Citrus Sinensis ID: 006938
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 625 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LMG7 | 656 | Probable inactive purple | yes | no | 0.881 | 0.839 | 0.633 | 0.0 | |
| Q9ZQ81 | 651 | Probable inactive purple | no | no | 0.865 | 0.831 | 0.598 | 0.0 | |
| Q5MAU8 | 611 | Probable inactive purple | no | no | 0.588 | 0.602 | 0.334 | 5e-50 | |
| Q9LMX4 | 613 | Probable inactive purple | no | no | 0.592 | 0.603 | 0.349 | 5e-50 | |
| Q8H1R2 | 615 | Probable inactive purple | no | no | 0.579 | 0.588 | 0.321 | 5e-48 | |
| Q687E1 | 368 | Nucleotide pyrophosphatas | N/A | no | 0.459 | 0.779 | 0.308 | 3e-32 | |
| Q9LXI7 | 427 | Probable purple acid phos | no | no | 0.462 | 0.676 | 0.32 | 3e-27 | |
| A5D6U8 | 443 | Iron/zinc purple acid pho | yes | no | 0.500 | 0.706 | 0.279 | 6e-26 | |
| Q6ZNF0 | 438 | Iron/zinc purple acid pho | yes | no | 0.497 | 0.710 | 0.277 | 7e-26 | |
| Q8S340 | 434 | Purple acid phosphatase 2 | no | no | 0.518 | 0.746 | 0.284 | 7e-25 |
| >sp|Q9LMG7|PPA2_ARATH Probable inactive purple acid phosphatase 2 OS=Arabidopsis thaliana GN=PAP2 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/578 (63%), Positives = 433/578 (74%), Gaps = 27/578 (4%)
Query: 61 LPLGRLRNQ--------------PQEARPRSQPSPRHGPLVGQCRVCRVRDGTG-PRAGA 105
LPL LR+ P+ P P L+ + G G P
Sbjct: 90 LPLTNLRSNYTFRIFRWSESEIDPKHKDHDQNPLPGTKHLLAESEQLTFGSGVGMPEQIH 149
Query: 106 LGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGW 165
L FT + MRVMF+A DGE+R+V+YGE KD +G+ A A RYER MCD PANS+IGW
Sbjct: 150 LSFTNMVNTMRVMFVAGDGEERFVRYGESKDLLGNSAAARGMRYEREHMCDSPANSTIGW 209
Query: 166 RDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATP 225
RDPGWIFD V+K L GVRYYY+VGSDSKGWSE HS+++R+ + ET+AF+FGDMG ATP
Sbjct: 210 RDPGWIFDTVMKNLNDGVRYYYQVGSDSKGWSEIHSYIARDVTAEETVAFMFGDMGCATP 269
Query: 226 YTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS 285
YTTF RTQDESIST+KWILRDIEALGDKPA +SHIGDISYARGYSW+WDEFFA +EP+AS
Sbjct: 270 YTTFIRTQDESISTVKWILRDIEALGDKPAMISHIGDISYARGYSWVWDEFFAQVEPIAS 329
Query: 286 RVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAP 345
V YHVCIGNHEYD+ QPWKPDW+ ++YG DGGGECGVPYSLKF+MPGNS E TG +AP
Sbjct: 330 TVPYHVCIGNHEYDFSTQPWKPDWAASIYGNDGGGECGVPYSLKFNMPGNSSESTGMKAP 389
Query: 346 ATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYT 405
TRNLYYS+DMG VHFVYISTETNFL+G +QY FIK DLESVDRKKTPFVVVQGHRPMYT
Sbjct: 390 PTRNLYYSYDMGTVHFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPMYT 449
Query: 406 TSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSE 465
TSNE RD +R +M+EHLEPLFV+NNVTLALWGHVHRYERFCP++N TCG+ +
Sbjct: 450 TSNEVRDTMIRQKMVEHLEPLFVKNNVTLALWGHVHRYERFCPISNNTCGTQW------Q 503
Query: 466 AFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSY 525
PVH+VIGMAGQDWQPIWQPRP+HPD P+FPQP +S+YR GEFGYTRLVA KEKLT+S+
Sbjct: 504 GNPVHLVIGMAGQDWQPIWQPRPNHPDLPIFPQPEQSMYRTGEFGYTRLVANKEKLTVSF 563
Query: 526 VGNHDGEVHDMVEILASGQVLSGDVTASVKESETTSGSGSGSGSGPRGELTKSTFSWFVQ 585
VGNHDGEVHD VE+LASG V+SG KES + S ++S W+ +
Sbjct: 564 VGNHDGEVHDTVEMLASGVVISGS-----KESTKIPNLKTVPASATLMGKSESNALWYAK 618
Query: 586 GASILVLGAFVGYVIGYISHTKKAATSGRSWTPVKTNE 623
GA ++V+G +G++IG+ + KK++ SG W PVK E
Sbjct: 619 GAGLMVVGVLLGFIIGFFTRGKKSS-SGNRWIPVKNEE 655
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9ZQ81|PPA9_ARATH Probable inactive purple acid phosphatase 9 OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/585 (59%), Positives = 425/585 (72%), Gaps = 44/585 (7%)
Query: 61 LPLGRLRNQ---------PQEARPRSQ-------PSPRHGPLVGQCRVCRVRDGTG-PRA 103
LPL LR+ E P+ Q P RH L+ + R P
Sbjct: 88 LPLTNLRSNYTFRIFHWTQSEINPKHQDHDHNPLPGTRH--LLTESNQLNFRFAVNRPEQ 145
Query: 104 GALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSI 163
L +T++ +EMRV+F+ DGE+R +YGE KD++ ++AVA RYE MC PANS++
Sbjct: 146 IHLSYTDNINEMRVVFVTGDGEEREARYGEVKDKLDNIAVARGVRYEIEHMCHAPANSTV 205
Query: 164 GWRDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAA 223
GWRDPGW FDAV+K LK+G+RYYY+VGSD KGWSE HSFVSRNE S ET+AF+FGDMG
Sbjct: 206 GWRDPGWTFDAVMKNLKQGIRYYYQVGSDLKGWSEIHSFVSRNEGSEETLAFMFGDMGCY 265
Query: 224 TPYTTFERTQDESISTMKWILRDIEALG-DKPAFVSHIGDISYARGYSWLWDEFFALIEP 282
TPYTTF R ++ES+ST+KWILRDIEALG DKP VSHIGDISYARGYSW+WDEFF IEP
Sbjct: 266 TPYTTFIRGEEESLSTVKWILRDIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEP 325
Query: 283 VASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTG- 341
+AS+V YHVCIGNHEYDWP QPWKPDW+ VYG D GGECGVPYS+KF+MPGNS E TG
Sbjct: 326 IASKVPYHVCIGNHEYDWPNQPWKPDWAAYVYGKDSGGECGVPYSVKFNMPGNSTEATGM 385
Query: 342 TRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHR 401
+ P +RNLYYS+DMG VHFVYISTET+FL+G QY+F+K DLESV+R KTPFVVVQGHR
Sbjct: 386 VKGPQSRNLYYSYDMGSVHFVYISTETDFLKGGKQYSFLKSDLESVNRSKTPFVVVQGHR 445
Query: 402 PMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDG 461
PMYTTS + RDA +R +M+EHLEPL V+NNVT+ALWGHVHRYERFC ++N TC G
Sbjct: 446 PMYTTSRKIRDAAIREKMIEHLEPLLVKNNVTVALWGHVHRYERFCAISNNTC------G 499
Query: 462 EPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKL 521
E + PVH+VIGMAG+D QP+W+PR +H D P+FPQP S+YRGGEFGY RLVA KE+L
Sbjct: 500 ERWQGNPVHLVIGMAGKDSQPMWEPRANHEDVPIFPQPANSMYRGGEFGYIRLVANKERL 559
Query: 522 TLSYVGNHDGEVHDMVEILASGQVLSGDVTASVKESETTSGSGSGSGSGPRGELTKSTFS 581
TLSYVGNHDGEVHD+VEILASG+V+ SGS G+ G +
Sbjct: 560 TLSYVGNHDGEVHDVVEILASGEVI--------------SGSDDGTKDSNFGSESDFAVL 605
Query: 582 WFVQGASILVLGAFVGYVIGYISHTKKAA---TSGRSWTPVKTNE 623
W+++GAS++V+G GY +G++S KK + +S RSW VK E
Sbjct: 606 WYIEGASVMVVGVIFGYFVGFLSRKKKESGVGSSNRSWIQVKNEE 650
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q5MAU8|PPA27_ARATH Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 209/427 (48%), Gaps = 59/427 (13%)
Query: 149 YERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVS 204
+ R MC PA + +GWRDPG+I A +K L ++Y Y++G + S WS+ +F S
Sbjct: 218 FTRNSMCGAPART-VGWRDPGFIHTASLKDLWPNLKYTYRMGHELMNGSIVWSKNFTFKS 276
Query: 205 R---NEDSNETIAFLFGDMGAATP--YTTFERTQDESISTMKWILRDIEALGDKPAFVSH 259
+DS + + +FGDMG + Q S++T +++D++ + V H
Sbjct: 277 SPYPGQDSLQRV-IIFGDMGKGERDGSNEYNDYQPGSLNTTDQLIKDLKNID----IVFH 331
Query: 260 IGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGG 319
IGDI+YA GY WD+F A +EP+AS V Y V GNHE DW PD G D G
Sbjct: 332 IGDITYANGYISQWDQFTAQVEPIASTVPYMVASGNHERDW------PDSGSFYGGKDSG 385
Query: 320 GECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNF 379
GECGVP F P A +YS D G+ F TE ++ +GS QY F
Sbjct: 386 GECGVPAETMFDFP----------AENKAKFWYSADYGMFRFCVADTEHDWREGSEQYQF 435
Query: 380 IKHDLESVDRKKTPFVVVQGHRPMYTTSNE--NRDAPLRNRM-LEHLEPLFVENNVTLAL 436
I+ L SVDR+ P+++ HR + ++N+ ++ M E L+ L+ + V +A
Sbjct: 436 IERCLASVDRRAQPWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQKLWQKYKVDIAF 495
Query: 437 WGHVHRYERFCPLNNFTCGSMGMDGEPSE---AFP--VHIVIGMAGQDWQPIWQPRPDHP 491
+GHVH YER CP+ C MD E S AF +H+V+G AG H
Sbjct: 496 YGHVHNYERTCPIYQNQC----MDNEKSHYSGAFKGTIHVVVGGAGS-----------HL 540
Query: 492 DDPVFPQPMRSLYRGGEFGYTRLVA-TKEKLTLSYVGNHDGEVHDMVEILASGQVLSGDV 550
+P S++R ++G+ +L A L Y + +G VHD I + DV
Sbjct: 541 SSFSSLKPKWSIFRDYDYGFVKLTAFDHSSLLFEYKKSSNGAVHDSFTIFREYR----DV 596
Query: 551 TASVKES 557
A V++S
Sbjct: 597 LACVRDS 603
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LMX4|PPA1_ARATH Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 219/446 (49%), Gaps = 76/446 (17%)
Query: 120 LAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGL 179
LAE + VK GE+K ++ A + R MC PA + +GWRDPG+I A +K L
Sbjct: 196 LAEPVVEWGVKGGERK-----LSPAGTLTFARNSMCGAPART-VGWRDPGYIHTAFLKEL 249
Query: 180 KKGVRYYYKVGSD-SKG---WSETHSFVSR---NEDSNETIAFLFGDMGAA-----TPYT 227
+Y Y+VG S G WS+ + F S ++S + + +FGDMG A + Y
Sbjct: 250 WPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPGQNSVQQVV-IFGDMGKAEVDGSSEYN 308
Query: 228 TFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV 287
F+R S++T K +++D++ K V HIGDI YA GY WD+F A IEP+AS V
Sbjct: 309 DFQRA---SLNTTKQLIKDLK----KTDAVFHIGDICYANGYLSQWDQFIAQIEPIASTV 361
Query: 288 AYHVCIGNHEYDWPLQPWKPDWSYTVY-GTDGGGECGVPYSLKFHMPGNSLEPTGTRAPA 346
Y + GNHE WP S + Y G D GGECGVP F++P + RA
Sbjct: 362 PYMIASGNHERVWPN-------SGSFYEGLDSGGECGVPAETMFYVPAQN------RA-- 406
Query: 347 TRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPM--- 403
++YS D G+ F TE ++ +G+ QYNFI+H L SVDR+K P+++ HR +
Sbjct: 407 --KVWYSSDYGMFRFCVADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYS 464
Query: 404 --YTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDG 461
Y + E A R E L+ L+ + V +A++GH H YER CP+ C S
Sbjct: 465 STYFYAEEGSFAEPMGR--ESLQKLWQKYKVDIAIYGHAHNYERTCPVYQSVCTSHEKSN 522
Query: 462 EPSEAF-PVHIVIGMAG------QDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRL 514
+ +HIV G G D QP W SL+R ++G+ +L
Sbjct: 523 YKAPLNGTIHIVAGGGGAGLAEFSDLQPNW-----------------SLFRDYDYGFLKL 565
Query: 515 VATK-EKLTLSYVGNHDGEVHDMVEI 539
A L Y + DG VHD I
Sbjct: 566 TAIDHSNLLFEYKKSSDGRVHDSFTI 591
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8H1R2|PPA24_ARATH Probable inactive purple acid phosphatase 24 OS=Arabidopsis thaliana GN=PAP24 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/411 (32%), Positives = 199/411 (48%), Gaps = 49/411 (11%)
Query: 144 ASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSD----SKGWSET 199
A + R MC PA +GWRDPG+ + +K L Y Y++G D S WS+
Sbjct: 217 AGTLTFNRNSMCGNPARG-VGWRDPGFFHTSFLKELWPNREYIYRLGHDLVNGSTIWSKN 275
Query: 200 HSFVSR---NEDSNETIAFLFGDMGAA--TPYTTFERTQDESISTMKWILRDIEALGDKP 254
++FVS +DS + + +FGDMG + Q S++T +++D++ +
Sbjct: 276 YTFVSSPYPGQDSKQRV-IIFGDMGKGERDGSNEYNDYQPGSLNTTDQVIKDLKDID--- 331
Query: 255 AFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVY 314
V HIGD++Y+ GY WD+F A ++P+AS V Y + GNHE DW PD
Sbjct: 332 -IVFHIGDLTYSNGYLSQWDQFTAQVQPIASTVPYMIASGNHERDW------PDTGSFYA 384
Query: 315 GTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGS 374
GTD GGECGVP F+ P A +Y D G+ F +E ++ +G+
Sbjct: 385 GTDSGGECGVPAETMFYFP----------AENRAKFWYKTDYGMFRFCVADSEHDWREGT 434
Query: 375 NQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNE--NRDAPLRNRM-LEHLEPLFVENN 431
QY FI++ L +VDRK P+++ HR + ++N+ ++ M E L+ L+ +
Sbjct: 435 EQYKFIENCLATVDRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESLQKLWQKYK 494
Query: 432 VTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFP--VHIVIGMAGQDWQPIWQPRPD 489
V LA +GHVH YER CP+ C + D S F +H+V+G AG P
Sbjct: 495 VDLAFYGHVHNYERTCPIYESQCVNNDKD-HYSGTFKGTIHVVVGGAGSHLSPFSS---- 549
Query: 490 HPDDPVFPQPMRSLYRGGEFGYTRLVATK-EKLTLSYVGNHDGEVHDMVEI 539
P SL R +FG+ +L A+ L Y + G+V+D I
Sbjct: 550 -------LVPKWSLVRDYDFGFVKLTASDHSSLLFEYKKSSTGQVYDSFNI 593
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q687E1|NPP_HORVU Nucleotide pyrophosphatase/phosphodiesterase (Fragments) OS=Hordeum vulgare GN=npp PE=1 SV=2 | Back alignment and function description |
|---|
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 153/337 (45%), Gaps = 50/337 (14%)
Query: 216 LFGDMGAA--TPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLW 273
+FGDMG A F Q S++T ++ D+ D V HIGD+ YA GY W
Sbjct: 47 VFGDMGKAERDGSNEFANYQPGSLNTTDRLIEDL----DNYDIVFHIGDMPYANGYLSQW 102
Query: 274 DEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMP 333
D+F A + P++++ Y V GNHE DWP D D GGECGVP ++ P
Sbjct: 103 DQFTAQVAPISAKKPYMVASGNHERDWPNTGGFFD------VKDSGGECGVPAETMYYYP 156
Query: 334 GNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTP 393
A N +Y D G+ F +E ++ +G+ QY FI+ L +VDRK P
Sbjct: 157 ----------AENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTVDRKHQP 206
Query: 394 FVVVQGHRPMYTTSNE---NRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLN 450
+++ HR + +SN ++ + E L+ L+ V +A +GHVH YER CPL
Sbjct: 207 WLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERTCPLY 266
Query: 451 NFTC-------GSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSL 503
C S M+G + +V G G H P S+
Sbjct: 267 QSQCVNADKTHYSGTMNG------TIFVVAGGGGS-----------HLSSYTTAIPKWSI 309
Query: 504 YRGGEFGYTRLVA-TKEKLTLSYVGNHDGEVHDMVEI 539
+R ++G+T+L A L Y+ + DG+V+D I
Sbjct: 310 FRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTI 346
|
Hydrolyzes pyrophosphate, phosphodiester and phosphosulfate linkages of nucleotide-sugars, sulfonucleotides and nucleoside di and triphosphates. Highest activity observed with the substrates ADP-glucose and adenosine 5'-phosphosulfate. Hordeum vulgare (taxid: 4513) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9LXI7|PPA20_ARATH Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 162/350 (46%), Gaps = 61/350 (17%)
Query: 169 GWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAF-LFGDMGAATPYT 227
G I D VI LK YYYK G G S T F R S I F + GD+G +
Sbjct: 100 GQINDVVIGPLKPNTVYYYKCG----GPSSTQEFSFRTPPSKFPIKFAVSGDLGTSE--- 152
Query: 228 TFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV 287
+ ++ E +S KW D F+ GD+SYA Y LWD F L++P+AS+
Sbjct: 153 -WSKSTLEHVS--KW---------DYDVFILP-GDLSYANMYQPLWDTFGRLVQPLASQR 199
Query: 288 AYHVCIGNHEYD-WPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPA 346
+ V GNHE + P+ P +T Y ++ MP E +G+ +
Sbjct: 200 PWMVTHGNHELEKIPILHSNP---FTAYNK------------RWRMP---FEESGSSS-- 239
Query: 347 TRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTT 406
NLYYSF++ VH + + + T+F GS QY +++++L+ +DRK TP+VV H P Y +
Sbjct: 240 --NLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNS 297
Query: 407 SNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEA 466
+ ++ M E +E L + V L GHVH YERF + G
Sbjct: 298 NEAHQGEKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCG-------- 349
Query: 467 FPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVA 516
PV+I IG G + + + D P P SL+R FG+ +LV
Sbjct: 350 -PVYINIGDGG-NLEGLATKYRD-------PNPEISLFREASFGHGQLVV 390
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|A5D6U8|PAPL_DANRE Iron/zinc purple acid phosphatase-like protein OS=Danio rerio GN=papl PE=2 SV=1 | Back alignment and function description |
|---|
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 169/401 (42%), Gaps = 88/401 (21%)
Query: 170 WIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAF-LFGDMGAATPYTT 228
+I ++ L+ Y Y GS + GWSE F + NE + F LFGD+G P +
Sbjct: 91 YIHRVLLTDLRPAASYVYHCGSGA-GWSELFFFTALNESVFFSPGFALFGDLGNENPQSL 149
Query: 229 FERTQDESISTMKWILRDIEALGDKPAFVSHIGDISY--ARGYSWLWDEFFALIEPVASR 286
++ I T IL HIGD +Y + DEF I+ +A+
Sbjct: 150 SRLQKETQIGTYDVIL--------------HIGDFAYDLYEDNGRIGDEFMKQIQSIAAY 195
Query: 287 VAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPA 346
V Y C GNHE W++ Y +F MPG+
Sbjct: 196 VPYMTCPGNHE-----------WAFNF----------SQYRARFSMPGD----------- 223
Query: 347 TRNLYYSFDMGVVHFVYISTETNFLQGS-------NQYNFIKHDLESVDRKKT----PFV 395
T L+YS+++G H + STE F QY +++ DL+ +R + P++
Sbjct: 224 TEGLWYSWNVGPAHIISFSTEVYFYYLEYGLDLLFRQYEWLRADLQEANRPENRAERPWI 283
Query: 396 VVQGHRPMYTTSNENRDAPLRNRMLE-----------HLEPLFVENNVTLALWGHVHRYE 444
+ GHRPMY +++++ D + LE LF + V L LW H H YE
Sbjct: 284 ITMGHRPMYCSNDDDDDCTHFQSYVRLGRNDTKPPAPGLEELFYQYGVDLELWAHEHTYE 343
Query: 445 RFCPLNNFTCGSMGMDGEP--SEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMR- 501
R P+ ++ + G EP + PVHI+ G AG R H D P+P
Sbjct: 344 RLWPVYDYKVFN-GSSEEPYVNPKAPVHIITGSAG--------CREKH--DGFIPKPRDW 392
Query: 502 SLYRGGEFGYTRL-VATKEKLTLSYVGNHD-GEVHDMVEIL 540
S +R ++GYTRL + L L V + G+V D + ++
Sbjct: 393 SAFRSTDYGYTRLQLINNTHLYLEQVSDDQYGKVIDQMTLV 433
|
Danio rerio (taxid: 7955) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q6ZNF0|PAPL_HUMAN Iron/zinc purple acid phosphatase-like protein OS=Homo sapiens GN=PAPL PE=2 SV=2 | Back alignment and function description |
|---|
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 171/397 (43%), Gaps = 86/397 (21%)
Query: 170 WIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAF-LFGDMGAATPYTT 228
+I ++ L GV+Y Y+ GS ++GWS F + ++ + +FGD+GA P
Sbjct: 92 YIHRVTLRKLLPGVQYVYRCGS-AQGWSRRFRFRALKNGAHWSPRLAVFGDLGADNPKAV 150
Query: 229 FERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYA--RGYSWLWDEFFALIEPVASR 286
+D +L H+GD +Y + + + D F LIEPVA+
Sbjct: 151 PRLRRDTQQGMYDAVL--------------HVGDFAYNLDQDNARVGDRFMRLIEPVAAS 196
Query: 287 VAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPA 346
+ Y C GNHE + +K +F MPG++
Sbjct: 197 LPYMTCPGNHEERYNFSNYKA---------------------RFSMPGDN---------- 225
Query: 347 TRNLYYSFDMGVVHFVYISTETNFLQG------SNQYNFIKHDLESVDRKKT--PFVVVQ 398
L+YS+D+G H + STE F Q+ +++ DL+ ++ + P+++
Sbjct: 226 -EGLWYSWDLGPAHIISFSTEVYFFLHYGRHLVQRQFRWLESDLQKANKNRAARPWIITM 284
Query: 399 GHRPMYTTSNENRDAPLRNR---------MLEHLEPLFVENNVTLALWGHVHRYERFCPL 449
GHRPMY SN + D R+ L LE LF + V L LW H H YER P+
Sbjct: 285 GHRPMYC-SNADLDDCTRHESKVRKGLQGKLYGLEDLFYKYGVDLQLWAHEHSYERLWPI 343
Query: 450 NNFTC--GSMGMDGEPSEAFPVHIVIGMAG--QDWQPIWQPRPDHPDDPVFPQPMRSLYR 505
N+ GS M PVHI+ G AG + P VFP+P ++ R
Sbjct: 344 YNYQVFNGSREMPYTNPRG-PVHIITGSAGCEERLTPF----------AVFPRPWSAV-R 391
Query: 506 GGEFGYTRL-VATKEKLTLSYVG-NHDGEVHDMVEIL 540
E+GYTRL + + + V + DG++ D V ++
Sbjct: 392 VKEYGYTRLHILNGTHIHIQQVSDDQDGKIVDDVWVV 428
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8S340|PPA22_ARATH Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 174/404 (43%), Gaps = 80/404 (19%)
Query: 115 MRVMFLAEDGE-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173
MRV F+ ED + + V+YG++ + A Y+ + G I
Sbjct: 60 MRVTFITEDNKVESVVEYGKQPGKYDGKATGECTSYK------------YFFYKSGKIHH 107
Query: 174 AVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAF-LFGDMGAATPYTTFERT 232
I L+ YYY+ G + F + S + F + GD+G
Sbjct: 108 VKIGPLQANTTYYYRCGGNGP------EFSFKTPPSTFPVEFAIVGDLGQT--------- 152
Query: 233 QDESISTMKWILRDIEALGDKPAFVSHI-GDISYARGYSWLWDEFFALIEPVASRVAYHV 291
+W + + + V + GD+SYA + LWD F L+EP+AS+ + V
Sbjct: 153 --------EWTAATLSHINSQDYDVFLLPGDLSYADTHQPLWDSFGRLVEPLASKRPWMV 204
Query: 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLY 351
GNHE ++ P +T + + Y+ ++ MP T + +T NLY
Sbjct: 205 TEGNHEIEF-----FPIIEHTTFKS---------YNARWLMPH-------TESFSTSNLY 243
Query: 352 YSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENR 411
YSFD+ VH V + + T+F S+QY +++ DL VDRK TP+VVV H P Y T NE
Sbjct: 244 YSFDVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHAPWYNT-NEAH 302
Query: 412 DAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHI 471
+ + M E +E L V + GHVH YERF + N G P+HI
Sbjct: 303 EGEGES-MREAMESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCG---------PIHI 352
Query: 472 VIGMAG-QDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRL 514
IG G ++ + +P P P+ S +R FG+ RL
Sbjct: 353 TIGDGGNREGLALSFKKP--------PSPL-SEFRESSFGHGRL 387
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 625 | ||||||
| 449452086 | 660 | PREDICTED: probable inactive purple acid | 0.862 | 0.816 | 0.725 | 0.0 | |
| 449513543 | 660 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.862 | 0.816 | 0.725 | 0.0 | |
| 224112150 | 647 | predicted protein [Populus trichocarpa] | 0.857 | 0.828 | 0.708 | 0.0 | |
| 255542092 | 650 | Nucleotide pyrophosphatase/phosphodieste | 0.883 | 0.849 | 0.688 | 0.0 | |
| 225423497 | 652 | PREDICTED: probable inactive purple acid | 0.849 | 0.814 | 0.712 | 0.0 | |
| 359806519 | 662 | probable inactive purple acid phosphatas | 0.809 | 0.764 | 0.719 | 0.0 | |
| 15222978 | 656 | putative inactive purple acid phosphatas | 0.881 | 0.839 | 0.633 | 0.0 | |
| 297849796 | 657 | hypothetical protein ARALYDRAFT_888760 [ | 0.881 | 0.838 | 0.624 | 0.0 | |
| 56788347 | 656 | putative purple acid phosphatase [Arabid | 0.881 | 0.839 | 0.629 | 0.0 | |
| 147798406 | 632 | hypothetical protein VITISV_032086 [Viti | 0.817 | 0.808 | 0.673 | 0.0 |
| >gi|449452086|ref|XP_004143791.1| PREDICTED: probable inactive purple acid phosphatase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/546 (72%), Positives = 452/546 (82%), Gaps = 7/546 (1%)
Query: 78 QPSPRHGPLVGQCRVCRVRDGTGPRAGALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQ 137
P P L+ R G GP L FT+ EMRVMF+ +DG KRYV+YGEKK++
Sbjct: 120 NPLPGTAHLLAASDELRFAPGGGPEQIHLAFTDQDDEMRVMFVTKDGSKRYVRYGEKKEK 179
Query: 138 MGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWS 197
+ + VA VERYER MCD PAN SIGWRDPG+I DAV+ LKKG + YY+VGSDSKGWS
Sbjct: 180 LDQIVVAGVERYEREHMCDSPANDSIGWRDPGFIHDAVMNKLKKGAKVYYQVGSDSKGWS 239
Query: 198 ETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFV 257
+FVSRNEDS+ETIAFLFGDMGAATPYTTF RTQDESIST++WILRDIEALGDKPA V
Sbjct: 240 SILNFVSRNEDSDETIAFLFGDMGAATPYTTFVRTQDESISTVRWILRDIEALGDKPAMV 299
Query: 258 SHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTD 317
SHIGDISYARG+SWLWD FF +EPVAS+VAYHVCIGNHEYDWPLQPWKP+W+ +YG D
Sbjct: 300 SHIGDISYARGHSWLWDVFFNQVEPVASKVAYHVCIGNHEYDWPLQPWKPEWANGIYGKD 359
Query: 318 GGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQY 377
GGGECGVPYSLKF+MPGNS EPT + + TRNL+YSF+MG VHFVYISTETNFLQGS+QY
Sbjct: 360 GGGECGVPYSLKFNMPGNSTEPTESHSLPTRNLFYSFNMGSVHFVYISTETNFLQGSSQY 419
Query: 378 NFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALW 437
FIK DLESVDRKKTPF+VVQGHRPMYTTSNE RDAPLR +ML HLEPL V+NNVTLALW
Sbjct: 420 EFIKRDLESVDRKKTPFIVVQGHRPMYTTSNELRDAPLREKMLHHLEPLLVKNNVTLALW 479
Query: 438 GHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFP 497
GHVHRYERFCPLNN+TCGSMG+DGE EA PVH+VIGMAGQDWQPIW+PRP+HPDDP+FP
Sbjct: 480 GHVHRYERFCPLNNYTCGSMGLDGEDWEALPVHLVIGMAGQDWQPIWEPRPNHPDDPIFP 539
Query: 498 QPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASGQVLSGDVTASVKES 557
QP RS+YRGGEFGYTRLVATKEKLT+SYVGNHDGEVHD VEILASGQVL+G V A S
Sbjct: 540 QPKRSMYRGGEFGYTRLVATKEKLTISYVGNHDGEVHDSVEILASGQVLNGGVGAKFINS 599
Query: 558 ETTSGSGSGSGSGPRGELTKSTFSWFVQGASILVLGAFVGYVIGYISHTKKAATSGRSWT 617
+ + S +G+ + + +FSW+V G SILVLGAF+GY+IG++SH +K + S +WT
Sbjct: 600 -SIANSTTGNA------MLEFSFSWYVMGGSILVLGAFIGYIIGFVSHARKNSLSRNNWT 652
Query: 618 PVKTNE 623
PVKT E
Sbjct: 653 PVKTEE 658
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449513543|ref|XP_004164353.1| PREDICTED: LOW QUALITY PROTEIN: probable inactive purple acid phosphatase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/546 (72%), Positives = 451/546 (82%), Gaps = 7/546 (1%)
Query: 78 QPSPRHGPLVGQCRVCRVRDGTGPRAGALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQ 137
P P L+ R G GP L FT+ EMRVMF+ +DG KRYV+YGEKK++
Sbjct: 120 NPLPGTAHLLAASDELRFAPGGGPEQIHLAFTDQDDEMRVMFVTKDGSKRYVRYGEKKEK 179
Query: 138 MGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWS 197
+ + VA VERYER MCD PAN SIGWRDPG+I DAV+ LKKG + YY+VGSDSKGWS
Sbjct: 180 LDQIVVAGVERYEREHMCDSPANDSIGWRDPGFIHDAVMNKLKKGAKVYYQVGSDSKGWS 239
Query: 198 ETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFV 257
+FVSRNEDS+ETIAFLFGDMGAATPYTTF RTQDESIST++WILRDIEALGDKPA V
Sbjct: 240 SILNFVSRNEDSDETIAFLFGDMGAATPYTTFVRTQDESISTVRWILRDIEALGDKPAMV 299
Query: 258 SHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTD 317
SHIGDISYARG+SWLWD FF +EPVAS+VAYHVCIGNHEYDWPLQPWKP+W+ +YG D
Sbjct: 300 SHIGDISYARGHSWLWDVFFNQVEPVASKVAYHVCIGNHEYDWPLQPWKPEWANGIYGKD 359
Query: 318 GGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQY 377
GGGECGVPYSLKF+MPGNS EPT + + TRNL+YSF+MG VHFVYISTETNFLQGS+QY
Sbjct: 360 GGGECGVPYSLKFNMPGNSTEPTESHSLPTRNLFYSFNMGSVHFVYISTETNFLQGSSQY 419
Query: 378 NFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALW 437
FIK DLESVDRKKTPF+VVQGHRPMYTTSNE RDAPLR +ML HLEPL V+NNVTLALW
Sbjct: 420 EFIKRDLESVDRKKTPFIVVQGHRPMYTTSNELRDAPLREKMLHHLEPLLVKNNVTLALW 479
Query: 438 GHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFP 497
GHVHRYERFCPLNN+TCGSMG+DGE EA PVH+VIGMAGQDWQPIW+PRP+HPDDP+FP
Sbjct: 480 GHVHRYERFCPLNNYTCGSMGLDGEDWEALPVHLVIGMAGQDWQPIWEPRPNHPDDPIFP 539
Query: 498 QPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASGQVLSGDVTASVKES 557
QP RS+YRGGEFGYTRLVATKEKLT+SYVGNHDGEVHD VEILASGQVL+G V A S
Sbjct: 540 QPKRSMYRGGEFGYTRLVATKEKLTISYVGNHDGEVHDSVEILASGQVLNGGVGAKFINS 599
Query: 558 ETTSGSGSGSGSGPRGELTKSTFSWFVQGASILVLGAFVGYVIGYISHTKKAATSGRSWT 617
+T+ S +G+ + + +F W+V G SILVLGAF+GY+IG +SH +K + S +WT
Sbjct: 600 -STANSTTGNA------MLEFSFPWYVMGGSILVLGAFIGYIIGXVSHARKNSLSRNNWT 652
Query: 618 PVKTNE 623
PVKT E
Sbjct: 653 PVKTEE 658
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224112150|ref|XP_002316099.1| predicted protein [Populus trichocarpa] gi|222865139|gb|EEF02270.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/555 (70%), Positives = 443/555 (79%), Gaps = 19/555 (3%)
Query: 69 QPQEARPRSQPSPRHGPLVGQCRVCRVRDGTGPRAGALGFTEDASEMRVMFLAEDGEKRY 128
P+ P P + + V G GP L +T+D EMRVMF+ DGE+R
Sbjct: 111 NPKRHDHDHNPLPGTAHFLAESDVVGFESGHGPEQIHLAYTDDEDEMRVMFVVGDGEERG 170
Query: 129 VKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYK 188
VK+GE+ + HV+ A V RYER MCD PAN SIGWRDPGWI D V+K LKKGVRYYY+
Sbjct: 171 VKWGERDGEWSHVSGARVVRYEREDMCDAPANGSIGWRDPGWIHDGVMKDLKKGVRYYYQ 230
Query: 189 VGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIE 248
VGSDSKGWS T SFVSRN DS+ETIAFLFGDMG +TPY TF RTQDESISTMKWILRDIE
Sbjct: 231 VGSDSKGWSTTRSFVSRNGDSDETIAFLFGDMGTSTPYATFIRTQDESISTMKWILRDIE 290
Query: 249 ALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPD 308
A+GDK AFVSHIGDISYARGYSWLWD FF +EPVAS+V YHVCIGNHEYDWPLQPWKPD
Sbjct: 291 AIGDKHAFVSHIGDISYARGYSWLWDHFFTQVEPVASKVPYHVCIGNHEYDWPLQPWKPD 350
Query: 309 WSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET 368
W+ VYGTDGGGECGVPYSLKF+MPGNS + TGTRAPATRNLYYSFD G VHFVYISTET
Sbjct: 351 WANAVYGTDGGGECGVPYSLKFNMPGNSSDSTGTRAPATRNLYYSFDTGAVHFVYISTET 410
Query: 369 NFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFV 428
NF+ GS+QYNFIK DLESVDR KTPFVVVQGHRPMYTTSNENRDAP+RN+MLEHLEPLF
Sbjct: 411 NFVAGSSQYNFIKQDLESVDRSKTPFVVVQGHRPMYTTSNENRDAPMRNKMLEHLEPLFT 470
Query: 429 ENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRP 488
+ NVTLALWGHVHRYERFCP+NNF CGS + FPVH VIGMAGQDWQPIW+PR
Sbjct: 471 KYNVTLALWGHVHRYERFCPVNNFICGSTW------KGFPVHAVIGMAGQDWQPIWEPRS 524
Query: 489 DHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASGQVLSG 548
DHP+DP+FPQP RS++RGGEFGYT+LVATKEKLTL+YVGNHDG++HDMVE LASG+VLSG
Sbjct: 525 DHPNDPIFPQPARSMFRGGEFGYTKLVATKEKLTLTYVGNHDGKMHDMVEFLASGEVLSG 584
Query: 549 DVTASVKESETTSGSGSGSGSGPRGELTKSTFSWFVQGASILVLGAFVGYVIGYISHTKK 608
D + SV +G R + STFSW+V+GAS+LVLGAFVGY +GY SH++K
Sbjct: 585 DDSISVD-------------AGARIGVVDSTFSWYVKGASVLVLGAFVGYTLGYASHSRK 631
Query: 609 AATSGRSWTPVKTNE 623
+ SWTPVK+ +
Sbjct: 632 QNGNKASWTPVKSED 646
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542092|ref|XP_002512110.1| Nucleotide pyrophosphatase/phosphodiesterase, putative [Ricinus communis] gi|223549290|gb|EEF50779.1| Nucleotide pyrophosphatase/phosphodiesterase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/577 (68%), Positives = 450/577 (77%), Gaps = 25/577 (4%)
Query: 53 PLLVLLPDLPLGRLRNQPQEARPRSQ-----PSPRHGPLVGQCRVCRVRDGTGPRAGALG 107
P+ L + R E P+ P P L+ + G GP L
Sbjct: 88 PITNLRSNYSFRIFRWTESEINPKRHDHDHNPLPGTAHLLAESEEVGFELGNGPEQIHLA 147
Query: 108 FTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRD 167
FT+ EMRVMF+ D E+R VK+GE + HV VA V RYER MCD PAN SIGWRD
Sbjct: 148 FTDMEDEMRVMFVVGDKEEREVKWGEADGKWSHVTVARVVRYEREHMCDAPANGSIGWRD 207
Query: 168 PGWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATPYT 227
PGWI DAV+ LKKGVRYYY+VGSDS+GWS T SFVSRN DS+E IAFLFGDMG ATPY
Sbjct: 208 PGWIHDAVMDKLKKGVRYYYQVGSDSRGWSSTQSFVSRNGDSDEAIAFLFGDMGTATPYA 267
Query: 228 TFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV 287
TF RTQDESI+TMKWILRDIEA+GDKPAF+SHIGDISYARGYSWLWD FF IEPVAS V
Sbjct: 268 TFLRTQDESIATMKWILRDIEAIGDKPAFISHIGDISYARGYSWLWDHFFTQIEPVASEV 327
Query: 288 AYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPAT 347
YHVCIGNHEYDWPLQPWKPDWS ++YGTDGGGECGVPYSLKF+MPGNS E TG+ APAT
Sbjct: 328 PYHVCIGNHEYDWPLQPWKPDWSNSIYGTDGGGECGVPYSLKFNMPGNSSESTGSHAPAT 387
Query: 348 RNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTS 407
RNLYYSFDMG VHFVY+STETNFL GSNQYNF+KHDLESV+R KTPFV+VQGHRPMYTTS
Sbjct: 388 RNLYYSFDMGAVHFVYMSTETNFLPGSNQYNFLKHDLESVNRSKTPFVIVQGHRPMYTTS 447
Query: 408 NENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAF 467
+ENRDAPLR++MLEHLEPLFV+NNVTLALWGHVHRYERFCP+NNFTCGS + F
Sbjct: 448 HENRDAPLRDKMLEHLEPLFVKNNVTLALWGHVHRYERFCPVNNFTCGSTW------KGF 501
Query: 468 PVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVG 527
P+H+VIGMAGQDWQPIWQPR DHPDDP+FPQP +S+YRGGEFGYTRLVATK+KLT SYVG
Sbjct: 502 PIHVVIGMAGQDWQPIWQPRVDHPDDPIFPQPEQSMYRGGEFGYTRLVATKKKLTFSYVG 561
Query: 528 NHDGEVHDMVEILASGQVLSGDVTASVKESETTSGSGSGSGSGPRGE-LTKSTFSWFVQG 586
NHDGEVHDM+EILASGQV SG+ +G +G R E S FS +V+G
Sbjct: 562 NHDGEVHDMMEILASGQVYSGN-------------AGVNDVAGARIEAAADSKFSMYVKG 608
Query: 587 ASILVLGAFVGYVIGYISHTKKAATSGRSWTPVKTNE 623
AS+LVLGAF+GY++G+ISH +K +T+ SW+ VKT+E
Sbjct: 609 ASVLVLGAFMGYILGFISHARKHSTARGSWSAVKTDE 645
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225423497|ref|XP_002274401.1| PREDICTED: probable inactive purple acid phosphatase 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/546 (71%), Positives = 438/546 (80%), Gaps = 15/546 (2%)
Query: 78 QPSPRHGPLVGQCRVCRVRDGTGPRAGALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQ 137
P P LV + G GP L +T+ EMRVMF+ D R V+YG +D
Sbjct: 121 NPLPGTTHLVAESGEVGFGGGGGPEQIHLAYTDREDEMRVMFVTGDAGVRTVRYGLSRDA 180
Query: 138 MGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWS 197
M V A+V RYER MCD PAN S+GWRDPG+I DAV++ LKKG RYYYKVGSDS GWS
Sbjct: 181 MHRVVTAAVGRYEREDMCDSPANESVGWRDPGFIQDAVMRNLKKGKRYYYKVGSDSGGWS 240
Query: 198 ETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFV 257
H+F+SR+ DS +TIAFLFGDMG ATPY+TF RTQ+ES ST+KWILRDIEAL D PAF+
Sbjct: 241 AIHNFMSRDMDSEKTIAFLFGDMGTATPYSTFLRTQEESKSTVKWILRDIEALDDNPAFI 300
Query: 258 SHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTD 317
SHIGDISYARGYSWLWD FF +EP+ASR+ YHVCIGNHEYDWPLQPWKPDWS TVYGTD
Sbjct: 301 SHIGDISYARGYSWLWDNFFTQVEPIASRLPYHVCIGNHEYDWPLQPWKPDWSSTVYGTD 360
Query: 318 GGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQY 377
GGGECGVPYSLKF MPGNS E TGTRAPATRNL+YSFD VHFVYISTETNFL GS+QY
Sbjct: 361 GGGECGVPYSLKFKMPGNSSELTGTRAPATRNLFYSFDTKAVHFVYISTETNFLPGSSQY 420
Query: 378 NFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALW 437
+FIK DLESVDRKKTPFVVVQGHRPMYTTSNE RDAP+R RML++LEPLFV+NNVTLALW
Sbjct: 421 DFIKQDLESVDRKKTPFVVVQGHRPMYTTSNELRDAPVRERMLKYLEPLFVKNNVTLALW 480
Query: 438 GHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFP 497
GHVHRYERFCP+NNFTCG+MG++GE PVHIVIGMAGQDWQP W+PRPDHP DPV+P
Sbjct: 481 GHVHRYERFCPINNFTCGNMGLNGEYLGGLPVHIVIGMAGQDWQPTWEPRPDHPKDPVYP 540
Query: 498 QPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASGQVLSGDVTASVKES 557
QP SLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHD VEILASGQVLSG V E
Sbjct: 541 QPKWSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDTVEILASGQVLSG-----VGED 595
Query: 558 ETTSGSGSGSGSGPRGELTKSTFSWFVQGASILVLGAFVGYVIGYISHTKKAATSGRSWT 617
+ + PR E+ + TFSW+V+GASILVLGAF+GYVIG++SH ++ A ++WT
Sbjct: 596 D----------AQPRVEVAEYTFSWYVKGASILVLGAFMGYVIGFVSHARREAALRKNWT 645
Query: 618 PVKTNE 623
PVK +
Sbjct: 646 PVKIED 651
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359806519|ref|NP_001241258.1| probable inactive purple acid phosphatase 2-like precursor [Glycine max] gi|304421402|gb|ADM32500.1| purple acid phosphatases [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/524 (71%), Positives = 431/524 (82%), Gaps = 18/524 (3%)
Query: 103 AGALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSS 162
GA G ED MRVM++ D + YV+YGE++D++ +AVA VERYER MCD PAN+S
Sbjct: 153 VGAHGKEED---MRVMYITRDPRETYVRYGEREDKLDGIAVARVERYEREHMCDAPANTS 209
Query: 163 IGWRDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGA 222
+GWRDPG+I DAV+ GLKKG RYYYKVG+D+ GWS T SFVSRN DS+ETIAFLFGDMG
Sbjct: 210 VGWRDPGFIHDAVLIGLKKGQRYYYKVGNDNGGWSATQSFVSRNSDSDETIAFLFGDMGT 269
Query: 223 ATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEP 282
A PY TF RTQDESISTMKWILRD+EALGD PAFVSHIGDISYARGYSWLWD FFA IEP
Sbjct: 270 AVPYNTFLRTQDESISTMKWILRDVEALGDTPAFVSHIGDISYARGYSWLWDHFFAQIEP 329
Query: 283 VASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGT 342
VAS+VAYHVCIGNHEYDWPLQPWKPDW+ YG DGGGECGVPYSL+F+MPGNS E TG
Sbjct: 330 VASQVAYHVCIGNHEYDWPLQPWKPDWA--SYGKDGGGECGVPYSLRFNMPGNSSELTGN 387
Query: 343 -RAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHR 401
AP TRNLYYSFDMG VHFVYISTETNF+ GS QY+F+KHDLESV+R KTPFVVVQGHR
Sbjct: 388 AAAPPTRNLYYSFDMGAVHFVYISTETNFVPGSKQYDFLKHDLESVNRSKTPFVVVQGHR 447
Query: 402 PMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCG-SMGMD 460
PMYTTS+ENRDA LR +MLEHLEPL V NNVTLALWGHVHRYERFCPLNNFTCG + G +
Sbjct: 448 PMYTTSHENRDAALRGKMLEHLEPLLVNNNVTLALWGHVHRYERFCPLNNFTCGVNAGHN 507
Query: 461 GEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEK 520
+ + VHIVIGMAGQDWQP+W+PRPDHPDDP+FPQP SLYRGGEFGYTRLVATK+K
Sbjct: 508 AGDKKGYTVHIVIGMAGQDWQPVWEPRPDHPDDPIFPQPKWSLYRGGEFGYTRLVATKQK 567
Query: 521 LTLSYVGNHDGEVHDMVEILASGQVLSGDVTASVKESETTSGSGSGSGSGPRGELTKSTF 580
L LSYVGNHDGEVHD +EILASG+V+SGD S+ ++ + +G+ + +ST
Sbjct: 568 LVLSYVGNHDGEVHDQLEILASGEVVSGDGGCSIADANSKAGN----------VIVESTL 617
Query: 581 SWFVQGASILVLGAFVGYVIGYI-SHTKKAATSGRSWTPVKTNE 623
SW+V+G S+L+LGAF+GYV GY+ S KK+ +WTPVKT E
Sbjct: 618 SWYVKGGSVLLLGAFMGYVFGYVTSARKKSEVPESNWTPVKTEE 661
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15222978|ref|NP_172843.1| putative inactive purple acid phosphatase 2 [Arabidopsis thaliana] gi|75264030|sp|Q9LMG7.1|PPA2_ARATH RecName: Full=Probable inactive purple acid phosphatase 2; Flags: Precursor gi|8778406|gb|AAF79414.1|AC068197_24 F16A14.11 [Arabidopsis thaliana] gi|332190960|gb|AEE29081.1| putative inactive purple acid phosphatase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/578 (63%), Positives = 433/578 (74%), Gaps = 27/578 (4%)
Query: 61 LPLGRLRNQ--------------PQEARPRSQPSPRHGPLVGQCRVCRVRDGTG-PRAGA 105
LPL LR+ P+ P P L+ + G G P
Sbjct: 90 LPLTNLRSNYTFRIFRWSESEIDPKHKDHDQNPLPGTKHLLAESEQLTFGSGVGMPEQIH 149
Query: 106 LGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGW 165
L FT + MRVMF+A DGE+R+V+YGE KD +G+ A A RYER MCD PANS+IGW
Sbjct: 150 LSFTNMVNTMRVMFVAGDGEERFVRYGESKDLLGNSAAARGMRYEREHMCDSPANSTIGW 209
Query: 166 RDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATP 225
RDPGWIFD V+K L GVRYYY+VGSDSKGWSE HS+++R+ + ET+AF+FGDMG ATP
Sbjct: 210 RDPGWIFDTVMKNLNDGVRYYYQVGSDSKGWSEIHSYIARDVTAEETVAFMFGDMGCATP 269
Query: 226 YTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS 285
YTTF RTQDESIST+KWILRDIEALGDKPA +SHIGDISYARGYSW+WDEFFA +EP+AS
Sbjct: 270 YTTFIRTQDESISTVKWILRDIEALGDKPAMISHIGDISYARGYSWVWDEFFAQVEPIAS 329
Query: 286 RVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAP 345
V YHVCIGNHEYD+ QPWKPDW+ ++YG DGGGECGVPYSLKF+MPGNS E TG +AP
Sbjct: 330 TVPYHVCIGNHEYDFSTQPWKPDWAASIYGNDGGGECGVPYSLKFNMPGNSSESTGMKAP 389
Query: 346 ATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYT 405
TRNLYYS+DMG VHFVYISTETNFL+G +QY FIK DLESVDRKKTPFVVVQGHRPMYT
Sbjct: 390 PTRNLYYSYDMGTVHFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPMYT 449
Query: 406 TSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSE 465
TSNE RD +R +M+EHLEPLFV+NNVTLALWGHVHRYERFCP++N TCG+ +
Sbjct: 450 TSNEVRDTMIRQKMVEHLEPLFVKNNVTLALWGHVHRYERFCPISNNTCGTQW------Q 503
Query: 466 AFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSY 525
PVH+VIGMAGQDWQPIWQPRP+HPD P+FPQP +S+YR GEFGYTRLVA KEKLT+S+
Sbjct: 504 GNPVHLVIGMAGQDWQPIWQPRPNHPDLPIFPQPEQSMYRTGEFGYTRLVANKEKLTVSF 563
Query: 526 VGNHDGEVHDMVEILASGQVLSGDVTASVKESETTSGSGSGSGSGPRGELTKSTFSWFVQ 585
VGNHDGEVHD VE+LASG V+SG KES + S ++S W+ +
Sbjct: 564 VGNHDGEVHDTVEMLASGVVISGS-----KESTKIPNLKTVPASATLMGKSESNALWYAK 618
Query: 586 GASILVLGAFVGYVIGYISHTKKAATSGRSWTPVKTNE 623
GA ++V+G +G++IG+ + KK++ SG W PVK E
Sbjct: 619 GAGLMVVGVLLGFIIGFFTRGKKSS-SGNRWIPVKNEE 655
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297849796|ref|XP_002892779.1| hypothetical protein ARALYDRAFT_888760 [Arabidopsis lyrata subsp. lyrata] gi|297338621|gb|EFH69038.1| hypothetical protein ARALYDRAFT_888760 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/578 (62%), Positives = 435/578 (75%), Gaps = 27/578 (4%)
Query: 61 LPLGRLRNQ--------------PQEARPRSQPSPRHGPLVGQCRVCRVRDGTG-PRAGA 105
LPL LR+ P+ P P L+ + G G P
Sbjct: 91 LPLTNLRSNYTFRIFRWSESEIDPKHKDHDQNPLPGTKHLLAESEQLSFGSGVGMPEQIH 150
Query: 106 LGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGW 165
L +T + MRVMF+A DGE+R+V+YGE KD +G+ A A RYER MC+ PANS+IGW
Sbjct: 151 LSYTNMVNTMRVMFVAGDGEERFVRYGESKDLLGNSAAARGMRYEREHMCNSPANSTIGW 210
Query: 166 RDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATP 225
RDPGWIFD V+K L GVRYYY+VGSDSKGWSE HS+++R+ + ET+AF+FGDMG AT
Sbjct: 211 RDPGWIFDTVMKNLNDGVRYYYQVGSDSKGWSEIHSYIARDVTAEETVAFMFGDMGCATA 270
Query: 226 YTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS 285
YTTF R+QDESIST+KWILRDIEALGDKPA +SHIGDISYARGYSW+WDEFFA +EP+AS
Sbjct: 271 YTTFIRSQDESISTVKWILRDIEALGDKPALISHIGDISYARGYSWVWDEFFAQVEPIAS 330
Query: 286 RVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAP 345
+V YHVCIGNHEYD+P QPWKPDW+ ++YG DGGGECGVPYSLKF+MPGNS E TG +AP
Sbjct: 331 KVPYHVCIGNHEYDFPTQPWKPDWAASIYGNDGGGECGVPYSLKFNMPGNSSESTGMKAP 390
Query: 346 ATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYT 405
TRNLYYS+D G VHF+YISTETNFL+G +QY FIK DLESV+RKKTPFVVVQGHRPMYT
Sbjct: 391 PTRNLYYSYDTGSVHFIYISTETNFLKGGSQYEFIKRDLESVNRKKTPFVVVQGHRPMYT 450
Query: 406 TSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSE 465
TSNE RD +R +M+EHLEPLFV NNVTLALWGHVHRYERFCP++N TCG +
Sbjct: 451 TSNEVRDTMIRQKMVEHLEPLFVNNNVTLALWGHVHRYERFCPISNNTCGKQW------Q 504
Query: 466 AFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSY 525
PVH+VIGMAGQDWQPIWQPRP+HPD P+FPQP +S+YR GEFGYTRLVA KEKLT+S+
Sbjct: 505 GNPVHLVIGMAGQDWQPIWQPRPNHPDLPIFPQPEQSMYRTGEFGYTRLVANKEKLTVSF 564
Query: 526 VGNHDGEVHDMVEILASGQVLSGDVTASVKESETTSGSGSGSGSGPRGELTKSTFSWFVQ 585
VGNHDGEVHD VE+LASG+V+SG+ KES + S ++S W+V+
Sbjct: 565 VGNHDGEVHDTVEMLASGEVISGN-----KESTKIPNLKTVPASATLMGKSESNALWYVK 619
Query: 586 GASILVLGAFVGYVIGYISHTKKAATSGRSWTPVKTNE 623
GA ++V+G +G++IG+++ KK ++SG W PVK E
Sbjct: 620 GAGLMVVGVLLGFIIGFVTRGKK-SSSGNRWIPVKNEE 656
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|56788347|gb|AAW29952.1| putative purple acid phosphatase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/578 (62%), Positives = 432/578 (74%), Gaps = 27/578 (4%)
Query: 61 LPLGRLRNQ--------------PQEARPRSQPSPRHGPLVGQCRVCRVRDGTG-PRAGA 105
LPL LR+ P+ P P L+ + G G P
Sbjct: 90 LPLTNLRSNYTFRIFRWSESEIDPKHKDHDQNPLPGTKHLLAESEQLTFGSGVGMPEQIH 149
Query: 106 LGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGW 165
L FT + MR MF+A DGE+R+V+YGE KD +G+ A A RYER MCD PANS+IGW
Sbjct: 150 LSFTNMVNTMRGMFVAGDGEERFVRYGESKDLLGNSAAARGMRYEREHMCDSPANSTIGW 209
Query: 166 RDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATP 225
RDPGWIFD V+K L GVRYYY+VGSDSKGWSE HS+++R+ + ET+AF+FGDMG ATP
Sbjct: 210 RDPGWIFDTVMKNLNDGVRYYYQVGSDSKGWSEIHSYIARDVTAEETVAFMFGDMGCATP 269
Query: 226 YTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS 285
YTTF RTQDESIST+KWILRDIEALGDKPA +SHIGDISYARGYSW+WDEFFA +EP+AS
Sbjct: 270 YTTFIRTQDESISTVKWILRDIEALGDKPAMISHIGDISYARGYSWVWDEFFAQVEPIAS 329
Query: 286 RVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAP 345
V YHVCIGNHEYD+ QPWKPDW+ ++YG DGGGECGVP+SLKF+MPGNS E TG +AP
Sbjct: 330 TVPYHVCIGNHEYDFSTQPWKPDWAASIYGNDGGGECGVPHSLKFNMPGNSSESTGMKAP 389
Query: 346 ATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYT 405
TRNLYYS+DMG VHFVYISTETNFL+G +QY FIK DLESVDRKKTPFVVVQGHRPMYT
Sbjct: 390 PTRNLYYSYDMGTVHFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPMYT 449
Query: 406 TSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSE 465
TSNE RD +R +M+EHLEPLFV+NNVTLALWGHVHRYERFCP++N TCG+ +
Sbjct: 450 TSNEVRDTMIRQKMVEHLEPLFVKNNVTLALWGHVHRYERFCPISNNTCGTQW------Q 503
Query: 466 AFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSY 525
PVH+VIGMAGQDWQPIWQPRP+HPD P+FPQP +S+YR GEFGYTRLVA KEKLT+S+
Sbjct: 504 GNPVHLVIGMAGQDWQPIWQPRPNHPDLPIFPQPEQSMYRTGEFGYTRLVANKEKLTVSF 563
Query: 526 VGNHDGEVHDMVEILASGQVLSGDVTASVKESETTSGSGSGSGSGPRGELTKSTFSWFVQ 585
VGNHDGEVHD VE+LASG V+SG KES + S ++S W+ +
Sbjct: 564 VGNHDGEVHDTVEMLASGVVISGS-----KESTKIPNLKTVPASATLMGKSESNALWYAK 618
Query: 586 GASILVLGAFVGYVIGYISHTKKAATSGRSWTPVKTNE 623
GA ++V+G +G++IG+ + KK++ SG W PVK E
Sbjct: 619 GAGLMVVGVLLGFIIGFFTRGKKSS-SGNRWIPVKNEE 655
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147798406|emb|CAN70143.1| hypothetical protein VITISV_032086 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/546 (67%), Positives = 417/546 (76%), Gaps = 35/546 (6%)
Query: 78 QPSPRHGPLVGQCRVCRVRDGTGPRAGALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQ 137
P P LV + G GP L +T+ EMRVMF+ D R V+YG +D
Sbjct: 121 NPLPGTTHLVAESGEVGFGGGGGPEQIHLAYTDREDEMRVMFVTGDAGVRTVRYGLSRDA 180
Query: 138 MGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWS 197
M V A+V RYER MCD PAN S+GWRDPG+I DAV++ LKKG RYYYKVGSDS GWS
Sbjct: 181 MHRVVTAAVGRYEREDMCDSPANESVGWRDPGFIQDAVMRNLKKGKRYYYKVGSDSGGWS 240
Query: 198 ETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFV 257
H+F+SR+ DS +TIAFLFGDMG ATPY+TF RTQ+ES ST+KWILRDIEAL D PAF+
Sbjct: 241 AIHNFMSRDMDSEKTIAFLFGDMGTATPYSTFLRTQEESKSTVKWILRDIEALDDNPAFI 300
Query: 258 SHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTD 317
SHIGDISYARGYSWLWD FF +EP+ASR+ YHVCIGNHEYDWPLQPWKPDWS TVYGTD
Sbjct: 301 SHIGDISYARGYSWLWDNFFTQVEPIASRLPYHVCIGNHEYDWPLQPWKPDWSSTVYGTD 360
Query: 318 GGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQY 377
GGGECGVPYSLKF MPGNS E TGTRAPATRNL+YSFD VHFVYISTETNFL GS+QY
Sbjct: 361 GGGECGVPYSLKFKMPGNSSELTGTRAPATRNLFYSFDTKAVHFVYISTETNFLPGSSQY 420
Query: 378 NFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALW 437
+FIK DLESVDRKKTPFVVVQGHRPMYTTSNE RDAP+R RML++LEPLFV+NNVTLALW
Sbjct: 421 DFIKQDLESVDRKKTPFVVVQGHRPMYTTSNELRDAPVRERMLKYLEPLFVKNNVTLALW 480
Query: 438 GHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFP 497
GHVHRYERFCP+NNFTCG+MG++GE PVHIVIGMAGQDWQP W+PRPDHP DPV+P
Sbjct: 481 GHVHRYERFCPINNFTCGNMGLNGEYLGGLPVHIVIGMAGQDWQPTWEPRPDHPKDPVYP 540
Query: 498 QPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASGQVLSGDVTASVKES 557
QP SLYR GNHDGEVHD VEILASGQVLSG V E
Sbjct: 541 QPKWSLYR--------------------XGNHDGEVHDTVEILASGQVLSG-----VGED 575
Query: 558 ETTSGSGSGSGSGPRGELTKSTFSWFVQGASILVLGAFVGYVIGYISHTKKAATSGRSWT 617
+ + PR E+ + TFSW+V+GASILVLGAF+GYVIG++SH ++ A ++WT
Sbjct: 576 D----------AQPRVEVAEYTFSWYVKGASILVLGAFMGYVIGFVSHARREAALRKNWT 625
Query: 618 PVKTNE 623
PVK +
Sbjct: 626 PVKIED 631
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 625 | ||||||
| TAIR|locus:2014839 | 656 | PAP2 "AT1G13900" [Arabidopsis | 0.849 | 0.809 | 0.659 | 2.4e-202 | |
| TAIR|locus:2063777 | 651 | PAP9 "purple acid phosphatase | 0.857 | 0.823 | 0.605 | 2.6e-182 | |
| DICTYBASE|DDB_G0281861 | 594 | DDB_G0281861 [Dictyostelium di | 0.536 | 0.563 | 0.389 | 2.3e-62 | |
| TAIR|locus:2023870 | 613 | AT1G13750 [Arabidopsis thalian | 0.532 | 0.543 | 0.362 | 1.1e-48 | |
| TAIR|locus:2117353 | 615 | PAP24 "purple acid phosphatase | 0.497 | 0.505 | 0.344 | 2.6e-47 | |
| TAIR|locus:2177547 | 611 | PAP27 "purple acid phosphatase | 0.558 | 0.571 | 0.351 | 1.8e-46 | |
| DICTYBASE|DDB_G0268222 | 492 | DDB_G0268222 "acid phosphatase | 0.300 | 0.382 | 0.337 | 4e-23 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.217 | 0.311 | 0.337 | 5.7e-22 | |
| TAIR|locus:2083288 | 427 | PAP20 [Arabidopsis thaliana (t | 0.182 | 0.266 | 0.363 | 6.5e-21 | |
| TAIR|locus:2083218 | 437 | PAP21 "purple acid phosphatase | 0.171 | 0.244 | 0.419 | 7.5e-21 |
| TAIR|locus:2014839 PAP2 "AT1G13900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1958 (694.3 bits), Expect = 2.4e-202, P = 2.4e-202
Identities = 360/546 (65%), Positives = 424/546 (77%)
Query: 79 PSPRHGPLVGQCRVCRVRDGTG-PRAGALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQ 137
P +H L+ + G G P L FT + MRVMF+A DGE+R+V+YGE KD
Sbjct: 124 PGTKH--LLAESEQLTFGSGVGMPEQIHLSFTNMVNTMRVMFVAGDGEERFVRYGESKDL 181
Query: 138 MGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWS 197
+G+ A A RYER MCD PANS+IGWRDPGWIFD V+K L GVRYYY+VGSDSKGWS
Sbjct: 182 LGNSAAARGMRYEREHMCDSPANSTIGWRDPGWIFDTVMKNLNDGVRYYYQVGSDSKGWS 241
Query: 198 ETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFV 257
E HS+++R+ + ET+AF+FGDMG ATPYTTF RTQDESIST+KWILRDIEALGDKPA +
Sbjct: 242 EIHSYIARDVTAEETVAFMFGDMGCATPYTTFIRTQDESISTVKWILRDIEALGDKPAMI 301
Query: 258 SHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTD 317
SHIGDISYARGYSW+WDEFFA +EP+AS V YHVCIGNHEYD+ QPWKPDW+ ++YG D
Sbjct: 302 SHIGDISYARGYSWVWDEFFAQVEPIASTVPYHVCIGNHEYDFSTQPWKPDWAASIYGND 361
Query: 318 GGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQY 377
GGGECGVPYSLKF+MPGNS E TG +AP TRNLYYS+DMG VHFVYISTETNFL+G +QY
Sbjct: 362 GGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYYSYDMGTVHFVYISTETNFLKGGSQY 421
Query: 378 NFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALW 437
FIK DLESVDRKKTPFVVVQGHRPMYTTSNE RD +R +M+EHLEPLFV+NNVTLALW
Sbjct: 422 EFIKRDLESVDRKKTPFVVVQGHRPMYTTSNEVRDTMIRQKMVEHLEPLFVKNNVTLALW 481
Query: 438 GHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFP 497
GHVHRYERFCP++N TCG+ G P VH+VIGMAGQDWQPIWQPRP+HPD P+FP
Sbjct: 482 GHVHRYERFCPISNNTCGTQ-WQGNP-----VHLVIGMAGQDWQPIWQPRPNHPDLPIFP 535
Query: 498 QPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASGQVLSGDVTASVKES 557
QP +S+YR GEFGYTRLVA KEKLT+S+VGNHDGEVHD VE+LASG V+SG KES
Sbjct: 536 QPEQSMYRTGEFGYTRLVANKEKLTVSFVGNHDGEVHDTVEMLASGVVISGS-----KES 590
Query: 558 ETTXXXXXXXXXXPRGELTKSTFSWFVQGASILVLGAFVGYVIGYISHTKKAATSGRSWT 617
++S W+ +GA ++V+G +G++IG+ + KK++ SG W
Sbjct: 591 TKIPNLKTVPASATLMGKSESNALWYAKGAGLMVVGVLLGFIIGFFTRGKKSS-SGNRWI 649
Query: 618 PVKTNE 623
PVK E
Sbjct: 650 PVKNEE 655
|
|
| TAIR|locus:2063777 PAP9 "purple acid phosphatase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1769 (627.8 bits), Expect = 2.6e-182, P = 2.6e-182
Identities = 339/560 (60%), Positives = 409/560 (73%)
Query: 67 RNQPQEARPRSQPSPRHGPLVGQCRVCRVRDGTG-PRAGALGFTEDASEMRVMFLAEDGE 125
++Q + P P RH L+ + R P L +T++ +EMRV+F+ DGE
Sbjct: 112 KHQDHDHNPL--PGTRH--LLTESNQLNFRFAVNRPEQIHLSYTDNINEMRVVFVTGDGE 167
Query: 126 KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRY 185
+R +YGE KD++ ++AVA RYE MC PANS++GWRDPGW FDAV+K LK+G+RY
Sbjct: 168 EREARYGEVKDKLDNIAVARGVRYEIEHMCHAPANSTVGWRDPGWTFDAVMKNLKQGIRY 227
Query: 186 YYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILR 245
YY+VGSD KGWSE HSFVSRNE S ET+AF+FGDMG TPYTTF R ++ES+ST+KWILR
Sbjct: 228 YYQVGSDLKGWSEIHSFVSRNEGSEETLAFMFGDMGCYTPYTTFIRGEEESLSTVKWILR 287
Query: 246 DIEALGD-KPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQP 304
DIEALGD KP VSHIGDISYARGYSW+WDEFF IEP+AS+V YHVCIGNHEYDWP QP
Sbjct: 288 DIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEPIASKVPYHVCIGNHEYDWPNQP 347
Query: 305 WKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTG-TRAPATRNLYYSFDMGVVHFVY 363
WKPDW+ VYG D GGECGVPYS+KF+MPGNS E TG + P +RNLYYS+DMG VHFVY
Sbjct: 348 WKPDWAAYVYGKDSGGECGVPYSVKFNMPGNSTEATGMVKGPQSRNLYYSYDMGSVHFVY 407
Query: 364 ISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHL 423
ISTET+FL+G QY+F+K DLESV+R KTPFVVVQGHRPMYTTS + RDA +R +M+EHL
Sbjct: 408 ISTETDFLKGGKQYSFLKSDLESVNRSKTPFVVVQGHRPMYTTSRKIRDAAIREKMIEHL 467
Query: 424 EPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPI 483
EPL V+NNVT+ALWGHVHRYERFC ++N TCG E + PVH+VIGMAG+D QP+
Sbjct: 468 EPLLVKNNVTVALWGHVHRYERFCAISNNTCG------ERWQGNPVHLVIGMAGKDSQPM 521
Query: 484 WQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASG 543
W+PR +H D P+FPQP S+YRGGEFGY RLVA KE+LTLSYVGNHDGEVHD+VEILASG
Sbjct: 522 WEPRANHEDVPIFPQPANSMYRGGEFGYIRLVANKERLTLSYVGNHDGEVHDVVEILASG 581
Query: 544 QVLSGDVTASVKESETTXXXXXXXXXXPRGELTKSTFSWFVQGASILVLGAFVGYVIGYI 603
+V+SG + K+S G S V G ++ G FVG+ +
Sbjct: 582 EVISGSDDGT-KDSNFGSESDFAVLWYIEGA------SVMVVG---VIFGYFVGF-LSRK 630
Query: 604 SHTKKAATSGRSWTPVKTNE 623
+S RSW VK E
Sbjct: 631 KKESGVGSSNRSWIQVKNEE 650
|
|
| DICTYBASE|DDB_G0281861 DDB_G0281861 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 147/377 (38%), Positives = 204/377 (54%)
Query: 185 YYYKVGSDSKGWSETHSFVSRNEDSNETIAFL--FGDMGAATPYTTFERTQDESISTMKW 242
YY+ +D ++ N D + + AF+ FGD+G PYT TQ + T+
Sbjct: 228 YYFGSENDGMSAIQSFLSQPDNSDPSNSEAFVIGFGDLGTTFPYTALVETQYPASETIAA 287
Query: 243 ILRDIEA-LGDKP--------------------AF--VSHIGDISYARGYSWLWDEFFAL 279
I + I A G P F V HIGDISYARG +++WD F
Sbjct: 288 ISQTISAPYGSSPFVRAMGKQSNSIDRLDPSQTPFWSVHHIGDISYARGKAFIWDYFMDS 347
Query: 280 IEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEP 339
++P+ S+V Y V IGNHEYD+ QP+ P WS YG+D GGECGVPYS +FHM
Sbjct: 348 MQPIVSKVPYMVSIGNHEYDFIGQPFAPSWSN--YGSDSGGECGVPYSKRFHM------- 398
Query: 340 TGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQG 399
TG +TRNL++S++ G +HF +S E +FL GS Q+ ++ +DL SVDR+KTP+V+ G
Sbjct: 399 TGAE-DSTRNLWFSYENGPIHFTVMSAEHDFLPGSPQFEWLNNDLASVDREKTPWVIFSG 457
Query: 400 HRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCP-LNNFTCGSMG 458
HRP+YT++ + E +EPLF + +V +ALWGHVH YER C + NFTC
Sbjct: 458 HRPLYTSALPEDSIGSITALREAIEPLFQKYDVDMALWGHVHIYERTCGFIGNFTCADND 517
Query: 459 MDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATK 518
DG VH++IGMAG + W+ + +P S++R +G+ R A
Sbjct: 518 NDGT------VHVIIGMAGNTYSVPWEGSDISSGNGHEDEPEWSIFRSISYGHVRFYANT 571
Query: 519 EKLTLSYVGNHDGEVHD 535
L +VGNH VHD
Sbjct: 572 TSLYFEFVGNHRSIVHD 588
|
|
| TAIR|locus:2023870 AT1G13750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 141/389 (36%), Positives = 196/389 (50%)
Query: 120 LAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGL 179
LAE + VK GE+K ++ A + R MC PA + +GWRDPG+I A +K L
Sbjct: 196 LAEPVVEWGVKGGERK-----LSPAGTLTFARNSMCGAPART-VGWRDPGYIHTAFLKEL 249
Query: 180 KKGVRYYYKVGSD-SKG---WSETHSFVSRNEDSNETI--AFLFGDMGAA-----TPYTT 228
+Y Y+VG S G WS+ + F S ++ +FGDMG A + Y
Sbjct: 250 WPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPGQNSVQQVVIFGDMGKAEVDGSSEYND 309
Query: 229 FERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVA 288
F+R S++T K +++D++ K V HIGDI YA GY WD+F A IEP+AS V
Sbjct: 310 FQRA---SLNTTKQLIKDLK----KTDAVFHIGDICYANGYLSQWDQFIAQIEPIASTVP 362
Query: 289 YHVCIGNHEYDWPLQPWKPDWSYTVY-GTDGGGECGVPYSLKFHMPGNSLEPTGTRAPAT 347
Y + GNHE WP S + Y G D GGECGVP F++P + RA
Sbjct: 363 YMIASGNHERVWPN-------SGSFYEGLDSGGECGVPAETMFYVPAQN------RA--- 406
Query: 348 RNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPM---- 403
++YS D G+ F TE ++ +G+ QYNFI+H L SVDR+K P+++ HR +
Sbjct: 407 -KVWYSSDYGMFRFCVADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSS 465
Query: 404 -YTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGE 462
Y + E A R E L+ L+ + V +A++GH H YER CP+ C S
Sbjct: 466 TYFYAEEGSFAEPMGR--ESLQKLWQKYKVDIAIYGHAHNYERTCPVYQSVCTSHEKSNY 523
Query: 463 PSEAF-PVHIVIGMAG------QDWQPIW 484
+ +HIV G G D QP W
Sbjct: 524 KAPLNGTIHIVAGGGGAGLAEFSDLQPNW 552
|
|
| TAIR|locus:2117353 PAP24 "purple acid phosphatase 24" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 120/348 (34%), Positives = 181/348 (52%)
Query: 149 YERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVS 204
+ R MC PA +GWRDPG+ + +K L Y Y++G D S WS+ ++FVS
Sbjct: 222 FNRNSMCGNPARG-VGWRDPGFFHTSFLKELWPNREYIYRLGHDLVNGSTIWSKNYTFVS 280
Query: 205 R---NEDSNETIAFLFGDMGAATPYTTFERT--QDESISTMKWILRDIEALGDKPAFVSH 259
+DS + + +FGDMG + E Q S++T +++D++ + V H
Sbjct: 281 SPYPGQDSKQRV-IIFGDMGKGERDGSNEYNDYQPGSLNTTDQVIKDLKDID----IVFH 335
Query: 260 IGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGG 319
IGD++Y+ GY WD+F A ++P+AS V Y + GNHE DWP D GTD G
Sbjct: 336 IGDLTYSNGYLSQWDQFTAQVQPIASTVPYMIASGNHERDWP------DTGSFYAGTDSG 389
Query: 320 GECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNF 379
GECGVP F+ P + RA +Y D G+ F +E ++ +G+ QY F
Sbjct: 390 GECGVPAETMFYFPAEN------RA----KFWYKTDYGMFRFCVADSEHDWREGTEQYKF 439
Query: 380 IKHDLESVDRKKTPFVVVQGHRPM-YTTSN-ENRDAPLRNRM-LEHLEPLFVENNVTLAL 436
I++ L +VDRK P+++ HR + Y+T++ ++ M E L+ L+ + V LA
Sbjct: 440 IENCLATVDRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESLQKLWQKYKVDLAF 499
Query: 437 WGHVHRYERFCPLNNFTCGSMGMDGEPSEAFP--VHIVIGMAGQDWQP 482
+GHVH YER CP+ C + D S F +H+V+G AG P
Sbjct: 500 YGHVHNYERTCPIYESQCVNNDKD-HYSGTFKGTIHVVVGGAGSHLSP 546
|
|
| TAIR|locus:2177547 PAP27 "purple acid phosphatase 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 139/395 (35%), Positives = 203/395 (51%)
Query: 101 PRAGALGFTEDASEMRVMFLA--EDGEK-RYVKYGEKKDQMGHVAVASVERYERGQMCDK 157
PR ALG D EM V + + GE +V++ +K + A + R MC
Sbjct: 171 PRL-ALGKKWD--EMTVTWTSGYNIGEAVPFVEWS-RKGTRSRRSPAGTLTFTRNSMCGA 226
Query: 158 PANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSD-SKG---WSETHSFVSR---NEDSN 210
PA + +GWRDPG+I A +K L ++Y Y++G + G WS+ +F S +DS
Sbjct: 227 PART-VGWRDPGFIHTASLKDLWPNLKYTYRMGHELMNGSIVWSKNFTFKSSPYPGQDSL 285
Query: 211 ETIAFLFGDMGAATPYTTFERT--QDESISTMKWILRDIEALGDKPAFVSHIGDISYARG 268
+ + +FGDMG + E Q S++T +++D++ + V HIGDI+YA G
Sbjct: 286 QRV-IIFGDMGKGERDGSNEYNDYQPGSLNTTDQLIKDLKNID----IVFHIGDITYANG 340
Query: 269 YSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYG-TDGGGECGVPYS 327
Y WD+F A +EP+AS V Y V GNHE DWP D S + YG D GGECGVP
Sbjct: 341 YISQWDQFTAQVEPIASTVPYMVASGNHERDWP------D-SGSFYGGKDSGGECGVPAE 393
Query: 328 LKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESV 387
F P + +A +YS D G+ F TE ++ +GS QY FI+ L SV
Sbjct: 394 TMFDFPAEN------KA----KFWYSADYGMFRFCVADTEHDWREGSEQYQFIERCLASV 443
Query: 388 DRKKTPFVVVQGHRPM-YTTSN-ENRDAPLRNRM-LEHLEPLFVENNVTLALWGHVHRYE 444
DR+ P+++ HR + Y+T++ ++ M E L+ L+ + V +A +GHVH YE
Sbjct: 444 DRRAQPWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQKLWQKYKVDIAFYGHVHNYE 503
Query: 445 RFCPLNNFTCGSMGMDGEPSEAFP--VHIVIGMAG 477
R CP+ C S AF +H+V+G AG
Sbjct: 504 RTCPIYQNQCMD-NEKSHYSGAFKGTIHVVVGGAG 537
|
|
| DICTYBASE|DDB_G0268222 DDB_G0268222 "acid phosphatase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 208 (78.3 bits), Expect = 4.0e-23, Sum P(2) = 4.0e-23
Identities = 75/222 (33%), Positives = 102/222 (45%)
Query: 302 LQPWKPDWSYTVYGTDGGGECGVPYSLK-----FHMPGNSLEPTGTRAPATRNLYYSFDM 356
LQ +P S Y T G V YS F+MPG+S +P +YS+D
Sbjct: 265 LQALEPITSKVPYMTAPGNH-DVFYSFNSYQNTFNMPGSSNQP-----------WYSYDY 312
Query: 357 GVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTP--FVVVQGHRPMYTTSNEN--RD 412
VHF+ STE++ + QY +IK+DLE+ RKK P +V+ HRP Y ++ + R
Sbjct: 313 NGVHFLSYSTESDLAPFTQQYQWIKNDLETY-RKKNPSGWVIAYAHRPYYCSTQMDWCRK 371
Query: 413 APLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIV 472
LR + + LF NV + L GH H YER P+ + +G P VH
Sbjct: 372 QTLRALIESTIGELFQNYNVDIYLAGHTHAYERTVPV--YQQSPIGTYEYPGGT--VHFT 427
Query: 473 IGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRL 514
IG G Q DH + + P P S R GE GY +L
Sbjct: 428 IGTPGN------QEGLDH--NWILPAPSWSASRFGELGYGQL 461
|
|
| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 221 (82.9 bits), Expect = 5.7e-22, Sum P(4) = 5.7e-22
Identities = 52/154 (33%), Positives = 87/154 (56%)
Query: 324 VPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHD 383
V ++ ++ MP E +G+ + NLYYSF++ VH + + + T++ + S+QY+++K D
Sbjct: 222 VSFNSRWKMP---YEESGSNS----NLYYSFEVAGVHAIMLGSYTDYDRYSDQYSWLKAD 274
Query: 384 LESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRY 443
L VDR++TP+++V H P Y ++N ++ + M+ +EPL + V + GHVH Y
Sbjct: 275 LSKVDRERTPWLIVLFHVPWYNSNNAHQHEG--DEMMAEMEPLLYASGVDIVFTGHVHAY 332
Query: 444 ERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAG 477
ER +NN G+ PVHI IG G
Sbjct: 333 ERTKRVNN---------GKSDPCGPVHITIGDGG 357
|
|
| TAIR|locus:2083288 PAP20 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 205 (77.2 bits), Expect = 6.5e-21, Sum P(3) = 6.5e-21
Identities = 44/121 (36%), Positives = 70/121 (57%)
Query: 326 YSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLE 385
Y+ ++ MP E +G+ + NLYYSF++ VH + + + T+F GS QY +++++L+
Sbjct: 224 YNKRWRMP---FEESGSSS----NLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLK 276
Query: 386 SVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYER 445
+DRK TP+VV H P Y ++ ++ M E +E L + V L GHVH YER
Sbjct: 277 KIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVEMKESMETLLYKARVDLVFAGHVHAYER 336
Query: 446 F 446
F
Sbjct: 337 F 337
|
|
| TAIR|locus:2083218 PAP21 "purple acid phosphatase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 208 (78.3 bits), Expect = 7.5e-21, Sum P(4) = 7.5e-21
Identities = 47/112 (41%), Positives = 64/112 (57%)
Query: 349 NLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSN 408
NLYYSFD+ VH V + + T + S+QY++++ DL VDRKKTP++VV H P Y+T+
Sbjct: 245 NLYYSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTNK 304
Query: 409 ENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFT---CGSM 457
+ +M LE L V + GHVH YERF P+ N CG M
Sbjct: 305 AHYGEG--EKMRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPM 354
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LMG7 | PPA2_ARATH | No assigned EC number | 0.6332 | 0.8816 | 0.8399 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 625 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 6e-89 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 4e-35 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-11 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 7e-10 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 3e-09 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 2e-04 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 277 bits (711), Expect = 6e-89
Identities = 113/338 (33%), Positives = 155/338 (45%), Gaps = 52/338 (15%)
Query: 208 DSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR 267
D +FGDMG T S +T+ + +++ + H+GD++YA
Sbjct: 1 DDTPFKFAVFGDMGQNTNN---------STNTLDHLEKELG----NYDAILHVGDLAYAD 47
Query: 268 GYS--WLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVP 325
GY+ WD F IEP+AS V Y V GNHE D+ +K + +
Sbjct: 48 GYNNGSRWDTFMRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRF--------- 98
Query: 326 YSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNF---LQGSNQYNFIKH 382
H P S T NL+YSFD+G VHFV +STE +F GS QY++++
Sbjct: 99 ----PHSPSGS----------TSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEA 144
Query: 383 DLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHR 442
DL VDR KTP+++V GHRPMY ++ ++ D +M LE LF + V L L GHVH
Sbjct: 145 DLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHA 204
Query: 443 YERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRS 502
YER CP+ N T + PVHIVIG G D P S
Sbjct: 205 YERTCPVYNGTVVGDCNP-YSNPKGPVHIVIGAGGNDEGLDPFSAPPPA---------WS 254
Query: 503 LYRGGEFGYTRLVATKEK-LTLSYVGNHDGEVHDMVEI 539
+R ++G+ RL L ++ N DG V D I
Sbjct: 255 AFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFWI 292
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 4e-35
Identities = 119/406 (29%), Positives = 180/406 (44%), Gaps = 72/406 (17%)
Query: 112 ASEMRVMFLAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171
+MR+ ++ +D V YG + A + Y + + +R G I
Sbjct: 54 PDKMRISWITQDSIPPSVVYGTVSGKYEGSANGTSSSY----------HYLLIYRS-GQI 102
Query: 172 FDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAF-LFGDMGAATPYTTFE 230
D VI LK YYYK G G S T F R S I F + GD+G + +
Sbjct: 103 NDVVIGPLKPNTVYYYKCG----GPSSTQEFSFRTPPSKFPIKFAVSGDLGT----SEWT 154
Query: 231 RTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYH 290
++ E +S KW D F+ GD+SYA Y LWD F L++P+AS+ +
Sbjct: 155 KSTLEHVS--KW---------DYDVFILP-GDLSYANFYQPLWDTFGRLVQPLASQRPWM 202
Query: 291 VCIGNHEYD-WPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRN 349
V GNHE + P+ + + Y+ ++ MP E +G+ T N
Sbjct: 203 VTHGNHELEKIPILHPEKFTA---------------YNARWRMP---FEESGS----TSN 240
Query: 350 LYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNE 409
LYYSF++ VH + + + T+F GS QY +++++L+ +DRK TP+VV H P Y ++
Sbjct: 241 LYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEA 300
Query: 410 NRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPV 469
++ M E +E L + V L GHVH YERF G+ + PV
Sbjct: 301 HQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERF---------DRVYQGKTDKCGPV 351
Query: 470 HIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLV 515
+I IG G R + P+P SL+R FG+ +L
Sbjct: 352 YITIGDGGN--------REGLATKYIDPKPDISLFREASFGHGQLN 389
|
Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 62.9 bits (152), Expect = 2e-11
Identities = 32/211 (15%), Positives = 59/211 (27%), Gaps = 36/211 (17%)
Query: 233 QDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292
+ + + +L + KP V +GD+ S L + + ++
Sbjct: 11 GLDDLDLLLLLLELLGEP--KPDLVLFLGDLVDRGPPS-LEVLALLFALKLKAPGPVYLV 67
Query: 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYY 352
GNH++D Y +P
Sbjct: 68 RGNHDFDSGNSELGF------------------YLECAGLPYV-------------LGNG 96
Query: 353 SFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRD 412
G V + +S+ G F++ + ++ H P+ + +
Sbjct: 97 DVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLS--PSLDSG 154
Query: 413 APLRNRMLEHLEPLFVENNVTLALWGHVHRY 443
+ E LE L +N V L L GH H
Sbjct: 155 DDIYLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 54.8 bits (133), Expect = 7e-10
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 468 PVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRL-VATKEKLTLSYV 526
PVHIV+G AG P P+P S +R ++GY RL V + L +V
Sbjct: 3 PVHIVVGAAGNGLDPFPDPQPPW-----------SAFRDSDYGYGRLTVHNRTHLYWEFV 51
Query: 527 GNHDGEVHD 535
+ DG V D
Sbjct: 52 RSDDGTVLD 60
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 3e-09
Identities = 68/347 (19%), Positives = 105/347 (30%), Gaps = 103/347 (29%)
Query: 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWD 274
GD G Q M + A P F+ +GD Y G + D
Sbjct: 4 LALGDWGGGGTAG-----QKAVAKAMAKV-----AAELGPDFILSLGDNFYDDGVGSVDD 53
Query: 275 E-FFALIEPV----ASRVAYHVCIGNHEYDWPLQPWKPDWS----YTVYGTDGGGECGVP 325
F E V + +V +++ +GNH+Y + S YT P
Sbjct: 54 PRFETTFEDVYSAPSLQVPWYLVLGNHDYSG-------NVSAQIDYTK----------RP 96
Query: 326 YSLKFHMPGNSLEPTGTRAPATRNLYYSFDMG------VVHFVYIST------------- 366
S ++ MP YY V F+ I T
Sbjct: 97 NSPRWTMP---------------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASP 141
Query: 367 --ETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLE 424
N Q +++ L + +V GH P+Y++ + L +R L
Sbjct: 142 YGPPNGKLAEEQLAWLEKTLA---ASTADWKIVVGHHPIYSSGEHGPTSCLVDR----LL 194
Query: 425 PLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIW 484
PL + V L GH H + + + +V G
Sbjct: 195 PLLKKYKVDAYLSGHDHNLQHI---------------KDDGSGTSFVVSGAGS------- 232
Query: 485 QPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDG 531
+ RP PQ S + G+ L TKE+LT+ + + DG
Sbjct: 233 KARPSVKHIDKVPQFF-SGFTSSGGGFAYLELTKEELTVRFY-DADG 277
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 2e-04
Identities = 24/88 (27%), Positives = 31/88 (35%), Gaps = 9/88 (10%)
Query: 373 GSNQYNFIKHDLESVDRKKTPFVVVQG-------HRPMYTTSNENRDAPLRNRMLEHLEP 425
G + + L + P VV G H P Y + +P + E L
Sbjct: 40 GPDPEEVLAAALALLLLLGIPVYVVPGNHDILLTHGPPY--DPLDELSPDEDPGSEALLE 97
Query: 426 LFVENNVTLALWGHVHRYERFCPLNNFT 453
L + V L L GH H YER P T
Sbjct: 98 LLEKYGVDLVLSGHTHVYERREPDGGGT 125
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 625 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.98 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.94 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.91 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.89 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.88 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.88 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.84 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.81 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.81 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.77 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.7 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.62 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.59 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.58 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.5 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.4 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.39 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.39 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.37 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.34 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.32 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.3 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.26 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.23 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.2 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.2 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.18 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 98.94 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 98.89 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.81 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.78 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.75 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 98.74 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.73 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.7 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 98.69 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.6 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 98.56 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.56 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.56 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 98.55 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.54 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.53 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.49 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.49 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.46 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.42 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.38 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.26 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.24 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.24 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.23 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.13 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.11 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.07 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 97.99 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 97.89 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 97.89 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 97.87 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 97.84 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 97.83 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.79 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 97.73 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 97.66 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.64 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 97.57 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 97.57 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 97.52 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.51 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.51 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 97.48 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.4 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.34 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.24 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.05 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.03 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.02 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.02 | |
| PHA02239 | 235 | putative protein phosphatase | 96.96 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 96.91 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 96.67 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.64 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 96.61 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 96.58 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.51 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 96.43 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 96.4 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.28 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.27 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.23 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.17 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 96.16 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.15 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.05 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.04 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.03 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 95.92 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 95.42 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 95.39 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 95.27 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 95.04 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 94.99 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 94.71 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 94.55 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 93.91 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 93.89 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 92.4 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 92.23 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 91.94 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 91.08 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 90.97 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 90.87 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 90.43 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 90.32 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 89.04 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 88.96 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 88.7 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 88.47 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 86.19 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 86.17 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 86.13 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 85.89 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 85.72 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 84.75 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 82.5 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 82.18 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 81.4 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 81.1 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-69 Score=571.59 Aligned_cols=390 Identities=49% Similarity=0.834 Sum_probs=317.8
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecCCCceEEEEEccCCCCCcE-EEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHV-AVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~~~~~~V~yg~~~~~~~~~-~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
..+.|+||||++++..++|+|+|.|.+.....|+||......... +.+.+..+ |+... .+|+..|++|+|+
T Consensus 41 ~~~~peQvhlS~~~~~~~m~VswvT~~~~~~~V~Yg~~~~~~~~~~~~~~~~~~-----~~~y~---~~~~~sg~ih~~~ 112 (452)
T KOG1378|consen 41 VVNSPEQVHLSFTDNLNEMRVSWVTGDGEENVVRYGEVKDKLDNSAARGMTEAW-----TDGYA---NGWRDSGYIHDAV 112 (452)
T ss_pred cCCCCCeEEEeccCCCCcEEEEEeCCCCCCceEEEeecCCCccccccccceEEE-----ecccc---cccceeeeEeeee
Confidence 446699999999999889999999999888999999876553322 12333332 22222 2456789999999
Q ss_pred EcCCCCCcEEEEEEecCCCCcceeEEEEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCc
Q 006938 176 IKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPA 255 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~~~~~S~~~~F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pd 255 (625)
|++|+|+|+||||||++. .||++|+|+|+|....+.++++|||+|...... .++.. .. ...++|
T Consensus 113 ~~~L~~~t~YyY~~Gs~~-~wS~~f~F~t~p~~~~~~~~~i~GDlG~~~~~~----------s~~~~----~~-~~~k~d 176 (452)
T KOG1378|consen 113 MKNLEPNTRYYYQVGSDL-KWSEIFSFKTPPGQDSPTRAAIFGDMGCTEPYT----------STLRN----QE-ENLKPD 176 (452)
T ss_pred ecCCCCCceEEEEeCCCC-CcccceEeECCCCccCceeEEEEcccccccccc----------chHhH----Hh-cccCCc
Confidence 999999999999999986 599999999999555678999999999986532 11111 11 134799
Q ss_pred EEEEcCccccCCCch-hhHHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCC
Q 006938 256 FVSHIGDISYARGYS-WLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPG 334 (625)
Q Consensus 256 fvl~~GDivy~~g~~-~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~ 334 (625)
+|||+||++|+++.. .+||+|++++||+++.+|+|++.||||+++... .|+.+|..||.||.
