LDDNEARLAVDPHNKYRIQTKPHGHGDVHALLYSSGLLKNWHNAGLRWVLFFQDTNGLLF 300
Query: 301 KAIPASLGVSATKQYHVNSLAVPRKAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRAT 360
KAIPASLGVSAT++YHVNSLAVPRKAKEAIGGITRLTH DGRSMVINVEYNQLDPLLRAT
Sbjct: 301 KAIPASLGVSATREYHVNSLAVPRKAKEAIGGITRLTHTDGRSMVINVEYNQLDPLLRAT 360
Query: 361 GFPDGDVNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSS 420
GFPDGDVN ETGYSPFPGNINQLILELG Y+EEL KT GAIKEFVNPKYKDA+KTSFKSS
Sbjct: 361 GFPDGDVNNETGYSPFPGNINQLILELGSYIEELSKTQGAIKEFVNPKYKDATKTSFKSS 420
Query: 421 TRLECMMQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAI 480
TRLECMMQDYPKTLPPSA+VGFTVMDTW+AYAPVKNNPEDAAKVPKGNPYHSATSGEMAI
Sbjct: 421 TRLECMMQDYPKTLPPSARVGFTVMDTWVAYAPVKNNPEDAAKVPKGNPYHSATSGEMAI 480
Query: 481 YCANSLILRKAGAQVDDPVQEVFNGQEVEVWPRLTWKPKWGLTFSEIKNKVSGSCSVSQK 540
Y ANSL+LRKAG +V DPV++VFNGQEVEVWPR+TWKPKWGLTFSEIK+K++G+CS+S +
Sbjct: 481 YRANSLVLRKAGVKVADPVEQVFNGQEVEVWPRITWKPKWGLTFSEIKSKINGNCSISPR 540
Query: 541 STMVIKGRNVVLEDLSLNGALIIDSVDDAEVRVGGKVQNKGWTLEPVDHKDTSVPEEIRI 600
ST+VIKG+NV L+DLSL+G LI+++ +DAEV+V G V NKGWTLEPVD+KDTSVPEEIRI
Sbjct: 541 STLVIKGKNVYLKDLSLDGTLIVNADEDAEVKVEGSVHNKGWTLEPVDYKDTSVPEEIRI 600
Query: 601 RGFKINKLEQLERS 614
RGF+INK+EQ ER+
Sbjct: 601 RGFRINKIEQEERN 614
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Source: Cucumis melo Species: Cucumis melo Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255558548|ref|XP_002520299.1| UDP-n-acteylglucosamine pyrophosphorylase, putative [Ricinus communis] gi|223540518|gb|EEF42085.1| UDP-n-acteylglucosamine pyrophosphorylase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449463426|ref|XP_004149435.1| PREDICTED: UDP-sugar pyrophospharylase-like [Cucumis sativus] gi|449499082|ref|XP_004160716.1| PREDICTED: UDP-sugar pyrophospharylase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|225459679|ref|XP_002285885.1| PREDICTED: UDP-sugar pyrophospharylase isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359492281|ref|XP_003634394.1| PREDICTED: UDP-sugar pyrophospharylase isoform 2 [Vitis vinifera] gi|302141755|emb|CBI18958.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297792595|ref|XP_002864182.1| hypothetical protein ARALYDRAFT_495327 [Arabidopsis lyrata subsp. lyrata] gi|297310017|gb|EFH40441.1| hypothetical protein ARALYDRAFT_495327 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|18423407|ref|NP_568775.1| UDP-sugar pyrophosphorylase [Arabidopsis thaliana] gi|75168956|sp|Q9C5I1.1|USP_ARATH RecName: Full=UDP-sugar pyrophosphorylase; Short=AtUSP gi|13430648|gb|AAK25946.1|AF360236_1 unknown protein [Arabidopsis thaliana] gi|14532822|gb|AAK64093.1| unknown protein [Arabidopsis thaliana] gi|84181457|gb|ABC55066.1| nonspecific UDP-sugar pyrophosphorylase [Arabidopsis thaliana] gi|332008851|gb|AED96234.1| UDP-sugar pyrophosphorylase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|84468424|dbj|BAE71295.1| hypothetical protein [Trifolium pratense] | Back alignment and taxonomy information |
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| >gi|84468344|dbj|BAE71255.1| hypothetical protein [Trifolium pratense] | Back alignment and taxonomy information |
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| >gi|75110834|sp|Q5W915.1|USP_PEA RecName: Full=UDP-sugar pyrophospharylase; Short=PsUSP gi|54650280|dbj|BAD66876.1| UDP-sugar pyrophospharylase [Pisum sativum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 625 | ||||||
| TAIR|locus:2149574 | 614 | USP "UDP-sugar pyrophosphoryla | 0.972 | 0.990 | 0.789 | 3e-268 | |
| GENEDB_PFALCIPARUM|PFE0875c | 855 | PFE0875c "hypothetical protein | 0.476 | 0.348 | 0.414 | 1.2e-80 | |
| UNIPROTKB|C0H4E3 | 855 | PFE0875c "Putative uncharacter | 0.476 | 0.348 | 0.414 | 1.2e-80 | |
| FB|FBgn0259749 | 536 | mmy "mummy" [Drosophila melano | 0.572 | 0.667 | 0.246 | 8.6e-18 | |
| CGD|CAL0000289 | 486 | UAP1 [Candida albicans (taxid: | 0.486 | 0.625 | 0.253 | 3e-17 | |
| UNIPROTKB|Q5AGB4 | 486 | UAP1 "Putative uncharacterized | 0.486 | 0.625 | 0.253 | 3e-17 | |
| ASPGD|ASPL0000037237 | 505 | ungA [Emericella nidulans (tax | 0.483 | 0.598 | 0.268 | 3.4e-17 | |
| UNIPROTKB|G4MYL3 | 504 | MGG_15671 "Uncharacterized pro | 0.489 | 0.607 | 0.262 | 4.4e-17 | |
| SGD|S000002261 | 477 | QRI1 "UDP-N-acetylglucosamine | 0.683 | 0.895 | 0.260 | 1.7e-15 | |
| ZFIN|ZDB-GENE-040426-1056 | 505 | uap1l1 "UDP-N-acteylglucosamin | 0.48 | 0.594 | 0.253 | 2.6e-15 |
| TAIR|locus:2149574 USP "UDP-sugar pyrophosphorylase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2580 (913.3 bits), Expect = 3.0e-268, P = 3.0e-268
Identities = 481/609 (78%), Positives = 550/609 (90%)
Query: 17 IDGAFADSAPNLKKNLHLLSSEQVELAKMLMEMGQSHLFEKWAAPGVDDNEKRAFFDQVA 76
+D F S P L NL LLS +Q+ELAK+L+E GQSHLF++W GVDD EK AFFDQ+A
Sbjct: 5 VDSNFFSSVPALHSNLGLLSPDQIELAKILLENGQSHLFQQWPELGVDDKEKLAFFDQIA 64
Query: 77 KLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTGEVLKFGDDTFINYEQAGVK 136
+LNSSYPGGL +YIKTA+ELLADSK GKNP+DGF+PSVP+GE L FG D FI E+ GV
Sbjct: 65 RLNSSYPGGLAAYIKTAKELLADSKVGKNPYDGFSPSVPSGENLTFGTDNFIEMEKRGVV 124
Query: 137 EAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRL-AEGK 195
EA+NAAFVLVAGGLGERLGYNGIKVALP ETTTGTCFLQ+YIE ILALQE+S ++ ++G
Sbjct: 125 EARNAAFVLVAGGLGERLGYNGIKVALPRETTTGTCFLQHYIESILALQEASNKIDSDGS 184
Query: 196 CQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNK 255
++IPF IMTSDDTHSRT +LLE NSYFGMKPTQV LLKQEKVACLDDNDARLA+DP NK
Sbjct: 185 ERDIPFIIMTSDDTHSRTLDLLELNSYFGMKPTQVHLLKQEKVACLDDNDARLALDPHNK 244
Query: 256 YRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQY 315
Y IQTKPHGHGDVH+LLYSSGLL +W +AGLKWVLFFQDTNGLLF AIPASLGVSATKQY
Sbjct: 245 YSIQTKPHGHGDVHSLLYSSGLLHKWLEAGLKWVLFFQDTNGLLFNAIPASLGVSATKQY 304
Query: 316 HVNSLAVPRKAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCETGYSP 375
HVNSLAVPRKAKEAIGGI++LTH DGRSMVINVEYNQLDPLLRA+GFPDGDVNCETG+SP
Sbjct: 305 HVNSLAVPRKAKEAIGGISKLTHVDGRSMVINVEYNQLDPLLRASGFPDGDVNCETGFSP 364
Query: 376 FPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLP 435
FPGNINQLILELGPY +EL+KTGGAIKEFVNPKYKD++KT+FKSSTRLECMMQDYPKTLP
Sbjct: 365 FPGNINQLILELGPYKDELQKTGGAIKEFVNPKYKDSTKTAFKSSTRLECMMQDYPKTLP 424
Query: 436 PSAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYCANSLILRKAGAQV 495
P+A+VGFTVMD WLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIY ANSLIL+KAG +V
Sbjct: 425 PTARVGFTVMDIWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLILQKAGVKV 484
Query: 496 DDPVQEVFNGQEVEVWPRLTWKPKWGLTFSEIKNKVSGSCSVSQKSTMVIKGRNVVLEDL 555
++PV++V NGQEVEVW R+TWKPKWG+ FS+IK KVSG+C VSQ+STM IKGRNV ++DL
Sbjct: 485 EEPVKQVLNGQEVEVWSRITWKPKWGMIFSDIKKKVSGNCEVSQRSTMAIKGRNVFIKDL 544
Query: 556 SLNGALIIDSVDDAEVRVGGKVQNKGWTLEPVDHKDTSVPEEIRIRGFKINKLEQLERSY 615
SL+GALI+DS+DDAEV++GG ++N GWT+E VD+KDTSVPEEIRIRGF+ NK+EQLE+
Sbjct: 545 SLDGALIVDSIDDAEVKLGGLIKNNGWTMESVDYKDTSVPEEIRIRGFRFNKVEQLEKKL 604
Query: 616 SEPGKFSLK 624
++PGKFS++
Sbjct: 605 TQPGKFSVE 613
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| GENEDB_PFALCIPARUM|PFE0875c PFE0875c "hypothetical protein, conserved" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
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| UNIPROTKB|C0H4E3 PFE0875c "Putative uncharacterized protein" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