T Consensus 177 ~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~-----------------~~F~~y~~Rf~mP~ 239 (452)
T KOG1378|consen 177 AVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQ-----------------PCFVPYSARFNMPG 239 (452)
T ss_pred EEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCc-----------------ccccccceeeccCC
Confidence 999999999999988 699999999999999999999999999985421 15567999999998
Q ss_pred CCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCccc--CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCC--CC
Q 006938 335 NSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNF--LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSN--EN 410 (625)
Q Consensus 335 ~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~--~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~--~~ 410 (625)
++..+ ..+.||||++|.||||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|+|+|++.. +.
T Consensus 240 ~~s~s-------~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~ 312 (452)
T KOG1378|consen 240 NSSES-------DSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHY 312 (452)
T ss_pred CcCCC-------CCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhh
Confidence 76432 246899999999999999999874 35689999999999999987799999999999999987 33
Q ss_pred CChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCC-CCCCCcEEEEECCCCCCCCCCCCCCCC
Q 006938 411 RDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGE-PSEAFPVHIVIGMAGQDWQPIWQPRPD 489 (625)
Q Consensus 411 ~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~-~~~~g~vyIv~G~gG~~~~~~~~~~~~ 489 (625)
.. ...+.+++.|++||.+|+||++|+||.|.|||++|++|.+|.+.+.... -++++|+||++|.||+....
T Consensus 313 re-G~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~------- 384 (452)
T KOG1378|consen 313 RE-GEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHL------- 384 (452)
T ss_pred cc-CcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCccccc-------
Confidence 22 2234678899999999999999999999999999999999977765333 35899999999999976321
Q ss_pred CCCCCCCCCCCccceeeCcccEEEEEE-eCCEEEEEEEECC--CCcEEEEEEEEecCc
Q 006938 490 HPDDPVFPQPMRSLYRGGEFGYTRLVA-TKEKLTLSYVGNH--DGEVHDMVEILASGQ 544 (625)
Q Consensus 490 ~~~~~~~~~p~ws~~~~~~~Gy~~v~v-~~~~L~~~~i~~~--dG~v~D~f~I~k~~~ 544 (625)
+....++|+||+||...|||++|++ |.+++.++++++. +|+++|+|+|.|+-.
T Consensus 385 --~~~~~~~p~~Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~ 440 (452)
T KOG1378|consen 385 --DPFSSPQPEWSAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYR 440 (452)
T ss_pred --CcccCCCCcccccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccC
Confidence 1112378999999999999999997 7889999999863 378999999998643
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-68 Score=575.73 Aligned_cols=379 Identities=30% Similarity=0.428 Sum_probs=311.6
Q ss_pred CCCCCceeEEEEecCCCCceEEEEEecCCCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 96 RDGTGPRAGALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 96 ~~~~~P~qv~L~~~~~~~~~~V~W~T~~~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
++...|+||||++++ +++|+|+|.|.+...+.|+||++++.+..++.+++.+|... ..| .++++|+|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~~~~~V~yG~~~~~l~~~a~g~~~~~~~~----------~~~-~~g~iH~v~ 106 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDSIPPSVVYGTVSGKYEGSANGTSSSYHYL----------LIY-RSGQINDVV 106 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCCCCCEEEEecCCCCCcceEEEEEEEEecc----------ccc-cCCeEEEEE
Confidence 467889999999997 89999999999988899999999988888888888888631 123 368999999
Q ss_pred EcCCCCCcEEEEEEecCCCCcceeEEEEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCc
Q 006938 176 IKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPA 255 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~~~~~S~~~~F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pd 255 (625)
|+||+|+|+|+|||+.+ .+|++++|+|+|.. .+++|+++||+|.... ...++ +.++ +.+||
T Consensus 107 l~~L~p~T~Y~Yrvg~~--~~s~~~~F~T~p~~-~~~~f~v~GDlG~~~~----------~~~tl----~~i~--~~~pD 167 (427)
T PLN02533 107 IGPLKPNTVYYYKCGGP--SSTQEFSFRTPPSK-FPIKFAVSGDLGTSEW----------TKSTL----EHVS--KWDYD 167 (427)
T ss_pred eCCCCCCCEEEEEECCC--CCccceEEECCCCC-CCeEEEEEEeCCCCcc----------cHHHH----HHHH--hcCCC
Confidence 99999999999999964 46899999999863 6799999999986531 12233 3333 35899
Q ss_pred EEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCC
Q 006938 256 FVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGN 335 (625)
Q Consensus 256 fvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~ 335 (625)
|||++||++|+++++.+|+.|++.++++.+.+|+|+++||||...... ...+.+.+|..+|.||.+
T Consensus 168 ~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~--------------~~~~~f~~y~~rf~mP~~ 233 (427)
T PLN02533 168 VFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPI--------------LHPEKFTAYNARWRMPFE 233 (427)
T ss_pred EEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCcccccccccc--------------ccCcCccchhhcccCCcc
Confidence 999999999998888899999999999999999999999999863210 011233458889999975
Q ss_pred CCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhh
Q 006938 336 SLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPL 415 (625)
Q Consensus 336 ~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~ 415 (625)
.. | ...+.||||++|++|||+||++.++..+.+|++||+++|++++++++||+||++|+|+|++.....+...
T Consensus 234 ~~---g----~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~ 306 (427)
T PLN02533 234 ES---G----STSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKE 306 (427)
T ss_pred cc---C----CCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcch
Confidence 32 1 1257899999999999999999887778999999999999988888999999999999987643322222
Q ss_pred hHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCC
Q 006938 416 RNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPV 495 (625)
Q Consensus 416 ~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~ 495 (625)
...+++.|++||.+|+||++|+||+|.|||++|++++++. +++|+||++|+||+.... +....
T Consensus 307 ~~~~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~---------~~gpvyiv~G~gG~~e~~--------~~~~~ 369 (427)
T PLN02533 307 SVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTD---------KCGPVYITIGDGGNREGL--------ATKYI 369 (427)
T ss_pred hHHHHHHHHHHHHHhCCcEEEecceecccccccccCCccC---------CCCCEEEEeCCCcccccc--------ccccC
Confidence 3456889999999999999999999999999999998762 589999999999986421 11122
Q ss_pred CCCCCccceeeCcccEEEEEE-eCCEEEEEEEECCCCc--EEEEEEEEecC
Q 006938 496 FPQPMRSLYRGGEFGYTRLVA-TKEKLTLSYVGNHDGE--VHDMVEILASG 543 (625)
Q Consensus 496 ~~~p~ws~~~~~~~Gy~~v~v-~~~~L~~~~i~~~dG~--v~D~f~I~k~~ 543 (625)
.++|+|++|+...|||++|++ |.++|.++|+++.+|+ +.|+|+|.|..
T Consensus 370 ~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~ 420 (427)
T PLN02533 370 DPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLL 420 (427)
T ss_pred CCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEecc
Confidence 367899999999999999985 9999999999877763 89999998753
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-44 Score=374.65 Aligned_cols=286 Identities=39% Similarity=0.639 Sum_probs=219.8
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch--hhHHHHHHhHHHhhcCC
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS--WLWDEFFALIEPVASRV 287 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~--~~wd~f~~~l~~~~~~i 287 (625)
.+++|+++||+|.... .+.++++++.+. ..+|||||++||++|+.+.. .+|+.|++.++++...+
T Consensus 3 ~~~~f~v~gD~~~~~~---------~~~~~~~~l~~~----~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (294)
T cd00839 3 TPFKFAVFGDMGQNTN---------NSTNTLDHLEKE----LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYV 69 (294)
T ss_pred CcEEEEEEEECCCCCC---------CcHHHHHHHHhc----cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcC
Confidence 5689999999997522 234555555432 46899999999999988765 78999999999999999
Q ss_pred ceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCC
Q 006938 288 AYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTE 367 (625)
Q Consensus 288 P~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~ 367 (625)
|+++++||||+........ . . .+..++.++.... ....+.||+|++|++|||+|||+
T Consensus 70 P~~~~~GNHD~~~~~~~~~---~----~---------~~~~~~~~~~~~~-------~~~~~~~Ysf~~g~v~fi~Lds~ 126 (294)
T cd00839 70 PYMVTPGNHEADYNFSFYK---I----K---------AFFPRFRFPHSPS-------GSTSNLWYSFDVGPVHFVSLSTE 126 (294)
T ss_pred CcEEcCcccccccCCCCcc---c----c---------cccccccccCCCC-------CCCCCceEEEeeCCEEEEEEecc
Confidence 9999999999974321100 0 0 0011222222211 11356799999999999999998
Q ss_pred ccc---CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 368 TNF---LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 368 ~~~---~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
... ..+.+|++||+++|+++++++.+|+||++|+|+|+.......+......++.|++||++|+|+++|+||+|.|+
T Consensus 127 ~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~ 206 (294)
T cd00839 127 VDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYE 206 (294)
T ss_pred cccccCCCCcHHHHHHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeE
Confidence 654 46789999999999987766779999999999998765543322345678899999999999999999999999
Q ss_pred eeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEeCC-EEEE
Q 006938 445 RFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKE-KLTL 523 (625)
Q Consensus 445 R~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~-~L~~ 523 (625)
|++|+++++|. .......++++++||++|+||+.++..... .+.++|++++...+||++|++..+ +|++
T Consensus 207 r~~p~~~~~~~-~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~t~l~~ 276 (294)
T cd00839 207 RTCPVYNGTVV-GDCNPYSNPKGPVHIVIGAGGNDEGLDPFS---------APPPAWSAFRESDYGFGRLTVHNSTHLHF 276 (294)
T ss_pred eechhhCCEec-cccccccCCCccEEEEECCCccccCcCccc---------CCCCCceEEEeccCCEEEEEEEecCeEEE
Confidence 99999998875 111122247899999999999987643211 123688989899999999998654 9999
Q ss_pred EEEECCCCcEEEEEEEEe
Q 006938 524 SYVGNHDGEVHDMVEILA 541 (625)
Q Consensus 524 ~~i~~~dG~v~D~f~I~k 541 (625)
+++.+.+|+++|+|+|.|
T Consensus 277 ~~~~~~~g~v~D~f~i~k 294 (294)
T cd00839 277 EWIRNDDGVVIDSFWIIK 294 (294)
T ss_pred EEEECCCCeEEEEEEEeC
Confidence 999888999999999986
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=301.29 Aligned_cols=287 Identities=19% Similarity=0.258 Sum_probs=198.3
Q ss_pred EEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC---chhhHHHHHH
Q 006938 202 FVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG---YSWLWDEFFA 278 (625)
Q Consensus 202 F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g---~~~~wd~f~~ 278 (625)
|.+.......++|+++||+|.+.. .|...++.|..+. + ..++||||.+||+++.+- .+.+|++-|+
T Consensus 17 ~~~~~~~~~~l~F~~vGDwG~g~~------~Q~~VA~~M~~~~----~-~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE 85 (394)
T PTZ00422 17 FISSYSVKAQLRFASLGNWGTGSK------QQKLVASYLKQYA----K-NERVTFLVSPGSNFPGGVDGLNDPKWKHCFE 85 (394)
T ss_pred EEeecccCCeEEEEEEecCCCCch------hHHHHHHHHHHHH----H-hCCCCEEEECCccccCCCCCccchhHHhhHh
Confidence 444444455789999999997532 2444343333332 2 368999999999984332 3567777666
Q ss_pred hHH-Hhh--cCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCC---c--cccccccccccCCCCCCCCCCCCCCCCCc
Q 006938 279 LIE-PVA--SRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGG---E--CGVPYSLKFHMPGNSLEPTGTRAPATRNL 350 (625)
Q Consensus 279 ~l~-~~~--~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gg---e--~~~~y~~~f~~P~~~~~~~G~~~~~~~~~ 350 (625)
.+. ... .++||++++||||+.++.++--..+.+ .|-...+. + .......||.||. .
T Consensus 86 ~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~-~y~~~~~~~~~~y~~~~~~~~RW~mP~---------------~ 149 (394)
T PTZ00422 86 NVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQN-VYLNGHGQTDIEYDSNNDIYPKWIMPN---------------Y 149 (394)
T ss_pred hhccCcchhhCCCeEEeCCcccccCCchhhhccccc-cccccccccccccccccccCCCccCCc---------------h
Confidence 553 223 579999999999997653321110110 01000000 0 0001245888884 4
Q ss_pred eEEE----Ee-------------CcEEEEEEeCCcc---c---CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCC
Q 006938 351 YYSF----DM-------------GVVHFVYISTETN---F---LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTS 407 (625)
Q Consensus 351 yYsf----d~-------------G~v~fI~LDT~~~---~---~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~ 407 (625)
||++ .. ..+.||+|||... + .....|++||+++|+.+ ++.++|+||++|||+|+.+
T Consensus 150 yY~~~~~f~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG 228 (394)
T PTZ00422 150 WYHYFTHFTDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSG 228 (394)
T ss_pred hheeeeeeecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecC
Confidence 6654 21 2289999999621 1 12468999999999754 3567899999999999998
Q ss_pred CCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCC
Q 006938 408 NENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPR 487 (625)
Q Consensus 408 ~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~ 487 (625)
.++.+ ..+++.|+|||++|+||++|+||+|+||+.. .+++.||++|+||...+..
T Consensus 229 ~hg~~----~~L~~~L~PLL~ky~VdlYisGHDH~lq~i~-----------------~~gt~yIvSGaGs~~~~~~---- 283 (394)
T PTZ00422 229 SSKGD----SYLSYYLLPLLKDAQVDLYISGYDRNMEVLT-----------------DEGTAHINCGSGGNSGRKS---- 283 (394)
T ss_pred CCCCC----HHHHHHHHHHHHHcCcCEEEEccccceEEec-----------------CCCceEEEeCccccccCCC----
Confidence 76544 4578899999999999999999999999974 2568899999998864321
Q ss_pred CCCCCCCCCCCCCccceeeCcccEEEEEEeCCEEEEEEEECCCCcEEEEEEEEecCccccCC
Q 006938 488 PDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASGQVLSGD 549 (625)
Q Consensus 488 ~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v~D~f~I~k~~~~~~~~ 549 (625)
. ...+++.|....+||+.++++++.|+++|+.+.+|++++++++.++......-
T Consensus 284 ----~----~~~~~s~F~~~~~GF~~~~l~~~~l~~~fid~~~GkvL~~~~~~~~~~~~~~~ 337 (394)
T PTZ00422 284 ----I----MKNSKSLFYSEDIGFCIHELNAEGMVTKFVSGNTGEVLYTHKQPLKKRKLRFQ 337 (394)
T ss_pred ----C----CCCCCcceecCCCCEEEEEEecCEEEEEEEeCCCCcEEEEeeecccchhhhhh
Confidence 0 12456778888899999999999999999965799999999997776554433
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-30 Score=270.09 Aligned_cols=251 Identities=22% Similarity=0.350 Sum_probs=173.1
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch----hhHH-HHHHhHHHhhcC
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS----WLWD-EFFALIEPVASR 286 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~----~~wd-~f~~~l~~~~~~ 286 (625)
++|+++||+|..... .|. +..+.|.+.++ ..+|||||++||++|..+.. ..|. .|.+.+..+...
T Consensus 1 ~~f~~~gD~g~~~~~-----~~~---~~~~~~~~~~~--~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~ 70 (277)
T cd07378 1 LRFLALGDWGGGGTA-----GQK---AVAKAMAKVAA--ELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQ 70 (277)
T ss_pred CeEEEEeecCCCCCH-----HHH---HHHHHHHHHHH--hcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhc
Confidence 379999999986211 122 22222333222 26899999999999987632 3343 333333434468
Q ss_pred CceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeC------cEE
Q 006938 287 VAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMG------VVH 360 (625)
Q Consensus 287 iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G------~v~ 360 (625)
+|+++++||||+...... .. .|.. ..+..+|.+| ..||+|+++ +++
T Consensus 71 ~P~~~v~GNHD~~~~~~~---~~---~~~~-------~~~~~~~~~~---------------~~~y~~~~~~~~~~~~~~ 122 (277)
T cd07378 71 VPWYLVLGNHDYSGNVSA---QI---DYTK-------RPNSPRWTMP---------------AYYYRVSFPFPSSDTTVE 122 (277)
T ss_pred CCeEEecCCcccCCCchh---ee---ehhc-------cCCCCCccCc---------------chheEEEeecCCCCCEEE
Confidence 999999999998632100 00 0100 0012233333 359999998 799
Q ss_pred EEEEeCCccc---------------CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHH
Q 006938 361 FVYISTETNF---------------LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEP 425 (625)
Q Consensus 361 fI~LDT~~~~---------------~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~ 425 (625)
||+|||.... ..+.+|++||+++|+++. .+|+||++|+|+++....... ...++.|.+
T Consensus 123 ~i~LDt~~~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~~~----~~~~~~l~~ 195 (277)
T cd07378 123 FIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHGPT----SCLVDRLLP 195 (277)
T ss_pred EEEEeChhHcCccccccccccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCCCc----HHHHHHHHH
Confidence 9999997421 135799999999999853 379999999999987544322 345789999
Q ss_pred HHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCcccee
Q 006938 426 LFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYR 505 (625)
Q Consensus 426 l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~ 505 (625)
++++++|+++|+||.|.+++..+. ..++.||++|+||......... ....+.|..++
T Consensus 196 l~~~~~v~~vl~GH~H~~~~~~~~---------------~~~~~~i~~G~~~~~~~~~~~~--------~~~~~~~~~~~ 252 (277)
T cd07378 196 LLKKYKVDAYLSGHDHNLQHIKDD---------------GSGTSFVVSGAGSKARPSVKHI--------DKVPQFFSGFT 252 (277)
T ss_pred HHHHcCCCEEEeCCcccceeeecC---------------CCCcEEEEeCCCcccCCCCCcc--------Ccccccccccc
Confidence 999999999999999999988631 2578999999888765432110 01124677788
Q ss_pred eCcccEEEEEEeCCEEEEEEEECCCC
Q 006938 506 GGEFGYTRLVATKEKLTLSYVGNHDG 531 (625)
Q Consensus 506 ~~~~Gy~~v~v~~~~L~~~~i~~~dG 531 (625)
...+||.+|+|++++|+++|+ +.+|
T Consensus 253 ~~~~Gy~~i~v~~~~l~~~~~-~~~g 277 (277)
T cd07378 253 SSGGGFAYLELTKEELTVRFY-DADG 277 (277)
T ss_pred cCCCCEEEEEEecCEEEEEEE-CCCC
Confidence 899999999999999999999 5665
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-27 Score=242.26 Aligned_cols=244 Identities=20% Similarity=0.230 Sum_probs=170.8
Q ss_pred CcceEEEEEecCCCCCCCccc---ccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch----hhHHHHHHhHHH
Q 006938 210 NETIAFLFGDMGAATPYTTFE---RTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS----WLWDEFFALIEP 282 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~---~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~----~~wd~f~~~l~~ 282 (625)
.+++|++++|+|.+.....+. .........++.+++.+++..++||||+++||+++..... .+|+.+.+.++.
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL 82 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh
Confidence 468999999999985322111 1122334456777777776667999999999999876543 345566666666
Q ss_pred hhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEE
Q 006938 283 VASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFV 362 (625)
Q Consensus 283 ~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI 362 (625)
+...+|+++++||||+..... . +....|...| +..||+|++|+++||
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~--~--------------~~~~~f~~~~-----------------g~~~y~~~~~~~~~i 129 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPT--E--------------ESIKDYRDVF-----------------GDDYFSFWVGGVFFI 129 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCC--h--------------hHHHHHHHHh-----------------CCcceEEEECCEEEE
Confidence 556799999999999852110 0 0000121122 235899999999999
Q ss_pred EEeCCccc------CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCCh--hhhHHHHHHHHHHHHHcCceE
Q 006938 363 YISTETNF------LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDA--PLRNRMLEHLEPLFVENNVTL 434 (625)
Q Consensus 363 ~LDT~~~~------~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~--~~~~~~~~~l~~l~~ky~Vdl 434 (625)
+|||.... ....+|++||+++|+++.+.+.+++||++|+|++.......+. ......+++|.++|++++|++
T Consensus 130 ~lds~~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~ 209 (262)
T cd07395 130 VLNSQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKA 209 (262)
T ss_pred EeccccccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceE
Confidence 99996432 1247899999999998754456789999999998654332211 123456789999999999999
Q ss_pred EEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEE
Q 006938 435 ALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRL 514 (625)
Q Consensus 435 vlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v 514 (625)
+|+||+|.+.+.. .+++.++++++.|..+. ....||..+
T Consensus 210 v~~GH~H~~~~~~-----------------~~g~~~~~~~~~~~~~~------------------------~~~~g~~~~ 248 (262)
T cd07395 210 VFSGHYHRNAGGR-----------------YGGLEMVVTSAIGAQLG------------------------NDKSGLRIV 248 (262)
T ss_pred EEECccccCCceE-----------------ECCEEEEEcCceecccC------------------------CCCCCcEEE
Confidence 9999999987642 14566788877775421 123699999
Q ss_pred EEeCCEEEEEEEE
Q 006938 515 VATKEKLTLSYVG 527 (625)
Q Consensus 515 ~v~~~~L~~~~i~ 527 (625)
++++++++.+|+.
T Consensus 249 ~v~~~~~~~~~~~ 261 (262)
T cd07395 249 KVTEDKIVHEYYS 261 (262)
T ss_pred EECCCceeeeeee
Confidence 9999999999883
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=221.50 Aligned_cols=272 Identities=17% Similarity=0.250 Sum_probs=172.6
Q ss_pred EEEEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHH-HHH
Q 006938 200 HSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDE-FFA 278 (625)
Q Consensus 200 ~~F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~-f~~ 278 (625)
-++.-++.++..++|+++||+|....++ |...+..+..|.+ +.++||||.+||++|+.|.....|. |-+
T Consensus 32 p~l~~p~~~dgslsflvvGDwGr~g~~n-----qs~va~qmg~ige-----~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~ 101 (336)
T KOG2679|consen 32 PRLYDPAKSDGSLSFLVVGDWGRRGSFN-----QSQVALQMGEIGE-----KLDIDFVLSTGDNFYDTGLTSENDPRFQD 101 (336)
T ss_pred hhhcCCCCCCCceEEEEEcccccCCchh-----HHHHHHHHHhHHH-----hccceEEEecCCcccccCCCCCCChhHHh
Confidence 3455555555678999999999776543 3444444444432 2478999999999999986444442 222
Q ss_pred hHHHh----hcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEE-
Q 006938 279 LIEPV----ASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYS- 353 (625)
Q Consensus 279 ~l~~~----~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYs- 353 (625)
.++.+ ..+.||+.+.||||+.++..+ ..+. +|. ....||..|.. ||-
T Consensus 102 sF~nIYT~pSLQkpWy~vlGNHDyrGnV~A---Qls~-~l~---------~~d~RW~c~rs---------------f~~~ 153 (336)
T KOG2679|consen 102 SFENIYTAPSLQKPWYSVLGNHDYRGNVEA---QLSP-VLR---------KIDKRWICPRS---------------FYVD 153 (336)
T ss_pred hhhhcccCcccccchhhhccCccccCchhh---hhhH-HHH---------hhccceecccH---------------Hhhc
Confidence 23322 246799999999999865311 1110 011 12234443321 110
Q ss_pred -----EEeCcEEEEEEeCCcc-------cC---C----ChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChh
Q 006938 354 -----FDMGVVHFVYISTETN-------FL---Q----GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAP 414 (625)
Q Consensus 354 -----fd~G~v~fI~LDT~~~-------~~---~----~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~ 414 (625)
+..-++.++++|+-.. +. + -..|+.||+..|++ +.++|+||++|||+.+.+.|+.
T Consensus 154 ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~HG~--- 227 (336)
T KOG2679|consen 154 AEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHHGP--- 227 (336)
T ss_pred ceeeeeeccccccchhhheecccccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhccCC---
Confidence 0011233334333211 10 0 25788999999998 7889999999999999887764
Q ss_pred hhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcE-EEEECCCCCCCCCCCCCCCCCCCC
Q 006938 415 LRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPV-HIVIGMAGQDWQPIWQPRPDHPDD 493 (625)
Q Consensus 415 ~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~v-yIv~G~gG~~~~~~~~~~~~~~~~ 493 (625)
..++.++|.|||++++||++++||+|+.|...- ++.++ |+++|+|...+.. ..+..
T Consensus 228 -T~eL~~~LlPiL~~n~VdlY~nGHDHcLQhis~----------------~e~~iqf~tSGagSkaw~g-----~~~~~- 284 (336)
T KOG2679|consen 228 -TKELEKQLLPILEANGVDLYINGHDHCLQHISS----------------PESGIQFVTSGAGSKAWRG-----TDHNP- 284 (336)
T ss_pred -hHHHHHHHHHHHHhcCCcEEEecchhhhhhccC----------------CCCCeeEEeeCCcccccCC-----CccCC-
Confidence 367889999999999999999999999997641 23444 5555544433321 11110
Q ss_pred CCCCCCCccceeeCcccEEEEEEeCCEEEEEEEECCCCcEEEEEEEEe
Q 006938 494 PVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILA 541 (625)
Q Consensus 494 ~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v~D~f~I~k 541 (625)
.-.|....|.-...||+.++++...+++.|+. ..|+++.+-...|
T Consensus 285 --~~~p~~lkF~YdgqGfmsv~is~~e~~vvfyD-~~G~~Lhk~~t~k 329 (336)
T KOG2679|consen 285 --EVNPKELKFYYDGQGFMSVEISHSEARVVFYD-VSGKVLHKWSTSK 329 (336)
T ss_pred --ccChhheEEeeCCCceEEEEEecceeEEEEEe-ccCceEEEeeccc
Confidence 01233345555667999999999999999995 6788887755433
|
|
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.91 E-value=9.9e-23 Score=225.46 Aligned_cols=367 Identities=16% Similarity=0.208 Sum_probs=169.1
Q ss_pred EEecCCCCceEEEEEecCC-----------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 106 LGFTEDASEMRVMFLAEDG-----------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 106 L~~~~~~~~~~V~W~T~~~-----------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
++.|+...+-.|.|..-.+ ....|++.+.+.....+..+...+- .+.++++++
T Consensus 3 vasGdp~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~~----------------~~~d~t~~v 66 (453)
T PF09423_consen 3 VASGDPTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTTT----------------AERDFTVKV 66 (453)
T ss_dssp EEEE---SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----------------GGGTTEEEE
T ss_pred ccccCCCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceecc----------------cCCCeEeec
Confidence 5677766777788864433 2344555555443322222222111 124689999
Q ss_pred EEcCCCCCcEEEEEEecCC-CCcceeEEEEcCCCCC-CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCC
Q 006938 175 VIKGLKKGVRYYYKVGSDS-KGWSETHSFVSRNEDS-NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGD 252 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~-~~~S~~~~F~T~p~~~-~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~ 252 (625)
.++||+|+|+|+||+..++ ...|.+++|+|+|... ..++|+++++.+....+ ...+. .+.+ ..
T Consensus 67 ~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~~~r~a~~SC~~~~~~~----------~~~~~----~~a~-~~ 131 (453)
T PF09423_consen 67 DVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPDPFRFAFGSCQNYEDGY----------FPAYR----RIAE-RD 131 (453)
T ss_dssp EE-S--TT-EEEEEEEE--TTEE---EEEE--TT-----EEEEEE----CCC-------------HHHH----HHTT--S
T ss_pred ccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCCCceEEEEECCCCcccCh----------HHHHH----hhhc-cC
Confidence 9999999999999999853 4678899999997653 35888888876553221 12223 3321 14
Q ss_pred CCcEEEEcCccccCCCc--------------------h-------hhHHHH--HHhHHHhhcCCceEEccCCCCCCCCCC
Q 006938 253 KPAFVSHIGDISYARGY--------------------S-------WLWDEF--FALIEPVASRVAYHVCIGNHEYDWPLQ 303 (625)
Q Consensus 253 ~pdfvl~~GDivy~~g~--------------------~-------~~wd~f--~~~l~~~~~~iP~~~v~GNHD~~~~~~ 303 (625)
+|||+||+||++|.+.. . ..|..+ ...++.+.+.+|+++++.+||+..+..
T Consensus 132 ~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~ 211 (453)
T PF09423_consen 132 DPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWW 211 (453)
T ss_dssp --SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-B
T ss_pred CCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceeccccc
Confidence 89999999999998842 0 112222 234566788999999999999963210
Q ss_pred CCCCCCCCCc-cCCCCCCc----cccccccccc-cCCCCCCCCCCCCCCCCCceEEEEeCc-EEEEEEeCCcccC-----
Q 006938 304 PWKPDWSYTV-YGTDGGGE----CGVPYSLKFH-MPGNSLEPTGTRAPATRNLYYSFDMGV-VHFVYISTETNFL----- 371 (625)
Q Consensus 304 ~~~~~~~~~~-Y~~d~gge----~~~~y~~~f~-~P~~~~~~~G~~~~~~~~~yYsfd~G~-v~fI~LDT~~~~~----- 371 (625)
.... ......+. ...++...+. +|.....+.+ .....|++|.+|+ +.|++||+.....
T Consensus 212 ------~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~----~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~ 281 (453)
T PF09423_consen 212 ------GDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPG----DQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCD 281 (453)
T ss_dssp ------TTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-BT----TB----EEEEETTTEEEEE--SSSS----CCC
T ss_pred ------CCccccccccccchHHHHHHHHHHHHhhcCccCCCccC----CCCceEEEEecCCceeEEEEechhcccccccc
Confidence 0000 00000000 0011222221 3432110001 1245799999999 9999999874221
Q ss_pred ----------------CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCC---------CCChhhhHHHHHHHHHH
Q 006938 372 ----------------QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNE---------NRDAPLRNRMLEHLEPL 426 (625)
Q Consensus 372 ----------------~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~---------~~d~~~~~~~~~~l~~l 426 (625)
.|.+|++||++.|++ +.++|+||+.-.|+...... .+.+......|++|..+
T Consensus 282 ~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~ 358 (453)
T PF09423_consen 282 GPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDF 358 (453)
T ss_dssp SSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHH
T ss_pred ccccccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHH
Confidence 268999999999997 55899999998887654322 23345556678999999
Q ss_pred HHHcCce--EEEEcCccCceeeeccCCccccCCCCCCCCCCCCc-EEEEECCCCCCCCCC-CCCCCCCCCCCCCCCCCcc
Q 006938 427 FVENNVT--LALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFP-VHIVIGMAGQDWQPI-WQPRPDHPDDPVFPQPMRS 502 (625)
Q Consensus 427 ~~ky~Vd--lvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~-vyIv~G~gG~~~~~~-~~~~~~~~~~~~~~~p~ws 502 (625)
|.+.++. ++|+|++|.........+..-.... ...+ +-+++++=.+..... ..+. .... .....++.
T Consensus 359 l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~~~------~~~~~~Ef~~s~vts~~~~~~~~~~--~~~~-~~~~np~~ 429 (453)
T PF09423_consen 359 LRESGIRNVVFLSGDVHASAASRIPPDDADPPDG------PGSVGVEFTSSSVTSPGFGLGTSPA--LDRA-LDKANPHL 429 (453)
T ss_dssp HHHTT---EEEEE-SSSSEEEEEEESSTT---TT------S-EEEEEEE---SSTT-S-BSB-TT--HHH--HHHH-TTE
T ss_pred HHhhCCCCEEEEecCcchheeeecccccccccCC------CCCeEEEEECCCccCCCcccccchh--hhhh-hhhcCCce
Confidence 9988875 7899999997665432221100000 0112 233333211111000 0000 0000 00112344
Q ss_pred cee-eCcccEEEEEEeCCEEEEEE
Q 006938 503 LYR-GGEFGYTRLVATKEKLTLSY 525 (625)
Q Consensus 503 ~~~-~~~~Gy~~v~v~~~~L~~~~ 525 (625)
.|. ...+||+.|++++++++++|
T Consensus 430 ~~~~~~~~G~~~i~~~~~~~~~~~ 453 (453)
T PF09423_consen 430 KFADLRNFGYVEIDITPERVTAEW 453 (453)
T ss_dssp EEEE-B-EEEEEEEEETTEEEEEE
T ss_pred EEeECCCCcEEEEEEccceEEEEC
Confidence 444 47899999999999999876
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.4e-23 Score=214.89 Aligned_cols=301 Identities=17% Similarity=0.216 Sum_probs=205.5
Q ss_pred CCc-eeEEEEecCCCCceEEEEEecC--------CCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCc
Q 006938 99 TGP-RAGALGFTEDASEMRVMFLAED--------GEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPG 169 (625)
Q Consensus 99 ~~P-~qv~L~~~~~~~~~~V~W~T~~--------~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~ 169 (625)
.-| .+.-++.++....-.|.|..-+ ++...+||+++++..+.+..++..+- ...+
T Consensus 35 ~rpaF~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a~----------------p~~d 98 (522)
T COG3540 35 GRPAFTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIAS----------------PELD 98 (522)
T ss_pred CCCccccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccCC----------------cccC
Confidence 346 7888888888788889998665 56678999988875433322222111 1246
Q ss_pred eEEEEEEcCCCCCcEEEEEEecCCCCcceeEEEEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHH
Q 006938 170 WIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEA 249 (625)
Q Consensus 170 ~~h~a~ltgL~PgT~Y~YrV~~~~~~~S~~~~F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~ 249 (625)
+.+++.++||+|++.|+||+...+ ..|.+++|+|+|..+...+++.|||..|......+ .. +.+.|.
T Consensus 99 htv~v~~~gL~P~~~yfYRf~~~~-~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy-------~~----aY~~ma- 165 (522)
T COG3540 99 HTVHVDLRGLSPDQDYFYRFKAGD-ERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGY-------MT----AYKTMA- 165 (522)
T ss_pred ceEEEeccCCCCCceEEEEEeeCC-ccccccccccCCCCCCcchhhhhhhccccccccch-------hH----HHHHHH-
Confidence 889999999999999999999864 67899999999998888999999999887643211 11 233343
Q ss_pred hCCCCcEEEEcCccccCCCch-----------------------------hhHHHH--HHhHHHhhcCCceEEccCCCCC
Q 006938 250 LGDKPAFVSHIGDISYARGYS-----------------------------WLWDEF--FALIEPVASRVAYHVCIGNHEY 298 (625)
Q Consensus 250 ~~~~pdfvl~~GDivy~~g~~-----------------------------~~wd~f--~~~l~~~~~~iP~~~v~GNHD~ 298 (625)
+.+|||+||.||.+|+.+.. .+|..+ .+.++...+..||++.+.+||.
T Consensus 166 -~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv 244 (522)
T COG3540 166 -KEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEV 244 (522)
T ss_pred -hcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccc
Confidence 35799999999999987521 122222 2345667789999999999999
Q ss_pred CCCCCCCCCCCCCCccCCCC-CCc------ccccccccc-ccCCCCCCCCCCCCCCCCCceEEEEeCc-EEEEEEeCCcc
Q 006938 299 DWPLQPWKPDWSYTVYGTDG-GGE------CGVPYSLKF-HMPGNSLEPTGTRAPATRNLYYSFDMGV-VHFVYISTETN 369 (625)
Q Consensus 299 ~~~~~~~~~~~~~~~Y~~d~-gge------~~~~y~~~f-~~P~~~~~~~G~~~~~~~~~yYsfd~G~-v~fI~LDT~~~ 369 (625)
.++ |.+..-..|+ -.+ ...+++.++ .||...... |.....|.+|.||+ ..|.+||+..+
T Consensus 245 ~NN-------~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~-----p~~~~lYR~~tyG~La~~~~LDtR~Y 312 (522)
T COG3540 245 ANN-------WSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSL-----PTDGRLYRSFTYGPLADLFVLDTRSY 312 (522)
T ss_pred ccc-------ccccccccCCCCChHHHHHHHHHHHHHHHHhCccccccC-----Cccceeeeeeccccccceeeeehhhh
Confidence 753 2221111111 011 112233333 367543210 11346899999999 67999999743
Q ss_pred cC----------------------CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCC-----------CChhhh
Q 006938 370 FL----------------------QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNEN-----------RDAPLR 416 (625)
Q Consensus 370 ~~----------------------~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~-----------~d~~~~ 416 (625)
.. .|+.|.+||+..|.+ +++.|+|+....|+-...... +.++..
T Consensus 313 R~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy 389 (522)
T COG3540 313 RTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGY 389 (522)
T ss_pred ccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCC
Confidence 31 268999999999998 789999999988874221111 112233
Q ss_pred HHHHHHHHHHHHHcCce--EEEEcCccCce
Q 006938 417 NRMLEHLEPLFVENNVT--LALWGHVHRYE 444 (625)
Q Consensus 417 ~~~~~~l~~l~~ky~Vd--lvlsGH~H~ye 444 (625)
..-|+.|...+...++. ++|+|++|..-
T Consensus 390 ~~~RerLl~fi~~~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 390 PAGRERLLRFIADRKIRNTVVLTGDVHYSW 419 (522)
T ss_pred cccHHHHHHHHHhcCCCCcEEEechhHHHH
Confidence 44588999999998876 89999999743
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=197.45 Aligned_cols=209 Identities=17% Similarity=0.177 Sum_probs=142.6
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
||++++|.|.+...... .........++.+++.+++...+|||||++||+++... ...|+.+.+.++.+ .+|++.+
T Consensus 1 r~~~iSDlH~~~~~~~~-~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~~--~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGA-LLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS-PESYERLRELLAAL--PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcce-ecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC-HHHHHHHHHHHhhc--CCCEEEe
Confidence 58999999987532100 00112345677788877765569999999999997643 44566666666554 8999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCccc--
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNF-- 370 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~-- 370 (625)
+||||.... +...|..... .....+|+|+.++++||+||+....
T Consensus 77 ~GNHD~~~~------------------------~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~lds~~~~~~ 122 (240)
T cd07402 77 PGNHDDRAA------------------------MRAVFPELPP----------APGFVQYVVDLGGWRLILLDSSVPGQH 122 (240)
T ss_pred CCCCCCHHH------------------------HHHhhccccc----------cccccceeEecCCEEEEEEeCCCCCCc
Confidence 999997411 1111110000 0134688999999999999986421
Q ss_pred --CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc-CceEEEEcCccCceeee
Q 006938 371 --LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN-NVTLALWGHVHRYERFC 447 (625)
Q Consensus 371 --~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky-~VdlvlsGH~H~yeR~~ 447 (625)
....+|++||++.|++.. ..++|+++|+|++.......+. .....++.+.+++.++ +|+++|+||.|......
T Consensus 123 ~~~~~~~ql~wL~~~L~~~~---~~~~il~~H~pp~~~~~~~~~~-~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~ 198 (240)
T cd07402 123 GGELCAAQLDWLEAALAEAP---DKPTLVFLHHPPFPVGIAWMDA-IGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS 198 (240)
T ss_pred CCEECHHHHHHHHHHHHhCC---CCCEEEEECCCCccCCchhhhh-hhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE
Confidence 135789999999999854 3458899999987654311111 1112267899999999 99999999999976543
Q ss_pred ccCCccccCCCCCCCCCCCCcEEEEECCCCCCC
Q 006938 448 PLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDW 480 (625)
Q Consensus 448 p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~ 480 (625)
.+++.++++|+.|..+
T Consensus 199 -----------------~~g~~~~~~gs~~~~~ 214 (240)
T cd07402 199 -----------------WGGIPLLTAPSTCHQF 214 (240)
T ss_pred -----------------ECCEEEEEcCcceeee
Confidence 2667788888877754
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-21 Score=199.14 Aligned_cols=209 Identities=18% Similarity=0.199 Sum_probs=136.4
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch--hhHHHHHHhHHHhhcCCce
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS--WLWDEFFALIEPVASRVAY 289 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~--~~wd~f~~~l~~~~~~iP~ 289 (625)
++|++++|+|.......-......+...++.+++.+++ .+|||||++||+++.+... ..|+.+.+.+..+ .+|+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~--~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~ 76 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNR--ESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPV 76 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHc--CCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCE
Confidence 58999999995542211011112344566667777654 4699999999999755421 3455555444433 5899
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcc
Q 006938 290 HVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETN 369 (625)
Q Consensus 290 ~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~ 369 (625)
++++||||...... .+.. +.... ..+..||+|++++++||+||+...
T Consensus 77 ~~v~GNHD~~~~~~---------------------~~~~-~~~~~-----------~~~~~yysf~~~~~~~i~lds~~~ 123 (267)
T cd07396 77 HHVLGNHDLYNPSR---------------------EYLL-LYTLL-----------GLGAPYYSFSPGGIRFIVLDGYDI 123 (267)
T ss_pred EEecCccccccccH---------------------hhhh-ccccc-----------CCCCceEEEecCCcEEEEEeCCcc
Confidence 99999999863210 0000 00000 123469999999999999998521
Q ss_pred ----------------------------------cCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhh
Q 006938 370 ----------------------------------FLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPL 415 (625)
Q Consensus 370 ----------------------------------~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~ 415 (625)
-....+|++||+++|+++..+ ..++||++|+|++...... ..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~-~~~viV~~Hhp~~~~~~~~-~~-- 199 (267)
T cd07396 124 SALGRPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADAN-GEKVIIFSHFPLHPESTSP-HG-- 199 (267)
T ss_pred ccccCCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhc-CCeEEEEEeccCCCCCCCc-cc--
Confidence 012479999999999986432 3458999999997654311 11
Q ss_pred hHHHHHHHHHHHHHc-CceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCC
Q 006938 416 RNRMLEHLEPLFVEN-NVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQ 478 (625)
Q Consensus 416 ~~~~~~~l~~l~~ky-~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~ 478 (625)
....++.+.+++.++ +|+++|+||+|.++... .+|+.|+++|+-..
T Consensus 200 ~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~-----------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 200 LLWNHEEVLSILRAYGCVKACISGHDHEGGYAQ-----------------RHGIHFLTLEGMVE 246 (267)
T ss_pred cccCHHHHHHHHHhCCCEEEEEcCCcCCCCccc-----------------cCCeeEEEechhhc
Confidence 111256788999996 89999999999987442 26777888875443
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=185.42 Aligned_cols=250 Identities=13% Similarity=0.064 Sum_probs=150.4
Q ss_pred EEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHH
Q 006938 202 FVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIE 281 (625)
Q Consensus 202 F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~ 281 (625)
.+|.+...++++|+.++|+|........ .........++.+++.+++...+|||||++||++... ....++.+.+.++
T Consensus 5 ~~~~~~~~~~~~i~~iSD~Hl~~~~~~~-~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~-~~~~~~~~~~~l~ 82 (275)
T PRK11148 5 LTLPLAGEARVRILQITDTHLFADEHET-LLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDH-SSEAYQHFAEGIA 82 (275)
T ss_pred cccccCCCCCEEEEEEcCcccCCCCCCc-eeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCC-CHHHHHHHHHHHh
Confidence 4555555677999999999974321100 0011234567777877776667899999999999754 3456666766665
Q ss_pred HhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEE
Q 006938 282 PVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHF 361 (625)
Q Consensus 282 ~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~f 361 (625)
.+ .+|+++++||||.... +...+. .. + ....++.+..++++|
T Consensus 83 ~l--~~Pv~~v~GNHD~~~~------------------------~~~~~~--~~-----~-----~~~~~~~~~~~~~~~ 124 (275)
T PRK11148 83 PL--RKPCVWLPGNHDFQPA------------------------MYSALQ--DA-----G-----ISPAKHVLIGEHWQI 124 (275)
T ss_pred hc--CCcEEEeCCCCCChHH------------------------HHHHHh--hc-----C-----CCccceEEecCCEEE
Confidence 54 6899999999998421 111111 00 0 011233344556999
Q ss_pred EEEeCCccc----CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc-CceEEE
Q 006938 362 VYISTETNF----LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN-NVTLAL 436 (625)
Q Consensus 362 I~LDT~~~~----~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky-~Vdlvl 436 (625)
|+|||...- ..+.+|++||+++|++.. + +.+||++|||+........+. ......++|.+++++| +|+++|
T Consensus 125 i~Lds~~~g~~~G~l~~~ql~wL~~~L~~~~-~--~~~vv~~hH~P~~~~~~~~d~-~~l~n~~~l~~ll~~~~~v~~vl 200 (275)
T PRK11148 125 LLLDSQVFGVPHGELSEYQLEWLERKLADAP-E--RHTLVLLHHHPLPAGCAWLDQ-HSLRNAHELAEVLAKFPNVKAIL 200 (275)
T ss_pred EEecCCCCCCcCCEeCHHHHHHHHHHHhhCC-C--CCeEEEEcCCCCCCCcchhhc-cCCCCHHHHHHHHhcCCCceEEE
Confidence 999986321 235899999999998853 2 224555555443322211110 0111246899999998 899999
Q ss_pred EcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEE
Q 006938 437 WGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVA 516 (625)
Q Consensus 437 sGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v 516 (625)
+||+|...... .+|+.++++++.+..+.+. .... .......||..+++
T Consensus 201 ~GH~H~~~~~~-----------------~~gi~~~~~ps~~~q~~~~--------------~~~~-~~~~~~~g~~~~~l 248 (275)
T PRK11148 201 CGHIHQELDLD-----------------WNGRRLLATPSTCVQFKPH--------------CTNF-TLDTVAPGWRELEL 248 (275)
T ss_pred ecccChHHhce-----------------ECCEEEEEcCCCcCCcCCC--------------CCcc-ccccCCCcEEEEEE
Confidence 99999854321 2566677777665433211 0000 11123468999988
Q ss_pred e-CCEEEEEEEE
Q 006938 517 T-KEKLTLSYVG 527 (625)
Q Consensus 517 ~-~~~L~~~~i~ 527 (625)
+ ++.+..+.++
T Consensus 249 ~~~g~~~~~~~~ 260 (275)
T PRK11148 249 HADGSLETEVHR 260 (275)
T ss_pred cCCCcEEEEEEE
Confidence 5 4456666654
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-18 Score=172.99 Aligned_cols=161 Identities=20% Similarity=0.213 Sum_probs=115.4
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh-cCCceE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA-SRVAYH 290 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~-~~iP~~ 290 (625)
++|++++|+|..... ........++++++.+++ .+||+|+++||+++......+|+.+.+.++.+. ..+|++
T Consensus 1 f~~~~~~D~q~~~~~-----~~~~~~~~~~~i~~~~~~--~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 73 (214)
T cd07399 1 FTLAVLPDTQYYTES-----YPEVFDAQTDWIVDNAEA--LNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYS 73 (214)
T ss_pred CEEEEecCCCcCCcC-----CHHHHHHHHHHHHHHHHH--cCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEE
Confidence 589999999986431 112223455666666543 589999999999987655678998888888776 679999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCccc
Q 006938 291 VCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNF 370 (625)
Q Consensus 291 ~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~ 370 (625)
+++||||.. +.+|+.
T Consensus 74 ~~~GNHD~~--------------------------------------------------------------~~ld~~--- 88 (214)
T cd07399 74 VLAGNHDLV--------------------------------------------------------------LALEFG--- 88 (214)
T ss_pred EECCCCcch--------------------------------------------------------------hhCCCC---
Confidence 999999952 111111
Q ss_pred CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChh---hhHHHHHHHHHHHHHc-CceEEEEcCccCceee
Q 006938 371 LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAP---LRNRMLEHLEPLFVEN-NVTLALWGHVHRYERF 446 (625)
Q Consensus 371 ~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~---~~~~~~~~l~~l~~ky-~VdlvlsGH~H~yeR~ 446 (625)
...+|++||++.|++.. ..++||++|+|++.......... ......+.|.+++++| +|+++|+||.|.+.+.
T Consensus 89 -~~~~ql~WL~~~L~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~ 164 (214)
T cd07399 89 -PRDEVLQWANEVLKKHP---DRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRT 164 (214)
T ss_pred -CCHHHHHHHHHHHHHCC---CCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceE
Confidence 23789999999999743 23589999999987543222110 0122345788999999 7999999999999877
Q ss_pred ec
Q 006938 447 CP 448 (625)
Q Consensus 447 ~p 448 (625)
..
T Consensus 165 ~~ 166 (214)
T cd07399 165 TL 166 (214)
T ss_pred EE
Confidence 53
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.3e-19 Score=179.47 Aligned_cols=193 Identities=18% Similarity=0.270 Sum_probs=122.7
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC--------chhhHHHHHHhHHHhh-
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG--------YSWLWDEFFALIEPVA- 284 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g--------~~~~wd~f~~~l~~~~- 284 (625)
|+.++|.|.+.... .......+.+++.+++ .+||+|+++||++.... ...+|+.|++.+....
T Consensus 2 ~~~iSDlH~g~~~~------~~~~~~~~~~~~~i~~--~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (256)
T cd07401 2 FVHISDIHVSSFHP------PNRAQDETFCSNFIDV--IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSV 73 (256)
T ss_pred EEEecccccCCcCc------hhhhhHHHHHHHHHHh--hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCC
Confidence 67899999875321 1111111334444544 48999999999986432 2457888888765543
Q ss_pred -cCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccc-ccCCCCCCCCCCCCCCCCCceEE--EEeCcEE
Q 006938 285 -SRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKF-HMPGNSLEPTGTRAPATRNLYYS--FDMGVVH 360 (625)
Q Consensus 285 -~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f-~~P~~~~~~~G~~~~~~~~~yYs--fd~G~v~ 360 (625)
...|++.++||||+.+.. ..+. ...|..+| ..... ...+|. +..|+++
T Consensus 74 ~~~~p~~~v~GNHD~~~~~------------~~~~----~~~~~~~y~~~~~~------------~~~~~~~~~~~~~~~ 125 (256)
T cd07401 74 INKEKWFDIRGNHDLFNIP------------SLDS----ENNYYRKYSATGRD------------GSFSFSHTTRFGNYS 125 (256)
T ss_pred CCcceEEEeCCCCCcCCCC------------Cccc----hhhHHHHhheecCC------------CccceEEEecCCCEE
Confidence 268999999999995321 0000 00111112 11100 112333 3459999
Q ss_pred EEEEeCCcc----------cCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc
Q 006938 361 FVYISTETN----------FLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN 430 (625)
Q Consensus 361 fI~LDT~~~----------~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky 430 (625)
||+|||... ....++|++||+++|++.. +.+++||++|+|++....... . ....+.++|+++
T Consensus 126 ~I~Ldt~~~~~~~~~~~~~g~l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~~-----~-~~~~~~~ll~~~ 197 (256)
T cd07401 126 FIGVDPTLFPGPKRPFNFFGSLDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPSA-----K-SSSKFKDLLKKY 197 (256)
T ss_pred EEEEcCccCCCCCCCCceeccCCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCCc-----c-hhHHHHHHHHhc
Confidence 999999632 1134899999999998753 345799999999965332211 1 122389999999
Q ss_pred CceEEEEcCccCceeeeccC
Q 006938 431 NVTLALWGHVHRYERFCPLN 450 (625)
Q Consensus 431 ~VdlvlsGH~H~yeR~~p~~ 450 (625)
+|+++||||.|.+++..|+-
T Consensus 198 ~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 198 NVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred CCcEEEeCCccCCCcceeee
Confidence 99999999999999866653
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-18 Score=179.95 Aligned_cols=201 Identities=18% Similarity=0.236 Sum_probs=132.0
Q ss_pred EEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchh--------hHHHHHHhHHHhhcC
Q 006938 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSW--------LWDEFFALIEPVASR 286 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~--------~wd~f~~~l~~~~~~ 286 (625)
.-+|+.+|..+ ...++.+++.+++...+|||||++||++..+.... .+..+++.++.....
T Consensus 41 ~~~G~~~CD~p-----------~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 109 (296)
T cd00842 41 GPWGDYGCDSP-----------WRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPD 109 (296)
T ss_pred CCCcCcCCCCc-----------HHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCC
Confidence 34788888764 35677777777776679999999999998764321 244556667666788
Q ss_pred CceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccc--cCCCCCCCCCCCCCCCCCceEEEE-eCcEEEEE
Q 006938 287 VAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFH--MPGNSLEPTGTRAPATRNLYYSFD-MGVVHFVY 363 (625)
Q Consensus 287 iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~--~P~~~~~~~G~~~~~~~~~yYsfd-~G~v~fI~ 363 (625)
+|+++++||||...... +.+. +... .....+...|. +|..... ....+.||++. .++++||+
T Consensus 110 ~pv~~~~GNHD~~p~~~-~~~~-----~~~~---~~~~~~~~~w~~~l~~~~~~------~~~~ggYY~~~~~~~l~vI~ 174 (296)
T cd00842 110 TPVYPALGNHDSYPVNQ-FPPN-----NSPS---WLYDALAELWKSWLPEEAEE------TFKKGGYYSVPVKPGLRVIS 174 (296)
T ss_pred CCEEEcCCCCCCCcccc-cCCc-----cccc---HHHHHHHHHHHhhcCHHHHH------HhhcceEEEEEcCCCeEEEE
Confidence 99999999999863221 1000 0000 00000111221 2211100 01134689998 88999999
Q ss_pred EeCCccc-----------CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcC-
Q 006938 364 ISTETNF-----------LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENN- 431 (625)
Q Consensus 364 LDT~~~~-----------~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~- 431 (625)
|||.... .....|++||+++|+++++.+ ..++|++|+|++....... ....++|.+|+++|.
T Consensus 175 Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~~-----~~~~~~~~~ii~~y~~ 248 (296)
T cd00842 175 LNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQAG-EKVWIIGHIPPGVNSYDTL-----ENWSERYLQIINRYSD 248 (296)
T ss_pred EeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHCC-CeEEEEeccCCCCcccccc-----hHHHHHHHHHHHHHHH
Confidence 9996321 124789999999999875433 3478889999987543221 344678999999996
Q ss_pred -ceEEEEcCccCceeee
Q 006938 432 -VTLALWGHVHRYERFC 447 (625)
Q Consensus 432 -VdlvlsGH~H~yeR~~ 447 (625)
|.++|+||+|..+...
T Consensus 249 ~i~~~~~GH~H~d~~~~ 265 (296)
T cd00842 249 TIAGQFFGHTHRDEFRV 265 (296)
T ss_pred hhheeeecccccceEEE
Confidence 7789999999976553
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-16 Score=161.32 Aligned_cols=162 Identities=16% Similarity=0.155 Sum_probs=102.1
Q ss_pred CCCcEEEEcCccccCCC--chhhHHHHHHhHHHhh----cCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccc
Q 006938 252 DKPAFVSHIGDISYARG--YSWLWDEFFALIEPVA----SRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVP 325 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g--~~~~wd~f~~~l~~~~----~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~ 325 (625)
.+||+||++||+++.+. ...+|.+.++.+..+. ..+|++.++||||+....... ......
T Consensus 44 l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~--------------~~~~~r 109 (257)
T cd08163 44 LKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV--------------LPVRQR 109 (257)
T ss_pred cCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC--------------HHHHHH
Confidence 58999999999987643 2345554344433332 247999999999985321000 000012
Q ss_pred cccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcc-----cCCChHHHHHHHHHhhccccCCCCeEEEEcc
Q 006938 326 YSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETN-----FLQGSNQYNFIKHDLESVDRKKTPFVVVQGH 400 (625)
Q Consensus 326 y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~-----~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H 400 (625)
|.+.| +..+|+|++|+++||+|||... ......|.+||++.|+.... ..+ +||++|
T Consensus 110 f~~~F-----------------g~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~p-~ILl~H 170 (257)
T cd08163 110 FEKYF-----------------GPTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK-SKP-RILLTH 170 (257)
T ss_pred HHHHh-----------------CCCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC-CCc-EEEEec
Confidence 33334 1236889999999999999631 12346799999999986432 233 899999
Q ss_pred cCCccCCCCC------CCh------hh-hH-HH-HHHHHHHHHHcCceEEEEcCccCceee
Q 006938 401 RPMYTTSNEN------RDA------PL-RN-RM-LEHLEPLFVENNVTLALWGHVHRYERF 446 (625)
Q Consensus 401 ~P~y~~~~~~------~d~------~~-~~-~~-~~~l~~l~~ky~VdlvlsGH~H~yeR~ 446 (625)
+|+|...... ... .. .+ .+ .+.-..||.+.++.+||+||+|.|=..
T Consensus 171 ~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 171 VPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred cccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 9999654210 000 00 00 01 234446778889999999999998554
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-15 Score=142.09 Aligned_cols=198 Identities=23% Similarity=0.248 Sum_probs=100.7
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHH-HhHHHhhcCCceE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFF-ALIEPVASRVAYH 290 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~-~~l~~~~~~iP~~ 290 (625)
+||+++||+|..... ... ....+.+.. ...++|+||++||+++.+.....+.... .........+|++
T Consensus 1 ~ri~~isD~H~~~~~--------~~~-~~~~~~~~~--~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (200)
T PF00149_consen 1 MRILVISDLHGGYDD--------DSD-AFRKLDEIA--AENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVY 69 (200)
T ss_dssp EEEEEEEBBTTTHHH--------HCH-HHHHHHHHH--HHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEE
T ss_pred CeEEEEcCCCCCCcc--------hhH-HHHHHHHHh--ccCCCCEEEeeccccccccccccchhhhccchhhhhcccccc
Confidence 489999999987421 001 112222222 2479999999999999876554444332 1233456789999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccccc-CCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcc
Q 006938 291 VCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHM-PGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETN 369 (625)
Q Consensus 291 ~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~-P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~ 369 (625)
+++||||+...... +. .......... ....... ..... .........+...+....
T Consensus 70 ~~~GNHD~~~~~~~---------~~-------~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~ 126 (200)
T PF00149_consen 70 FILGNHDYYSGNSF---------YG-------FYDYQFEDYYGNYNYYYS------YFNNK-VIFDNDNFWFNSGNNEYP 126 (200)
T ss_dssp EEE-TTSSHHHHHH---------HH-------HHHHHHSSEEECSSEEEC------TESSE-EEEEETTEEEEEHCCHTH
T ss_pred ccccccccceeccc---------cc-------cccccccccccccccccc------cCcce-eeeccccccccccccccc
Confidence 99999998521000 00 0000000000 0000000 00000 111122222222221111
Q ss_pred cCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCc
Q 006938 370 FLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRY 443 (625)
Q Consensus 370 ~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~y 443 (625)
......+..|+...+....+...+++||++|+|++...............++.+..++.+++|+++|+||+|.|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 127 DYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccchhcccccccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 11122222332222222223456789999999999876543210001234678899999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.1e-14 Score=141.83 Aligned_cols=207 Identities=14% Similarity=0.104 Sum_probs=122.9
Q ss_pred EEEEEecCCCCCC-CcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 214 AFLFGDMGAATPY-TTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 214 f~v~GD~g~~~~~-~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++|.|..... .+.........+.++.+.+.++++.++||+||++||+++... .......++.++.+ ..|++++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~-~~~~~~~l~~l~~l--~~~v~~V 77 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK-LEEAKLDLAWIDAL--PGTKVLL 77 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC-hHHHHHHHHHHHhC--CCCeEEE
Confidence 3678999977421 000011223345566666666666679999999999985432 22222333333332 3578999
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc----
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET---- 368 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~---- 368 (625)
+||||+.... . ..+.+.+ +.. +. ......++.++++.|+.++...
T Consensus 78 ~GNHD~~~~~-----------~---------~~~~~~l--~~~-----~~----~~~~n~~~~~~~i~i~G~~~~~~~~~ 126 (232)
T cd07393 78 KGNHDYWWGS-----------A---------SKLRKAL--EES-----RL----ALLFNNAYIDDDVAICGTRGWDNPGN 126 (232)
T ss_pred eCCccccCCC-----------H---------HHHHHHH--Hhc-----Ce----EEeccCcEEECCEEEEEEEeeCCCCC
Confidence 9999983110 0 0011111 110 00 0001234567889999876311
Q ss_pred cc----------CC---ChHHHHHHHHHhhccccCC-CCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceE
Q 006938 369 NF----------LQ---GSNQYNFIKHDLESVDRKK-TPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTL 434 (625)
Q Consensus 369 ~~----------~~---~~~Q~~WL~~~L~~~~r~~-~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~Vdl 434 (625)
.. .. ...|++||++.|+++.... ..++|+++|+|++..... .+.+..+++++++++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~----------~~~~~~~~~~~~v~~ 196 (232)
T cd07393 127 PWPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD----------DSPISKLIEEYGVDI 196 (232)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC----------HHHHHHHHHHcCCCE
Confidence 10 00 2569999999999764322 246899999998765321 135678888999999
Q ss_pred EEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCC
Q 006938 435 ALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMA 476 (625)
Q Consensus 435 vlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~g 476 (625)
+|+||+|.+++..|+... .+++.|+.+.++
T Consensus 197 vl~GH~H~~~~~~~~~~~------------~~gi~~~~~~~~ 226 (232)
T cd07393 197 CVYGHLHGVGRDRAINGE------------RGGIRYQLVSAD 226 (232)
T ss_pred EEECCCCCCcccccccce------------ECCEEEEEEcch
Confidence 999999999988776432 256667666544
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.58 E-value=3e-14 Score=153.99 Aligned_cols=96 Identities=26% Similarity=0.376 Sum_probs=71.9
Q ss_pred CCceEEEE-eCcEEEEEEeCCccc-----CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCCh---hhhHH
Q 006938 348 RNLYYSFD-MGVVHFVYISTETNF-----LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDA---PLRNR 418 (625)
Q Consensus 348 ~~~yYsfd-~G~v~fI~LDT~~~~-----~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~---~~~~~ 418 (625)
+..||+|+ .++++||+|||.... ...++|++||+++|++. +.+++||++|||++.......+. .....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 899999999996321 23589999999999973 34569999999998754322110 00112
Q ss_pred HHHHHHHHHHHc-CceEEEEcCccCceee
Q 006938 419 MLEHLEPLFVEN-NVTLALWGHVHRYERF 446 (625)
Q Consensus 419 ~~~~l~~l~~ky-~VdlvlsGH~H~yeR~ 446 (625)
..++|.++|.+| +|.++|+||.|.....
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 346899999998 8999999999987644
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.2e-13 Score=133.25 Aligned_cols=164 Identities=17% Similarity=0.195 Sum_probs=99.9
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchh-hHHHHHHhHHHhh-cCCc
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSW-LWDEFFALIEPVA-SRVA 288 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~-~wd~f~~~l~~~~-~~iP 288 (625)
.+++++++|+|......... .......+.+.+.+.++ ..+|||||++||+++...... .+..+.+.++++. ..+|
T Consensus 2 ~~ki~~isDlH~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p 78 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCE-GCEADLKTVAFIERVLD--AEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIP 78 (199)
T ss_pred ceEEEEEeeecccCCCCCCC-cchhhHHHHHHHHHHHh--hcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCC
Confidence 47899999999875421100 00011233444433333 358999999999998765432 2333444444443 4799
Q ss_pred eEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc
Q 006938 289 YHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET 368 (625)
Q Consensus 289 ~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~ 368 (625)
+++++||||.. |
T Consensus 79 ~~~~~GNHD~~-----------------------------------------g--------------------------- 90 (199)
T cd07383 79 WAATFGNHDGY-----------------------------------------D--------------------------- 90 (199)
T ss_pred EEEECccCCCC-----------------------------------------C---------------------------
Confidence 99999999931 0
Q ss_pred ccCCChHHHHHHHHHhhccc--cCCCCeEEEEcccCCccCCCC----------CCChhhhHHHHHHHHH-HHHHcCceEE
Q 006938 369 NFLQGSNQYNFIKHDLESVD--RKKTPFVVVQGHRPMYTTSNE----------NRDAPLRNRMLEHLEP-LFVENNVTLA 435 (625)
Q Consensus 369 ~~~~~~~Q~~WL~~~L~~~~--r~~~~wiIV~~H~P~y~~~~~----------~~d~~~~~~~~~~l~~-l~~ky~Vdlv 435 (625)
.....|++||+++|++.. +....+.++++|+|+...... ..+..........+.. +.+..+|+++
T Consensus 91 --~l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v 168 (199)
T cd07383 91 --WIRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGV 168 (199)
T ss_pred --CCCHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEE
Confidence 012579999999999863 233456999999998653210 0010001111233434 4466799999
Q ss_pred EEcCccCceeee
Q 006938 436 LWGHVHRYERFC 447 (625)
Q Consensus 436 lsGH~H~yeR~~ 447 (625)
|+||+|.++...
T Consensus 169 ~~GH~H~~~~~~ 180 (199)
T cd07383 169 FCGHDHGNDFCG 180 (199)
T ss_pred EeCCCCCcceec
Confidence 999999987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.6e-12 Score=134.68 Aligned_cols=96 Identities=17% Similarity=0.244 Sum_probs=66.8
Q ss_pred CCceEEEE-eCcE--EEEEEeCCccc-----------CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCC-C
Q 006938 348 RNLYYSFD-MGVV--HFVYISTETNF-----------LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENR-D 412 (625)
Q Consensus 348 ~~~yYsfd-~G~v--~fI~LDT~~~~-----------~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~-d 412 (625)
+..||+|+ .|++ |||+||+.... ...++|++||+++|+.+. .+.+++|+++|+|+.+...... .
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCcccCCccchhh
Confidence 45699999 5855 99999986311 135899999999999865 2457788888888876322110 0
Q ss_pred hh---------hhH-HHHHHHHHHHHHc-CceEEEEcCccCce
Q 006938 413 AP---------LRN-RMLEHLEPLFVEN-NVTLALWGHVHRYE 444 (625)
Q Consensus 413 ~~---------~~~-~~~~~l~~l~~ky-~VdlvlsGH~H~ye 444 (625)
+. ... ....+|..+|.+| +|.++||||.|...
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~ 412 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNT 412 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccccc
Confidence 00 101 1124799999999 79899999999743
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.1e-12 Score=121.06 Aligned_cols=148 Identities=18% Similarity=0.120 Sum_probs=89.1
Q ss_pred CCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccc
Q 006938 251 GDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKF 330 (625)
Q Consensus 251 ~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f 330 (625)
..+||+||++||+++.... .....+ +.+. ...+|+++++||||..... . ......