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| FB|FBgn0259749 mmy "mummy" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| CGD|CAL0000289 UAP1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5AGB4 UAP1 "Putative uncharacterized protein UAP1" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000037237 ungA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G4MYL3 MGG_15671 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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| SGD|S000002261 QRI1 "UDP-N-acetylglucosamine pyrophosphorylase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-1056 uap1l1 "UDP-N-acteylglucosamine pyrophosphorylase 1, like 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q09WE7 | USP1_SOYBN | 2, ., 7, ., 7, ., 6, 4 | 0.7920 | 0.9552 | 0.995 | yes | no |
| Q5Z8Y4 | USP_ORYSJ | 2, ., 7, ., 7, ., 6, 4 | 0.7545 | 0.9616 | 0.9756 | yes | no |
| A2YGP6 | USP_ORYSI | 2, ., 7, ., 7, ., 6, 4 | 0.7487 | 0.9824 | 0.9967 | N/A | no |
| Q9C5I1 | USP_ARATH | 2, ., 7, ., 7, ., 6, 4 | 0.7792 | 0.9792 | 0.9967 | yes | no |
| Q5W915 | USP_PEA | 2, ., 7, ., 7, ., 6, 4 | 0.7920 | 0.9552 | 0.995 | N/A | no |
| Q0GZS3 | USP_CUCME | 2, ., 7, ., 7, ., 6, 4 | 0.8371 | 0.9824 | 1.0 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.7.64 | 0.994 |
| 3rd Layer | 2.7.7 | 0.998 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 625 | |||
| PLN02830 | 615 | PLN02830, PLN02830, UDP-sugar pyrophosphorylase | 0.0 | |
| cd06424 | 315 | cd06424, UGGPase, UGGPase catalyzes the synthesis | 0.0 | |
| cd04180 | 266 | cd04180, UGPase_euk_like, Eukaryotic UGPase-like i | 1e-99 | |
| cd04193 | 323 | cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphoryl | 8e-34 | |
| PTZ00339 | 482 | PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyroph | 3e-26 | |
| PLN02435 | 493 | PLN02435, PLN02435, probable UDP-N-acetylglucosami | 1e-20 | |
| COG4284 | 472 | COG4284, COG4284, UDP-glucose pyrophosphorylase [C | 6e-19 | |
| pfam01704 | 417 | pfam01704, UDPGP, UTP--glucose-1-phosphate uridyly | 3e-07 |
| >gnl|CDD|215444 PLN02830, PLN02830, UDP-sugar pyrophosphorylase | Back alignment and domain information |
|---|
Score = 1105 bits (2859), Expect = 0.0
Identities = 427/616 (69%), Positives = 505/616 (81%), Gaps = 5/616 (0%)
Query: 13 SKLGIDGAFADSAPNLKKNLHLLSSEQVELAKMLMEMGQSHLFEKWAAPGVDDNEKRAFF 72
S L + S P+L NL LLS +Q L + L+E+GQSHLFE W PGVDD++KR
Sbjct: 1 SALSVASKSDSSVPSLHSNLALLSPDQRALVRRLLELGQSHLFEHWPEPGVDDDDKRRLL 60
Query: 73 DQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTGEVLKFGDDTFINYEQ 132
+QVA+L+ SYPGGL +Y+ A+ELLADSK G NPF+G+TPSVP GEVL++G + F+ E+
Sbjct: 61 EQVARLDESYPGGLAAYVSNAKELLADSKEGVNPFEGWTPSVPEGEVLEYGSEEFVELEE 120
Query: 133 AGVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLA 192
AG++EA NAAFVLVAGGLGERLGY+GIKVALP ET TGTC+LQ YIE ILALQE + +
Sbjct: 121 AGLREAGNAAFVLVAGGLGERLGYSGIKVALPTETATGTCYLQLYIESILALQERAKKRK 180
Query: 193 EGKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDP 252
K ++IP IMTSDDTH+RT +LLE N YFGM P QV LLKQEKVACL DNDARLA+DP
Sbjct: 181 AKKGRKIPLVIMTSDDTHARTLKLLERNDYFGMDPDQVTLLKQEKVACLMDNDARLALDP 240
Query: 253 KNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSAT 312
+ Y+IQTKPHGHGDVHALLYSSGLL +W AG KWV+FFQDTNGL+FKAIPA+LGVSAT
Sbjct: 241 NDPYKIQTKPHGHGDVHALLYSSGLLDKWLSAGKKWVVFFQDTNGLVFKAIPAALGVSAT 300
Query: 313 KQYHVNSLAVPRKAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCETG 372
K + +NSLAVPRKAKEAIG I +LTH DGR MVINVEYNQLDPLLRATG PDGDVN ETG
Sbjct: 301 KGFDMNSLAVPRKAKEAIGAIAKLTHKDGREMVINVEYNQLDPLLRATGHPDGDVNDETG 360
Query: 373 YSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPK 432
YSPFPGNINQLIL+LGPY++EL KTGG I+EFVNPKYKDA+KT+FKS TRLECMMQDYPK
Sbjct: 361 YSPFPGNINQLILKLGPYVKELAKTGGVIEEFVNPKYKDATKTAFKSPTRLECMMQDYPK 420
Query: 433 TLPPSAKVGFTVMDTWLAYAPVKNNPEDA-AKVPKGNPYHSATSGEMAIYCANSLILRKA 491
TLPPSAKVGFTV D WLAY+PVKN+P D AKVP+GNP HSATSGEMAIY AN LILRKA
Sbjct: 421 TLPPSAKVGFTVFDNWLAYSPVKNSPADGAAKVPEGNPTHSATSGEMAIYGANCLILRKA 480
Query: 492 GAQVDDPVQE-VFNGQEVEVWPRLTWKPKWGLTFSEIKNKV-SGSCSVSQKSTMVIKGRN 549
GA V++PV++ VFNG EVEV PR+ KP + LTFSE+K KV GS +SQ+ST+V++G +
Sbjct: 481 GADVEEPVEDVVFNGIEVEVGPRIVLKPAFALTFSELKKKVAPGSVKISQRSTLVLEGAD 540
Query: 550 VVLEDLSLNGALIIDSVDDAEVRVGG-KVQNKGWTLEPVDHKDTSVPEEIRIRGFKINKL 608
+V+E+LSL+GAL++ +V AEV VGG +V+NKGWT EPVD K TS PEEIRIRGF I K+
Sbjct: 541 IVIENLSLDGALVVRAVPGAEVTVGGLRVKNKGWTWEPVD-KGTSAPEEIRIRGFVIKKV 599
Query: 609 EQLERSYSEPGKFSLK 624
E E + +PGK+++
Sbjct: 600 ETAELVFDKPGKYTVP 615
|
Length = 615 |
| >gnl|CDD|133046 cd06424, UGGPase, UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose | Back alignment and domain information |
|---|
| >gnl|CDD|133023 cd04180, UGPase_euk_like, Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes | Back alignment and domain information |
|---|
| >gnl|CDD|133036 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc | Back alignment and domain information |
|---|
| >gnl|CDD|240368 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215238 PLN02435, PLN02435, probable UDP-N-acetylglucosamine pyrophosphorylase | Back alignment and domain information |
|---|
| >gnl|CDD|226734 COG4284, COG4284, UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|201928 pfam01704, UDPGP, UTP--glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 625 | |||
| PLN02830 | 615 | UDP-sugar pyrophosphorylase | 100.0 | |
| PLN02435 | 493 | probable UDP-N-acetylglucosamine pyrophosphorylase | 100.0 | |
| PLN02474 | 469 | UTP--glucose-1-phosphate uridylyltransferase | 100.0 | |
| cd06424 | 315 | UGGPase UGGPase catalyzes the synthesis of UDP-Glu | 100.0 | |
| PTZ00339 | 482 | UDP-N-acetylglucosamine pyrophosphorylase; Provisi | 100.0 | |
| KOG2638 | 498 | consensus UDP-glucose pyrophosphorylase [Carbohydr | 100.0 | |
| PF01704 | 420 | UDPGP: UTP--glucose-1-phosphate uridylyltransferas | 100.0 | |
| KOG2388 | 477 | consensus UDP-N-acetylglucosamine pyrophosphorylas | 100.0 | |
| cd04193 | 323 | UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catala | 100.0 | |
| cd00897 | 300 | UGPase_euk Eukaryotic UGPase catalyses the synthes | 100.0 | |
| COG4284 | 472 | UDP-glucose pyrophosphorylase [Carbohydrate transp | 100.0 | |
| cd04180 | 266 | UGPase_euk_like Eukaryotic UGPase-like includes UD | 100.0 | |
| COG1207 | 460 | GlmU N-acetylglucosamine-1-phosphate uridyltransfe | 98.39 | |
| PRK14356 | 456 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.2 | |
| PRK14359 | 430 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.15 | |
| PRK15480 | 292 | glucose-1-phosphate thymidylyltransferase RfbA; Pr | 97.84 | |
| PRK14355 | 459 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.72 | |
| TIGR01173 | 451 | glmU UDP-N-acetylglucosamine diphosphorylase/gluco | 97.72 | |
| PRK05293 | 380 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.71 | |
| PRK00844 | 407 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.69 | |
| TIGR01207 | 286 | rmlA glucose-1-phosphate thymidylyltransferase, sh | 97.69 | |
| cd04197 | 217 | eIF-2B_epsilon_N The N-terminal domain of epsilon | 97.68 | |
| cd02509 | 274 | GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf | 97.58 | |
| cd06425 | 233 | M1P_guanylylT_B_like_N N-terminal domain of the M1 | 97.5 | |
| cd02540 | 229 | GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | 97.5 | |
| PF00483 | 248 | NTP_transferase: Nucleotidyl transferase This Pros | 97.48 | |
| cd04181 | 217 | NTP_transferase NTP_transferases catalyze the tran | 97.46 | |
| TIGR02092 | 369 | glgD glucose-1-phosphate adenylyltransferase, GlgD | 97.44 | |
| PRK14352 | 482 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.43 | |
| PRK14353 | 446 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.4 | |
| PRK00725 | 425 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.38 | |
| cd06915 | 223 | NTP_transferase_WcbM_like WcbM_like is a subfamily | 97.37 | |
| cd04189 | 236 | G1P_TT_long G1P_TT_long represents the long form o | 97.36 | |
| cd02538 | 240 | G1P_TT_short G1P_TT_short is the short form of glu | 97.36 | |
| cd06422 | 221 | NTP_transferase_like_1 NTP_transferase_like_1 is a | 97.35 | |
| cd06426 | 220 | NTP_transferase_like_2 NTP_trnasferase_like_2 is a | 97.32 | |
| PRK14360 | 450 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.32 | |
| PRK05450 | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 97.32 | |
| PRK02862 | 429 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.29 | |
| PLN02241 | 436 | glucose-1-phosphate adenylyltransferase | 97.26 | |
| PRK14358 | 481 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.22 | |
| PRK14357 | 448 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.21 | |
| cd02508 | 200 | ADP_Glucose_PP ADP-glucose pyrophosphorylase is in | 97.21 | |
| cd02524 | 253 | G1P_cytidylyltransferase G1P_cytidylyltransferase | 97.17 | |
| cd06428 | 257 | M1P_guanylylT_A_like_N N-terminal domain of M1P_gu | 97.13 | |
| PF01128 | 221 | IspD: 2-C-methyl-D-erythritol 4-phosphate cytidyly | 97.13 | |
| TIGR02623 | 254 | G1P_cyt_trans glucose-1-phosphate cytidylyltransfe | 97.06 | |
| COG1213 | 239 | Predicted sugar nucleotidyltransferases [Cell enve | 97.03 | |
| TIGR01208 | 353 | rmlA_long glucose-1-phosphate thymidylylransferase | 96.93 | |
| cd04198 | 214 | eIF-2B_gamma_N The N-terminal domain of gamma subu | 96.89 | |
| PRK13385 | 230 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 96.85 | |
| TIGR00454 | 183 | conserved hypothetical protein TIGR00454. At this | 96.84 | |
| KOG1322 | 371 | consensus GDP-mannose pyrophosphorylase/mannose-1- | 96.83 | |
| TIGR01479 | 468 | GMP_PMI mannose-1-phosphate guanylyltransferase/ma | 96.79 | |
| TIGR02091 | 361 | glgC glucose-1-phosphate adenylyltransferase. This | 96.76 | |
| PLN02728 | 252 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 96.74 | |
| cd02523 | 229 | PC_cytidylyltransferase Phosphocholine cytidylyltr | 96.72 | |
| TIGR01105 | 297 | galF UTP-glucose-1-phosphate uridylyltransferase, | 96.69 | |
| PRK14354 | 458 | glmU bifunctional N-acetylglucosamine-1-phosphate | 96.63 | |
| cd04182 | 186 | GT_2_like_f GT_2_like_f is a subfamily of the glyc | 96.62 | |
| cd02517 | 239 | CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th | 96.59 | |
| cd02513 | 223 | CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N- | 96.56 | |
| PF12804 | 160 | NTP_transf_3: MobA-like NTP transferase domain; PD | 96.55 | |
| PLN02917 | 293 | CMP-KDO synthetase | 96.43 | |
| COG1208 | 358 | GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas | 96.4 | |
| PRK13368 | 238 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 96.35 | |
| TIGR03310 | 188 | matur_ygfJ molybdenum hydroxylase accessory protei | 96.32 | |
| COG2266 | 177 | GTP:adenosylcobinamide-phosphate guanylyltransfera | 96.32 | |
| PF14134 | 513 | DUF4301: Domain of unknown function (DUF4301) | 96.31 | |
| PRK00560 | 196 | molybdopterin-guanine dinucleotide biosynthesis pr | 96.23 | |
| PRK10122 | 297 | GalU regulator GalF; Provisional | 96.15 | |
| COG1209 | 286 | RfbA dTDP-glucose pyrophosphorylase [Cell envelope | 96.11 | |
| COG0746 | 192 | MobA Molybdopterin-guanine dinucleotide biosynthes | 96.11 | |
| TIGR02665 | 186 | molyb_mobA molybdopterin-guanine dinucleotide bios | 95.93 | |
| cd02503 | 181 | MobA MobA catalyzes the formation of molybdopterin | 95.9 | |
| TIGR00453 | 217 | ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl | 95.78 | |
| PRK02726 | 200 | molybdopterin-guanine dinucleotide biosynthesis pr | 95.74 | |
| COG1211 | 230 | IspD 4-diphosphocytidyl-2-methyl-D-erithritol synt | 95.74 | |
| cd02516 | 218 | CDP-ME_synthetase CDP-ME synthetase is involved in | 95.72 | |
| TIGR03202 | 190 | pucB xanthine dehydrogenase accessory protein pucB | 95.69 | |
| PRK00155 | 227 | ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl | 95.67 | |
| PRK00317 | 193 | mobA molybdopterin-guanine dinucleotide biosynthes | 95.65 | |
| TIGR01099 | 260 | galU UTP-glucose-1-phosphate uridylyltransferase. | 95.4 | |
| PRK14489 | 366 | putative bifunctional molybdopterin-guanine dinucl | 95.26 | |
| PRK14490 | 369 | putative bifunctional molybdopterin-guanine dinucl | 95.24 | |
| cd02541 | 267 | UGPase_prokaryotic Prokaryotic UGPase catalyses th | 95.22 | |
| COG0448 | 393 | GlgC ADP-glucose pyrophosphorylase [Carbohydrate t | 95.1 | |
| PRK09451 | 456 | glmU bifunctional N-acetylglucosamine-1-phosphate | 95.07 | |
| PRK14500 | 346 | putative bifunctional molybdopterin-guanine dinucl | 95.01 | |
| PRK09382 | 378 | ispDF bifunctional 2-C-methyl-D-erythritol 4-phosp | 94.95 | |
| COG0836 | 333 | {ManC} Mannose-1-phosphate guanylyltransferase [Ce | 94.83 | |
| KOG1460 | 407 | consensus GDP-mannose pyrophosphorylase [Carbohydr | 94.49 | |
| cd04183 | 231 | GT2_BcE_like GT2_BcbE_like is likely involved in t | 94.47 | |
| PRK15460 | 478 | cpsB mannose-1-phosphate guanyltransferase; Provis | 94.16 | |
| PRK13389 | 302 | UTP--glucose-1-phosphate uridylyltransferase subun | 94.07 | |
| cd02507 | 216 | eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma | 93.91 | |
| TIGR00466 | 238 | kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe | 93.7 | |
| cd02518 | 233 | GT2_SpsF SpsF is a glycosyltrnasferase implicated | 91.37 | |
| COG4750 | 231 | LicC CTP:phosphocholine cytidylyltransferase invol | 88.02 | |
| COG2068 | 199 | Uncharacterized MobA-related protein [General func | 85.48 | |
| COG1210 | 291 | GalU UDP-glucose pyrophosphorylase [Cell envelope | 84.71 |
| >PLN02830 UDP-sugar pyrophosphorylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-146 Score=1222.51 Aligned_cols=610 Identities=70% Similarity=1.139 Sum_probs=575.6
Q ss_pred hccCCchhhccCcchhhhcccCChhHHHHHHHHHHCCCcccccccccCCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHH
Q 006923 14 KLGIDGAFADSAPNLKKNLHLLSSEQVELAKMLMEMGQSHLFEKWAAPGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTA 93 (625)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gQ~HL~~~~~~~~~~~~ek~~Ll~qL~~id~~~~~~l~~y~~~~ 93 (625)
++.++.....++++|+.++..||+++++|+++|.++||+|||+||++++.+++||++|++||..+|..|++|+..|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gQ~HL~~~w~~l~~~~~e~~~L~~qL~~ld~~y~g~l~~~~~~~ 81 (615)
T PLN02830 2 ALSVASKSDSSVPSLHSNLALLSPDQRALVRRLLELGQSHLFEHWPEPGVDDDDKRRLLEQVARLDESYPGGLAAYVSNA 81 (615)
T ss_pred CCcccccccccccccccccccCChhHHHHHHHHHHcCcHHHHhhhhccCCCHHHHHHHHHHHHhccccccchHHHHHHHH
Confidence 45667777778899999999999999999999999999999999999866799999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCCCCCCCCcccccCCCchhhHHHHHHHHhhcceEEEEEcCCccccCCccCCcccCCCcCCCCcch
Q 006923 94 RELLADSKAGKNPFDGFTPSVPTGEVLKFGDDTFINYEQAGVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCF 173 (625)
Q Consensus 94 ~~~l~~s~~~~~~~~~~~p~vP~~~~l~~~~~~~~~~~~~G~~~l~kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~ 173 (625)
.+++..+..+.++|+.+.|.+|.+..+++++.+..+|++.|+++|+|+|||+|||||||||||++||++||+++++++||
T Consensus 82 ~~~l~~s~~~~~~~~~i~P~vp~~~~~~~~~~~~~~~~~~Gl~~l~kvavllLaGGlGTRLG~~~pK~~lpv~~~~gkt~ 161 (615)
T PLN02830 82 KELLADSKEGVNPFEGWTPSVPEGEVLEYGSEEFVELEEAGLREAGNAAFVLVAGGLGERLGYSGIKVALPTETATGTCY 161 (615)
T ss_pred HHHHhhcccCCCchhhcccCCCccccccccchhhhHHHHHHHHHhCcEEEEEecCCcccccCCCCCCcceecccCCCCcH
Confidence 99998765677899999987788888888887778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHhCCCCCCCCCcEEEEEecceeEEecCCCceecCCC
Q 006923 174 LQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPK 253 (625)
Q Consensus 174 lql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~ 253 (625)
||++++||+++|+++.+...+..+.||||||||++||++|++||++|+|||++++||+||+|+++||+++++|++++++.