T Consensus 21 ~~~~D~vv~~GDl~~~~~~-~~~~~~-~~l~--~~~~p~~~v~GNHD~~~~~------------~---------~~~~~~ 75 (188)
T cd07392 21 AEEADAVIVAGDITNFGGK-EAAVEI-NLLL--AIGVPVLAVPGNCDTPEIL------------G---------LLTSAG 75 (188)
T ss_pred ccCCCEEEECCCccCcCCH-HHHHHH-HHHH--hcCCCEEEEcCCCCCHHHH------------H---------hhhcCc
Confidence 3689999999999875532 222222 3332 2478999999999974110 0 000000
Q ss_pred ccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcc------cCCChHHHHHHHHHhhccccCCCCeEEEEcccCCc
Q 006938 331 HMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETN------FLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMY 404 (625)
Q Consensus 331 ~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~------~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y 404 (625)
... . -..+.++++.|+.+++... ....++|++|+ +.|.. ...+.+|+++|+|++
T Consensus 76 ~~~--------------~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~ilv~H~pp~ 135 (188)
T cd07392 76 LNL--------------H--GKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLILVTHAPPY 135 (188)
T ss_pred Eec--------------C--CCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEEEECCCCc
Confidence 000 0 1235678899999987421 12346899998 44443 223448999999997
Q ss_pred cCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 405 TTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 405 ~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
.......... ...-.+.+..++++++++++|+||.|.-.
T Consensus 136 ~~~~d~~~~~-~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 136 GTAVDRVSGG-FHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred CCcccccCCC-CccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 6311111000 00123578888999999999999999854
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.5e-12 Score=127.54 Aligned_cols=185 Identities=15% Similarity=0.139 Sum_probs=105.0
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++.++|.|.... .+ .....++.+++.+++ .++|+|+++||++... .+...+++.+... ..+|++.+
T Consensus 1 ki~~iSDlH~~~~--~~-----~~~~~l~~~~~~~~~--~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v 67 (239)
T TIGR03729 1 KIAFSSDLHIDLN--HF-----DTEEMLETLAQYLKK--QKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFN 67 (239)
T ss_pred CEEEEEeecCCCC--CC-----CHHHHHHHHHHHHHh--cCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEE
Confidence 4789999997421 11 112235556666654 4799999999998642 1223344444432 46899999
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCccc--
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNF-- 370 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~-- 370 (625)
+||||+.... . +. .+...+. +. ...+.++.+..++++|++++-..++
T Consensus 68 ~GNHD~~~~~-~----~~--------------~~~~~~~-~~-----------~l~~~~~~~~~~~~~~ig~~gw~d~~~ 116 (239)
T TIGR03729 68 AGNHDMLKDL-T----YE--------------EIESNDS-PL-----------YLHNRFIDIPNTQWRIIGNNGWYDYSF 116 (239)
T ss_pred CCCCCCCCCC-C----HH--------------HHHhccc-hh-----------hhcccccccCCCceEEEeeccceeccc
Confidence 9999984110 0 00 0000000 00 0011222233356677766621110
Q ss_pred -----------------------C------CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCC----CCCChhh-h
Q 006938 371 -----------------------L------QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSN----ENRDAPL-R 416 (625)
Q Consensus 371 -----------------------~------~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~----~~~d~~~-~ 416 (625)
. ...+|++||++.|++.. . . .+||++|+|+..... ....+.. .
T Consensus 117 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~-~-~-~~ivvtH~pP~~~~~~~~~~~~~~~~~~ 193 (239)
T TIGR03729 117 SNDKTSKEILRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQLD-N-K-QVIFVTHFVPHRDFIYVPMDHRRFDMFN 193 (239)
T ss_pred ccccCHHHHHHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhcC-C-C-CEEEEEcccchHHHhcCCCCCcchhhhh
Confidence 0 12678999999998753 2 2 288888998754211 1011110 0
Q ss_pred -HHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 417 -NRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 417 -~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
....+.|.+++++++|+++|+||.|.-.
T Consensus 194 ~~~~s~~l~~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 194 AFLGSQHFGQLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred hccChHHHHHHHHHhCCCEEEECCccCCC
Confidence 0113678899999999999999999864
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.2e-11 Score=128.09 Aligned_cols=186 Identities=18% Similarity=0.197 Sum_probs=117.5
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
.+++.++|.+.... ...+.+.+..+++.++ ..+||+||++||+++. +....++...+.++......|+++
T Consensus 1 ~~i~~isD~H~~~~-------~~~~~~~~~~~~~~i~--~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 70 (301)
T COG1409 1 MRIAHISDLHLGAL-------GVDSEELLEALLAAIE--QLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIV 70 (301)
T ss_pred CeEEEEecCccccc-------ccchHHHHHHHHHHHh--cCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEe
Confidence 36889999998831 0123445555666665 3688999999999987 555556655555654556789999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEe-CcEEEEEEeCCccc
Q 006938 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDM-GVVHFVYISTETNF 370 (625)
Q Consensus 292 v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~-G~v~fI~LDT~~~~ 370 (625)
+|||||....... .+...+.... ..+-.... ++++++.+|+....
T Consensus 71 vpGNHD~~~~~~~--------------------~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~d~~~~~ 116 (301)
T COG1409 71 VPGNHDARVVNGE--------------------AFSDQFFNRY--------------AVLVGACSSGGWRVIGLDSSVPG 116 (301)
T ss_pred eCCCCcCCchHHH--------------------HhhhhhcccC--------------cceEeeccCCceEEEEecCCCCC
Confidence 9999998632110 0111111000 01111112 67899999986432
Q ss_pred ----CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcC--ceEEEEcCccCc
Q 006938 371 ----LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENN--VTLALWGHVHRY 443 (625)
Q Consensus 371 ----~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~--VdlvlsGH~H~y 443 (625)
..+..|++||++.|++........+|+++|+|+.......... .......+..++..++ |+++|+||.|.-
T Consensus 117 ~~~G~~~~~q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 117 VPLGRLGAEQLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRV--ALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred CCCCEECHHHHHHHHHHHHhCccccCceEEEecCCCCCCCCCcccee--eeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 2468999999999998543211246777777776644332211 1122356667888887 999999999986
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.2e-11 Score=123.80 Aligned_cols=173 Identities=17% Similarity=0.194 Sum_probs=101.7
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
+++++++|+|..... ..+.++.+++.+++ .+||+|+++||+++...... +.+.+.++.+...+|+++
T Consensus 2 ~~i~~~sDlH~~~~~---------~~~~~~~~~~~~~~--~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 2 LRIAHLSDLHLGPFV---------SRERLERLVEKINA--LKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CEEEEEeecCCCccC---------CHHHHHHHHHHHhc--cCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 689999999987432 12345556665543 58999999999998654332 344555555556799999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcccC
Q 006938 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFL 371 (625)
Q Consensus 292 v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~~ 371 (625)
++||||+...... .+...+. .. |. .-..+.+..++.++..+.++--..
T Consensus 69 v~GNHD~~~~~~~--------------------~~~~~l~-~~------~v--~~L~~~~~~~~~~~~~i~i~G~~~--- 116 (223)
T cd07385 69 VLGNHDYYSGDEE--------------------NWIEALE-SA------GI--TVLRNESVEISVGGATIGIAGVDD--- 116 (223)
T ss_pred ECCCcccccCchH--------------------HHHHHHH-Hc------CC--EEeecCcEEeccCCeEEEEEeccC---
Confidence 9999998532100 0000000 00 00 000122444555554444332111
Q ss_pred CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCC
Q 006938 372 QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNN 451 (625)
Q Consensus 372 ~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~ 451 (625)
.....+++.+.+++.+ +.++.|++.|.|.+.. .+.+.++|++++||+|..|...|...
T Consensus 117 -~~~~~~~~~~~~~~~~--~~~~~I~l~H~P~~~~-------------------~~~~~~~dl~l~GHtHggqi~~~~~~ 174 (223)
T cd07385 117 -GLGRRPDLEKALKGLD--EDDPNILLAHQPDTAE-------------------EAAAWGVDLQLSGHTHGGQIRLPGIG 174 (223)
T ss_pred -ccccCCCHHHHHhCCC--CCCCEEEEecCCChhH-------------------HhcccCccEEEeccCCCCEEeccccc
Confidence 1122345666666543 3446899999875321 11457999999999999998876553
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.9e-11 Score=113.83 Aligned_cols=127 Identities=20% Similarity=0.231 Sum_probs=85.9
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcC-CceEEc
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASR-VAYHVC 292 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~-iP~~~v 292 (625)
++.++|.+.+...... .......++.+++.++ ..+||+|+++||+++... ..+|+.+.+.++.+... +|++.+
T Consensus 1 il~isD~Hl~~~~~~~---~~~~~~~l~~~~~~~~--~~~~d~vi~~GDl~~~~~-~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPE---LLALLSLLDRLLAEIK--ALDPDLVVITGDLTQRGL-PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchh---HHHHHHHHHHHHHHHh--ccCCCEEEECCCCCCCCC-HHHHHHHHHHHHHccccCCcEEEe
Confidence 4678999987542110 0111111334454444 358999999999998653 45666666666655433 699999
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcccCC
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQ 372 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~~~ 372 (625)
+|||| .
T Consensus 75 ~GNHD-----------------------------------------------------~--------------------- 80 (144)
T cd07400 75 PGNHD-----------------------------------------------------V--------------------- 80 (144)
T ss_pred CCCCe-----------------------------------------------------E---------------------
Confidence 99999 0
Q ss_pred ChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceee
Q 006938 373 GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERF 446 (625)
Q Consensus 373 ~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~ 446 (625)
|+++|+|++........... ..+.+.+++.+++++++|+||+|.....
T Consensus 81 -----------------------iv~~Hhp~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 -----------------------IVVLHHPLVPPPGSGRERLL---DAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred -----------------------EEEecCCCCCCCccccccCC---CHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 88899999876543222111 3567899999999999999999997644
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.7e-10 Score=115.60 Aligned_cols=174 Identities=11% Similarity=0.097 Sum_probs=101.9
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
-++++++|.+.. ...++.+++.+++ .++|+|+++||+++.......+..+++.+.. ..+|+++
T Consensus 5 ~kIl~iSDiHgn-------------~~~le~l~~~~~~--~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~--l~~pv~~ 67 (224)
T cd07388 5 RYVLATSNPKGD-------------LEALEKLVGLAPE--TGADAIVLIGNLLPKAAKSEDYAAFFRILGE--AHLPTFY 67 (224)
T ss_pred eEEEEEEecCCC-------------HHHHHHHHHHHhh--cCCCEEEECCCCCCCCCCHHHHHHHHHHHHh--cCCceEE
Confidence 468999999875 2345556654432 5899999999999865333334444444432 2589999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEe-CcEEEEEEeCCccc
Q 006938 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDM-GVVHFVYISTETNF 370 (625)
Q Consensus 292 v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~-G~v~fI~LDT~~~~ 370 (625)
++||||.... ..+.. .|.....+|..-. ....+ ..+ |++.|+.|+-....
T Consensus 68 V~GNhD~~v~-~~l~~-----------------~~~~~~~~p~~~~---------lh~~~--~~~~g~~~~~GlGGs~~~ 118 (224)
T cd07388 68 VPGPQDAPLW-EYLRE-----------------AYNAELVHPEIRN---------VHETF--AFWRGPYLVAGVGGEIAD 118 (224)
T ss_pred EcCCCChHHH-HHHHH-----------------HhcccccCcccee---------cCCCe--EEecCCeEEEEecCCcCC
Confidence 9999996310 00000 0100000111000 01112 344 56999999854322
Q ss_pred --CCChHHH----HHHHH----HhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCc
Q 006938 371 --LQGSNQY----NFIKH----DLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHV 440 (625)
Q Consensus 371 --~~~~~Q~----~WL~~----~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~ 440 (625)
...++|. .||.+ .|.+. ..+..|+++|+|+|..+..... .+.+..++++++..+++|||.
T Consensus 119 ~~e~sE~e~~~~~~~~~~~~l~~~~~~---~~~~~VLv~H~PP~g~g~~h~G-------S~alr~~I~~~~P~l~i~GHi 188 (224)
T cd07388 119 EGEPEEHEALRYPAWVAEYRLKALWEL---KDYRKVFLFHTPPYHKGLNEQG-------SHEVAHLIKTHNPLVVLVGGK 188 (224)
T ss_pred CCCcCHHHHhhhhhhHHHHHHHHHHhC---CCCCeEEEECCCCCCCCCCccC-------HHHHHHHHHHhCCCEEEEcCC
Confidence 2345552 56433 33332 2335899999999987421111 356778999999999999999
Q ss_pred c
Q 006938 441 H 441 (625)
Q Consensus 441 H 441 (625)
|
T Consensus 189 h 189 (224)
T cd07388 189 G 189 (224)
T ss_pred c
Confidence 9
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.26 E-value=8.1e-11 Score=117.32 Aligned_cols=200 Identities=13% Similarity=0.146 Sum_probs=111.2
Q ss_pred eEEEEEecCCCCCCCcccc--cchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC-chhhHHHHHHhHHHhh-cCCc
Q 006938 213 IAFLFGDMGAATPYTTFER--TQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG-YSWLWDEFFALIEPVA-SRVA 288 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~--~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g-~~~~wd~f~~~l~~~~-~~iP 288 (625)
+|+.++|+|.+........ ......+.++++++.+.+ .+||+|+++||+++... ....+..+.+.++.+. ..+|
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIE--EKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIP 78 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHh--cCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCC
Confidence 5889999998754321100 012344567777766554 58999999999987653 2334555666666554 5899
Q ss_pred eEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc
Q 006938 289 YHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET 368 (625)
Q Consensus 289 ~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~ 368 (625)
+++++||||.......+.. . ..+. .+..-... + .........++..++.|+.++...
T Consensus 79 v~~~~GNHD~~~~~~~~~~------~---------~~~~-~~~~~~~~----~---~~~~~~~~~~~~~~v~i~g~~~~~ 135 (223)
T cd00840 79 VFIIAGNHDSPSRLGALSP------L---------LALS-GLHLVGVE----E---DVLTPLLLPKGGTGVAIYGLPYLR 135 (223)
T ss_pred EEEecCCCCCccccccccc------h---------HhhC-cEEEEccc----C---cceeEEEeccCCeEEEEEECCCCC
Confidence 9999999998642111000 0 0000 00000000 0 000112333455568888887532
Q ss_pred ccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceee
Q 006938 369 NFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERF 446 (625)
Q Consensus 369 ~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~ 446 (625)
.. ....+.++++..+.... +....|++.|.|+.......... .......+...++|++++||.|..+..
T Consensus 136 ~~-~~~~~~~~~~~~~~~~~--~~~~~Il~~H~~~~~~~~~~~~~------~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 136 RS-RLRDLLADAELRPRPLD--PDDFNILLLHGGVAGAGPSDSER------APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred HH-HHHHHHHHHHHHhhccC--CCCcEEEEEeeeeecCCCCcccc------cccCcHhhcCcCCCEEECCCcccCeee
Confidence 11 12334455555555433 34559999999986543222110 122334455678999999999997643
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.5e-10 Score=117.09 Aligned_cols=82 Identities=16% Similarity=0.248 Sum_probs=57.0
Q ss_pred CCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhc
Q 006938 206 NEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS 285 (625)
Q Consensus 206 p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~ 285 (625)
|...+++++++++|.|..... ....++++++.+++ .+||+|+++||+++.+ ....++.+.+.++.+.+
T Consensus 44 ~~~~~~~rI~~lSDlH~~~~~---------~~~~l~~~v~~i~~--~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~ 111 (271)
T PRK11340 44 KDNAAPFKILFLADLHYSRFV---------PLSLISDAIALGIE--QKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAE 111 (271)
T ss_pred CCCCCCcEEEEEcccCCCCcC---------CHHHHHHHHHHHHh--cCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhh
Confidence 333456999999999976321 12234556665543 5899999999998732 12234556666676666
Q ss_pred CCceEEccCCCCCC
Q 006938 286 RVAYHVCIGNHEYD 299 (625)
Q Consensus 286 ~iP~~~v~GNHD~~ 299 (625)
..|+++++||||+.
T Consensus 112 ~~pv~~V~GNHD~~ 125 (271)
T PRK11340 112 CAPTFACFGNHDRP 125 (271)
T ss_pred cCCEEEecCCCCcc
Confidence 78999999999984
|
|
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.8e-11 Score=112.31 Aligned_cols=126 Identities=19% Similarity=0.216 Sum_probs=76.1
Q ss_pred CCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccc
Q 006938 251 GDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKF 330 (625)
Q Consensus 251 ~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f 330 (625)
..++|+++++||+++.... ..+ ...........|+++++||||+.. +|
T Consensus 24 ~~~~d~li~~GDi~~~~~~-~~~---~~~~~~~~~~~~v~~v~GNHD~~~----------------------------~~ 71 (166)
T cd07404 24 APDADILVLAGDIGYLTDA-PRF---APLLLALKGFEPVIYVPGNHEFYV----------------------------RI 71 (166)
T ss_pred CCCCCEEEECCCCCCCcch-HHH---HHHHHhhcCCccEEEeCCCcceEE----------------------------EE
Confidence 4689999999999875432 222 212223346789999999999730 01
Q ss_pred ccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCC
Q 006938 331 HMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNEN 410 (625)
Q Consensus 331 ~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~ 410 (625)
. |. ..||.+... .+++.+|+.++++ +.+||++|+|+.......
T Consensus 72 --~-------G~------~~w~~~~~~---------------~~~~~~~~~~d~~-------~~~vv~~HhpP~~~~~~~ 114 (166)
T cd07404 72 --I-------GT------TLWSDISLF---------------GEAAARMRMNDFR-------GKTVVVTHHAPSPLSLAP 114 (166)
T ss_pred --E-------ee------ecccccCcc---------------chHHHHhCCCCCC-------CCEEEEeCCCCCccccCc
Confidence 0 10 113322211 1235555555554 238999999998754322
Q ss_pred CC--hhhhHHHHHHHHHHHHHcCceEEEEcCccCcee
Q 006938 411 RD--APLRNRMLEHLEPLFVENNVTLALWGHVHRYER 445 (625)
Q Consensus 411 ~d--~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR 445 (625)
.+ ........+.+..++++++|+++++||+|....
T Consensus 115 ~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 115 QYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred cccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 11 111123456677888889999999999998643
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2e-09 Score=110.57 Aligned_cols=90 Identities=14% Similarity=0.264 Sum_probs=58.3
Q ss_pred CCcceEEEEEecCCCCCCC-ccc-ccchh-----hHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHH
Q 006938 209 SNETIAFLFGDMGAATPYT-TFE-RTQDE-----SISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIE 281 (625)
Q Consensus 209 ~~~~~f~v~GD~g~~~~~~-~~~-~~q~~-----s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~ 281 (625)
..+++++-+.|+|.+.... ... ..+.+ ..+|..-+-+.++ .++||||+++||+++.......-..+++.++
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~--sE~PDlVVfTGD~i~g~~t~Da~~sl~kAva 128 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLA--SEKPDLVVFTGDNIFGHSTQDAATSLMKAVA 128 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHh--ccCCCEEEEeCCcccccccHhHHHHHHHHhh
Confidence 3468899999998876511 110 11111 1234443433333 4799999999999987543333334566777
Q ss_pred Hh-hcCCceEEccCCCCCCC
Q 006938 282 PV-ASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 282 ~~-~~~iP~~~v~GNHD~~~ 300 (625)
|. ..+|||.+++||||-..
T Consensus 129 P~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 129 PAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred hHhhcCCCeEEEeccccccc
Confidence 75 57899999999999864
|
|
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.2e-11 Score=95.57 Aligned_cols=61 Identities=38% Similarity=0.716 Sum_probs=39.8
Q ss_pred CCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEE-eCCEEEEEEEECCCCcEEEEE
Q 006938 466 AFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVA-TKEKLTLSYVGNHDGEVHDMV 537 (625)
Q Consensus 466 ~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v-~~~~L~~~~i~~~dG~v~D~f 537 (625)
++||||++|+||+.+.... .++|+|++++...+||++|++ |.++|.++|+.+.+|+++|+|
T Consensus 1 kapVhiv~G~aG~~l~~~~-----------~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLDPFP-----------YPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T----B------------SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCCEEEEECcCCCCccccc-----------CCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 4799999999999765432 257999999999999999985 899999999999999999997
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.3e-08 Score=93.81 Aligned_cols=59 Identities=25% Similarity=0.406 Sum_probs=37.8
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
|++++||.+... ..++.+++.+ .+||+|+++||++.. .++++.++.+ |++++
T Consensus 2 ki~~~sD~H~~~-------------~~~~~~~~~~----~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v 53 (156)
T PF12850_consen 2 KIAVISDLHGNL-------------DALEAVLEYI----NEPDFVIILGDIFDP-------EEVLELLRDI----PVYVV 53 (156)
T ss_dssp EEEEEE--TTTH-------------HHHHHHHHHH----TTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE
T ss_pred EEEEEeCCCCCh-------------hHHHHHHHHh----cCCCEEEECCCchhH-------HHHHHHHhcC----CEEEE
Confidence 789999998852 2344555544 469999999999762 4445555444 99999
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 54 ~GNHD~~ 60 (156)
T PF12850_consen 54 RGNHDNW 60 (156)
T ss_dssp --CCHST
T ss_pred eCCcccc
Confidence 9999963
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.4e-08 Score=91.00 Aligned_cols=46 Identities=26% Similarity=0.188 Sum_probs=33.3
Q ss_pred CCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCC
Q 006938 251 GDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHE 297 (625)
Q Consensus 251 ~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD 297 (625)
+.++++|+++||+++...... +..+...........|+++++||||
T Consensus 24 ~~~~~~vi~~GD~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 24 AEKPDFVLVLGDLVGDGPDPE-EVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred ccCCCEEEECCcccCCCCCch-HHHHHHHHHhhcCCCCEEEeCCCce
Confidence 478999999999998765433 3333223333457899999999998
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.2e-08 Score=92.51 Aligned_cols=59 Identities=15% Similarity=0.192 Sum_probs=40.5
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
++++++|.+... ..++.+++.+ + ++|.|+++||+++...... +....|++.+
T Consensus 1 ~i~~isD~H~~~-------------~~~~~~~~~~---~-~~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V 52 (155)
T cd00841 1 KIGVISDTHGSL-------------ELLEKALELF---G-DVDLIIHAGDVLYPGPLNE-----------LELKAPVIAV 52 (155)
T ss_pred CEEEEecCCCCH-------------HHHHHHHHHh---c-CCCEEEECCccccccccch-----------hhcCCcEEEE
Confidence 478999998652 2334444433 2 3999999999987543211 3346799999
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 53 ~GNhD~~ 59 (155)
T cd00841 53 RGNCDGE 59 (155)
T ss_pred eCCCCCc
Confidence 9999974
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.6e-08 Score=107.03 Aligned_cols=191 Identities=14% Similarity=0.104 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch----hh---HHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCC
Q 006938 237 ISTMKWILRDIEALGDKPAFVSHIGDISYARGYS----WL---WDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDW 309 (625)
Q Consensus 237 ~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~----~~---wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~ 309 (625)
..++..+++.|++...++|||+++||++-..... .. .....+.+......+|+++++||||....+ .|.+..
T Consensus 194 ~~lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N-~F~~~~ 272 (577)
T KOG3770|consen 194 KRLIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVN-LFAPGS 272 (577)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHh-hcCCCC
Confidence 4577888888887666699999999998665211 11 112234445556799999999999986322 222221
Q ss_pred CCCccCCCCCCccccccccccc--cCCCCCCCCCCCCCCCCCceEEEE-eCcEEEEEEeCCccc----------CCChHH
Q 006938 310 SYTVYGTDGGGECGVPYSLKFH--MPGNSLEPTGTRAPATRNLYYSFD-MGVVHFVYISTETNF----------LQGSNQ 376 (625)
Q Consensus 310 ~~~~Y~~d~gge~~~~y~~~f~--~P~~~~~~~G~~~~~~~~~yYsfd-~G~v~fI~LDT~~~~----------~~~~~Q 376 (625)
....+..+|.-+ .+...|. +|..... .-..+.||.-. +++.++|+||+..-+ .....|
T Consensus 273 ~~~~~~~~wly~---~~~~~W~~wlp~e~~~------t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~ 343 (577)
T KOG3770|consen 273 VPKRHSQLWLYK---HLAGAWSTWLPAEAKE------TFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQ 343 (577)
T ss_pred CcchhhhhHHHH---HHHhhhhccCCHHHHh------hhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHH
Confidence 111011111000 0011111 2221110 11234566554 488999999986321 234788
Q ss_pred HHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc--CceEEEEcCccCcee
Q 006938 377 YNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN--NVTLALWGHVHRYER 445 (625)
Q Consensus 377 ~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky--~VdlvlsGH~H~yeR 445 (625)
++|+..+|.++..+..+ +-+++|.|+-.... . +.....+-.++.++ -+...|.||.|.-+-
T Consensus 344 lqWf~~~L~~ae~~Gek-Vhil~HIPpG~~~c-~------~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f 406 (577)
T KOG3770|consen 344 LQWFVDQLQEAESAGEK-VHILGHIPPGDGVC-L------EGWSINFYRIVNRFRSTIAGQFYGHTHIDEF 406 (577)
T ss_pred hhHHHHHHHHHHhcCCE-EEEEEeeCCCCcch-h------hhhhHHHHHHHHHHHHhhhhhccccCcceeE
Confidence 99999999987644433 77889999865221 1 11122334444444 244579999998653
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.2e-08 Score=95.22 Aligned_cols=49 Identities=10% Similarity=0.117 Sum_probs=36.5
Q ss_pred CCCcEEEEcCccccCCCc--hhhHHHHHHhHHHh---hcCCceEEccCCCCCCC
Q 006938 252 DKPAFVSHIGDISYARGY--SWLWDEFFALIEPV---ASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g~--~~~wd~f~~~l~~~---~~~iP~~~v~GNHD~~~ 300 (625)
.+||+|+++||+++.+.. ..+|.+.++.+..+ ...+|++.++||||+.+
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~ 94 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGG 94 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCC
Confidence 589999999999987753 33455555555444 34699999999999963
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=6.8e-08 Score=98.29 Aligned_cols=77 Identities=17% Similarity=0.173 Sum_probs=47.9
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC-C---chhhHHHHHHhHHHhhc-CC
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR-G---YSWLWDEFFALIEPVAS-RV 287 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~-g---~~~~wd~f~~~l~~~~~-~i 287 (625)
++++++|+|.+... . ...+.+++.++....+||+|+++||+++.. + .........+.++.+.. .+
T Consensus 2 ~i~~iSDlHl~~~~-------~---~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~ 71 (241)
T PRK05340 2 PTLFISDLHLSPER-------P---AITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGV 71 (241)
T ss_pred cEEEEeecCCCCCC-------h---hHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCC
Confidence 57899999986431 1 112223333333346899999999998631 1 11222344455555543 48
Q ss_pred ceEEccCCCCCC
Q 006938 288 AYHVCIGNHEYD 299 (625)
Q Consensus 288 P~~~v~GNHD~~ 299 (625)
|+++++||||..
T Consensus 72 ~v~~v~GNHD~~ 83 (241)
T PRK05340 72 PCYFMHGNRDFL 83 (241)
T ss_pred eEEEEeCCCchh
Confidence 999999999974
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.73 E-value=5e-08 Score=94.10 Aligned_cols=49 Identities=22% Similarity=0.350 Sum_probs=36.3
Q ss_pred CCCCcEEEEcCccccCCCc--hhhHHHHHHhHHHhh-------cCCceEEccCCCCCC
Q 006938 251 GDKPAFVSHIGDISYARGY--SWLWDEFFALIEPVA-------SRVAYHVCIGNHEYD 299 (625)
Q Consensus 251 ~~~pdfvl~~GDivy~~g~--~~~wd~f~~~l~~~~-------~~iP~~~v~GNHD~~ 299 (625)
..+||+|+++||++..... ...|.+..+.+..+. ..+|++.++||||+.
T Consensus 43 ~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 43 RLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred hcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 3689999999999976532 245666555554443 278999999999985
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.8e-06 Score=82.48 Aligned_cols=74 Identities=23% Similarity=0.252 Sum_probs=47.6
Q ss_pred HHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 006938 423 LEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRS 502 (625)
Q Consensus 423 l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws 502 (625)
+..++.+.++|++++||+|...... .++.+++.-|+.|....+. .
T Consensus 98 ~~~~~~~~~~dvii~GHTH~p~~~~-----------------~~g~~viNPGSv~~~~~~~----------------~-- 142 (178)
T cd07394 98 LAALQRQLDVDILISGHTHKFEAFE-----------------HEGKFFINPGSATGAFSPL----------------D-- 142 (178)
T ss_pred HHHHHHhcCCCEEEECCCCcceEEE-----------------ECCEEEEECCCCCCCCCCC----------------C--
Confidence 3445566889999999999865432 1456667777766432210 0
Q ss_pred ceeeCcccEEEEEEeCCEEEEEEEECCCCcE
Q 006938 503 LYRGGEFGYTRLVATKEKLTLSYVGNHDGEV 533 (625)
Q Consensus 503 ~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v 533 (625)
......|++++++++.+.++++.-.++++
T Consensus 143 --~~~~~syail~~~~~~~~~~~~~l~~~~~ 171 (178)
T cd07394 143 --PNVIPSFVLMDIQGSKVVTYVYQLIDGEV 171 (178)
T ss_pred --CCCCCeEEEEEecCCeEEEEEEEEECCcE
Confidence 01123799999988888888886444443
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.8e-07 Score=97.21 Aligned_cols=78 Identities=13% Similarity=0.170 Sum_probs=54.8
Q ss_pred CCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCc
Q 006938 209 SNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVA 288 (625)
Q Consensus 209 ~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP 288 (625)
..+++++.++|.+..... ....+ .+..+. +..||+|+.+||+++. ..........+.++++.+..+
T Consensus 42 ~~~~~iv~lSDlH~~~~~----------~~~~~-~~~~i~--~~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~g 107 (284)
T COG1408 42 LQGLKIVQLSDLHSLPFR----------EEKLA-LLIAIA--NELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLG 107 (284)
T ss_pred cCCeEEEEeehhhhchhh----------HHHHH-HHHHHH--hcCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCC
Confidence 356789999999987531 11122 222232 3567999999999984 122345566677788889999
Q ss_pred eEEccCCCCCCC
Q 006938 289 YHVCIGNHEYDW 300 (625)
Q Consensus 289 ~~~v~GNHD~~~ 300 (625)
++++.||||+..
T Consensus 108 v~av~GNHd~~~ 119 (284)
T COG1408 108 VFAVLGNHDYGV 119 (284)
T ss_pred EEEEeccccccc
Confidence 999999999964
|
|
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.5e-06 Score=87.64 Aligned_cols=64 Identities=17% Similarity=0.318 Sum_probs=40.9
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
++++++||.|.... ... .+.+++ .+||+|+++||++... ...++.+..+ ..|+++
T Consensus 1 ~rIa~isDiHg~~~-----------~~~----~~~l~~--~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~ 55 (238)
T cd07397 1 LRIAIVGDVHGQWD-----------LED----IKALHL--LQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAV 55 (238)
T ss_pred CEEEEEecCCCCch-----------HHH----HHHHhc--cCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEE
Confidence 47899999996421 001 122332 4799999999997421 1233333322 479999
Q ss_pred ccCCCCCCC
Q 006938 292 CIGNHEYDW 300 (625)
Q Consensus 292 v~GNHD~~~ 300 (625)
++||||...
T Consensus 56 V~GNHD~~~ 64 (238)
T cd07397 56 ILGNHDAWY 64 (238)
T ss_pred EcCCCcccc
Confidence 999999864
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.56 E-value=6e-07 Score=82.87 Aligned_cols=48 Identities=19% Similarity=0.198 Sum_probs=31.5
Q ss_pred EEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 395 VVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 395 iIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
.|++.|.|++......... ...-.+.+..++++++++++|+||+|...
T Consensus 70 ~ilv~H~~p~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 70 DILVTHGPPYGHLDLVSSG--QRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred EEEEECCCCCcCccccccC--cccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 6788899987653221110 00112456677788999999999999864
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.2e-07 Score=87.13 Aligned_cols=48 Identities=21% Similarity=0.424 Sum_probs=35.4
Q ss_pred CCCcEEEEcCccccCCC--chhhHHHHHHhHHHhh---cCCceEEccCCCCCC
Q 006938 252 DKPAFVSHIGDISYARG--YSWLWDEFFALIEPVA---SRVAYHVCIGNHEYD 299 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g--~~~~wd~f~~~l~~~~---~~iP~~~v~GNHD~~ 299 (625)
.+||+|+++||++.... ....|..++..+..+. ..+|++.++||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 58999999999987543 2345666555554443 258999999999984
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.6e-06 Score=86.11 Aligned_cols=75 Identities=17% Similarity=0.143 Sum_probs=46.6
Q ss_pred EEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC----CchhhHHHHHHhHHHhhc-CCce
Q 006938 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR----GYSWLWDEFFALIEPVAS-RVAY 289 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~----g~~~~wd~f~~~l~~~~~-~iP~ 289 (625)
++++|.|.+... . ...+.+++.+.+...+||+|+++||+++.. ......+...+.++.+.. .+|+
T Consensus 2 ~~iSDlHl~~~~-------~---~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v 71 (231)
T TIGR01854 2 LFISDLHLSPER-------P---DITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPC 71 (231)
T ss_pred eEEEecCCCCCC-------h---hHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeE
Confidence 578999987431 1 112334444444334899999999998631 111222334445555543 5899
Q ss_pred EEccCCCCCC
Q 006938 290 HVCIGNHEYD 299 (625)
Q Consensus 290 ~~v~GNHD~~ 299 (625)
++++||||+.
T Consensus 72 ~~v~GNHD~~ 81 (231)
T TIGR01854 72 YFMHGNRDFL 81 (231)
T ss_pred EEEcCCCchh
Confidence 9999999974
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.3e-07 Score=93.31 Aligned_cols=147 Identities=16% Similarity=0.113 Sum_probs=83.9
Q ss_pred CCCCcEEEEcCccccCCCc------------------h---hh----HHHH--HHhHHHhhcCCceEEccCCCCCCCCCC
Q 006938 251 GDKPAFVSHIGDISYARGY------------------S---WL----WDEF--FALIEPVASRVAYHVCIGNHEYDWPLQ 303 (625)
Q Consensus 251 ~~~pdfvl~~GDivy~~g~------------------~---~~----wd~f--~~~l~~~~~~iP~~~v~GNHD~~~~~~ 303 (625)
+.+|||+|++||.+|.+.. . .. |..+ ...++.+.+.+|++.++.+||+..+..
T Consensus 27 ~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~ 106 (228)
T cd07389 27 EEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWG 106 (228)
T ss_pred ccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEeccccccccccc
Confidence 4799999999999998842 1 11 1122 122456678999999999999974321
Q ss_pred CCCCCCCCCccCCCCC----CccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcE-EEEEEeCCcccCCChHHHH
Q 006938 304 PWKPDWSYTVYGTDGG----GECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVV-HFVYISTETNFLQGSNQYN 378 (625)
Q Consensus 304 ~~~~~~~~~~Y~~d~g----ge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v-~fI~LDT~~~~~~~~~Q~~ 378 (625)
...+.. ...... ......|......+..... . ......|++|.+|.. .|++||+....
T Consensus 107 ~~~~~~----~~~~~~~~~~~~a~~ay~e~~~~~~~~~~--~---~~~~~~y~~~~~G~~~~~~~lD~R~~R-------- 169 (228)
T cd07389 107 GDGAWV----QDSPVFYARKAAARQAYLEFQPVRNPSPR--R---GGRGGIYRSFRFGDLVDLILLDTRTYR-------- 169 (228)
T ss_pred cccccc----cCcchHHHHHHHHHHHHHHHcCCCCCCcc--C---CCCceEEEEEecCCcceEEEEeccccc--------
Confidence 100000 000000 0011123333332222110 0 023568999999996 99999998653
Q ss_pred HHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCc--eEEEEcCccCceee
Q 006938 379 FIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNV--TLALWGHVHRYERF 446 (625)
Q Consensus 379 WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~V--dlvlsGH~H~yeR~ 446 (625)
+.+......++++..++.+.++ -++|||++|..+..
T Consensus 170 --------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH~~~~~ 207 (228)
T cd07389 170 --------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVHLAEAS 207 (228)
T ss_pred --------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHHHHHHh
Confidence 1222234456777777665543 37899999986544
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.8e-07 Score=88.33 Aligned_cols=61 Identities=15% Similarity=0.087 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhCCCCcEEEEcCccccCCC-chhhHHHHHHhHHHhh--------------------cCCceEEccCCCC
Q 006938 239 TMKWILRDIEALGDKPAFVSHIGDISYARG-YSWLWDEFFALIEPVA--------------------SRVAYHVCIGNHE 297 (625)
Q Consensus 239 tl~~i~~~i~~~~~~pdfvl~~GDivy~~g-~~~~wd~f~~~l~~~~--------------------~~iP~~~v~GNHD 297 (625)
-++.+.+.+.. .-+||.|+++||++...- ..++|.+..+.+..+. ..+|++.++||||
T Consensus 31 YL~~~~~~~~~-~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHD 109 (193)
T cd08164 31 FLGHIVSMMQF-WLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHD 109 (193)
T ss_pred HHHHHHHHHHH-hcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCccc
Confidence 34555555443 369999999999985421 2344544333333221 1489999999999
Q ss_pred CCC
Q 006938 298 YDW 300 (625)
Q Consensus 298 ~~~ 300 (625)
+..
T Consensus 110 IG~ 112 (193)
T cd08164 110 VGY 112 (193)
T ss_pred CCC
Confidence 963
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.1e-06 Score=86.35 Aligned_cols=177 Identities=15% Similarity=0.166 Sum_probs=88.5
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHH------------------
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWD------------------ 274 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd------------------ 274 (625)
++++++|.... .+.+..+.+.+.+. +||.|+++||+.-......+|.
T Consensus 7 kilA~s~~~g~-------------~e~l~~l~~~~~e~--~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~ 71 (255)
T PF14582_consen 7 KILAISNFRGD-------------FELLERLVEVIPEK--GPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEE 71 (255)
T ss_dssp EEEEEE--TT--------------HHHHHHHHHHHHHH--T-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHH
T ss_pred hheeecCcchH-------------HHHHHHHHhhcccc--CCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhh
Confidence 57788887543 34566666666653 8999999999987665556666
Q ss_pred --------HHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCC
Q 006938 275 --------EFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPA 346 (625)
Q Consensus 275 --------~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~ 346 (625)
.||+.+.. ..+|.+++|||||.... .|-. .+|....-.|.-- +
T Consensus 72 ~~~~e~~~~ff~~L~~--~~~p~~~vPG~~Dap~~-----------~~lr-------~a~~~e~v~p~~~----~----- 122 (255)
T PF14582_consen 72 CYDSEALDKFFRILGE--LGVPVFVVPGNMDAPER-----------FFLR-------EAYNAEIVTPHIH----N----- 122 (255)
T ss_dssp HHHHHHHHHHHHHHHC--C-SEEEEE--TTS-SHH-----------HHHH-------HHHHCCCC-TTEE----E-----
T ss_pred hhhHHHHHHHHHHHHh--cCCcEEEecCCCCchHH-----------HHHH-------HHhccceecccee----e-----
Confidence 55555543 58999999999997310 0100 0011000011000 0
Q ss_pred CCCceEEEEeCcEEEEEEeCCc---ccCC------ChHHHHHHHHHhhccccCCCCeEEEEcccCC-ccCCCCCCChhhh
Q 006938 347 TRNLYYSFDMGVVHFVYISTET---NFLQ------GSNQYNFIKHDLESVDRKKTPFVVVQGHRPM-YTTSNENRDAPLR 416 (625)
Q Consensus 347 ~~~~yYsfd~G~v~fI~LDT~~---~~~~------~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~-y~~~~~~~d~~~~ 416 (625)
-..-+.+.-|.+.|+.+--+- .... -....+|..+.|..++ +.+ +|+++|.|+ +..+.....
T Consensus 123 -vH~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~elk--~~r-~IlLfhtpPd~~kg~~h~G---- 194 (255)
T PF14582_consen 123 -VHESFFFWKGEYLVAGMGGEITDDQREEEFKLRYPAWEAEYSLKFLRELK--DYR-KILLFHTPPDLHKGLIHVG---- 194 (255)
T ss_dssp --CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGCT--SSE-EEEEESS-BTBCTCTBTTS----
T ss_pred -eeeeecccCCcEEEEecCccccCCCccccccccchHHHHHHHHHHHHhcc--ccc-EEEEEecCCccCCCccccc----
Confidence 001122333456677664321 1000 1234456666676643 223 788899999 443322221
Q ss_pred HHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 417 NRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 417 ~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
.+.+..++++|+.++||+||.|--.
T Consensus 195 ---S~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 195 ---SAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp ---BHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred ---HHHHHHHHHhcCCcEEEecccccch
Confidence 2457789999999999999999744
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.8e-06 Score=79.28 Aligned_cols=69 Identities=17% Similarity=0.250 Sum_probs=47.4
Q ss_pred CCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcE
Q 006938 390 KKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPV 469 (625)
Q Consensus 390 ~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~v 469 (625)
+...-.||+.|.|++++..... .+.+++++++|+.++.||.|.-.|-.+ .+.. -.|+-
T Consensus 156 k~~~~fivM~HYPP~s~~~t~~----------~~sevlee~rv~~~lyGHlHgv~~p~~--~~s~----------v~Gi~ 213 (230)
T COG1768 156 KGVSKFIVMTHYPPFSDDGTPG----------PFSEVLEEGRVSKCLYGHLHGVPRPNI--GFSN----------VRGIE 213 (230)
T ss_pred cCcCeEEEEEecCCCCCCCCCc----------chHHHHhhcceeeEEeeeccCCCCCCC--Cccc----------ccCce
Confidence 4445588999999998765432 355678899999999999999776432 1111 25777
Q ss_pred EEEECCCCCCC
Q 006938 470 HIVIGMAGQDW 480 (625)
Q Consensus 470 yIv~G~gG~~~ 480 (625)
|+.+.+-+-.+
T Consensus 214 y~LvaaDyv~F 224 (230)
T COG1768 214 YMLVAADYVEF 224 (230)
T ss_pred EEEEeccceee
Confidence 87776555443
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.6e-06 Score=79.86 Aligned_cols=62 Identities=13% Similarity=0.143 Sum_probs=39.6
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
++++++|+|.... .++.+.+.++. ..++|.|+++||++. . ...+.++.+ ..|++++
T Consensus 2 ~i~viSD~H~~~~-------------~~~~~~~~~~~-~~~~d~ii~~GD~~~----~----~~~~~l~~~--~~~~~~V 57 (158)
T TIGR00040 2 KILVISDTHGPLR-------------ATELPVELFNL-ESNVDLVIHAGDLTS----P----FVLKEFEDL--AAKVIAV 57 (158)
T ss_pred EEEEEecccCCcc-------------hhHhHHHHHhh-ccCCCEEEEcCCCCC----H----HHHHHHHHh--CCceEEE
Confidence 6899999986421 12233333332 237999999999972 1 122333322 4689999
Q ss_pred cCCCCC
Q 006938 293 IGNHEY 298 (625)
Q Consensus 293 ~GNHD~ 298 (625)
.||||.
T Consensus 58 ~GN~D~ 63 (158)
T TIGR00040 58 RGNNDG 63 (158)
T ss_pred ccCCCc
Confidence 999996
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.46 E-value=1e-05 Score=79.74 Aligned_cols=176 Identities=17% Similarity=0.206 Sum_probs=97.4
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCcccc--CCCchhhHHHHHHhHHHhh-cCC
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISY--ARGYSWLWDEFFALIEPVA-SRV 287 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy--~~g~~~~wd~f~~~l~~~~-~~i 287 (625)
..+++++.|.+... ..++++.+.++. .++|+++.+||++| .+..... .+-. .++.+. ..+
T Consensus 3 ~mkil~vtDlHg~~-------------~~~~k~~~~~~~--~~~D~lviaGDlt~~~~~~~~~~-~~~~-~~e~l~~~~~ 65 (226)
T COG2129 3 KMKILAVTDLHGSE-------------DSLKKLLNAAAD--IRADLLVIAGDLTYFHFGPKEVA-EELN-KLEALKELGI 65 (226)
T ss_pred cceEEEEeccccch-------------HHHHHHHHHHhh--ccCCEEEEecceehhhcCchHHH-Hhhh-HHHHHHhcCC
Confidence 35789999998863 123444443332 48999999999993 3322111 1100 033443 689
Q ss_pred ceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCC
Q 006938 288 AYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTE 367 (625)
Q Consensus 288 P~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~ 367 (625)
|+++++||-|-..-. . ..... |.. ..+ -..+++++.|+.+--.
T Consensus 66 ~v~avpGNcD~~~v~------------~----------~l~~~----------~~~---v~~--~v~~i~~~~~~G~Ggs 108 (226)
T COG2129 66 PVLAVPGNCDPPEVI------------D----------VLKNA----------GVN---VHG--RVVEIGGYGFVGFGGS 108 (226)
T ss_pred eEEEEcCCCChHHHH------------H----------HHHhc----------ccc---ccc--ceEEecCcEEEEeccc
Confidence 999999998853100 0 00000 000 001 3467777777774211
Q ss_pred --ccc----CCChH-HHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCc
Q 006938 368 --TNF----LQGSN-QYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHV 440 (625)
Q Consensus 368 --~~~----~~~~~-Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~ 440 (625)
+.+ .-.++ -+.-|++-+...+ +.. .|+++|.|+|....+.. ......-.+.+..++++.++-+.+|||.
T Consensus 109 n~tp~nt~~e~~E~~I~s~l~~~v~~~~-~~~--~Il~~HaPP~gt~~d~~-~g~~hvGS~~vr~~ieefqP~l~i~GHI 184 (226)
T COG2129 109 NPTPFNTPREFSEDEIYSKLKSLVKKAD-NPV--NILLTHAPPYGTLLDTP-SGYVHVGSKAVRKLIEEFQPLLGLHGHI 184 (226)
T ss_pred CCCCCCCccccCHHHHHHHHHHHHhccc-Ccc--eEEEecCCCCCccccCC-CCccccchHHHHHHHHHhCCceEEEeee
Confidence 111 11222 3334444444432 111 39999999998654321 1101112457778999999999999999
Q ss_pred cCce
Q 006938 441 HRYE 444 (625)
Q Consensus 441 H~ye 444 (625)
|-+.
T Consensus 185 HEs~ 188 (226)
T COG2129 185 HESR 188 (226)
T ss_pred cccc
Confidence 9844
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.8e-05 Score=76.88 Aligned_cols=70 Identities=13% Similarity=0.170 Sum_probs=44.3
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch-----hhHHHHHHhHHHhhcCC
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS-----WLWDEFFALIEPVASRV 287 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~-----~~wd~f~~~l~~~~~~i 287 (625)
++++++|.|... ..++.+++.+++ .++|.|+++||++..+... ...++..+.++. ...
T Consensus 2 ri~viSD~Hg~~-------------~~~~~~l~~~~~--~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~--~~~ 64 (182)
T PRK09453 2 KLMFASDTHGSL-------------PATEKALELFAQ--SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNA--YAD 64 (182)
T ss_pred eEEEEEeccCCH-------------HHHHHHHHHHHh--cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHh--cCC
Confidence 689999999541 234455555543 5899999999998643211 011223333332 246
Q ss_pred ceEEccCCCCCC
Q 006938 288 AYHVCIGNHEYD 299 (625)
Q Consensus 288 P~~~v~GNHD~~ 299 (625)
|++++.||||..
T Consensus 65 ~v~~V~GNhD~~ 76 (182)
T PRK09453 65 KIIAVRGNCDSE 76 (182)
T ss_pred ceEEEccCCcch
Confidence 899999999964
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.8e-05 Score=84.72 Aligned_cols=87 Identities=11% Similarity=0.034 Sum_probs=55.4
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCc-hhhHHHHHHhHHH------
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY-SWLWDEFFALIEP------ 282 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~-~~~wd~f~~~l~~------ 282 (625)
+..+|++++|+|.+-...... .......+++.+++.+. ..++|+||++||++..... ......+++.++.
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~-r~~D~~~~f~eil~~a~--~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~ 78 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPV-RGDDSWNTFEEVLQIAK--EQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDK 78 (405)
T ss_pred CceEEEEEcCCCCCCccCCch-hhhhHHHHHHHHHHHHH--HcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCC
Confidence 457899999999873321111 12234556777777654 3689999999999876543 2222223333332
Q ss_pred ------h----------------------hcCCceEEccCCCCCC
Q 006938 283 ------V----------------------ASRVAYHVCIGNHEYD 299 (625)
Q Consensus 283 ------~----------------------~~~iP~~~v~GNHD~~ 299 (625)
+ ...+|++++.||||..
T Consensus 79 p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 79 PCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred ccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1379999999999974
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.26 E-value=6.6e-06 Score=81.82 Aligned_cols=48 Identities=19% Similarity=0.081 Sum_probs=32.0
Q ss_pred CCCcEEEEcCccccCCC-----chhhHHHH-HHhHHHhhcCCceEEccCCCCCC
Q 006938 252 DKPAFVSHIGDISYARG-----YSWLWDEF-FALIEPVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g-----~~~~wd~f-~~~l~~~~~~iP~~~v~GNHD~~ 299 (625)
.+|+.++++||+++... ........ ...++......+++.++||||..
T Consensus 29 ~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD~~ 82 (217)
T cd07398 29 GEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHDFL 82 (217)
T ss_pred CCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCchHH
Confidence 58999999999986321 11112221 23334446789999999999985
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.9e-05 Score=79.66 Aligned_cols=59 Identities=22% Similarity=0.130 Sum_probs=34.4
Q ss_pred HHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHH-cCceEEEEcCccCce
Q 006938 377 YNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVE-NNVTLALWGHVHRYE 444 (625)
Q Consensus 377 ~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~k-y~VdlvlsGH~H~ye 444 (625)
.++..++|++ .++..+|+++|............ . ......|.++ .+||++|+||.|...
T Consensus 172 ~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~~---~---~~~~~~la~~~~~vD~IlgGHsH~~~ 231 (277)
T cd07410 172 AKKYVPKLRA---EGADVVVVLAHGGFERDLEESLT---G---ENAAYELAEEVPGIDAILTGHQHRRF 231 (277)
T ss_pred HHHHHHHHHH---cCCCEEEEEecCCcCCCcccccC---C---ccHHHHHHhcCCCCcEEEeCCCcccc
Confidence 4444445543 46778999999987653210000 0 1111234444 489999999999754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.6e-06 Score=76.05 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=20.7
Q ss_pred HHHHHHHHHcCceEEEEcCccCceee
Q 006938 421 EHLEPLFVENNVTLALWGHVHRYERF 446 (625)
Q Consensus 421 ~~l~~l~~ky~VdlvlsGH~H~yeR~ 446 (625)
+.+..++.+++++++|+||.|.....
T Consensus 81 ~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 81 EAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred HHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 45667778889999999999986544
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.5e-05 Score=79.74 Aligned_cols=82 Identities=18% Similarity=0.101 Sum_probs=45.1
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCc-EEEEcCccccCCCchhhHHHHHHhHHHhhcCCceE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPA-FVSHIGDISYARGYSWLWDEFFALIEPVASRVAYH 290 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pd-fvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~ 290 (625)
++++.++|++..-.. . .+......++.+++++++ .+|| +++.+||++....... +......++.+...-+-+
T Consensus 1 l~i~~~sD~hg~~~~--~--~~~~g~~~l~~~v~~~~~--~~~~~l~v~~GD~~~~~~~~~-~~~~~~~~~~l~~~g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEP--A--GGVGGAARLATLIKEERA--ENENTLLLDAGDNFDGSPPST-ATKGEANIELMNALGYDA 73 (252)
T ss_pred CEEEEecccccCccc--c--CCcCCHHHHHHHHHHHHh--cCCCeEEEeCCccCCCccchh-ccCCcHHHHHHHhcCCCE
Confidence 368899999844210 0 011224455666666654 3567 8899999986543221 111111222222223456
Q ss_pred EccCCCCCCC
Q 006938 291 VCIGNHEYDW 300 (625)
Q Consensus 291 ~v~GNHD~~~ 300 (625)
+++||||++.
T Consensus 74 ~~~GNHe~d~ 83 (252)
T cd00845 74 VTIGNHEFDY 83 (252)
T ss_pred Eeeccccccc
Confidence 7789999863
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.13 E-value=4.1e-05 Score=78.73 Aligned_cols=191 Identities=16% Similarity=0.223 Sum_probs=88.9
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCc-EEEEcCccccCCCchh--hHHHHHHhHHHhhcCCce
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPA-FVSHIGDISYARGYSW--LWDEFFALIEPVASRVAY 289 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pd-fvl~~GDivy~~g~~~--~wd~f~~~l~~~~~~iP~ 289 (625)
+++.+.|.+.-.+. ... +......++.+++.+++ .+|+ +++.+||++....... +.+..++.++.+ . .-
T Consensus 2 ~il~~nd~~~~~~~-~~~--~~gG~~rl~~~i~~~r~--~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l--~-~d 73 (257)
T cd07406 2 TILHFNDVYEIAPL-DGG--PVGGAARFATLRKQLRK--ENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNAL--G-VD 73 (257)
T ss_pred eEEEEccceeeccc-CCC--CcCCHHHHHHHHHHHHh--cCCCEEEEECCCccCCccchhhcCCccHHHHHHhc--C-Cc
Confidence 56777777632110 000 11124456666666654 3566 9999999975432111 111122222211 2 23
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccc-ccccCCCCCCCCCCCCCCCCCceEEEEeCcEE--EEEEeC
Q 006938 290 HVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSL-KFHMPGNSLEPTGTRAPATRNLYYSFDMGVVH--FVYIST 366 (625)
Q Consensus 290 ~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~-~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~--fI~LDT 366 (625)
+.++||||++.....+. . .+. +...++.. ....... +. ....-+.|.-++.++++ |+.+.+
T Consensus 74 ~~~~GNHefd~g~~~l~----~-~~~-----~~~~~~L~aNi~~~~~-----~~-~~~~~~~~~i~~~~g~kIgviG~~~ 137 (257)
T cd07406 74 LACFGNHEFDFGEDQLQ----K-RLG-----ESKFPWLSSNVFDATG-----GG-PLPNGKESAIIERAGVKIGLLGLVE 137 (257)
T ss_pred EEeecccccccCHHHHH----H-HHh-----hCCCCEEEEEEEECCC-----Cc-ccCCCCCeEEEEECCeEEEEEEEec
Confidence 66899999963210000 0 000 00001100 0000000 00 00012357778888865 455544
Q ss_pred Cccc------CC---ChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHH-cCceEEE
Q 006938 367 ETNF------LQ---GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVE-NNVTLAL 436 (625)
Q Consensus 367 ~~~~------~~---~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~k-y~Vdlvl 436 (625)
.... .. -.+-.+.+++.+++..+.++..+|++.|.+... + . .+.++ .+||++|
T Consensus 138 ~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~------d----~-------~la~~~~~iD~Il 200 (257)
T cd07406 138 EEWLETLTIDPEYVRYRDYVETARELVDELREQGADLIIALTHMRLPN------D----K-------RLAREVPEIDLIL 200 (257)
T ss_pred ccccccccCCCCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------h----H-------HHHHhCCCCceEE
Confidence 3110 00 112233344444333335678899999987521 1 1 12222 4899999
Q ss_pred EcCccCce
Q 006938 437 WGHVHRYE 444 (625)
Q Consensus 437 sGH~H~ye 444 (625)
+||.|...
T Consensus 201 gGH~H~~~ 208 (257)
T cd07406 201 GGHDHEYI 208 (257)
T ss_pred ecccceeE
Confidence 99999866
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.8e-05 Score=76.37 Aligned_cols=55 Identities=13% Similarity=0.061 Sum_probs=36.7
Q ss_pred EEEEcccCCccCCCCCCCh-------hhh------HHHHHHHHHHHHHcCceEEEEcCccC-ceeeecc
Q 006938 395 VVVQGHRPMYTTSNENRDA-------PLR------NRMLEHLEPLFVENNVTLALWGHVHR-YERFCPL 449 (625)
Q Consensus 395 iIV~~H~P~y~~~~~~~d~-------~~~------~~~~~~l~~l~~ky~VdlvlsGH~H~-yeR~~p~ 449 (625)
=|+++|.|+.......... .+. ..-...+..++++.+...+|+||.|. |++..|-
T Consensus 167 DIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~~~~~~ 235 (262)
T cd00844 167 DIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVPH 235 (262)
T ss_pred cEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccceecCC
Confidence 5888999998764433210 000 00124577899999999999999999 7766543
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00018 Score=75.21 Aligned_cols=86 Identities=15% Similarity=0.117 Sum_probs=43.5
Q ss_pred eEEEEEecCCCCCCCcc-cccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCce-E
Q 006938 213 IAFLFGDMGAATPYTTF-ERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAY-H 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~-~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~-~ 290 (625)
+++.+.|+|..-....+ ...+......++.+++++++. ....+++.+||++........+..--..++ ++..+.+ +
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~-~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~-~~n~~g~Da 79 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQ-NPNSLFVSAGDLIGASPFESALLQDEPTIE-ALNAMGVDA 79 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhc-CCCeEEEeCCcccccccchhhcccCCcHHH-HHHhhCCee
Confidence 67889999854221111 001112345566666666542 233599999999854332111110001112 2222332 5
Q ss_pred EccCCCCCCC
Q 006938 291 VCIGNHEYDW 300 (625)
Q Consensus 291 ~v~GNHD~~~ 300 (625)
.++||||++.
T Consensus 80 ~t~GNHefd~ 89 (288)
T cd07412 80 SAVGNHEFDE 89 (288)
T ss_pred eeeccccccc
Confidence 6789999974
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.99 E-value=5.1e-05 Score=81.46 Aligned_cols=128 Identities=14% Similarity=0.136 Sum_probs=76.6
Q ss_pred CCcceEEEEEecCCCCCCC-c-ccc-c-chhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC--chhhHHHHHHhHHH
Q 006938 209 SNETIAFLFGDMGAATPYT-T-FER-T-QDESISTMKWILRDIEALGDKPAFVSHIGDISYARG--YSWLWDEFFALIEP 282 (625)
Q Consensus 209 ~~~~~f~v~GD~g~~~~~~-~-~~~-~-q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g--~~~~wd~f~~~l~~ 282 (625)
++.+++++++|+|.-+.+. . +.. . .-.+.-.+....+... .--+||.++++||+.+.+. ..++|.+..+.++.
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~-~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~Rfkk 124 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQ-WRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKK 124 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHH-hccCCCEEEEeccccccCccCChHHHHHHHHHHHH
Confidence 5678999999999876321 0 000 0 0001111222222222 2369999999999998553 35677776666665
Q ss_pred hh---cCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcE
Q 006938 283 VA---SRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVV 359 (625)
Q Consensus 283 ~~---~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v 359 (625)
+. ..+|.+.++||||+......+ .....||.-- .++...+|+.|+.
T Consensus 125 If~~k~~~~~~~i~GNhDIGf~~~~~------------------~~~i~Rfe~~-------------fg~~~r~f~v~~~ 173 (410)
T KOG3662|consen 125 IFGRKGNIKVIYIAGNHDIGFGNELI------------------PEWIDRFESV-------------FGPTERRFDVGNL 173 (410)
T ss_pred hhCCCCCCeeEEeCCccccccccccc------------------hhHHHHHHHh-------------hcchhhhhccCCc
Confidence 53 479999999999997432110 0122333210 1224567999999
Q ss_pred EEEEEeCCc
Q 006938 360 HFVYISTET 368 (625)
Q Consensus 360 ~fI~LDT~~ 368 (625)
.|+++|++.
T Consensus 174 tf~~~d~~~ 182 (410)
T KOG3662|consen 174 TFVMFDSNA 182 (410)
T ss_pred eeEEeeehh
Confidence 999999864
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.5e-05 Score=77.82 Aligned_cols=74 Identities=12% Similarity=0.045 Sum_probs=45.3
Q ss_pred EEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHh----HHHhh-cCCceE
Q 006938 216 LFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFAL----IEPVA-SRVAYH 290 (625)
Q Consensus 216 v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~----l~~~~-~~iP~~ 290 (625)
.++|.+.+... +.-. +.+++=++..+.+.|-++++||++..---...|.+..++ +..+. ...|++
T Consensus 2 FISDlHL~~~~-------p~~t---~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 2 FISDLHLGPKR-------PALT---AFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred eeeccccCCCC-------cHHH---HHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEE
Confidence 57888887421 1212 223333444455779999999998743222245554433 33333 569999
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||+.
T Consensus 72 ~i~GN~Dfl 80 (237)
T COG2908 72 YIHGNHDFL 80 (237)
T ss_pred EecCchHHH
Confidence 999999974
|
|
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00047 Score=71.14 Aligned_cols=61 Identities=15% Similarity=0.245 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhCCCCcEE-EEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCCCCC
Q 006938 237 ISTMKWILRDIEALGDKPAFV-SHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 237 ~~tl~~i~~~i~~~~~~pdfv-l~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~ 300 (625)
...++.+++++++. ..++.+ +.+||+...... ..+... +.+-..+..+++.++.||||++.
T Consensus 35 ~~r~~~~v~~~~~~-~~~~~l~l~~GD~~~gs~~-~~~~~g-~~~~~~l~~~g~da~~GNHefd~ 96 (264)
T cd07411 35 FAHIATLIKRIRAE-RNPNTLLLDGGDTWQGSGE-ALYTRG-QAMVDALNALGVDAMVGHWEFTY 96 (264)
T ss_pred HHHHHHHHHHHHHh-cCCCeEEEeCCCccCCChH-HhhcCC-hhHHHHHHhhCCeEEeccccccc
Confidence 34455666665542 167866 679999865432 111111 12222334477766669999873
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00052 Score=70.52 Aligned_cols=81 Identities=15% Similarity=0.161 Sum_probs=42.7
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh-cCCceEE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA-SRVAYHV 291 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~-~~iP~~~ 291 (625)
+++.+.|+|..-... . .+......++.+++.+++. .+++++.+||++..... ..+..-...++.+. ..+-+ .
T Consensus 2 ~il~~~D~H~~~~~~--~-~~~~g~~~l~~~i~~~~~~--~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ln~~g~d~-~ 74 (257)
T cd07408 2 TILHTNDIHGRIDED--D-NNGIGYAKLATYKKEMNKL--DNDLLVDAGDAIQGLPI-SDLDKGETIIKIMNAVGYDA-V 74 (257)
T ss_pred EEEEeccCcccccCC--C-CccccHHHHHHHHHHHHhc--CCEEEEeCCCcCCCchh-hhhcCCcHHHHHHHhcCCcE-E
Confidence 678889998642110 0 0112234456666665542 57899999999754321 11111011122222 23444 4
Q ss_pred ccCCCCCCC
Q 006938 292 CIGNHEYDW 300 (625)
Q Consensus 292 v~GNHD~~~ 300 (625)
++||||++.
T Consensus 75 ~~GNHefd~ 83 (257)
T cd07408 75 TPGNHEFDY 83 (257)
T ss_pred ccccccccC
Confidence 689999973
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0013 Score=67.71 Aligned_cols=197 Identities=14% Similarity=0.116 Sum_probs=104.7
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC-CchhhHHHHHHhHHHhhcCCceEE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR-GYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~-g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
+++++||.=.. .....++..+..+++ ..++||++..||++-.+ +... ...+.+. ...+-++.
T Consensus 2 ~ilfiGDi~G~-----------~Gr~~l~~~L~~lk~-~~~~D~vIaNgEn~~gG~Gi~~---~~~~~L~--~~GvDviT 64 (266)
T TIGR00282 2 KFLFIGDVYGK-----------AGRKIVKNNLPQLKS-KYQADLVIANGENTTHGKGLTL---KIYEFLK--QSGVNYIT 64 (266)
T ss_pred eEEEEEecCCH-----------HHHHHHHHHHHHHHH-hCCCCEEEEcCcccCCCCCCCH---HHHHHHH--hcCCCEEE
Confidence 68899997422 123456666666654 35789999999998543 2221 1122221 24666666
Q ss_pred ccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc-cc
Q 006938 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET-NF 370 (625)
Q Consensus 292 v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~-~~ 370 (625)
+ |||+++.... .. +- +. .+ ...+..++|...+ +..|+-++.++..+-+++-.. .+
T Consensus 65 ~-GNH~~Dkge~------~~--~i-~~--~~--~~lrpanyp~~~p----------G~g~~i~~~nG~kiaVinl~G~~f 120 (266)
T TIGR00282 65 M-GNHTWFQKLI------LD--VV-IN--QK--DLVRPLNFDTSFA----------GKGSLVFEFNGAKIAVTNLQGTSV 120 (266)
T ss_pred c-cchhccCcHH------HH--HH-hc--cc--cccccCCCCCCCC----------CCCcEEEEECCEEEEEEECCCccc
Confidence 5 9999974210 00 00 00 00 0111112232111 223556777877766665321 11
Q ss_pred C-C--ChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeee
Q 006938 371 L-Q--GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFC 447 (625)
Q Consensus 371 ~-~--~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~ 447 (625)
. + ...-++-+++.+++.+ .+++.+||.+|.-.- . .+.....+.+.+|++|+.-|.|...--
T Consensus 121 m~~~~~~~Pf~~~d~~i~~lk-~~~d~IIVd~Haeat-----------s---EK~a~~~~ldg~vsaVvGtHtHV~TaD- 184 (266)
T TIGR00282 121 NLPFKTTNPFKVLKELINMLK-KDCDLIFVDFHAETT-----------S---EKNAFGMAFDGYVTAVVGTHTHVPTAD- 184 (266)
T ss_pred CCccccCCHHHHHHHHHHhhh-cCCCEEEEEeCCCCH-----------H---HHHHHHHHhCCCccEEEeCCCCCCCCc-
Confidence 1 1 1212233444444433 246789999997321 1 133345666789999999999984211
Q ss_pred ccCCccccCCCCCCCCCCCCcEEEEE-CCCCCC
Q 006938 448 PLNNFTCGSMGMDGEPSEAFPVHIVI-GMAGQD 479 (625)
Q Consensus 448 p~~~~~~~~~~~~~~~~~~g~vyIv~-G~gG~~ 479 (625)
.++. ++|+-||.- |+.|..
T Consensus 185 ----~~il---------~~gtayitD~Gm~G~~ 204 (266)
T TIGR00282 185 ----LRIL---------PKGTAYITDVGMTGPF 204 (266)
T ss_pred ----ceeC---------CCCCEEEecCCcccCc
Confidence 1111 578888864 777764
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0013 Score=67.46 Aligned_cols=172 Identities=18% Similarity=0.184 Sum_probs=87.6
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC-CchhhHHHHHHhHHHhhcCCceEE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR-GYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~-g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
+++++||.=.. .....++..++.+++ ..++||++..||++-.+ +... ...+.+. ...+-++
T Consensus 1 ~ilfigdi~g~-----------~G~~~~~~~l~~lk~-~~~~D~vi~NgEn~~gg~gl~~---~~~~~L~--~~G~D~i- 62 (255)
T cd07382 1 KILFIGDIVGK-----------PGRKAVKEHLPKLKK-EYKIDFVIANGENAAGGKGITP---KIAKELL--SAGVDVI- 62 (255)
T ss_pred CEEEEEeCCCH-----------HHHHHHHHHHHHHHH-HCCCCEEEECCccccCCCCCCH---HHHHHHH--hcCCCEE-
Confidence 47889997332 123455555666554 35789999999997654 2221 1122221 1344444
Q ss_pred ccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccc---ccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCC-
Q 006938 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKF---HMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTE- 367 (625)
Q Consensus 292 v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f---~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~- 367 (625)
+.|||+++... + + .+.... -.|.|-+ .+. | ...|+-++.+++++-+++-.
T Consensus 63 TlGNH~fD~ge--l--------~----------~~l~~~~~~l~~aN~~--~~~--p--g~~~~i~~~~G~kIaVigl~g 116 (255)
T cd07382 63 TMGNHTWDKKE--I--------L----------DFIDEEPRLLRPANYP--PGT--P--GRGYGVVEVNGKKIAVINLMG 116 (255)
T ss_pred EecccccCcch--H--------H----------HHHhcCcCceEeeecC--CCC--C--CCCeEEEEECCEEEEEEEEec
Confidence 56999997421 0 0 011111 1111111 000 1 23467778888666555422
Q ss_pred cccC-CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCc
Q 006938 368 TNFL-QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRY 443 (625)
Q Consensus 368 ~~~~-~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~y 443 (625)
..+. .-..-++-+++.+++.+. +.+.+||.+|.-.. .+ ..++.. ...-+||+++.||+|..
T Consensus 117 ~~~~~~~~~P~~~~~~~v~~lk~-~~D~IIV~~H~g~t-----------sE--k~ala~-~ldg~VdvIvGtHTHv~ 178 (255)
T cd07382 117 RVFMPPLDNPFRAADELLEELKE-EADIIFVDFHAEAT-----------SE--KIALGW-YLDGRVSAVVGTHTHVQ 178 (255)
T ss_pred ccCCCcCCCHHHHHHHHHHHHhc-CCCEEEEEECCCCC-----------HH--HHHHHH-hCCCCceEEEeCCCCcc
Confidence 1111 112223345555555442 57789999998321 01 112221 11236999999999985
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00045 Score=72.16 Aligned_cols=51 Identities=18% Similarity=0.261 Sum_probs=29.9
Q ss_pred CCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 390 KKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 390 ~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
.++.-+|++.|................ ..+...+...+||++|.||.|...
T Consensus 172 ~~~D~VI~lsH~G~~~~~~~~~~~~~~----~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 172 EKPDIVIAATHMGHYDNGEHGSNAPGD----VEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCCEEEEEecccccCCccccccCchH----HHHHHhcCCCCCCEEEeCCCCccc
Confidence 357779999999875432211111101 122222223589999999999854
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00013 Score=74.84 Aligned_cols=85 Identities=15% Similarity=0.111 Sum_probs=53.8
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch-hhHHHHHHhHHHhh-cC-Cc
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS-WLWDEFFALIEPVA-SR-VA 288 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~-~~wd~f~~~l~~~~-~~-iP 288 (625)
.+|+.++|+|.+.......+ ..+....++++++.+.+ .+||+|+++||++...... .....+.+.++.+. .. +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~~-~~~~~~~l~~l~~~~~~--~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSR-LAEQKAFLDDLLEFAKA--EQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCCh-HHHHHHHHHHHHHHHHH--cCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCce
Confidence 37899999998754222111 11223456666665543 5899999999998765432 22233444444443 23 89
Q ss_pred eEEccCCCCCC
Q 006938 289 YHVCIGNHEYD 299 (625)
Q Consensus 289 ~~~v~GNHD~~ 299 (625)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999985
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00013 Score=79.50 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=57.5
Q ss_pred ceEEEEEecCCC-CCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch-hhHHHHHHhHHHhh-cCCc
Q 006938 212 TIAFLFGDMGAA-TPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS-WLWDEFFALIEPVA-SRVA 288 (625)
Q Consensus 212 ~~f~v~GD~g~~-~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~-~~wd~f~~~l~~~~-~~iP 288 (625)
.+|+.++|+|.+ ..++...+. ......+.++++.+.+ .++||||++||++...... ..-..+.+.++.+. .++|
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~-~d~~~~f~~~l~~a~~--~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ip 77 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRL-EDQKKAFDELLEIAKE--EKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIP 77 (390)
T ss_pred CeeEEecccccchhhccCccch-HHHHHHHHHHHHHHHH--ccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCc
Confidence 379999999998 433322221 2334566667766554 6889999999998765432 22234455555543 5899
Q ss_pred eEEccCCCCCCC
Q 006938 289 YHVCIGNHEYDW 300 (625)
Q Consensus 289 ~~~v~GNHD~~~ 300 (625)
++++.||||...
T Consensus 78 v~~I~GNHD~~~ 89 (390)
T COG0420 78 VVVIAGNHDSPS 89 (390)
T ss_pred EEEecCCCCchh
Confidence 999999999853
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.64 E-value=9.6e-05 Score=73.62 Aligned_cols=72 Identities=18% Similarity=0.198 Sum_probs=44.6
Q ss_pred EEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh------CCCCcEEEEcCccccCCCchhhHHHHHHhHHH--hhcC
Q 006938 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL------GDKPAFVSHIGDISYARGYSWLWDEFFALIEP--VASR 286 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~------~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~--~~~~ 286 (625)
+++||.|.. ...++.+++.++-. ..+.|.++++||++..+....+-=.++..+.. ....
T Consensus 1 ~vi~DIHG~-------------~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~ 67 (208)
T cd07425 1 VAIGDLHGD-------------LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAG 67 (208)
T ss_pred CEEeCccCC-------------HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcC
Confidence 478999876 34566666544211 23689999999999865433221122222211 2245
Q ss_pred CceEEccCCCCCC
Q 006938 287 VAYHVCIGNHEYD 299 (625)
Q Consensus 287 iP~~~v~GNHD~~ 299 (625)
.+++++.||||..
T Consensus 68 ~~v~~l~GNHE~~ 80 (208)
T cd07425 68 GKVHFLLGNHELM 80 (208)
T ss_pred CeEEEeeCCCcHH
Confidence 7899999999975
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0014 Score=68.30 Aligned_cols=78 Identities=10% Similarity=0.125 Sum_probs=45.6
Q ss_pred ceEEEEeCcEE--EEEEeCCcc-c--C--CC---hHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHH
Q 006938 350 LYYSFDMGVVH--FVYISTETN-F--L--QG---SNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRM 419 (625)
Q Consensus 350 ~yYsfd~G~v~--fI~LDT~~~-~--~--~~---~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~ 419 (625)
.|.-++.++++ ||.+-+... . . .+ .+..+.+++.+++.+..++..+|++.|...-. + .
T Consensus 131 p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~------d----~-- 198 (281)
T cd07409 131 PSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV------D----K-- 198 (281)
T ss_pred CeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh------H----H--
Confidence 35667788855 455543211 0 0 11 23345566666655445678899999986421 0 1
Q ss_pred HHHHHHHHHH-cCceEEEEcCccCce
Q 006938 420 LEHLEPLFVE-NNVTLALWGHVHRYE 444 (625)
Q Consensus 420 ~~~l~~l~~k-y~VdlvlsGH~H~ye 444 (625)
.+.++ .+||++|+||.|...
T Consensus 199 -----~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 199 -----EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred -----HHHHcCCCCcEEEeCCcCccc
Confidence 22222 489999999999964
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0016 Score=67.98 Aligned_cols=81 Identities=14% Similarity=0.177 Sum_probs=44.9
Q ss_pred ceEEEEeC-cEE--EEEEeCCcc-------cCCC--hHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhH
Q 006938 350 LYYSFDMG-VVH--FVYISTETN-------FLQG--SNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRN 417 (625)
Q Consensus 350 ~yYsfd~G-~v~--fI~LDT~~~-------~~~~--~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~ 417 (625)
.|.-++.+ +++ ||.+-+... +.+. ..+.+|+.+.|++ .+...+|+++|....... . . .
T Consensus 137 ~y~i~~~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~----~--~-~ 206 (282)
T cd07407 137 RYRKFTTKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA----E--F-K 206 (282)
T ss_pred ceEEEEcCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc----c--H-H
Confidence 35666765 655 565543211 1111 2233488877874 357779999998764331 0 0 1
Q ss_pred HHHHHHHHHHHHc-Cce-EEEEcCccCc
Q 006938 418 RMLEHLEPLFVEN-NVT-LALWGHVHRY 443 (625)
Q Consensus 418 ~~~~~l~~l~~ky-~Vd-lvlsGH~H~y 443 (625)
.. ...+.++. ++| ++|.||+|..
T Consensus 207 ~~---~~~la~~~~~id~~Ii~GHsH~~ 231 (282)
T cd07407 207 VL---HDAIRKIFPDTPIQFLGGHSHVR 231 (282)
T ss_pred HH---HHHHHHhCCCCCEEEEeCCcccc
Confidence 11 11233333 567 7999999975
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00037 Score=74.64 Aligned_cols=84 Identities=17% Similarity=0.165 Sum_probs=51.8
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC-chhhHHHHHHh--HHHhh-cCCc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG-YSWLWDEFFAL--IEPVA-SRVA 288 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g-~~~~wd~f~~~--l~~~~-~~iP 288 (625)
+|+.++|+|.+..... .+........++++++.+. +.+||+||++||++.... ....-..+... ++.+. ..+|
T Consensus 2 KilhiSD~HLG~~~~~-~~~~~~~~~~l~~ii~~a~--~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~ 78 (340)
T PHA02546 2 KILLIGDQHLGVRKDD-PWFQNYQLKFIKQAIEYSK--AHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGIT 78 (340)
T ss_pred eEEEEeeecCCCcCCC-hhhHHHHHHHHHHHHHHHH--HcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 7899999998743211 1112223345666666554 468999999999986542 22111123322 33332 4799
Q ss_pred eEEccCCCCCC
Q 006938 289 YHVCIGNHEYD 299 (625)
Q Consensus 289 ~~~v~GNHD~~ 299 (625)
+++++||||..
T Consensus 79 v~~I~GNHD~~ 89 (340)
T PHA02546 79 LHVLVGNHDMY 89 (340)
T ss_pred EEEEccCCCcc
Confidence 99999999974
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00037 Score=76.41 Aligned_cols=85 Identities=14% Similarity=0.189 Sum_probs=51.1
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhH-HHHHHhHHHhh-cCCce
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLW-DEFFALIEPVA-SRVAY 289 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~w-d~f~~~l~~~~-~~iP~ 289 (625)
.+|+.++|+|.+.......+. ......++++++.+.+ .+||+||++||++......... ..+.+.+..+. ..+|+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~-~~~~~~l~~l~~~i~~--~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRA-AEHQAFLDWLLEQVQE--HQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccCcccH-HHHHHHHHHHHHHHHh--cCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcE
Confidence 378999999987432111111 1112334556655543 6899999999998654322211 22223333332 36899
Q ss_pred EEccCCCCCC
Q 006938 290 HVCIGNHEYD 299 (625)
Q Consensus 290 ~~v~GNHD~~ 299 (625)
++++||||..
T Consensus 78 ~~I~GNHD~~ 87 (407)
T PRK10966 78 VVLAGNHDSV 87 (407)
T ss_pred EEEcCCCCCh
Confidence 9999999975
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0024 Score=72.98 Aligned_cols=84 Identities=13% Similarity=0.096 Sum_probs=43.4
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh---CCCCcEEEEcCccccCCCchhhHHHHHH--hHHHhh
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL---GDKPAFVSHIGDISYARGYSWLWDEFFA--LIEPVA 284 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~---~~~pdfvl~~GDivy~~g~~~~wd~f~~--~l~~~~ 284 (625)
..++++.+.|+|..-....+. ......+..+++.+++. ....-++|.+||+..... +..+.+ .+-.++
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~---~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~----~s~~~~g~~~i~~m 105 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYG---EYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVP----ESDLQDAEPDFRGM 105 (551)
T ss_pred eEEEEEEecccCCCccccccC---CccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceE----hhhhcCCchhHHHH
Confidence 357899999999863211111 11234445556555432 123468999999865321 111111 111122
Q ss_pred cCCc-eEEccCCCCCCC
Q 006938 285 SRVA-YHVCIGNHEYDW 300 (625)
Q Consensus 285 ~~iP-~~~v~GNHD~~~ 300 (625)
..+. =..++||||++.