T Consensus 162 lql~~e~I~~lq~la~~~~~~~~~~IPl~IMTS~~T~~~T~~~~~~n~~FGl~~~~v~~F~Q~~~P~~~~~~g~~~l~~~ 241 (615)
T PLN02830 162 LQLYIESILALQERAKKRKAKKGRKIPLVIMTSDDTHARTLKLLERNDYFGMDPDQVTLLKQEKVACLMDNDARLALDPN 241 (615)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEEEECCcchhHHHHHHHHHCCccCCCccceEEEEcCcceeEecCCCcccccCC
Confidence 99999999999999875422233589999999999999999999999999999999999999999999888899999555
Q ss_pred CCCccccccCCCchhhHHHhhcChHHHHHHcCceEEEEEeCCCccccccchHHHHHHhhcCCceeeeeccCCccCccceE
Q 006923 254 NKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPRKAKEAIGGI 333 (625)
Q Consensus 254 ~~~~i~~~P~GhGdi~~aL~~sGlL~~l~~~G~~yi~v~~vDN~L~~~~DP~~lG~~~~~~~~~~~kvv~r~~~E~vG~i 333 (625)
++++++|+||||||+|.+|++||+|++|+++|+||+|||||||+|++.+||.|||||+.++++|++|||+|+|+|++|++
T Consensus 242 d~~~i~~~P~GhGdi~~aL~~sGlLd~l~~~G~~yi~v~~vDN~L~~~Adp~flG~~~~~~~d~~~kvv~K~~~E~vGvi 321 (615)
T PLN02830 242 DPYKIQTKPHGHGDVHALLYSSGLLDKWLSAGKKWVVFFQDTNGLVFKAIPAALGVSATKGFDMNSLAVPRKAKEAIGAI 321 (615)
T ss_pred CCCccccCCCCccHHHHHHHHCCCHHHHHHcCCEEEEEEeccchhhhcccHHHhHHHHhcCCceEEEEEECCCCcccceE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCceeEEEEeccCccHHHHhcCCCCCCCCCCCCCCCCccceeeEEEehhhhHHHHhhccCccccccCCcccCCC
Q 006923 334 TRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDAS 413 (625)
Q Consensus 334 ~~~~~~dG~~~v~nVEYsel~~~l~~~~~~~g~l~~~~gf~~f~gNinn~~~~l~~l~~~l~~~~~~lp~~vnpK~~d~~ 413 (625)
|++++.||+..++||||+|++++++.+++|+|++.+++||++|||||||+|++|++|+++|+++.+.||+||||||.|++
T Consensus 322 ~~~~~~dG~~l~~vVEYse~~~ll~~a~~p~g~l~~~~~~s~FPgNtN~L~v~L~a~~~~l~~~~~~lp~ivNpK~~d~~ 401 (615)
T PLN02830 322 AKLTHKDGREMVINVEYNQLDPLLRATGHPDGDVNDETGYSPFPGNINQLILKLGPYVKELAKTGGVIEEFVNPKYKDAT 401 (615)
T ss_pred EEEecCCCCeeeEEEeecccCHHHHhccCCCcccccccccccCCCCceeeEeeHHHHHHHHHhCCCccceeccCcccCCC
Confidence 99999999987788999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred CCcccCchhHhHhhccccccCCCCCceeEEEeeccceeecccCCCccc-ccCCCCCCCCChhhHHHHHHHHHHHHHHHcC
Q 006923 414 KTSFKSSTRLECMMQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDA-AKVPKGNPYHSATSGEMAIYCANSLILRKAG 492 (625)
Q Consensus 414 ~~~~~~~~rLE~~m~D~~~~f~~~~~~g~~~v~R~~~FsPvKN~~~~~-~~~~~g~~~dsp~t~~~dl~~~~~~~L~~~G 492 (625)
++.|+.++|||||||||++.+..++++||++++||.+|+||||+..+| +|+++|+|++||++++.|+|+.++++|+.+|
T Consensus 402 ~~v~q~~trle~~mq~f~~~~~~~~~vg~~v~~~~~~f~PVKn~~s~a~~k~~~~~~~~~~~s~e~d~y~~~~llL~~s~ 481 (615)
T PLN02830 402 KTAFKSPTRLECMMQDYPKTLPPSAKVGFTVFDNWLAYSPVKNSPADGAAKVPEGNPTHSATSGEMAIYGANCLILRKAG 481 (615)
T ss_pred CceeecchHHHHHHHHHhhhcCcccccCceecCchheeccccCChHHhhhhcccCCCccCcchhhHHHHHHHHHHHHhcC
Confidence 999999999999999999999888899999899999999999996666 6679999999999999999999999999999
Q ss_pred CcccCCccc-ccCCeeecCCCeEEEcCCCCCCHHHHhhhc-CCCCccCCCceEEEEeceEEecCeEEEeEEEEEcCCCCe
Q 006923 493 AQVDDPVQE-VFNGQEVEVWPRLTWKPKWGLTFSEIKNKV-SGSCSVSQKSTMVIKGRNVVLEDLSLNGALIIDSVDDAE 570 (625)
Q Consensus 493 ~~v~~~~~~-~~~g~~~~~~P~i~l~p~~~~~~~~~~~k~-~~~~~i~~~s~L~v~G~~~~~~~v~l~G~liI~a~~g~~ 570 (625)
+.+.++... .++++.++.+|+|.|+|.|+++++++++|| +++|+|+++|+|+|+|+++||+||+|||+|+|.|++|++
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~P~I~L~p~f~~~~~~~~~k~~~~~~si~~~s~L~v~G~~~~~~~v~LdG~viI~a~~~~~ 561 (615)
T PLN02830 482 ADVEEPVEDVVFNGIEVEVGPRIVLKPAFALTFSELKKKVAPGSVKISQRSTLVLEGADIVIENLSLDGALVVRAVPGAE 561 (615)
T ss_pred CccccCccccccCCcccCCCCeEEECchhhhHHHHHHHHhcCCCCcccCCCeEEEEeeeEEecCeEEEEEEEEEcCCCCe
Confidence 988765543 688899999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred eEeCC-eeEccceeEeeCCCCCCCCcccceeccceeeeeeeEEEEecCCCccccC
Q 006923 571 VRVGG-KVQNKGWTLEPVDHKDTSVPEEIRIRGFKINKLEQLERSYSEPGKFSLK 624 (625)
Q Consensus 571 ~~i~~-~v~N~g~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~~~~~g~~~~~ 624 (625)
|+|++ +|+|+||+|++++ .|+++||++|||||+++|.|+.++.|++||+|+|+
T Consensus 562 ~~i~g~~v~N~g~~~~~~~-~~~~~~~~~~irg~~~~~~e~~~~~~~~~g~~~~~ 615 (615)
T PLN02830 562 VTVGGLRVKNKGWTWEPVD-KGTSAPEEIRIRGFVIKKVETAELVFDKPGKYTVP 615 (615)
T ss_pred EEecCeEEecCCcEEEecC-CCCCcchhhhhcceeEeeeeeEEEEecCCCceeCC
Confidence 99988 9999999999999 67789999999999999999999999999999985
|
|
| >PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase | Back alignment and domain information |
|---|
| >PLN02474 UTP--glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose | Back alignment and domain information |
|---|
| >PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >KOG2638 consensus UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2 | Back alignment and domain information |
|---|
| >KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc | Back alignment and domain information |
|---|
| >cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose | Back alignment and domain information |
|---|
| >COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes | Back alignment and domain information |
|---|
| >COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional | Back alignment and domain information |
|---|
| >PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
| >PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form | Back alignment and domain information |
|---|
| >cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2 | Back alignment and domain information |
|---|
| >cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose | Back alignment and domain information |
|---|
| >cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins | Back alignment and domain information |
|---|
| >cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | Back alignment and domain information |
|---|
| >PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry | Back alignment and domain information |
|---|
| >cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars | Back alignment and domain information |
|---|
| >TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit | Back alignment and domain information |
|---|
| >PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases | Back alignment and domain information |
|---|
| >cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
| >cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
| >cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
| >cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
| >PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PLN02241 glucose-1-phosphate adenylyltransferase | Back alignment and domain information |
|---|
| >PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch | Back alignment and domain information |
|---|
| >cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose | Back alignment and domain information |
|---|
| >cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase | Back alignment and domain information |
|---|
| >PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate [] | Back alignment and domain information |
|---|
| >TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form | Back alignment and domain information |
|---|
| >cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2 | Back alignment and domain information |
|---|
| >PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR00454 conserved hypothetical protein TIGR00454 | Back alignment and domain information |
|---|
| >KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | Back alignment and domain information |
|---|
| >TIGR02091 glgC glucose-1-phosphate adenylyltransferase | Back alignment and domain information |
|---|
| >PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline | Back alignment and domain information |
|---|
| >TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit | Back alignment and domain information |
|---|
| >PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function | Back alignment and domain information |
|---|
| >cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide | Back alignment and domain information |
|---|
| >cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety | Back alignment and domain information |
|---|
| >PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B | Back alignment and domain information |
|---|
| >PLN02917 CMP-KDO synthetase | Back alignment and domain information |
|---|