T Consensus 106 N~~g~Da~tlGNHEFD~ 122 (551)
T PRK09558 106 NLIGYDAMAVGNHEFDN 122 (551)
T ss_pred hcCCCCEEcccccccCc
Confidence 2222 244679999974
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0072 Score=58.28 Aligned_cols=64 Identities=19% Similarity=0.129 Sum_probs=40.3
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
.++++++|+|.... ...+ ..+ +. ...++|+|||+||.+...... .++. .-..++++
T Consensus 2 m~ilviSDtH~~~~------------~~~~-~~~-~~-~~~~~d~vih~GD~~~~~~~~--------~l~~-~~~~~i~~ 57 (172)
T COG0622 2 MKILVISDTHGPLR------------AIEK-ALK-IF-NLEKVDAVIHAGDSTSPFTLD--------ALEG-GLAAKLIA 57 (172)
T ss_pred cEEEEEeccCCChh------------hhhH-HHH-Hh-hhcCCCEEEECCCcCCccchH--------Hhhc-ccccceEE
Confidence 36899999998631 0111 111 11 136999999999998754311 1110 02678999
Q ss_pred ccCCCCCC
Q 006938 292 CIGNHEYD 299 (625)
Q Consensus 292 v~GNHD~~ 299 (625)
|.||.|..
T Consensus 58 V~GN~D~~ 65 (172)
T COG0622 58 VRGNCDGE 65 (172)
T ss_pred EEccCCCc
Confidence 99999984
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0051 Score=76.29 Aligned_cols=77 Identities=17% Similarity=0.251 Sum_probs=42.3
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEE-cCccccCCCchhhHHHHHHhHHHhhcCCce
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSH-IGDISYARGYSWLWDEFFALIEPVASRVAY 289 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~-~GDivy~~g~~~~wd~f~~~l~~~~~~iP~ 289 (625)
.++++.++|+|..-. ....+..+++++++ .+|+.+++ +||++...... .+......++.+..--.-
T Consensus 660 ~l~Il~~nD~Hg~l~----------g~~r~~~~i~~~r~--~~~~~l~ld~GD~~~gs~~~-~~~~g~~~~~~ln~lg~d 726 (1163)
T PRK09419 660 ELTILHTNDFHGHLD----------GAAKRVTKIKEVKE--ENPNTILVDAGDVYQGSLYS-NLLKGLPVLKMMKEMGYD 726 (1163)
T ss_pred EEEEEEEeecccCCC----------CHHHHHHHHHHHHh--hCCCeEEEecCCCCCCcchh-hhcCChHHHHHHhCcCCC
Confidence 478999999995421 12335556666554 36776655 99997543211 111111122222222233
Q ss_pred EEccCCCCCCC
Q 006938 290 HVCIGNHEYDW 300 (625)
Q Consensus 290 ~~v~GNHD~~~ 300 (625)
+.++||||++.
T Consensus 727 ~~~~GNHEfd~ 737 (1163)
T PRK09419 727 ASTFGNHEFDW 737 (1163)
T ss_pred EEEeccccccc
Confidence 56999999974
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0022 Score=72.65 Aligned_cols=204 Identities=15% Similarity=0.221 Sum_probs=99.7
Q ss_pred cceEEEEEecCCCCCCCccc-ccc-hhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCc
Q 006938 211 ETIAFLFGDMGAATPYTTFE-RTQ-DESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVA 288 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~-~~q-~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP 288 (625)
.++++...|+|..-....+. ... .........+++.+++ ..+..++|.+||++........ ..--+..-.++..++
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra-~~~~~llld~GD~~~G~~l~~~-~~~g~~~~~~mN~m~ 103 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRA-ENKNVLLLDAGDLIQGSPLSDY-LTKGEPTVDLLNALG 103 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHh-hcCCeEEEeCCcccCCcccccc-ccCCChHHHHHhhcC
Confidence 57899999998865411111 101 1122334445555544 2346799999999875432111 000111112233333
Q ss_pred e-EEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccC---CCCCCCCCCCCCCCCCceEEEEeCcEE--EE
Q 006938 289 Y-HVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMP---GNSLEPTGTRAPATRNLYYSFDMGVVH--FV 362 (625)
Q Consensus 289 ~-~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P---~~~~~~~G~~~~~~~~~yYsfd~G~v~--fI 362 (625)
+ ..++||||++.....+. .+......| .|--...+. .+...+.|.-++.++++ +|
T Consensus 104 yDa~tiGNHEFd~g~~~l~------------------~~~~~~~fp~l~aNv~~~~~~-~~~~~~Py~I~~~~g~KIgiI 164 (517)
T COG0737 104 YDAMTLGNHEFDYGLEALA------------------RLLDEAKFPVLSANVYDKNST-GPPFFKPYAIKEVGGVKIGII 164 (517)
T ss_pred CcEEeecccccccCHHHHH------------------HHHhccCCceEEeeeEecCCC-CccCcCCeEEEecCCeEEEEE
Confidence 3 56899999974311000 000001111 000000000 01123457778888755 56
Q ss_pred EEeCCc--ccC--------CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCc
Q 006938 363 YISTET--NFL--------QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNV 432 (625)
Q Consensus 363 ~LDT~~--~~~--------~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~V 432 (625)
.+.+.. .+. .-.+..+++++.+.+.+.....-+|++.|.+............. ... +.. .++
T Consensus 165 G~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~---~~~----~~~-~~i 236 (517)
T COG0737 165 GLTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPG---DVD----VAV-PGI 236 (517)
T ss_pred EecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccccc---ccc----ccc-cCc
Confidence 665421 000 01345666777776655444777999999988765432211100 000 000 349
Q ss_pred eEEEEcCccCc
Q 006938 433 TLALWGHVHRY 443 (625)
Q Consensus 433 dlvlsGH~H~y 443 (625)
|+++.||.|.+
T Consensus 237 D~i~~GH~H~~ 247 (517)
T COG0737 237 DLIIGGHSHTV 247 (517)
T ss_pred ceEeccCCccc
Confidence 99999999964
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0059 Score=69.72 Aligned_cols=62 Identities=23% Similarity=0.166 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCCCCC
Q 006938 237 ISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 237 ~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~ 300 (625)
...++.+++++++. ....+++.+||++...... .+..-...++-+..--.=..++||||++.
T Consensus 34 ~a~l~~~i~~~r~~-~~n~l~ldaGD~~~gs~~~-~~~~g~~~i~~~N~~g~Da~~lGNHEFd~ 95 (550)
T TIGR01530 34 FAALNAEINKLRAE-SKNALVLHAGDAIIGTLYF-TLFGGRADAALMNAAGFDFFTLGNHEFDA 95 (550)
T ss_pred HHHHHHHHHHHHhh-CCCeEEEECCCCCCCccch-hhcCCHHHHHHHhccCCCEEEeccccccC
Confidence 34455666665543 2336899999997543211 11100111222222223356799999974
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0016 Score=66.34 Aligned_cols=77 Identities=14% Similarity=0.185 Sum_probs=47.7
Q ss_pred EEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhC---CCCcEEEEcCccccCCCc-------------hhhHHHHHH
Q 006938 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEALG---DKPAFVSHIGDISYARGY-------------SWLWDEFFA 278 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~---~~pdfvl~~GDivy~~g~-------------~~~wd~f~~ 278 (625)
++++|.|.+.... ....++.+++.++... .++|.|+++||++..... ...+..+.+
T Consensus 2 ~~iSDlHl~~~~~--------~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (243)
T cd07386 2 VFISDVHVGSKTF--------LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAE 73 (243)
T ss_pred EEecccCCCchhh--------hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHH
Confidence 5689998764210 1122344455444332 367999999999875210 112334445
Q ss_pred hHHHhhcCCceEEccCCCCCC
Q 006938 279 LIEPVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 279 ~l~~~~~~iP~~~v~GNHD~~ 299 (625)
.++.+...+|+++++||||..
T Consensus 74 ~l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 74 YLSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHHhcccCCeEEEeCCCCCcc
Confidence 556666679999999999985
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0085 Score=63.50 Aligned_cols=47 Identities=6% Similarity=0.017 Sum_probs=27.7
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhC---CCCcEEEEcCccccC
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALG---DKPAFVSHIGDISYA 266 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~---~~pdfvl~~GDivy~ 266 (625)
+++.+.|+|..-.. ......++.+++.+++.+ ....+++.+||++..
T Consensus 2 ~IlhtnD~Hg~~~~-------~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qG 51 (313)
T cd08162 2 QLLHTSDGESGLLA-------EDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIP 51 (313)
T ss_pred eEEEecccccCccc-------cCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccC
Confidence 57788888765210 112334555566654421 334699999998753
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0026 Score=60.01 Aligned_cols=45 Identities=9% Similarity=-0.085 Sum_probs=28.8
Q ss_pred CCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCC
Q 006938 251 GDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHE 297 (625)
Q Consensus 251 ~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD 297 (625)
+...|++|.+||+.-.......|..++.. .....+|.|.+-|||+
T Consensus 24 ~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~ 68 (150)
T cd07380 24 KGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP 68 (150)
T ss_pred cCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC
Confidence 46789999999997654433333333322 1235678888777776
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0016 Score=62.53 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=45.8
Q ss_pred EEEEecCCCCCCCcc--cccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 215 FLFGDMGAATPYTTF--ERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~--~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
++++|+|.+...... .+.........+.+++.+.+.-.++|.|+++||++....... + .+.++. ...|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~-~---~~~l~~--~~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGT-E---LELLSR--LNGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHH-H---HHHHHh--CCCCeEEE
Confidence 467888877542100 000011122335566666654457899999999987554222 1 222222 24689999
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
+||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0028 Score=64.37 Aligned_cols=71 Identities=14% Similarity=0.177 Sum_probs=44.9
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHh-hcCCceEE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPV-ASRVAYHV 291 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~-~~~iP~~~ 291 (625)
+++++||.|.. ...++.+++.+.......|.++++||+++.+.... +..+.+..+ ....++++
T Consensus 2 ~~~~IsDIHG~-------------~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~---~v~~~l~~~~~~~~~~~~ 65 (235)
T PHA02239 2 AIYVVPDIHGE-------------YQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSK---DVVNYIFDLMSNDDNVVT 65 (235)
T ss_pred eEEEEECCCCC-------------HHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChH---HHHHHHHHHhhcCCCeEE
Confidence 57899999854 22355666665432223599999999998654322 222222222 23468999
Q ss_pred ccCCCCCC
Q 006938 292 CIGNHEYD 299 (625)
Q Consensus 292 v~GNHD~~ 299 (625)
++||||..
T Consensus 66 l~GNHE~~ 73 (235)
T PHA02239 66 LLGNHDDE 73 (235)
T ss_pred EECCcHHH
Confidence 99999974
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0019 Score=62.16 Aligned_cols=59 Identities=25% Similarity=0.290 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEcCccccCCCch--hhHHHHHHhHHHhhcCCceEEccCCCCCC
Q 006938 238 STMKWILRDIEALGDKPAFVSHIGDISYARGYS--WLWDEFFALIEPVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 238 ~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~--~~wd~f~~~l~~~~~~iP~~~v~GNHD~~ 299 (625)
+.++.+.+.+++ .+||.++++||+++..... ..+.. ..........+|++++.||||..
T Consensus 28 ~~~~~l~~~~~~--~~~d~lii~GDl~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 28 DTLERLDRLIEE--YGPERLIILGDLKHSFGGLSRQEFEE-VAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHHHHh--cCCCEEEEeCcccccccccCHHHHHH-HHHHHhccCCCeEEEEcccCccc
Confidence 345555554443 5899999999999754321 11221 11223334678999999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0045 Score=64.31 Aligned_cols=68 Identities=16% Similarity=0.340 Sum_probs=44.4
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++||.|.. ...++.++++++ ..++.|.++++||+++.+.... +.++.+..+ ..+++++
T Consensus 2 ~~~vIGDIHG~-------------~~~l~~ll~~~~-~~~~~D~li~lGDlVdrGp~s~---~vl~~l~~l--~~~~~~V 62 (275)
T PRK00166 2 ATYAIGDIQGC-------------YDELQRLLEKID-FDPAKDTLWLVGDLVNRGPDSL---EVLRFVKSL--GDSAVTV 62 (275)
T ss_pred cEEEEEccCCC-------------HHHHHHHHHhcC-CCCCCCEEEEeCCccCCCcCHH---HHHHHHHhc--CCCeEEE
Confidence 46899999875 234555665542 1247899999999998664332 223333222 3468899
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 63 lGNHD~~ 69 (275)
T PRK00166 63 LGNHDLH 69 (275)
T ss_pred ecChhHH
Confidence 9999974
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0044 Score=62.49 Aligned_cols=83 Identities=12% Similarity=0.004 Sum_probs=49.7
Q ss_pred ceEEEEEecCCCCCCCcccc-cc----hhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcC
Q 006938 212 TIAFLFGDMGAATPYTTFER-TQ----DESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASR 286 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~-~q----~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~ 286 (625)
.+.++++|.|.+-.. .+.. .. ....++++.+.+.++ ..+||.++++||+.........|..+.+.++.+ .
T Consensus 15 ~~~LvisDlHLG~~~-~~~~~Gi~~P~~~~~~~l~rl~~li~--~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~ 89 (225)
T TIGR00024 15 GDKAVIADLHLGFER-HLDEQGVMVPGFQFREIIERALSIAD--KYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--F 89 (225)
T ss_pred cCeEEEEeccCCCHH-HHHhcCCcCChhHHHHHHHHHHHHHh--hcCCCEEEEcCccccccCChHHHHHHHHHHHhc--C
Confidence 357899999987421 0100 00 011234444444333 257999999999987554434455544444433 3
Q ss_pred CceEEccCCCCCC
Q 006938 287 VAYHVCIGNHEYD 299 (625)
Q Consensus 287 iP~~~v~GNHD~~ 299 (625)
.+++.+.||||..
T Consensus 90 ~~v~~V~GNHD~~ 102 (225)
T TIGR00024 90 RDLILIRGNHDAL 102 (225)
T ss_pred CcEEEECCCCCCc
Confidence 5999999999963
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0043 Score=61.56 Aligned_cols=66 Identities=21% Similarity=0.248 Sum_probs=42.6
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++||.|.. ...++.+++.+.. ..++|.++++||+++.+.... +.++.+. ..+++++
T Consensus 2 ri~~isDiHg~-------------~~~l~~~l~~~~~-~~~~d~~~~~GD~v~~g~~~~---~~~~~l~----~~~~~~v 60 (207)
T cd07424 2 RDFVVGDIHGH-------------YSLLQKALDAVGF-DPARDRLISVGDLIDRGPESL---ACLELLL----EPWFHAV 60 (207)
T ss_pred CEEEEECCCCC-------------HHHHHHHHHHcCC-CCCCCEEEEeCCcccCCCCHH---HHHHHHh----cCCEEEe
Confidence 57899999864 2244555544321 246899999999997654321 2222222 2468999
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 61 ~GNhe~~ 67 (207)
T cd07424 61 RGNHEQM 67 (207)
T ss_pred ECCChHH
Confidence 9999974
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.005 Score=62.41 Aligned_cols=71 Identities=17% Similarity=0.175 Sum_probs=45.1
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh-C-------CCCcEEEEcCccccCCCchhhHHHHHHhHHHhh
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL-G-------DKPAFVSHIGDISYARGYSWLWDEFFALIEPVA 284 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~-~-------~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~ 284 (625)
+++++||.|.. ...++.+++++.-. + .+.|.++++||+++.+... .+-.+.+..+.
T Consensus 2 ~i~vigDIHG~-------------~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s---~evl~~l~~l~ 65 (234)
T cd07423 2 PFDIIGDVHGC-------------YDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDS---PEVLRLVMSMV 65 (234)
T ss_pred CeEEEEECCCC-------------HHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCH---HHHHHHHHHHh
Confidence 57899999886 33566666655211 1 1368999999999865432 12233333333
Q ss_pred cCCceEEccCCCCCC
Q 006938 285 SRVAYHVCIGNHEYD 299 (625)
Q Consensus 285 ~~iP~~~v~GNHD~~ 299 (625)
..-.++++.||||..
T Consensus 66 ~~~~~~~v~GNHE~~ 80 (234)
T cd07423 66 AAGAALCVPGNHDNK 80 (234)
T ss_pred hCCcEEEEECCcHHH
Confidence 334688999999973
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0097 Score=61.88 Aligned_cols=74 Identities=18% Similarity=0.258 Sum_probs=44.9
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh-C---CCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL-G---DKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVA 288 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~-~---~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP 288 (625)
+++++||.|.. ...++.+++.+++. . ...+.+|++||+++.+....+--.++..+........
T Consensus 3 ~iyaIGDIHG~-------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~ 69 (304)
T cd07421 3 VVICVGDIHGY-------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQR 69 (304)
T ss_pred eEEEEEeccCC-------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccc
Confidence 57899999876 33566666666432 1 2357899999999876543322222222221111225
Q ss_pred eEEccCCCCCC
Q 006938 289 YHVCIGNHEYD 299 (625)
Q Consensus 289 ~~~v~GNHD~~ 299 (625)
++++.||||..
T Consensus 70 vv~LrGNHE~~ 80 (304)
T cd07421 70 HVFLCGNHDFA 80 (304)
T ss_pred eEEEecCChHH
Confidence 78899999953
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0099 Score=67.07 Aligned_cols=82 Identities=10% Similarity=0.179 Sum_probs=51.6
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHH-------hCCCCcEEEEcCccccCCCc-------------
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEA-------LGDKPAFVSHIGDISYARGY------------- 269 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~-------~~~~pdfvl~~GDivy~~g~------------- 269 (625)
++.++++++|.|.+.... ....+..+++.+.. +..+++.++++||++...+.
T Consensus 242 ~~~~i~~ISDlHlgs~~~--------~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~ 313 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEF--------LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDI 313 (504)
T ss_pred CccEEEEEcccCCCCcch--------hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhh
Confidence 457899999999764311 11223334444431 13589999999999864221
Q ss_pred hhhHHHHHHhHHHhhcCCceEEccCCCCCC
Q 006938 270 SWLWDEFFALIEPVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 270 ~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~ 299 (625)
..+++.+.+.+..+...+|+++++||||..
T Consensus 314 ~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 314 YEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 012233444555566789999999999975
|
|
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0031 Score=63.93 Aligned_cols=182 Identities=21% Similarity=0.181 Sum_probs=100.3
Q ss_pred CcEEEEcCccccCCCc-------hhhHHHHHHhH----HHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCcc
Q 006938 254 PAFVSHIGDISYARGY-------SWLWDEFFALI----EPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGEC 322 (625)
Q Consensus 254 pdfvl~~GDivy~~g~-------~~~wd~f~~~l----~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~ 322 (625)
|--++..||++.+.+. ..++.+|-... .++...+|+|+-.||||.+-+..+..-+|-+ . .
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyR----r-----E 197 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYR----R-----E 197 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHH----H-----H
Confidence 3456778899987652 12222221111 2344679999999999998655443333311 0 0
Q ss_pred ccccccccccCCCC---CCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcc-cCC-ChHHHHHHHHHhhccccCCCCeEEE
Q 006938 323 GVPYSLKFHMPGNS---LEPTGTRAPATRNLYYSFDMGVVHFVYISTETN-FLQ-GSNQYNFIKHDLESVDRKKTPFVVV 397 (625)
Q Consensus 323 ~~~y~~~f~~P~~~---~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~-~~~-~~~Q~~WL~~~L~~~~r~~~~wiIV 397 (625)
...|...++-+++. +.+.. ..+....-||++.|++|.+-+.+... -.+ ...-+-||+.+|.....+..| +++
T Consensus 198 lrdyve~~Hr~~vf~Kppvp~a--tYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~L 274 (392)
T COG5555 198 LRDYVENYHRSDVFWKPPVPPA--TYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYL 274 (392)
T ss_pred HHHHHHhhcCcCcccCCCCCcc--cccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eee
Confidence 01121111111110 00001 11234567999999999988765321 111 133568999999875545555 888
Q ss_pred EcccCCccCCCCC--------CChh------hhHHHHHHHHHHHHHcCceEEEEcCccCceeee
Q 006938 398 QGHRPMYTTSNEN--------RDAP------LRNRMLEHLEPLFVENNVTLALWGHVHRYERFC 447 (625)
Q Consensus 398 ~~H~P~y~~~~~~--------~d~~------~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~ 447 (625)
+.|.-.-.-..+. ++.. .....+..|...+..|+|.-.+.||.|.....+
T Consensus 275 fqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~may 338 (392)
T COG5555 275 FQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMAY 338 (392)
T ss_pred hhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccceee
Confidence 8887542211110 0000 111236778888889999999999999875443
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.026 Score=70.16 Aligned_cols=48 Identities=13% Similarity=0.160 Sum_probs=30.5
Q ss_pred CCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHH-cCceEEEEcCccCce
Q 006938 390 KKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVE-NNVTLALWGHVHRYE 444 (625)
Q Consensus 390 ~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~k-y~VdlvlsGH~H~ye 444 (625)
.++.-+|++.|...-........ + .....|.++ -+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~~~----e---n~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSSGA----E---DSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCCCc----c---hHHHHHHHhCCCCcEEEeCCCcccc
Confidence 56788999999987543221111 1 122234444 389999999999964
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0095 Score=59.95 Aligned_cols=70 Identities=16% Similarity=0.247 Sum_probs=44.0
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhC------CCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCC
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALG------DKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV 287 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~------~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~i 287 (625)
+.++||.|.. ...++.+++.+.... ...|.++++||+++.+.... +-++.+..+...-
T Consensus 1 ~~vIGDIHG~-------------~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~---~vl~~l~~l~~~~ 64 (222)
T cd07413 1 YDFIGDIHGH-------------AEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIR---ELLEIVKSMVDAG 64 (222)
T ss_pred CEEEEeccCC-------------HHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHH---HHHHHHHHhhcCC
Confidence 3689999875 345666666553210 13589999999998664332 2233333333334
Q ss_pred ceEEccCCCCCC
Q 006938 288 AYHVCIGNHEYD 299 (625)
Q Consensus 288 P~~~v~GNHD~~ 299 (625)
.++++.||||..
T Consensus 65 ~~~~l~GNHE~~ 76 (222)
T cd07413 65 HALAVMGNHEFN 76 (222)
T ss_pred CEEEEEccCcHH
Confidence 688899999974
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.07 Score=63.21 Aligned_cols=89 Identities=11% Similarity=0.182 Sum_probs=45.4
Q ss_pred cceEEEEEecCCCCC-CCccccc--chhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhH---HHHH----HhH
Q 006938 211 ETIAFLFGDMGAATP-YTTFERT--QDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLW---DEFF----ALI 280 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~-~~~~~~~--q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~w---d~f~----~~l 280 (625)
.++++...|+|..-. +..+... .......++.+++++++.. .--++|.+||++...-..... +... ..+
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~-~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~ 193 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKEN-PNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPM 193 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhC-CCEEEEecCCCCCCCcccchhhhccccccCcchHH
Confidence 468999999997632 2112111 1112334555666655422 235899999998643211100 0000 112
Q ss_pred HHhhcCCce-EEccCCCCCCC
Q 006938 281 EPVASRVAY-HVCIGNHEYDW 300 (625)
Q Consensus 281 ~~~~~~iP~-~~v~GNHD~~~ 300 (625)
-.++..+.+ ..++||||++.
T Consensus 194 i~amN~LGyDA~tLGNHEFDy 214 (814)
T PRK11907 194 YAALEALGFDAGTLGNHEFNY 214 (814)
T ss_pred HHHHhccCCCEEEechhhccc
Confidence 222333333 45799999974
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.012 Score=60.16 Aligned_cols=70 Identities=13% Similarity=0.141 Sum_probs=44.0
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh-------CCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL-------GDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS 285 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~-------~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~ 285 (625)
+++++||.|.. ...++.+++.+.-. .+.-|.++++||+++.+.... +-++.+..+..
T Consensus 2 ~~~vIGDIHG~-------------~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~---~vl~~~~~~~~ 65 (245)
T PRK13625 2 KYDIIGDIHGC-------------YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSL---RMIEIVWELVE 65 (245)
T ss_pred ceEEEEECccC-------------HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChH---HHHHHHHHHhh
Confidence 57899999875 33556666543210 023479999999998664332 12233333334
Q ss_pred CCceEEccCCCCC
Q 006938 286 RVAYHVCIGNHEY 298 (625)
Q Consensus 286 ~iP~~~v~GNHD~ 298 (625)
.-.++++.||||.
T Consensus 66 ~~~~~~l~GNHE~ 78 (245)
T PRK13625 66 KKAAYYVPGNHCN 78 (245)
T ss_pred CCCEEEEeCccHH
Confidence 4579999999996
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.01 Score=59.55 Aligned_cols=66 Identities=18% Similarity=0.195 Sum_probs=43.3
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++||.|.. ...++.+++++.. ..+.|-++++||+++.+.... +.++-+ ....+..+
T Consensus 18 ri~vigDIHG~-------------~~~L~~lL~~i~~-~~~~D~li~lGDlvDrGp~s~------~vl~~l-~~~~~~~v 76 (218)
T PRK11439 18 HIWLVGDIHGC-------------FEQLMRKLRHCRF-DPWRDLLISVGDLIDRGPQSL------RCLQLL-EEHWVRAV 76 (218)
T ss_pred eEEEEEcccCC-------------HHHHHHHHHhcCC-CcccCEEEEcCcccCCCcCHH------HHHHHH-HcCCceEe
Confidence 78999999886 3355666665531 236799999999998664332 122212 12346789
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 77 ~GNHE~~ 83 (218)
T PRK11439 77 RGNHEQM 83 (218)
T ss_pred eCchHHH
Confidence 9999964
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.011 Score=60.82 Aligned_cols=66 Identities=17% Similarity=0.317 Sum_probs=43.1
Q ss_pred EEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccC
Q 006938 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIG 294 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~G 294 (625)
+++||.|.. ...++.+++++.- .++.|.++++||+++.+.... +.++.+..+ ...+..++|
T Consensus 2 yvIGDIHG~-------------~~~L~~LL~~i~~-~~~~D~Li~lGDlVdRGp~s~---evl~~l~~l--~~~v~~VlG 62 (257)
T cd07422 2 YAIGDIQGC-------------YDELQRLLEKINF-DPAKDRLWLVGDLVNRGPDSL---ETLRFVKSL--GDSAKTVLG 62 (257)
T ss_pred EEEECCCCC-------------HHHHHHHHHhcCC-CCCCCEEEEecCcCCCCcCHH---HHHHHHHhc--CCCeEEEcC
Confidence 679999875 3356666665431 246799999999998664332 223333322 246889999
Q ss_pred CCCCC
Q 006938 295 NHEYD 299 (625)
Q Consensus 295 NHD~~ 299 (625)
|||..
T Consensus 63 NHD~~ 67 (257)
T cd07422 63 NHDLH 67 (257)
T ss_pred CchHH
Confidence 99974
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.1 Score=61.67 Aligned_cols=56 Identities=9% Similarity=0.081 Sum_probs=33.0
Q ss_pred cceEEEEEecCCCCC-CCccccc--chhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC
Q 006938 211 ETIAFLFGDMGAATP-YTTFERT--QDESISTMKWILRDIEALGDKPAFVSHIGDISYAR 267 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~-~~~~~~~--q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~ 267 (625)
.++++...|+|..-. ++++... .......++.+++++++. ..-.++|.+||++...
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e-~~ntlllD~GD~iqGs 97 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREE-AKNSVLFDDGDALQGT 97 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHh-CCCeEEEECCCCCCCc
Confidence 578999999998642 2222211 112344455666665542 2235899999998643
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.17 Score=52.01 Aligned_cols=49 Identities=12% Similarity=-0.004 Sum_probs=34.7
Q ss_pred CCCcEEEEcCccccCCCc-------------------hhhHHHHHHhHHHhhcCCceEEccCCCCCCC
Q 006938 252 DKPAFVSHIGDISYARGY-------------------SWLWDEFFALIEPVASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g~-------------------~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~ 300 (625)
.+...+|++||.+...+. ....+++.+.+..+...+|+...|||||-..
T Consensus 41 s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~ 108 (257)
T cd07387 41 SSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPAN 108 (257)
T ss_pred cceEEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCccc
Confidence 455689999999875431 1223444455566678999999999999753
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.014 Score=58.50 Aligned_cols=66 Identities=17% Similarity=0.215 Sum_probs=42.4
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++||.|.. ...++.+++.+. ...+.|.++++||+++.+....+ .++.+. ...++++
T Consensus 16 ri~visDiHg~-------------~~~l~~~l~~~~-~~~~~d~l~~lGD~vdrG~~~~~---~l~~l~----~~~~~~v 74 (218)
T PRK09968 16 HIWVVGDIHGE-------------YQLLQSRLHQLS-FCPETDLLISVGDNIDRGPESLN---VLRLLN----QPWFISV 74 (218)
T ss_pred eEEEEEeccCC-------------HHHHHHHHHhcC-CCCCCCEEEECCCCcCCCcCHHH---HHHHHh----hCCcEEE
Confidence 79999999875 234455554432 12468999999999986643321 122221 2357889
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 75 ~GNHE~~ 81 (218)
T PRK09968 75 KGNHEAM 81 (218)
T ss_pred ECchHHH
Confidence 9999963
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.015 Score=58.04 Aligned_cols=67 Identities=19% Similarity=0.199 Sum_probs=41.7
Q ss_pred EEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhc-CCceEEcc
Q 006938 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS-RVAYHVCI 293 (625)
Q Consensus 215 ~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~-~iP~~~v~ 293 (625)
+++||.|.. ...+..+++.+. ...+|.++++||++..+.... +-++.+..+.. ..+++.+.
T Consensus 1 ~~igDiHg~-------------~~~l~~~l~~~~--~~~~d~li~lGD~vdrg~~~~---~~l~~l~~~~~~~~~~~~l~ 62 (225)
T cd00144 1 YVIGDIHGC-------------LDDLLRLLEKIG--FPPNDKLIFLGDYVDRGPDSV---EVIDLLLALKILPDNVILLR 62 (225)
T ss_pred CEEeCCCCC-------------HHHHHHHHHHhC--CCCCCEEEEECCEeCCCCCcH---HHHHHHHHhcCCCCcEEEEc
Confidence 368999864 234555555442 246899999999997654321 22222222211 45899999
Q ss_pred CCCCCC
Q 006938 294 GNHEYD 299 (625)
Q Consensus 294 GNHD~~ 299 (625)
||||..
T Consensus 63 GNHe~~ 68 (225)
T cd00144 63 GNHEDM 68 (225)
T ss_pred cCchhh
Confidence 999975
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.65 Score=43.66 Aligned_cols=78 Identities=18% Similarity=0.225 Sum_probs=42.5
Q ss_pred eEEEEEecCCCCCC----CcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCc
Q 006938 213 IAFLFGDMGAATPY----TTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVA 288 (625)
Q Consensus 213 ~f~v~GD~g~~~~~----~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP 288 (625)
.+.+++|++.+... .++.+ ..+.-+.|+..+++.-..-|.+.|+||++-....+.. ....++.+...+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn----~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~---a~~IlerLnGrk- 76 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSN----PDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERA---AGLILERLNGRK- 76 (186)
T ss_pred EEEEecccccCCcceeecCCCCC----HHHHhHHHHHhHHhcCCccceEEEecccccccchhhH---HHHHHHHcCCcE-
Confidence 35677888876542 22221 1222233444444432334899999999765443222 223334443333
Q ss_pred eEEccCCCCCC
Q 006938 289 YHVCIGNHEYD 299 (625)
Q Consensus 289 ~~~v~GNHD~~ 299 (625)
..++||||-.
T Consensus 77 -hlv~GNhDk~ 86 (186)
T COG4186 77 -HLVPGNHDKC 86 (186)
T ss_pred -EEeeCCCCCC
Confidence 7899999964
|
|
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.32 Score=56.66 Aligned_cols=89 Identities=11% Similarity=0.169 Sum_probs=46.4
Q ss_pred CcceEEEEEecCCCCC-CCccccc--chhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHH-------Hh
Q 006938 210 NETIAFLFGDMGAATP-YTTFERT--QDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFF-------AL 279 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~-~~~~~~~--q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~-------~~ 279 (625)
..++++...|+|..-. +..+... .......++.+++++++.. .--+++.+||++...... .|..+. ..
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~-~n~llvD~GD~~qGsp~~-~~~~~~~~~~g~~~p 101 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEA-KNSVLVDNGDLIQGSPLG-DYMAAKGLKAGDVHP 101 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhC-CCEEEEECCCcCCCchhh-hhhhhccccCCCcch
Confidence 3578999999997632 2221111 1112344556666665432 236899999998643221 111110 01
Q ss_pred HHHhhcCCce-EEccCCCCCCC
Q 006938 280 IEPVASRVAY-HVCIGNHEYDW 300 (625)
Q Consensus 280 l~~~~~~iP~-~~v~GNHD~~~ 300 (625)
+-..+..+.+ ..++||||++.
T Consensus 102 ~i~amN~lgyDa~tlGNHEFd~ 123 (649)
T PRK09420 102 VYKAMNTLDYDVGNLGNHEFNY 123 (649)
T ss_pred HHHHHHhcCCcEEeccchhhhc
Confidence 1112223333 55799999974
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.045 Score=56.76 Aligned_cols=67 Identities=18% Similarity=0.301 Sum_probs=42.7
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEcc
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCI 293 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~ 293 (625)
..++||.|.. ...++.++++++- .+..|-++++||++..+..... -++.+..+ .-.+..+.
T Consensus 3 ~YvIGDIHGc-------------~daL~~LL~~i~f-~~~~D~l~~lGDlVdRGP~sle---vL~~l~~l--~~~~~~Vl 63 (279)
T TIGR00668 3 TYLIGDLHGC-------------YDELQALLERVEF-DPGQDTLWLTGDLVARGPGSLE---VLRYVKSL--GDAVRLVL 63 (279)
T ss_pred EEEEEcccCC-------------HHHHHHHHHHhCc-CCCCCEEEEeCCccCCCCCHHH---HHHHHHhc--CCCeEEEE
Confidence 5789999876 3356667766531 2456899999999987654321 12222222 12356899
Q ss_pred CCCCCC
Q 006938 294 GNHEYD 299 (625)
Q Consensus 294 GNHD~~ 299 (625)
||||..
T Consensus 64 GNHD~~ 69 (279)
T TIGR00668 64 GNHDLH 69 (279)
T ss_pred ChhHHH
Confidence 999973
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.23 Score=46.04 Aligned_cols=84 Identities=19% Similarity=0.131 Sum_probs=57.3
Q ss_pred HHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 006938 422 HLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMR 501 (625)
Q Consensus 422 ~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~w 501 (625)
.|.-|-++..||+.++||+|..+.+. .+|-.||--|++-..+.....
T Consensus 98 sL~~LaRqldvDILl~G~Th~f~Aye-----------------~eg~ffvnPGSaTGAfn~~~t---------------- 144 (183)
T KOG3325|consen 98 SLALLARQLDVDILLTGHTHKFEAYE-----------------HEGKFFVNPGSATGAFNVSDT---------------- 144 (183)
T ss_pred HHHHHHHhcCCcEEEeCCceeEEEEE-----------------eCCcEEeCCCcccCCCccccc----------------
Confidence 45556677899999999999988764 255567776766333221100
Q ss_pred cceeeCcccEEEEEEeCCEEEEEEEECCCCcE-EEEEEEEe
Q 006938 502 SLYRGGEFGYTRLVATKEKLTLSYVGNHDGEV-HDMVEILA 541 (625)
Q Consensus 502 s~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v-~D~f~I~k 541 (625)
......|+.+++.++.+....|.--||+| +|+++..|
T Consensus 145 ---~~~~PSFvLmDiqg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 145 ---DIIVPSFVLMDIQGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred ---CCCCCceEEEEecCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 01345799999999988777666667776 67776654
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.35 Score=56.23 Aligned_cols=87 Identities=13% Similarity=0.162 Sum_probs=44.7
Q ss_pred ceEEEEEecCCCCC-CCccccc--chhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHH-------HhHH
Q 006938 212 TIAFLFGDMGAATP-YTTFERT--QDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFF-------ALIE 281 (625)
Q Consensus 212 ~~f~v~GD~g~~~~-~~~~~~~--q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~-------~~l~ 281 (625)
++++...|+|..-. +..+... .......++.+++++++.. .--+++.+||++...... .|.... ..+-
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~-~n~lllD~GD~~qGsp~~-~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEV-KNSVLVDNGDLIQGSPLG-DYMAAQGLKAGQMHPVY 80 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhC-CCeEEEECCCcCCCccch-hhhhhccccCCCcChHH
Confidence 67888999987632 2111111 1112344555666655422 336899999998644221 111100 1111
Q ss_pred HhhcCCce-EEccCCCCCCC
Q 006938 282 PVASRVAY-HVCIGNHEYDW 300 (625)
Q Consensus 282 ~~~~~iP~-~~v~GNHD~~~ 300 (625)
.++..+.+ ..++||||++.
T Consensus 81 ~~mN~lgyDa~tlGNHEFd~ 100 (626)
T TIGR01390 81 KAMNLLKYDVGNLGNHEFNY 100 (626)
T ss_pred HHHhhcCccEEecccccccc
Confidence 22233333 45799999974
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.22 Score=52.45 Aligned_cols=48 Identities=21% Similarity=0.237 Sum_probs=31.1
Q ss_pred CCCcEEEEcCccccCCCc-----------hhhHHHHHHhHH-HhhcCCceEEccCCCCCC
Q 006938 252 DKPAFVSHIGDISYARGY-----------SWLWDEFFALIE-PVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g~-----------~~~wd~f~~~l~-~~~~~iP~~~v~GNHD~~ 299 (625)
-++|++|..||+---.+. ......|++... ...+.+|.+.+=||||..
T Consensus 29 tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFIGGNHEAs 88 (456)
T KOG2863|consen 29 TKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFIGGNHEAS 88 (456)
T ss_pred CCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEecCchHHH
Confidence 478999999998332211 112233444432 345789999999999985
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.44 Score=48.28 Aligned_cols=61 Identities=18% Similarity=0.214 Sum_probs=36.5
Q ss_pred HHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceee
Q 006938 378 NFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERF 446 (625)
Q Consensus 378 ~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~ 446 (625)
+-+++.+++++ ++.+.+||..|...-.... . ... .+.+...+...++|+++.||.|..+-.
T Consensus 162 ~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~~---p---~~~-~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 162 ERIAADIAEAK-KKADIVIVSLHWGVEYSYY---P---TPE-QRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHHHHHHHh-hcCCEEEEEecCcccCCCC---C---CHH-HHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 34555555544 2378899999964422111 0 111 233444444579999999999987643
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=93.91 E-value=5.8 Score=40.53 Aligned_cols=182 Identities=16% Similarity=0.160 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCC
Q 006938 237 ISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGT 316 (625)
Q Consensus 237 ~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~ 316 (625)
...++..+..+++ ..++||||..|.++-.+ ..-..+.+.+. +...+-++ +.|||=++... ++
T Consensus 12 r~~v~~~Lp~L~~-~~~~DfVIaNgENaa~G-~Git~~~~~~L---~~~GvDvi-T~GNH~wdkke----------i~-- 73 (253)
T PF13277_consen 12 RRAVKEHLPELKE-EYGIDFVIANGENAAGG-FGITPKIAEEL---FKAGVDVI-TMGNHIWDKKE----------IF-- 73 (253)
T ss_dssp HHHHHHHHHHHGG---G-SEEEEE-TTTTTT-SS--HHHHHHH---HHHT-SEE-E--TTTTSSTT----------HH--
T ss_pred HHHHHHHHHHHHh-hcCCCEEEECCcccCCC-CCCCHHHHHHH---HhcCCCEE-ecCcccccCcH----------HH--
Confidence 3445555555543 35899999999998543 22211221111 13456665 69999986321 01
Q ss_pred CCCCccccccc---cccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc--ccCCChHHHHHHHHHhhccccCC
Q 006938 317 DGGGECGVPYS---LKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET--NFLQGSNQYNFIKHDLESVDRKK 391 (625)
Q Consensus 317 d~gge~~~~y~---~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~--~~~~~~~Q~~WL~~~L~~~~r~~ 391 (625)
.|. .+.--|.|-+. +. -+..|..++.++..+-++|-.. .......-..-+++.|++. +.+
T Consensus 74 --------~~i~~~~~ilRPaN~p~--~~----pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~ 138 (253)
T PF13277_consen 74 --------DFIDKEPRILRPANYPP--GT----PGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEE 138 (253)
T ss_dssp --------HHHHH-SSEE--TTS-T--T-----SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH-----
T ss_pred --------HHHhcCCCcEECCCCCC--CC----CcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-ccc
Confidence 011 12223443221 11 1346888999998888776421 1111122334444444443 256
Q ss_pred CCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEE
Q 006938 392 TPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHI 471 (625)
Q Consensus 392 ~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyI 471 (625)
.+.+||=+|.=.- .++ .-.-.+..-+|.+|+--|+|.-. .+.++. |+|+-||
T Consensus 139 ~~~iiVDFHAEaT-----------SEK---~A~g~~lDGrvsaV~GTHTHVqT-----aDerIL---------p~GTaYi 190 (253)
T PF13277_consen 139 TDIIIVDFHAEAT-----------SEK---QAMGWYLDGRVSAVVGTHTHVQT-----ADERIL---------PGGTAYI 190 (253)
T ss_dssp -SEEEEEEE-S-H-----------HHH---HHHHHHHBTTBSEEEEESSSS-B-----S--EE----------TTS-EEE
T ss_pred CCEEEEEeecCcH-----------HHH---HHHHHHhCCcEEEEEeCCCCccC-----chhhcc---------CCCCEEE
Confidence 7889999996211 121 12234555689999999999732 111111 5788898
Q ss_pred E-ECCCCCC
Q 006938 472 V-IGMAGQD 479 (625)
Q Consensus 472 v-~G~gG~~ 479 (625)
. +|+.|..
T Consensus 191 TDvGMtG~~ 199 (253)
T PF13277_consen 191 TDVGMTGPY 199 (253)
T ss_dssp S---EBEES
T ss_pred ecCccccCc
Confidence 5 4777764
|
|
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.63 Score=38.00 Aligned_cols=70 Identities=16% Similarity=0.190 Sum_probs=45.5
Q ss_pred CceeEEEEecCCCCceEEEEEecC--C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED--G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~--~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
+|+.+++.-. .++++.|.|.... . ..-.|+|....+... ....... +-.+.+
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~----~~~~~~~------------------~~~~~~ 58 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD----WQEVTVP------------------GNETSY 58 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSSTSSSESEEEEEEEETTSSSE----EEEEEEE------------------TTSSEE
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCCCCCeeEEEEEEEeccccee----eeeeeee------------------eeeeee
Confidence 4777777775 4689999998773 1 235678866654320 1111111 112377
Q ss_pred EEcCCCCCcEEEEEEecC
Q 006938 175 VIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~ 192 (625)
+++||+|+|.|.+||..-
T Consensus 59 ~i~~L~p~t~Y~~~v~a~ 76 (85)
T PF00041_consen 59 TITGLQPGTTYEFRVRAV 76 (85)
T ss_dssp EEESCCTTSEEEEEEEEE
T ss_pred eeccCCCCCEEEEEEEEE
Confidence 789999999999999863
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.85 Score=51.33 Aligned_cols=58 Identities=14% Similarity=0.243 Sum_probs=36.9
Q ss_pred hHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc-CceE-EEEcCccCce
Q 006938 374 SNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN-NVTL-ALWGHVHRYE 444 (625)
Q Consensus 374 ~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky-~Vdl-vlsGH~H~ye 444 (625)
-.|.+|-.+.++. .+.+-+|+++|.|.-... ... -.+..+...+ ++++ ||-||.|...
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~~-------e~~---~~~~~ir~~~p~t~IqviGGHshird 270 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDDD-------EWK---SLHAEIRKVHPNTPIQVIGGHSHIRD 270 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccch-------hhh---hHHHHHhhhCCCCceEEECchhhhhh
Confidence 4577888888876 556668899999874321 111 1233333333 6777 9999999843
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.23 E-value=7.4 Score=39.48 Aligned_cols=197 Identities=17% Similarity=0.175 Sum_probs=103.4
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
|++++||+=... ....++.-+..++. +-++||+|..|-++- +|..-.|+.+.+.++ ..+-++ +
T Consensus 2 riLfiGDvvGk~-----------Gr~~v~~~Lp~lk~-kyk~dfvI~N~ENaa-~G~Git~k~y~~l~~---~G~dvi-T 64 (266)
T COG1692 2 RILFIGDVVGKP-----------GRKAVKEHLPQLKS-KYKIDFVIVNGENAA-GGFGITEKIYKELLE---AGADVI-T 64 (266)
T ss_pred eEEEEecccCcc-----------hHHHHHHHhHHHHH-hhcCcEEEEcCcccc-CCcCCCHHHHHHHHH---hCCCEE-e
Confidence 688999984332 12334444444443 357999999999974 444445555544432 355554 6
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc--cc
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET--NF 370 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~--~~ 370 (625)
.|||=++... +|.- ..=..++--|.|-+. +. .+..|+-|+..+..+.++|-.. ..
T Consensus 65 ~GNH~wd~~e----------i~~~-------i~~~~~ilRP~N~p~--~~----~G~G~~~f~~ng~ki~V~Nl~Grv~m 121 (266)
T COG1692 65 LGNHTWDQKE----------ILDF-------IDNADRILRPANYPD--GT----PGKGSRIFKINGKKLAVINLMGRVFM 121 (266)
T ss_pred cccccccchH----------HHHH-------hhcccceeccCCCCC--CC----CcceEEEEEeCCcEEEEEEeeccccC
Confidence 9999986321 0100 000112223444221 11 1334666777776666665321 11
Q ss_pred CC-ChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeecc
Q 006938 371 LQ-GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPL 449 (625)
Q Consensus 371 ~~-~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~ 449 (625)
.. -..-..=+++.|.+.+ .+++.+||-+|.-.-+. . ++| -++-+-.|.+|+-=|+|.-.--
T Consensus 122 ~~~~d~PF~~~d~l~~~~~-~~~~~iiVDFHAEtTSE-----------K--~a~-g~yldGrvsavvGTHTHV~TaD--- 183 (266)
T COG1692 122 PPALDNPFKAADKLLDEIK-LGTDLIIVDFHAETTSE-----------K--NAF-GWYLDGRVSAVVGTHTHVPTAD--- 183 (266)
T ss_pred ccccCCHHHHHHHHHHhCc-cCCceEEEEccccchhh-----------h--hhh-heEEcCeEEEEEeccCcccccc---
Confidence 10 1222334555555543 45567999999632211 1 111 1223347899999999984322
Q ss_pred CCccccCCCCCCCCCCCCcEEEEE-CCCCC
Q 006938 450 NNFTCGSMGMDGEPSEAFPVHIVI-GMAGQ 478 (625)
Q Consensus 450 ~~~~~~~~~~~~~~~~~g~vyIv~-G~gG~ 478 (625)
.++. ++|+.||.- |+.|.
T Consensus 184 --~rIL---------~~GTayiTDvGMtG~ 202 (266)
T COG1692 184 --ERIL---------PKGTAYITDVGMTGP 202 (266)
T ss_pred --ceec---------CCCcEEEecCccccc
Confidence 1211 578888864 66665
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.94 E-value=0.5 Score=50.17 Aligned_cols=70 Identities=17% Similarity=0.105 Sum_probs=40.5
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh--cCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA--SRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~--~~iP~~ 290 (625)
+++++||.|.. ...+..+++... ....-+-.+++||+++.+...-+ . +..+-.+. ..--++
T Consensus 52 ~~~vvGDiHG~-------------~~dL~~il~~~g-~~~~~~~~lFLGDyVDRG~~s~E--v-l~ll~~lk~~~p~~v~ 114 (321)
T cd07420 52 QVTICGDLHGK-------------LDDLFLIFYKNG-LPSPENPYVFNGDFVDRGKRSIE--I-LIILFAFFLVYPNEVH 114 (321)
T ss_pred CeEEEEeCCCC-------------HHHHHHHHHHcC-CCCccceEEEeccccCCCCCcHH--H-HHHHHHHhhcCCCcEE
Confidence 57899999875 233444544321 11123679999999987643321 1 12221222 123488
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 115 llRGNHE~~ 123 (321)
T cd07420 115 LNRGNHEDH 123 (321)
T ss_pred EecCchhhh
Confidence 899999985
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.08 E-value=0.65 Score=49.07 Aligned_cols=69 Identities=14% Similarity=0.093 Sum_probs=40.7
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCC--ceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV--AYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~i--P~~ 290 (625)
.++++||.|.. ...+..+++.+. .+..+-++++||+++.+.... +-+..+..+.-.. -++
T Consensus 44 ~i~ViGDIHG~-------------~~dL~~l~~~~g--~~~~~~ylFLGDyVDRG~~s~---Evi~lL~~lki~~p~~v~ 105 (305)
T cd07416 44 PVTVCGDIHGQ-------------FYDLLKLFEVGG--SPANTRYLFLGDYVDRGYFSI---ECVLYLWALKILYPKTLF 105 (305)
T ss_pred CEEEEEeCCCC-------------HHHHHHHHHhcC--CCCCceEEEECCccCCCCChH---HHHHHHHHHHhhcCCCEE
Confidence 47899999865 223444444321 133478999999997654322 1122222222233 478
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 106 lLRGNHE~~ 114 (305)
T cd07416 106 LLRGNHECR 114 (305)
T ss_pred EEeCCCcHH
Confidence 899999974
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.97 E-value=0.7 Score=46.63 Aligned_cols=82 Identities=18% Similarity=0.180 Sum_probs=44.7
Q ss_pred eEEEEEecCCCCCCC------cccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCc--hhhHHHHHHhHHHhh
Q 006938 213 IAFLFGDMGAATPYT------TFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY--SWLWDEFFALIEPVA 284 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~------~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~--~~~wd~f~~~l~~~~ 284 (625)
+.++++|.|.+-... ...+.|. ..+.+.+.+-++ ..+|+-+|.+||+-.+-+. ..+|+..-..+ ...
T Consensus 21 ~~lVvADlHlG~e~~~~r~Gi~lP~~~~--~~~~~~l~~ii~--~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~-~~~ 95 (235)
T COG1407 21 RTLVVADLHLGYEESLARRGINLPRYQT--DRILKRLDRIIE--RYGPKRLIILGDLKHEFGKSLRQEKEEVREFL-ELL 95 (235)
T ss_pred cEEEEEecccchhHHHHhcCcccCchhH--HHHHHHHHHHHH--hcCCCEEEEcCccccccCccccccHHHHHHHH-HHh
Confidence 578999998863210 0000111 112222222233 3589999999999765443 23343322222 223
Q ss_pred cCCceEEccCCCCCC
Q 006938 285 SRVAYHVCIGNHEYD 299 (625)
Q Consensus 285 ~~iP~~~v~GNHD~~ 299 (625)
...-++.+.||||-.
T Consensus 96 ~~~evi~i~GNHD~~ 110 (235)
T COG1407 96 DEREVIIIRGNHDNG 110 (235)
T ss_pred ccCcEEEEeccCCCc
Confidence 333599999999975
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=90.87 E-value=0.8 Score=47.53 Aligned_cols=69 Identities=16% Similarity=0.124 Sum_probs=41.4
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh--cCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA--SRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~--~~iP~~ 290 (625)
+++++||.|.. ...+..+++.+. ....+-++++||+++.+.... +-+..+..+. ..--++
T Consensus 29 ~i~vvGDiHG~-------------~~~l~~ll~~~~--~~~~~~~vfLGD~VDrG~~s~---e~l~~l~~lk~~~p~~v~ 90 (271)
T smart00156 29 PVTVCGDIHGQ-------------FDDLLRLFDLNG--PPPDTNYVFLGDYVDRGPFSI---EVILLLFALKILYPNRVV 90 (271)
T ss_pred CEEEEEeCcCC-------------HHHHHHHHHHcC--CCCCceEEEeCCccCCCCChH---HHHHHHHHHHhcCCCCEE
Confidence 47899999865 233444554332 234578999999997654322 1122222222 233578
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 91 llrGNHE~~ 99 (271)
T smart00156 91 LLRGNHESR 99 (271)
T ss_pred EEeccccHH
Confidence 899999985
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.43 E-value=0.71 Score=50.01 Aligned_cols=71 Identities=21% Similarity=0.282 Sum_probs=40.8
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhc--CCce
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS--RVAY 289 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~--~iP~ 289 (625)
..+.++||.|.. ...+..+++.+. ....-+.+|++||+++.+.... +-+..+..+.- .--+
T Consensus 66 ~~i~VvGDIHG~-------------~~dL~~ll~~~g-~~~~~~~ylFLGDyVDRGp~Sl---Evl~lL~~lki~~p~~v 128 (377)
T cd07418 66 CEVVVVGDVHGQ-------------LHDVLFLLEDAG-FPDQNRFYVFNGDYVDRGAWGL---ETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CCEEEEEecCCC-------------HHHHHHHHHHhC-CCCCCceEEEeccccCCCCChH---HHHHHHHHHhhccCCeE
Confidence 358999999886 234445554321 1111246899999997654322 11222222222 2347
Q ss_pred EEccCCCCCC
Q 006938 290 HVCIGNHEYD 299 (625)
Q Consensus 290 ~~v~GNHD~~ 299 (625)
+.+.||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8899999985
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=90.32 E-value=1.2 Score=49.65 Aligned_cols=56 Identities=16% Similarity=0.060 Sum_probs=39.4
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG 268 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g 268 (625)
+.+++++..|.|++-.-+... ....+..+++.|++-.+ .++.||||..||++-.+.
T Consensus 12 ntirILVaTD~HlGY~EkD~v-rg~DSf~tFeEIl~iA~--e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDAV-RGDDSFVTFEEILEIAQ--ENDVDMILLGGDLFHENK 67 (646)
T ss_pred cceEEEEeecCccccccCCcc-cccchHHHHHHHHHHHH--hcCCcEEEecCcccccCC
Confidence 457999999999873322111 23456678888876443 479999999999987664
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=89.04 E-value=1.3 Score=48.84 Aligned_cols=83 Identities=14% Similarity=0.261 Sum_probs=50.9
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHH---hCCCCcEEEEcCccccCCC-------------chhhH
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEA---LGDKPAFVSHIGDISYARG-------------YSWLW 273 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~---~~~~pdfvl~~GDivy~~g-------------~~~~w 273 (625)
+..++++++|.+.+.. .| ....+...++.++- ++.+..+++.+||.++.-| ...++
T Consensus 224 e~v~v~~isDih~GSk--~F------~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy 295 (481)
T COG1311 224 ERVYVALISDIHRGSK--EF------LEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQY 295 (481)
T ss_pred cceEEEEEeeeecccH--HH------HHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHH
Confidence 3467899999998742 11 11122222322221 3456689999999987432 12345
Q ss_pred HHHHHhHHHhhcCCceEEccCCCCCCC
Q 006938 274 DEFFALIEPVASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 274 d~f~~~l~~~~~~iP~~~v~GNHD~~~ 300 (625)
+++-+.+..+-..+-+++.|||||...
T Consensus 296 ~~~A~~L~~vp~~I~v~i~PGnhDa~r 322 (481)
T COG1311 296 EELAEFLDQVPEHIKVFIMPGNHDAVR 322 (481)
T ss_pred HHHHHHHhhCCCCceEEEecCCCCccc
Confidence 555455555556778999999999864
|
|
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=88.96 E-value=1.2 Score=46.60 Aligned_cols=69 Identities=20% Similarity=0.151 Sum_probs=40.3
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh--cCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA--SRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~--~~iP~~ 290 (625)
.+.++||.|.. ...+..+++... .+..+-++++||+++.+.... +-+..+..+. ..-.++
T Consensus 43 ~i~vvGDIHG~-------------~~dL~~ll~~~~--~~~~~~~lfLGDyVDRG~~s~---evl~ll~~lk~~~p~~v~ 104 (285)
T cd07415 43 PVTVCGDIHGQ-------------FYDLLELFRVGG--DPPDTNYLFLGDYVDRGYYSV---ETFLLLLALKVRYPDRIT 104 (285)
T ss_pred CEEEEEeCCCC-------------HHHHHHHHHHcC--CCCCCeEEEEeEECCCCcCHH---HHHHHHHHHhhcCCCcEE
Confidence 37889999864 223444444321 134467889999997654322 1122222222 233589
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 105 llrGNHE~~ 113 (285)
T cd07415 105 LLRGNHESR 113 (285)
T ss_pred EEecccchH
Confidence 999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=88.70 E-value=1.1 Score=47.00 Aligned_cols=69 Identities=14% Similarity=0.082 Sum_probs=39.8
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCC--ceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV--AYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~i--P~~ 290 (625)
.++++||.|.. ...+..+++... .+..+-++++||++..+....+ .+..+..+.-.. -++
T Consensus 51 ~i~viGDIHG~-------------~~~L~~l~~~~~--~~~~~~~lfLGDyVDRG~~s~e---~i~ll~~lk~~~p~~i~ 112 (293)
T cd07414 51 PLKICGDIHGQ-------------YYDLLRLFEYGG--FPPESNYLFLGDYVDRGKQSLE---TICLLLAYKIKYPENFF 112 (293)
T ss_pred ceEEEEecCCC-------------HHHHHHHHHhcC--CCCcceEEEEeeEecCCCCcHH---HHHHHHHhhhhCCCcEE
Confidence 47889999864 223444444322 1344678899999976543221 111222222222 378
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 113 llrGNHE~~ 121 (293)
T cd07414 113 LLRGNHECA 121 (293)
T ss_pred EEecccchh
Confidence 899999985
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=88.47 E-value=1.3 Score=46.79 Aligned_cols=68 Identities=18% Similarity=0.139 Sum_probs=39.4
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCC--ceEE
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV--AYHV 291 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~i--P~~~ 291 (625)
++++||.|.. ...+..+++.+. ....+-++++||+++.+.... +.+..+..+.-.. -++.
T Consensus 45 i~vvGDIHG~-------------~~~L~~l~~~~~--~~~~~~~lfLGDyVDRG~~s~---evl~ll~~lk~~~p~~v~l 106 (303)
T PTZ00239 45 VNVCGDIHGQ-------------FYDLQALFKEGG--DIPNANYIFIGDFVDRGYNSV---ETMEYLLCLKVKYPGNITL 106 (303)
T ss_pred EEEEEeCCCC-------------HHHHHHHHHhcC--CCCCceEEEeeeEcCCCCCHH---HHHHHHHHhhhcCCCcEEE
Confidence 7889999864 223444444321 123467899999998664322 1122222222223 3788
Q ss_pred ccCCCCCC
Q 006938 292 CIGNHEYD 299 (625)
Q Consensus 292 v~GNHD~~ 299 (625)
+.||||..
T Consensus 107 lrGNHE~~ 114 (303)
T PTZ00239 107 LRGNHESR 114 (303)
T ss_pred EecccchH
Confidence 99999974
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=86.19 E-value=1.6 Score=46.29 Aligned_cols=23 Identities=17% Similarity=0.263 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCceEEEEcCccC
Q 006938 420 LEHLEPLFVENNVTLALWGHVHR 442 (625)
Q Consensus 420 ~~~l~~l~~ky~VdlvlsGH~H~ 442 (625)
.+.+...+++++.++++-||.=.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 45677889999999999999854
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=86.17 E-value=2.8 Score=48.89 Aligned_cols=73 Identities=25% Similarity=0.334 Sum_probs=49.7
Q ss_pred CCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcEEE
Q 006938 112 ASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYY 186 (625)
Q Consensus 112 ~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~Y~ 186 (625)
.++++++|.-.+. ..-.|+|-++...- .+|... ..-..+|+++||+|||.|-
T Consensus 456 ~~sitlsW~~p~~png~ildYEvky~ek~~~e--------~~~~~~---------------~t~~~~~ti~gL~p~t~Yv 512 (996)
T KOG0196|consen 456 SDSITLSWSEPDQPNGVILDYEVKYYEKDEDE--------RSYSTL---------------KTKTTTATITGLKPGTVYV 512 (996)
T ss_pred cCceEEecCCCCCCCCcceeEEEEEeeccccc--------cceeEE---------------ecccceEEeeccCCCcEEE
Confidence 5889999976542 24567777664211 111100 0123588999999999999
Q ss_pred EEEecCC----CCcceeEEEEcCCC
Q 006938 187 YKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 187 YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
+||.... +..|....|.|.+.
T Consensus 513 fqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 513 FQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred EEEEEecccCCCCCCCceeeeecCc
Confidence 9999743 46789999999886
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=86.13 E-value=1.5 Score=46.06 Aligned_cols=68 Identities=18% Similarity=0.085 Sum_probs=38.7
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHH--hhcCCceEE
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEP--VASRVAYHV 291 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~--~~~~iP~~~ 291 (625)
+.++||.|.. ...+..+++.+. .+..+-++++||+++.+.... +-+..+.. +.....++.
T Consensus 54 ~~ViGDIHG~-------------~~~L~~l~~~~~--~~~~~~~lfLGDyVDRG~~s~---evl~ll~~lk~~~p~~v~l 115 (294)
T PTZ00244 54 VRVCGDTHGQ-------------YYDLLRIFEKCG--FPPYSNYLFLGDYVDRGKHSV---ETITLQFCYKIVYPENFFL 115 (294)
T ss_pred ceeeccCCCC-------------HHHHHHHHHHcC--CCCcccEEEeeeEecCCCCHH---HHHHHHHHHhhccCCeEEE
Confidence 6789999865 223444444331 123346778999998654322 11111111 122345889
Q ss_pred ccCCCCCC
Q 006938 292 CIGNHEYD 299 (625)
Q Consensus 292 v~GNHD~~ 299 (625)
+.||||..
T Consensus 116 lrGNHE~~ 123 (294)
T PTZ00244 116 LRGNHECA 123 (294)
T ss_pred EecccchH
Confidence 99999974
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.89 E-value=1.8 Score=45.94 Aligned_cols=23 Identities=13% Similarity=0.147 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCceEEEEcCccC
Q 006938 420 LEHLEPLFVENNVTLALWGHVHR 442 (625)
Q Consensus 420 ~~~l~~l~~ky~VdlvlsGH~H~ 442 (625)
.+.+...+++++.++++=||.-.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCccc
Confidence 46778889999999999999855
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=85.72 E-value=2.9 Score=44.36 Aligned_cols=21 Identities=14% Similarity=0.376 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCceEEEEcCc
Q 006938 420 LEHLEPLFVENNVTLALWGHV 440 (625)
Q Consensus 420 ~~~l~~l~~ky~VdlvlsGH~ 440 (625)
.+++...++++++++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 457788999999999999998
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=84.75 E-value=7.6 Score=30.90 Aligned_cols=22 Identities=27% Similarity=0.455 Sum_probs=18.7
Q ss_pred EEEEEEcCCCCCcEEEEEEecC
Q 006938 171 IFDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
...+.+.+|.|++.|.++|..-
T Consensus 56 ~~~~~i~~l~p~~~Y~~~v~a~ 77 (93)
T cd00063 56 ETSYTLTGLKPGTEYEFRVRAV 77 (93)
T ss_pred ccEEEEccccCCCEEEEEEEEE
Confidence 3577789999999999999763
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=82.50 E-value=3.8 Score=41.80 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=42.8
Q ss_pred HHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeee
Q 006938 376 QYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFC 447 (625)
Q Consensus 376 Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~ 447 (625)
+.+.+++++++++ ++.+++||..|.-.-.. ... .+. .+.+...+.+.++|+|+.+|.|..+-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~-----~~p-~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYE-----NYP-TPE-QRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCC-----CCC-CHH-HHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4578888888876 67889999999742111 111 122 2344445555899999999999977554
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=82.18 E-value=3.1 Score=42.08 Aligned_cols=60 Identities=17% Similarity=0.202 Sum_probs=35.9
Q ss_pred HHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeee
Q 006938 380 IKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFC 447 (625)
Q Consensus 380 L~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~ 447 (625)
+++++++++ .+.+++||..|-..-.... . ... .+.+..-+.+.+||+++.||.|..+-..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~---p---~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYE---P---TDE-QRELAHALIDAGADVVIGHHPHVLQPIE 221 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCC---C---CHH-HHHHHHHHHHcCCCEEEcCCCCcCCceE
Confidence 444454443 3578899999976522111 0 111 1233334444789999999999877543
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=81.40 E-value=10 Score=29.06 Aligned_cols=22 Identities=27% Similarity=0.469 Sum_probs=19.0
Q ss_pred EEEEEEcCCCCCcEEEEEEecC
Q 006938 171 IFDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
.+...+.+|+|++.|.++|..-
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4678899999999999999763
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=81.10 E-value=4.7 Score=49.04 Aligned_cols=122 Identities=17% Similarity=0.176 Sum_probs=69.7
Q ss_pred CcCCcccCCccCCCCCC--CCCCCCCCeeeeee--eeeeCC-C-CCceeEEEEecCCCCceEEEEEecCCC-------ce
Q 006938 61 LPLGRLRNQPQEARPRS--QPSPRHGPLVGQCR--VCRVRD-G-TGPRAGALGFTEDASEMRVMFLAEDGE-------KR 127 (625)
Q Consensus 61 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~-~-~~P~qv~L~~~~~~~~~~V~W~T~~~~-------~~ 127 (625)
+.|++|+.. --|.. -.-.+.|..+.+.+ +.++.+ + ..|+.|.|.... +++++|.|.+...+ .-
T Consensus 576 ~ti~gL~k~---TeY~~~vvA~N~~G~g~sS~~i~V~Tlsd~PsaPP~Nl~lev~s-StsVrVsW~pP~~~t~ng~itgY 651 (1381)
T KOG4221|consen 576 YTINGLEKY---TEYSIRVVAYNSAGSGVSSADITVRTLSDVPSAPPQNLSLEVVS-STSVRVSWLPPPSETQNGQITGY 651 (1381)
T ss_pred EEeecCCCc---cceEEEEEEecCCCCCCCCCceEEEeccCCCCCCCcceEEEecC-CCeEEEEccCCCcccccceEEEE
Confidence 888888877 11111 11223355554444 445543 3 334448887764 69999999876532 13
Q ss_pred EEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcEEEEEEecC----CCCcceeEEEE
Q 006938 128 YVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSD----SKGWSETHSFV 203 (625)
Q Consensus 128 ~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~ 203 (625)
.++|+..+..... ..++. .+....=.+++|+|+|.|.+||..- .+..|++.++.
T Consensus 652 kIRy~~~~~~~~~-----~~t~v-----------------~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~ae 709 (1381)
T KOG4221|consen 652 KIRYRKLSREDEV-----NETVV-----------------KGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAE 709 (1381)
T ss_pred EEEecccCccccc-----ceeec-----------------ccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceecc
Confidence 4566644432110 01111 1111122367899999999999853 24678899999
Q ss_pred cCCCC
Q 006938 204 SRNED 208 (625)
Q Consensus 204 T~p~~ 208 (625)
|+-.+
T Consensus 710 T~~~d 714 (1381)
T KOG4221|consen 710 TPESD 714 (1381)
T ss_pred Ccccc
Confidence 97543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 625 | ||||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 2e-17 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 2e-17 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 3e-17 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 5e-16 |
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 625 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 3e-93 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 5e-89 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 9e-44 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 2e-37 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 1e-11 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 2e-09 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 2e-06 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 292 bits (749), Expect = 3e-93
Identities = 101/459 (22%), Positives = 166/459 (36%), Gaps = 66/459 (14%)
Query: 91 RVCRVRDGTG-PRAGALGFTED-ASEMRVMFLAEDGEKR-YVKYGEKKDQMGHVAVASVE 147
V RV G P+ + + M + ++ D V+Y +K+ +A +
Sbjct: 8 DVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMS 67
Query: 148 RYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNE 207
Y G+I I+ LK +YYY+VG + SF++ +
Sbjct: 68 TYRFF------------NYSSGFIHHTTIRKLKYNTKYYYEVGLR--NTTRRFSFITPPQ 113
Query: 208 DSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR 267
G PYT L E K V +GD+SYA
Sbjct: 114 T------------GLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYAD 161
Query: 268 GYS----WLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECG 323
Y WD + E + + GNHE ++ + E
Sbjct: 162 RYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE-------------INETEPF 208
Query: 324 VPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHD 383
P+S ++H+P + + T +YS H + +S+ + + +G+ QY ++K +
Sbjct: 209 KPFSYRYHVPYEASQSTS-------PFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKE 261
Query: 384 LESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRY 443
L V R +TP+++V H P+Y + N M E FV+ V + GHVH Y
Sbjct: 262 LRKVKRSETPWLIVLMHSPLYNSY--NHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAY 319
Query: 444 ERFCPLNNFTCGSMGMDGEPSEAF--PVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMR 501
ER ++N P + PV+I IG AG + + PQP
Sbjct: 320 ERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVI--------DSNMIQPQPEY 371
Query: 502 SLYRGGEFGYTRL-VATKEKLTLSYVGNHDGEVHDMVEI 539
S +R FG+ + + S+ N DG + +
Sbjct: 372 SAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSV 410
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 281 bits (721), Expect = 5e-89
Identities = 87/453 (19%), Positives = 154/453 (33%), Gaps = 66/453 (14%)
Query: 97 DGTGPRAGALGFTED-ASEMRVMF--LAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQ 153
P+ + + + + + + V Y + + A+ +V Y+
Sbjct: 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYN 80
Query: 154 MCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDSNETI 213
+I IK L+ +YYY++G FV+ + +
Sbjct: 81 YTS------------AFIHHCTIKDLEYDTKYYYRLGFG--DAKRQFWFVTPPKPGPDV- 125
Query: 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS--- 270
++FG +G L E K V +GD+SY+ +
Sbjct: 126 PYVFGLIG-----------DIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHD 174
Query: 271 -WLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLK 329
WD + E + + GNHE D+ G + VP++ +
Sbjct: 175 NNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDI-------------GEYQPFVPFTNR 221
Query: 330 FHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDR 389
+ P + L+Y+ H + +S+ + F++ S QY + +LE V+R
Sbjct: 222 YPTPHEASGSGD-------PLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNR 274
Query: 390 KKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPL 449
+TP+++V H P+Y + M EP FV V + GHVH YER +
Sbjct: 275 SETPWLIVLVHAPLYNSY--EAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERV 332
Query: 450 NNFTCGSMGMDGEPSEAF--PVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGG 507
+N + P PV+I IG G + P S +R
Sbjct: 333 SNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPS--------YSAFREA 384
Query: 508 EFGYTRL-VATKEKLTLSYVGNHDGEVHDMVEI 539
FG+ + + S+ N DG + +
Sbjct: 385 SFGHGIFDIKNRTHAHFSWHRNQDGASVEADSL 417
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 158 bits (400), Expect = 9e-44
Identities = 54/347 (15%), Positives = 102/347 (29%), Gaps = 65/347 (18%)
Query: 209 SNETIAFL-FGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR 267
+ F+ GD G + + + ++ F+ +GD Y
Sbjct: 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKT-----LGADFILSLGDNFYFT 57
Query: 268 GYSWLWDEFFA------LIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGE 321
G D+ F +P V +HV GNH++ +Y+
Sbjct: 58 GVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGN---VSAQIAYS--------- 105
Query: 322 CGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTE---------TNFLQ 372
S +++ P + P + F + V S + N
Sbjct: 106 ---KISKRWNFPSPYYRLRF-KIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLAL 161
Query: 373 GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNV 432
Q +IK L + K +V+V GH P+++ + L + L PL + V
Sbjct: 162 ARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEHGPTHCLV----KQLLPLLTTHKV 214
Query: 433 TLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPD 492
T L GH H + N ++ G R
Sbjct: 215 TAYLCGHDHNLQYLQDENG----------------LGFVLSGAGNFMDPSKKHLRKVPNG 258
Query: 493 DPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEI 539
F G+ + T ++++++Y+ G+ ++
Sbjct: 259 YLRF----HFGAENSLGGFAYVEITPKEMSVTYI-EASGKSLFKTKL 300
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 141 bits (356), Expect = 2e-37
Identities = 48/343 (13%), Positives = 93/343 (27%), Gaps = 63/343 (18%)
Query: 215 FLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSW--- 271
GD G T Q + K +++ ++ F+ G
Sbjct: 7 ASLGDWGKDTK------GQILNAKYFKQFIKN-----ERVTFIVSPGSNFIDGVKGLNDP 55
Query: 272 LWDEFFALI---EPVASRVAYHVCIGNHEYDW----PLQPWKPDWSYTVYGTDGGGECGV 324
W + + E + + +G ++ L + + T +
Sbjct: 56 AWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADA 115
Query: 325 PYSLKFHMPGN--SLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQG------SNQ 376
K+ MP T + + F++I T
Sbjct: 116 TNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKA 175
Query: 377 YNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLAL 436
+N +K L K F++V G +P+Y++ + L +L PL + V L +
Sbjct: 176 WNDLKSQLSVAK-KIADFIIVVGDQPIYSSGYSRGSSYLA----YYLLPLLKDAEVDLYI 230
Query: 437 WGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVF 496
GH + E + HI G
Sbjct: 231 SGHDNNMEVIEDND-----------------MAHITCGSGSMSQGKSGMKNSK------- 266
Query: 497 PQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEI 539
SL+ + G+ + + +V + GEV ++
Sbjct: 267 -----SLFFSSDIGFCVHELSNNGIVTKFVSSKKGEVIYTHKL 304
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 66.4 bits (161), Expect = 1e-11
Identities = 36/263 (13%), Positives = 71/263 (26%), Gaps = 32/263 (12%)
Query: 217 FGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEF 276
G + S L D+E+ K + GD++ G +E
Sbjct: 58 NGKAFEKYVAAGDGKQLAYSDEITDAFLADVESK--KTDVLIISGDLTN-NGEKTSHEEL 114
Query: 277 FALIEPV-ASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGN 335
+ V + V GNH+ + P T + YS +
Sbjct: 115 AKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAI 174
Query: 336 SLEPTGTRAPATRNLYYSFDMGVVHFVYIST---ETNFLQGSN---------QYNFIKHD 383
S + Y + V + + T +TN QG+ ++IK
Sbjct: 175 SSDEFSLS-------YLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKES 227
Query: 384 LESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHR- 442
+ + V H + + + + E + +L GH+H
Sbjct: 228 SALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYN--QQVIDALTEGAMDFSLSGHIHTQ 285
Query: 443 ------YERFCPLNNFTCGSMGM 459
+ + ++ +
Sbjct: 286 NIRSAKSTDGKEITDIVTNALSV 308
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 58.4 bits (140), Expect = 2e-09
Identities = 43/274 (15%), Positives = 80/274 (29%), Gaps = 39/274 (14%)
Query: 228 TFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYA--RGYSWLWDEFFALIEPVAS 285
T R S ++ + ++ V +GDI R ++ + +
Sbjct: 28 TRRRYYRGSADLLRDAVLQWRR--ERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDA 85
Query: 286 -RVAYHVCIGNHEYDWPLQPW-------KPDWSYTVYGTDGGGECGVPYS---------- 327
V H GNHE+ +P + T G+D G+ Y
Sbjct: 86 CSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFV 145
Query: 328 ------LKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGS-----NQ 376
L E ++ + V + E F++ + Q
Sbjct: 146 LLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQ 205
Query: 377 YNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLAL 436
++ L D K+ V++ H P++ + + + + L L +V +
Sbjct: 206 LQWLDAVLTLSDHKQER-VLIFSHLPVHPCAADPICLAWNHEAV--LSVLRSHQSVLCFI 262
Query: 437 WGHVHRYERFCPLNN---FTCGSMGMDGEPSEAF 467
GH H R + T + S AF
Sbjct: 263 AGHDHDGGRCTDSSGAQHITLEGVIETPPHSHAF 296
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 1e-07
Identities = 29/209 (13%), Positives = 65/209 (31%), Gaps = 51/209 (24%)
Query: 243 ILRDIEALGDKPAFVSHIGDIS---YARGYSWLWDEFFALIEPVASRVA--YHVCIGNHE 297
+L + G +P + GD++ Y + L+EP A+++ +GNH+
Sbjct: 56 LLEQLNQSGLRPDAIVFTGDLADKGEPAAY----RKLRGLVEPFAAQLGAELVWVMGNHD 111
Query: 298 YDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMG 357
+ AP+ L +
Sbjct: 112 D----------------------------------RAELRKFLLDEAPSMAPLDRVCMID 137
Query: 358 VVHFVYI-STETNFLQGS---NQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDA 413
+ + + ++ G +Q ++ +L + ++ H P+ + +
Sbjct: 138 GLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPD--GTILALHHPPIPSVLDMAVTV 195
Query: 414 PLRNRMLEHLEPLFVENNVTLALWGHVHR 442
LR++ L + +V L GH+H
Sbjct: 196 ELRDQ--AALGRVLRGTDVRAILAGHLHY 222
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 2e-07
Identities = 40/331 (12%), Positives = 77/331 (23%), Gaps = 117/331 (35%)
Query: 230 ERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEF-FALIEPVASRVA 288
+ + W L + + FV + Y +L +P
Sbjct: 57 SKDAVSGTLRLFWTLLSKQEEMVQ-KFV----EEVLRINYKFLMSPIKTEQRQPSMMTRM 111
Query: 289 YHVCI-----GNHEYD----------WPLQPW----KPDWSYTVYGTDGGGECG------ 323
Y N + L+ +P + + G G G
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG-VLG--SGKTWVAL 168
Query: 324 ---VPYSLKFHMP--------GNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQ 372
+ Y ++ M N P L Y D N+
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ-KLLYQID------------PNWTS 215
Query: 373 GSNQYNFIKHDLESVDRKKTPFVVVQGH-----------------------RPMYTTSNE 409
S+ + IK + S+ + + + + + + TT
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT--- 272
Query: 410 NRDAPLRNRM---------LEHLEPLFVENNVT--LALWGHVHRYERFCPLNNFTCGSMG 458
R + + + L+H + V L + L+
Sbjct: 273 -RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY-----------LD------CR 314
Query: 459 MDGEPSEA---FPVHI-VIGMAGQDWQPIWQ 485
P E P + +I + +D W
Sbjct: 315 PQDLPREVLTTNPRRLSIIAESIRDGLATWD 345
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 29/209 (13%), Positives = 59/209 (28%), Gaps = 50/209 (23%)
Query: 243 ILRDIEALGDKPAFVSHIGDIS---YARGYSWLWDEFFALIEPVASRVAYHVCIGNHEYD 299
++ + AL ++P V GDI Y ++ + ++ GNH+
Sbjct: 31 VVSQLNALRERPDAVVVSGDIVNCGRPEEY----QVARQILGSL--NYPLYLIPGNHDDK 84
Query: 300 WPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVV 359
+ N+ + D
Sbjct: 85 ALFLEYLQPLCP------------------------------QLGSDANNMRCAVDDFAT 114
Query: 360 HFVYI-STETNFLQG---SNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPL 415
++I S+ +G ++++ L K P + H P+ + +
Sbjct: 115 RLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDK--PATIFMHHPPLPLGNAQMDPIAC 172
Query: 416 RN--RMLEHLEPLFVENNVTLALWGHVHR 442
N R+L +E ++T GH H
Sbjct: 173 ENGHRLLALVERF---PSLTRIFCGHNHS 198
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 625 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.96 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.89 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.86 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.86 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.73 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.45 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.37 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.32 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.18 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.17 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.15 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.13 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.12 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.01 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 98.95 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 98.93 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.92 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 98.92 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.71 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.7 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.69 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.66 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.6 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.58 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.47 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.03 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 97.9 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 97.89 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 97.76 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 97.71 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 97.71 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.53 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 97.52 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 97.46 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.38 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 97.34 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 97.3 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 96.85 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 96.78 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 96.58 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 96.35 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.28 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 96.21 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.08 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.03 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 95.68 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 95.62 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 95.55 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 95.47 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 95.43 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 95.4 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 95.35 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 95.19 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 95.04 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 94.96 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 94.94 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 94.83 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 94.81 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 94.81 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 94.74 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 94.7 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 94.68 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 94.61 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 94.57 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 94.53 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 94.45 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 94.45 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 94.37 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 94.29 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 94.25 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 94.21 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 94.08 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 94.01 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 93.95 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 93.92 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 93.91 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 93.86 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 93.85 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 93.84 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 93.82 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 93.77 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 93.68 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 93.68 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 93.65 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 93.48 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 93.46 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 93.34 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 93.33 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 93.32 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 93.22 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 93.21 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 93.18 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 93.15 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 93.04 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 93.02 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 93.0 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 92.95 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 92.78 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 92.78 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 92.72 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 92.69 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 92.54 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 92.54 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 92.47 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 92.47 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 92.36 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 92.12 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 92.01 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 91.89 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 91.84 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 91.82 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 91.47 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 91.38 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 91.35 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 91.08 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 90.96 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 90.9 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 90.86 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 90.81 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 90.11 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 89.99 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 89.96 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 89.94 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 89.94 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 89.92 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 89.84 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 89.63 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 89.59 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 89.57 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 89.47 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 89.46 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 89.33 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 89.29 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 89.27 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 89.0 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 88.85 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 88.62 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 88.61 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 88.58 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 88.44 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 88.31 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 88.03 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 87.83 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 87.77 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 87.57 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 87.53 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 87.48 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 87.45 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 87.4 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 87.21 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 87.12 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 86.95 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 86.92 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 86.74 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 86.62 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 86.29 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 86.1 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 85.15 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 84.96 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 84.95 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 84.68 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 84.58 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 84.03 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 84.03 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 83.84 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 83.83 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 83.26 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 82.87 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 82.19 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 82.1 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 82.05 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 80.73 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 80.71 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-59 Score=507.06 Aligned_cols=388 Identities=24% Similarity=0.379 Sum_probs=305.2
Q ss_pred CCCCceeEEEEecCCC-CceEEEEEec-C-CCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 97 DGTGPRAGALGFTEDA-SEMRVMFLAE-D-GEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~-~~~~V~W~T~-~-~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
+.+.|+||||++++++ ++|+|+|+|. + ++.+.|+||+.++.+...+.+++.+|...+ ...+|+|+
T Consensus 21 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 88 (426)
T 1xzw_A 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYN------------YTSAFIHH 88 (426)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETT------------EECCEEEE
T ss_pred CCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecC------------CcCCEEEE
Confidence 5678999999999986 9999999998 5 478999999998877777777766665321 13579999
Q ss_pred EEEcCCCCCcEEEEEEecCCCCcceeEEEEcCCCC--CCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhC
Q 006938 174 AVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNED--SNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALG 251 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~~~~~S~~~~F~T~p~~--~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~ 251 (625)
|+|+||+|||+|+|||+. +.||++++|+|+|.. ..+++|+++||+|... ....++ +.+.+..
T Consensus 89 v~l~gL~p~t~Y~Yrv~~--g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~----------~~~~~l----~~i~~~~ 152 (426)
T 1xzw_A 89 CTIKDLEYDTKYYYRLGF--GDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTH----------DSNTTL----THYEQNS 152 (426)
T ss_dssp EEECCCCTTCEEEEEECC--GGGCEEEEEECCCCCCTTCCEEEEEECSCTTBH----------HHHHHH----HHHHHCT
T ss_pred EEECCCCCCCEEEEEECC--CCccceeEEECCCCCCCCCCeEEEEEEeCCCCC----------chHHHH----HHHHhCC
Confidence 999999999999999997 369999999999863 3568999999998641 112233 3343323
Q ss_pred CCCcEEEEcCccccCCCc----hhhHHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccc
Q 006938 252 DKPAFVSHIGDISYARGY----SWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYS 327 (625)
Q Consensus 252 ~~pdfvl~~GDivy~~g~----~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~ 327 (625)
.+|||||++||++|.++. ..+|+.|.+.++++.+.+|+++++||||+..... . + ..+....|.
T Consensus 153 ~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~-----~-----~---~~~~~~~~~ 219 (426)
T 1xzw_A 153 AKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPD-----I-----G---EYQPFVPFT 219 (426)
T ss_dssp TCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGG-----G-----T---BCSTTHHHH
T ss_pred CCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCCc-----c-----c---cccCChhhe
Confidence 489999999999998764 5679999999999888999999999999863210 0 0 012234577
Q ss_pred cccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCC
Q 006938 328 LKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTS 407 (625)
Q Consensus 328 ~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~ 407 (625)
.+|.||.+... ...+.||+|++|+++||+|||+.++..+.+|++||+++|+++++++.+|+||++|+|+|+..
T Consensus 220 ~~f~~p~~~~~-------~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~ 292 (426)
T 1xzw_A 220 NRYPTPHEASG-------SGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSY 292 (426)
T ss_dssp HHSCCCCGGGT-------CSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCB
T ss_pred EEEeCCcccCC-------CCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCC
Confidence 88999975321 13467999999999999999987777789999999999999877788999999999999875
Q ss_pred CCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCC--CCCCCCCCCcEEEEECCCCCCCCCCCC
Q 006938 408 NENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMG--MDGEPSEAFPVHIVIGMAGQDWQPIWQ 485 (625)
Q Consensus 408 ~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~--~~~~~~~~g~vyIv~G~gG~~~~~~~~ 485 (625)
..... ....+++.|+++|.+++||++|+||+|.|+|++|+.++++.... ...+.++++++||++|+||+.....
T Consensus 293 ~~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~~~-- 368 (426)
T 1xzw_A 293 EAHYM--EGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLA-- 368 (426)
T ss_dssp STTTT--TTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCC--
T ss_pred CcccC--CCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCccccccc--
Confidence 42211 12457899999999999999999999999999999887642111 1111236899999999999864211
Q ss_pred CCCCCCCCCCCCCCCccceeeCcccEEEEEE-eCCEEEEEEEECCCCc--EEEEEEEEec
Q 006938 486 PRPDHPDDPVFPQPMRSLYRGGEFGYTRLVA-TKEKLTLSYVGNHDGE--VHDMVEILAS 542 (625)
Q Consensus 486 ~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v-~~~~L~~~~i~~~dG~--v~D~f~I~k~ 542 (625)
.....++|+|++|+...+||++|++ +++++.++|+++.+|+ ++|+|+|.|.
T Consensus 369 ------~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~ 422 (426)
T 1xzw_A 369 ------SEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNR 422 (426)
T ss_dssp ------CCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECS
T ss_pred ------cccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEec
Confidence 0011257899999999999999999 7889999999988998 8999999985
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-57 Score=495.90 Aligned_cols=389 Identities=25% Similarity=0.392 Sum_probs=301.5
Q ss_pred CCCCceeEEEEecCCC-CceEEEEEecC-CCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 97 DGTGPRAGALGFTEDA-SEMRVMFLAED-GEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~-~~~~V~W~T~~-~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
+.+.|+||||++++++ ++|+|+|.|.+ ++.+.|+||+.++.+..++.|++.+|...+ ..++++|+|
T Consensus 15 ~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~------------~~~~~~~~v 82 (424)
T 2qfp_A 15 GYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFN------------YSSGFIHHT 82 (424)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSS------------CBCCEEEEE
T ss_pred CCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecC------------CCCCEEEEE
Confidence 5568999999999875 99999999976 568999999998877777777766665311 136899999
Q ss_pred EEcCCCCCcEEEEEEecCCCCcceeEEEEcCCCCC--CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCC
Q 006938 175 VIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDS--NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGD 252 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~~~~S~~~~F~T~p~~~--~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~ 252 (625)
+|+||+|||+|+|||+.+ +||++++|+|+|..+ .+++|+++||+|... .... +++.+.+...
T Consensus 83 ~l~gL~p~t~Y~Yrv~~~--~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~----------~~~~----~l~~~~~~~~ 146 (424)
T 2qfp_A 83 TIRKLKYNTKYYYEVGLR--NTTRRFSFITPPQTGLDVPYTFGLIGDLGQSF----------DSNT----TLSHYELSPK 146 (424)
T ss_dssp EECSCCTTCEEEEEECCS--SSCEEEEEECCCCCCTTCCEEEEEECSCTTBH----------HHHH----HHHHHHTCSS
T ss_pred EECCCCCCCEEEEEECCC--CccceEEEECCCCCCCCCCeEEEEEEeCCCCC----------ChHH----HHHHHHhCCC
Confidence 999999999999999975 689999999998643 468999999998752 1112 2333433224
Q ss_pred CCcEEEEcCccccCCCc----hhhHHHHHHhHHHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccc
Q 006938 253 KPAFVSHIGDISYARGY----SWLWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSL 328 (625)
Q Consensus 253 ~pdfvl~~GDivy~~g~----~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~ 328 (625)
+|||||++||++|.++. ...|+.|.+.++++.+.+|+++++||||+.... . .+. ......|..
T Consensus 147 ~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~-----~-----~~~---~~~~~~~~~ 213 (424)
T 2qfp_A 147 KGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAP-----E-----INE---TEPFKPFSY 213 (424)
T ss_dssp CCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBG-----G-----GTB---CSTTHHHHH
T ss_pred CCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCC-----c-----ccc---cccchhhhh
Confidence 89999999999998653 457999988898888899999999999986320 0 000 011234777
Q ss_pred ccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCC
Q 006938 329 KFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSN 408 (625)
Q Consensus 329 ~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~ 408 (625)
+|.||..... ...+.||+|++|+++||+||+...+..+.+|++||+++|+++++++.+|+||++|+|+++...
T Consensus 214 ~f~~P~~~~~-------~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~ 286 (424)
T 2qfp_A 214 RYHVPYEASQ-------STSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYN 286 (424)
T ss_dssp HCCCCGGGGT-------CSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBS
T ss_pred hccCCccccC-------CCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCc
Confidence 8888865321 134679999999999999999876656679999999999998777789999999999998653
Q ss_pred CCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCC--CCCCCCCCCCcEEEEECCCCCCCCCCCCC
Q 006938 409 ENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSM--GMDGEPSEAFPVHIVIGMAGQDWQPIWQP 486 (625)
Q Consensus 409 ~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~--~~~~~~~~~g~vyIv~G~gG~~~~~~~~~ 486 (625)
.... ....+++.|+++|.+++||++|+||+|.|+|++|+++...... ......++++++||++|+||+.....
T Consensus 287 ~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~~~--- 361 (424)
T 2qfp_A 287 HHFM--EGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVID--- 361 (424)
T ss_dssp TTTT--TTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCC---
T ss_pred cccc--ccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCccccC---
Confidence 2211 1245688999999999999999999999999999876543211 11111236899999999999864311
Q ss_pred CCCCCCCCCCCCCCccceeeCcccEEEEEE-eCCEEEEEEEECCCCcE--EEEEEEEecC
Q 006938 487 RPDHPDDPVFPQPMRSLYRGGEFGYTRLVA-TKEKLTLSYVGNHDGEV--HDMVEILASG 543 (625)
Q Consensus 487 ~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v-~~~~L~~~~i~~~dG~v--~D~f~I~k~~ 543 (625)
.....++|+|++|+...+||++|++ +++++.++|+++.+|++ .|+|+|.|.-
T Consensus 362 -----~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~ 416 (424)
T 2qfp_A 362 -----SNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRH 416 (424)
T ss_dssp -----CCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTT
T ss_pred -----ccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEecc
Confidence 0111357899999999999999999 78899999999899997 5999999864
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=327.09 Aligned_cols=367 Identities=15% Similarity=0.133 Sum_probs=231.0
Q ss_pred CceeEEEEecCCCCceEEEEEecCC----------CceEEEEE--ccCCCCCcEEEeeEEEEeeccccCCCCCCcccccC
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG----------EKRYVKYG--EKKDQMGHVAVASVERYERGQMCDKPANSSIGWRD 167 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~----------~~~~V~yg--~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~ 167 (625)
.|...-++.++...+..|.|....+ ....|+|. +++.....+..++..+.. +
T Consensus 7 ~~f~~GvasGDp~~~~vilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~~----------------~ 70 (527)
T 2yeq_A 7 YPFTLGVASGDPLSDSVVLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAKP----------------S 70 (527)
T ss_dssp CSCTTCEEEECCCSSCEEEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEECG----------------G
T ss_pred CCccccccccCCCCCeEEEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEecC----------------C
Confidence 3677778888875555588987643 23455554 444433333334333321 2
Q ss_pred CceEEEEEEcCCCCCcEEEEEEecCCCCcceeEEEEcCCCCC---CcceEEEEEecCCCCCCCcccccchhhHHHHHHHH
Q 006938 168 PGWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRNEDS---NETIAFLFGDMGAATPYTTFERTQDESISTMKWIL 244 (625)
Q Consensus 168 ~~~~h~a~ltgL~PgT~Y~YrV~~~~~~~S~~~~F~T~p~~~---~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~ 244 (625)
.+|+|+|.|+||+|||+|+|||+.++ .+|++++|+|+|..+ .+++|+++||.+....+ ...+.
T Consensus 71 ~~~t~~v~v~gL~P~t~Y~Yr~~~~~-~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~----------~~~~~--- 136 (527)
T 2yeq_A 71 LAHSVHVEADGLEPNKVYYYRFKTGH-ELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGY----------YTAYK--- 136 (527)
T ss_dssp GTTEEEEEECSCCTTCEEEEEEEETT-EECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCC----------CHHHH---
T ss_pred CceEEEeecCCcCCCCEEEEEEEeCC-CcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCc----------cHHHH---
Confidence 46899999999999999999999863 689999999999763 46899999987653211 12232
Q ss_pred HHHHHhCCCCcEEEEcCccccCCCch------------------------hhHHHHH--HhHHHhhcCCceEEccCCCCC
Q 006938 245 RDIEALGDKPAFVSHIGDISYARGYS------------------------WLWDEFF--ALIEPVASRVAYHVCIGNHEY 298 (625)
Q Consensus 245 ~~i~~~~~~pdfvl~~GDivy~~g~~------------------------~~wd~f~--~~l~~~~~~iP~~~v~GNHD~ 298 (625)
.+. +.+|||+||+||++|+++.. ..|..++ ..++.+.+.+|+|+++||||+
T Consensus 137 -~ia--~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~ 213 (527)
T 2yeq_A 137 -HMA--KEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEV 213 (527)
T ss_dssp -HHT--TSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTT
T ss_pred -HHH--hcCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccc
Confidence 232 35899999999999987532 1222222 235677889999999999999
Q ss_pred CCCCCCCCCCCCCCccCCCCCCcc-----cccccccc-ccCCCCC-CCCCCCCCCCCCceEEEEeCc-EEEEEEeCCccc
Q 006938 299 DWPLQPWKPDWSYTVYGTDGGGEC-----GVPYSLKF-HMPGNSL-EPTGTRAPATRNLYYSFDMGV-VHFVYISTETNF 370 (625)
Q Consensus 299 ~~~~~~~~~~~~~~~Y~~d~gge~-----~~~y~~~f-~~P~~~~-~~~G~~~~~~~~~yYsfd~G~-v~fI~LDT~~~~ 370 (625)
.++ |.... ......... ..++..+| .||.... .+.| .....||+|++|+ ++||+|||+...
T Consensus 214 ~nn---~~~~~----~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~----~~~~~y~sf~~G~lv~~i~LDtR~yr 282 (527)
T 2yeq_A 214 ENN---YANKI----PEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNG----PDMQLYRHFTYGNLASFNVLDTRQYR 282 (527)
T ss_dssp STT---CBTTB----CSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBT----TBCCCCEEEEETTTEEEEECCSSSSC
T ss_pred cCC---CCCCc----ccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCC----CCceEEEEEEcCCcceEEEEeccccc
Confidence 742 21110 000000000 01233344 3564321 1111 1346899999999 999999997422
Q ss_pred C----------------------CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCC--------CCChhhhHHHH
Q 006938 371 L----------------------QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNE--------NRDAPLRNRML 420 (625)
Q Consensus 371 ~----------------------~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~--------~~d~~~~~~~~ 420 (625)
. .+.+|++||+++|++ ++++|+||++|+|++..... .+.+......|
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R 359 (527)
T 2yeq_A 283 DDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQR 359 (527)
T ss_dssp CCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHH
T ss_pred cccccccccccccccccCCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHH
Confidence 1 368999999999997 67899999999999976432 12333445679
Q ss_pred HHHHHHHHHcCce--EEEEcCccCceeeeccCCccccCCCCCCCCCCC----CcEEEEECCCCCCCCCCCCCCCCCCCCC
Q 006938 421 EHLEPLFVENNVT--LALWGHVHRYERFCPLNNFTCGSMGMDGEPSEA----FPVHIVIGMAGQDWQPIWQPRPDHPDDP 494 (625)
Q Consensus 421 ~~l~~l~~ky~Vd--lvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~----g~vyIv~G~gG~~~~~~~~~~~~~~~~~ 494 (625)
++|.++|.+++|+ ++|+||+|.++++....+.. +++ ++-+++++........... .. ...
T Consensus 360 ~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~~----------~p~~~~~~~ef~~ssi~s~~~g~~~~---~~-~~~ 425 (527)
T 2yeq_A 360 ERVINFIKSKNLNNVVVLTGDVHASWASNLHVDFE----------KTSSKIFGAEFVGTSITSGGNGADKR---AD-TDQ 425 (527)
T ss_dssp HHHHHHHHHTTCCCEEEEECSSSSEEEEEEESSTT----------CTTSCEEEEEEECCCSSTTCSCBSBC---TT-HHH
T ss_pred HHHHHHHHHhCCCCEEEEEcchHHHhHhhcccccc----------CCCCCceEEEEEcCCeeCCCCcccch---hh-hhh
Confidence 9999999999984 99999999999986432210 122 2223322211111000000 00 000
Q ss_pred CCCCCCccceeeCcccEEEEEEeCCEEEEEEEE
Q 006938 495 VFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVG 527 (625)
Q Consensus 495 ~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i~ 527 (625)
+....++..|.....||++|++++++++++|+.
T Consensus 426 ~~~~np~~~~~~~~~Gy~~v~vt~~~~~~~~~~ 458 (527)
T 2yeq_A 426 ILKENPHIQFFNDYRGYVRCTVTPHQWKADYRV 458 (527)
T ss_dssp HHHHCTTEEEEEBCEEEEEEEEETTEEEEEEEE
T ss_pred hhhcCCcceeeeCCCCEEEEEEeccEEEEEEEE
Confidence 000112234555789999999999999999986
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=305.10 Aligned_cols=270 Identities=16% Similarity=0.232 Sum_probs=187.9
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC---chhhHHHHHHhHHH-h--h
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG---YSWLWDEFFALIEP-V--A 284 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g---~~~~wd~f~~~l~~-~--~ 284 (625)
.++|+++||+|.+.. .|... .+.|.+.+++ .+|||||++||++|.+. ...+|.+.|+.+.. . .
T Consensus 3 ~l~f~~igD~g~g~~------~q~~v---a~~m~~~~~~--~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~ 71 (342)
T 3tgh_A 3 QLRFASLGDWGKDTK------GQILN---AKYFKQFIKN--ERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGD 71 (342)
T ss_dssp CEEEEECCSCBSCCH------HHHHH---HHHHHHHHHH--TTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGT
T ss_pred eEEEEEEecCCCCCc------hHHHH---HHHHHHHHhh--cCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhh
Confidence 579999999998531 12222 2333333333 69999999999999832 14566665554422 2 3
Q ss_pred cCCceEEccCCCCCCCCCCCCCCCCCCCccCCCC-----CCccccccccccccCCCCCCCCCCCCCCCCCceEEE----E
Q 006938 285 SRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDG-----GGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSF----D 355 (625)
Q Consensus 285 ~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~-----gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsf----d 355 (625)
..+||++++||||+..+... .-.+...+|.... ..........||.||. .||+| .
T Consensus 72 ~~~P~~~vlGNHD~~~~~~a-q~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~---------------~yY~~~~~f~ 135 (342)
T 3tgh_A 72 MYMPFFTVLGTRDWTGNYNA-QLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN---------------YWYHYFTHFT 135 (342)
T ss_dssp TCSEEEECCCHHHHTSCHHH-HHHHHHC---------------CCCSSCEEECSS---------------SSEEEEEEEE
T ss_pred hCCCEEEeCCCCccCCCchH-hhhhhhcccccccccccccccccccCCCCccCCc---------------ceEEEEEEee
Confidence 57999999999999743100 0000000011000 0000112456788884 37765 3
Q ss_pred e---------C----cEEEEEEeCCcccC----------CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCC
Q 006938 356 M---------G----VVHFVYISTETNFL----------QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRD 412 (625)
Q Consensus 356 ~---------G----~v~fI~LDT~~~~~----------~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d 412 (625)
. | .++||+|||..... ..++|++||+++|+. ++|+||++|+|+|+...+...
T Consensus 136 ~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~~~~ 210 (342)
T 3tgh_A 136 VSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYSRGS 210 (342)
T ss_dssp EC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTTCCC
T ss_pred ccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCCCCc
Confidence 2 3 49999999963211 135899999999943 489999999999998765432
Q ss_pred hhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCC
Q 006938 413 APLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPD 492 (625)
Q Consensus 413 ~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~ 492 (625)
..+++.|+++|.+|+|+++|+||+|.|+|..+ +++.||++|++|..+...
T Consensus 211 ----~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~-----------------~g~~~iv~Ga~g~~~~~~--------- 260 (342)
T 3tgh_A 211 ----SYLAYYLLPLLKDAEVDLYISGHDNNMEVIED-----------------NDMAHITCGSGSMSQGKS--------- 260 (342)
T ss_dssp ----HHHHHHTHHHHHHTTCCEEEECSSSSEEEEEE-----------------TTEEEEEECCSSCCCCCC---------
T ss_pred ----HHHHHHHHHHHHHcCCCEEEECCCcceeEEee-----------------CCcEEEEeCccccccccC---------
Confidence 35688999999999999999999999999874 568999999988764311
Q ss_pred CCCCCCCCccceeeCcccEEEEEEeCCEEEEEEEECCCCcEEEEEEEEecCcc
Q 006938 493 DPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASGQV 545 (625)
Q Consensus 493 ~~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v~D~f~I~k~~~~ 545 (625)
...++|+.|+...+||.++++++++|+++|+.+.+|+++|+|+|.|+...
T Consensus 261 ---~~~~~~s~f~~~~~Gf~~l~v~~~~l~~~~~~~~~G~vld~~~i~k~~~~ 310 (342)
T 3tgh_A 261 ---GMKNSKSLFFSSDIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLNIKKKK 310 (342)
T ss_dssp ---SSCCTTEEEEECSSEEEEEEEETTEEEEEEEETTTTEEEEEEEEECCCCS
T ss_pred ---CCCCCcceeecCCCcEEEEEEECCEEEEEEEECCCCcEEEEEEEECCCCc
Confidence 02356888888999999999999999999996689999999999997654
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=260.56 Aligned_cols=266 Identities=21% Similarity=0.297 Sum_probs=176.1
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHH-HHHHhHHHh----h
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWD-EFFALIEPV----A 284 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd-~f~~~l~~~----~ 284 (625)
+.++|+++||+|...... +.. .......+.+.+.+++ .+|||||++||++|..+....++ +|.+.++.+ .
T Consensus 5 ~~~~~~~isD~h~~~~~~-~~~--~~~~~~~~~l~~~~~~--~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~ 79 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAP-FHT--AREMANAKAIATTVKT--LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPS 79 (313)
T ss_dssp CCEEEEEECSCCCCSSTT-SSC--HHHHHHHHHHHHHHHH--HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGG
T ss_pred CceEEEEEcccCCCCCcc-ccC--chHHHHHHHHHHHHHh--cCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchh
Confidence 568999999999875321 110 1111222333332333 48999999999998754321111 233333322 1
Q ss_pred c-CCceEEccCCCCCCCCCCCCCCCCCCC-ccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEe------
Q 006938 285 S-RVAYHVCIGNHEYDWPLQPWKPDWSYT-VYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDM------ 356 (625)
Q Consensus 285 ~-~iP~~~v~GNHD~~~~~~~~~~~~~~~-~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~------ 356 (625)
. .+|+++++||||+.... ... .|. ....+|.+| ..||++++
T Consensus 80 l~~~p~~~v~GNHD~~~~~-------~~~~~~~---------~~~~~~~~~---------------~~~y~~~~~~~~~~ 128 (313)
T 1ute_A 80 LRNVPWHVLAGNHDHLGNV-------SAQIAYS---------KISKRWNFP---------------SPYYRLRFKIPRSN 128 (313)
T ss_dssp GTTCCEEECCCHHHHHSCH-------HHHHHGG---------GTSTTEECC---------------SSSEEEEEECTTSS
T ss_pred hcCCCEEEECCCCccCCCc-------ccccccc---------ccCCCccCc---------------ccceEEEEecCCCC
Confidence 3 79999999999985310 000 010 012234444 24888888
Q ss_pred CcEEEEEEeCCccc-----------------CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHH
Q 006938 357 GVVHFVYISTETNF-----------------LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRM 419 (625)
Q Consensus 357 G~v~fI~LDT~~~~-----------------~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~ 419 (625)
++++||+||+.... ..+.+|++||+++|++. ..+|+||++|+|++....+... ..+
T Consensus 129 ~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~~~~~~~~~~----~~~ 201 (313)
T 1ute_A 129 VSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEHGPT----HCL 201 (313)
T ss_dssp CEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSSCCC----HHH
T ss_pred ceEEEEEEEChHHhCcCccccccccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCCccCCCCCCc----HHH
Confidence 58999999985310 12478999999999984 3489999999999987654332 345
Q ss_pred HHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q 006938 420 LEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQP 499 (625)
Q Consensus 420 ~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p 499 (625)
++.|.++|.+++|+++|+||+|.+++..+ .+++.||++|++|...... .+... .+ .
T Consensus 202 ~~~l~~~l~~~~v~~~l~GH~H~~~~~~~----------------~~g~~~i~~gs~~~~~~~~-----~~~~~--~~-~ 257 (313)
T 1ute_A 202 VKQLLPLLTTHKVTAYLCGHDHNLQYLQD----------------ENGLGFVLSGAGNFMDPSK-----KHLRK--VP-N 257 (313)
T ss_dssp HHHTHHHHHHTTCSEEEECSSSSEEEEEC----------------TTCCEEEEECBSSCCCCCC-----TTGGG--SC-T
T ss_pred HHHHHHHHHHcCCcEEEECChhhhhhccC----------------CCCceEEEECCCcCcCccc-----ccccc--CC-C
Confidence 67899999999999999999999998863 2578899999888643210 11000 01 1
Q ss_pred Cccceee----CcccEEEEEEeCCEEEEEEEECCCCcEEEEEEEEecC
Q 006938 500 MRSLYRG----GEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILASG 543 (625)
Q Consensus 500 ~ws~~~~----~~~Gy~~v~v~~~~L~~~~i~~~dG~v~D~f~I~k~~ 543 (625)
.+..|.. ..+||.+|+++++.++++++. .+|+++|+++|.|+.
T Consensus 258 ~~~~~~~~~~~~~~gy~~l~v~~~~~~~~~~~-~~g~~~~~~~l~~~~ 304 (313)
T 1ute_A 258 GYLRFHFGAENSLGGFAYVEITPKEMSVTYIE-ASGKSLFKTKLPRRA 304 (313)
T ss_dssp TCEEEEECCTTSCCEEEEEEECSSCEEEEEEE-TTSCEEEEEEECCCC
T ss_pred cccceeccCcCCCCceEEEEEEcCEEEEEEEc-CCCcEEEEEEecccc
Confidence 2333432 237999999999999999996 599999999998864
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-22 Score=207.50 Aligned_cols=264 Identities=13% Similarity=0.072 Sum_probs=172.5
Q ss_pred EEcCCCCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHH
Q 006938 202 FVSRNEDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIE 281 (625)
Q Consensus 202 F~T~p~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~ 281 (625)
++.++.+...++|++++|+|.......... .......++.+++.+++...++|+||++||+++.+ ....|+.+.+.++
T Consensus 16 l~~~~~~~~~~ri~~iSD~H~~~~~~~~~~-~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~-~~~~~~~~~~~l~ 93 (330)
T 3ib7_A 16 LRAAEHPRPDYVLLHISDTHLIGGDRRLYG-AVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKG-EPAAYRKLRGLVE 93 (330)
T ss_dssp CEECSSCCCSEEEEEECCCCBCSSSCCBTT-TBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTC-CHHHHHHHHHHHH
T ss_pred cccccCCCCCeEEEEEeCCccCCCCccccc-ccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC-CHHHHHHHHHHHH
Confidence 344444456789999999998654321110 11234567777877766557999999999998754 3456666666666
Q ss_pred Hhh--cCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcE
Q 006938 282 PVA--SRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVV 359 (625)
Q Consensus 282 ~~~--~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v 359 (625)
.+. ..+|+++++||||+... +...+.-... .....+|+++++++
T Consensus 94 ~l~~~~~~pv~~v~GNHD~~~~------------------------~~~~~~~~~~----------~~~~~~~~~~~~~~ 139 (330)
T 3ib7_A 94 PFAAQLGAELVWVMGNHDDRAE------------------------LRKFLLDEAP----------SMAPLDRVCMIDGL 139 (330)
T ss_dssp HHHHHHTCEEEECCCTTSCHHH------------------------HHHHHHCCCC----------CCSCCCEEEEETTE
T ss_pred HHHhhcCCCEEEeCCCCCCHHH------------------------HHHHhccccc----------ccCCcceEEEeCCE
Confidence 653 37999999999997410 1111210000 11346899999999
Q ss_pred EEEEEeCCccc----CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEE
Q 006938 360 HFVYISTETNF----LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLA 435 (625)
Q Consensus 360 ~fI~LDT~~~~----~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~Vdlv 435 (625)
+|++||+.... ....+|++||++.|+.... ..+|+++|||++.......+. ......+.+.+++.+++|+++
T Consensus 140 ~~i~lds~~~~~~~~~~~~~q~~wl~~~l~~~~~---~~~iv~~Hh~p~~~~~~~~~~-~~~~~~~~l~~~l~~~~v~~v 215 (330)
T 3ib7_A 140 RIIVLDTSVPGHHHGEIRASQLGWLAEELATPAP---DGTILALHHPPIPSVLDMAVT-VELRDQAALGRVLRGTDVRAI 215 (330)
T ss_dssp EEEECCCCCTTCCSBCCCHHHHHHHHHHTTSCCT---TCEEEECSSCSSCCSSGGGGG-GSBSCHHHHHHHHTTSSEEEE
T ss_pred EEEEecCCCCCCCCCccCHHHHHHHHHHHHhccc---CCeEEEEECCCCCCCcccccc-ccccCHHHHHHHHhccCceEE
Confidence 99999986421 2468999999999988542 237888898887654221111 111125678899999999999
Q ss_pred EEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEE
Q 006938 436 LWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLV 515 (625)
Q Consensus 436 lsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~ 515 (625)
|+||+|..+... .++..+++.|+.+........ ...........||.+|+
T Consensus 216 ~~GH~H~~~~~~-----------------~~g~~~~~~gs~~~~~~~~~~-------------~g~~~~~~~~~gy~iv~ 265 (330)
T 3ib7_A 216 LAGHLHYSTNAT-----------------FVGIPVSVASATCYTQDLTVA-------------AGGTRGRDGAQGCNLVH 265 (330)
T ss_dssp EECSSSSCEEEE-----------------ETTEEEEECCCSSCEECTTSC-------------TTCCCEESCSCEEEEEE
T ss_pred EECCCCCcccce-----------------ECCEEEEecCcceeccCCCCC-------------CcceeccCCCCceEEEE
Confidence 999999987543 155667777766644321100 00111224557999999
Q ss_pred EeCCEEEEEEEECCCCcEEE
Q 006938 516 ATKEKLTLSYVGNHDGEVHD 535 (625)
Q Consensus 516 v~~~~L~~~~i~~~dG~v~D 535 (625)
++++.++++++....+....
T Consensus 266 i~~~~~~~~~v~~~~~~~~~ 285 (330)
T 3ib7_A 266 VYPDTVVHSVIPLGGGETVG 285 (330)
T ss_dssp ECSSCEEEEEEECSCCCCCS
T ss_pred EECCCeEEEEeccCCCCCcc
Confidence 99999999999754444333
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=191.50 Aligned_cols=247 Identities=11% Similarity=0.024 Sum_probs=157.6
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
.+|++++|+|.......... .......++.+++.+++...++|+||++||+++.+ ....|+.+.+.++.+ .+|+++
T Consensus 1 mri~~iSD~H~~~~~~~~~g-~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~-~~~~~~~~~~~l~~l--~~p~~~ 76 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYG-FIDVNAANADVVSQLNALRERPDAVVVSGDIVNCG-RPEEYQVARQILGSL--NYPLYL 76 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTT-TBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSC-CHHHHHHHHHHHTTC--SSCEEE
T ss_pred CEEEEEecCCcCCCCccccc-ccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC-CHHHHHHHHHHHHhc--CCCEEE
Confidence 37899999998743211000 01234567777777766545799999999998754 344566665555543 689999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccc-ccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCccc
Q 006938 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKF-HMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNF 370 (625)
Q Consensus 292 v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f-~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~ 370 (625)
++||||.... +. ..+...| .++.+ .+..+|+++.++++|++||+....
T Consensus 77 v~GNHD~~~~------------~~--------~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~ld~~~~~ 125 (274)
T 3d03_A 77 IPGNHDDKAL------------FL--------EYLQPLCPQLGSD-----------ANNMRCAVDDFATRLLFIDSSRAG 125 (274)
T ss_dssp ECCTTSCHHH------------HH--------HHHGGGSGGGCSC-----------GGGCCEEECSSSSEEEECCCCCTT
T ss_pred ECCCCCCHHH------------HH--------HHhhhhhcCcccC-----------CCceEEEEEeCCEEEEEEeCCCCC
Confidence 9999998410 00 0011111 11111 013578999999999999986421
Q ss_pred ----CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc-CceEEEEcCccCcee
Q 006938 371 ----LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN-NVTLALWGHVHRYER 445 (625)
Q Consensus 371 ----~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky-~VdlvlsGH~H~yeR 445 (625)
....+|++||++.|++. +..++|+++|+|++.......+. ......+.+.+++.++ +|+++|+||+|.++.
T Consensus 126 ~~~~~~~~~~~~wl~~~l~~~---~~~~~iv~~H~p~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~ 201 (274)
T 3d03_A 126 TSKGWLTDETISWLEAQLFEG---GDKPATIFMHHPPLPLGNAQMDP-IACENGHRLLALVERFPSLTRIFCGHNHSLTM 201 (274)
T ss_dssp CSSBCCCHHHHHHHHHHHHHH---TTSCEEEEESSCSSCCSCTTTGG-GSBTTTHHHHHHHHHCTTEEEEEECSSSSCEE
T ss_pred CCCCeeCHHHHHHHHHHHHhC---CCCCEEEEECCCCcccCCcccCc-ccCcCHHHHHHHHHhCCCceEEEeCCCCCchh
Confidence 24589999999999874 23569999999998764322111 0111245788999999 899999999999876
Q ss_pred eeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCc-cceeeCcccEEEEEEeCCEEEEE
Q 006938 446 FCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMR-SLYRGGEFGYTRLVATKEKLTLS 524 (625)
Q Consensus 446 ~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~w-s~~~~~~~Gy~~v~v~~~~L~~~ 524 (625)
... ++..++++++.+...... .+.+ +.+.....||.++++++++++++
T Consensus 202 ~~~-----------------~g~~~~~~pg~~~~~~~~--------------~~~~~~~~~~~~~gy~i~~i~~~~~~~~ 250 (274)
T 3d03_A 202 TQY-----------------RQALISTLPGTVHQVPYC--------------HADTDPYYDLSPASCLMHRQVGEQWVSY 250 (274)
T ss_dssp EEE-----------------TTEEEEECCCSSCBCCCC--------------SSCCSCEEBCCCCEEEEEEEETTEEEEE
T ss_pred heE-----------------CCEEEEEcCCcceeeccC--------------CCccccccccCCCceEEEEEeCCcEEEE
Confidence 531 343455554433221110 0011 12334567999999999999999
Q ss_pred EEEC
Q 006938 525 YVGN 528 (625)
Q Consensus 525 ~i~~ 528 (625)
++..
T Consensus 251 ~~~~ 254 (274)
T 3d03_A 251 QHSL 254 (274)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8864
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.8e-21 Score=198.45 Aligned_cols=249 Identities=16% Similarity=0.121 Sum_probs=153.2
Q ss_pred CcceEEEEEecCCCCCCCccc------ccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCc-----hhhHHHHHH
Q 006938 210 NETIAFLFGDMGAATPYTTFE------RTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY-----SWLWDEFFA 278 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~------~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~-----~~~wd~f~~ 278 (625)
..++|++++|+|......... +........++.+++.+++ .+|||||++||+++.... ...++.+.+
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~ 81 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRR--ERVQCVVQLGDIIDGHNRRRDASDRALDTVMA 81 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBCTHHHHTTCHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHh--cCCCEEEECCCccCCCCCcchHHHHHHHHHHH
Confidence 458999999999876421110 1112234556666666654 689999999999986431 122333333
Q ss_pred hHHHhhcCCceEEccCCCCCCCCC-CCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEe-
Q 006938 279 LIEPVASRVAYHVCIGNHEYDWPL-QPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDM- 356 (625)
Q Consensus 279 ~l~~~~~~iP~~~v~GNHD~~~~~-~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~- 356 (625)
.++. ..+|+++++||||+.... ..+...+.. .. ......+ ...+|. .+..||+|+.
T Consensus 82 ~l~~--~~~p~~~v~GNHD~~~~~~~~~~~~~~~-----~~-~~~~~~~--~~~~~~------------~~~~~y~~~~~ 139 (322)
T 2nxf_A 82 ELDA--CSVDVHHVWGNHEFYNFSRPSLLSSRLN-----SA-QRTGTDT--GSDLIG------------DDIYAYEFSPA 139 (322)
T ss_dssp HHHT--TCSEEEECCCHHHHHHCCHHHHHTSTTC-----CC-C--------CEECGG------------GTCCCEEEEEE
T ss_pred HHHh--cCCcEEEecCCCCcccCCHHHHhhhhCC-----cc-ccccccc--ccccCC------------CCceEEEEecC
Confidence 3332 368999999999983100 000000000 00 0000000 001221 1346899998
Q ss_pred CcEEEEEEeCCcc----------------------------------------------cCCChHHHHHHHHHhhccccC
Q 006938 357 GVVHFVYISTETN----------------------------------------------FLQGSNQYNFIKHDLESVDRK 390 (625)
Q Consensus 357 G~v~fI~LDT~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~r~ 390 (625)
++++||+||+... .....+|++||+++|+++.+.
T Consensus 140 ~~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~ 219 (322)
T 2nxf_A 140 PNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK 219 (322)
T ss_dssp TTEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc
Confidence 9999999998641 012378999999999986432
Q ss_pred CCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc-CceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcE
Q 006938 391 KTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN-NVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPV 469 (625)
Q Consensus 391 ~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky-~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~v 469 (625)
..++||++|+|++........ .....+.+.+++.++ +|+++|+||+|.+++... .+++.
T Consensus 220 -~~~~iv~~H~p~~~~~~~~~~---~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~----------------~~g~~ 279 (322)
T 2nxf_A 220 -QERVLIFSHLPVHPCAADPIC---LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD----------------SSGAQ 279 (322)
T ss_dssp -TCEEEEEESSCCCTTSSCGGG---SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC----------------TTSCE
T ss_pred -CCcEEEEEccCCCCCCCCccc---cccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec----------------cCCce
Confidence 345899999999876532100 001246788999999 799999999999988641 14566
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEeCCEEEEEEEE
Q 006938 470 HIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVG 527 (625)
Q Consensus 470 yIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i~ 527 (625)
|++.|+.-.. + ....||.+++++++.++++.+.
T Consensus 280 ~i~~~~~~~~-----------------~--------~~~~~y~~v~~~~~~~~~~~~~ 312 (322)
T 2nxf_A 280 HITLEGVIET-----------------P--------PHSHAFATAYLYEDRMVMKGRG 312 (322)
T ss_dssp EEECCCGGGC-----------------C--------TTSCEEEEEEECSSEEEEEEEE
T ss_pred EEEecchhhC-----------------C--------CCCCcEEEEEEECCeEEEEecc
Confidence 7766644110 0 1235899999999999998875
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.7e-16 Score=170.69 Aligned_cols=225 Identities=15% Similarity=0.135 Sum_probs=130.1
Q ss_pred CCcceEEEEEecCCCCCCCc-----c--------cccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHH
Q 006938 209 SNETIAFLFGDMGAATPYTT-----F--------ERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDE 275 (625)
Q Consensus 209 ~~~~~f~v~GD~g~~~~~~~-----~--------~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~ 275 (625)
...++|++++|+|....... + .+........++.+++.+++ .+||+||++||+++.+. ...++.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~d~vi~~GDl~~~~~-~~~~~~ 113 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVES--KKTDVLIISGDLTNNGE-KTSHEE 113 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHH--HTCSEEEEESCCBSSCC-HHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHH--cCCCEEEECCCCCCCCC-HHHHHH
Confidence 35689999999998643100 0 00000124556777776654 47999999999997553 334566
Q ss_pred HHHhHHHhh-cCCceEEccCCCCCCCCCCCCCCCCCC-CccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEE
Q 006938 276 FFALIEPVA-SRVAYHVCIGNHEYDWPLQPWKPDWSY-TVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYS 353 (625)
Q Consensus 276 f~~~l~~~~-~~iP~~~v~GNHD~~~~~~~~~~~~~~-~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYs 353 (625)
+.+.++.+. ..+|+++++||||+..... ..+.. ..+..+. .....|...|.-.+.... ... ......|+.
T Consensus 114 ~~~~l~~l~~~~~~~~~v~GNHD~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~--~~~~~~y~~ 185 (443)
T 2xmo_A 114 LAKKLTQVEKNGTQVFVVPGNHDINNPWA---RKFEKDKQLPTDT--ISPTDFSKIYSDFGYEDA-ISS--DEFSLSYLA 185 (443)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTTSSCTTC---EEEETTEEEECCC--CCHHHHHHHTCCCCCTTC-SEE--CSSSSCEEE
T ss_pred HHHHHHHHHhCCCeEEEECCcCCCCCccc---cccCCcccccccc--cCHHHHHHHhhhcChhhh-hcc--CCCCceEEE
Confidence 656665553 3789999999999863210 00000 0000000 000012222211000000 000 001123555
Q ss_pred EEeCcEEEEEEeCCcc------------cCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHH
Q 006938 354 FDMGVVHFVYISTETN------------FLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLE 421 (625)
Q Consensus 354 fd~G~v~fI~LDT~~~------------~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~ 421 (625)
+..++++||+||+... .....+|++||++.|+++.... ..+|+++|+|++.......+. ......+
T Consensus 186 ~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~-~~~Iv~~H~p~~~~~~~~~~~-~~~~~~~ 263 (443)
T 2xmo_A 186 APSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNG-AKLIPVLHHNLTDHNDVIQKG-YTINYNQ 263 (443)
T ss_dssp CSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTT-CEEEEECSSBSSCSSCC--CC-SBCTTHH
T ss_pred ecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcC-CeEEEEECCCCcccccccccc-cccccHH
Confidence 5688999999998642 1235799999999998865322 458999999998653211110 0011246
Q ss_pred HHHHHHHHcCceEEEEcCccCceee
Q 006938 422 HLEPLFVENNVTLALWGHVHRYERF 446 (625)
Q Consensus 422 ~l~~l~~ky~VdlvlsGH~H~yeR~ 446 (625)
.+.+++.+++|+++|+||+|.....
T Consensus 264 ~l~~ll~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 264 QVIDALTEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHHHHHHHTTCCEEEECSSCSCEEE
T ss_pred HHHHHHHHcCCeEEEECCcccCchh
Confidence 7889999999999999999997764
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.45 E-value=3.5e-12 Score=125.30 Aligned_cols=171 Identities=9% Similarity=-0.006 Sum_probs=99.6
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceE
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYH 290 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~ 290 (625)
..++++++|+|... ..++.+++.+++ .+||+||++||+++.......+..+++.++. ..+|++
T Consensus 5 ~mri~~iSD~H~~~-------------~~~~~~~~~~~~--~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~--~~~pv~ 67 (228)
T 1uf3_A 5 VRYILATSNPMGDL-------------EALEKFVKLAPD--TGADAIALIGNLMPKAAKSRDYAAFFRILSE--AHLPTA 67 (228)
T ss_dssp CCEEEEEECCTTCH-------------HHHHHHHTHHHH--HTCSEEEEESCSSCTTCCHHHHHHHHHHHGG--GCSCEE
T ss_pred eEEEEEEeeccCCH-------------HHHHHHHHHHhh--cCCCEEEECCCCCCCCCCHHHHHHHHHHHHh--cCCcEE
Confidence 36899999999751 234455555543 3799999999998765344444555555543 268999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccc----ccCCCCCCCCCCCCCCCCCceEEEEeC-cEEEEEEe
Q 006938 291 VCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKF----HMPGNSLEPTGTRAPATRNLYYSFDMG-VVHFVYIS 365 (625)
Q Consensus 291 ~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f----~~P~~~~~~~G~~~~~~~~~yYsfd~G-~v~fI~LD 365 (625)
+++||||.... . + +...+ ..|.... ..+. .+.++ ++.|+.++
T Consensus 68 ~v~GNHD~~~~---------~--~-----------~~~~~~~~~~~~~~~~---------l~~~--~~~~~~~~~i~g~~ 114 (228)
T 1uf3_A 68 YVPGPQDAPIW---------E--Y-----------LREAANVELVHPEMRN---------VHET--FTFWRGPYLVAGVG 114 (228)
T ss_dssp EECCTTSCSHH---------H--H-----------HHHHHHHHHHCTTEEE---------CBTS--EEEETTTEEEEEEC
T ss_pred EECCCCCchhH---------H--H-----------HHhhhhhhccCcceEE---------cccc--eEeeCCCcEEecCC
Confidence 99999997410 0 0 00010 0111000 0011 24455 78898887
Q ss_pred CCc--ccCCChH--------HHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEE
Q 006938 366 TET--NFLQGSN--------QYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLA 435 (625)
Q Consensus 366 T~~--~~~~~~~--------Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~Vdlv 435 (625)
... .+...++ +.+|+++.|++.. ..+.|++.|+|++........ .+.+.+++.+++++++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~il~~H~p~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 184 (228)
T 1uf3_A 115 GEIADEGEPEEHEALRYPAWVAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQG-------SHEVAHLIKTHNPLLV 184 (228)
T ss_dssp SEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTTS-------BHHHHHHHHHHCCSEE
T ss_pred CCcCCCCccChhhcccchhhhHHHHHHHHHhCC---CCCeEEEEccCcccCCccccC-------HHHHHHHHHHhCCCEE
Confidence 421 1111122 3344455555532 235899999998764111111 1345667888899999
Q ss_pred EEcCcc
Q 006938 436 LWGHVH 441 (625)
Q Consensus 436 lsGH~H 441 (625)
++||+|
T Consensus 185 ~~GH~H 190 (228)
T 1uf3_A 185 LVAGKG 190 (228)
T ss_dssp EECCSS
T ss_pred EEcccc
Confidence 999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.37 E-value=5.1e-12 Score=127.22 Aligned_cols=185 Identities=8% Similarity=0.022 Sum_probs=95.3
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhh---------------H--
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWL---------------W-- 273 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~---------------w-- 273 (625)
..++++++|.|.... .++.+++.+++ .+||+||++||+++....... +
T Consensus 5 ~mri~~iSDlH~~~~-------------~~~~~l~~~~~--~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~ 69 (260)
T 2yvt_A 5 PRKVLAIKNFKERFD-------------LLPKLKGVIAE--KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHE 69 (260)
T ss_dssp CCEEEEEECCTTCGG-------------GHHHHHHHHHH--HCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHH
T ss_pred eEEEEEEeecCCChH-------------HHHHHHHHHHh--cCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhH
Confidence 468999999998621 23445555543 489999999999875422100 0
Q ss_pred ------HHHHHhHHHhhc-CCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCC
Q 006938 274 ------DEFFALIEPVAS-RVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPA 346 (625)
Q Consensus 274 ------d~f~~~l~~~~~-~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~ 346 (625)
+.+.+.++.+.. .+|+++++||||..... + +...+......+ +. .
T Consensus 70 ~~~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~~-----------~-----------~~~~~~~~~~~~---~~---~ 121 (260)
T 2yvt_A 70 NEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKI-----------F-----------LRAAYEAETAYP---NI---R 121 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHH-----------H-----------HHHHHHTTTTCT---TE---E
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhhh-----------h-----------HHHHhhhccCCc---ce---E
Confidence 112222333332 68999999999974100 0 000000000000 00 0
Q ss_pred CCCceEEEEeCcEEEEEEeCCccc-CCChHHHH----HHH----HHhhccccCCCCeEEEEcccCCccCCCCCCChhhhH
Q 006938 347 TRNLYYSFDMGVVHFVYISTETNF-LQGSNQYN----FIK----HDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRN 417 (625)
Q Consensus 347 ~~~~yYsfd~G~v~fI~LDT~~~~-~~~~~Q~~----WL~----~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~ 417 (625)
.......++++++.|+.++..... ...++|+. |+. +.|++.. + ...|++.|+|++.............
T Consensus 122 ~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~ 198 (260)
T 2yvt_A 122 VLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKH 198 (260)
T ss_dssp ECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEHHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCC
T ss_pred EecCcceEEECCEEEEecCCCcCCCCcCHHHHhhcchhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccc
Confidence 000112367889999999753210 01112222 433 3333321 2 2368889999875311100000000
Q ss_pred HHHHHHHHHHHHcCceEEEEcCcc
Q 006938 418 RMLEHLEPLFVENNVTLALWGHVH 441 (625)
Q Consensus 418 ~~~~~l~~l~~ky~VdlvlsGH~H 441 (625)
...+.+.+++.+++++++++||+|
T Consensus 199 ~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 199 HGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp CSCHHHHHHHHHHCCSEEEECSSC
T ss_pred cCcHHHHHHHHHhCCCEEEECCcc
Confidence 001356677888899999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.4e-11 Score=129.59 Aligned_cols=255 Identities=12% Similarity=0.055 Sum_probs=131.1
Q ss_pred CcceEEEEEecCCC----CCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCc-cccCCCc-hhhHHHHHHhHHHh
Q 006938 210 NETIAFLFGDMGAA----TPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGD-ISYARGY-SWLWDEFFALIEPV 283 (625)
Q Consensus 210 ~~~~f~v~GD~g~~----~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GD-ivy~~g~-~~~wd~f~~~l~~~ 283 (625)
+..+|+.++|+|.+ .......+ ..+....++++++.+++ .+||+||++|| +++.... ......+.+.++.+
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r-~~~~~~~l~~lv~~~~~--~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L 93 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDR-REELKKALDKVVEEAEK--REVDLILLTGDLLHSRNNPSVVALHDLLDYLKRM 93 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEEC-HHHHHHHHHHHHHHHHH--HTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcCh-hHHHHHHHHHHHHHHHH--hCCCEEEECCccccCCCCCCHHHHHHHHHHHHHH
Confidence 56899999999976 22111111 11224567777777665 48999999999 6543322 22234455555555
Q ss_pred hcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccc----cccCCCCCCCCCCCCCCCCCceEEEEeCcE
Q 006938 284 ASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLK----FHMPGNSLEPTGTRAPATRNLYYSFDMGVV 359 (625)
Q Consensus 284 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~----f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v 359 (625)
...+|+++++||||... ... + ..+... +.+..+.. ....+.++.+++
T Consensus 94 ~~~~pv~~i~GNHD~~~-~~~---------~---------~~~l~~~g~nv~v~~~~~----------~~~~~~~~~~~v 144 (336)
T 2q8u_A 94 MRTAPVVVLPGNHDWKG-LKL---------F---------GNFVTSISSDITFVMSFE----------PVDVEAKRGQKV 144 (336)
T ss_dssp HHHSCEEECCC-------CHH---------H---------HHHHHHHCSSEEECCSSS----------CEEEECTTSCEE
T ss_pred HhcCCEEEECCCCCccc-ccc---------H---------HHHHHhcCCEEEEEeccc----------ccCceEEeCCCE
Confidence 43389999999999852 100 0 001100 11111100 000111234668
Q ss_pred EEEEEeCCccc-------CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCc
Q 006938 360 HFVYISTETNF-------LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNV 432 (625)
Q Consensus 360 ~fI~LDT~~~~-------~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~V 432 (625)
.|+.++..... ....+|++|+.+.|...-++...+.|+++|.|++............ ...+...+.+.++
T Consensus 145 ~i~glp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~~~~~~~---~~~v~~~l~~~~~ 221 (336)
T 2q8u_A 145 RILPFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQGR---EIIINRALIPSVV 221 (336)
T ss_dssp EEEEECCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC--------C---CCEECGGGSCTTS
T ss_pred EEEECCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCCCccchh---hcccCHHHccccC
Confidence 88888643211 1124688999888865210234579999999987532111000000 0001112334689
Q ss_pred eEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEE
Q 006938 433 TLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYT 512 (625)
Q Consensus 433 dlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~ 512 (625)
|++++||.|..+... ..+..+..|+.... .+.. .....||.
T Consensus 222 d~v~~GH~H~~~~~~------------------~~~~i~y~GS~~~~--------------------s~~e-~~~~~~~~ 262 (336)
T 2q8u_A 222 DYAALGHIHSFREIQ------------------KQPLTIYPGSLIRI--------------------DFGE-EADEKGAV 262 (336)
T ss_dssp SEEEEESCSSCEEEE------------------ETTEEEECCCSSCC--------------------SGGG-TTCCCEEE
T ss_pred CEEEEccccCceEeC------------------CCccEEECCCCcCC--------------------Cccc-cCCCCEEE
Confidence 999999999987652 11122223322110 0000 01246999
Q ss_pred EEEEeCC-EEEEEEEECCCCcEEEEEEE
Q 006938 513 RLVATKE-KLTLSYVGNHDGEVHDMVEI 539 (625)
Q Consensus 513 ~v~v~~~-~L~~~~i~~~dG~v~D~f~I 539 (625)
.|+++++ .++++++.... ..+-++.|
T Consensus 263 lv~i~~~~~~~v~~i~~~~-r~~~~~~~ 289 (336)
T 2q8u_A 263 FVELKRGEPPRYERIDASP-LPLKTLYY 289 (336)
T ss_dssp EEEEETTSCCEEEEEECCC-CCEEEEEE
T ss_pred EEEEeCCCccEEEEEECCC-EEEEEeec
Confidence 9999865 58889987554 66677666
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=6.5e-10 Score=119.28 Aligned_cols=91 Identities=14% Similarity=0.151 Sum_probs=58.1
Q ss_pred CCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCc-hhhHHHHHHhHHHhhc
Q 006938 207 EDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY-SWLWDEFFALIEPVAS 285 (625)
Q Consensus 207 ~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~-~~~wd~f~~~l~~~~~ 285 (625)
......+|++++|+|.+................++++++.+. ..+||+||++||++..... ...+..+.+.++.+..
T Consensus 16 ~~~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~--~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 16 PRGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKIL--EIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHE 93 (386)
T ss_dssp --CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHH--TTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHH--HcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 334568999999999874311110001112345666666554 4689999999999765532 2344556666666643
Q ss_pred -CCceEEccCCCCCC
Q 006938 286 -RVAYHVCIGNHEYD 299 (625)
Q Consensus 286 -~iP~~~v~GNHD~~ 299 (625)
.+|+++++||||..
T Consensus 94 ~~~pv~~v~GNHD~~ 108 (386)
T 3av0_A 94 NNIKVYIVAGNHEMP 108 (386)
T ss_dssp TTCEEEECCCGGGSC
T ss_pred cCCcEEEEcCCCCCC
Confidence 58999999999985
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.17 E-value=7.9e-10 Score=105.30 Aligned_cols=94 Identities=18% Similarity=0.270 Sum_probs=64.0
Q ss_pred eEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEE
Q 006938 394 FVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVI 473 (625)
Q Consensus 394 wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~ 473 (625)
.+|++.|.|++.... + .+.+.+++.+++++++++||+|...... .+++.++..
T Consensus 78 ~~i~~~Hg~~~~~~~---~-------~~~l~~~~~~~~~d~vi~GHtH~~~~~~-----------------~~~~~~inp 130 (176)
T 3ck2_A 78 TKIIQTHGHLFDINF---N-------FQKLDYWAQEEEAAICLYGHLHVPSAWL-----------------EGKILFLNP 130 (176)
T ss_dssp EEEEEECSGGGTTTT---C-------SHHHHHHHHHTTCSEEECCSSCCEEEEE-----------------ETTEEEEEE
T ss_pred eEEEEECCCccCCCC---C-------HHHHHHHHHhcCCCEEEECCcCCCCcEE-----------------ECCEEEEEC
Confidence 367888888765321 1 1345667788999999999999865432 145677777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEeCCEEEEEEEECCCCcEEEEEE
Q 006938 474 GMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVE 538 (625)
Q Consensus 474 G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v~D~f~ 538 (625)
|+.|..... ....+|.+++++++.++++++. -+|+++.+++
T Consensus 131 Gs~~~~~~~-----------------------~~~~~y~il~~~~~~~~v~~~~-~~~~~~~~~~ 171 (176)
T 3ck2_A 131 GSISQPRGT-----------------------IRECLYARVEIDDSYFKVDFLT-RDHEVYPGLS 171 (176)
T ss_dssp CCSSSCCTT-----------------------CCSCCEEEEEECSSEEEEEEEC-TTSCBCTTCC
T ss_pred CCCCcCCCC-----------------------CCCCeEEEEEEcCCEEEEEEEE-ECCEEcchhh
Confidence 776643110 0125899999999999999995 5677766443
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.15 E-value=1.9e-10 Score=115.52 Aligned_cols=216 Identities=9% Similarity=-0.032 Sum_probs=113.2
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHH---HhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCc
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIE---ALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVA 288 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~---~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP 288 (625)
.+++++||.|.. ...++.+++.++ ....++|+|+++||++..+.... +..+.+..+....|
T Consensus 2 m~i~~isD~H~~-------------~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~---~~~~~l~~l~~~~~ 65 (252)
T 1nnw_A 2 VYVAVLANIAGN-------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPK---EVIEVIKDLTKKEN 65 (252)
T ss_dssp CEEEEEECCTTC-------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHH---HHHHHHHHHHHHSC
T ss_pred cEEEEEeecCCC-------------HHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHH---HHHHHHHhhHhhcC
Confidence 368999999864 123455666555 32227899999999987553322 23334444433468
Q ss_pred eEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc
Q 006938 289 YHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET 368 (625)
Q Consensus 289 ~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~ 368 (625)
+++++||||..... +... +. .+..... +++.......+. ..
T Consensus 66 ~~~v~GNhD~~~~~-----------~~~~----~~-~~~~~~~----------------------~~~~~~~~~~~~-~~ 106 (252)
T 1nnw_A 66 VKIIRGKYDQIIAM-----------SDPH----AT-DPGYIDK----------------------LELPGHVKKALK-FT 106 (252)
T ss_dssp EEEECCHHHHHHHH-----------SCTT----CS-SSGGGGG----------------------SSCCHHHHHHHH-HH
T ss_pred eeEEecchHHHhhc-----------cccc----cC-Ccccccc----------------------hhhhHHHHHHHH-HH
Confidence 99999999974110 0000 00 0000000 000000000000 00
Q ss_pred ccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCC-CCChhhhHHHHHHHHHHHHHc-CceEEEEcCccCceee
Q 006938 369 NFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNE-NRDAPLRNRMLEHLEPLFVEN-NVTLALWGHVHRYERF 446 (625)
Q Consensus 369 ~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~-~~d~~~~~~~~~~l~~l~~ky-~VdlvlsGH~H~yeR~ 446 (625)
......+|++||++........-....|++.|++++..... .... . ..+.+..++.++ +++++++||+|.....
T Consensus 107 ~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~-~---~~~~l~~~~~~~~~~~~vi~GHtH~~~~~ 182 (252)
T 1nnw_A 107 WEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAE-Q---PTSYYEAIMRPVKDYEMLIVASPMYPVDA 182 (252)
T ss_dssp HHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSS-C---CHHHHHHHHGGGTTSSEEEESTTCSEEEE
T ss_pred HHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCC-C---CHHHHHHHHhcCCCCCEEEECCccccceE
Confidence 00123578899876332221110123677788777432211 1110 0 124567778888 9999999999986543
Q ss_pred eccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEeCCEEEEEEE
Q 006938 447 CPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYV 526 (625)
Q Consensus 447 ~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i 526 (625)
. .+++++|..|+.|..... ....+|.++++++..+++..+
T Consensus 183 ~-----------------~~~~~~in~Gs~~~~~~~-----------------------~~~~~y~il~~~~~~v~~~~v 222 (252)
T 1nnw_A 183 M-----------------TRYGRVVCPGSVGFPPGK-----------------------EHKATFALVDVDTLKPKFIEV 222 (252)
T ss_dssp E-----------------ETTEEEEEECCSSSCSSS-----------------------SCCEEEEEEETTTCCEEEEEE
T ss_pred e-----------------cCCeEEEECCCccCCCCC-----------------------CCcceEEEEECCCCeEEEEEe
Confidence 2 145677888877653210 012478888877766665554
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.13 E-value=3.1e-09 Score=102.69 Aligned_cols=101 Identities=16% Similarity=0.139 Sum_probs=64.0
Q ss_pred eEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEE
Q 006938 394 FVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVI 473 (625)
Q Consensus 394 wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~ 473 (625)
+.|++.|.+++.... + .+.+..++.+.++|++++||+|...... .+++.++..
T Consensus 90 ~~i~l~Hg~~~~~~~---~-------~~~l~~~~~~~~~d~vi~GHtH~~~~~~-----------------~~~~~~inp 142 (192)
T 1z2w_A 90 FKIGLIHGHQVIPWG---D-------MASLALLQRQFDVDILISGHTHKFEAFE-----------------HENKFYINP 142 (192)
T ss_dssp EEEEEECSCCCCBTT---C-------HHHHHHHHHHHSSSEEECCSSCCCEEEE-----------------ETTEEEEEC
T ss_pred EEEEEECCCcCCCCC---C-------HHHHHHHHHhcCCCEEEECCcCcCccEe-----------------ECCEEEEEC
Confidence 467777754443211 1 1345567777899999999999865331 145667777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEeCCEEEEEEEECCCCcE-EEEEEEEe
Q 006938 474 GMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEV-HDMVEILA 541 (625)
Q Consensus 474 G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v-~D~f~I~k 541 (625)
|+.+....+. . .....+|.+++++++.++++++.-.++++ +.++++.|
T Consensus 143 GS~~~~~~~~----~----------------~~~~~~y~il~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 191 (192)
T 1z2w_A 143 GSATGAYNAL----E----------------TNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 191 (192)
T ss_dssp CCTTCCCCSS----C----------------SCCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CcccccCCCC----C----------------cCCCCcEEEEEEECCEEEEEEEEccCCEEEEEEEEEcc
Confidence 7665432110 0 01345899999999999999987555553 66666654
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.12 E-value=1.2e-09 Score=107.54 Aligned_cols=101 Identities=17% Similarity=0.174 Sum_probs=64.0
Q ss_pred eEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEE
Q 006938 394 FVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVI 473 (625)
Q Consensus 394 wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~ 473 (625)
++|++.|.+++.... + .+.+..++.+.++|++++||+|...... .+++.++..
T Consensus 114 ~~i~l~Hg~~~~~~~---~-------~~~l~~~~~~~~~d~vl~GHtH~~~~~~-----------------~~~~~~inp 166 (215)
T 2a22_A 114 FKIGLMHGNQVLPWD---D-------PGSLEQWQRRLDCDILVTGHTHKLRVFE-----------------KNGKLFLNP 166 (215)
T ss_dssp EEEEEECSTTSSSTT---C-------HHHHHHHHHHHTCSEEEECSSCCCEEEE-----------------ETTEEEEEC
T ss_pred eEEEEEcCCccCCCC---C-------HHHHHHHHhhcCCCEEEECCcCCCccEe-----------------eCCEEEEEC
Confidence 367778855443211 1 1345567777899999999999865321 145667777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEeCCEEEEEEEECCCCcE-EEEEEEEe
Q 006938 474 GMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEV-HDMVEILA 541 (625)
Q Consensus 474 G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v-~D~f~I~k 541 (625)
|+.+....+. . .....+|.+++++++.++++++.-.++++ +.++.+.|
T Consensus 167 GS~~~~~~~~----~----------------~~~~~~y~il~i~~~~i~~~~~~~~~~~~~v~~~~~~~ 215 (215)
T 2a22_A 167 GTATGAFSAL----T----------------PDAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSEFSK 215 (215)
T ss_dssp CCSSCCCCTT----S----------------TTCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CcccccCCCC----C----------------CCCCCcEEEEEEeCCcEEEEEEEecCCeEEEEEEEeeC
Confidence 7765532210 0 01235899999999999999887556663 56655543
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.01 E-value=3.2e-09 Score=113.64 Aligned_cols=200 Identities=12% Similarity=0.175 Sum_probs=104.6
Q ss_pred ceEEEEEecCCCCC----CCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccc-cCCC-chhhHHHHHHhHHHhhc
Q 006938 212 TIAFLFGDMGAATP----YTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDIS-YARG-YSWLWDEFFALIEPVAS 285 (625)
Q Consensus 212 ~~f~v~GD~g~~~~----~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDiv-y~~g-~~~~wd~f~~~l~~~~~ 285 (625)
.+|+.++|+|.+.. .....+ .......++++++.+.+ .+||+||++||++ +... ....++.+.+.+..+..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~-~~~~~~~l~~l~~~~~~--~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~ 77 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDR-REELKKALDKVVEEAEK--REVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR 77 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEEC-HHHHHHHHHHHHHHHHH--HTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcCh-hHHHHHHHHHHHHHHHh--cCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHh
Confidence 37899999998754 211111 11233456666665544 4899999999998 4332 23344555555555543
Q ss_pred CCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEE--eC-cEEEE
Q 006938 286 RVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFD--MG-VVHFV 362 (625)
Q Consensus 286 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd--~G-~v~fI 362 (625)
.+|+++++||||..... .++ .+. ..++.+. +.. ....-+.+. .| .+.|+
T Consensus 78 ~~~v~~i~GNHD~~~~~----------~~~---------~~~--~~~~~~~----~~~---~~~~~v~l~~~~G~~v~i~ 129 (379)
T 3tho_B 78 TAPVVVLPGNQDWKGLK----------LFG---------NFV--TSISSDI----TFV---MSFEPVDVEAKRGQKVRIL 129 (379)
T ss_dssp HSCEEECCCTTSCTTHH----------HHH---------HHH--HTTCSSE----EEC---CSSCCEEEECTTCCEEEEE
T ss_pred CCCEEEEcCCCccccCc----------ccc---------ccc--cccCCcc----eee---cccceEEEEcCCCCEEEEE
Confidence 39999999999963100 000 000 0011110 000 000012222 23 47777
Q ss_pred EEeCCcccC----CChHHHHHHHHHhhcc---ccCCCCeEEEEcccCCccCCC-CCCChhhhHHHHHHHHHHHHHcCceE
Q 006938 363 YISTETNFL----QGSNQYNFIKHDLESV---DRKKTPFVVVQGHRPMYTTSN-ENRDAPLRNRMLEHLEPLFVENNVTL 434 (625)
Q Consensus 363 ~LDT~~~~~----~~~~Q~~WL~~~L~~~---~r~~~~wiIV~~H~P~y~~~~-~~~d~~~~~~~~~~l~~l~~ky~Vdl 434 (625)
.+.-..... .+.++.+|+.+.|+.. ......+.|+++|.++..... ........ ..+...+...++|+
T Consensus 130 glp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se~~~~----~~v~~~~~~~~~dy 205 (379)
T 3tho_B 130 PFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQGRE----IIINRALIPSVVDY 205 (379)
T ss_dssp EECCCCCC----CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC-------CS----CCBCGGGSCTTSSE
T ss_pred ECCCCCHHHHhhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCCCCccccc----cccCHHHcCcCCCE
Confidence 775321110 1356789999988721 112345689999998754322 11110000 11111222358999
Q ss_pred EEEcCccCceee
Q 006938 435 ALWGHVHRYERF 446 (625)
Q Consensus 435 vlsGH~H~yeR~ 446 (625)
++.||.|..+..
T Consensus 206 valGH~H~~q~~ 217 (379)
T 3tho_B 206 AALGHIHSFREI 217 (379)
T ss_dssp EEEESCSSCEEE
T ss_pred EEcccccCCeEe
Confidence 999999998654
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=3.6e-09 Score=108.98 Aligned_cols=218 Identities=12% Similarity=0.022 Sum_probs=109.3
Q ss_pred CCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcC
Q 006938 207 EDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASR 286 (625)
Q Consensus 207 ~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~ 286 (625)
...+..+|++++|+|..... + + -.++|+||++||+++.+. ..+.+.+.+.++.+ ..
T Consensus 55 ~~~~~mri~~iSD~H~~~~~----------------l-----~-i~~~D~vi~aGDl~~~g~-~~e~~~~~~~L~~l-~~ 110 (296)
T 3rl5_A 55 KPAGHTRFVCISDTRSRTDG----------------I-----Q-MPYGDILLHTGDFTELGL-PSEVKKFNDWLGNL-PY 110 (296)
T ss_dssp CCTTEEEEEEEBCCTTCCTT----------------C-----C-CCSCSEEEECSCCSSSCC-HHHHHHHHHHHHTS-CC
T ss_pred CCCCCeEEEEEeeCCCCcch----------------h-----c-cCCCCEEEECCcccCCCC-HHHHHHHHHHHHhC-CC
Confidence 33455899999999986421 0 1 157899999999987543 34445555555443 23
Q ss_pred CceEEccCCCCCCCCCCCCCCCCCCCccCCCC---CCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEE
Q 006938 287 VAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDG---GGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVY 363 (625)
Q Consensus 287 iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~---gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~ 363 (625)
.|+++++||||+..... +........|.... .... ..+...-.++. |... ... -+..+++++|+.
T Consensus 111 ~~v~~V~GNHD~~~d~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~------~~~~--L~~--~~~~i~Gl~i~G 178 (296)
T 3rl5_A 111 EYKIVIAGNHELTFDKE-FMADLVKQDYYRFPSVSKLKP-EDFDNVQSLLT------NSIY--LQD--SEVTVKGFRIYG 178 (296)
T ss_dssp SEEEECCCTTCGGGCHH-HHHHHTTSCGGGSHHHHTCCH-HHHTTTGGGCT------TSEE--CSS--EEEEETTEEEEE
T ss_pred CeEEEEcCCcccccchh-hhhhhhccccccccccccccc-chhhhHhhhcC------CeEE--ecC--CcEEECCEEEEE
Confidence 56899999999853210 00000000000000 0000 00000000010 1000 000 135677899888
Q ss_pred EeCCcccCC---ChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCC--CChhhhHHHHHHHHHHH-HHcCceEEEE
Q 006938 364 ISTETNFLQ---GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNEN--RDAPLRNRMLEHLEPLF-VENNVTLALW 437 (625)
Q Consensus 364 LDT~~~~~~---~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~--~d~~~~~~~~~~l~~l~-~ky~Vdlvls 437 (625)
..-...+.. ..++.+++.+.+.... .+. .|++.|.|++...... ...... .+.|...+ ++++++++++
T Consensus 179 sp~tP~~~~~~f~~~~~~~~~~~~~~ip-~~~--dILvTH~PP~g~~D~~~~~~~~~G---~~~L~~~i~~~~~p~l~v~ 252 (296)
T 3rl5_A 179 APWTPWFNGWGFNLPRGQSLLDKWNLIP-EGT--DILMTHGPPLGFRDWVPKELQRVG---CVELLNTVQRRVRPKLHVF 252 (296)
T ss_dssp ECCBCC--CCTTBCCTTHHHHHHHTTSC-TTC--SEEEESSCBTTSSCEEGGGTEECS---BHHHHHHHHHTTCCSEEEE
T ss_pred ecCCCCCCCcCCCcchHHHHHHHHhhCC-CCC--eEEEECCCccccccccccccCcCC---hHHHHHHHHHhcCCCEEEE
Confidence 542211111 1122234444444332 233 6888999998753211 000000 13445555 6889999999
Q ss_pred cCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCC
Q 006938 438 GHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQP 482 (625)
Q Consensus 438 GH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~ 482 (625)
||+|....... .+++++|..|+.|..+++
T Consensus 253 GH~H~~~~~~~----------------~g~t~vvNpGs~~~~~~~ 281 (296)
T 3rl5_A 253 GGIHEGYGTMT----------------DGYTTYINASTCTVSFQP 281 (296)
T ss_dssp CSCGGGCEEEE----------------CSSCEEEECBCSCTTSCC
T ss_pred CCccCCCceEE----------------ECCEEEEECCcCCcCcCC
Confidence 99997532211 256778888888776554
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1.3e-08 Score=103.78 Aligned_cols=220 Identities=14% Similarity=0.059 Sum_probs=118.2
Q ss_pred CCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCC
Q 006938 208 DSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV 287 (625)
Q Consensus 208 ~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~i 287 (625)
..+++++++++|.+.. ...++.+++.++. .++|.|+++||++..+... .+..+.++. ..
T Consensus 8 ~~~~~~i~~iSDiHg~-------------~~~l~~vl~~~~~--~~~D~ii~~GDlv~~g~~~---~~~~~~l~~---~~ 66 (270)
T 3qfm_A 8 HMDMTKIALLSDIHGN-------------TTALEAVLADARQ--LGVDEYWLLGDILMPGTGR---RRILDLLDQ---LP 66 (270)
T ss_dssp ---CEEEEEECCCTTC-------------HHHHHHHHHHHHH--TTCCEEEECSCCSSSSSCS---HHHHHHHHT---SC
T ss_pred cccccEEEEEecCCCC-------------HHHHHHHHHHHHh--cCCCEEEEcCCCCCCCCCH---HHHHHHHHc---cC
Confidence 3467899999999864 2345667777664 4799999999999755422 223333332 24
Q ss_pred ceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCC
Q 006938 288 AYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTE 367 (625)
Q Consensus 288 P~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~ 367 (625)
|++++.||||..... .. . +.+ .|..|. ..+.+ . .+. .
T Consensus 67 ~~~~v~GNhD~~~~~-----------~~-~--~~~------~~~~~~--------------~~~~~----~----~~~-~ 103 (270)
T 3qfm_A 67 ITARVLGNWEDSLWH-----------GV-R--KEL------DSTRPS--------------QRYLL----R----QCQ-Y 103 (270)
T ss_dssp EEEECCCHHHHHHHH-----------HH-T--TCS------CTTSHH--------------HHHHH----H----HHH-H
T ss_pred CEEEEcCChHHHHHH-----------hh-c--ccc------CCCcHH--------------HHHHH----H----HHH-H
Confidence 789999999974100 00 0 000 000000 00000 0 000 0
Q ss_pred cccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeee
Q 006938 368 TNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFC 447 (625)
Q Consensus 368 ~~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~ 447 (625)
.......+|++||++.-......-....|++.|..+.......-.. ....+.+..++.+.++|++|+||+|......
T Consensus 104 ~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~~~~~~~~~---~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~ 180 (270)
T 3qfm_A 104 VLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDKNWGRELIH---TGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY 180 (270)
T ss_dssp HHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTBSSSSTTST---TCCHHHHHHTTTTTTCSEEECCSSCSEEEEE
T ss_pred HHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCCCCCCceecC---CCcHHHHHHHhcccCCCEEEECCcCchHhee
Confidence 0112357899999864332211111235667776554321111000 0113456677777899999999999643321
Q ss_pred ccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEeCCE-EEEEEE
Q 006938 448 PLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEK-LTLSYV 526 (625)
Q Consensus 448 p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~~-L~~~~i 526 (625)
. .++..+|..|+.|.+.... +.+. .+....|.+++++++. ++++++
T Consensus 181 -~---------------~~~~~~iNpGSvg~pr~~~-------------~~~~----~~~~asyaild~~~~~~~~v~~~ 227 (270)
T 3qfm_A 181 -G---------------TGGQLIVNPGSIGQPFFLD-------------AQLR----KDLRAQYMILEFDDKGLVDMDFR 227 (270)
T ss_dssp -C---------------TTSCEEEEECCSSSCCCSS-------------TTGG----GCCCEEEEEEEEETTEEEEEEEE
T ss_pred -c---------------cCCEEEEECCCccCCCCCC-------------cccc----CCCCCEEEEEEecCCCceEEEEE
Confidence 0 1567889999988753211 0000 0123579999998775 577776
Q ss_pred E
Q 006938 527 G 527 (625)
Q Consensus 527 ~ 527 (625)
+
T Consensus 228 r 228 (270)
T 3qfm_A 228 R 228 (270)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.92 E-value=1.1e-08 Score=99.01 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=44.4
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
.++++++|++.. ...++.+++.+++ .++|+|+++||++.. ..++.++.+ ..|+++
T Consensus 26 m~i~~iSD~Hg~-------------~~~l~~~l~~~~~--~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~ 80 (190)
T 1s3l_A 26 MKIGIMSDTHDH-------------LPNIRKAIEIFND--ENVETVIHCGDFVSL--------FVIKEFENL--NANIIA 80 (190)
T ss_dssp CEEEEECCCTTC-------------HHHHHHHHHHHHH--SCCSEEEECSCCCST--------HHHHHGGGC--SSEEEE
T ss_pred eEEEEEeeCCCC-------------HHHHHHHHHHHhh--cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEE
Confidence 789999999842 2345556655543 589999999999742 233333322 579999
Q ss_pred ccCCCCCC
Q 006938 292 CIGNHEYD 299 (625)
Q Consensus 292 v~GNHD~~ 299 (625)
++||||..