| >COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family | Back alignment and domain information |
|---|
| >COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PF14134 DUF4301: Domain of unknown function (DUF4301) | Back alignment and domain information |
|---|
| >PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
| >PRK10122 GalU regulator GalF; Provisional | Back alignment and domain information |
|---|
| >COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial | Back alignment and domain information |
|---|
| >cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide | Back alignment and domain information |
|---|
| >TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
| >COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] | Back alignment and domain information |
|---|
| >cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production | Back alignment and domain information |
|---|
| >TIGR03202 pucB xanthine dehydrogenase accessory protein pucB | Back alignment and domain information |
|---|
| >PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed | Back alignment and domain information |
|---|
| >PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed | Back alignment and domain information |
|---|
| >TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional | Back alignment and domain information |
|---|
| >PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional | Back alignment and domain information |
|---|
| >cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose | Back alignment and domain information |
|---|
| >COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14500 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MoaC/MobA; Provisional | Back alignment and domain information |
|---|
| >PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional | Back alignment and domain information |
|---|
| >COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule | Back alignment and domain information |
|---|
| >PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional | Back alignment and domain information |
|---|
| >cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity | Back alignment and domain information |
|---|
| >TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase | Back alignment and domain information |
|---|
| >cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat | Back alignment and domain information |
|---|
| >COG4750 LicC CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG2068 Uncharacterized MobA-related protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 625 | ||||
| 3oh0_A | 641 | Protein Structure Of Usp From L. Major Bound To Uri | 2e-75 | ||
| 3ogz_A | 630 | Protein Structure Of Usp From L. Major In Apo-Form | 2e-75 | ||
| 2yqc_A | 486 | Crystal Structure Of Uridine-Diphospho-N-Acetylgluc | 3e-19 | ||
| 1jvd_A | 522 | Crystal Structure Of Human Agx2 Complexed With Udpg | 4e-12 | ||
| 1jv1_A | 505 | Crystal Structure Of Human Agx1 Complexed With Udpg | 4e-12 | ||
| 1vm8_A | 534 | Crystal Structure Of Udp-N-Acetylglucosamine Pyroph | 3e-11 | ||
| 3oc9_A | 405 | Crystal Structure Of Putative Udp-N-Acetylglucosami | 1e-09 | ||
| 3gue_A | 484 | Crystal Structure Of Udp-Glucose Phosphorylase From | 1e-04 |
| >pdb|3OH0|A Chain A, Protein Structure Of Usp From L. Major Bound To Uridine-5'- Triphosphate Length = 641 | Back alignment and structure |
|
| >pdb|3OGZ|A Chain A, Protein Structure Of Usp From L. Major In Apo-Form Length = 630 | Back alignment and structure |
| >pdb|2YQC|A Chain A, Crystal Structure Of Uridine-Diphospho-N-Acetylglucosamine Pyrophosphorylase From Candida Albicans, In The Apo-Like Form Length = 486 | Back alignment and structure |
| >pdb|1JVD|A Chain A, Crystal Structure Of Human Agx2 Complexed With Udpglcnac Length = 522 | Back alignment and structure |
| >pdb|1JV1|A Chain A, Crystal Structure Of Human Agx1 Complexed With Udpglcnac Length = 505 | Back alignment and structure |
| >pdb|1VM8|A Chain A, Crystal Structure Of Udp-N-Acetylglucosamine Pyrophosphorylase (Agx2) From Mus Musculus At 2.50 A Resolution Length = 534 | Back alignment and structure |
| >pdb|3OC9|A Chain A, Crystal Structure Of Putative Udp-N-Acetylglucosamine Pyrophosphorylase From Entamoeba Histolytica Length = 405 | Back alignment and structure |
| >pdb|3GUE|A Chain A, Crystal Structure Of Udp-Glucose Phosphorylase From Trypanosoma Brucei, (Tb10.389.0330) Length = 484 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Length = 630 | Back alignment and structure |
|---|
Score = 444 bits (1143), Expect = e-149
Identities = 204/632 (32%), Positives = 298/632 (47%), Gaps = 59/632 (9%)
Query: 35 LSSEQVELAKMLME--MGQSHLFEKWAAPGVDDN-EKRAFFDQVAKLNSSYPGGLKSYIK 91
+S L + L + Q HLFE W + N + A + ++ YPGG+ YI+
Sbjct: 5 SNSNLQALREELCTPGLDQGHLFEGWPETVDECNERQIALLTDLYMFSNMYPGGVAQYIR 64
Query: 92 TARELLADSKAGKNP-FDGFTPSVPTGEVLKFGDDTFINYEQAGVKEAKNAAFVLVAGGL 150
ELLA + P + L E AG FVLVAGGL
Sbjct: 65 NGHELLARESEEVDFAALEMPPLIFEAPSLHRRTAERTALENAGTAMLCKTVFVLVAGGL 124
Query: 151 GERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTH 210
GERLGY+ IKV+LP ET T T +L Y+ + +E+PF IMTSDDTH
Sbjct: 125 GERLGYSSIKVSLPVETATNTTYLAYYLRWAQRVGG----------KEVPFVIMTSDDTH 174
Query: 211 SRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHA 270
RT +LL ++ + +LKQ +V C D+ A LA+D K + KPHGHGDVH+
Sbjct: 175 DRTLQLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLALDETGK--LLRKPHGHGDVHS 229
Query: 271 LLYSSG------------------LLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSAT 312
L+Y++ L+ +W AG + ++F QDTN IP SL +SA
Sbjct: 230 LIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIPISLALSAE 289
Query: 313 KQYHVNSLAVPRKAKEAIGGITRLTHADGR-SMVINVEYNQLDPLLRATGFPDGD-VNCE 370
+N +PR KE IG + R G +V NVEYN + RA GD V+
Sbjct: 290 HSLDMNFTCIPRVPKEPIGLLCRTKKNSGDPWLVANVEYNVFAEVSRALNKDGGDEVSDP 349
Query: 371 TGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDY 430
TG+SPFPG++N L+ +L Y++ L+++ G + EF+NPKY D ++ SFK R+E +MQD
Sbjct: 350 TGFSPFPGSVNTLVFKLSSYVDRLRESHGIVPEFINPKYSDETRRSFKKPARIESLMQDI 409
Query: 431 PKTLPPS-AKVGFTVMDTWLAYAPVKNNPEDA-AKVPKGNPYHSATSGEMAIYCANSLIL 488
+VG TV + + +Y PVKN+ E+A V +GN + A +GE A Y L
Sbjct: 410 ALLFSEDDYRVGGTVFERF-SYQPVKNSLEEAAGLVAQGNGAYCAATGEAAFYELQRRRL 468
Query: 489 RKAGAQVDDP----VQEVFNGQEVEVWPRLTWKPKWGLTFSEI----KNKVSGSCSVSQK 540
+ G + V + V ++P + + S + Q
Sbjct: 469 KAIGLPLFYSSQPEVTVAKDAFGVRLFPIIVLDTVCASSGSLDDLARVFPTPEKVHIDQH 528
Query: 541 STMVIKGRNVVLEDLSLNGALII----DSVDDAEVRVGGKVQNKGWTLEPV----DHKDT 592
ST++++G V++E L L GAL I DS+ V V+N GW++ + +D+
Sbjct: 529 STLIVEG-RVIIESLELYGALTIRGPTDSMALPHVVRNAVVRNAGWSVHAILSLCAGRDS 587
Query: 593 SVPEEIRIRGFKINKLEQLERSYSEPGKFSLK 624
+ E RIRGF + K + G+
Sbjct: 588 RLSEVDRIRGFVLKKTAMAVMDCNTKGESEAG 619
|
| >2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Length = 486 | Back alignment and structure |
|---|
| >1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Length = 505 | Back alignment and structure |
|---|
| >3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Length = 405 | Back alignment and structure |
|---|
| >2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Length = 505 | Back alignment and structure |
|---|
| >3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Length = 528 | Back alignment and structure |
|---|
| >3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Length = 484 | Back alignment and structure |
|---|
| >2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Length = 488 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 625 | |||
| 3ogz_A | 630 | UDP-sugar pyrophosphorylase; LEFT handed beta heli | 100.0 | |
| 3gue_A | 484 | UTP-glucose-1-phosphate uridylyltransferase 2; pho | 100.0 | |
| 3r3i_A | 528 | UTP--glucose-1-phosphate uridylyltransferase; ross | 100.0 | |
| 2yqc_A | 486 | UDP-N-acetylglucosamine pyrophosphorylase; uridine | 100.0 | |
| 1jv1_A | 505 | Glcnac1P uridyltransferase isoform 1: AGX1; nucleo | 100.0 | |
| 2oeg_A | 505 | UTP-glucose-1-phosphate uridylyltransferase 2, put | 100.0 | |
| 3oc9_A | 405 | UDP-N-acetylglucosamine pyrophosphorylase; structu | 100.0 | |
| 2icy_A | 469 | Probable UTP-glucose-1-phosphate uridylyltransfera | 100.0 | |