T Consensus 81 V~GNhD~~ 88 (190)
T 1s3l_A 81 TYGNNDGE 88 (190)
T ss_dssp ECCTTCCC
T ss_pred EeCCCcch
Confidence 99999974
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=98.92 E-value=5.7e-09 Score=104.74 Aligned_cols=212 Identities=14% Similarity=0.090 Sum_probs=110.6
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceE
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYH 290 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~ 290 (625)
..+++++||.|.. ...++.+++.+ . ++|.++++||++..+.... +..+.+..+ .+++
T Consensus 3 ~mri~~isDiHg~-------------~~~l~~~l~~~---~-~~d~ii~~GDl~~~g~~~~---~~~~~l~~~---~~~~ 59 (246)
T 3rqz_A 3 AMRILIISDVHAN-------------LVALEAVLSDA---G-RVDDIWSLGDIVGYGPRPR---ECVELVRVL---APNI 59 (246)
T ss_dssp CCCEEEECCCTTC-------------HHHHHHHHHHH---C-SCSEEEECSCCSSSSSCHH---HHHHHHHHH---CSSE
T ss_pred CcEEEEEeecCCC-------------HHHHHHHHHhc---c-CCCEEEECCCcCCCCCCHH---HHHHHHHhc---CCCE
Confidence 4689999999853 22344455443 3 8999999999997554322 223333332 2368
Q ss_pred EccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCccc
Q 006938 291 VCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNF 370 (625)
Q Consensus 291 ~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~ 370 (625)
.+.||||...... +. . ..+. .. .. ....| ...
T Consensus 60 ~v~GNhD~~~~~~----------~~----------~-~~~~--~~-----~~----~~~~~----------------~~~ 91 (246)
T 3rqz_A 60 SVIGNHDWACIGR----------LS----------L-DEFN--PV-----AR----FASYW----------------TTM 91 (246)
T ss_dssp ECCCHHHHHHTCC----------CC----------C-C--C--GG-----GG----CHHHH----------------HHH
T ss_pred EEeCchHHHHhcc----------CC----------c-cccC--HH-----HH----HHHHH----------------HHH
Confidence 9999999742100 00 0 0000 00 00 00000 001
Q ss_pred CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceeeeccC
Q 006938 371 LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLN 450 (625)
Q Consensus 371 ~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~ 450 (625)
....++++||++...... .. .|++.|.++.......... ...+..+|.+++++++|+||+|.........
T Consensus 92 ~l~~~~~~~L~~lp~~~~-~~---~i~~~Hg~p~~~~~~~~~~------~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~ 161 (246)
T 3rqz_A 92 QLQAEHLQYLESLPNRMI-DG---DWTVVHGSPRHPIWEYIYN------ARIAALNFPAFDTPLCFVGHTHVPLYIREDE 161 (246)
T ss_dssp HCCHHHHHHHHHCCSEEE-ET---TEEEESSCSSSTTTCCCCS------HHHHHHHGGGCCSSEEECCSSSSEEEEEHHH
T ss_pred HcCHHHHHHHHhCCcEEE-EC---CEEEEECCcCCccccccCC------hHHHHHHHhccCCCEEEECCcCcccEEEecc
Confidence 235789999986433322 11 4666777765532111111 2456678889999999999999743222100
Q ss_pred Ccccc--CCC-CCCCC-CCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEeCCEEEEEEE
Q 006938 451 NFTCG--SMG-MDGEP-SEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYV 526 (625)
Q Consensus 451 ~~~~~--~~~-~~~~~-~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i 526 (625)
+..+. ... ....+ -..+...|..|+-|.+... ....+|.+++.+...+++..+
T Consensus 162 ~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~Prdg-----------------------~p~A~Y~i~d~~~~~v~~~rv 218 (246)
T 3rqz_A 162 ALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQPRDG-----------------------DPRASYAIFEPDAQRVTFHRV 218 (246)
T ss_dssp HHTTCCCBCCCTTCEEECSSSCEEEEECCSSCCCSS-----------------------CCSEEEEEEEGGGTEEEEEEE
T ss_pred cccccccccccccceeecCCCeEEEECCccCCCCCc-----------------------CCcceEEEEECCCCEEEEEEe
Confidence 00000 000 00000 0134677788888875210 122379999887776666655
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.3e-06 Score=94.52 Aligned_cols=89 Identities=16% Similarity=0.131 Sum_probs=59.9
Q ss_pred CCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCc-hhhHHHHHHhHHHh---
Q 006938 208 DSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY-SWLWDEFFALIEPV--- 283 (625)
Q Consensus 208 ~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~-~~~wd~f~~~l~~~--- 283 (625)
..+.++|+.++|+|.+....... ........++++++.+.+ .+||+||++||++..... ......+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~-~~~d~~~~l~~ll~~~~~--~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~ 105 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAV-RGNDTFVTLDEILRLAQE--NEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMG 105 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTT-TTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBC
T ss_pred CCCCEEEEEEeccCCCCcccccc-hhhhHHHHHHHHHHHHhh--cCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhcc
Confidence 34568999999999875432111 122344567777777665 689999999999876543 33444455555432
Q ss_pred -------------------------------hcCCceEEccCCCCCC
Q 006938 284 -------------------------------ASRVAYHVCIGNHEYD 299 (625)
Q Consensus 284 -------------------------------~~~iP~~~v~GNHD~~ 299 (625)
...+|++++.||||..
T Consensus 106 ~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 106 DRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp SSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred CCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 2479999999999975
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.70 E-value=3.7e-08 Score=95.13 Aligned_cols=82 Identities=13% Similarity=0.197 Sum_probs=47.9
Q ss_pred ceEEEEEecCCCCCCC-cccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceE
Q 006938 212 TIAFLFGDMGAATPYT-TFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYH 290 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~-~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~ 290 (625)
.++++++|+|.+.... .. +.-....+..+.+++.+++...++|+|+++||+++.+. .+....+.++.+ ..|++
T Consensus 2 ~~i~~iSD~H~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~---~~~~~~~~l~~l--~~~~~ 75 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINL-NPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFN---DKNEYLRIWKAL--PGRKI 75 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHH-STTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSC---CTTSHHHHHHHS--SSEEE
T ss_pred cEEEEEeccccCCCccccc-cCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCch---hHHHHHHHHHHC--CCCEE
Confidence 4689999999763210 00 00000112344555555543368999999999987531 122233334333 35899
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
+++||||..
T Consensus 76 ~v~GNhD~~ 84 (195)
T 1xm7_A 76 LVMGNHDKD 84 (195)
T ss_dssp EECCTTCCC
T ss_pred EEeCCCCCc
Confidence 999999974
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.69 E-value=2.4e-07 Score=88.54 Aligned_cols=64 Identities=16% Similarity=0.121 Sum_probs=40.7
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
.++++++|++...... .+..+++++ ..++|+|+++||++.. +.++.++.+ ..|+++
T Consensus 23 mri~~iSD~Hg~~~~~-----------~l~~~l~~~---~~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~ 78 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMA-----------SLPDEILNS---LKEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYG 78 (178)
T ss_dssp EEEEEECCCCBTTTTC-----------CCCHHHHHG---GGGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEE
T ss_pred eEEEEEecccCCCCHH-----------HHHHHHHHH---hcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEE
Confidence 5899999999421111 011223322 2579999999999751 233344333 369999
Q ss_pred ccCCCCCC
Q 006938 292 CIGNHEYD 299 (625)
Q Consensus 292 v~GNHD~~ 299 (625)
++||||..
T Consensus 79 V~GNhD~~ 86 (178)
T 2kkn_A 79 VHGNMDYP 86 (178)
T ss_dssp CCCSSSCG
T ss_pred EECCCCcH
Confidence 99999973
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.66 E-value=7.6e-07 Score=93.27 Aligned_cols=86 Identities=14% Similarity=0.084 Sum_probs=54.8
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCc-hhhHHHHHHhHHHhh-cCCce
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY-SWLWDEFFALIEPVA-SRVAY 289 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~-~~~wd~f~~~l~~~~-~~iP~ 289 (625)
.+|+.++|+|.+................++.+++.+.+ .+||+||++||+++.... ...+..+.+.++.+. ..+|+
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v 78 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQ--ENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPV 78 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHH--TTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHh--cCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcE
Confidence 37899999998742100000011122445566665543 589999999999875422 234555566666664 36999
Q ss_pred EEccCCCCCC
Q 006938 290 HVCIGNHEYD 299 (625)
Q Consensus 290 ~~v~GNHD~~ 299 (625)
++++||||..
T Consensus 79 ~~v~GNHD~~ 88 (333)
T 1ii7_A 79 FAIEGNHDRT 88 (333)
T ss_dssp EEECCTTTCC
T ss_pred EEeCCcCCCc
Confidence 9999999985
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.60 E-value=2.7e-06 Score=91.63 Aligned_cols=88 Identities=14% Similarity=0.038 Sum_probs=57.4
Q ss_pred CCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch-hhHHHHHHhHHH-----
Q 006938 209 SNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS-WLWDEFFALIEP----- 282 (625)
Q Consensus 209 ~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~-~~wd~f~~~l~~----- 282 (625)
.+.++|+.++|+|.+....... ........++.+++.+.+ .+||+||++||++...... .....+++.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~-~~~d~~~~l~~lv~~~~~--~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~ 87 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPV-RGNDSFVSFNEILEIARE--RDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 87 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT-TTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEEcCCCCCcccccc-cchhHHHHHHHHHHHHHh--cCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 3568999999999875422111 112344567777777665 5899999999998765432 223334444333
Q ss_pred -------h----------------------hcCCceEEccCCCCCC
Q 006938 283 -------V----------------------ASRVAYHVCIGNHEYD 299 (625)
Q Consensus 283 -------~----------------------~~~iP~~~v~GNHD~~ 299 (625)
+ ...+|++++.||||..
T Consensus 88 ~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~ 133 (417)
T 4fbw_A 88 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 133 (417)
T ss_dssp CCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-
T ss_pred CcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCc
Confidence 1 1379999999999985
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=3.9e-06 Score=91.25 Aligned_cols=90 Identities=13% Similarity=0.036 Sum_probs=58.9
Q ss_pred CCCCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCch-hhHHHHHHhHHH---
Q 006938 207 EDSNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS-WLWDEFFALIEP--- 282 (625)
Q Consensus 207 ~~~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~-~~wd~f~~~l~~--- 282 (625)
...+.++|+.++|+|.+....... ........++++++.+.+ .+||+||++||++...... .....+++.++.
T Consensus 72 ~~~~~mrilhiSDlHLG~~~~~~~-~~~d~~~~l~~lv~~~~~--~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~ 148 (472)
T 4fbk_A 72 GSENTIRILISSDPHVGYGEKDPV-RGNDSFVSFNEILEIARE--RDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCL 148 (472)
T ss_dssp -CTTCEEEEEECCCCBTTTTTCTT-TTTHHHHHHHHHHHHHHH--TTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHB
T ss_pred CCCCCeEEEEEecccCCCcccCcc-cchhHHHHHHHHHHHHHh--cCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcc
Confidence 334568999999999875432111 112344567778877765 5899999999998765432 223334444432
Q ss_pred ---------h----------------------hcCCceEEccCCCCCC
Q 006938 283 ---------V----------------------ASRVAYHVCIGNHEYD 299 (625)
Q Consensus 283 ---------~----------------------~~~iP~~~v~GNHD~~ 299 (625)
+ ...+|++++.||||..
T Consensus 149 g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 149 GDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp SSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred cCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 2379999999999985
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.47 E-value=6.3e-06 Score=80.49 Aligned_cols=71 Identities=10% Similarity=0.090 Sum_probs=47.0
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCc---hhh--HHHHHHhHHHhhcC
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY---SWL--WDEFFALIEPVASR 286 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~---~~~--wd~f~~~l~~~~~~ 286 (625)
.++++++|.+.. ...++.+++.+++ .++|+|+++||+++.+.. ... -.+..+.++.+ .
T Consensus 26 mki~~iSD~H~~-------------~~~l~~~l~~~~~--~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~--~ 88 (208)
T 1su1_A 26 MKLMFASDIHGS-------------LPATERVLELFAQ--SGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--A 88 (208)
T ss_dssp CEEEEECCCTTB-------------HHHHHHHHHHHHH--HTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--G
T ss_pred EEEEEEEcCCCC-------------HHHHHHHHHHHHh--cCCCEEEECCCccccCcccccccccCHHHHHHHHHhc--C
Confidence 689999999864 2345556665544 378999999999865431 111 13334444433 2
Q ss_pred CceEEccCCCCCC
Q 006938 287 VAYHVCIGNHEYD 299 (625)
Q Consensus 287 iP~~~v~GNHD~~ 299 (625)
.|+++++||||..
T Consensus 89 ~~v~~V~GNHD~~ 101 (208)
T 1su1_A 89 HKVIAVRGNCDSE 101 (208)
T ss_dssp GGEEECCCTTCCH
T ss_pred CceEEEECCCchH
Confidence 5899999999974
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.03 E-value=2.8e-05 Score=87.04 Aligned_cols=86 Identities=13% Similarity=0.018 Sum_probs=46.7
Q ss_pred CcceEEEEEecCCCCCCCccccc--c--hhhHHHHHHHHHHHHHhCCCCc-EEEEcCccccCCCchh--hHHHHHHhHHH
Q 006938 210 NETIAFLFGDMGAATPYTTFERT--Q--DESISTMKWILRDIEALGDKPA-FVSHIGDISYARGYSW--LWDEFFALIEP 282 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~--q--~~s~~tl~~i~~~i~~~~~~pd-fvl~~GDivy~~g~~~--~wd~f~~~l~~ 282 (625)
..++++.++|+|..-....+... . ......++.+++.+++. +|+ +++.+||++....... ......+.+.
T Consensus 28 ~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~--~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln- 104 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWAR--AKNPLFLDAGDVFQGTLYFNQYRGLADRYFMH- 104 (552)
T ss_dssp CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHH--SSSEEEEECSCCSSSSHHHHHHTTHHHHHHHH-
T ss_pred eeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhh--CCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHH-
Confidence 45889999999975321111100 0 01234556667766653 566 9999999986432111 1111222222
Q ss_pred hhcCCceEEccCCCCCCC
Q 006938 283 VASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 283 ~~~~iP~~~v~GNHD~~~ 300 (625)
.--+-++++||||++.
T Consensus 105 --~lg~d~~~lGNHEfd~ 120 (552)
T 2z1a_A 105 --RLRYRAMALGNHEFDL 120 (552)
T ss_dssp --HTTCCEEECCGGGGTT
T ss_pred --hcCCCccccccccccC
Confidence 2223467899999963
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=97.90 E-value=9.7e-05 Score=82.23 Aligned_cols=85 Identities=13% Similarity=0.170 Sum_probs=44.9
Q ss_pred CcceEEEEEecCCCCCCCcccc---cchhhHHHHHHHHHHHHHhCCCCc-EEEEcCccccCCCchhh-------HHHHHH
Q 006938 210 NETIAFLFGDMGAATPYTTFER---TQDESISTMKWILRDIEALGDKPA-FVSHIGDISYARGYSWL-------WDEFFA 278 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~---~q~~s~~tl~~i~~~i~~~~~~pd-fvl~~GDivy~~g~~~~-------wd~f~~ 278 (625)
..++++.++|+|..-....+.. ........++.+++.+++ ..++ ++|.+||++........ .....+
T Consensus 18 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~--~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~ 95 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRR--QYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVD 95 (527)
T ss_dssp CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHT--TSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHH
T ss_pred CcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHh--cCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHH
Confidence 4689999999996532111111 011223445566666654 3555 78889999864311100 011122
Q ss_pred hHHHhhcCCceEEccCCCCCC
Q 006938 279 LIEPVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 279 ~l~~~~~~iP~~~v~GNHD~~ 299 (625)
.+.. .... ++++||||++
T Consensus 96 ~ln~--lg~D-~~t~GNHefd 113 (527)
T 3qfk_A 96 FYNR--MAFD-FGTLGNHEFN 113 (527)
T ss_dssp HHHH--TCCC-EECCCGGGGT
T ss_pred HHHh--cCCc-EEeccccccc
Confidence 2221 1333 5679999986
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=97.89 E-value=3.1e-05 Score=85.95 Aligned_cols=83 Identities=18% Similarity=0.122 Sum_probs=44.2
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhC--CCC-cEEEEcCccccCCCchh--hHHHHHHhHHHhhc
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALG--DKP-AFVSHIGDISYARGYSW--LWDEFFALIEPVAS 285 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~--~~p-dfvl~~GDivy~~g~~~--~wd~f~~~l~~~~~ 285 (625)
.++++.++|+|........ .......++.+++.+++.. .+| ++++.+||++....... ..+...+.+..+
T Consensus 8 ~l~Il~~~D~H~~~~~~~~---~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l-- 82 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNEY---GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV-- 82 (516)
T ss_dssp EEEEEEECCCTTCCSCCTT---SCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH--
T ss_pred EEEEEEecccccCccCCCC---CCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc--
Confidence 5789999999976321100 0011233445555554321 245 79999999974321110 112223333332
Q ss_pred CCceEEccCCCCCC
Q 006938 286 RVAYHVCIGNHEYD 299 (625)
Q Consensus 286 ~iP~~~v~GNHD~~ 299 (625)
. +-++++||||++
T Consensus 83 g-~d~~~~GNHEfd 95 (516)
T 1hp1_A 83 G-YDAMAIGNHEFD 95 (516)
T ss_dssp T-CCEEECCGGGGS
T ss_pred C-CCEEeecccccc
Confidence 2 346789999996
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=4.2e-05 Score=85.51 Aligned_cols=86 Identities=15% Similarity=0.149 Sum_probs=46.4
Q ss_pred cceEEEEEecCCCCCCCccccc-------chhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchh--hHHHHHHhHH
Q 006938 211 ETIAFLFGDMGAATPYTTFERT-------QDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSW--LWDEFFALIE 281 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~-------q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~--~wd~f~~~l~ 281 (625)
+++++.++|+|..-....+... .......++.+++.+++.. ..+++|.+||++....... ......+.+.
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~-~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ln 103 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAE-PNVLLLDAGDQYQGTIWFTVYKGAEVAHFMN 103 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHC-SSEEEEECSCCSSSSHHHHHHTTHHHHHHHH
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhC-CCEEEEECCccCCCchhhhhhCChHHHHHHH
Confidence 5789999999965321111000 0112345566677666542 2369999999986442111 1111222222
Q ss_pred HhhcCCceEEccCCCCCCC
Q 006938 282 PVASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 282 ~~~~~iP~~~v~GNHD~~~ 300 (625)
.+ ... ++++||||++.
T Consensus 104 ~l--g~d-~~~~GNHEfd~ 119 (546)
T 4h2g_A 104 AL--RYD-AMALGNHEFDN 119 (546)
T ss_dssp HH--TCS-EEECCGGGGTT
T ss_pred hc--CCc-EEeccCccccc
Confidence 22 333 56799999863
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00019 Score=79.43 Aligned_cols=85 Identities=18% Similarity=0.184 Sum_probs=44.9
Q ss_pred CcceEEEEEecCCCCCCCc--cc---ccchhhHHHHHHHHHHHHHhCCCCcEEEE-cCccccCCCchhhHHHHH---HhH
Q 006938 210 NETIAFLFGDMGAATPYTT--FE---RTQDESISTMKWILRDIEALGDKPAFVSH-IGDISYARGYSWLWDEFF---ALI 280 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~--~~---~~q~~s~~tl~~i~~~i~~~~~~pdfvl~-~GDivy~~g~~~~wd~f~---~~l 280 (625)
..++++.++|+|..-.... +. .........++.+++.+++. +|+.+++ +||++... .+..++ ..+
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~--~~~~llldaGD~~~g~----~~~~~~~g~~~~ 78 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAK--NKATWFFDAGDYFTGP----YISSLTKGKAII 78 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHH--CSSEEEEECSCCSSSS----HHHHTTTTHHHH
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhc--CCCeEEEECCCCCCCc----hhhhhcCChHHH
Confidence 3578999999986432110 00 00111244566677766653 5665555 99997632 111111 112
Q ss_pred HHhhcCCceEEccCCCCCCC
Q 006938 281 EPVASRVAYHVCIGNHEYDW 300 (625)
Q Consensus 281 ~~~~~~iP~~~v~GNHD~~~ 300 (625)
+.+..--+-++++||||++.
T Consensus 79 ~~ln~lg~D~~tlGNHEfd~ 98 (509)
T 3ive_A 79 DIMNTMPFDAVTIGNHEFDH 98 (509)
T ss_dssp HHHTTSCCSEECCCGGGGTT
T ss_pred HHHHhcCCcEEeeccccccc
Confidence 22222234466799999863
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00032 Score=78.66 Aligned_cols=57 Identities=18% Similarity=0.166 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHh--CCCCc-EEEEcCccccCCCchhhH---HHHHHhHHHhhcCCceEEccCCCCCC
Q 006938 238 STMKWILRDIEAL--GDKPA-FVSHIGDISYARGYSWLW---DEFFALIEPVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 238 ~tl~~i~~~i~~~--~~~pd-fvl~~GDivy~~g~~~~w---d~f~~~l~~~~~~iP~~~v~GNHD~~ 299 (625)
..++.+++.+++. +..|| +++.+||++.... ...+ +...+.+.. ...+++ + ||||++
T Consensus 105 arla~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~-~~~~~~g~~~~~~ln~--lg~d~~-~-GNHEfd 167 (562)
T 2wdc_A 105 GALTALIRDQKARVEAEGGKALVLDGGDTWTNSG-LSLLTRGEAVVRWQNL--VGVDHM-V-SHWEWT 167 (562)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSH-HHHHHTTHHHHHHHHH--HTCCEE-C-CSGGGG
T ss_pred HHHHHHHHHHHhhhhcCCCCEEEEeCCCCCCcch-hhhhhCCHHHHHHHHh--hCCcEE-e-cchhcc
Confidence 3455566666543 22388 9999999986432 1111 122233332 256665 6 999986
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0033 Score=62.91 Aligned_cols=170 Identities=18% Similarity=0.227 Sum_probs=85.8
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++||.=.. .....++.+++.+++ .. |+++..|..+..+.... ....+.+. ...+-.+ +
T Consensus 2 ~ilfiGDi~g~-----------~G~~~v~~~l~~lr~--~~-d~vi~ngen~~~G~g~~--~~~~~~l~--~~G~D~~-T 62 (252)
T 2z06_A 2 RVLFIGDVMAE-----------PGLRAVGLHLPDIRD--RY-DLVIANGENAARGKGLD--RRSYRLLR--EAGVDLV-S 62 (252)
T ss_dssp EEEEECCBCHH-----------HHHHHHHHHHHHHGG--GC-SEEEEECTTTTTTSSCC--HHHHHHHH--HHTCCEE-E
T ss_pred EEEEEEecCCc-----------ccHHHHHHHHHHHHh--hC-CEEEEeCCCccCCCCcC--HHHHHHHH--hCCCCEE-E
Confidence 67889996221 123445556666654 23 89888888765432111 12222222 2355565 6
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccccc--ccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEe--CCc
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKF--HMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYIS--TET 368 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f--~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LD--T~~ 368 (625)
.||||++... + .+|.... -.|.|-+ .+. | +..|.-++.++.++-+++ ...
T Consensus 63 ~GNHefD~~~----------l----------~~~l~~~~~vrpaN~~--~~~--p--g~~~~i~~~~G~kIgVi~l~g~~ 116 (252)
T 2z06_A 63 LGNHAWDHKE----------V----------YALLESEPVVRPLNYP--PGT--P--GKGFWRLEVGGESLLFVQVMGRI 116 (252)
T ss_dssp CCTTTTSCTT----------H----------HHHHHHSSEECCTTSC--SSC--S--SCSEEEEEETTEEEEEEEEECCT
T ss_pred eccEeeECch----------H----------HHHhccCCceEeecCC--CCC--C--CCCeEEEEECCEEEEEEEccccc
Confidence 7999997320 0 0111111 1122211 111 1 235677888886665554 322
Q ss_pred ccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 369 NFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 369 ~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
....-..-.+-+++.+++.. .+.+||.+|.-. . .+ .+.+. .+..-+||+++.||+|...
T Consensus 117 ~~~~~~~pf~~~~~~v~~lk---~d~IIv~~H~g~----------t-se--k~~la-~~~dg~Vd~VvGgHTHv~t 175 (252)
T 2z06_A 117 FMDPLDDPFRALDRLLEEEK---ADYVLVEVHAEA----------T-SE--KMALA-HYLDGRASAVLGTHTHVPT 175 (252)
T ss_dssp TSCCCCCHHHHHHHHHHHCC---CSEEEEEEECSC----------H-HH--HHHHH-HHHBTTBSEEEEESSCSCB
T ss_pred CccccCCHHHHHHHHHHHhC---CCEEEEEeCCCc----------H-HH--HHHHH-HhCCCCeEEEEcCCCCcCC
Confidence 11111222333555555543 677999999622 0 11 11222 2223469999999999843
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0003 Score=79.14 Aligned_cols=84 Identities=18% Similarity=0.104 Sum_probs=44.7
Q ss_pred cceEEEEEecCCCCCCCcc----cc----cchhhHHHHHHHHHHHHHhCCCC-cEEEEcCccccCCCchh--hHHHHHHh
Q 006938 211 ETIAFLFGDMGAATPYTTF----ER----TQDESISTMKWILRDIEALGDKP-AFVSHIGDISYARGYSW--LWDEFFAL 279 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~----~~----~q~~s~~tl~~i~~~i~~~~~~p-dfvl~~GDivy~~g~~~--~wd~f~~~ 279 (625)
+++++.++|+|..-....+ .. ........++.+++.+++. .+ .++|.+||++....... ......+.
T Consensus 12 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~--~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 89 (579)
T 3ztv_A 12 ELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKK--YKNPLVLHAGDAITGTLYFTLFGGSADAAV 89 (579)
T ss_dssp EEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHH--SSSEEEEECSCCSCSSHHHHTTTTHHHHHH
T ss_pred EEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhh--CCCEEEEeCCCCCCCceeeeecCCHHHHHH
Confidence 4789999999965321100 00 0011244566667766654 34 49999999986431110 11112222
Q ss_pred HHHhhcCCceEEccCCCCCC
Q 006938 280 IEPVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 280 l~~~~~~iP~~~v~GNHD~~ 299 (625)
+..+ .. -++++||||++
T Consensus 90 ln~l--g~-D~~tlGNHEfd 106 (579)
T 3ztv_A 90 MNAG--NF-HYFTLGNHEFD 106 (579)
T ss_dssp HHHH--TC-SEEECCSGGGT
T ss_pred HHhc--Cc-Ceeeccccccc
Confidence 2221 33 34679999986
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0034 Score=63.92 Aligned_cols=178 Identities=15% Similarity=0.133 Sum_probs=88.5
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC-CchhhHHHHHHhHHHhhcCCce
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR-GYSWLWDEFFALIEPVASRVAY 289 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~-g~~~~wd~f~~~l~~~~~~iP~ 289 (625)
..+++++||.... .....++..++.+++. .++|+++..||.+..+ +.. ....+.+. ...+-.
T Consensus 4 ~m~ilf~GDv~G~-----------~G~~~l~~~l~~lr~~-~~~d~vi~Ngen~~gG~g~~---~~~~~~ln--~~G~Da 66 (281)
T 1t71_A 4 SIKFIFLGDVYGK-----------AGRNIIKNNLAQLKSK-YQADLVIVNAENTTHGKGLS---LKHYEFLK--EAGVNY 66 (281)
T ss_dssp CCEEEEECEEBHH-----------HHHHHHHTTHHHHHHH-HTCSEEEEECTBTTTTSSCC---HHHHHHHH--HHTCCE
T ss_pred eEEEEEECCcCCh-----------HHHHHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCCcC---HHHHHHHH--hcCCCE
Confidence 4689999998632 1233344455555432 2579999999997654 221 11222221 234444
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccc--cccCCCCCCCCCCCCCCCCCceEEEEeCcEE--EEEEe
Q 006938 290 HVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLK--FHMPGNSLEPTGTRAPATRNLYYSFDMGVVH--FVYIS 365 (625)
Q Consensus 290 ~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~--f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~--fI~LD 365 (625)
+ ++||||++... . ++ +|... .-.|.|-+. +......+..|.-++.++++ +|.+-
T Consensus 67 ~-TlGNHefD~g~-~--------~~----------~~l~~~~~v~~aN~p~--~~~~~~~g~g~~I~e~~G~kIgVIgl~ 124 (281)
T 1t71_A 67 I-TMGNHTWFQKL-D--------LA----------VVINKKDLVRPLNLDT--SFAFHNLGQGSLVFEFNKAKIRITNLL 124 (281)
T ss_dssp E-ECCTTTTCCGG-G--------HH----------HHTTCTTEECBSCBCT--TSTTTTSSBSEEEEECSSCEEEEEEEE
T ss_pred E-EEccCcccCCc-c--------HH----------HHhhhcCEEeeccCCc--ccccccCCCCeEEEEECCEEEEEEEee
Confidence 4 67999997320 0 00 01100 111111110 00000012346667777644 55554
Q ss_pred CCcccC--CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCc
Q 006938 366 TETNFL--QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRY 443 (625)
Q Consensus 366 T~~~~~--~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~y 443 (625)
+...+. .-+.-.+-+++.++ +.+++.+||.+|.-. . .+ .+.+.. ...-+||+++.||+|..
T Consensus 125 g~~~f~~~~~~~pf~~a~~~v~---~~~~diIIv~~H~g~----------t-~E--k~~la~-~~dg~VD~VvGgHTHv~ 187 (281)
T 1t71_A 125 GTSVPLPFKTTNPFKVLKELIL---KRDCDLHIVDFHAET----------T-SE--KNAFCM-AFDGYVTTIFGTHTHVP 187 (281)
T ss_dssp CTTSCCSSCBCCHHHHHHHHHT---TCCCSEEEEEEECSC----------H-HH--HHHHHH-HHTTTSSEEEEESSSSC
T ss_pred ccccccCccccCHHHHHHHHHh---hcCCCEEEEEeCCCc----------h-HH--HHHHHH-hCCCCeEEEEeCCCCcC
Confidence 432122 12223445666665 356788999999511 0 11 112222 12246999999999985
Q ss_pred e
Q 006938 444 E 444 (625)
Q Consensus 444 e 444 (625)
.
T Consensus 188 t 188 (281)
T 1t71_A 188 S 188 (281)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0079 Score=60.34 Aligned_cols=170 Identities=18% Similarity=0.130 Sum_probs=85.7
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC-CchhhHHHHHHhHHHhhcCCceEE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR-GYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~-g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
+++++||.=. ......++.+++.+++ .. |+++..|+.+..+ +... ...+.+. ...+-.+
T Consensus 2 ~ilf~GDv~g-----------~~G~~~~~~~l~~lr~--~~-d~vi~nge~~~~G~g~~~---~~~~~l~--~~G~Da~- 61 (255)
T 1t70_A 2 RVLFIGDVFG-----------QPGRRVLQNHLPTIRP--QF-DFVIVNMENSAGGFGMHR---DAARGAL--EAGAGCL- 61 (255)
T ss_dssp EEEEECCBBH-----------HHHHHHHHHHHHHHGG--GC-SEEEEECTBTTTTSSCCH---HHHHHHH--HHTCSEE-
T ss_pred EEEEEeccCC-----------hHHHHHHHHHHHHHHh--hC-CEEEECCCCccCCcCCCH---HHHHHHH--hCCCCEE-
Confidence 6788999621 1123345555655543 23 9999999987654 3221 1122221 2345555
Q ss_pred ccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccc----cccCCCCCCCCCCCCCCCCCceEEEEeCcEE--EEEEe
Q 006938 292 CIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLK----FHMPGNSLEPTGTRAPATRNLYYSFDMGVVH--FVYIS 365 (625)
Q Consensus 292 v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~----f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~--fI~LD 365 (625)
++||||++... . ..+... .-.|.|-+. .+. | +..|.-++.++.+ +|.|-
T Consensus 62 TlGNHefD~~~------l--------------~~~l~~~~~~~~~~aN~~~-~~~--p--g~g~~I~~~~G~kIgVigl~ 116 (255)
T 1t70_A 62 TLGNHAWHHKD------I--------------YPMLSEDTYPIVRPLNYAD-PGT--P--GVGWRTFDVNGEKLTVVNLL 116 (255)
T ss_dssp ECCTTTTSSTT------H--------------HHHHHTTCSCEECCSCCCC-TTC--S--SCSEEEEECSSSEEEEEEEE
T ss_pred EeccccccCch------H--------------HHHHhhCCCcEEEEeccCC-CCC--C--CCCeEEEEECCEEEEEEEee
Confidence 56999997320 0 001110 111322210 011 1 2346667877644 55554
Q ss_pred CCcccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 366 TETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 366 T~~~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
+......-..-.+-+++.+++. +.+.+||.+|.-. ..+ .+.+.. ...-+||+++.||+|...
T Consensus 117 g~~~~~~~~~p~~~~~~~v~~l---~~d~IIv~~H~e~------------t~E-k~~la~-~~dg~vd~VvGgHTHv~~ 178 (255)
T 1t70_A 117 GRVFMEAVDNPFRTMDALLERD---DLGTVFVDFHAEA------------TSE-KEAMGW-HLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp CCTTSCCCSCHHHHHHHHTTCS---SCCEEEEEEECSC------------HHH-HHHHHH-HHTTSSSEEEEESSCSCB
T ss_pred cCcCcccccCHHHHHHHHHHHh---CCCEEEEEeCCCC------------hHH-HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 4321112223344566666665 5677999999511 111 112222 223469999999999854
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0016 Score=68.32 Aligned_cols=55 Identities=11% Similarity=0.094 Sum_probs=31.6
Q ss_pred cceEEEEEecCCCCCCCcccc---cchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccC
Q 006938 211 ETIAFLFGDMGAATPYTTFER---TQDESISTMKWILRDIEALGDKPAFVSHIGDISYA 266 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~---~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~ 266 (625)
.++++.+.|+|..-....+.. ........++.+++.+++.. ...++|.+||++..
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~-~~~llld~GD~~qG 68 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQN-PNTLLVDNGDLIQG 68 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHC-SSEEEEECSCCSCS
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcC-CCEEEEecCccCCC
Confidence 467899999997532111100 01112345566677666542 23578899999853
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0034 Score=70.17 Aligned_cols=54 Identities=15% Similarity=0.327 Sum_probs=31.3
Q ss_pred HHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHH-cCceE-EEEcCccCce
Q 006938 378 NFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVE-NNVTL-ALWGHVHRYE 444 (625)
Q Consensus 378 ~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~k-y~Vdl-vlsGH~H~ye 444 (625)
+|+++.++ .+...+|+++|.+.... .+. . ....+. +.+. .+||+ +|.||.|...
T Consensus 188 ~~v~~l~~----~~~D~IIvL~H~G~~~~----~d~-~-~~~~~~---lA~~~~giDilIlgGHtH~~~ 243 (557)
T 3c9f_A 188 PWFQEALK----HEVDLIIIVGHTPISHN----WGE-F-YQVHQY---LRQFFPDTIIQYFGGHSHIRD 243 (557)
T ss_dssp HHHHHHTT----SCCSEEEEECSSCCCTT----TCH-H-HHHHHH---HHHHCTTSEEEEEECSSCCEE
T ss_pred HHHHHHHh----cCCCEEEEecccCcccc----Ccc-c-cHHHHH---HHHhCCCCCEEEECCCCCCCC
Confidence 46665442 35777999999987310 111 1 111112 2222 48994 9999999973
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.045 Score=57.20 Aligned_cols=85 Identities=13% Similarity=0.182 Sum_probs=45.2
Q ss_pred cceEEEEEecCCCCCCCcc-cc--cchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHH---------
Q 006938 211 ETIAFLFGDMGAATPYTTF-ER--TQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFA--------- 278 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~-~~--~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~--------- 278 (625)
.++++...|+|..-....+ .. ........++.+++++++.. ...++|.+||++... .|..++.
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~-~n~llld~GD~~qGs----~~~~~~~~~~~~~g~~ 82 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEV-KNSVLVDNGDVIQGS----PLGDYMAAKGLKEGDV 82 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTC-SCEEEEECSCCSSSS----HHHHHHHHHCCCTTCC
T ss_pred eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhC-CCEEEEECCCCCCCc----hhHHhhhhcccccccc
Confidence 4688999999875321111 00 01123445566677766532 224889999998532 2222211
Q ss_pred -hHHHhhcCCc-eEEccCCCCCCC
Q 006938 279 -LIEPVASRVA-YHVCIGNHEYDW 300 (625)
Q Consensus 279 -~l~~~~~~iP-~~~v~GNHD~~~ 300 (625)
.+-.++..+. =++++||||++.
T Consensus 83 ~p~~~~mn~lg~D~~t~GNHEfd~ 106 (339)
T 3jyf_A 83 HPVYKAMNTLNYAVGNLGNHEFNY 106 (339)
T ss_dssp CHHHHHHTTSCCSEEECCGGGGTT
T ss_pred hHHHHHHHhcCCCEEecchhhhhc
Confidence 1222233332 255789999963
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.019 Score=63.59 Aligned_cols=84 Identities=14% Similarity=0.228 Sum_probs=43.8
Q ss_pred ceEEEEEecCCCCCCCccccc---c----hhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHH--hHHH
Q 006938 212 TIAFLFGDMGAATPYTTFERT---Q----DESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFA--LIEP 282 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~---q----~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~--~l~~ 282 (625)
++++.+.|+|..-....+... . ......++.+++++++.. .--++|.+||++.... +..+++ .+-.
T Consensus 4 LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~-~n~llldaGD~~qGs~----~~~~~~g~~~i~ 78 (530)
T 4h1s_A 4 LTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAE-PNVLLLDAGDQYQGTI----WFTVYKGAEVAH 78 (530)
T ss_dssp EEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHC-SSEEEEECSCCSCSSH----HHHHHTTHHHHH
T ss_pred EEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhC-cCeEEEEeCCcccchH----HHHHhCChHHHH
Confidence 578889999864321110000 0 012344566666665532 2358889999986432 222211 1112
Q ss_pred hhcCCce-EEccCCCCCCC
Q 006938 283 VASRVAY-HVCIGNHEYDW 300 (625)
Q Consensus 283 ~~~~iP~-~~v~GNHD~~~ 300 (625)
++..+.+ ..++||||++.
T Consensus 79 ~mN~lgyDa~~lGNHEFd~ 97 (530)
T 4h1s_A 79 FMNALRYDAMALGNHEFDN 97 (530)
T ss_dssp HHHHTTCCEEECCGGGGTT
T ss_pred HHhccCCCEEEEchhhhcc
Confidence 2333333 56799999974
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0015 Score=63.78 Aligned_cols=67 Identities=21% Similarity=0.279 Sum_probs=44.1
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHV 291 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~ 291 (625)
.+++++||.|.. ...+..+++.+.. ..++|.++++||+++.+.... +.++.+ ...++++
T Consensus 13 ~~i~visDiHg~-------------~~~l~~~l~~~~~-~~~~d~~i~~GD~~~~g~~~~---~~~~~l----~~~~~~~ 71 (221)
T 1g5b_A 13 RNIWVVGDLHGC-------------YTNLMNKLDTIGF-DNKKDLLISVGDLVDRGAENV---ECLELI----TFPWFRA 71 (221)
T ss_dssp SCEEEECCCTTC-------------HHHHHHHHHHHTC-CTTTCEEEECSCCSSSSSCHH---HHHGGG----GSTTEEE
T ss_pred ceEEEEEcCCCC-------------HHHHHHHHHHccC-CCCCCEEEEeCCccCCCCChH---HHHHHH----hcCCEEE
Confidence 579999999853 2234555554421 246899999999997554321 222222 3468999
Q ss_pred ccCCCCCC
Q 006938 292 CIGNHEYD 299 (625)
Q Consensus 292 v~GNHD~~ 299 (625)
+.||||..
T Consensus 72 v~GNhd~~ 79 (221)
T 1g5b_A 72 VRGNHEQM 79 (221)
T ss_dssp CCCHHHHH
T ss_pred EccCcHHH
Confidence 99999974
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0043 Score=62.48 Aligned_cols=66 Identities=18% Similarity=0.339 Sum_probs=42.9
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCC-CcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceE
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDK-PAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYH 290 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~-pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~ 290 (625)
.+++++||.|.. ...++.+++.+.. .. .|.++++||+++.+.... +.++.+. ..+++
T Consensus 19 ~~i~visDiHg~-------------~~~l~~~l~~~~~--~~~~d~ii~~GD~vd~g~~~~---~~l~~l~----~~~~~ 76 (262)
T 2qjc_A 19 GRVIIVGDIHGC-------------RAQLEDLLRAVSF--KQGSDTLVAVGDLVNKGPDSF---GVVRLLK----RLGAY 76 (262)
T ss_dssp SCEEEECCCTTC-------------HHHHHHHHHHHTC--CTTTSEEEECSCCSSSSSCHH---HHHHHHH----HHTCE
T ss_pred CeEEEEeCCCCC-------------HHHHHHHHHHHhc--cCCCCEEEEecCCCCCCCCHH---HHHHHHH----HCCCE
Confidence 379999999843 2345556554432 33 499999999997654322 1222222 24899
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
++.||||..
T Consensus 77 ~v~GNHd~~ 85 (262)
T 2qjc_A 77 SVLGNHDAK 85 (262)
T ss_dssp ECCCHHHHH
T ss_pred EEeCcChHH
Confidence 999999974
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.04 Score=46.83 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=57.7
Q ss_pred CCceeEEEEecC-CCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 99 TGPRAGALGFTE-DASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 99 ~~P~qv~L~~~~-~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
..|..+.+.... .++++.|.|..... ..-.|+|....+..... -...... +...
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~------------------~~~~ 69 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDD--WIMETIS------------------GDRL 69 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTT--SEEEEEE------------------TTCC
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccc--eEEEEEC------------------CCce
Confidence 458888887654 46899999986542 13567887644321000 0000111 1124
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
.++|++|+|+|.|.+||..-. +.||+...|+|.+..
T Consensus 70 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 109 (114)
T 2ede_A 70 THQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVS 109 (114)
T ss_dssp EEEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCC
Confidence 678999999999999998632 468889999998654
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0043 Score=63.21 Aligned_cols=68 Identities=16% Similarity=0.287 Sum_probs=42.9
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++||.|.. ...+..+++.+.. ..++|.++++||+++.+.... +.++.+..+ ..+++.+
T Consensus 2 ~i~vigDiHG~-------------~~~l~~ll~~~~~-~~~~d~~v~lGD~vdrG~~s~---~~l~~l~~l--~~~~~~v 62 (280)
T 2dfj_A 2 ATYLIGDVHGC-------------YDELIALLHKVEF-TPGKDTLWLTGDLVARGPGSL---DVLRYVKSL--GDSVRLV 62 (280)
T ss_dssp CEEEECCCCSC-------------HHHHHHHHHHTTC-CTTTCEEEECSCCSSSSSCHH---HHHHHHHHT--GGGEEEC
T ss_pred eEEEEecCCCC-------------HHHHHHHHHHhCC-CCCCCEEEEeCCcCCCCCccH---HHHHHHHhC--CCceEEE
Confidence 57899999864 2234455544321 146799999999997654332 223333222 2379999
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 63 ~GNHe~~ 69 (280)
T 2dfj_A 63 LGNHDLH 69 (280)
T ss_dssp CCHHHHH
T ss_pred ECCCcHH
Confidence 9999964
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.044 Score=48.12 Aligned_cols=86 Identities=15% Similarity=0.088 Sum_probs=55.8
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCCC---------ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCC
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDGE---------KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDP 168 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~~---------~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~ 168 (625)
...|..+++.-. .++++.|.|...... .-.|+|......... .... .
T Consensus 19 p~~P~~l~~~~~-s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~-----~~~~------------------~ 74 (123)
T 2edd_A 19 MLPPVGVQAVAL-THDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAK-----YKSE------------------D 74 (123)
T ss_dssp SCCCEEEEEEEE-ETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCC-----CCCE------------------E
T ss_pred CCCCcceEEEEc-CCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCcc-----EEEE------------------e
Confidence 356888876543 368999999854311 346778765321000 0000 0
Q ss_pred ceEEEEEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCCC
Q 006938 169 GWIFDAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRNE 207 (625)
Q Consensus 169 ~~~h~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~ 207 (625)
.....++|+||+|+|.|.++|..- .+.||....|+|.+.
T Consensus 75 ~~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 75 TTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp ESSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 012467899999999999999864 256899999999875
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.043 Score=46.32 Aligned_cols=83 Identities=17% Similarity=0.188 Sum_probs=54.7
Q ss_pred CCceeEEEEecC-CCCceEEEEEecCC--C---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 99 TGPRAGALGFTE-DASEMRVMFLAEDG--E---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 99 ~~P~qv~L~~~~-~~~~~~V~W~T~~~--~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
..|..+++.... ..+++.|.|..... . .-.|+|....+...... .. . ..
T Consensus 9 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-------~~----------------~--~~ 63 (108)
T 2dm4_A 9 DAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQ-------RA----------------A--SN 63 (108)
T ss_dssp TSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEE-------EE----------------S--SS
T ss_pred cCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEe-------cC----------------C--cc
Confidence 468888777643 56899999986532 1 24577766554211111 00 0 12
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
.++|++|+|+|.|.+||..-. +.||+...++|.+
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 64 FTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 677999999999999998632 3578888999864
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=95.68 E-value=0.012 Score=61.61 Aligned_cols=75 Identities=15% Similarity=0.089 Sum_probs=44.6
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhC------CCCcEEEEcCccccCCCchhhHHHHHHhHHH--h
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALG------DKPAFVSHIGDISYARGYSWLWDEFFALIEP--V 283 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~------~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~--~ 283 (625)
.+++++||.|.. ...+..+++.+.... .++|.++++||+++.+....+--.++..+.. .
T Consensus 71 ~~i~vigDiHG~-------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~ 137 (342)
T 2z72_A 71 KKVVALSDVHGQ-------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQAR 137 (342)
T ss_dssp CEEEEECCCTTC-------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCC-------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHh
Confidence 579999999864 223445554332111 1579999999999766443221112222211 1
Q ss_pred hcCCceEEccCCCCCC
Q 006938 284 ASRVAYHVCIGNHEYD 299 (625)
Q Consensus 284 ~~~iP~~~v~GNHD~~ 299 (625)
....+++.+.||||..
T Consensus 138 ~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 138 DAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HTTCEEEECCCHHHHH
T ss_pred hCCCeEEEEecCCcHH
Confidence 2345799999999974
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.62 E-value=0.035 Score=47.95 Aligned_cols=85 Identities=14% Similarity=0.128 Sum_probs=54.8
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC-----C----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCc
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG-----E----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPG 169 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~-----~----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~ 169 (625)
..|..+++.-- .++++.|+|..... . .-.|+|......... ..+. ..
T Consensus 10 ~~P~~l~~~~~-s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~------~~~~-----------------~~ 65 (113)
T 1x5j_A 10 MPPVGVQASIL-SHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK------YKNA-----------------NA 65 (113)
T ss_dssp CCCEEEEEEEE-ETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCC------CEEC-----------------CB
T ss_pred CCCcceEEEEe-cCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeE------EEEE-----------------ec
Confidence 45888877554 36899999985431 1 356778763211000 0010 01
Q ss_pred eEEEEEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCCC
Q 006938 170 WIFDAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRNE 207 (625)
Q Consensus 170 ~~h~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~ 207 (625)
-...++|+||+|+|.|.++|..- .+.||....++|.+.
T Consensus 66 ~~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 66 TTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp CSSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CcCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 12468899999999999999863 246888889999765
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.55 E-value=0.025 Score=48.08 Aligned_cols=86 Identities=15% Similarity=0.187 Sum_probs=53.4
Q ss_pred CCceeEEEEecCCCCceEEEEEec--CC----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAE--DG----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~--~~----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
..|..+.+.-.-..+++.|.|... ++ ..-.|+|..........+ +. +...
T Consensus 10 ~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~------~~------------------~~~~ 65 (110)
T 2crz_A 10 GPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREV------YQ------------------GSEV 65 (110)
T ss_dssp CCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEE------EE------------------ESCS
T ss_pred CCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEE------Ee------------------CCcE
Confidence 456666664333467899999543 22 235677775443212111 00 0113
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
..++++|+|++.|.+||..-. +.+|+...++|.+..
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 66 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 567899999999999998632 467888889887643
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.47 E-value=0.15 Score=43.46 Aligned_cols=89 Identities=12% Similarity=0.101 Sum_probs=54.1
Q ss_pred CCceeEEEEecCCCCceEEEEEecC------CC-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED------GE-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~------~~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
..|..+++.-. +++++.|.|.... .. .-.|+|........... ...... +-.
T Consensus 10 ~~P~~~~~~~~-~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~--~~~~~~------------------~~~ 68 (114)
T 1x4y_A 10 AGPYITFTDAV-NETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDY--KKDMVE------------------GDR 68 (114)
T ss_dssp SCCEEEEEECS-SSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGC--CCEEEE------------------TTC
T ss_pred CCCeEEEEEec-CCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcce--eeEecC------------------CcE
Confidence 44766665443 4689999998653 11 24577765443200000 000000 111
Q ss_pred EEEEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRNED 208 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~~ 208 (625)
..++|++|+|+|.|.+||..- .+.+|+...++|.+..
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~ 109 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARS 109 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCC
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCC
Confidence 357899999999999999863 2468889999998653
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.43 E-value=0.047 Score=46.16 Aligned_cols=85 Identities=16% Similarity=0.235 Sum_probs=52.8
Q ss_pred CceeEEEEecCCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
.|..+++.- ...+++.|.|..... ..-.|+|.......... .... +-...+
T Consensus 13 ~P~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-----~~~~------------------~~~~~~ 68 (111)
T 1x5l_A 13 QVVVIRQER-AGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSY-----STLK------------------AVTTRA 68 (111)
T ss_dssp CCCCEECSC-BCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSC-----EEEE------------------ESSSEE
T ss_pred CCceEEEEE-cCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeE-----EEec------------------CCCCEE
Confidence 355555433 245889999975431 23457777654211110 0110 012367
Q ss_pred EEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 175 VIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
+|++|+|+|.|.+||..-. +.||+...|+|.+..
T Consensus 69 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 106 (111)
T 1x5l_A 69 TVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPS 106 (111)
T ss_dssp EECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTT
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCC
Confidence 7999999999999998632 468899999998754
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.40 E-value=0.13 Score=43.94 Aligned_cols=87 Identities=13% Similarity=0.113 Sum_probs=55.6
Q ss_pred CCCceeEEEEecCCCCceEEEEEecC-C-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAED-G-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~-~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
+..|..+++... ..+++.|.|.... . ..-.|+|.......... ... ...-.
T Consensus 18 P~~P~~l~~~~~-~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~-------~~~---------------~~~~~ 74 (120)
T 1x5f_A 18 PSAPRDVVASLV-STRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERV-------ENT---------------SHPGE 74 (120)
T ss_dssp CCCCEEEEEEEE-CSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEE-------EEC---------------SSTTC
T ss_pred CCCCCCcEEEec-CCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceE-------EEe---------------ccCCc
Confidence 356777777554 3578999998653 1 13568887764322111 000 00112
Q ss_pred EEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
..++|+||+|+|.|.+||..-. +.+|+...|+|.+.
T Consensus 75 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 75 MQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 4678999999999999998632 25788889999754
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.35 E-value=0.055 Score=45.75 Aligned_cols=36 Identities=31% Similarity=0.393 Sum_probs=29.4
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
.++|+||+|+|.|.+||..-. +.+|+...++|.+..
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 567899999999999999632 458889999998654
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.19 E-value=0.04 Score=46.57 Aligned_cols=86 Identities=15% Similarity=0.147 Sum_probs=52.9
Q ss_pred CceeEEEEecCCCCceEEEEEecC--C---C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED--G---E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~--~---~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
.|..+.+.... .+ +.|.|.... + . .-.|+|........... ..... ..+-...
T Consensus 9 ~P~~~~~~~~~-~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~---~~~~~----------------~~~~~~~ 67 (105)
T 2haz_A 9 SPSIDQVEPYS-ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK---WYDAK----------------EASMEGI 67 (105)
T ss_dssp CCEEEEEEECS-SC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEE---EEEHH----------------HHHHHSE
T ss_pred CCCCCEEEEcC-Cc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccc---eEEcc----------------ccCCccE
Confidence 37777666554 34 999998643 1 1 24588877654211100 00000 0011246
Q ss_pred EEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 174 AVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
++|+||+|+|.|.+||..-. +.+|+...|+|.|
T Consensus 68 ~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 68 VTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 67999999999999998632 4678889999987
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.04 E-value=0.064 Score=45.19 Aligned_cols=85 Identities=14% Similarity=0.131 Sum_probs=52.1
Q ss_pred CceeEEEEecCCCCceEEEEEecCCC-----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDGE-----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~~-----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
.|..+++.-. ..+++.|.|...... .-.|+|........... ... .-...+
T Consensus 10 ~P~~l~~~~~-~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~~------------------~~~~~~ 65 (108)
T 2djs_A 10 TVPIMHQVSA-TMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSS-----MAR------------------SQTNTA 65 (108)
T ss_dssp CCSCCEEEEE-CSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCE-----EEE------------------ESSSEE
T ss_pred CCcceEEEec-CCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCccee-----EEe------------------cCccEE
Confidence 4666665433 357899999765321 24566765543211100 000 011356
Q ss_pred EEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 175 VIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
+|+||+|+|.|.+||..-. +.||+...|+|.+..
T Consensus 66 ~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 66 RIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 7999999999999998632 357888899998753
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.96 E-value=0.15 Score=42.31 Aligned_cols=86 Identities=13% Similarity=0.026 Sum_probs=53.1
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
..|..+.+.-. ..+++.|.|..... ..-.|+|.......... ... ......++
T Consensus 9 ~~P~~~~~~~~-~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~------~~~-----------------~~~~~~~~ 64 (106)
T 2dju_A 9 KPPIDLVVTET-TATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQ------EVD-----------------GVATTRYS 64 (106)
T ss_dssp CCCEEEEEEEE-ETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCC------CBC-----------------CCCSSEEE
T ss_pred cCCCCcEEEec-cCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeE------Ecc-----------------CCCccEEE
Confidence 45777766543 35799999986532 23557776554320000 000 00113467
Q ss_pred EcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 176 IKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
|++|+|++.|.|||..-. +.+|+...++|.+..
T Consensus 65 i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 65 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp EESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred EeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 899999999999999632 357888888887643
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=94.94 E-value=0.044 Score=56.45 Aligned_cols=70 Identities=19% Similarity=0.139 Sum_probs=43.1
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhc--CCce
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVAS--RVAY 289 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~--~iP~ 289 (625)
.+++++||.|.. ...+..+++.+. ....+.++++||+++.+....+ -+..+..+.. .-.+
T Consensus 50 ~~i~viGDIHG~-------------~~~L~~ll~~~~--~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v 111 (309)
T 2ie4_C 50 CPVTVCGDVHGQ-------------FHDLMELFRIGG--KSPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRYRERI 111 (309)
T ss_dssp SSEEEECCCTTC-------------HHHHHHHHHHHC--CTTTSCEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTE
T ss_pred CCEEEEecCCCC-------------HHHHHHHHHHcC--CCCCCEEEEeCCccCCCCChHH---HHHHHHHHHhhCCCcE
Confidence 358999999864 223445555432 2345778999999986643322 2233322222 2359
Q ss_pred EEccCCCCCC
Q 006938 290 HVCIGNHEYD 299 (625)
Q Consensus 290 ~~v~GNHD~~ 299 (625)
+.+.||||..
T Consensus 112 ~~lrGNHE~~ 121 (309)
T 2ie4_C 112 TILRGNHESR 121 (309)
T ss_dssp EECCCTTSST
T ss_pred EEEeCCCCHH
Confidence 9999999985
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.83 E-value=0.15 Score=42.62 Aligned_cols=83 Identities=11% Similarity=-0.015 Sum_probs=53.0
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+++... ..+++.|.|..... ..-.|+|.......... ... . ...
T Consensus 9 ~~P~~l~~~~~-~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-------~~~----------------~--~~~ 62 (106)
T 2ed8_A 9 GPVENLQAVST-SPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQN-------IEV----------------D--GLS 62 (106)
T ss_dssp CCCEEEEEECS-STTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEE-------EEE----------------C--SSC
T ss_pred cCCceeEEEec-CCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEE-------EeC----------------C--ccE
Confidence 35777776544 35799999986531 13567776654321110 100 0 134
Q ss_pred EEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 174 AVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
++|++|+|+|.|.+||..-. +.+|+...|+|.+.
T Consensus 63 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 63 YKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 66899999999999998642 24678888988754
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.026 Score=47.01 Aligned_cols=81 Identities=14% Similarity=-0.023 Sum_probs=49.9
Q ss_pred CceeEEEEecCCCCceEEEEEecC----C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED----G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~----~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
.|..+++... ..+++.|.|.... + ..-.|+|......... .... -..
T Consensus 11 ~P~~l~~~~~-~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~-------~~~~------------------~~~ 64 (103)
T 2edy_A 11 FPQNLHVTGL-TTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQEL-------QNIT------------------TDT 64 (103)
T ss_dssp CCEEEECSSB-CSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEE-------EEEE------------------SSS
T ss_pred CCeeeEEEec-CCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccE-------EEcC------------------Ccc
Confidence 4666665332 4588999998661 1 1345777665432111 0000 012
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
.++|+||+|+|.|.+||..-. +.+|+...|+|.|
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 65 RFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 456899999999999998632 3577777788765
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.81 E-value=0.1 Score=44.29 Aligned_cols=83 Identities=13% Similarity=0.030 Sum_probs=52.5
Q ss_pred CCceeEEEEecCCCCceEEEEEecC--C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED--G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~--~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+++... ..+++.|.|.... + ..-.|+|............ .....
T Consensus 19 ~~P~~l~~~~~-~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-------------------------~~~~~ 72 (116)
T 1x5g_A 19 GPAPNLRAYAA-SPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVD-------------------------VSSHS 72 (116)
T ss_dssp CCCSSCEEEEE-ETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEE-------------------------ECSSE
T ss_pred cCCCccEEEec-CCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEe-------------------------cCCce
Confidence 34666666433 3578999997542 1 1356777665432111110 01136
Q ss_pred EEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCCC
Q 006938 174 AVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRNE 207 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~ 207 (625)
++|+||+|+|.|.+||..- .+.+|+...|+|.+.
T Consensus 73 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 73 YTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 7799999999999999863 245788888998764
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.74 E-value=0.13 Score=43.88 Aligned_cols=87 Identities=13% Similarity=0.105 Sum_probs=54.3
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC--C---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG--E---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~--~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
...|..+++... ..+++.|.|..... . .-.|+|........... .. ...-..
T Consensus 18 P~~P~~l~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~-----------------~~~~~~ 74 (119)
T 2ed7_A 18 PSAPRDVVPVLV-SSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERAL-----NT-----------------TQPGSL 74 (119)
T ss_dssp CCCCSCCEEEEE-CSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEE-----EC-----------------CCTTCC
T ss_pred CcCCcceEEEec-CCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceee-----Ee-----------------ecCCce
Confidence 345777776653 46789999975432 1 24567766543221110 00 001134
Q ss_pred EEEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~ 207 (625)
.++|++|+|+|.|.+||..- .+.+|+...++|.+.
T Consensus 75 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 75 QLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 67899999999999999863 246788889998764
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.70 E-value=0.1 Score=44.20 Aligned_cols=85 Identities=13% Similarity=0.166 Sum_probs=53.2
Q ss_pred CCceeEEEEecCCCCceEEEEEecCCC---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDGE---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
..|..+++.-. ..+++.|.|...... .-.|+|........... . . .. ...++
T Consensus 19 ~~P~~l~~~~~-~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~-----~--------------~---~~--~~~~~ 73 (115)
T 1x5z_A 19 GQPLNFKAEPE-SETSILLSWTPPRSDTIANYELVYKDGEHGEEQRI-----T--------------I---EP--GTSYR 73 (115)
T ss_dssp CCCEEEEEECS-SSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCC-----E--------------E---CS--SSEEE
T ss_pred CCCccCEeeeC-CCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEE-----e--------------c---CC--CcEEE
Confidence 35777776433 468999999865432 34566655432211000 0 0 01 13677
Q ss_pred EcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 176 IKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
|+||+|+|.|.+||..-. +.||+...|+|.+..
T Consensus 74 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 74 LQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp EECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred ECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 999999999999998632 357888899998643
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=94.68 E-value=0.048 Score=56.72 Aligned_cols=69 Identities=14% Similarity=0.060 Sum_probs=42.6
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHh--hcCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPV--ASRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~--~~~iP~~ 290 (625)
+++++||.|.. ...+..+++.+. ....+-++++||+++.+....+ -+..+..+ ...-.++
T Consensus 58 ~i~viGDIHG~-------------~~~L~~ll~~~g--~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~ 119 (330)
T 1fjm_A 58 PLKICGDIHGQ-------------YYDLLRLFEYGG--FPPESNYLFLGDYVDRGKQSLE---TICLLLAYKIKYPENFF 119 (330)
T ss_dssp SEEEECBCTTC-------------HHHHHHHHHHHC--STTSSCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEE
T ss_pred ceEEecCCCCC-------------HHHHHHHHHHhC--CCCcceEEeCCCcCCCCCChHH---HHHHHHHhhhhcCCceE
Confidence 58999999865 234455555432 1345778999999986643321 22222222 2234589
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 120 ~lrGNHE~~ 128 (330)
T 1fjm_A 120 LLRGNHECA 128 (330)
T ss_dssp ECCCTTSSH
T ss_pred EecCCchHh
Confidence 999999974
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.61 E-value=0.28 Score=41.57 Aligned_cols=83 Identities=12% Similarity=0.100 Sum_probs=53.4
Q ss_pred CCCceeEEEEecC-CCCceEEEEEecCC--------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCC
Q 006938 98 GTGPRAGALGFTE-DASEMRVMFLAEDG--------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDP 168 (625)
Q Consensus 98 ~~~P~qv~L~~~~-~~~~~~V~W~T~~~--------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~ 168 (625)
...|..+++.... .++++.|.|..... ..-.|+|....+........ . .
T Consensus 8 p~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~-----~-----------------~ 65 (109)
T 1uc6_A 8 PDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL-----S-----------------N 65 (109)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE-----S-----------------S
T ss_pred cCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEec-----c-----------------c
Confidence 3568888887653 46899999986532 24678888765431111100 0 0
Q ss_pred ceEEEEEEcCCCCCcEEEEEEecCC---C---CcceeEEEEc
Q 006938 169 GWIFDAVIKGLKKGVRYYYKVGSDS---K---GWSETHSFVS 204 (625)
Q Consensus 169 ~~~h~a~ltgL~PgT~Y~YrV~~~~---~---~~S~~~~F~T 204 (625)
...+.|.+|+|||.|..||.... + .||+...++|
T Consensus 66 --~~~~~l~~L~p~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~ 105 (109)
T 1uc6_A 66 --GTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp --CSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred --CCEEEEeCCCCCCEEEEEEEEEeCCCCCcCcCCCCeeeee
Confidence 12567899999999999999752 2 4566665554
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=94.57 E-value=0.18 Score=48.72 Aligned_cols=85 Identities=14% Similarity=0.189 Sum_probs=56.7
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCCC------ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDGE------KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~~------~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
...|..+++......+++.|.|...... .-.|+|....+...... .... .-.
T Consensus 122 p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~----~~~~------------------~~~ 179 (227)
T 1eer_B 122 LDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQR----VEIL------------------EGR 179 (227)
T ss_dssp CCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCE----EEEC------------------TTC
T ss_pred cCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEE----EEEe------------------cCc
Confidence 5678888888765578999999865421 35788876543211110 0000 011
Q ss_pred EEEEEcCCCCCcEEEEEEecCC---------CCcceeEEEEc
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS---------KGWSETHSFVS 204 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~---------~~~S~~~~F~T 204 (625)
..+.|.+|+|||.|..||.... +.||+...|+|
T Consensus 180 ~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t 221 (227)
T 1eer_B 180 TECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLT 221 (227)
T ss_dssp CEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC
T ss_pred eEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEEC
Confidence 3667899999999999999641 46788889998
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.53 E-value=0.11 Score=43.89 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=28.3
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
.+++++|+|+|.|.|||..-. +.+|+...++|.+..
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 104 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDS 104 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCCC
Confidence 567899999999999999743 246777888887643
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=94.45 E-value=0.078 Score=54.68 Aligned_cols=72 Identities=18% Similarity=0.116 Sum_probs=42.3
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh--cCCc
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA--SRVA 288 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~--~~iP 288 (625)
..+++++||.|.. ...+..+++.+. .....+.++++||+++.+....+ -+..+..+. ..-.
T Consensus 59 ~~ri~viGDIHG~-------------~~~L~~ll~~~g-~~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~ 121 (315)
T 3h63_A 59 TEKITVCGDTHGQ-------------FYDLLNIFELNG-LPSETNPYIFNGDFVDRGSFSVE---VILTLFGFKLLYPDH 121 (315)
T ss_dssp TCEEEEECCCTTC-------------HHHHHHHHHHHC-CCBTTBCEEEESCCSSSSTTHHH---HHHHHHHHHHHSTTT
T ss_pred CceEEEEecCCCC-------------HHHHHHHHHHhC-CCCCCCEEEEeCCccCCCcChHH---HHHHHHHhhhhcCCc
Confidence 3579999999875 223444544331 11233569999999987643321 122222222 2335
Q ss_pred eEEccCCCCCC
Q 006938 289 YHVCIGNHEYD 299 (625)
Q Consensus 289 ~~~v~GNHD~~ 299 (625)
++.+.||||..
T Consensus 122 v~~lrGNHE~~ 132 (315)
T 3h63_A 122 FHLLRGNHETD 132 (315)
T ss_dssp EEEECCTTSSH
T ss_pred EEEEecCcccc
Confidence 88999999964
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.45 E-value=0.1 Score=44.20 Aligned_cols=86 Identities=17% Similarity=0.207 Sum_probs=53.1
Q ss_pred CceeEEEEecCCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
.|..+++.-. ..+++.|.|..... ..-.|+|....+..... . ..... .. ..+
T Consensus 10 ~p~~l~~~~~-~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~--~~~~~----------------~~--~~~ 66 (109)
T 2e7h_A 10 AVSDIRVTRS-SPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSS--V--RFLKT----------------SE--NRA 66 (109)
T ss_dssp CCCCCEEEEE-ETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTT--S--EEEEE----------------SS--SEE
T ss_pred CCCccEEEec-CCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCce--e--EEEcc----------------CC--CEE
Confidence 3666666433 35789999975431 13567787654211100 0 00000 01 267
Q ss_pred EEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 175 VIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
+|+||+|+|.|.+||..-. +.||+...|+|.+.+
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 67 ELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp EEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred EECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 8999999999999998632 468888999998753
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=94.37 E-value=0.36 Score=40.57 Aligned_cols=88 Identities=11% Similarity=0.035 Sum_probs=50.5
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
..|..+++.- -+.+++.|+|..... ..-.|+|.......... ..... +-...++|
T Consensus 4 ~~P~~l~v~~-~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~----~~~v~------------------~~~~~~~l 60 (104)
T 2rb8_A 4 DAPSQIEVKD-VTDTTALITWMPPSQPVDGFELTYGIKDVPGDRT----TIDLT------------------EDENQYSI 60 (104)
T ss_dssp CCCEEEEEES-CCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCE----EEEEE------------------TTCCEEEE
T ss_pred CCCCccEEEE-ecCCeEEEEEcCCCCccceEEEEEEECcCCCceE----EEEcC------------------CCcCEEEe
Confidence 3577777754 346899999976542 23468887653211110 01111 11236689
Q ss_pred cCCCCCcEEEEEEecCC-CCc--ceeEEEEcCCCCC
Q 006938 177 KGLKKGVRYYYKVGSDS-KGW--SETHSFVSRNEDS 209 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~~-~~~--S~~~~F~T~p~~~ 209 (625)
+||+|||.|.++|..-. .+. .....|+|.+...
T Consensus 61 ~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~~~~~ 96 (104)
T 2rb8_A 61 GNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLAAA 96 (104)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCCEEEEEECCC---
T ss_pred CCCCCCCEEEEEEEEEeCCccCCCEEEEEECCCCcc
Confidence 99999999999998632 122 2345688876543
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.29 E-value=0.25 Score=42.16 Aligned_cols=89 Identities=16% Similarity=0.078 Sum_probs=55.7
Q ss_pred CceeEEEEecCCCCceEEEEEecCC-------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG-------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~-------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
.|..+++... ..+++.|.|..... ..-.|+|.......... +. .......+-..
T Consensus 18 ~P~~~~~~~~-~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~-------~~-----------~~~~~~~~~~~ 78 (122)
T 1va9_A 18 PPMDVTLQPV-TSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQ-------YS-----------IVEMKATGDSE 78 (122)
T ss_dssp CCEEEEEEEC-SSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCS-------CB-----------CCBCCCCSSEE
T ss_pred CCcceEEEec-cCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcc-------eE-----------EEEEecCCcee
Confidence 5777777543 46899999986532 13457776654321100 00 00000123457
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
.++|+||+|+|.|.+||..-. +.+|+...|+|.+.
T Consensus 79 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 79 VYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 888999999999999998632 45788888888754
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.25 E-value=0.25 Score=42.21 Aligned_cols=87 Identities=16% Similarity=0.192 Sum_probs=53.3
Q ss_pred CceeEEEEecCCCCceEEEEEecCC---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
.|..+++.-. +.+++.|.|..... ..-.|+|....+.... ....... +....++|
T Consensus 21 ~P~~l~~~~~-~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~---~~~~~~~------------------~~~~~~~i 78 (119)
T 2ee2_A 21 APTEVGVKVL-SSSEISVHWEHVLEKIVESYQIRYWAAHDKEEA---ANRVQVT------------------SQEYSARL 78 (119)
T ss_dssp CCCSCEEEEE-ETTEEEEECCCCSCTTCCEEEEEEEESSSCGGG---CEEEEEE------------------TTCSEEEE
T ss_pred CCCcEEEEEc-cCCEEEEEecCCCCCccceEEEEEEECCCcccC---cEEEEcC------------------CCEeEEEE
Confidence 4556665433 35789999976542 2356777665432111 0001110 11246789
Q ss_pred cCCCCCcEEEEEEecC----CCCcceeEEEEcCCCC
Q 006938 177 KGLKKGVRYYYKVGSD----SKGWSETHSFVSRNED 208 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~~ 208 (625)
+||+|+|.|.+||..- .+.+|+...|+|.+..
T Consensus 79 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ee2_A 79 ENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAS 114 (119)
T ss_dssp CSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCC
T ss_pred CCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCC
Confidence 9999999999999863 2467888899997643
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=94.21 E-value=0.23 Score=47.92 Aligned_cols=88 Identities=9% Similarity=0.085 Sum_probs=58.1
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC-------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG-------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~-------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
..|..+++...+ .+++.|.|..... ..-.|+|....+.+... ..... ..-.
T Consensus 107 ~pP~~l~~~~~~-~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~w~~~---~~~~~------------------~~~~ 164 (214)
T 2b5i_B 107 MAPISLQVVHVE-THRCNISWEISQASHYFERHLEFEARTLSPGHTWEEA---PLLTL------------------KQKQ 164 (214)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTS---CCEEE------------------CSCC
T ss_pred CCCceEEEEEec-CCeEEEEECCCCccccCCCceEEEEEEecCCCChhee---eeeee------------------cccc
Confidence 678888888764 3689999987642 24678887765422210 00111 0112
Q ss_pred EEEEEcCCCCCcEEEEEEecC---C-----CCcceeEEEEcCCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD---S-----KGWSETHSFVSRNED 208 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~---~-----~~~S~~~~F~T~p~~ 208 (625)
+.+.|.+|+|||+|..||... + +.||+...|+|.+..
T Consensus 165 ~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 165 EWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred eEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 477789999999999999953 1 368889999998754
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.08 E-value=0.11 Score=53.95 Aligned_cols=73 Identities=16% Similarity=0.124 Sum_probs=43.1
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh--cCC
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA--SRV 287 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~--~~i 287 (625)
+..+++++||.|.. ...+..+++.+.. ...-+.++++||+++.+....+ -+..+..+. ..-
T Consensus 62 ~~~ri~viGDIHG~-------------~~~L~~ll~~~g~-~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~ 124 (335)
T 3icf_A 62 PDVKISVCGDTHGQ-------------FYDVLNLFRKFGK-VGPKHTYLFNGDFVDRGSWSCE---VALLFYCLKILHPN 124 (335)
T ss_dssp TTCEEEEECCCTTC-------------HHHHHHHHHHHCC-CBTTEEEEECSCCSSSSTTHHH---HHHHHHHHHHHCTT
T ss_pred cCceEEEEecCCCC-------------HHHHHHHHHHcCC-CCCCcEEEEeCCccCCCcChHH---HHHHHHHHhhhCCC
Confidence 44689999999875 2234445544321 1122569999999986643321 122222222 234
Q ss_pred ceEEccCCCCCC
Q 006938 288 AYHVCIGNHEYD 299 (625)
Q Consensus 288 P~~~v~GNHD~~ 299 (625)
.++.+.||||..
T Consensus 125 ~v~llrGNHE~~ 136 (335)
T 3icf_A 125 NFFLNRGNHESD 136 (335)
T ss_dssp TEEECCCTTSSH
T ss_pred cEEEecCchhhh
Confidence 589999999964
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.01 E-value=0.49 Score=39.28 Aligned_cols=81 Identities=11% Similarity=0.147 Sum_probs=48.4
Q ss_pred CceeEEEEecCCCCceEEEEEecCC----C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG----E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~----~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
.|. +.|... ..+++.|.|..... . .-.|+|........... ... .....+
T Consensus 10 ~p~-~~v~~~-~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~~------------------~~~~~~ 64 (107)
T 2dn7_A 10 RPT-MMISTT-AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI-----DFG------------------KDDQHF 64 (107)
T ss_dssp CCE-EEEEEC-STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEE-----EEE------------------TTCCEE
T ss_pred CCc-EeEEec-CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEE-----EeC------------------CCccEE
Confidence 344 555555 56899999986531 1 34688876553221111 110 112356
Q ss_pred EEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 175 VIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
+|++|+|+|.|.+||..-. +.+|. ..|+|..
T Consensus 65 ~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 65 TVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCC
T ss_pred EeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCC
Confidence 7999999999999998632 13444 4577754
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.95 E-value=0.62 Score=38.70 Aligned_cols=71 Identities=14% Similarity=0.116 Sum_probs=44.9
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
..|..+.+.-. +++++.|+|..... ..-.|+|........... ... .+-...++|
T Consensus 3 ~~P~~l~~~~~-~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~----~~~------------------~~~~t~~~i 59 (100)
T 3b83_A 3 QPPFNIKVTNI-TLTTAVVTWQPPILPIEGILVTFGRKNDPSDETT----VDL------------------TSSITSLTL 59 (100)
T ss_dssp CCCEEEEEESC-CSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEE----EEE------------------CTTEEEEEE
T ss_pred ccCCccEEEEe-cCCEEEEEEcCCcccCCEEEEEEEECCCCCCceE----EEE------------------CCcceEEEE
Confidence 34777776643 46899999975542 235688876543211110 011 123457789
Q ss_pred cCCCCCcEEEEEEecC
Q 006938 177 KGLKKGVRYYYKVGSD 192 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~ 192 (625)
+||+|+|.|.+||...
T Consensus 60 ~~L~p~t~Y~~~V~A~ 75 (100)
T 3b83_A 60 TNLEPNTTYEIRIVAR 75 (100)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999864
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=93.92 E-value=0.37 Score=40.92 Aligned_cols=86 Identities=16% Similarity=0.162 Sum_probs=49.0
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCCCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
+..|..+........+++.++|.....+..+.-|............+. ... .. ..+.+
T Consensus 5 P~aP~~l~a~~~~~~~~v~LsW~~~~~~~~Y~VyR~~~~~~~~~~i~~--~~~----------------~t----sy~d~ 62 (103)
T 3mpc_A 5 PAFPTGLSAVLDSSGNTANLTWNAAPGANSYNVKRSTKSGGPYTTIAT--NIT----------------ST----NYTDT 62 (103)
T ss_dssp CCCCEEEEEEECTTSCCEEEEEECCTTCSEEEEEEESSTTCCCEEEEE--EEC----------------SS----EEEET
T ss_pred CCCCceeEEEEeCCCCEEEEEEECCCCCCEEEEEEecCCCCCcEEEee--cCC----------------CC----EEEEC
Confidence 456888877765445789999987665555555554332111111111 000 01 22357
Q ss_pred CCCCCcEEEEEEecCC----CCcceeEEEEcC
Q 006938 178 GLKKGVRYYYKVGSDS----KGWSETHSFVSR 205 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~~----~~~S~~~~F~T~ 205 (625)
+|++|++|+|+|..-+ +..|...+.++.
T Consensus 63 ~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~~ 94 (103)
T 3mpc_A 63 GVATGTKYYYVVSAVSNGVETLNSAEAILQYP 94 (103)
T ss_dssp TCCTTCCCEEEEEEEETTEECCCCCCEECBCC
T ss_pred CCCCCCEEEEEEEEEeCcCCcCCCccEEEECC
Confidence 9999999999998621 234455555443
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.91 E-value=0.48 Score=41.39 Aligned_cols=85 Identities=20% Similarity=0.108 Sum_probs=52.5
Q ss_pred eEEEEecC--CCCceEEEEEecCC----CceEEEEEccCCC---CCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 103 AGALGFTE--DASEMRVMFLAEDG----EKRYVKYGEKKDQ---MGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 103 qv~L~~~~--~~~~~~V~W~T~~~----~~~~V~yg~~~~~---~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
+|+|--.. +++++.|+|..... ..-.|.|.+.+.. .... .... ..+-...
T Consensus 18 ~v~l~~~~a~sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~----~~~v-----------------~~~~~~~ 76 (120)
T 1ujt_A 18 LVRLHNPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQ----NLDA-----------------KVPTERS 76 (120)
T ss_dssp CEEECCCCCCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCE----EEEC-----------------CCTTCCE
T ss_pred EEEeeccEEccCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccE----EEEe-----------------cCCCcCE
Confidence 55553332 36899999985422 1246888876541 0100 0000 0112357
Q ss_pred EEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCCCC
Q 006938 174 AVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRNED 208 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~~ 208 (625)
++|+||+|+|.|..+|..- .+.+|+...|+|+...
T Consensus 77 ~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~v 115 (120)
T 1ujt_A 77 AVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp EEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCCC
Confidence 7899999999999999853 2467888999997643
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.86 E-value=0.29 Score=41.81 Aligned_cols=90 Identities=10% Similarity=-0.001 Sum_probs=52.1
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
..|..+++.-- ..+++.+.|..... ..-.|+|....... . ..... +-...++|
T Consensus 9 ~~P~~l~~~~~-t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~-~-----~~~v~------------------~~~t~~~l 63 (115)
T 2cuh_A 9 DGPTQLRALNL-TEGFAVLHWKPPQNPVDTYDIQVTAPGAPP-L-----QAETP------------------GSAVDYPL 63 (115)
T ss_dssp SSCEEEECCCC-SSSCEEEEEECCSSCCSEEEEEEECSSSCC-E-----EEEEE------------------TTCSEEEE
T ss_pred CCCcceEEEec-cCCeEEEEEECCCCCccEEEEEEEcCCCCc-E-----EEEEC------------------CCccEEEE
Confidence 45776665433 36899999975432 23457786543211 0 01111 11236789
Q ss_pred cCCCCCcEEEEEEecCCC-C--cceeEEEEcCCCCCCcce
Q 006938 177 KGLKKGVRYYYKVGSDSK-G--WSETHSFVSRNEDSNETI 213 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~~~-~--~S~~~~F~T~p~~~~~~~ 213 (625)
+||+|+|.|.++|..-.+ + ......|+|.+.....++
T Consensus 64 ~~L~P~t~Y~~~V~A~~~~~~s~~~~~~~~T~~~~P~~l~ 103 (115)
T 2cuh_A 64 HDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEAPRDLE 103 (115)
T ss_dssp CSCCSSSEEEEEEEEEETTEECCCEEEEEESCCCCTTTSS
T ss_pred eCCCCCCEEEEEEEEEeCCCcCCCEEEEEEeCCCCCCCcE
Confidence 999999999999986322 1 223566888754443333
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=93.85 E-value=0.12 Score=53.03 Aligned_cols=69 Identities=14% Similarity=0.060 Sum_probs=42.2
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHh--hcCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPV--ASRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~--~~~iP~~ 290 (625)
+++++||.|.. ...+..+++.+. ....+-++++||+++.+....+ -+..+..+ ...-.++
T Consensus 57 ~i~viGDIHG~-------------~~~L~~ll~~~g--~~~~~~~vfLGD~VDrG~~s~e---vl~lL~~lk~~~p~~v~ 118 (299)
T 3e7a_A 57 PLKICGDIHGQ-------------YYDLLRLFEYGG--FPPESNYLFLGDYVDRGKQSLE---TICLLLAYKIKYPENFF 118 (299)
T ss_dssp SEEEECBCTTC-------------HHHHHHHHHHHC--STTSSCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEE
T ss_pred CEEEEecCCCC-------------HHHHHHHHHHhC--CCCCccEEeCCcccCCCCCcHH---HHHHHHHHHhhCCCcEE
Confidence 58999999875 234445554432 1345678899999987654321 12222222 2234589
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 119 ~lrGNHE~~ 127 (299)
T 3e7a_A 119 LLRGNHECA 127 (299)
T ss_dssp ECCCTTSSH
T ss_pred EEecCchhh
Confidence 999999974
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=93.84 E-value=0.089 Score=57.24 Aligned_cols=72 Identities=17% Similarity=0.097 Sum_probs=43.0
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHH--hhcCCc
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEP--VASRVA 288 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~--~~~~iP 288 (625)
..+++++||.|.. ...+..+++.+.. ....+-++++||+++.+....+ -+..+.. +...-.
T Consensus 212 ~~~~~vigDiHG~-------------~~~l~~~l~~~~~-~~~~~~~v~lGD~vdrG~~s~e---~~~~l~~l~~~~~~~ 274 (477)
T 1wao_1 212 TEKITVCGDTHGQ-------------FYDLLNIFELNGL-PSETNPYIFNGDFVDRGSFSVE---VILTLFGFKLLYPDH 274 (477)
T ss_dssp SCEEEEECBCTTC-------------HHHHHHHHHHHCC-CBTTBCEEEESCCSSSSTTHHH---HHHHHHHHHHHSTTT
T ss_pred CcceEEEeCCCCC-------------HHHHHHHHHHcCC-CCCcCeEEEeccccCCCcchHH---HHHHHHHHHhhCCCc
Confidence 3579999999864 2234445544321 1223569999999986643221 1222222 223457
Q ss_pred eEEccCCCCCC
Q 006938 289 YHVCIGNHEYD 299 (625)
Q Consensus 289 ~~~v~GNHD~~ 299 (625)
++.+.||||..
T Consensus 275 ~~~lrGNHE~~ 285 (477)
T 1wao_1 275 FHLLRGNHETD 285 (477)
T ss_dssp EEEECCTTSSH
T ss_pred eEeecCCccHH
Confidence 99999999963
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=93.82 E-value=0.52 Score=38.78 Aligned_cols=84 Identities=13% Similarity=0.040 Sum_probs=50.1
Q ss_pred CceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+++.-. .++++.|.|..... ..-.|+|.......... ..... .-...++|+
T Consensus 4 ~P~~l~v~~~-~~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~----~~~~~------------------~~~~~~~i~ 60 (98)
T 3teu_A 4 APTDLQVTNV-TDTSITVSWTPPSATITGYRITYTPSNGPGEPK----ELTVP------------------PSSTSVTIT 60 (98)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSSCCSEEEEEEEETTSCSCCE----EEEEC------------------TTCSEEEEC
T ss_pred CCCceEEEEe-cCCEEEEEEeCCCCcccEEEEEEEECCCCCceE----EEEcC------------------CCcCEEEec
Confidence 4777777543 35789999987642 23568887543311110 01110 112467899
Q ss_pred CCCCCcEEEEEEecCC-CCcceeEEEEcCC
Q 006938 178 GLKKGVRYYYKVGSDS-KGWSETHSFVSRN 206 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~~-~~~S~~~~F~T~p 206 (625)
||+|+|.|.+||..-. .+.|+..++.+++
T Consensus 61 ~L~p~t~Y~~~V~A~n~~G~s~p~~~~~~~ 90 (98)
T 3teu_A 61 GLTPGVEYVVSVYALKDNQESPPLVGTQTT 90 (98)
T ss_dssp SCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred CCCCCCEEEEEEEEEeCCCCCCCeEEEecc
Confidence 9999999999998642 3455554444443
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.77 E-value=0.18 Score=43.82 Aligned_cols=76 Identities=16% Similarity=0.263 Sum_probs=46.4
Q ss_pred CCCCceEEEEEecC-CC----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcE
Q 006938 110 EDASEMRVMFLAED-GE----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVR 184 (625)
Q Consensus 110 ~~~~~~~V~W~T~~-~~----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~ 184 (625)
...+++.+.|.... +. .-.|+|....+..+.... ... +....++|+||+|++.
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~----~~~------------------~~~~~~~l~~L~p~t~ 76 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEK----KVQ------------------GNKDHIILEHLQWTMG 76 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEE----EEE------------------TTTCCEEECCCCTTCC
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeE----EcC------------------CCcCEEEEcCCCCCCE
Confidence 45789999997543 22 257889876433222110 110 1112567999999999
Q ss_pred EEEEEecCC-CCcc--eeEEEEcCCC
Q 006938 185 YYYKVGSDS-KGWS--ETHSFVSRNE 207 (625)
Q Consensus 185 Y~YrV~~~~-~~~S--~~~~F~T~p~ 207 (625)
|.+||...+ .+.| ....|+|.+.
T Consensus 77 Y~frV~A~N~~G~s~pS~~~~~T~~~ 102 (114)
T 2kbg_A 77 YEVQITAANRLGYSEPTVYEFSMPPK 102 (114)
T ss_dssp EEEEEEEECTTSCEEEEEEEECCCCC
T ss_pred EEEEEEEEeCCcCcCCcCCEEEcCCC
Confidence 999999632 2333 3467888654
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=93.68 E-value=0.44 Score=46.54 Aligned_cols=89 Identities=19% Similarity=0.199 Sum_probs=59.2
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecCC-------CceEEEEEccCC-CCCcEEEeeEEEEeeccccCCCCCCcccccCC
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAEDG-------EKRYVKYGEKKD-QMGHVAVASVERYERGQMCDKPANSSIGWRDP 168 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~~-------~~~~V~yg~~~~-~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~ 168 (625)
-...|..+.+.....+.++.|.|..... ..-.|+|..... ...... .. .
T Consensus 112 KPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v-----~~------------------~ 168 (223)
T 3up1_A 112 KPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHV-----NL------------------S 168 (223)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEE-----EE------------------S
T ss_pred EcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEE-----Ee------------------c
Confidence 4577888888887767789999987631 246788887642 111111 00 0
Q ss_pred ceEEEEEEcCCCCCcEEEEEEecCC--------CCcceeEEEEcCCCC
Q 006938 169 GWIFDAVIKGLKKGVRYYYKVGSDS--------KGWSETHSFVSRNED 208 (625)
Q Consensus 169 ~~~h~a~ltgL~PgT~Y~YrV~~~~--------~~~S~~~~F~T~p~~ 208 (625)
.....+.+.+|+|+|.|..||.... +.||+...|+|++..
T Consensus 169 ~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 169 STKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp SSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred CceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 1123456789999999999998531 256788999997653
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.68 E-value=0.13 Score=44.35 Aligned_cols=82 Identities=13% Similarity=0.139 Sum_probs=52.5
Q ss_pred CceeEEEEecCCCCceEEEEEecCC-------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG-------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~-------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
.|..+++... ..+++.|.|..... ..-.|+|....+..... .. .+...
T Consensus 31 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~------~~------------------~~~~~ 85 (124)
T 2ed9_A 31 PPQNVSLEVV-NSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEME------TL------------------EPNNL 85 (124)
T ss_dssp CCBSCCEEEE-ETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEE------EE------------------CSSCS
T ss_pred CCeeeEEEEc-CCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceE------Ee------------------cCCcC
Confidence 4666666443 35789999976532 12457777655421110 01 01124
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
.++|++|+|+|.|.+||..-. +.+|+...|+|..
T Consensus 86 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 86 WYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 567999999999999998632 4688888898864
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.65 E-value=0.2 Score=43.51 Aligned_cols=87 Identities=10% Similarity=0.104 Sum_probs=54.0
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+++... ..+++.|.|..... ..-.|+|.......... ..... ......
T Consensus 29 ~~P~~l~~~~~-~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~---~~~~~------------------~~~~~~ 86 (130)
T 1wfo_A 29 GPPMGILFPEV-RTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTA---TVEVL------------------APSARQ 86 (130)
T ss_dssp CCCCCCEEEEE-CSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCC---CEEEE------------------CTTCCE
T ss_pred CCCCceEEEec-CCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceE---EEEEe------------------CCCceE
Confidence 45777776654 35889999975532 13457776654321100 00000 112356
Q ss_pred EEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 174 AVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
++|++|+|+|.|.+||..-. +.+|+...|+|.+.
T Consensus 87 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 87 YTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 77999999999999998642 24677888988764
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.48 E-value=0.27 Score=43.05 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=26.8
Q ss_pred EEEEcCCCCCcEEEEEEecCC---CCcceeEEEEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS---KGWSETHSFVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~---~~~S~~~~F~T~p~ 207 (625)
..+++||+|+|+|.|||..-+ ..+|+...++|.+.
T Consensus 81 ~~~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 81 HYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEEEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred eEEECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 457889999999999998632 13567778888753
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.46 E-value=0.073 Score=45.81 Aligned_cols=35 Identities=20% Similarity=0.141 Sum_probs=27.1
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
..++++|+|+|.|.|||..-. +.+|+...++|.+.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAV 114 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCC
Confidence 467899999999999999632 35677777777653
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.34 E-value=0.48 Score=38.22 Aligned_cols=19 Identities=32% Similarity=0.539 Sum_probs=16.8
Q ss_pred EEEEcCCCCCcEEEEEEec
Q 006938 173 DAVIKGLKKGVRYYYKVGS 191 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~ 191 (625)
..++++|+||++|+|||..
T Consensus 52 ~~~~~~L~~~t~Y~~~V~A 70 (88)
T 1k85_A 52 TATISGLAADTSYTFTVKA 70 (88)
T ss_dssp EEEECCCCSSCEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEE
Confidence 4568999999999999996
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.33 E-value=0.31 Score=42.15 Aligned_cols=88 Identities=7% Similarity=-0.002 Sum_probs=53.4
Q ss_pred CCceeEEEEecCCCCceEEEEEec--CC--C---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAE--DG--E---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~--~~--~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
..|..+++......+++.|.|.-. .. . .-.|+|......... .-..... ...
T Consensus 20 ~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~---~~~~~~~------------------~~~ 78 (124)
T 2dbj_A 20 VAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISK---ELLEEVG------------------QNG 78 (124)
T ss_dssp SCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEE---EEEEEEE------------------STT
T ss_pred CCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCcc---ceEEEeC------------------CCc
Confidence 357777776444578999999865 21 1 234666432211000 0000000 011
Q ss_pred EEEEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRNE 207 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~ 207 (625)
..++|++|+|+|.|.+||..- .+.+|+...|+|.+.
T Consensus 79 ~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 79 SRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp SCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred ceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 356789999999999999863 246889999999864
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.32 E-value=0.047 Score=46.67 Aligned_cols=36 Identities=17% Similarity=0.214 Sum_probs=28.5
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
..+++||+|+|.|.|||..-. +.||+...++|.+..
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 105 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGS 105 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCC
Confidence 456889999999999998632 357888889887653
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=93.22 E-value=0.34 Score=45.76 Aligned_cols=85 Identities=13% Similarity=0.142 Sum_probs=56.3
Q ss_pred CCCceeEEEEecC---CCCceEEEEEecCC---------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccc
Q 006938 98 GTGPRAGALGFTE---DASEMRVMFLAEDG---------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGW 165 (625)
Q Consensus 98 ~~~P~qv~L~~~~---~~~~~~V~W~T~~~---------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~ 165 (625)
...|..+.+...+ .++++.|.|..... ..-.|+|....+...... ..
T Consensus 103 p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~------~~--------------- 161 (210)
T 3n06_B 103 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIH------FA--------------- 161 (210)
T ss_dssp CCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEE------EE---------------
T ss_pred cCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEE------ec---------------
Confidence 4568888887654 46899999986431 135688877654221110 00
Q ss_pred cCCceEEEEEEcCCCCCcEEEEEEecC--C---CCcceeEEEEcCC
Q 006938 166 RDPGWIFDAVIKGLKKGVRYYYKVGSD--S---KGWSETHSFVSRN 206 (625)
Q Consensus 166 ~~~~~~h~a~ltgL~PgT~Y~YrV~~~--~---~~~S~~~~F~T~p 206 (625)
+-.....|.+|+|+|.|..||... . +.||+...|+|+.
T Consensus 162 ---~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 162 ---GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp ---ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred ---cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 011356799999999999999853 1 4678899999964
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=93.21 E-value=0.16 Score=53.17 Aligned_cols=69 Identities=13% Similarity=0.064 Sum_probs=41.9
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh--cCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA--SRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~--~~iP~~ 290 (625)
+++++||.|.. ...+..+++... ....+-++++||+++.+....+ -+..+..+. ..-.++
T Consensus 71 pi~ViGDIHG~-------------~~dL~~ll~~~g--~~~~~~~vfLGD~VDRG~~s~E---vl~lL~~lk~~~p~~v~ 132 (357)
T 3ll8_A 71 PVTVCGDIHGQ-------------FFDLMKLFEVGG--SPANTRYLFLGDYVDRGYFSIE---CVLYLWALKILYPKTLF 132 (357)
T ss_dssp SEEEECCCTTC-------------HHHHHHHHHHHC--CTTTCCEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTEE
T ss_pred cceeeccCCCC-------------HHHHHHHHHhcC--CCCCcEEEECCCccCCCcChHH---HHHHHHHhhhhcCCcEE
Confidence 58999999875 223444554321 2455789999999986643321 122222222 223488
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 133 llrGNHE~~ 141 (357)
T 3ll8_A 133 LLRGNHECR 141 (357)
T ss_dssp ECCCTTSSH
T ss_pred EEeCchhhh
Confidence 999999974
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.18 E-value=0.096 Score=44.54 Aligned_cols=36 Identities=17% Similarity=0.309 Sum_probs=30.2
Q ss_pred EEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCCC
Q 006938 174 AVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNEDS 209 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~~ 209 (625)
++|+||+|+|.|.+||.... +.||+...|+|.+..+
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~g 103 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSG 103 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCC
Confidence 88999999999999999632 4689999999987543
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.15 E-value=0.27 Score=41.90 Aligned_cols=36 Identities=14% Similarity=0.267 Sum_probs=28.3
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
..++++|+|+|.|.|||..-. +.+|+.-.|+|.+..
T Consensus 74 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 74 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 457899999999999998632 457788888887643
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.04 E-value=0.28 Score=42.50 Aligned_cols=88 Identities=15% Similarity=0.172 Sum_probs=51.3
Q ss_pred CCceeEEEEecCCCCceEEEEEecC--CC----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED--GE----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~--~~----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
..|..+.+.... .+ +.|.|.... +. .-.|+|.......... .+... .. .+-..
T Consensus 9 ~~P~~~~~~~~~-~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~------~~~~~---------~~----~~~~~ 67 (122)
T 2e3v_A 9 SSPSIDQVEPYS-ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS------KWYDA---------KE----ASMEG 67 (122)
T ss_dssp CCCEEEEEEECS-SC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEE------EEEEH---------HH----HHTTT
T ss_pred cCCCccEEEecC-Cc-EEEEECCCCcCCCCcceEEEEEEEECCCCCccc------ceeee---------ee----cCccc
Confidence 337777766553 34 999998543 22 2357776654321110 00000 00 00113
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
.++|++|+|+|.|.+||..-. +.+|+...|+|.|.
T Consensus 68 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 68 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCC
Confidence 577999999999999998632 45788888877764
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=93.02 E-value=0.72 Score=38.61 Aligned_cols=85 Identities=14% Similarity=0.086 Sum_probs=51.3
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC------C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG------E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~------~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
..|..+.+... +++++.|+|..... . .-.|.|.+..+..... ....+.. +-.
T Consensus 6 ~~P~~~~~~~~-s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~--~~~~~v~------------------~~~ 64 (102)
T 3n1f_C 6 TGPHIAYTEAV-SDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSD--YKRDVVE------------------GSK 64 (102)
T ss_dssp SCCEEEEEEEC-SSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGG--CEEEEEE------------------TTC
T ss_pred CCCceeEEEEc-CCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCc--eEEEEEc------------------CCc
Confidence 45777777544 35899999976431 1 3468888765321000 0011111 001
Q ss_pred EEEEEcCCCCCcEEEEEEecC----CCCcceeEEEEc
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVS 204 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T 204 (625)
..++|++|+|+|.|..+|..- .+..|+...++|
T Consensus 65 ~~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 65 QWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred eEEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 246899999999999999852 245677777776
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=93.00 E-value=0.47 Score=44.50 Aligned_cols=90 Identities=16% Similarity=0.176 Sum_probs=55.3
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecC--C---C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCce
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAED--G---E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGW 170 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~--~---~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~ 170 (625)
.+..|..+.+..... ++.|.|.... + . .-.|+|...+....... .+... ..+.
T Consensus 8 ~P~~P~~~~~~~~~~--s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~-----~~~~~--------------~~~~ 66 (209)
T 2vkw_A 8 TPSSPSIDQVEPYSS--TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK-----WYDAK--------------EASM 66 (209)
T ss_dssp CCCCCEEEEEEECSS--CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEE-----EEEHH--------------HHHH
T ss_pred CCcCCcccEeeeccC--eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEe-----Eeecc--------------CCCc
Confidence 445688888766644 6899998653 2 2 24577776553222111 11100 0011
Q ss_pred EEEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 171 IFDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
....++++|+|+|.|.|||..-. +.+|....++|.+.
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 67 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp HSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred cceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 23677999999999999998632 35677778888764
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=92.95 E-value=0.78 Score=43.01 Aligned_cols=85 Identities=13% Similarity=0.131 Sum_probs=52.7
Q ss_pred CCceeEEEEecCCCCceEEEEEecC------C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCc
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED------G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPG 169 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~------~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~ 169 (625)
..|..+++... .+++++|.|.... . ..-.|+|........... ... .
T Consensus 6 ~~P~~l~~~~~-~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~~------------------~ 61 (211)
T 3p4l_A 6 MPPVGVQASIL-SHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYK-----NAN------------------A 61 (211)
T ss_dssp CCCEEEEEEEC-SSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCE-----EEE------------------E
T ss_pred CCCCCEEEEec-CCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEE-----EeC------------------C
Confidence 45777776544 3588999998632 1 135677776543211100 000 1
Q ss_pred eEEEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 170 WIFDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 170 ~~h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
-...++|++|+|+|.|.+||..-. +.+|....++|.+.
T Consensus 62 ~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 62 TTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred CceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 124677999999999999998632 35677888998653
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.78 E-value=0.27 Score=41.87 Aligned_cols=71 Identities=15% Similarity=0.127 Sum_probs=41.3
Q ss_pred CCceeEEEEecCCCCceEEEEEecCCC----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDGE----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~~----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
..|..+++.-. ..+++.|.|...... .-.|+|....+..... .... ..-...+
T Consensus 19 ~~P~~l~~~~~-~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~-----~~~~-----------------~~~~~~~ 75 (118)
T 2yrz_A 19 DTPTRLVFSAL-GPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHR-----LNIP-----------------NPAQTSV 75 (118)
T ss_dssp CCCCCCEECCC-BTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEE-----EEES-----------------CTTCCEE
T ss_pred CCCCceEEEeC-CCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEE-----EEcC-----------------CCCcCEE
Confidence 44666655322 357899999754432 2457776644321110 0000 0112467
Q ss_pred EEcCCCCCcEEEEEEecC
Q 006938 175 VIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~ 192 (625)
+|++|+|+|.|.+||..-
T Consensus 76 ~i~~L~p~t~Y~~~V~A~ 93 (118)
T 2yrz_A 76 VVEDLLPNHSYVFRVRAQ 93 (118)
T ss_dssp EEESCCTTCEEEEEEEEE
T ss_pred EeCCCCCCCEEEEEEEEE
Confidence 789999999999999863
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.78 E-value=0.57 Score=39.70 Aligned_cols=37 Identities=16% Similarity=0.037 Sum_probs=29.6
Q ss_pred EEEEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRNED 208 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~~ 208 (625)
..++|++|+|+|.|.+||..- .+.+|+...|+|.+..
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 116 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGS 116 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCC
Confidence 467899999999999999863 2458888899997643
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=92.72 E-value=0.38 Score=45.45 Aligned_cols=87 Identities=11% Similarity=0.058 Sum_probs=54.7
Q ss_pred CCCceeEEEEecC-----CCCceEEEEEecCC-----CceEEEEE-ccCCCCCcEEEeeEEEEeeccccCCCCCCccccc
Q 006938 98 GTGPRAGALGFTE-----DASEMRVMFLAEDG-----EKRYVKYG-EKKDQMGHVAVASVERYERGQMCDKPANSSIGWR 166 (625)
Q Consensus 98 ~~~P~qv~L~~~~-----~~~~~~V~W~T~~~-----~~~~V~yg-~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~ 166 (625)
...|..+.+.... .++++.|.|..... ..-.|+|. ...+.....+ ....
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~----~~~~---------------- 168 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLV----FHLP---------------- 168 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEE----EEEE----------------
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEE----eccc----------------
Confidence 4567777665542 46889999986531 24678888 4443222211 0110
Q ss_pred CCceEEEEEEcCCCCCcEEEEEEecC----C---CCcceeEEEEcCC
Q 006938 167 DPGWIFDAVIKGLKKGVRYYYKVGSD----S---KGWSETHSFVSRN 206 (625)
Q Consensus 167 ~~~~~h~a~ltgL~PgT~Y~YrV~~~----~---~~~S~~~~F~T~p 206 (625)
+....++|++|+|+|+|..||... . +.||+...|+|..
T Consensus 169 --~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 169 --SSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp --SCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred --CcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 113567899999999999999853 2 2478888898864
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=92.69 E-value=0.19 Score=54.94 Aligned_cols=69 Identities=13% Similarity=0.088 Sum_probs=41.6
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh--cCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA--SRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~--~~iP~~ 290 (625)
+++++||.|.. ...+..+++. .. ....+-++++||+++.+....+ -+..+..+. ..-.++
T Consensus 84 pI~VIGDIHGq-------------~~dL~~LL~~-~g-~p~~d~yVFLGDyVDRGp~S~E---vl~lL~aLk~~~P~~v~ 145 (521)
T 1aui_A 84 PVTVCGDIHGQ-------------FFDLMKLFEV-GG-SPANTRYLFLGDYVDRGYFSIE---CVLYLWALKILYPKTLF 145 (521)
T ss_dssp SEEEECCCTTC-------------HHHHHHHHHH-HC-CTTTCCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEE
T ss_pred ceeeccCCCCC-------------HHHHHHHHHh-cC-CCCcceEEEcCCcCCCCCCHHH---HHHHHHHHhhhCCCeEE
Confidence 58999999875 2234445542 11 2345889999999986654321 122222222 223489
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
.+.||||..
T Consensus 146 lLRGNHE~~ 154 (521)
T 1aui_A 146 LLRGNHECR 154 (521)
T ss_dssp ECCCTTSSH
T ss_pred EecCCccHH
Confidence 999999964
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.54 E-value=1.2 Score=37.23 Aligned_cols=84 Identities=13% Similarity=0.084 Sum_probs=50.3
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC-C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG-E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~-~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
...|..+++.-.. .+++.++|.-... . .-.|+|....... ..... ++-...++
T Consensus 8 p~~P~~l~v~~~~-~~sv~lsW~~p~~~i~~Y~i~y~~~~~~~------~~~~~------------------~~~~ts~~ 62 (105)
T 2cum_A 8 LEAPRDLEAKEVT-PRTALLTWTEPPVRPAGYLLSFHTPGGQT------QEILL------------------PGGITSHQ 62 (105)
T ss_dssp CCCCEEEEEESCC-SSCEEEEEECCSSCCSEEEEEEECTTSCE------EEEEE------------------CSSCSEEE
T ss_pred CCCCCceEEEecc-CCEEEEEEcCCCCccceEEEEEEeCCCce------EEEEE------------------CCCccEEE
Confidence 3457777665443 6889999975442 2 3457787543210 00010 01124678
Q ss_pred EcCCCCCcEEEEEEecCC-CCc--ceeEEEEcCC
Q 006938 176 IKGLKKGVRYYYKVGSDS-KGW--SETHSFVSRN 206 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~~-~~~--S~~~~F~T~p 206 (625)
|+||+|+|.|.++|..-. .+. +....|+|..
T Consensus 63 l~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~T~~ 96 (105)
T 2cum_A 63 LLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGG 96 (105)
T ss_dssp ECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCC
T ss_pred ECCCCCCCEEEEEEEEEeCCcccCCEEEEEEeCC
Confidence 999999999999998632 222 3456787764
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=92.54 E-value=1.7 Score=40.62 Aligned_cols=84 Identities=11% Similarity=0.093 Sum_probs=50.3
Q ss_pred CceeEEEEecCCCCceEEEEEecCCC---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDGE---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
.|..+.+.-. ..+++.|.|...... .-.|+|...++...... .... .-....++
T Consensus 25 ~P~~l~~~~~-~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~----~~~~------------------~~~~~~~i 81 (203)
T 2gee_A 25 QPTDLSFVDI-TDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFE----DFVD------------------SSVGYYTV 81 (203)
T ss_dssp CCEEEEEECC-TTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEE----EEEE------------------TTCCEEEE
T ss_pred CCCccEEEec-CCCEEEEEecCCCCCCccEEEEEEEECCCCCCcee----EEcC------------------CCccEEEe
Confidence 5666655443 358999999876532 35677876654321111 0110 11236678
Q ss_pred cCCCCCcEEEEEEecC-CCCcceeEEEEcCC
Q 006938 177 KGLKKGVRYYYKVGSD-SKGWSETHSFVSRN 206 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~-~~~~S~~~~F~T~p 206 (625)
+||+|+|.|.++|..- +.+.|....+.+.+
T Consensus 82 ~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~ 112 (203)
T 2gee_A 82 TGLEPGIDYDISVYTVKNGGESTPTTLTQQT 112 (203)
T ss_dssp CSCCTTCEEEEEEEEESSSCBCCCEEEEEEC
T ss_pred CCCCCCCEEEEEEEEEeCCCccccEeeeecC
Confidence 9999999999999863 23456555555543
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.47 E-value=0.93 Score=38.45 Aligned_cols=81 Identities=14% Similarity=0.023 Sum_probs=48.3
Q ss_pred CceeEEEEecCCCCceEEEEEecC-C-C---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED-G-E---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~-~-~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
.|..+++.- ..++++.++|.... + . .-.|+|..... . .... .-...+
T Consensus 10 ~v~~l~v~~-~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~----~-----~~~~------------------~~~t~~ 61 (104)
T 2dle_A 10 QVFDVTAVN-ISATSLTLIWKVSDNESSSNYTYKIHVAGETD----S-----SNLN------------------VSEPRA 61 (104)
T ss_dssp BEEEEEEEE-ECSSCEEEEEEESCSTTCCSCEEEEEEECSSC----E-----EEEE------------------ESSSEE
T ss_pred CCceEEEEE-eecCEEEEEEcCCCCCCCceEEEEEEEECCCC----e-----EEEc------------------CCCCEE
Confidence 344445432 24689999998553 2 2 35677765421 0 0110 011467
Q ss_pred EEcCCCCCcEEEEEEecCCC---CcceeEEEEcCCCC
Q 006938 175 VIKGLKKGVRYYYKVGSDSK---GWSETHSFVSRNED 208 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~~---~~S~~~~F~T~p~~ 208 (625)
+|+||+|||.|.++|....+ .-+..-.+.|.|.+
T Consensus 62 ~i~gL~PgT~Y~~~V~A~~~~~~~~p~~~~~~T~p~p 98 (104)
T 2dle_A 62 VIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVP 98 (104)
T ss_dssp ECCSCCSSCEEEEEEEEESSSCCCBCEEEEEECCCCS
T ss_pred EECCCCCCCEEEEEEEEEECCcccCCeeEEEEccCCC
Confidence 89999999999999997432 22345567777643
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=92.47 E-value=0.4 Score=48.08 Aligned_cols=89 Identities=15% Similarity=0.138 Sum_probs=55.8
Q ss_pred CCCceeEEEEec-CCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 98 GTGPRAGALGFT-EDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 98 ~~~P~qv~L~~~-~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
...|..+++... ..++++.|.|..... ..-.|+|..........+ ...+ ..+-.
T Consensus 200 p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~-------~~~~-------------~~~~~ 259 (303)
T 1i1r_A 200 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQI-------PPED-------------TASTR 259 (303)
T ss_dssp CCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEEC-------CGGG-------------GCSCC
T ss_pred cCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEE-------cccc-------------CCCce
Confidence 456777777643 356899999986532 135688877653211111 0000 01112
Q ss_pred EEEEEcCCCCCcEEEEEEecCC-------CCcceeEEEEcCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS-------KGWSETHSFVSRN 206 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~-------~~~S~~~~F~T~p 206 (625)
...+|++|+|+|.|.+||.... +.||+...|+|+.
T Consensus 260 ~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 260 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 4677999999999999999631 2467888999865
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.36 E-value=0.22 Score=42.21 Aligned_cols=87 Identities=7% Similarity=0.017 Sum_probs=47.9
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
...|..+++.-. ..+++.|.|..... ..-.|+|......... ...... ....
T Consensus 16 P~~P~~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~------~~~~~~----------------~~~~ 72 (117)
T 1uem_A 16 PGPPSKPQVTDV-TKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSW------QTVANH----------------VKTT 72 (117)
T ss_dssp CBCCCCCEEEEE-CSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEE------EEEEEE----------------ECSS
T ss_pred ccCCCCCEEEEe-cCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCce------eEcccc----------------cCcC
Confidence 345666666533 35789999975431 1245777654311000 000000 0012
Q ss_pred EEEEcCCCCCcEEEEEEecCC-C---CcceeEE-EEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS-K---GWSETHS-FVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~-~---~~S~~~~-F~T~p~ 207 (625)
.+++++|+|++.|.|||..-. . .+|..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 567899999999999999642 1 3444333 666544
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=92.12 E-value=0.74 Score=38.23 Aligned_cols=70 Identities=17% Similarity=0.156 Sum_probs=42.8
Q ss_pred CceeEEEEecCCCCceEEEEEecCC-C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG-E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~-~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+++.- -.++++.|+|..... . .-.|+|......... ...... +-.-.++|+
T Consensus 4 ~P~~l~v~~-~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~----~~~~~~------------------~~~t~~~l~ 60 (98)
T 3tes_A 4 APKNLVVSE-VTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEA----INLTVP------------------GSERSYDLT 60 (98)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCTTSCSEEEEEEEETTBCSCC----EEEEEE------------------TTCSEEEEC
T ss_pred CCCceEEEe-cCCCeEEEEecCCcCccceEEEEEEECCCCCce----EEEEcC------------------CCcCEEEEC
Confidence 366666642 246899999986543 2 346888765421111 011111 112367899
Q ss_pred CCCCCcEEEEEEecC
Q 006938 178 GLKKGVRYYYKVGSD 192 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~ 192 (625)
||+|+|.|.++|..-
T Consensus 61 gL~P~t~Y~~~V~A~ 75 (98)
T 3tes_A 61 GLKPGTEYTVSIYGV 75 (98)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred CCCCCCEEEEEEEEE
Confidence 999999999999864
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.01 E-value=0.66 Score=39.68 Aligned_cols=74 Identities=20% Similarity=0.302 Sum_probs=44.1
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecCC-----CceEEEEEccCC-CCCcEEEeeEEEEeeccccCCCCCCcccccCCce
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEKKD-QMGHVAVASVERYERGQMCDKPANSSIGWRDPGW 170 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~~~-~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~ 170 (625)
-...|..+.+.-. ..+++.|.|..... ..-.|+|..... ...... .. .. .+.
T Consensus 17 ~P~~P~~~~~~~~-~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~-~~--~~------------------~~~ 74 (121)
T 1x4z_A 17 PPEAPDRPTISTA-SETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILA-TS--AI------------------PPS 74 (121)
T ss_dssp CCCCCCCCEEEEC-CSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEE-EE--EE------------------CTT
T ss_pred CCccCCCCEEEEc-cCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEe-ec--cc------------------CCC
Confidence 3455777666543 35799999984321 235688877541 111111 00 00 011
Q ss_pred EEEEEEcCCCCCcEEEEEEecC
Q 006938 171 IFDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
...+++++|+|++.|.|||..-
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~ 96 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRAL 96 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEE
Confidence 2466789999999999999963
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.89 E-value=0.95 Score=39.06 Aligned_cols=87 Identities=14% Similarity=0.039 Sum_probs=52.4
Q ss_pred CceeEEEEecCCCCceEEEEEec--CC--C---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAE--DG--E---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~--~~--~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
.|..+++... ..+++.|.|... .. . .-.|+|.......... .... . ..+...
T Consensus 21 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~-----~~~~-----------~----~~~~~~ 79 (134)
T 2edx_A 21 PPQKVMCVSM-GSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGR-----HVVD-----------G----ISREHS 79 (134)
T ss_dssp CSEEEEEECS-SSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCC-----EEEC-----------C----CBTTCS
T ss_pred CCcccEEEeC-CCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCccc-----EEEE-----------e----eCCCcc
Confidence 4667766543 357999999866 21 1 2346665544321100 0000 0 011235
Q ss_pred EEEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~ 207 (625)
.++|+||+|+|.|.+||..- .+.+|....++|.+.
T Consensus 80 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 80 SWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp EEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 67899999999999999863 246788888988754
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=91.84 E-value=0.49 Score=44.54 Aligned_cols=90 Identities=14% Similarity=0.142 Sum_probs=54.9
Q ss_pred CCCceeEEEEec-CCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 98 GTGPRAGALGFT-EDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 98 ~~~P~qv~L~~~-~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
...|..+++... ..++++.|.|..... ..-.|+|....+...... ...+ ..+..
T Consensus 104 p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~-------~~~~-------------~~~~~ 163 (215)
T 1bqu_A 104 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQI-------PPED-------------TASTR 163 (215)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEEC-------CGGG-------------GCSCC
T ss_pred CCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEe-------cccc-------------ccCcc
Confidence 456777777654 256899999985432 135677776543211110 0000 01122
Q ss_pred EEEEEcCCCCCcEEEEEEecC----CC---CcceeEEEEcCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD----SK---GWSETHSFVSRNE 207 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~----~~---~~S~~~~F~T~p~ 207 (625)
..++|++|+|+|.|.+||... .+ .||+...++|.+.
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 164 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp SEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred ceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 467799999999999999863 12 3677888888753
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.82 E-value=1.3 Score=38.05 Aligned_cols=71 Identities=13% Similarity=0.157 Sum_probs=36.7
Q ss_pred CCCceEEEEEecC-CCc----eEEEEEccC-CCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcE
Q 006938 111 DASEMRVMFLAED-GEK----RYVKYGEKK-DQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVR 184 (625)
Q Consensus 111 ~~~~~~V~W~T~~-~~~----~~V~yg~~~-~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~ 184 (625)
..+++++.|.... ... -.|+|...+ +.....+ .....+..... . ...+-...++++||+|+|.
T Consensus 15 ~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~-~~~~~~~~~~~------~----~~~~~~~~~~v~~L~p~t~ 83 (115)
T 2ic2_A 15 SDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTT-NDNIPYGKPKW------N----SELGKSFTASVTDLKPQHT 83 (115)
T ss_dssp C---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEE-EEEEECCSCSC------S----SSSEEEEEEEECSCCSSEE
T ss_pred eCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceEC-ccccccccccc------c----cccCceeEEEeCCCCCCCE
Confidence 4689999998643 222 357776652 1112221 22222210000 0 0123345788999999999
Q ss_pred EEEEEecC
Q 006938 185 YYYKVGSD 192 (625)
Q Consensus 185 Y~YrV~~~ 192 (625)
|.+||..-
T Consensus 84 Y~FRV~A~ 91 (115)
T 2ic2_A 84 YRFRILAV 91 (115)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999963
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.47 E-value=0.46 Score=39.87 Aligned_cols=71 Identities=14% Similarity=0.096 Sum_probs=41.6
Q ss_pred CCceeEEEEecCCCCceEEEEEecC--CC----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED--GE----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~--~~----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
..|..+.+.-. ..+++.+.|.... .. .-.|+|......... ... . ......
T Consensus 9 ~~P~~l~~~~~-~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~-------~~~------~---------~~~~~~ 65 (110)
T 2yuw_A 9 SPPTLLTVDSV-TDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWI-------VAN------K---------DLIDKT 65 (110)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEE-------ECC------S---------SCCCSS
T ss_pred CCCCccEEEec-cCCeEEEEECCCCCCCCCCccEEEEEEEECCCccce-------Eec------c---------ccCccC
Confidence 45766666533 3579999998643 11 234666654321110 000 0 001123
Q ss_pred EEEEcCCCCCcEEEEEEecC
Q 006938 173 DAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~ 192 (625)
..++++|+|++.|.|||..-
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~ 85 (110)
T 2yuw_A 66 KFTITGLPTDAKIFVRVKAV 85 (110)
T ss_dssp EEEECSCCTTCEEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEEE
Confidence 56789999999999999973
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.38 E-value=1.1 Score=38.27 Aligned_cols=84 Identities=18% Similarity=0.177 Sum_probs=50.6
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
..|..+++.-- +++++.|+|..... ..-.|+|....+...... .. ++-...++|
T Consensus 9 ~pP~~l~~~~v-t~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~-----~v------------------~~~~t~~~l 64 (108)
T 2ee3_A 9 APPRHLGFSDV-SHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQT-----EA------------------PGNATSAML 64 (108)
T ss_dssp CCSSCEEEESC-CSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCE-----EE------------------ETTCCEEEE
T ss_pred CCCceEEEEEc-cCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEE-----Ec------------------CCCcCEEEc
Confidence 45777777533 46899999975432 235688876543211100 00 011236789
Q ss_pred cCCCCCcEEEEEEecC-CCCcce--eEEEEcCC
Q 006938 177 KGLKKGVRYYYKVGSD-SKGWSE--THSFVSRN 206 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~-~~~~S~--~~~F~T~p 206 (625)
+||+|+|.|..+|..- +.+.|+ ...|+|.+
T Consensus 65 ~~L~p~T~Y~v~V~A~~~~g~s~p~~~~~~T~~ 97 (108)
T 2ee3_A 65 GPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKK 97 (108)
T ss_dssp CSCCSSCEEEEEEEEECTTSCEEEEEEEEECCC
T ss_pred CCCCCCCEEEEEEEEEeCCCcCCCccCEEEeCC
Confidence 9999999999999863 223332 33688863
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.35 E-value=0.98 Score=37.76 Aligned_cols=86 Identities=16% Similarity=0.124 Sum_probs=49.0
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC-CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG-EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~-~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
..|..+++.-.. ++++.++|.-... ..-.|+|........... .... ..+. .++|+
T Consensus 10 ~~P~~l~~~~~~-~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~--~~~~------------------~~~~--~~~l~ 66 (104)
T 2dkm_A 10 PPPRALTLAAVT-PRTVHLTWQPSAGATHYLVRCSPASPKGEEEE--REVQ------------------VGRP--EVLLD 66 (104)
T ss_dssp CCCCCCEEEEEC-SSEEEEECCCCSSCSEEEEEEEESSSCCSSCC--EEEE------------------ESSS--EEEEE
T ss_pred CCCceeEEEecC-CCEEEEEEeCCCCCCeEEEEEEECCCCCCcce--EEEe------------------cCCC--EEEEC
Confidence 457777765443 5899999965432 234577765442111000 0000 0112 78899
Q ss_pred CCCCCcEEEEEEecCC-CCcce--eEEEEcCCC
Q 006938 178 GLKKGVRYYYKVGSDS-KGWSE--THSFVSRNE 207 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~~-~~~S~--~~~F~T~p~ 207 (625)
||+|+|.|.++|..-. .+.|. ...++|.|.
T Consensus 67 ~L~p~t~Y~~~V~A~~~~~~s~p~~~~~~T~p~ 99 (104)
T 2dkm_A 67 GLEPGRDYEVSVQSLRGPEGSEARGIRARTPTS 99 (104)
T ss_dssp SCCTTCCEEEEEEEECSSSBCCCEEEECCCCCC
T ss_pred CCCCCCEEEEEEEEECCCCCCCCEEEEEEcCCC
Confidence 9999999999999642 23332 344666643
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.08 E-value=0.39 Score=41.64 Aligned_cols=85 Identities=14% Similarity=0.246 Sum_probs=51.9
Q ss_pred CceeEEEEecCCCCceEEEEEecCC---C----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG---E----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~---~----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
.|..+++... ..+++.|.|..... . .-.|+|...... . ..... . ..+...
T Consensus 21 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~------~--~~~~~----------~----~~~~~~ 77 (132)
T 1x5h_A 21 APQNLSLEVR-NSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------S--DVTET----------L----VSGTQL 77 (132)
T ss_dssp CCEEEEEECC-SSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------E--EEECC----------B----CCTTCC
T ss_pred CCeeeEEEeC-CCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC------C--ccEEE----------E----eCCCcc
Confidence 4666766432 46899999986643 1 133555543310 0 00000 0 012235
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
.++|+||+|+|.|.+||..-. +.||+...|+|.+.
T Consensus 78 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 78 SQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp EEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 677999999999999998632 35788889999764
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=90.96 E-value=0.79 Score=46.13 Aligned_cols=88 Identities=10% Similarity=0.103 Sum_probs=54.8
Q ss_pred CCCceeEEEEecC-----CCCceEEEEEecCC-----CceEEEEE-ccCCCCCcEEEeeEEEEeeccccCCCCCCccccc
Q 006938 98 GTGPRAGALGFTE-----DASEMRVMFLAEDG-----EKRYVKYG-EKKDQMGHVAVASVERYERGQMCDKPANSSIGWR 166 (625)
Q Consensus 98 ~~~P~qv~L~~~~-----~~~~~~V~W~T~~~-----~~~~V~yg-~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~ 166 (625)
...|..+++.... .++++.|.|..... ..-.|+|. ..++.....+. ..
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~----~~----------------- 261 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVG----PL----------------- 261 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEE----EE-----------------
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcc----cc-----------------
Confidence 4567666655432 46899999986531 24678888 44332222110 00
Q ss_pred CCceEEEEEEcCCCCCcEEEEEEecC----CC---CcceeEEEEcCCC
Q 006938 167 DPGWIFDAVIKGLKKGVRYYYKVGSD----SK---GWSETHSFVSRNE 207 (625)
Q Consensus 167 ~~~~~h~a~ltgL~PgT~Y~YrV~~~----~~---~~S~~~~F~T~p~ 207 (625)
....+.++|++|+|+|.|..||... .+ .||+...|+|+..
T Consensus 262 -~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 262 -PLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp -CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred -cCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 1123677899999999999999953 23 3778888988753
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=90.90 E-value=0.64 Score=43.65 Aligned_cols=88 Identities=17% Similarity=0.176 Sum_probs=54.1
Q ss_pred CceeEEEEecC-CCCceEEEEEecCC----C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 100 GPRAGALGFTE-DASEMRVMFLAEDG----E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 100 ~P~qv~L~~~~-~~~~~~V~W~T~~~----~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
.|..+++...+ ..+++.|.|..... . .-.|+|........... ...... +-...
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~~------------------~~~~~ 167 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDW--VIEPVV------------------GNRLT 167 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGS--EEEEEE------------------SSCSE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCce--EEEEec------------------CCeeE
Confidence 67788887765 36899999986431 1 24577776543211100 000111 11236
Q ss_pred EEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCCC
Q 006938 174 AVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRNE 207 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~ 207 (625)
++|+||+|++.|.++|..- .+.+|+...|+|...
T Consensus 168 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~~ 205 (211)
T 3p4l_A 168 HQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKA 205 (211)
T ss_dssp EEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC--
T ss_pred EEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCccc
Confidence 7799999999999999863 246778888877543
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=90.86 E-value=1.8 Score=39.62 Aligned_cols=91 Identities=9% Similarity=0.064 Sum_probs=54.0
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
...|..+++.-. .++++.|.|..... ..-.|+|...... ....... +....++
T Consensus 7 p~~P~~l~~~~~-~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~------~~~~~~~------------------~~~~~~~ 61 (186)
T 1qr4_A 7 LDNPKDLEVSDP-TETTLSLRWRRPVAKFDRYRLTYVSPSGK------KNEMEIP------------------VDSTSFI 61 (186)
T ss_dssp -CCCEEEEEESC-CSSEEEEEEECCSSCCSEEEEEEECTTCC------EEEEEEC------------------TTCSEEE
T ss_pred CcCCCceEEEec-CCCEEEEEEeCCCCCccEEEEEEEeCCCC------eeEEECC------------------CCCCEEE
Confidence 456887777543 36899999986542 2356777743221 0111110 1113567
Q ss_pred EcCCCCCcEEEEEEecCC-CCcce--eEEEEcCCCCCCcce
Q 006938 176 IKGLKKGVRYYYKVGSDS-KGWSE--THSFVSRNEDSNETI 213 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~~-~~~S~--~~~F~T~p~~~~~~~ 213 (625)
++||+|+|.|.++|.... .+.|. ...++|.|.....++
T Consensus 62 i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~P~~l~ 102 (186)
T 1qr4_A 62 LRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGSPKGIS 102 (186)
T ss_dssp EESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCCCSCEE
T ss_pred ECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCCCCccE
Confidence 899999999999999743 33443 556777765544443
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=90.81 E-value=1.3 Score=40.64 Aligned_cols=87 Identities=14% Similarity=0.046 Sum_probs=50.5
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
....|..+++.-. ..+++.|.|..... ..-.|+|......... ..... +....+
T Consensus 94 ~p~~P~~l~~~~~-~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~-----~~~~~------------------~~~~~~ 149 (186)
T 1qr4_A 94 VVGSPKGISFSDI-TENSATVSWTPPRSRVDSYRVSYVPITGGTPN-----VVTVD------------------GSKTRT 149 (186)
T ss_dssp CCCCCSCEEEESC-CSSCEEEEECCCSSCCSEEEEEEEETTCCCCE-----EEEEE------------------TTCCEE
T ss_pred CCCCCCccEEEEe-CCCEEEEEEECCCCcccEEEEEEEeCCCCCce-----EEEcC------------------CCcCEE
Confidence 3556777766432 45899999975432 2356778765432111 11111 112467
Q ss_pred EEcCCCCCcEEEEEEecCC-CCcc--eeEEEEcCCC
Q 006938 175 VIKGLKKGVRYYYKVGSDS-KGWS--ETHSFVSRNE 207 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~-~~~S--~~~~F~T~p~ 207 (625)
+|+||+|++.|.++|.... .+.| ....|+|.|.
T Consensus 150 ~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 150 KLVKLVPGVDYNVNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp EECSCCSSCEEEEEEEEEETTEECCCEEEEEEC---
T ss_pred EEcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecCC
Confidence 7999999999999998632 2333 3456777653
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.11 E-value=1.6 Score=37.89 Aligned_cols=72 Identities=21% Similarity=0.146 Sum_probs=45.7
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
...|..+++.-. +.+++.|.|..... ..-.|+|.......... ..... +-...++
T Consensus 29 ~~~P~~l~v~~~-t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~----~~~v~------------------~~~t~~~ 85 (121)
T 2ocf_D 29 SDVPTKLEVVAA-TPTSLLISWDAPAVTVRYYRITYGETGGNSPVQ----EFTVP------------------GSKSTAT 85 (121)
T ss_dssp CCSCEEEEEEEE-CSSCEEEEEECCSSCCCEEEEEEEETTTCSCBE----EEEEE------------------TTCCEEE
T ss_pred CCCCCccEEEec-CCCEEEEEEcCCCCCCcEEEEEEEECCCCCccE----EEEeC------------------CCcCEEE
Confidence 456888887653 46899999976542 23467787654321100 01110 1124678
Q ss_pred EcCCCCCcEEEEEEecC
Q 006938 176 IKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~ 192 (625)
|+||+|+|.|.++|..-
T Consensus 86 l~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 86 ISGLKPGVDYTITVYAV 102 (121)
T ss_dssp ECCCCTTCEEEEEEEEE
T ss_pred eCCCCCCCEEEEEEEEE
Confidence 99999999999999874
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.99 E-value=0.24 Score=43.47 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=28.4
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
.++++||+|+|+|.+||...+ +.+|+...++|.+.
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence 467999999999999999743 24678888998764
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=89.96 E-value=1.8 Score=41.31 Aligned_cols=84 Identities=15% Similarity=0.125 Sum_probs=53.6
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
..|..+.+... ..+++.|.|..... ..-.|+|....+...... ... .....++|
T Consensus 7 ~~P~~l~~~~~-~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~-----~~~------------------~~~~~~~i 62 (234)
T 3f7q_A 7 GAPQNPNAKAA-GSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAH-----LLD------------------SKVPSVEL 62 (234)
T ss_dssp CCCEEEEEEEC-SSSCEEEEEECCSSCCCEEEEEEEETTSCGGGCE-----EEE------------------ESSSEEEE
T ss_pred CCCcceEEEEc-CCCEEEEEEECCCCccceEEEEEEECCCCccceE-----EEc------------------CCccEEEE
Confidence 45888877654 35789999986532 234677876543211100 000 01135779
Q ss_pred cCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 177 KGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
+||+|+|.|.++|..-. +.+|....++|..
T Consensus 63 ~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 63 TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCC
Confidence 99999999999998532 3467788898874
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.94 E-value=0.76 Score=44.31 Aligned_cols=92 Identities=12% Similarity=0.188 Sum_probs=57.0
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecCC----------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCccccc
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAEDG----------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWR 166 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~~----------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~ 166 (625)
-...|..+.+.. .+.+.|.|..... ..-.|+|....+.+....... ...
T Consensus 100 kp~PP~nltv~~---~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~~W~~~~~~~--~~~---------------- 158 (219)
T 3tgx_A 100 KPAPPFDVTVTF---SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGDPWAVSPRRK--LIS---------------- 158 (219)
T ss_dssp CCCCCEEEEEEE---SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTSCTTSCCEEE--EEC----------------
T ss_pred EeCCCCceEEEe---CCCEEEEEeCCcCCccccccccCEEEEEEEecCCCCceecccce--eEe----------------
Confidence 456688777762 4689999987532 246788887765332210000 110
Q ss_pred CCceEEEEEEcCCCCCcEEEEEEecC---C----C---CcceeEEEEcCCCCC
Q 006938 167 DPGWIFDAVIKGLKKGVRYYYKVGSD---S----K---GWSETHSFVSRNEDS 209 (625)
Q Consensus 167 ~~~~~h~a~ltgL~PgT~Y~YrV~~~---~----~---~~S~~~~F~T~p~~~ 209 (625)
..+....+.+.+|.||+.|..||... + + .||+...|.|++..-
T Consensus 159 ~~~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~~ 211 (219)
T 3tgx_A 159 VDSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEEL 211 (219)
T ss_dssp SSCSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC---
T ss_pred cCCCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchhh
Confidence 01234566788999999999999852 1 2 468899999987643
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=89.94 E-value=0.77 Score=45.23 Aligned_cols=35 Identities=9% Similarity=0.164 Sum_probs=28.2
Q ss_pred EEEEEcCCCCCcEEEEEEecCC---CCcceeEEEEcCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS---KGWSETHSFVSRN 206 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~---~~~S~~~~F~T~p 206 (625)
...+|+||+|||.|.++|..-. +.+|+...|+|++
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 3667999999999999998532 3478889999875
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.92 E-value=0.76 Score=39.03 Aligned_cols=36 Identities=14% Similarity=0.234 Sum_probs=24.8
Q ss_pred EEEEEcCCCCCcEEEEEEecCC-C---CcceeE-EEEcCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS-K---GWSETH-SFVSRNE 207 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~-~---~~S~~~-~F~T~p~ 207 (625)
..++++||+|++.|.|||..-. . .+|..- .++|.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 76 TSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred cEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 4577999999999999999632 1 344443 4666543
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.84 E-value=0.19 Score=45.31 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=30.3
Q ss_pred EEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
..++|+||+|+|.|..||..-. +.+|+...|+|.+..
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~ 122 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCC
Confidence 4778999999999999998632 457888899998654
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=89.63 E-value=0.95 Score=50.07 Aligned_cols=86 Identities=19% Similarity=0.170 Sum_probs=53.1
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
...|..+.+ ....++++.|+|..... ..-.|+|...... .. ..... +-..
T Consensus 441 ~~~Ps~~~~-~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~-~~-----~~~v~------------------~~~t 495 (536)
T 3fl7_A 441 QTEPPKVRL-EGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDS-NS-----YNVRR------------------TEGF 495 (536)
T ss_dssp SCCCCEEEE-EECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--C-CC-----CEEEE------------------ESSS
T ss_pred ccCCCCCce-eeccCCeEEEEEECCcCCCCcccEEEEEEEECCCC-ce-----EEEEc------------------CCCC
Confidence 345777766 33446899999986531 1356888766532 10 00111 0113
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
.++|+||+|+|.|.+||..-. +.+|+...|+|.+..
T Consensus 496 s~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~~ 535 (536)
T 3fl7_A 496 SVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPE 535 (536)
T ss_dssp EEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC--
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCCC
Confidence 677999999999999998632 458899999998753
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.59 E-value=1 Score=37.86 Aligned_cols=72 Identities=17% Similarity=0.182 Sum_probs=42.5
Q ss_pred CCCceeEEEEecCCCCceEEEEEecC--C---C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAED--G---E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~--~---~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
...|..+.+.-. ..+++.+.|.... . . .-.|+|.......... |.. .+.-.
T Consensus 9 P~~P~~l~~~~~-~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~-------------~~~---------~~~~~ 65 (111)
T 1x5y_A 9 TSAPQHLTVEDV-TDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVP-------------ANK---------EPVER 65 (111)
T ss_dssp CCCCEEEEEEEE-CSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEE-------------SSS---------SCBSS
T ss_pred CcCCCCCEEEec-cCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEE-------------ccc---------cCCcc
Confidence 345777766543 3579999998543 1 1 2457776544321110 000 00112
Q ss_pred EEEEEcCCCCCcEEEEEEecC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
..+++++|+|++.|.|||..-
T Consensus 66 ~~~~v~~L~p~t~Y~frV~A~ 86 (111)
T 1x5y_A 66 CGFTVKDLPTGARILFRVVGV 86 (111)
T ss_dssp SEEEEECCCTTCCEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEE
Confidence 356789999999999999963
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.57 E-value=1.2 Score=38.45 Aligned_cols=90 Identities=7% Similarity=-0.020 Sum_probs=50.9
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC-----CceEEEEEcc---CCCCCcEEEeeEEEEeeccccCCCCCCcccccCCc
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEK---KDQMGHVAVASVERYERGQMCDKPANSSIGWRDPG 169 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~---~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~ 169 (625)
+..|..+.+.- -..+++.+.|.-... ..-.|+|... .......+ . .... ..
T Consensus 18 P~~P~~l~~~~-~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~-~---~~~~----------------~~ 76 (124)
T 1wis_A 18 PGPPTNLGISN-IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI-H---QLSN----------------EP 76 (124)
T ss_dssp CCCCEEEEEES-CCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEE-E---EEES----------------CT
T ss_pred CccCCCCEEEE-ecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEe-e---eEcc----------------CC
Confidence 45577776643 246899999964431 1356778663 21111111 0 0000 01
Q ss_pred eEEEEEEcCCCCCcEEEEEEecCC----CCccee-EEEEcCCCC
Q 006938 170 WIFDAVIKGLKKGVRYYYKVGSDS----KGWSET-HSFVSRNED 208 (625)
Q Consensus 170 ~~h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~-~~F~T~p~~ 208 (625)
....+++++|+|+|.|.+||..-. +.+|.. ..++|.+..
T Consensus 77 ~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 77 DARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp TCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred CceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 123677999999999999999642 234543 457776543
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.47 E-value=2.6 Score=34.05 Aligned_cols=70 Identities=21% Similarity=0.301 Sum_probs=42.0
Q ss_pred CceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+++.-- ..+++.|+|.-... ..-.|+|....+. ...... . ..+-...++|+
T Consensus 4 ~P~~l~~~~~-~~~si~lsW~~p~~~i~~Y~v~y~~~~~~-------~~~~~~------~---------~~~~~~~~~l~ 60 (94)
T 1j8k_A 4 RPKGLAFTDV-DVDSIKIAWESPQGQVSRYRVTYSSPEDG-------IHELFP------A---------PDGEEDTAELQ 60 (94)
T ss_dssp CCCCCEEEEE-ETTEEEEECCCCSSCCSCEEEEEEETTTE-------EEEECC------C---------CCSSCCEEEEC
T ss_pred CCCccEEEee-cCCEEEEEEcCCCCCcceEEEEEEeCCCC-------CceEEe------c---------CCCCccEEEeC
Confidence 3666666543 25789999965432 2356778665421 000000 0 01123577899
Q ss_pred CCCCCcEEEEEEecC
Q 006938 178 GLKKGVRYYYKVGSD 192 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~ 192 (625)
||+|||.|.++|..-
T Consensus 61 ~L~p~t~Y~~~V~A~ 75 (94)
T 1j8k_A 61 GLRPGSEYTVSVVAL 75 (94)
T ss_dssp SCCCCSEEEEEEEEC
T ss_pred CCCCCCEEEEEEEEE
Confidence 999999999999974
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=89.46 E-value=1.8 Score=37.15 Aligned_cols=72 Identities=22% Similarity=0.249 Sum_probs=45.2
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
+..|..+++.-. .++++.|+|..... ..-.|+|....+.... ...... +-...++
T Consensus 4 P~~P~~L~v~~~-t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~----~~~~v~------------------~~~ts~~ 60 (114)
T 3qwq_B 4 SDVPRDLEVVAA-TPTSLLISWDSGRGSYQYYRITYGETGGNSPV----QEFTVP------------------GPVHTAT 60 (114)
T ss_dssp -CCCEEEEEEEE-ETTEEEEEEECCSCCCSEEEEEEEESSCSSCC----EEEEEE------------------TTCCEEE
T ss_pred CCCCCceEEEec-CCCEEEEEEcCCcCcccEEEEEEEECCCCCcc----EEEEeC------------------CCcCEEE
Confidence 345777777543 35899999987542 2356888776532100 011111 1124678
Q ss_pred EcCCCCCcEEEEEEecC
Q 006938 176 IKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~ 192 (625)
|+||+|+|.|..+|..-
T Consensus 61 l~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 61 ISGLKPGVDYTITVYAV 77 (114)
T ss_dssp ECSCCTTCEEEEEEEEE
T ss_pred eCCCCCCCEEEEEEEEE
Confidence 99999999999999863
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=89.33 E-value=3 Score=41.02 Aligned_cols=95 Identities=11% Similarity=0.041 Sum_probs=55.5
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
....|..+++.-. ..+++.|.|..... ..-.|+|.......... .... .....+
T Consensus 112 ~~~~P~~l~~~~~-~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~-----~~~~------------------~~~~~~ 167 (290)
T 3r8q_A 112 NVSPPRRARVTDA-TETTITISWRTKTETITGFQVDAVPANGQTPIQ-----RTIK------------------PDVRSY 167 (290)
T ss_dssp CCCCCEEEEEEEE-CSSCEEEEEECCSCCCCEEEEEEEESSSCCCEE-----EEEC------------------TTCSEE
T ss_pred CCCCCceeEEEEc-CCCeEEEEEeCCCCcccEEEEEEEECCCCcceE-----EecC------------------CCccEE
Confidence 3456777777643 46899999987643 23567776654321110 1110 112356
Q ss_pred EEcCCCCCcEEEEEEecCC-CCcc--eeEEEEcCCCCCCcceEE
Q 006938 175 VIKGLKKGVRYYYKVGSDS-KGWS--ETHSFVSRNEDSNETIAF 215 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~-~~~S--~~~~F~T~p~~~~~~~f~ 215 (625)
+|+||+|++.|.++|..-. .+.| ....+.|.|.....+++.
T Consensus 168 ~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~P~~l~~~ 211 (290)
T 3r8q_A 168 TITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRFL 211 (290)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEE
T ss_pred EECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCCCCccEEE
Confidence 7999999999999998632 2333 344566666544334443
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=89.29 E-value=1.6 Score=40.68 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=27.5
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
..+|+||+|+|.|.|||..-. +.+|+...++|..
T Consensus 175 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 175 SFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 567899999999999998632 4578888888864
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=89.27 E-value=1.1 Score=42.06 Aligned_cols=83 Identities=19% Similarity=0.061 Sum_probs=47.5
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
..|..+++.-. +++++.++|..... ..-.|+|.+........ ..... +-...++|
T Consensus 105 ~~P~~l~v~~~-t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~----~~~v~------------------~~~t~~~l 161 (195)
T 2qbw_A 105 SVPTNLEVVAA-TPTSLLISWDASYYGVSYYRITYGETGGNSPVQ----EFTVP------------------YSSSTATI 161 (195)
T ss_dssp CSSCCCEEEEE-ETTEEEEECCCCCSSCSEEEEEEEETTCCSCCE----EEEEE------------------TTCSEEEE
T ss_pred CCCcccEEEeC-CCCEEEEEEeCCCCCccEEEEEEEECCCCCcce----EEEeC------------------CCCCEEEe
Confidence 34665555433 36789999965542 23467786654321010 01111 11246789
Q ss_pred cCCCCCcEEEEEEecCC----CCcceeEEEEc
Q 006938 177 KGLKKGVRYYYKVGSDS----KGWSETHSFVS 204 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~~----~~~S~~~~F~T 204 (625)
+||+|+|+|.++|..-. +..|+...|++
T Consensus 162 ~gL~p~t~Y~~~V~A~~~~G~g~~S~~v~~~~ 193 (195)
T 2qbw_A 162 SGLKPGVDYTITVYAYSDYYGSHHYSPISINY 193 (195)
T ss_dssp CSCCTTCEEEEEEEEESSTTSSCBCCCEEEEE
T ss_pred CCCCCCCEEEEEEEEEeCCccCCCCCCEEEEe
Confidence 99999999999999632 23455544443
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.00 E-value=2.4 Score=38.60 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=44.1
Q ss_pred CCCceeEEEEecCCCCceEEEEEecC--C---C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAED--G---E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~--~---~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
+..|..+++.-. ..+++.+.|.... . . .-.|+|............. . ...
T Consensus 6 P~~P~~l~~~~~-~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~------------------~~~ 61 (197)
T 3lpw_A 6 PGPPQDLKVKEV-TKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVAT-----N------------------CHK 61 (197)
T ss_dssp CCCCEEEEEEEE-CSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEE-----E------------------ECS
T ss_pred CCCCCCcEEEEe-cCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeec-----C------------------CCc
Confidence 456777776533 3589999998653 1 2 3467777654322211100 0 011
Q ss_pred EEEEEcCCCCCcEEEEEEecC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
...++++|+|+|.|.|||..-
T Consensus 62 ~~~~~~~L~p~t~Y~~~V~a~ 82 (197)
T 3lpw_A 62 TSWKVDQLQEGCSYYFRVLAE 82 (197)
T ss_dssp SEEEECCCCTTCEEEEEEEEE
T ss_pred cEEEEcCCCCCCEEEEEEEEE
Confidence 356799999999999999863
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=88.85 E-value=3.1 Score=35.62 Aligned_cols=89 Identities=13% Similarity=0.093 Sum_probs=49.5
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecCC-C----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAEDG-E----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~~-~----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
-+..|..+.+.-. ..+++.+.|..... . .-.|+|.........-. ....... . ..
T Consensus 16 ~P~~P~~~~~~~~-~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~--~~~~~~~----------------~-~~ 75 (127)
T 1uey_A 16 VPNPPFDLELTDQ-LDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH--HQTEVSG----------------T-QT 75 (127)
T ss_dssp SCCCCEEEEEECC-SSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEE--EEEEEES----------------S-CC
T ss_pred CCcCCCCcEEEEc-cCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccE--EEeeeCC----------------C-ce
Confidence 3456777776543 46899999985432 1 24567765432111000 0001100 0 11
Q ss_pred EEEEEcCCCCCcEEEEEEecCC----CCccee-EEEEcCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS----KGWSET-HSFVSRNE 207 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~-~~F~T~p~ 207 (625)
+ .+.+|+|+|.|.|||..-. +.+|.. ..|+|.+.
T Consensus 76 ~--~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 76 T--AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp E--EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred E--EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 2 3669999999999999632 345655 47887653
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=88.62 E-value=1.6 Score=44.32 Aligned_cols=84 Identities=11% Similarity=0.115 Sum_probs=52.7
Q ss_pred CCCceeEEEEecC-CCCceEEEEEecCC-------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCc
Q 006938 98 GTGPRAGALGFTE-DASEMRVMFLAEDG-------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPG 169 (625)
Q Consensus 98 ~~~P~qv~L~~~~-~~~~~~V~W~T~~~-------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~ 169 (625)
...|..+++.... +++++.|+|..... ..-.|+|..........+. .. .
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~-----~~------------------~ 253 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWM-----VK------------------D 253 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEE-----CG------------------G
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEc-----cc------------------C
Confidence 4568888887754 45899999986542 2356888776532222110 00 0
Q ss_pred eEEEEEEcCCCCCcEEEEEEecCC----C---CcceeEEEEc
Q 006938 170 WIFDAVIKGLKKGVRYYYKVGSDS----K---GWSETHSFVS 204 (625)
Q Consensus 170 ~~h~a~ltgL~PgT~Y~YrV~~~~----~---~~S~~~~F~T 204 (625)
....++|++|+|++.|..||.... + .||+...++|
T Consensus 254 ~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 254 LQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp GCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 113567999999999999999642 2 4556555554
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.61 E-value=0.67 Score=39.73 Aligned_cols=73 Identities=18% Similarity=0.170 Sum_probs=43.7
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecC--C----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCce
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAED--G----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGW 170 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~--~----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~ 170 (625)
.+..|..+.+.-. ..+++.+.|.... . ..-.|+|..........+ . . ...
T Consensus 17 ~P~~P~~l~~~~~-~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~-~-----~-----------------~~~ 72 (120)
T 2yux_A 17 RPGPPQIVKIEDV-WGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTV-I-----E-----------------HYH 72 (120)
T ss_dssp CCCCCSCEEEEEE-ETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEE-E-----S-----------------SCC
T ss_pred CCCcCCCCEEEEe-cCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEe-e-----e-----------------cCC
Confidence 3456777766532 3579999997543 1 124577776543222111 0 0 001
Q ss_pred EEEEEEcCCCCCcEEEEEEecCC
Q 006938 171 IFDAVIKGLKKGVRYYYKVGSDS 193 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~~~ 193 (625)
...+++++|+|++.|.|||....
T Consensus 73 ~~~~~v~~L~p~t~Y~frV~A~n 95 (120)
T 2yux_A 73 RTSATITELVIGNEYYFRVFSEN 95 (120)
T ss_dssp SSCCEECCCCSSEEEEEEECCCS
T ss_pred cCEEEECCCCCCCEEEEEEEEee
Confidence 12456899999999999999743
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=88.58 E-value=2.1 Score=39.84 Aligned_cols=83 Identities=17% Similarity=0.197 Sum_probs=47.4
Q ss_pred CCCceeEEEEecCCCCceEEEEEecC--C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAED--G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~--~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
+..|..+.+. ....+++.|.|.... + ..-.|+|....+..... ... ++...
T Consensus 110 P~~P~~~~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~------------------~~~~~ 165 (209)
T 2vkw_A 110 PSAPKLEGQM-GEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPE-----IRL------------------PSGSD 165 (209)
T ss_dssp CCCCEEEEEE-CTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCC-----EEE------------------CTTCC
T ss_pred CCCCcccccc-cccCCeEEEEEECcccCCCCCceEEEEEECCCCCCcee-----eec------------------CCCcc
Confidence 4456654432 234689999998753 1 13457787632221110 011 11123
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEc
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVS 204 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T 204 (625)
.++|+||+|+|.|.+||..-. +.+|+...+++
T Consensus 166 ~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~ 201 (209)
T 2vkw_A 166 HVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 201 (209)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhhh
Confidence 567999999999999998632 24555555543
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=88.44 E-value=1.7 Score=36.03 Aligned_cols=70 Identities=19% Similarity=0.075 Sum_probs=43.5
Q ss_pred CceeEEEEecCCCCceEEEEEecCC---C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG---E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~---~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
.|..+++.-- .++++.+.|..... . .-.|+|......... ...... +-...++
T Consensus 7 ~P~~l~v~~~-t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~----~~~~v~------------------~~~t~~~ 63 (101)
T 3k2m_C 7 VPTKLEVVAA-TPTSLLISWDAPMSSSSVYYYRITYGETGGNSPV----QEFTVP------------------YSSSTAT 63 (101)
T ss_dssp SSCEEEEEEE-ETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCC----EEEEEE------------------TTCCEEE
T ss_pred CCcceEEeec-CCCEEEEEecCCCCCCceeeEEEEEEECCCCCcc----EEEEcC------------------CCccEEE
Confidence 4777777543 35899999976541 1 245888775432110 001111 1124678
Q ss_pred EcCCCCCcEEEEEEecC
Q 006938 176 IKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~ 192 (625)
|+||+|||.|.++|..-
T Consensus 64 l~~L~p~t~Y~~~V~A~ 80 (101)
T 3k2m_C 64 ISGLSPGVDYTITVYAW 80 (101)
T ss_dssp ECSCCTTCEEEEEEEEE
T ss_pred ECCCCCCCEEEEEEEEE
Confidence 99999999999999863
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=88.31 E-value=3.2 Score=42.13 Aligned_cols=87 Identities=15% Similarity=0.024 Sum_probs=52.3
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC--C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG--E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~--~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
..|..+.+.-..+.+++.|.|..... . .-.|+|....+....... ..+. +....++
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~------------------~~~~~~~ 61 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLE---EVVH------------------ADQSSCT 61 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEE---EEEC------------------TTCCEEE
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeE---EEec------------------CCcCEEE
Confidence 45888888765544579999987542 2 356888765432111000 0110 1124678
Q ss_pred EcCCCCCcEEEEEEecC-CCCcceeEEEEcCC
Q 006938 176 IKGLKKGVRYYYKVGSD-SKGWSETHSFVSRN 206 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~-~~~~S~~~~F~T~p 206 (625)
+++|+|+|.|.|||..- ..+.|...+..+.+
T Consensus 62 i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~ 93 (368)
T 1fnf_A 62 FDNLSPGLEYNVSVYTVKDDKESVPISDTIIP 93 (368)
T ss_dssp CCCCCTTSCEEEEEEEEETTEECCCEEEEECC
T ss_pred ECCCCCCCEEEEEEEEEcCCCccCceeeeecC
Confidence 99999999999999963 23455544444444
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=88.03 E-value=4.4 Score=39.41 Aligned_cols=97 Identities=14% Similarity=0.099 Sum_probs=58.2
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecC-CC-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAED-GE-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~-~~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
....|..+.+.... .+++.|.|.... .. .-.|+|......... ...... .....+
T Consensus 14 ~p~~P~~l~~~~~~-~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~----~~~~~~------------------~~~~~~ 70 (283)
T 1tdq_A 14 VIDGPTQILVRDVS-DTVAFVEWTPPRAKVDFILLKYGLVGGEGGK----TTFRLQ------------------PPLSQY 70 (283)
T ss_dssp SSCCCEEEEEEEEC-SSCEEEEEECCSSCCSEEEEEEEESSSSCCC----EEEEEC------------------TTCSEE
T ss_pred CCCCCcEEEEEecC-CCeEEEEEECCCCceeEEEEEEEEecCCCCc----EEEEeC------------------CCCCEE
Confidence 45668888876543 589999998765 33 356888654332111 011111 112466
Q ss_pred EEcCCCCCcEEEEEEecCC-CCcc--eeEEEEcCCCCCCcceEEE
Q 006938 175 VIKGLKKGVRYYYKVGSDS-KGWS--ETHSFVSRNEDSNETIAFL 216 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~-~~~S--~~~~F~T~p~~~~~~~f~v 216 (625)
+|++|+|++.|.++|.... .+.| ....|.|+|.....+++..
T Consensus 71 ~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P~~l~~~~ 115 (283)
T 1tdq_A 71 SVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPKNLRVGS 115 (283)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEEE
T ss_pred EecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCCCceEEEe
Confidence 7999999999999999632 2233 3456777765544444433
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.83 E-value=1.7 Score=36.99 Aligned_cols=68 Identities=10% Similarity=0.033 Sum_probs=42.5
Q ss_pred CCceeEEEEecCCCCceEEEEEecC--CC---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED--GE---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~--~~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+++.-.. +++.|+|.... +. .-.|+|..... ... ..... .-...
T Consensus 19 ~~P~~l~~~~~~--~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~-----~~~~~------------------~~~~~ 72 (116)
T 2edb_A 19 DQPSSLHVRPQT--NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAE-----TVRVD------------------SKQRY 72 (116)
T ss_dssp CCCSCEEEEECS--SCEEEEECCCSCTTBCCCEEEEEEEESST-TSE-----EEEEE------------------TTCCE
T ss_pred CCCCCeEEEECC--CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeE-----EEEeC------------------CCeeE
Confidence 357788877664 89999997543 11 24577765321 111 01111 11235
Q ss_pred EEEcCCCCCcEEEEEEecC
Q 006938 174 AVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~ 192 (625)
.+|+||+|+|.|.+||..-
T Consensus 73 ~~l~~L~p~t~Y~~~V~A~ 91 (116)
T 2edb_A 73 YSIERLESSSHYVISLKAF 91 (116)
T ss_dssp EEECSCCSSSBEEEEEEEE
T ss_pred EEeCCCCCCCEEEEEEEEE
Confidence 6799999999999999863
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=87.77 E-value=2.3 Score=36.40 Aligned_cols=89 Identities=12% Similarity=0.098 Sum_probs=49.1
Q ss_pred CceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCC-CC---cEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQ-MG---HVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~-~~---~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
.|.++++.-. ++++++++|..... ..-.|+|...... .. ..-........ +-...
T Consensus 11 ~p~~L~v~~~-T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~------------------~~~t~ 71 (112)
T 2cui_A 11 RLSQLSVTDV-TTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVP------------------GTRHS 71 (112)
T ss_dssp CCCCCEEESC-CSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEE------------------TTCCE
T ss_pred CCCceEEEee-cCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEEcC------------------CCcCE
Confidence 3455555433 36889999976543 2456888765431 00 00000011111 11237
Q ss_pred EEEcCCCCCcEEEEEEecCC-CCcc--eeEEEEcCCC
Q 006938 174 AVIKGLKKGVRYYYKVGSDS-KGWS--ETHSFVSRNE 207 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~~-~~~S--~~~~F~T~p~ 207 (625)
++|+||+|||.|..+|..-. .+.| -....+|.+.
T Consensus 72 ~~l~gL~PgT~Y~~~V~A~~~~~~s~p~~~~~~T~~~ 108 (112)
T 2cui_A 72 AVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSG 108 (112)
T ss_dssp EEECSCCTTCEEEEEEEEECSSSEEEEEEEEEECCCC
T ss_pred EEeCCCCCCCEEEEEEEEEECCcccCCEEEEEEECCC
Confidence 88999999999999998642 2333 2345666553
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=87.57 E-value=2.8 Score=38.83 Aligned_cols=86 Identities=10% Similarity=0.101 Sum_probs=50.8
Q ss_pred CCCceeEEEEecCCCCceEEEEEecC--C---CceEEEEEccCCCC-CcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAED--G---EKRYVKYGEKKDQM-GHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~--~---~~~~V~yg~~~~~~-~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
+..|..+.+.- ..+++.+.|.... . ..-.|+|....+.. ..... .... . ..
T Consensus 6 P~~P~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~---~~~~--------~----------~~ 62 (205)
T 1cfb_A 6 PNAPKLTGITC--QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY---EKVP--------N----------TD 62 (205)
T ss_dssp CCCCEEEEEEE--CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE---EEEE--------T----------TC
T ss_pred CCCCCCcEEEe--cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeee---eccC--------C----------Cc
Confidence 34688888877 6789999998653 1 12457786553211 11110 0110 0 01
Q ss_pred EEEEEcCCCCCcEEEEEEecCC----CCcc-eeEEEEcCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS----KGWS-ETHSFVSRNE 207 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~----~~~S-~~~~F~T~p~ 207 (625)
....+ +|+|+|.|.|||..-. +.+| ....++|.+.