| 2i5k_A | 488 | UTP--glucose-1-phosphate uridylyltransferase; LEFT | 100.0 | |
| 3st8_A | 501 | Bifunctional protein GLMU; acetyltransferase, pyro | 98.51 | |
| 4ecm_A | 269 | Glucose-1-phosphate thymidylyltransferase; HET: DA | 97.77 | |
| 4fce_A | 459 | Bifunctional protein GLMU; GLMU. csgid, niaid, str | 97.77 | |
| 2qh5_A | 308 | PMI, ALGA, mannose-6-phosphate isomerase; structur | 97.65 | |
| 3oam_A | 252 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 97.61 | |
| 1fxo_A | 293 | Glucose-1-phosphate thymidylyltransferase; rhamnos | 97.5 | |
| 3brk_X | 420 | Glucose-1-phosphate adenylyltransferase; ADP-gluco | 97.49 | |
| 1yp2_A | 451 | Glucose-1-phosphate adenylyltransferase small subu | 97.47 | |
| 2y6p_A | 234 | 3-deoxy-manno-octulosonate cytidylyltransferase; l | 97.34 | |
| 1lvw_A | 295 | Glucose-1-phosphate thymidylyltransferase; protein | 97.32 | |
| 3k8d_A | 264 | 3-deoxy-manno-octulosonate cytidylyltransferase; K | 97.27 | |
| 1h7e_A | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; n | 97.25 | |
| 1mc3_A | 296 | Glucose-1-phosphate thymidylyltransferase; glucose | 97.19 | |
| 3tqd_A | 256 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 97.18 | |
| 3pnn_A | 303 | Conserved domain protein; structural genomics, PSI | 97.12 | |
| 2v0h_A | 456 | Bifunctional protein GLMU; cell WALL, magnesium, c | 97.04 | |
| 1hm9_A | 468 | GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr | 96.96 | |
| 2xwl_A | 223 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; | 96.96 | |
| 1vic_A | 262 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 96.93 | |
| 1qwj_A | 229 | Cytidine monophospho-N-acetylneuraminic acid synth | 96.92 | |
| 3q80_A | 231 | 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; | 96.9 | |
| 2wee_A | 197 | MOBA-related protein; unknown function; 1.65A {Myc | 96.9 | |
| 2waw_A | 199 | MOBA relate protein; unknown function; HET: PGE; 1 | 96.86 | |
| 3f1c_A | 246 | Putative 2-C-methyl-D-erythritol 4-phosphate cytid | 96.78 | |
| 1ezi_A | 228 | CMP-N-acetylneuraminic acid synthetase; homodimer, | 96.69 | |
| 3juk_A | 281 | UDP-glucose pyrophosphorylase (GALU); transfer; HE | 96.68 | |
| 1tzf_A | 259 | Glucose-1-phosphate cytidylyltransferase; nucleoti | 96.67 | |
| 2yc3_A | 228 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran | 96.66 | |
| 1i52_A | 236 | 4-diphosphocytidyl-2-C-methylerythritol synthase; | 96.61 | |
| 1vgw_A | 231 | 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; | 96.53 | |
| 2vsh_A | 236 | TARI, 2-C-methyl-D-erythritol 4-phosphate cytidyly | 96.51 | |
| 1vpa_A | 234 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; | 96.49 | |
| 3d5n_A | 197 | Q97W15_sulso; NESG, SSR125, structural genomics, P | 96.45 | |
| 1e5k_A | 201 | Molybdopterin-guanine dinucleotide biosynthesis pr | 96.44 | |
| 3rsb_A | 196 | Adenosylcobinamide-phosphate guanylyltransferase; | 96.39 | |
| 2px7_A | 236 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 96.28 | |
| 1jyk_A | 254 | LICC protein, CTP:phosphocholine cytidylytransfera | 96.07 | |
| 3ngw_A | 208 | Molybdopterin-guanine dinucleotide biosynthesis P | 96.06 | |
| 4fcu_A | 253 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 96.05 | |
| 2x65_A | 336 | Mannose-1-phosphate guanylyltransferase; nucleotid | 95.97 | |
| 2e3d_A | 302 | UTP--glucose-1-phosphate uridylyltransferase; UDP- | 95.85 | |
| 4evw_A | 255 | Nucleoside-diphosphate-sugar pyrophosphorylase; st | 95.85 | |
| 2ux8_A | 297 | Glucose-1-phosphate uridylyltransferase; UGPG, GAL | 95.78 | |
| 2e8b_A | 201 | Probable molybdopterin-guanine dinucleotide biosy | 95.74 | |
| 2xme_A | 232 | CTP-inositol-1-phosphate cytidylyltransferase; CDP | 95.48 | |
| 2pa4_A | 323 | UTP-glucose-1-phosphate uridylyltransferase; phosp | 95.34 | |
| 1w55_A | 371 | ISPD/ISPF bifunctional enzyme; biosynthetic pathwa | 95.13 | |
| 2cu2_A | 337 | Putative mannose-1-phosphate guanylyl transferase; | 94.71 | |
| 2dpw_A | 232 | Hypothetical protein TTHA0179; transferase, struct | 93.95 | |
| 2ggo_A | 401 | 401AA long hypothetical glucose-1-phosphate thymid | 93.82 |
| >3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-135 Score=1127.33 Aligned_cols=570 Identities=35% Similarity=0.599 Sum_probs=511.3
Q ss_pred ChhHHHHHHHHHH--CCCccccccccc-CCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHhhccCCCCCCCCCC-
Q 006923 36 SSEQVELAKMLME--MGQSHLFEKWAA-PGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFT- 111 (625)
Q Consensus 36 ~~~~~~l~~~L~~--~gQ~HL~~~~~~-~~~~~~ek~~Ll~qL~~id~~~~~~l~~y~~~~~~~l~~s~~~~~~~~~~~- 111 (625)
.++.++|+++|.+ +||+|||+||++ ++.+++||++|++||.+||..|++||.+|++++++++ .+..+.++++.+.
T Consensus 6 ~~~~~~L~~~l~~~~~gQ~HLf~~w~~~l~~~~~e~~~L~~qL~~~d~~~~~gl~~~~~~a~~~l-~~~~~~~~~~~~~p 84 (630)
T 3ogz_A 6 NSNLQALREELCTPGLDQGHLFEGWPETVDECNERQIALLTDLYMFSNMYPGGVAQYIRNGHELL-ARESEEVDFAALEM 84 (630)
T ss_dssp HHHHHHHHHHHTSTTTCCGGGGTTCCSSGGGCCHHHHHHHHHHHHGGGTSTTHHHHHHHHHHHHH-HHHTSCCCCSEEEC
T ss_pred hhhHHHHHHHhhhccCCchhhhhhcccccCCCHHHHHHHHHHHHhhChhhhhhHHHHHHHHHHHh-hccccCCccccccc
Confidence 3566889999997 999999999998 4433899999999999999999999999999999999 4455667778887
Q ss_pred -CCCCCcccccCCCchhhHHHHHHHHhhcceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhh
Q 006923 112 -PSVPTGEVLKFGDDTFINYEQAGVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCR 190 (625)
Q Consensus 112 -p~vP~~~~l~~~~~~~~~~~~~G~~~l~kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~ 190 (625)
|.+|.+..++.+++++.+|+++|+++|+|+|||+||||||||||+++||+++|+++++++||||++++||+ ++++
T Consensus 85 ~P~~~~~~~l~~~~~~~~~~~~~Gl~~i~kvavvllaGGlGTRLG~~~pK~~lpv~~~s~ks~lql~~e~i~---~~~g- 160 (630)
T 3ogz_A 85 PPLIFEAPSLHRRTAERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKVSLPVETATNTTYLAYYLRWAQ---RVGG- 160 (630)
T ss_dssp CSCEEECCCTTCCCHHHHHHHHHHHHHGGGEEEEEECCCEEGGGTEEEEGGGSBSCTTTCCBHHHHHHHHHH---HHHC-
T ss_pred CCCCCccccccCCHHHHHHHHHHhHHHHhhceEEEecCCcccccCCCCCcccceecCCCCCcHHHHHHHHHH---HHhC-
Confidence 33345667777778889999999999999999999999999999999999999999999999999999999 3454
Q ss_pred hccCCcccccEEEecCccchHHHHHHHHhCCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhH
Q 006923 191 LAEGKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHA 270 (625)
Q Consensus 191 ~~~g~~~~iPl~IMTS~~T~~~T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~ 270 (625)
+.||||||||++||++|++||++ ||++++||+||+|+++||+++++|++++ +++++++|+|+||||+|.
T Consensus 161 ------~~iPl~IMTS~~T~~~T~~~~~~---fgl~~~~V~~F~Q~~~P~i~~~~g~l~l--~~~~~i~~~P~GhGdv~~ 229 (630)
T 3ogz_A 161 ------KEVPFVIMTSDDTHDRTLQLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLAL--DETGKLLRKPHGHGDVHS 229 (630)
T ss_dssp ------TTCCEEEEECTTTHHHHHHHHHH---TTCCCTTEEEEECCCEECBSSTTCCBCB--CTTSSBCEECCCTTHHHH
T ss_pred ------CCCcEEEEecccchHHHHHHHHH---hCCCcccEEEEEcCCEEEEecCCCceee--cCCCcccCCCCCCHHHHH
Confidence 58999999999999999999999 9999999999999999999878899999 667899999999999999
Q ss_pred HHhhcC------------------hHHHHHHcCceEEEEEeCCCccccccchHHHHHHhhcCCceeeeeccCCccCccce
Q 006923 271 LLYSSG------------------LLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPRKAKEAIGG 332 (625)
Q Consensus 271 aL~~sG------------------lL~~l~~~G~~yi~v~~vDN~L~~~~DP~~lG~~~~~~~~~~~kvv~r~~~E~vG~ 332 (625)
+|+++| +|++|+++|+||+||+||||+|++++||.||||++.++++|++|||+|+|+|++|+
T Consensus 230 aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~p~E~vG~ 309 (630)
T 3ogz_A 230 LIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIPISLALSAEHSLDMNFTCIPRVPKEPIGL 309 (630)
T ss_dssp HHHHCBC--------------CCBHHHHHHHTTCCEEEEECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCCSSCSSCE
T ss_pred HHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEEccCCccccccCHHHhHHHHhcCCCEEEEEEECCCCcceee
Confidence 999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCce-eEEEEeccCccHHHHhcCCCCCC-CCCCCCCCCCccceeeEEEehhhhHHHHhhccCccccccCCccc
Q 006923 333 ITRLTHADGRS-MVINVEYNQLDPLLRATGFPDGD-VNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYK 410 (625)
Q Consensus 333 i~~~~~~dG~~-~v~nVEYsel~~~l~~~~~~~g~-l~~~~gf~~f~gNinn~~~~l~~l~~~l~~~~~~lp~~vnpK~~ 410 (625)
+|++++.||++ +|+||||+|++++++..++++|+ +.+.++|++||||||||||+|++|.+.+.++++.||+||||||.
T Consensus 310 l~~~~~~dGk~~~v~vVEYsei~~~~~~~~~~~g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~~~~~ip~~vNpK~~ 389 (630)
T 3ogz_A 310 LCRTKKNSGDPWLVANVEYNVFAEVSRALNKDGGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRESHGIVPEFINPKYS 389 (630)
T ss_dssp EEEEESSTTSCCEEEEECHHHHHHHHHHC------------CCCSSCEEEEEEEEEHHHHHHHHHHHTTCCCCEECCCBS
T ss_pred EEEEecCCCceeeeeEEEeccCCHhHhhccCCCccccccccccccccccceeeeEEHHHHHHHHHhccCccceecCCccc
Confidence 99988899999 88889999999999999999998 77788899999999999999999999999888999999999999
Q ss_pred CCCCCcccCchhHhHhhccccccCCCCC-ceeEEEeeccceeecccCCCcccc-cCCCCCCCCChhhHHHHHHHHHHHHH
Q 006923 411 DASKTSFKSSTRLECMMQDYPKTLPPSA-KVGFTVMDTWLAYAPVKNNPEDAA-KVPKGNPYHSATSGEMAIYCANSLIL 488 (625)
Q Consensus 411 d~~~~~~~~~~rLE~~m~D~~~~f~~~~-~~g~~~v~R~~~FsPvKN~~~~~~-~~~~g~~~dsp~t~~~dl~~~~~~~L 488 (625)
|.+++.+++++||||||||++++|+..+ ++++++|+| .||+||||++++|+ |+++|++.|||.||++|||+++++||
T Consensus 390 d~~~~~~~~~~qLEt~m~d~~~~F~~~~~~v~~~~V~R-~~F~PVKn~~~~a~~k~~~g~~~~sp~t~~~dly~~~~~~L 468 (630)
T 3ogz_A 390 DETRRSFKKPARIESLMQDIALLFSEDDYRVGGTVFER-FSYQPVKNSLEEAAGLVAQGNGAYCAATGEAAFYELQRRRL 468 (630)
T ss_dssp SSSSCCBSSCBCEECCGGGGGGGCCTTTCCEEEEECCG-GGCCBCCBCHHHHHHHHHTTCCCCBHHHHHHHHHHHHHHHH
T ss_pred CCcccccCcchhhhhHHHHHHHhccccCcceeEEEECC-CeeecccCChhHhhhhhccCCCcCChHHHHHHHHHHHHHHH
Confidence 9999889999999999999999997445 889999999 99999999998884 46999999999999999999999999
Q ss_pred HHcCCccc---CCcccccCCe-eecCCCeEEEcCCCCCC--HHHHhhhcCC--CCccCCCceEEEEeceEEecCeEEEeE
Q 006923 489 RKAGAQVD---DPVQEVFNGQ-EVEVWPRLTWKPKWGLT--FSEIKNKVSG--SCSVSQKSTMVIKGRNVVLEDLSLNGA 560 (625)
Q Consensus 489 ~~~G~~v~---~~~~~~~~g~-~~~~~P~i~l~p~~~~~--~~~~~~k~~~--~~~i~~~s~L~v~G~~~~~~~v~l~G~ 560 (625)
++||++|+ ++...+++|. .++.+|+|.|+|+|+.+ ++++++||++ +++|+++|+|+|+|+ ++++||.|||+
T Consensus 469 ~~aG~~v~~~~~~~~~~~~~~~~~~~~P~i~l~p~~~~~~~~~~~~~k~~~~~~~~i~~~S~L~veg~-v~~~~l~LdG~ 547 (630)
T 3ogz_A 469 KAIGLPLFYSSQPEVTVAKDAFGVRLFPIIVLDTVCASSGSLDDLARVFPTPEKVHIDQHSTLIVEGR-VIIESLELYGA 547 (630)
T ss_dssp HHTTCCCCCCCSCSEEETTTTEEECCCSEEEECHHHHTTCCHHHHHHHCSSGGGEEECTTCEEEEESS-EEESCEEEESE
T ss_pred HHcCceecccccchhhhhcCccccCCCCEEEEeccccccccHHHHHHHhCCCCCceecCCcEEEEEEE-EEEEEEEEeeE
Confidence 99999998 4666678888 89999999999999999 9999999999 789999999999999 99999999999
Q ss_pred EEEEcCCCCe----eEeCCeeEccceeEeeC----CCCCCCCcccceeccceeeeeeeEEEEecCCCcccc
Q 006923 561 LIIDSVDDAE----VRVGGKVQNKGWTLEPV----DHKDTSVPEEIRIRGFKINKLEQLERSYSEPGKFSL 623 (625)
Q Consensus 561 liI~a~~g~~----~~i~~~v~N~g~~~~~~----~~~~~~~~~~~~~rg~~~~~~~~~~~~~~~~g~~~~ 623 (625)
|+|.|++|++ |.++++|+|+||+|+++ +++|+++||++|||||+++|+|+++++|++||+|..
T Consensus 548 lvI~a~~~~~~~~~v~~~~~v~n~g~~~~~~~~~~~~~~~~~~~~~~irg~~~~~~e~~~~~~~~~~~~~~ 618 (630)
T 3ogz_A 548 LTIRGPTDSMALPHVVRNAVVRNAGWSVHAILSLCAGRDSRLSEVDRIRGFVLKKTAMAVMDCNTKGESEA 618 (630)
T ss_dssp EEEECCSSTTSCCEEECSEEEECCCCEEEECCTTC----CCCCHHHHTTTEEEECCCCEEECC--------
T ss_pred EEEEcCCCCccCceEEecceEecCCcEEEEcccccccccCCCChhhcccceeEEeeeEEEEEecCCCcccc
Confidence 9999999999 88888999999999999 777889999999999999999999999999999974
|
| >3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} | Back alignment and structure |
|---|
| >3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A | Back alignment and structure |
|---|
| >2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* | Back alignment and structure |
|---|
| >1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* | Back alignment and structure |
|---|
| >2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* | Back alignment and structure |
|---|
| >3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* | Back alignment and structure |
|---|
| >4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* | Back alignment and structure |
|---|
| >4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* | Back alignment and structure |
|---|
| >2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori} | Back alignment and structure |
|---|
| >3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ... | Back alignment and structure |
|---|
| >3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
| >1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* | Back alignment and structure |
|---|
| >2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6 | Back alignment and structure |
|---|
| >3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* | Back alignment and structure |
|---|
| >1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A* | Back alignment and structure |
|---|
| >1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6 | Back alignment and structure |
|---|
| >3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 | Back alignment and structure |
|---|
| >3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
| >2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* | Back alignment and structure |
|---|
| >1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* | Back alignment and structure |
|---|
| >2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A* | Back alignment and structure |
|---|
| >1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A* | Back alignment and structure |
|---|
| >1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A* | Back alignment and structure |
|---|
| >2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A | Back alignment and structure |
|---|
| >2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP} | Back alignment and structure |
|---|
| >3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0 | Back alignment and structure |
|---|
| >1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A | Back alignment and structure |
|---|
| >3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* | Back alignment and structure |
|---|
| >1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A* | Back alignment and structure |
|---|
| >2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A* | Back alignment and structure |
|---|
| >1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A | Back alignment and structure |
|---|
| >1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A | Back alignment and structure |
|---|
| >2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A* | Back alignment and structure |
|---|
| >1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
| >1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A* | Back alignment and structure |
|---|
| >3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
| >1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A* | Back alignment and structure |
|---|
| >3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A | Back alignment and structure |
|---|
| >2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A* | Back alignment and structure |
|---|
| >2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli} | Back alignment and structure |
|---|
| >4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae} | Back alignment and structure |
|---|
| >2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea} | Back alignment and structure |
|---|
| >2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A* | Back alignment and structure |
|---|
| >2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
| >1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A* | Back alignment and structure |
|---|
| >2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20 | Back alignment and structure |
|---|
| >2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19 | Back alignment and structure |
|---|
| >2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 625 | ||||
| d1jv1a_ | 501 | c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphor | 1e-104 | |
| d2icya2 | 378 | c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 | 6e-57 |
| >d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Length = 501 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: UDP-N-acetylglucosamine pyrophosphorylase species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Score = 324 bits (831), Expect = e-104
Identities = 107/536 (19%), Positives = 189/536 (35%), Gaps = 57/536 (10%)
Query: 41 ELAKMLMEMGQSHLFEKWAAPGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADS 100
+L L + GQ HL W +++ ++ + ++ +N L + + A E S
Sbjct: 5 DLKLTLSKAGQEHLLRFW--NELEEAQQVELYAELQAMN---FEELNFFFQKAIEGFNQS 59
Query: 101 KAGKNPFDGFTPSVPTG-EVLKFGDDTFINYEQAGVKEAKN--AAFVLVAGGLGERLGYN 157
KN P D +E G+ + A +L+AGG G RLG
Sbjct: 60 SHQKNVDARMEPVPREVLGSATRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVA 119
Query: 158 GIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELL 217
K + Q E IL LQ+ + + G IP+ IMTS T T+E
Sbjct: 120 YPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYY-GNKCIIPWYIMTSGRTMESTKEFF 178
Query: 218 ESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGL 277
+ YFG+K V +Q + + + + + K ++ P G+G ++ L + +
Sbjct: 179 TKHKYFGLKKENVIFFQQGMLPAMSFDGKIIL---EEKNKVSMAPDGNGGLYRALAAQNI 235
Query: 278 LKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPR-KAKEAIGGITRL 336
+++ G+ + + N L+ A P +G K + V + E +G + R+
Sbjct: 236 VEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV 295
Query: 337 THADGRSMVINVEYNQLDPLLRATGFPDGDVNCETGYSPFPGNINQLILELGPYMEELKK 396
DG V+ EY+++ DG + GNI + + +
Sbjct: 296 ---DGVYQVV--EYSEISLATAQKRSSDGRLLF------NAGNIANHFFTVPFLRDVVNV 344
Query: 397 TGGAIKEFVNPK---YKDASKTSFKSST----RLECMMQDYPKTLPPSAKVGFTVMDTWL 449
++ V K Y D K ++E + D + K +
Sbjct: 345 YEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFD---IFQFAKKFVVYEVLRED 401
Query: 450 AYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYCANSLILRKAGAQVDDPVQEVFNGQEVE 509
++P+KN K + T+ A+ + + AG D E
Sbjct: 402 EFSPLKNADSQNGK-------DNPTTARHALMSLHHCWVLNAGGHFID-----------E 443
Query: 510 VWPRLTWKPKWGLTFSEIKNKVSGSCSVSQKSTMVIKGRNVVLEDLSLNGALIIDS 565
RL P+ + N V C +S + +G + D + LIID
Sbjct: 444 NGSRLPAIPR-----LKDANDVPIQCEISPLISYAGEGLESYVADKEFHAPLIIDE 494
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 625 | |||
| d1jv1a_ | 501 | UDP-N-acetylglucosamine pyrophosphorylase {Human ( | 100.0 | |
| d2icya2 | 378 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 100.0 | |
| d2icya1 | 83 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 99.65 | |
| d1lvwa_ | 295 | RmlA (RfbA) {Archaeon Methanobacterium thermoautot | 97.89 | |
| d1mc3a_ | 291 | RffH {Escherichia coli [TaxId: 562]} | 97.86 | |
| d1fxoa_ | 292 | RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} | 97.82 | |
| d2cu2a2 | 268 | Putative mannose-1-phosphate guanylyl transferase | 97.78 | |
| d1yp2a2 | 307 | Glucose-1-phosphate adenylyltransferase small subu | 97.76 | |
| d1g97a2 | 250 | N-acetylglucosamine 1-phosphate uridyltransferase | 97.69 | |
| d2oi6a2 | 248 | N-acetylglucosamine 1-phosphate uridyltransferase | 97.51 | |
| d1i52a_ | 225 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.41 | |
| d1w77a1 | 226 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.34 | |
| d1tzfa_ | 259 | Glucose-1-phosphate cytidylyltransferase RfbF {Sal | 97.32 | |
| d1w55a1 | 205 | IspD/IspF bifunctional enzyme, CDP-me synthase dom | 97.13 | |
| d1jyka_ | 229 | CTP:phosphocholine cytidylytransferase LicC {Strep | 97.11 | |
| d1vgwa_ | 226 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.04 | |
| d1vpaa_ | 221 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.0 | |
| d1e5ka_ | 188 | Molybdenum cofactor biosynthesis protein MobA {Esc | 96.91 | |
| d2dpwa1 | 231 | Uncharacterized protein TTHA0179 {Thermus thermoph | 95.55 |
| >d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: UDP-N-acetylglucosamine pyrophosphorylase species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Probab=100.00 E-value=4.6e-99 Score=831.16 Aligned_cols=456 Identities=21% Similarity=0.304 Sum_probs=390.4
Q ss_pred hHHHHHHHHHHCCCcccccccccCCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCc
Q 006923 38 EQVELAKMLMEMGQSHLFEKWAAPGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTG 117 (625)
Q Consensus 38 ~~~~l~~~L~~~gQ~HL~~~~~~~~~~~~ek~~Ll~qL~~id~~~~~~l~~y~~~~~~~l~~s~~~~~~~~~~~p~vP~~ 117 (625)
+.++|+++|.++||+|||++|+++ +++||++|++||.++| ++++.+|++++.+.+..++...++|+.+.| +|+.
T Consensus 2 ~~~~l~~~L~~~gQ~HLl~~~~~l--~~~ek~~L~~qL~~id---~~~l~~~~~~a~~~~~~~~~~~~~~~~~~p-~p~~ 75 (501)
T d1jv1a_ 2 NINDLKLTLSKAGQEHLLRFWNEL--EEAQQVELYAELQAMN---FEELNFFFQKAIEGFNQSSHQKNVDARMEP-VPRE 75 (501)
T ss_dssp CHHHHHHHHHHTTCGGGGTTGGGS--CHHHHHHHHHHHHTCC---HHHHHHHHHHHHHCC-----------CCBC-CCGG
T ss_pred CHHHHHHHHHHhCcHHHHhhhhhC--CHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHhhhcccccCccccccC-CChh
Confidence 467899999999999999999995 5999999999999999 568889999988776666666777888877 4554
Q ss_pred cc--ccCCCchhhHHHHHHHHhhc--ceEEEEEcCCccccCCccCCcccCCCcCCCCcchHHHHHHHHHHHHHHhhhhcc
Q 006923 118 EV--LKFGDDTFINYEQAGVKEAK--NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAE 193 (625)
Q Consensus 118 ~~--l~~~~~~~~~~~~~G~~~l~--kvavvlLaGGlGTRLG~~~pK~~lpv~~~~~~s~lql~~~~i~~l~~~~~~~~~ 193 (625)
.. .....+.+.+|++.|+++|+ |||||+||||||||||+++||+++|+++++++||||++++||+++++++..+ +
T Consensus 76 ~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvllaGG~GTRLG~~~pK~~~~v~~~~~ksllql~~e~i~~l~~~a~~~-~ 154 (501)
T d1jv1a_ 76 VLGSATRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKY-Y 154 (501)
T ss_dssp GEEETTTTGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHH-H
T ss_pred hhcccccChHHHHHHHHhhHHHHhcCCEEEEEECCCccccCCCCCCceeeeeccCCCCcHHHHHHHHHHHHHHHHHHh-c
Confidence 32 23344567889999999996 9999999999999999999999999999999999999999999999998754 4
Q ss_pred CCcccccEEEecCccchHHHHHHHHhCCCCCCCCCcEEEEEecceeEEecCCCceecCCCCCCccccccCCCchhhHHHh
Q 006923 194 GKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLY 273 (625)
Q Consensus 194 g~~~~iPl~IMTS~~T~~~T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~ 273 (625)
|....||||||||+.||++|++||++|+|||+++++|+||+|+++||++ .+|++++ +++++++|+|+||||+|.+|+
T Consensus 155 ~~~~~iPl~IMtS~~T~~~t~~~l~~~~~FGl~~~~v~~f~Q~~~P~~~-~~g~i~~--~~~~~i~~~P~GhG~i~~aL~ 231 (501)
T d1jv1a_ 155 GNKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMS-FDGKIIL--EEKNKVSMAPDGNGGLYRALA 231 (501)
T ss_dssp SSCCCCCEEEEECTTTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEE-TTSCBCE--EETTEECEEECCGGGHHHHHH
T ss_pred CCCCCceEEEECChhHhHHHHHHHHhccccCCCcCceEEEEecCcceEC-CCCCccc--CCCCcccccCCCchHHHHHHH
Confidence 5556899999999999999999999999999999999999999999995 7899999 788999999999999999999
Q ss_pred hcChHHHHHHcCceEEEEEeCCCccccccchHHHHHHhhcCCceeeeeccCC-ccCccceEEEEecCCCceeEEEEeccC
Q 006923 274 SSGLLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPRK-AKEAIGGITRLTHADGRSMVINVEYNQ 352 (625)
Q Consensus 274 ~sGlL~~l~~~G~~yi~v~~vDN~L~~~~DP~~lG~~~~~~~~~~~kvv~r~-~~E~vG~i~~~~~~dG~~~v~nVEYse 352 (625)
+||+|++|+++|++|++|+||||+|++++||.|||||+.++++|++|||+|+ |.|++|++|++ ||+.++ |||+|
T Consensus 232 ~sG~ld~l~~~Gi~yi~v~~vDN~l~~~~Dp~~lG~~~~~~~~~~~kvv~k~~~~e~~G~l~~~---dg~~~v--vEyse 306 (501)
T d1jv1a_ 232 AQNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV---DGVYQV--VEYSE 306 (501)
T ss_dssp HTTHHHHHHHTTCCEEEEEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE---TTEEEE--ECGGG
T ss_pred HCCcHHHHHHCCCEEEEEEecCCccccccCHHHHHHHHhcccceeEEEEEcCCCCcccceEEEE---CCeEEE--EEecc
Confidence 9999999999999999999999999999999999999999999999999985 89999999986 999887 99999
Q ss_pred ccHHHHhcCCCCCCCCCCCCCCCCccceeeEEEehhhhHHHHhhccCccccccCCc---ccCCCCCcc----cCchhHhH
Q 006923 353 LDPLLRATGFPDGDVNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPK---YKDASKTSF----KSSTRLEC 425 (625)
Q Consensus 353 l~~~l~~~~~~~g~l~~~~gf~~f~gNinn~~~~l~~l~~~l~~~~~~lp~~vnpK---~~d~~~~~~----~~~~rLE~ 425 (625)
+++.++....++|++. +.+||||||||++++|+++++.....||.|+|+| |.|.+++.. .+++|||+
T Consensus 307 l~~~~~~~~~~~g~l~------f~~~Ni~~~~fsl~fl~~~~~~~~~~l~~hva~Kki~~~d~~~~~~~p~~~n~iklE~ 380 (501)
T d1jv1a_ 307 ISLATAQKRSSDGRLL------FNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEK 380 (501)
T ss_dssp SCHHHHHCBCTTSSBS------SCEEEEEEEEEEHHHHHHHHHTTGGGCCCEEEEECCCEECTTSCEECCSSCCEEEEEC
T ss_pred CCHHHHhhccCCCccc------ccccceeheeeEHHHHHHHHHhcccCCCceEeccccCccCCCCCcccCCCCcchhHHH
Confidence 9999999988888765 4588999999999999999987777899999998 667655432 23579999
Q ss_pred hhccccccCCCCCceeEEEeeccceeecccCCCcccccCCCCCCCCChhhHHHHHHHHHHHHHHHcCCcccCCccccc--
Q 006923 426 MMQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYCANSLILRKAGAQVDDPVQEVF-- 503 (625)
Q Consensus 426 ~m~D~~~~f~~~~~~g~~~v~R~~~FsPvKN~~~~~~~~~~g~~~dsp~t~~~dl~~~~~~~L~~~G~~v~~~~~~~~-- 503 (625)
||||++.++ .++++++|+|++||+||||+++.. +.|||+||+.++|++|++||+++|+.+.+.....+
T Consensus 381 fifD~~~~~---~~~~~~~V~R~~eFaPvKN~~~~~-------~~dsp~ta~~~l~~~~~~wl~~aG~~~~~~~~~~~~~ 450 (501)
T d1jv1a_ 381 FVFDIFQFA---KKFVVYEVLREDEFSPLKNADSQN-------GKDNPTTARHALMSLHHCWVLNAGGHFIDENGSRLPA 450 (501)
T ss_dssp CGGGGGGGC---SSEEEEEECHHHHCCBCCSCTTSS-------SSSSHHHHHHHHHHHHHHHHHHTTCEEBCTTCCBCCS
T ss_pred HHHHHHHhc---cceEEEEEchhhccccccCCCCCC-------CCCCHHHHHHHHHHHhHHHHHHcCCeEeccccccccc
Confidence 999986665 577899999999999999998752 37999999999999999999999998854321111
Q ss_pred ---------CCeeecCCCeEEEcCCCCCCHHHH
Q 006923 504 ---------NGQEVEVWPRLTWKPKWGLTFSEI 527 (625)
Q Consensus 504 ---------~g~~~~~~P~i~l~p~~~~~~~~~ 527 (625)
....++++|+++|. |+.++.+
T Consensus 451 ~~~~~~~~~~~~~~EIsp~~sy~---GEgL~~~ 480 (501)
T d1jv1a_ 451 IPRLKDANDVPIQCEISPLISYA---GEGLESY 480 (501)
T ss_dssp SCCCCSTTCCCCCEEECTTTCSS---SCSCHHH
T ss_pred ccccccccCCCceEEECCccccc---ccCHHHh
Confidence 11245677777777 7777765
|
| >d2icya1 b.81.1.4 (A:384-466) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
| >d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]} | Back information, alignment and structure |
|---|
| >d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|