T Consensus 63 ~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 63 SSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp SEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred eEEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 13335 8999999999998632 3456 4567777653
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=87.53 E-value=3 Score=34.69 Aligned_cols=85 Identities=25% Similarity=0.266 Sum_probs=56.2
Q ss_pred CCCCceeEEEEecC-CCCceEEEEEecCCC---ceEEEEEccCCCC-CcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 97 DGTGPRAGALGFTE-DASEMRVMFLAEDGE---KRYVKYGEKKDQM-GHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 97 ~~~~P~qv~L~~~~-~~~~~~V~W~T~~~~---~~~V~yg~~~~~~-~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
+...|.|+-++-+. .+++-.|.|...... +-.+.|....... ++.+ . -++++
T Consensus 4 ~~~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~-----~------------------Ip~h~ 60 (98)
T 1oww_A 4 GSSGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA-----T------------------IPGHL 60 (98)
T ss_dssp --CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEE-----E------------------ECSSC
T ss_pred CCCcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCCceeEE-----E------------------ecCcc
Confidence 34557788876654 379999999988743 4667787765421 1111 1 13466
Q ss_pred EEEEEcCCCCCcEEEEEEecCC-CCcce--eEEEEc
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS-KGWSE--THSFVS 204 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~-~~~S~--~~~F~T 204 (625)
..-+|+||+||..|+=+|-+-. -+|++ .+.|.|
T Consensus 61 nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 61 NSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp CEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred ceEEEecCCCCcEEEEEEEEeeccCcccceEEEEEe
Confidence 7778999999999999998743 36765 456655
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=87.48 E-value=7.3 Score=37.82 Aligned_cols=97 Identities=12% Similarity=0.118 Sum_probs=56.1
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
....|..+++... ..+++.|.|..... ..-.|+|.......... ..... ..+-...+
T Consensus 104 ~p~~P~~l~~~~~-~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~-----~~~~~---------------~~~~~~~~ 162 (283)
T 1tdq_A 104 EIDAPKNLRVGSR-TATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHE-----VLVPK---------------GIGPTTKT 162 (283)
T ss_dssp CCCCCEEEEEEEE-CSSCEEEEEECCSSCCSEEEEEEEETTCCCCEE-----EEEEC---------------CSSSEEEE
T ss_pred CCCCCCceEEEec-CCCeEEEEecCCCCCccEEEEEEEeCCCCcceE-----EECCC---------------CCcccceE
Confidence 4566777776543 36899999987642 24567786654321111 11110 01115678
Q ss_pred EEcCCCCCcEEEEEEecCC-CCcce--eEEEEcCCCCCCcceE
Q 006938 175 VIKGLKKGVRYYYKVGSDS-KGWSE--THSFVSRNEDSNETIA 214 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~-~~~S~--~~~F~T~p~~~~~~~f 214 (625)
++++|+|++.|.++|..-. .+.|. ...+.|.|.....+++
T Consensus 163 ~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~~P~~l~~ 205 (283)
T 1tdq_A 163 TLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDSPRDLMV 205 (283)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEE
T ss_pred EEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCCCCCccEE
Confidence 8999999999999999632 23443 3455555543333333
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=87.45 E-value=1.1 Score=43.74 Aligned_cols=85 Identities=16% Similarity=0.137 Sum_probs=52.9
Q ss_pred CCCCceeEEEEecCC-C----CceEEEEEecCC---------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCc
Q 006938 97 DGTGPRAGALGFTED-A----SEMRVMFLAEDG---------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSS 162 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~-~----~~~~V~W~T~~~---------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~ 162 (625)
....|..+++.+... . .++.|.|..... ..-.|+|....+...... .
T Consensus 130 ~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~-------~------------ 190 (236)
T 1axi_B 130 QPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMM-------D------------ 190 (236)
T ss_dssp CCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEEC-------C------------
T ss_pred ccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEE-------e------------
Confidence 356687886655442 2 359999986532 235688877653211110 0
Q ss_pred ccccCCceEEEEEEcCCCCCcEEEEEEecC--C----CCcceeEEEEcC
Q 006938 163 IGWRDPGWIFDAVIKGLKKGVRYYYKVGSD--S----KGWSETHSFVSR 205 (625)
Q Consensus 163 ~g~~~~~~~h~a~ltgL~PgT~Y~YrV~~~--~----~~~S~~~~F~T~ 205 (625)
......++|.+|+|||+|..||... . +.||+...|+|+
T Consensus 191 -----~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 191 -----PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp -----CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred -----ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 0011467788999999999999963 1 256777888775
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=87.40 E-value=1.9 Score=36.84 Aligned_cols=84 Identities=13% Similarity=0.060 Sum_probs=50.1
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC----C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG----E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~----~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+.+.- ..+++.+.|.-... . .-.|+|......+ .... . .+. +-..+
T Consensus 9 ~pP~~l~v~~--~~~sv~L~W~pP~~~~~~I~gY~vey~~~~~~W-~~~~-~--~~~------------------~~~t~ 64 (108)
T 1v5j_A 9 SPPRGLVAVR--TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGW-EVLD-P--AVA------------------GTETE 64 (108)
T ss_dssp CCCEEEEEEE--CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCC-EEEE-E--EEC------------------SSCCE
T ss_pred CCCcceEEEE--eCCEEEEEECCCCCCCCCCcEEEEEEEeCCCCc-EEee-e--ecC------------------CCcCE
Confidence 4577777764 35789999986642 2 3568898743222 2111 1 111 11235
Q ss_pred EEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 174 AVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
+++.+|+|+++|.+||..-. +..|+...++|..
T Consensus 65 ~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~ 101 (108)
T 1v5j_A 65 LLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp EECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSS
T ss_pred EEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCC
Confidence 66999999999999998632 1234555555543
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=87.21 E-value=1.6 Score=35.90 Aligned_cols=71 Identities=20% Similarity=0.171 Sum_probs=43.7
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
..|..+++.-. .++++.|+|..... ..-.|+|....+.... ...... +-...++|
T Consensus 6 ~~P~~l~v~~~-t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~----~~~~v~------------------~~~t~~~l 62 (97)
T 3qht_C 6 SVPTKLEVVAA-TPTSLLISWDASSSSVSYYRITYGETGGNSPV----QEFTVP------------------GSSSTATI 62 (97)
T ss_dssp CSSSSCEEEEE-ETTEEEEECCCCCSSCCEEEEEEEESSSCSCC----EEEEEE------------------TTCCEEEE
T ss_pred CCCCceEEEec-CCCEEEEEEeCCCCCCCEEEEEEEECCCCCcc----EEEEeC------------------CCcCEEEe
Confidence 45777776543 35899999976532 2346778765432101 001111 11246789
Q ss_pred cCCCCCcEEEEEEecC
Q 006938 177 KGLKKGVRYYYKVGSD 192 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~ 192 (625)
+||+|+|.|..+|..-
T Consensus 63 ~~L~p~t~Y~v~V~A~ 78 (97)
T 3qht_C 63 SGLSPGVDYTITVYAY 78 (97)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999863
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.12 E-value=1.7 Score=47.10 Aligned_cols=83 Identities=11% Similarity=0.094 Sum_probs=50.3
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHH---------HhCCCCcEEEEcCccccCCCc-----------
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIE---------ALGDKPAFVSHIGDISYARGY----------- 269 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~---------~~~~~pdfvl~~GDivy~~g~----------- 269 (625)
++..+++++|.+.+.... .....++.+++-+. ..+.++..+|++||.+...+.
T Consensus 199 ~~~~ialVSGL~igs~~~-------~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~ 271 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGG-------ESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYL 271 (476)
T ss_dssp SCCEEEEECCCCBTSSCH-------HHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------C
T ss_pred CCCEEEEECCcccCCCcc-------cchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhcc
Confidence 345788999999885310 00112222222221 223578999999999875421
Q ss_pred --------hhhHHHHHHhHHHhhcCCceEEccCCCCCC
Q 006938 270 --------SWLWDEFFALIEPVASRVAYHVCIGNHEYD 299 (625)
Q Consensus 270 --------~~~wd~f~~~l~~~~~~iP~~~v~GNHD~~ 299 (625)
....+.+.+.+..+...+|+...|||||-.
T Consensus 272 ~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~ 309 (476)
T 3e0j_A 272 TKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPT 309 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSS
T ss_pred ccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcc
Confidence 012334444555667899999999999975
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.95 E-value=2 Score=39.90 Aligned_cols=85 Identities=21% Similarity=0.227 Sum_probs=49.1
Q ss_pred CceeEEEEec-CCCCceEEEEEecCC---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 100 GPRAGALGFT-EDASEMRVMFLAEDG---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 100 ~P~qv~L~~~-~~~~~~~V~W~T~~~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
.|.++.+.-. ..++++.|.|....+ ..-.|+|......... ...... +....++
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~----~~~~~~------------------~~~~~~~ 59 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRW----KEATIP------------------GHLNSYT 59 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCC----EEEEEC------------------TTCCEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCce----EEEecC------------------CCccEEE
Confidence 4667665442 236899999987642 2356788765432111 011111 1123678
Q ss_pred EcCCCCCcEEEEEEecCC-CCcc--eeEEEEcCC
Q 006938 176 IKGLKKGVRYYYKVGSDS-KGWS--ETHSFVSRN 206 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~~-~~~S--~~~~F~T~p 206 (625)
|+||+|+|.|.+||..-. .+.+ ....|+|.+
T Consensus 60 i~~L~p~t~Y~~~V~a~n~~G~~~~~~~~~~t~~ 93 (201)
T 2ha1_A 60 IKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 93 (201)
T ss_dssp ECSCCTTEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred ecCCCCCCEEEEEEEEEecccccCceeEEEecCC
Confidence 999999999999999642 1222 244566643
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.92 E-value=1.8 Score=40.88 Aligned_cols=73 Identities=8% Similarity=-0.044 Sum_probs=43.9
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecCC----CceEEEEEccCCC-CCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAEDG----EKRYVKYGEKKDQ-MGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~~----~~~~V~yg~~~~~-~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
-...|..+++.....++++.|.|..... ..-.|+|...+.. ...... .. ..-.
T Consensus 109 kp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~-----~~-----------------~~~~ 166 (206)
T 3v6o_A 109 KPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYE-----VY-----------------DAKS 166 (206)
T ss_dssp CCCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEEE-----EC-----------------C---
T ss_pred cCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEe-----cc-----------------cCcc
Confidence 4566887888766567899999986542 2466888776421 111110 00 0112
Q ss_pred EEEEEcCCCCCcEEEEEEec
Q 006938 172 FDAVIKGLKKGVRYYYKVGS 191 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~ 191 (625)
..+.|.+|+|||+|..||..
T Consensus 167 ~~~~l~~L~p~t~Y~vqVRa 186 (206)
T 3v6o_A 167 KSVSLPVPDLCAVYAVQVRC 186 (206)
T ss_dssp CEEEECCSCTTSCEEEEEEE
T ss_pred eeEEeecCCCCCEEEEEEEE
Confidence 35779999999999999985
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.74 E-value=6.8 Score=36.31 Aligned_cols=92 Identities=15% Similarity=0.173 Sum_probs=52.8
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecC--CCc----eEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCce
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAED--GEK----RYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGW 170 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~--~~~----~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~ 170 (625)
.+..|..+.+.. ...++.+.|.... ... -.|+|...+....... .+... ....
T Consensus 113 ~P~~p~~~~~~~--~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~-----~~~~~--------------~~~~ 171 (215)
T 3mtr_A 113 TPSSPSIDQVEP--YSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK-----WYDAK--------------EASM 171 (215)
T ss_dssp CCCCCEEEEEEE--ETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEE-----EEEHH--------------HHHH
T ss_pred CCCCCcceEEEE--ecceEEEEEecCCccCCCceEEEEEEEEECCCCccccc-----ccccc--------------cccc
Confidence 455566665543 3478999997432 221 2477766554322211 11100 0000
Q ss_pred EEEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCCC
Q 006938 171 IFDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNEDS 209 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~~ 209 (625)
-...+|.+|+|++.|.|||.... +.+|..-.|+|+|..+
T Consensus 172 ~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 172 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp HTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred cccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 14567999999999999998632 3567888899988654
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=86.62 E-value=1.4 Score=38.18 Aligned_cols=68 Identities=10% Similarity=0.003 Sum_probs=42.6
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC----C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG----E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~----~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+++.-.. +++.|.|..... . .-.|+|.... . .. ..... .+-...
T Consensus 29 ~~P~~l~~~~~~--~sv~l~W~~P~~~~g~i~~Y~v~y~~~~-~-~~----~~~~~------------------~~~~~~ 82 (126)
T 1x5i_A 29 EVPSSLHVRPLV--TSIVVSWTPPENQNIVVRGYAIGYGIGS-P-HA----QTIKV------------------DYKQRY 82 (126)
T ss_dssp CSCSEEEEEEET--TEEEEEEECCSCTTBCCCEEEEEECSSC-G-GG----EEEEC------------------CTTCCE
T ss_pred CCCCeeEEEecC--CEEEEEEcCCCCCCCCEeEEEEEEEcCC-C-Cc----eEEEe------------------CCCeeE
Confidence 467788877763 899999986541 1 2457776321 1 11 00111 112246
Q ss_pred EEEcCCCCCcEEEEEEecC
Q 006938 174 AVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~ 192 (625)
.+|++|+|+|.|.+||..-
T Consensus 83 ~~i~~L~p~t~Y~~~V~A~ 101 (126)
T 1x5i_A 83 YTIENLDPSSHYVITLKAF 101 (126)
T ss_dssp EEECSCCSSCEECCEEEEE
T ss_pred EEEeCCCCCCEEEEEEEEE
Confidence 7799999999999999863
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.29 E-value=1.1 Score=37.35 Aligned_cols=71 Identities=21% Similarity=0.192 Sum_probs=43.9
Q ss_pred CCceeEEEEecCCCCceEEEEEecC----CC-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED----GE-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~----~~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+++.-- .++++.|.|.... .. .-.|+|.......... ..... +-...
T Consensus 9 ~~P~~l~v~~~-t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~----~~~v~------------------~~~ts 65 (103)
T 3t04_D 9 SVPTKLEVVDA-TPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ----EFTVP------------------GYYST 65 (103)
T ss_dssp CCCCSCEEEEE-ETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE----EEEEE------------------TTCCE
T ss_pred CCCceeEEEec-CCCEEEEEccCCCCCCCccceEEEEEEECCCCCccE----EEEcC------------------CCcCE
Confidence 45777777543 3689999997554 11 2468887654211110 01110 11246
Q ss_pred EEEcCCCCCcEEEEEEecC
Q 006938 174 AVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~ 192 (625)
++|+||+|+|.|..+|...
T Consensus 66 ~~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 66 ATISGLKPGVDYTITVYAY 84 (103)
T ss_dssp EEECSCCTTCCEEEEEEEE
T ss_pred EEeCCCCCCCEEEEEEEEE
Confidence 7899999999999999864
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=86.10 E-value=0.64 Score=39.73 Aligned_cols=90 Identities=11% Similarity=0.091 Sum_probs=53.2
Q ss_pred CCceeEEEEecCCCCceEEEEEecC----CC---ceEEEEEccCCCCCc---EEEeeEEEEeeccccCCCCCCcccccCC
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED----GE---KRYVKYGEKKDQMGH---VAVASVERYERGQMCDKPANSSIGWRDP 168 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~----~~---~~~V~yg~~~~~~~~---~~~a~~~~y~~~~~~~~~a~~~~g~~~~ 168 (625)
..|..+++... +.+++.|.|.... +. .-.|+|....+.... ........+.
T Consensus 16 ~~P~~l~~~~~-~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~------------------ 76 (125)
T 1uen_A 16 VAPGNVRVNVV-NSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQ------------------ 76 (125)
T ss_dssp CCCSSCEEEEE-ETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEE------------------
T ss_pred CCCceeEEEec-CCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEec------------------
Confidence 35667766533 3578999997642 11 245777665432110 0000111111
Q ss_pred ceEEEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 169 GWIFDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 169 ~~~h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
+-...++|+||+|+|.|.+||..-. +.+|+...|+|.+.
T Consensus 77 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 77 GSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SSCSEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCccEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 1124678999999999999998632 35778888998764
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=85.15 E-value=12 Score=36.56 Aligned_cols=88 Identities=10% Similarity=-0.045 Sum_probs=52.5
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC-C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG-E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~-~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
...|..+.+.-. .++++.|.|..... . .-.|+|.......... ..... +-...++
T Consensus 21 p~~P~~l~~~~~-~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~----~~~~~------------------~~~~~~~ 77 (290)
T 3r8q_A 21 IPAPTDLKFTQV-TPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMK----EINLA------------------PDSSSVV 77 (290)
T ss_dssp CCCCEEEEEEEE-CSSCEEEEEECCSSCCCEEEEEEEESSSSSCCE----EEEEC------------------TTCCEEE
T ss_pred CCCCCceEEEEC-CCCEEEEEEeCCCCCeeEEEEEEEeCCCCCceE----EEEcC------------------CCccEEE
Confidence 455777777543 36899999987642 2 3567887654321111 01110 1124677
Q ss_pred EcCCCCCcEEEEEEecCC-CCcc--eeEEEEcCCCC
Q 006938 176 IKGLKKGVRYYYKVGSDS-KGWS--ETHSFVSRNED 208 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~~-~~~S--~~~~F~T~p~~ 208 (625)
|++|+|++.|.++|..-. .+.| ....++|.+..
T Consensus 78 i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~ 113 (290)
T 3r8q_A 78 VSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENV 113 (290)
T ss_dssp ECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCC
T ss_pred eCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCC
Confidence 999999999999998632 1222 23457776443
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=84.96 E-value=5.2 Score=37.19 Aligned_cols=71 Identities=18% Similarity=0.151 Sum_probs=44.5
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
..|..+.+.-. .++++.|.|..... ..-.|+|....+..... .... .+-...++
T Consensus 115 p~P~~l~~~~~-~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~------------------~~~~~~~~ 171 (203)
T 2gee_A 115 PPPTDLRFTNI-GPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVA----ELSI------------------SPSDNAVV 171 (203)
T ss_dssp CCCEEEEEEEE-ETTEEEEEEECCSSCCCSEEEEEEEETTCGGGCE----EEEE------------------CTTCCEEE
T ss_pred cCCCceEEEEc-CCCEEEEEEcCCCCCCccEEEEEEEECCCCCccE----EEEc------------------CCCcCEEE
Confidence 36777776443 35899999987643 23567887644321110 0111 11224677
Q ss_pred EcCCCCCcEEEEEEecC
Q 006938 176 IKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~ 192 (625)
|+||+|+|.|.++|..-
T Consensus 172 i~~L~p~t~Y~~~V~A~ 188 (203)
T 2gee_A 172 LTNLLPGTEYVVSVSSV 188 (203)
T ss_dssp ECSCCTTCEEEEEEEEE
T ss_pred ECCCCCCCEEEEEEEEe
Confidence 99999999999999863
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=84.95 E-value=2.4 Score=43.26 Aligned_cols=36 Identities=8% Similarity=0.067 Sum_probs=27.2
Q ss_pred EEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
...+|++|+|+|.|.+||..-. +.+|.. .|+|.+.+
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~-~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTVY-EFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE-EEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCceee-EecCCCCC
Confidence 4567999999999999999632 245544 88887753
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=84.68 E-value=2.7 Score=35.43 Aligned_cols=71 Identities=10% Similarity=0.074 Sum_probs=41.3
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+++.-. ..+++.|.|..... ..-.|+|......... ..... .+-...
T Consensus 19 ~~P~~l~~~~~-~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~----~~~~~------------------~~~~~~ 75 (119)
T 1wfn_A 19 GPVGHLSFSEI-LDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTR----VTHYL------------------PNVTLE 75 (119)
T ss_dssp CCCSCCEEESC-CSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGC----CCEEE------------------CSSCCE
T ss_pred CCCCceEEEEC-CCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCce----EEEEe------------------CCCceE
Confidence 34666655433 35789999975431 1245667654421100 00000 112346
Q ss_pred EEEcCCCCCcEEEEEEecC
Q 006938 174 AVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~ 192 (625)
++|++|+|+|.|.+||..-
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~ 94 (119)
T 1wfn_A 76 YRVTGLTALTTYTIEVAAM 94 (119)
T ss_dssp EEEESCCTTCEEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEE
Confidence 7789999999999999864
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=84.58 E-value=3.1 Score=38.69 Aligned_cols=81 Identities=14% Similarity=0.174 Sum_probs=43.0
Q ss_pred CceeEEEEecCCCCceEEEEEecCC--C---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG--E---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~--~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
.|..+++.-. ..+++.|.|..... . .-.|+|...+.............+.. +.. . ....-...+
T Consensus 4 pP~~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~------~~~-~---~~~~~~~~~ 72 (214)
T 2ibg_A 4 PPTPPNVTRL-SDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGK------PKW-N---SELGKSFTA 72 (214)
T ss_dssp CCCCCEEEEE-ETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCS------SSC-S---SSSEEEEEE
T ss_pred CCCCCEeeEe-cCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccc------ccc-c---cccCcceeE
Confidence 3555555332 46899999975432 1 24577766532111111111111100 000 0 011345677
Q ss_pred EEcCCCCCcEEEEEEec
Q 006938 175 VIKGLKKGVRYYYKVGS 191 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~ 191 (625)
++++|+|+|.|.|||..
T Consensus 73 ~i~~L~p~t~Y~~~V~A 89 (214)
T 2ibg_A 73 SVTDLKPQHTYRFRILA 89 (214)
T ss_dssp EECSCCTTCEEEEEEEE
T ss_pred EecCCcCCCEEEEEEEE
Confidence 89999999999999986
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=84.03 E-value=6.7 Score=39.89 Aligned_cols=86 Identities=15% Similarity=0.032 Sum_probs=51.6
Q ss_pred CCceeEEEEecCCCCceEEEEEecC--CC-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED--GE-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~--~~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
..|..+.+.-....+++.|.|.... .. .-.|+|....+....... .... +....++
T Consensus 4 ~~P~~l~~~~~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~---~~~~------------------~~~~~~~ 62 (375)
T 3t1w_A 4 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLE---EVVH------------------ADQSSCT 62 (375)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEE---EEEE------------------TTCCEEE
T ss_pred CCCCccEEEecCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCccee---EEcC------------------CCccEEE
Confidence 3577787766543339999998664 22 346888765432111110 0111 1124667
Q ss_pred EcCCCCCcEEEEEEecC-CCCcceeEEEEcC
Q 006938 176 IKGLKKGVRYYYKVGSD-SKGWSETHSFVSR 205 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~-~~~~S~~~~F~T~ 205 (625)
|++|+|+|.|.++|..- ..+.|......+.
T Consensus 63 i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~ 93 (375)
T 3t1w_A 63 FDNLSPGLEYNVSVYTVKDDKESVPISDTII 93 (375)
T ss_dssp ECCCCTTCCEEEEEEEEETTEECCCEEEEEC
T ss_pred EcCCcCCCEEEEEEEEEcCCCCCCcEEeeEc
Confidence 99999999999999864 2355655555544
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=84.03 E-value=4.2 Score=38.51 Aligned_cols=90 Identities=12% Similarity=0.095 Sum_probs=49.1
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecCC--------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCC
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAEDG--------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDP 168 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~~--------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~ 168 (625)
-...|..+++.... +..+.|.|..... -.-.|+|....+..... ..... ..
T Consensus 97 kp~PP~nl~~~~~~-~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~~------~~~~~--------------~~ 155 (207)
T 1iar_B 97 KPRAPGNLTVHTNV-SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR------IYNVT--------------YL 155 (207)
T ss_dssp CCCCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE------EEEEC--------------SS
T ss_pred ccCCCCCeEEEEcc-CCCEEEEECCCCCccccccccEEEEEEEccCCCchhhe------eeeee--------------cC
Confidence 35667777777532 4689999987632 24679998766533211 01100 01
Q ss_pred ceEEEEEEcCCCCCcEEEEEEecCC----C---CcceeEEEEcCCC
Q 006938 169 GWIFDAVIKGLKKGVRYYYKVGSDS----K---GWSETHSFVSRNE 207 (625)
Q Consensus 169 ~~~h~a~ltgL~PgT~Y~YrV~~~~----~---~~S~~~~F~T~p~ 207 (625)
+......+.+|.||++|..||.... + .||+...|.|.+.
T Consensus 156 ~~~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 156 EPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CCEEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CcEEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 2345566779999999999999642 2 5778899998765
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=83.84 E-value=1.7 Score=36.30 Aligned_cols=58 Identities=19% Similarity=0.166 Sum_probs=36.4
Q ss_pred CCceEEEEEecCCC--ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcEEEEEE
Q 006938 112 ASEMRVMFLAEDGE--KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKV 189 (625)
Q Consensus 112 ~~~~~V~W~T~~~~--~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~Y~YrV 189 (625)
+++++|+|...... .-.|+|......... ..... ++-...++|+||+|||.|.-+|
T Consensus 19 ~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~----~~~~v------------------~g~~~s~~l~~L~PgT~Y~V~v 76 (95)
T 2h41_A 19 ASSFVVSWVSASDTVSGFRVEYELSEEGDEP----QYLDL------------------PSTATSVNIPDLLPGRKYIVNV 76 (95)
T ss_dssp GGCEEEECCCSCTTEEEEEEEEEETTTCCCC----EEEEE------------------ETTCCEEEECSCCTTCEEEEEE
T ss_pred CCeEEEEECCCCCCccEEEEEEEeCCCCCcc----eEEEC------------------CCCccEEEECCCCCCCEEEEEE
Confidence 47788888765432 356788776532111 00111 1223577899999999999998
Q ss_pred ec
Q 006938 190 GS 191 (625)
Q Consensus 190 ~~ 191 (625)
..
T Consensus 77 ~a 78 (95)
T 2h41_A 77 YQ 78 (95)
T ss_dssp EE
T ss_pred EE
Confidence 86
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.83 E-value=3.4 Score=37.54 Aligned_cols=70 Identities=16% Similarity=0.140 Sum_probs=43.5
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
...|..+.+.-. ..+++.|.|..... ..-.|+|...+....... ... -.
T Consensus 103 p~~p~~~~~~~~-~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~------~~~------------------~~ 157 (197)
T 3lpw_A 103 PLPPGKITLMDV-TRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATC------ATV------------------KV 157 (197)
T ss_dssp CCCCSCEEEEEE-CSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEE------EEE------------------SS
T ss_pred CCCCcccEEEec-cCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEe------ecc------------------cc
Confidence 456777776543 36799999986431 124677776543321111 000 01
Q ss_pred EEEEEcCCCCCcEEEEEEecC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
...++++|+|++.|.|+|..-
T Consensus 158 ~~~~~~~L~p~t~Y~~~V~A~ 178 (197)
T 3lpw_A 158 TEATITGLIQGEEYSFRVSAQ 178 (197)
T ss_dssp SEEEECCCCTTCEEEEEEEEE
T ss_pred cEEEeCCcCCCCEEEEEEEEE
Confidence 246789999999999999963
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=83.26 E-value=4.5 Score=39.65 Aligned_cols=85 Identities=15% Similarity=0.176 Sum_probs=53.4
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCCC---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDGE---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
...|..+++.... ...+.|.|....+. .-.|+|....+....... .. .....
T Consensus 137 P~PP~nl~v~~~~-~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~-----~~-------------------~~~~~ 191 (247)
T 2erj_C 137 PWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS-----VD-------------------YRHKF 191 (247)
T ss_dssp CCCCEEEEEEESS-SSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEE-----EC-------------------SSCEE
T ss_pred eCCCCeEEEEECC-CCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEe-----cC-------------------CceEE
Confidence 4667777777653 36899999876532 356888876543222211 00 01355
Q ss_pred EEcCCCCCcEEEEEEecCC-------C---CcceeEEEEcCCC
Q 006938 175 VIKGLKKGVRYYYKVGSDS-------K---GWSETHSFVSRNE 207 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~-------~---~~S~~~~F~T~p~ 207 (625)
.|.+|.|+++|..||.... + .||+...|.|.+.
T Consensus 192 ~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 192 SLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp EESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred EecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 6899999999999999532 2 4677778887654
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=82.87 E-value=4.4 Score=37.95 Aligned_cols=83 Identities=16% Similarity=0.163 Sum_probs=52.2
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
...|..+++.... ...+.|.|..... ..-.|+|....+....... .. .....
T Consensus 99 P~pP~~l~~~~~~-~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~-----~~-------------------~~~~~ 153 (199)
T 2b5i_C 99 PWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS-----VD-------------------YRHKF 153 (199)
T ss_dssp CCCCEEEEEEEEE-TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEE-----EC-------------------SSCEE
T ss_pred cCCCcEEEEEECC-CCCEEEEECCCCCCCceEEEEEEeecCCcccEEEe-----cc-------------------CceEE
Confidence 5667777777653 3689999987653 3467999876543222110 00 01356
Q ss_pred EEcCCCCCcEEEEEEecCC-------C---CcceeEEEEcC
Q 006938 175 VIKGLKKGVRYYYKVGSDS-------K---GWSETHSFVSR 205 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~-------~---~~S~~~~F~T~ 205 (625)
.|.+|.|+++|..||.... + .||+...|.|.
T Consensus 154 ~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 154 SLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp EECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred EecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 6899999999999999632 2 46666777664
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=82.19 E-value=2.4 Score=45.32 Aligned_cols=72 Identities=21% Similarity=0.163 Sum_probs=47.3
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
..|..+|+.-.. +++++++|....+ ..-.|+|.+....... ...... +-..+++
T Consensus 371 ~~~~~l~~~~~~-~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~----~~~~~~------------------~~~~~~~ 427 (461)
T 3csg_A 371 SVPTNLEVVAAT-PTSLLISWDASYSSSVSYYRITYGETGGNSPV----QEFTVP------------------GSKSTAT 427 (461)
T ss_dssp CSSCCCEEEEEC-SSCEEEECCCTTGGGCSEEEEEEEETTCCSCC----EEEEEE------------------TTCCEEE
T ss_pred CCCcceEEeccC-CCeEEEEecCCCCCcceEEEEEEEECCCCccc----eEEEec------------------CCCceEE
Confidence 458888876664 5789999987632 2467888877532100 011111 1125789
Q ss_pred EcCCCCCcEEEEEEecCC
Q 006938 176 IKGLKKGVRYYYKVGSDS 193 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~~ 193 (625)
|+||+|||+|..+|..-.
T Consensus 428 i~~L~p~t~Y~~~v~a~~ 445 (461)
T 3csg_A 428 ISGLSPGVDYTITVYAYS 445 (461)
T ss_dssp ECSCCTTCEEEEEEEEEC
T ss_pred ecCCCCCCEEEEEEEEEe
Confidence 999999999999999753
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=82.10 E-value=5.2 Score=36.98 Aligned_cols=84 Identities=14% Similarity=0.011 Sum_probs=48.2
Q ss_pred CceeEEEEecCCCCceEEEEEecC----C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED----G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~----~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
.|..+++... .++++.|.|.... + ..-.|+|........... .... .....
T Consensus 107 ~P~~~~~~~~-~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~----~~~~-----------------~~~~~ 164 (205)
T 1cfb_A 107 NPDNVVGQGT-EPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWEN----NNIF-----------------DWRQN 164 (205)
T ss_dssp CCSCCEEECS-STTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEE----EEEC-----------------CTTCC
T ss_pred CCeeeEeecC-CCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEE----EEec-----------------CCCcc
Confidence 4556565433 3578999997543 1 134677776654311100 0000 01124
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CC-cceeEEEEcC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KG-WSETHSFVSR 205 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~-~S~~~~F~T~ 205 (625)
..+|+||+|+|.|.+||..-. +. +|+...++|.
T Consensus 165 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 165 NIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp EEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred EEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 667999999999999998632 23 3556666664
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=82.05 E-value=1.4 Score=42.18 Aligned_cols=93 Identities=14% Similarity=0.143 Sum_probs=53.0
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
+..|..+++... ..+++.|.|..... ..-.|+|....+..... +....... ......
T Consensus 99 P~~P~~l~~~~~-~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~~---------------~~~~~~ 160 (234)
T 3f7q_A 99 PSEPGRLAFNVV-SSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVLV---------------DNPKNR 160 (234)
T ss_dssp CCCCCCCEEEEC-SSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECCC---------------SCTTCC
T ss_pred CCCCCccEEEEe-cCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEEe---------------cCCcce
Confidence 345677776643 35789999975432 12457777654321100 00001000 011224
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcce-eEEEEcCCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSE-THSFVSRNED 208 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~-~~~F~T~p~~ 208 (625)
..+|+||+|+|.|.++|..-. +.+|+ ...|+|.+..
T Consensus 161 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~ 201 (234)
T 3f7q_A 161 MLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKR 201 (234)
T ss_dssp EEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCC
T ss_pred EEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCC
Confidence 677999999999999998632 34565 4778887643
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=80.73 E-value=2.2 Score=46.52 Aligned_cols=90 Identities=7% Similarity=0.104 Sum_probs=56.8
Q ss_pred CCCceeEEEEecCCCCceEEEEEecC--C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAED--G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~--~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
+..|..+++... .++++.|.|.... + ..-.|+|...++..... ...... ...-.+
T Consensus 387 P~PP~nl~v~~~-s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~----~~~~~~---------------~~~~~~ 446 (488)
T 2q7n_A 387 PHDPTSLKVKDI-NSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVR----NATIRG---------------AEDSTY 446 (488)
T ss_dssp CCCCEEEEEEEC-STTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEE----EEEEEC---------------CEEEEE
T ss_pred CCCCeEEEEEec-CCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceE----EEEEec---------------CCCcEE
Confidence 456777776553 4689999998653 2 13568887765421110 011110 012346
Q ss_pred EEEEcCCCCCcEEEEEEecC---C---CCcceeEEEEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSD---S---KGWSETHSFVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~---~---~~~S~~~~F~T~p~ 207 (625)
.++|++|+|+|+|..||... . +.||+...|+|++.
T Consensus 447 ~v~l~~L~P~T~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 447 HVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp EEEECSCCSSCCBBCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred EEEeCCCCCCceEEEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 77899999999999999853 1 36778888888763
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=80.71 E-value=2.8 Score=35.83 Aligned_cols=79 Identities=11% Similarity=-0.000 Sum_probs=48.4
Q ss_pred CceeEEEEecCCCCceEEEEEecC----CC---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED----GE---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~----~~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
.|..+++.. ..+++.|.|.-.. ++ .-.|.|......... .+.. .. +
T Consensus 21 ~P~~v~~~~--~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~-------~~~~----------------~~--~ 73 (117)
T 1wj3_A 21 PPGNVVWNA--TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQ-------VLNT----------------NK--T 73 (117)
T ss_dssp CCCSCBCCE--ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCE-------EEEE----------------SS--S
T ss_pred CCccEEEEE--eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCe-------EEeC----------------CC--c
Confidence 456566544 4578999997542 11 245777765532211 1110 01 2
Q ss_pred EEEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRN 206 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p 206 (625)
.+++. |+|+|.|.+||..- .+.+|+...|+|..
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCC
Confidence 45566 99999999999862 24678888898865
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 625 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 1e-52 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 1e-24 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 3e-11 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 2e-09 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 2e-09 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 5e-07 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 2e-04 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 180 bits (458), Expect = 1e-52
Identities = 78/327 (23%), Positives = 125/327 (38%), Gaps = 51/327 (15%)
Query: 216 LFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYS----W 271
L GD+G + T L E K V +GD+SYA Y
Sbjct: 12 LIGDLGQSFDSNT--------------TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNV 57
Query: 272 LWDEFFALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFH 331
WD + E + + GNHE ++ E P+S ++H
Sbjct: 58 RWDTWGRFTERSVAYQPWIWTAGNHEIEFA-------------PEINETEPFKPFSYRYH 104
Query: 332 MPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKK 391
+P + + T +YS H + +S+ + + +G+ QY ++K +L V R +
Sbjct: 105 VPYEASQSTS-------PFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSE 157
Query: 392 TPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPLNN 451
TP+++V H P+Y + N M E FV+ V + GHVH YER ++N
Sbjct: 158 TPWLIVLMHSPLYNSYN--HHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSN 215
Query: 452 FTCGSMGMDGEPSE--AFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEF 509
P + + PV+I IG AG + + PQP S +R F
Sbjct: 216 IAYKITNGLCTPVKDQSAPVYITIGDAGN--------YGVIDSNMIQPQPEYSAFREASF 267
Query: 510 GYTRL-VATKEKLTLSYVGNHDGEVHD 535
G+ + + S+ N DG +
Sbjct: 268 GHGMFDIKNRTHAHFSWNRNQDGVAVE 294
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 102 bits (254), Expect = 1e-24
Identities = 45/330 (13%), Positives = 94/330 (28%), Gaps = 46/330 (13%)
Query: 216 LFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDE 275
GD G + ++ K I ++ L F+ +GD Y G D+
Sbjct: 9 AVGDWGGVPNAPFHTARE---MANAKAIATTVKTL--GADFILSLGDNFYFTGVHDAKDK 63
Query: 276 FF------ALIEPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLK 329
F +P V +HV GNH++ + + + + +
Sbjct: 64 RFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIP 123
Query: 330 FHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDR 389
++ T + + N Q +IK L +
Sbjct: 124 RSNVSVAIFMLDT-------VTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAKE 176
Query: 390 KKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERFCPL 449
GH P+++ + + +++ L PL + VT L GH H +
Sbjct: 177 DYVLVA---GHYPVWSIAEHGPT----HCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDE 229
Query: 450 NNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEF 509
N ++ G + + P
Sbjct: 230 N----------------GLGFVLSGAGN----FMDPSKKHLRKVPNGYLRFHFGAENSLG 269
Query: 510 GYTRLVATKEKLTLSYVGNHDGEVHDMVEI 539
G+ + T ++++++Y+ G+ ++
Sbjct: 270 GFAYVEITPKEMSVTYI-EASGKSLFKTKL 298
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 58.8 bits (142), Expect = 3e-11
Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 15/96 (15%)
Query: 110 EDASEMRVMFL-AEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDP 168
M + ++ ++ V+Y +K+ +A + Y
Sbjct: 29 LVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTY------------RFFNYSS 76
Query: 169 GWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVS 204
G+I I+ LK +YYY+VG + SF++
Sbjct: 77 GFIHHTTIRKLKYNTKYYYEVGLR--NTTRRFSFIT 110
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 57.1 bits (136), Expect = 2e-09
Identities = 34/288 (11%), Positives = 68/288 (23%), Gaps = 40/288 (13%)
Query: 217 FGDMGAATPYT-TFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYA--RGYSWLW 273
+ D+ Y T R S ++ + ++ V +GDI R
Sbjct: 14 YADIEDGENYLRTRRRYYRGSADLLRDAVLQWRR--ERVQCVVQLGDIIDGHNRRRDASD 71
Query: 274 DEFFALIEPVASRVA--YHVCIGNHEYDWPLQPW-------KPDWSYTVYGTDGGGECGV 324
++ + + +HV + Y++ G +
Sbjct: 72 RALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYA 131
Query: 325 PYSLK---------------FHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETN 369
E ++ + V + E
Sbjct: 132 YEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQR 191
Query: 370 FLQ-----GSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLE 424
F++ Q ++ L D K+ ++ ++ N L
Sbjct: 192 FVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADP--ICLAWNHE-AVLS 248
Query: 425 PLFVENNVTLALWGHVHRYERFCPLNN---FTCGSMGMDGEPSEAFPV 469
L +V + GH H R + T + S AF
Sbjct: 249 VLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIETPPHSHAFAT 296
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 53.4 bits (128), Expect = 2e-09
Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 16/97 (16%)
Query: 110 EDASEMRVMFL--AEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRD 167
+ + + + + V Y + + A+ +V Y+
Sbjct: 35 YEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYT------------ 82
Query: 168 PGWIFDAVIKGLKKGVRYYYKVGSDSKGWSETHSFVS 204
+I IK L+ +YYY++G FV+
Sbjct: 83 SAFIHHCTIKDLEYDTKYYYRLGFG--DAKRQFWFVT 117
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 49.3 bits (116), Expect = 5e-07
Identities = 25/211 (11%), Positives = 48/211 (22%), Gaps = 32/211 (15%)
Query: 234 DESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVCI 293
+ + ++ + AL ++P V GDI G + ++ + ++
Sbjct: 22 IDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSL--NYPLYLIP 78
Query: 294 GNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYS 353
GNH+ + + C
Sbjct: 79 GNHDDKALFLEYLQPLCPQLGSDANNMRC-----------------------------AV 109
Query: 354 FDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDA 413
D S+ +G I + + H P N D
Sbjct: 110 DDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDP 169
Query: 414 PLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444
L + ++T GH H
Sbjct: 170 IACENGHRLLALVERFPSLTRIFCGHNHSLT 200
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 24/210 (11%), Positives = 57/210 (27%), Gaps = 35/210 (16%)
Query: 235 ESISTMKWILRDIEALGDKPAFVSHIGDIS-YARGYSWLWDEFFALIEPVASRVAYHVCI 293
++ + +L + G +P + GD++ ++ +
Sbjct: 27 DADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVM 86
Query: 294 GNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYS 353
GNH+ L+ + D + ++ D
Sbjct: 87 GNHDDRAELRKFLLDEAPSMAPLD---------------------------------RVC 113
Query: 354 FDMGVVHFVYISTETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDA 413
G+ V ++ G + + + E + ++ H P + +
Sbjct: 114 MIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVT 173
Query: 414 PLRNRMLEHLEPLFVENNVTLALWGHVHRY 443
+ R L + +V L GH+H
Sbjct: 174 -VELRDQAALGRVLRGTDVRAILAGHLHYS 202
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 625 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.87 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.83 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.82 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.82 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.82 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.6 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.53 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.04 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 98.96 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.95 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.86 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.72 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.58 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.23 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.19 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.89 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.75 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 96.91 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 96.84 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 96.72 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 96.51 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.48 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.44 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 96.38 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 96.36 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 96.26 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.19 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.12 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.08 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.08 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.07 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.05 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 96.02 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 95.98 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.97 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 95.9 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 95.84 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 95.78 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 95.78 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 95.78 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 95.73 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.7 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 95.39 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 95.35 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 95.35 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.32 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 95.22 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 95.2 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 95.17 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 95.17 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 95.16 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 95.14 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.14 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.13 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.06 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 95.01 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.0 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 94.95 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 94.94 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 94.92 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 94.83 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 94.6 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 94.54 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 94.45 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 94.42 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 94.34 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 94.3 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 94.23 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 94.22 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 93.93 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 93.87 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 93.83 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 93.82 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 93.7 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 93.57 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 93.48 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 93.48 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 93.44 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 93.4 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 93.2 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 92.77 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 92.72 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 92.67 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 92.43 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 92.32 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 92.02 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 91.7 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 91.4 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 91.39 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 91.15 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 90.24 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 90.05 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 89.91 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 89.77 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 89.42 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 89.39 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 87.75 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 87.52 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 87.23 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 85.07 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 82.63 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 82.09 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 80.18 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=3.7e-50 Score=419.17 Aligned_cols=291 Identities=27% Similarity=0.394 Sum_probs=231.5
Q ss_pred CCcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC----chhhHHHHHHhHHHhh
Q 006938 209 SNETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG----YSWLWDEFFALIEPVA 284 (625)
Q Consensus 209 ~~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g----~~~~wd~f~~~l~~~~ 284 (625)
..+++|+++||+|... .+..++ ..+.....+|||||++||++|+++ ...+|+.|++.++++.
T Consensus 5 ~~p~~F~v~GD~g~~~----------~~~~~~----~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~ 70 (312)
T d2qfra2 5 DVPYTFGLIGDLGQSF----------DSNTTL----SHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSV 70 (312)
T ss_dssp SCCEEEEEECSCCSBH----------HHHHHH----HHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeeCCCCC----------chHHHH----HHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHh
Confidence 3579999999997642 122222 222334578999999999998765 3568999999999999
Q ss_pred cCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEE
Q 006938 285 SRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYI 364 (625)
Q Consensus 285 ~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~L 364 (625)
+.+|+++++||||++... .....+++.+|..+|.||.++.. ...+.||+|++|++|||+|
T Consensus 71 ~~~P~~~~~GNHD~~~~~-------------~~~~~~~~~~~~~~f~~P~~~~~-------~~~~~~Ysf~~g~v~fi~L 130 (312)
T d2qfra2 71 AYQPWIWTAGNHEIEFAP-------------EINETEPFKPFSYRYHVPYEASQ-------STSPFWYSIKRASAHIIVL 130 (312)
T ss_dssp TTSCEEECCCGGGTCCBG-------------GGTBCSTTHHHHHHCCCCGGGGT-------CSSTTSEEEEETTEEEEEC
T ss_pred hcceEEEecccccccccc-------------cccccccccchhhhccCCccccC-------CCCCceEEEEECCEEEEEe
Confidence 999999999999986321 11122455668889999976432 1346799999999999999
Q ss_pred eCCcccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 365 STETNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 365 DT~~~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
|++..+..+.+|++||+++|++++++++||+||++|+|+|++...... ....+++.|++||.+|+||+||+||+|.||
T Consensus 131 ds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~--~~~~~r~~l~~l~~~~~Vdlv~~GH~H~Ye 208 (312)
T d2qfra2 131 SSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFM--EGEAMRTKFEAWFVKYKVDVVFAGHVHAYE 208 (312)
T ss_dssp CTTSCCSTTSHHHHHHHHHHHTCCTTTCCEEEEECSSCSSCCBSTTTT--TTHHHHHHHHHHHHHTTCSEEEECSSSSEE
T ss_pred eccccccchHHHHHHHHHHHHHHhhcCCCEEEEEccccccccCCCCcc--cchhHHHHHHHHHHHcCcEEEEEccCcceE
Confidence 999887788999999999999998889999999999999998654432 235678999999999999999999999999
Q ss_pred eeeccCCccccCCCCCC--CCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEE-eCCEE
Q 006938 445 RFCPLNNFTCGSMGMDG--EPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVA-TKEKL 521 (625)
Q Consensus 445 R~~p~~~~~~~~~~~~~--~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v-~~~~L 521 (625)
|++|++++++....... ..+++||+|||+|+||+.... ......++|.|+++++..+||++|++ +.++|
T Consensus 209 Rt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~--------~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l 280 (312)
T d2qfra2 209 RSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVI--------DSNMIQPQPEYSAFREASFGHGMFDIKNRTHA 280 (312)
T ss_dssp EECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCC--------CCCBCSSCCTTEEEEECCCEEEEEEECSSSEE
T ss_pred EEeeccCCcccccCCccccccCCCcCEEEEECcCCCcccc--------cccccCCCCCeeEEEecCCCEEEEEEEcCCeE
Confidence 99999998864333211 224789999999999964221 11223367899999999999999998 88999
Q ss_pred EEEEEECCCCcEE--EEEEEEecC
Q 006938 522 TLSYVGNHDGEVH--DMVEILASG 543 (625)
Q Consensus 522 ~~~~i~~~dG~v~--D~f~I~k~~ 543 (625)
.++|+++.||+++ |+|+|.|+-
T Consensus 281 ~~~~~~~~d~~~~~~D~~~i~~~~ 304 (312)
T d2qfra2 281 HFSWNRNQDGVAVEADSVWFFNRH 304 (312)
T ss_dssp EEEEEESSSCTTCCSEEEEEECTT
T ss_pred EEEEEECCCCCEEeeeEEEEEeCC
Confidence 9999999999987 999999875
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=6.8e-33 Score=282.76 Aligned_cols=268 Identities=19% Similarity=0.252 Sum_probs=181.0
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCc----hhhHHHHHHhH--HHh
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY----SWLWDEFFALI--EPV 283 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~----~~~wd~f~~~l--~~~ 283 (625)
..++|+++||+|........ +.......+.+.+.+++ .+|||||++||++|..+. ..+|.++++.+ ...
T Consensus 3 ~~~~F~vigD~g~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~ 77 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAPFH---TAREMANAKAIATTVKT--LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPS 77 (302)
T ss_dssp CCEEEEEECSCCCCSSTTSS---CHHHHHHHHHHHHHHHH--HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGG
T ss_pred CCeEEEEEecCCCCCCcccc---cHHHHHHHHHHHHHHhh--CCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhh
Confidence 46899999999876543211 12222334445555543 589999999999997653 34565554443 234
Q ss_pred hcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEe------C
Q 006938 284 ASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDM------G 357 (625)
Q Consensus 284 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~------G 357 (625)
...+|+++++||||+..... ..+....+..++.+|. .||++.+ +
T Consensus 78 ~~~~P~~~~~GNHD~~~~~~---------------~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~ 127 (302)
T d1utea_ 78 LRNVPWHVLAGNHDHLGNVS---------------AQIAYSKISKRWNFPS---------------PYYRLRFKIPRSNV 127 (302)
T ss_dssp GTTCCEEECCCHHHHHSCHH---------------HHHHGGGTSTTEECCS---------------SSEEEEEECTTSSC
T ss_pred hcCCceEEeecccccccccc---------------cccchhhccccccCCC---------------cccceeecccCCCC
Confidence 57899999999999853210 0000011223333332 3666654 4
Q ss_pred cEEEEEEeCCcc-----------------cCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHH
Q 006938 358 VVHFVYISTETN-----------------FLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRML 420 (625)
Q Consensus 358 ~v~fI~LDT~~~-----------------~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~ 420 (625)
.++|+++|+... ...+++|++||+++|++ .+.+|+||++|+|+|+...+... ...+
T Consensus 128 ~~~~~~ldt~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~~~~~~~~~~----~~~~ 200 (302)
T d1utea_ 128 SVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPVWSIAEHGPT----HCLV 200 (302)
T ss_dssp EEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCSSCCSSSCCC----HHHH
T ss_pred cEEEEEccceeEeecccccccccccccccchhHHHHHHHHHHHHHh---hccCceEEEEeccccccCCCCCc----hhhh
Confidence 799999997410 01146899999999998 46789999999999987665543 3457
Q ss_pred HHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 006938 421 EHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPM 500 (625)
Q Consensus 421 ~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ 500 (625)
+.|.+||.+++|++||+||+|.|+|+.+ ++++.||++|+||...... .+........+.
T Consensus 201 ~~~~~ll~~~~v~~~~~GH~H~~~r~~~----------------~~~~~~i~~g~g~~~~~~~-----~~~~~~~~~~~~ 259 (302)
T d1utea_ 201 KQLLPLLTTHKVTAYLCGHDHNLQYLQD----------------ENGLGFVLSGAGNFMDPSK-----KHLRKVPNGYLR 259 (302)
T ss_dssp HHTHHHHHHTTCSEEEECSSSSEEEEEC----------------TTCCEEEEECBSSCCCCCC-----TTGGGSCTTCEE
T ss_pred hhhhHHHHhcCceEEEeCCCcceEEEec----------------CCccEEEEeCCCCCCCCCc-----cccccCCCcccc
Confidence 8899999999999999999999999863 3678899999888653221 000000000111
Q ss_pred cc-ceeeCcccEEEEEEeCCEEEEEEEECCCCcEEEEEEEEe
Q 006938 501 RS-LYRGGEFGYTRLVATKEKLTLSYVGNHDGEVHDMVEILA 541 (625)
Q Consensus 501 ws-~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v~D~f~I~k 541 (625)
+. ......+||++|+|++++|+++|+. .+|+++|+++|.+
T Consensus 260 ~~~~~~~~~~gf~~~~v~~~~l~~~~~~-~~G~~~~~~~~~~ 300 (302)
T d1utea_ 260 FHFGAENSLGGFAYVEITPKEMSVTYIE-ASGKSLFKTKLPR 300 (302)
T ss_dssp EEECCTTSCCEEEEEEECSSCEEEEEEE-TTSCEEEEEEECC
T ss_pred eeecccCCcceEEEEEEECCEEEEEEEe-CCCCEEEEEEecC
Confidence 11 1224678999999999999999994 7999999999964
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.87 E-value=7.8e-22 Score=197.31 Aligned_cols=247 Identities=13% Similarity=0.084 Sum_probs=152.1
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhh--cCC
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVA--SRV 287 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~--~~i 287 (625)
..++|+.++|+|.......... .....+.++.++++++++..+|||||++||++.. +...+|+.+.+.+.++. ..+
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~~~-~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~-g~~~~~~~~~~~l~~~~~~~~~ 80 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRLYG-AVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK-GEPAAYRKLRGLVEPFAAQLGA 80 (256)
T ss_dssp CSEEEEEECCCCBC-----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSS-CCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEEEeeCccCCCCccccc-CcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC-CChhHHHHHHHHhhhhhhhcCC
Confidence 3689999999997543211100 1122456777888888777899999999999965 44566777777776553 468
Q ss_pred ceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCC
Q 006938 288 AYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTE 367 (625)
Q Consensus 288 P~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~ 367 (625)
|+++++||||... .+...+..... .....+|++..++++|++|||.
T Consensus 81 p~~~v~GNHD~~~------------------------~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ldt~ 126 (256)
T d2hy1a1 81 ELVWVMGNHDDRA------------------------ELRKFLLDEAP----------SMAPLDRVCMIDGLRIIVLDTS 126 (256)
T ss_dssp EEEECCCTTSCHH------------------------HHHHHTTCCCC----------CCSCCCEEEEETTEEEEECCCB
T ss_pred CEEEEcccccchh------------------------hhhhhhccccc----------cccccceEEEecccceeeeeee
Confidence 9999999999531 01111211100 1234578899999999999986
Q ss_pred ccc----CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCc
Q 006938 368 TNF----LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRY 443 (625)
Q Consensus 368 ~~~----~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~y 443 (625)
... ....+|++||++.|++.. ...+||++|+|++.......+. ......+.+..++++++|+++|+||.|..
T Consensus 127 ~~~~~~g~~~~~~~~wl~~~L~~~~---~~~~iv~~Hhpp~~~~~~~~~~-~~~~~~~~~~~i~~~~~v~~~~~GH~H~~ 202 (256)
T d2hy1a1 127 VPGHHHGEIRASQLGWLAEELATPA---PDGTILALHHPPIPSVLDMAVT-VELRDQAALGRVLRGTDVRAILAGHLHYS 202 (256)
T ss_dssp CTTCSSBCCCHHHHHHHHHHHTSCC---TTCEEEECSSCSSCCSSHHHHT-TSBCCHHHHHHHHTTSSEEEEEECSSSSC
T ss_pred ecCCcCCcccHHHHHHHHHHHHhhh---ccCceeeeecCCcccccccccc-cccccHHHHHHHHhccCceEEEccccchh
Confidence 432 235789999999998742 2347888999988654211000 00112467888999999999999999976
Q ss_pred eeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEeCCEEEE
Q 006938 444 ERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTL 523 (625)
Q Consensus 444 eR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~ 523 (625)
.... .+|..++++|+........+ .+.-........||..|+++++.+..
T Consensus 203 ~~~~-----------------~~gi~~~~~~s~~~~~~~~~-------------~~~~~~~~~~~~g~~lv~v~~d~~~~ 252 (256)
T d2hy1a1 203 TNAT-----------------FVGIPVSVASATCYTQDLTV-------------AAGGTRGRDGAQGCNLVHVYPDTVVH 252 (256)
T ss_dssp EEEE-----------------ETTEEEEECCCCC--------------------------------CEEEEEECSSCEEE
T ss_pred hceE-----------------ECCEEEEEcCCccccccccC-------------CCCCcccccCCCCEEEEEEECCCEEE
Confidence 5432 14555666554322111000 00011112356799999999888887
Q ss_pred EEE
Q 006938 524 SYV 526 (625)
Q Consensus 524 ~~i 526 (625)
+++
T Consensus 253 ~~i 255 (256)
T d2hy1a1 253 SVI 255 (256)
T ss_dssp EEE
T ss_pred EeC
Confidence 765
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.83 E-value=2.2e-20 Score=163.74 Aligned_cols=96 Identities=21% Similarity=0.323 Sum_probs=81.8
Q ss_pred CCCCceeEEEEecCCC-CceEEEEEecC-CCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 97 DGTGPRAGALGFTEDA-SEMRVMFLAED-GEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~-~~~~V~W~T~~-~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
+.++|+||||++++++ ++|+|+|.|.+ ...+.|+||++++.+...+.+...+|.. ++...+|+|+|
T Consensus 15 ~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~~~~~~~~~------------~~~~~~~~h~v 82 (112)
T d2qfra1 15 GYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRF------------FNYSSGFIHHT 82 (112)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEECEEECCBC------------SSCBCCEEEEE
T ss_pred CCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEEEEEEEEEe------------cccCCcEEEEE
Confidence 5688999999999874 89999999975 5679999999998888888777666532 22346799999
Q ss_pred EEcCCCCCcEEEEEEecCCCCcceeEEEEcCC
Q 006938 175 VIKGLKKGVRYYYKVGSDSKGWSETHSFVSRN 206 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~~~~S~~~~F~T~p 206 (625)
+|+||+|||+|+|||+++ +||++++|+|+|
T Consensus 83 ~Lt~L~P~T~Y~YrVG~~--~~S~~~~F~T~P 112 (112)
T d2qfra1 83 TIRKLKYNTKYYYEVGLR--NTTRRFSFITPP 112 (112)
T ss_dssp EECSCCTTCEEEEEECCS--SSCEEEEEECCC
T ss_pred EECCCCCCCEEEEEECCC--CceeeEEEEcCC
Confidence 999999999999999974 699999999987
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.82 E-value=1.8e-19 Score=181.34 Aligned_cols=248 Identities=17% Similarity=0.093 Sum_probs=151.2
Q ss_pred ceEEEEEecCCCCCCCc------ccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC-----chhhHHHHHHhH
Q 006938 212 TIAFLFGDMGAATPYTT------FERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG-----YSWLWDEFFALI 280 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~------~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g-----~~~~wd~f~~~l 280 (625)
++|++++|+|....... ..+....+...++.+++.+++ .+|||||++||+++... ....|+.+.+.+
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~--~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRR--ERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL 81 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhh--CCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHH
Confidence 79999999997643211 111122345566666766664 68999999999986432 112333333333
Q ss_pred HHhhcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccc-cccccccccCCCCCCCCCCCCCCCCCceEEEEeCcE
Q 006938 281 EPVASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECG-VPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVV 359 (625)
Q Consensus 281 ~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~-~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v 359 (625)
+ ...+|+++++||||......... ... ..... .... ......+. ......+.+..+++
T Consensus 82 ~--~~~~p~~~v~GNHD~~~~~~~~~--~~~-~~~~~--~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~ 140 (320)
T d2nxfa1 82 D--ACSVDVHHVWGNHEFYNFSRPSL--LSS-RLNSA--QRTGTDTGSDLIG--------------DDIYAYEFSPAPNF 140 (320)
T ss_dssp H--TTCSEEEECCCHHHHHHCCHHHH--HTS-TTCCC--C------CEECGG--------------GTCCCEEEEEETTE
T ss_pred H--HcCCCEEEecccCccccccchhc--ccc-cccch--hhhcccccccccC--------------CCCccceeecCCCe
Confidence 3 24799999999999753210000 000 00000 0000 00000010 01234567788999
Q ss_pred EEEEEeCCcc----------------------------------------------cCCChHHHHHHHHHhhccccCCCC
Q 006938 360 HFVYISTETN----------------------------------------------FLQGSNQYNFIKHDLESVDRKKTP 393 (625)
Q Consensus 360 ~fI~LDT~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~r~~~~ 393 (625)
+|+.+|+... ...+.+|++||+++|+++.++ ..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~-~~ 219 (320)
T d2nxfa1 141 RFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QE 219 (320)
T ss_dssp EEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TC
T ss_pred EEEEecCcccccccccccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhhc-CC
Confidence 9999986411 012478999999999876533 35
Q ss_pred eEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc-CceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEE
Q 006938 394 FVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN-NVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIV 472 (625)
Q Consensus 394 wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky-~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv 472 (625)
++|+++|+|++......... ....+++..+|.+| +|+++|+||+|.+++... .+|..||+
T Consensus 220 ~viv~~H~p~~~~~~~~~~~---~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~~----------------~~g~~~i~ 280 (320)
T d2nxfa1 220 RVLIFSHLPVHPCAADPICL---AWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD----------------SSGAQHIT 280 (320)
T ss_dssp EEEEEESSCCCTTSSCGGGS---CTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC----------------TTSCEEEE
T ss_pred ceEEEECCCCccCCCCCccc---hhhHHHHHHHHHhCCCeeEEEeCCcCCcCeeec----------------cCCCEEEE
Confidence 68999999998765432211 11246788899998 599999999999876531 36677887
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEeCCEEEEEEEE
Q 006938 473 IGMAGQDWQPIWQPRPDHPDDPVFPQPMRSLYRGGEFGYTRLVATKEKLTLSYVG 527 (625)
Q Consensus 473 ~G~gG~~~~~~~~~~~~~~~~~~~~~p~ws~~~~~~~Gy~~v~v~~~~L~~~~i~ 527 (625)
+|+.... .....+|.++++.+++|.++-++
T Consensus 281 ~~~~~~~-------------------------~~~~~~~~~~~v~~d~~~~~~~~ 310 (320)
T d2nxfa1 281 LEGVIET-------------------------PPHSHAFATAYLYEDRMVMKGRG 310 (320)
T ss_dssp CCCGGGC-------------------------CTTSCEEEEEEECSSEEEEEEEE
T ss_pred CCeeecC-------------------------CCCCCCEEEEEEECCEEEEEEec
Confidence 7643211 01235899999999999998775
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.82 E-value=3.5e-19 Score=179.72 Aligned_cols=196 Identities=14% Similarity=0.100 Sum_probs=128.5
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+|+.++|+|.......... .......++.+++.++++.++||+||++||+++.+ ....|+.+.+.++.+ .+|++++
T Consensus 2 ~i~hiSD~Hl~~~~~~~~~-~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~-~~~~y~~~~~~l~~l--~~p~~~i 77 (271)
T d3d03a1 2 LLAHISDTHFRSRGEKLYG-FIDVNAANADVVSQLNALRERPDAVVVSGDIVNCG-RPEEYQVARQILGSL--NYPLYLI 77 (271)
T ss_dssp EEEEECCCCBCSTTCCBTT-TBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSC-CHHHHHHHHHHHTTC--SSCEEEE
T ss_pred EEEEEecCcCCCCcccccc-CcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCC-cchhHHHHHHHHhcc--CCCEEEE
Confidence 6899999997654321111 11234456677777777678999999999999754 455666666666543 7899999
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCccc--
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETNF-- 370 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~~-- 370 (625)
+||||.... +. + .+...+..... ......|.++.++++||+|||....
T Consensus 78 ~GNHD~~~~------------~~-----~---~~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~ldt~~~~~~ 127 (271)
T d3d03a1 78 PGNHDDKAL------------FL-----E---YLQPLCPQLGS----------DANNMRCAVDDFATRLLFIDSSRAGTS 127 (271)
T ss_dssp CCTTSCHHH------------HH-----H---HHGGGSGGGCS----------CGGGCCEEECSSSSEEEECCCCCTTCS
T ss_pred ecCccchHH------------HH-----H---Hhhhhhhcccc----------ccCcceEEEecCCeEEEecccccCCCC
Confidence 999997421 00 0 00011110000 1123567788899999999986432
Q ss_pred --CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHc-CceEEEEcCccCceee
Q 006938 371 --LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVEN-NVTLALWGHVHRYERF 446 (625)
Q Consensus 371 --~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky-~VdlvlsGH~H~yeR~ 446 (625)
...++|++||+++|++.. +. ++||++|||++.......+. ......++|.++|.++ +|+++|+||.|.....
T Consensus 128 ~~~l~~~ql~wL~~~L~~~~--~~-~~iv~~Hh~p~~~~~~~~d~-~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (271)
T d3d03a1 128 KGWLTDETISWLEAQLFEGG--DK-PATIFMHHPPLPLGNAQMDP-IACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (271)
T ss_dssp SBCCCHHHHHHHHHHHHHHT--TS-CEEEEESSCSSCCSCTTTGG-GSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred cceecHHHHHHHHHHHhhhc--cc-eeEEEeccCccccCcccccc-ccccchHHHHHHHHhcCCeEEEEeCCcchhhce
Confidence 236899999999998743 33 37778888887665433221 1112246788899998 7999999999986655
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.82 E-value=4.6e-20 Score=163.46 Aligned_cols=96 Identities=17% Similarity=0.245 Sum_probs=82.2
Q ss_pred CCCCceeEEEEecCCC-CceEEEEEecC--CCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 97 DGTGPRAGALGFTEDA-SEMRVMFLAED--GEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~-~~~~V~W~T~~--~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
+.+.|+||||++++++ ++|+|+|+|.. ...+.|+||+.++.+...+.+.+.+|...++ ..+|+|+
T Consensus 21 ~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~------------~~~~~H~ 88 (119)
T d1xzwa1 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNY------------TSAFIHH 88 (119)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTE------------ECCEEEE
T ss_pred CCCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccc------------cCCeEEE
Confidence 5678999999999874 89999999954 4567999999998888888888777764332 2579999
Q ss_pred EEEcCCCCCcEEEEEEecCCCCcceeEEEEcCC
Q 006938 174 AVIKGLKKGVRYYYKVGSDSKGWSETHSFVSRN 206 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~~~~~S~~~~F~T~p 206 (625)
|+|+||+|||+|+|||+++ +||++++|+|+|
T Consensus 89 v~LtgL~P~T~Y~YrVG~~--~~S~~~~F~T~P 119 (119)
T d1xzwa1 89 CTIKDLEYDTKYYYRLGFG--DAKRQFWFVTPP 119 (119)
T ss_dssp EEECCCCTTCEEEEEECCG--GGCEEEEEECCC
T ss_pred EEECCCCCCCEEEEEECCC--CccceEEEeCCC
Confidence 9999999999999999974 699999999987
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.60 E-value=5.8e-15 Score=142.19 Aligned_cols=176 Identities=10% Similarity=0.064 Sum_probs=112.4
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++||.+.. .+.++++++.+.+ .++|+|+++||++.......++..+++.+.. ..+|++++
T Consensus 7 ~i~~~sd~hg~-------------~eale~~~~~~~~--~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~--~~~pv~~i 69 (228)
T d1uf3a_ 7 YILATSNPMGD-------------LEALEKFVKLAPD--TGADAIALIGNLMPKAAKSRDYAAFFRILSE--AHLPTAYV 69 (228)
T ss_dssp EEEEEECCTTC-------------HHHHHHHHTHHHH--HTCSEEEEESCSSCTTCCHHHHHHHHHHHGG--GCSCEEEE
T ss_pred EEEEEeCCCCC-------------HHHHHHHHHHHhh--cCCCEEEECCCCCCCCccchHHHHhhhhhcc--ccceEEEE
Confidence 57899999876 4567778877765 4899999999999766655566666655543 37899999
Q ss_pred cCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCcc---
Q 006938 293 IGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTETN--- 369 (625)
Q Consensus 293 ~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~~--- 369 (625)
+||||..... . +.. .+......+... .....+.+..+++.++.++....
T Consensus 70 ~GNHD~~~~~--------~--~~~--------~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (228)
T d1uf3a_ 70 PGPQDAPIWE--------Y--LRE--------AANVELVHPEMR----------NVHETFTFWRGPYLVAGVGGEIADEG 121 (228)
T ss_dssp CCTTSCSHHH--------H--HHH--------HHHHHHHCTTEE----------ECBTSEEEETTTEEEEEECSEEESSS
T ss_pred ecCCCchhhh--------h--hhh--------hccccccccccc----------ccceeeeeccCCEEEEecCCccccCc
Confidence 9999974110 0 000 000000000000 01123456677888888765321
Q ss_pred -------cCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccC
Q 006938 370 -------FLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHR 442 (625)
Q Consensus 370 -------~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ 442 (625)
.....+|.+|+++.++... ..+.|+++|+|++........ .+.+..++++++++++++||+|.
T Consensus 122 ~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~il~~H~p~~~~~~~~~~-------~~~~~~~~~~~~~~lvl~GH~H~ 191 (228)
T d1uf3a_ 122 EPEEHEALRYPAWVAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQG-------SHEVAHLIKTHNPLLVLVAGKGQ 191 (228)
T ss_dssp CCBSSSSCEEEHHHHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTTS-------BHHHHHHHHHHCCSEEEECCSSC
T ss_pred CcchhhhhhhhHHHHHHHHHHHhhcc---CCceEEEEeeeccCccccccc-------cHHHHHHHHhcCCcEEEEccccc
Confidence 0124678999999887632 234788899998765432222 13466778889999999999997
Q ss_pred c
Q 006938 443 Y 443 (625)
Q Consensus 443 y 443 (625)
.
T Consensus 192 ~ 192 (228)
T d1uf3a_ 192 K 192 (228)
T ss_dssp E
T ss_pred c
Confidence 4
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.53 E-value=2e-14 Score=140.62 Aligned_cols=188 Identities=10% Similarity=0.046 Sum_probs=102.9
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHH--------------
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEF-------------- 276 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f-------------- 276 (625)
+.|+++++|.+..- ..++.+++.+.+ .+||+||++||+++.......|...
T Consensus 2 ~~ri~~isD~h~~~-------------~~l~~l~~~~~~--~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (257)
T d2yvta1 2 PRKVLAIKNFKERF-------------DLLPKLKGVIAE--KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHE 66 (257)
T ss_dssp CCEEEEEECCTTCG-------------GGHHHHHHHHHH--HCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHH
T ss_pred CcEEEEEeCCCCCH-------------HHHHHHHHHHhh--cCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeecc
Confidence 36899999998641 134556665554 4899999999999754333222211
Q ss_pred ---------HHhHHHh-hcCCceEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCC
Q 006938 277 ---------FALIEPV-ASRVAYHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPA 346 (625)
Q Consensus 277 ---------~~~l~~~-~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~ 346 (625)
...++.+ ...+|+++++||||..... +.. ..+......+.. .
T Consensus 67 ~~n~d~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~~-----------~~~-------~~~~~~~~~~~~----------~ 118 (257)
T d2yvta1 67 NEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKI-----------FLR-------AAYEAETAYPNI----------R 118 (257)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHH-----------HHH-------HHHHTTTTCTTE----------E
T ss_pred ccccchhhHHHHHHHHHhcCCcEEEEeCCCcchhhH-----------HHH-------Hhcccccccccc----------c
Confidence 1112222 2468999999999963110 000 000000000000 0
Q ss_pred CCCceEEEEeCcEEEEEEeCCcccC---------CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhH
Q 006938 347 TRNLYYSFDMGVVHFVYISTETNFL---------QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRN 417 (625)
Q Consensus 347 ~~~~yYsfd~G~v~fI~LDT~~~~~---------~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~ 417 (625)
.....+.+..+++.|+.+++..... ....+..|++..++. .+....|+++|+|++.............
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp~~~~~~~~~~~~~~ 195 (257)
T d2yvta1 119 VLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNE---LKPRRLVTIFYTPPIGEFVDRTPEDPKH 195 (257)
T ss_dssp ECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEHHHHHHHGGGGGG---SCCCEEEEEESSCCSCSSTTCBTTBSCC
T ss_pred cccceeEEecCCeEEEEeccccCCccccchhhhhhhhhHHHHHHHHhhh---cccccEEEEEccccccccccccccchhh
Confidence 0112334455777787776532110 123344555555544 3344589999999976433211110001
Q ss_pred HHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 418 RMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 418 ~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
...+.+..++++++++++++||.|...
T Consensus 196 ~g~~~l~~~l~~~~~~~~~~GHiH~~~ 222 (257)
T d2yvta1 196 HGSAVVNTIIKSLNPEVAIVGHVGKGH 222 (257)
T ss_dssp CSCHHHHHHHHHHCCSEEEECSSCCEE
T ss_pred hhhHHHHHhhhhcCCcEEEEEeecCCe
Confidence 113467788899999999999999743
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.04 E-value=1.5e-08 Score=95.94 Aligned_cols=84 Identities=18% Similarity=0.219 Sum_probs=57.6
Q ss_pred HHHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 006938 421 EHLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPM 500 (625)
Q Consensus 421 ~~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~ 500 (625)
+.+..++.+.++|++++||+|...... .++.++|--|+.|......+ +
T Consensus 109 ~~l~~~~~~~~~dvvi~GHTH~~~~~~-----------------~~g~~~iNPGSvg~pr~~~~--------------~- 156 (193)
T d2a22a1 109 GSLEQWQRRLDCDILVTGHTHKLRVFE-----------------KNGKLFLNPGTATGAFSALT--------------P- 156 (193)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCCEEEE-----------------ETTEEEEECCCSSCCCCTTS--------------T-
T ss_pred HHHHHHHhhcCCCEEEEcCccCceEEE-----------------ECCEEEEECCCCCcCcCCCC--------------C-
Confidence 345667788899999999999965432 15666777788775532110 0
Q ss_pred ccceeeCcccEEEEEEeCCEEEEEEEECCCCcE-EEEEEEEe
Q 006938 501 RSLYRGGEFGYTRLVATKEKLTLSYVGNHDGEV-HDMVEILA 541 (625)
Q Consensus 501 ws~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v-~D~f~I~k 541 (625)
+...+|.+++++++++++++|.-.+|++ ++..++.|
T Consensus 157 -----~~~~syaild~~~~~v~v~~y~l~~~~~~~~~~~~~~ 193 (193)
T d2a22a1 157 -----DAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSEFSK 193 (193)
T ss_dssp -----TCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred -----CCCCEEEEEEEECCEEEEEEEEecCCeEEEEEEEEeC
Confidence 1234799999999999999987666654 56655543
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.96 E-value=2.4e-08 Score=93.57 Aligned_cols=84 Identities=17% Similarity=0.142 Sum_probs=57.9
Q ss_pred HHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 006938 422 HLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMR 501 (625)
Q Consensus 422 ~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~w 501 (625)
.+..++.+.++|++++||+|...... .+++++|--|+.|.+..... .
T Consensus 98 ~l~~~~~~~~~divi~GHTH~p~~~~-----------------~~~~~~iNPGSv~~pr~~~~--------------~-- 144 (182)
T d1z2wa1 98 SLALLQRQFDVDILISGHTHKFEAFE-----------------HENKFYINPGSATGAYNALE--------------T-- 144 (182)
T ss_dssp HHHHHHHHHSSSEEECCSSCCCEEEE-----------------ETTEEEEECCCTTCCCCSSC--------------S--
T ss_pred HHHHHHhccCCCEEEECCcCcceEEE-----------------ECCEEEEeCCCCCCCCCCCC--------------C--
Confidence 45566777899999999999864332 15667777777665422110 0
Q ss_pred cceeeCcccEEEEEEeCCEEEEEEEECCCCcE-EEEEEEEec
Q 006938 502 SLYRGGEFGYTRLVATKEKLTLSYVGNHDGEV-HDMVEILAS 542 (625)
Q Consensus 502 s~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v-~D~f~I~k~ 542 (625)
+....|.+++++++++++..+.-.++++ +++++..|+
T Consensus 145 ----~~~~syaild~~~~~v~~~~~~l~~~~v~~~~~~~~~~ 182 (182)
T d1z2wa1 145 ----NIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182 (182)
T ss_dssp ----CCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECC
T ss_pred ----CCCCEEEEEEEeCCEEEEEEEEecCCcEEEEEEEEEcC
Confidence 1234799999999999999886556664 778787664
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.95 E-value=4.3e-08 Score=91.00 Aligned_cols=71 Identities=21% Similarity=0.296 Sum_probs=51.5
Q ss_pred HHHHHHHHcCceEEEEcCccCceeeeccCCccccCCCCCCCCCCCCcEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 006938 422 HLEPLFVENNVTLALWGHVHRYERFCPLNNFTCGSMGMDGEPSEAFPVHIVIGMAGQDWQPIWQPRPDHPDDPVFPQPMR 501 (625)
Q Consensus 422 ~l~~l~~ky~VdlvlsGH~H~yeR~~p~~~~~~~~~~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~p~w 501 (625)
.+..++.+.++|++++||+|...... .++.++|.-|+-|.+...
T Consensus 93 ~l~~~~~~~~~dvvi~GHTH~p~~~~-----------------~~~~~~iNPGSvg~pr~~------------------- 136 (173)
T d3ck2a1 93 KLDYWAQEEEAAICLYGHLHVPSAWL-----------------EGKILFLNPGSISQPRGT------------------- 136 (173)
T ss_dssp HHHHHHHHTTCSEEECCSSCCEEEEE-----------------ETTEEEEEECCSSSCCTT-------------------
T ss_pred HHHHHHHhcCCCEEEeCCcCcceEEE-----------------ECCEEEEECCCCCCCCCC-------------------
Confidence 35566777899999999999855432 266788888888765211
Q ss_pred cceeeCcccEEEEEEeCCEEEEEEEECCCCcE
Q 006938 502 SLYRGGEFGYTRLVATKEKLTLSYVGNHDGEV 533 (625)
Q Consensus 502 s~~~~~~~Gy~~v~v~~~~L~~~~i~~~dG~v 533 (625)
.....|.+++++++.++++++ +-++++
T Consensus 137 ----~~~~syail~~~~~~~~v~~~-~~d~~~ 163 (173)
T d3ck2a1 137 ----IRECLYARVEIDDSYFKVDFL-TRDHEV 163 (173)
T ss_dssp ----CCSCCEEEEEECSSEEEEEEE-CTTSCB
T ss_pred ----CCCCEEEEEEEeCCEEEEEEE-EeCCeE
Confidence 122369999999999999999 456654
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.86 E-value=1.6e-09 Score=105.12 Aligned_cols=72 Identities=14% Similarity=0.213 Sum_probs=49.9
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh---CCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCc
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL---GDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVA 288 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~---~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP 288 (625)
.+++++||.|.. ...++.+++.++.. ..++|.++++||+++.+... .+..+.+..+....+
T Consensus 1 v~I~visDiHg~-------------~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~~---~evi~~l~~l~~~~~ 64 (251)
T d1nnwa_ 1 VYVAVLANIAGN-------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYP---KEVIEVIKDLTKKEN 64 (251)
T ss_dssp CEEEEEECCTTC-------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCH---HHHHHHHHHHHHHSC
T ss_pred CEEEEEEccccC-------------HHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCCc---HHHHHHHHHHhhcCC
Confidence 368999999854 23456666666442 35679999999999755332 234555555555668
Q ss_pred eEEccCCCCCC
Q 006938 289 YHVCIGNHEYD 299 (625)
Q Consensus 289 ~~~v~GNHD~~ 299 (625)
+++++||||..
T Consensus 65 v~~v~GNHD~~ 75 (251)
T d1nnwa_ 65 VKIIRGKYDQI 75 (251)
T ss_dssp EEEECCHHHHH
T ss_pred EEEEeccHHHH
Confidence 99999999963
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.72 E-value=7e-09 Score=104.37 Aligned_cols=85 Identities=14% Similarity=0.092 Sum_probs=55.2
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCC-chhhHHHHHHhHHHhh-cCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARG-YSWLWDEFFALIEPVA-SRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g-~~~~wd~f~~~l~~~~-~~iP~~ 290 (625)
||+.++|+|.+................++++++.+.+ .+||+||++||++.... .......+.+.++.+. ..+|++
T Consensus 2 kilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~--~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~ 79 (333)
T d1ii7a_ 2 KFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQ--ENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVF 79 (333)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHH--TTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEE
T ss_pred EEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHH--cCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEE
Confidence 7999999998643211111112234566677666543 68999999999987542 2233344455555553 479999
Q ss_pred EccCCCCCC
Q 006938 291 VCIGNHEYD 299 (625)
Q Consensus 291 ~v~GNHD~~ 299 (625)
+++||||..
T Consensus 80 ~i~GNHD~~ 88 (333)
T d1ii7a_ 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCCCccc
Confidence 999999975
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.58 E-value=3.3e-07 Score=83.90 Aligned_cols=62 Identities=13% Similarity=0.141 Sum_probs=43.7
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
|+++++|.|.. ...++.+++.+++ .++|.|+++||++... . .+.+. ....|++.+
T Consensus 2 kI~iiSDiHgn-------------~~al~~vl~~~~~--~~~D~ii~~GD~~~~~----~----~~~l~--~~~~~~~~v 56 (165)
T d1s3la_ 2 KIGIMSDTHDH-------------LPNIRKAIEIFND--ENVETVIHCGDFVSLF----V----IKEFE--NLNANIIAT 56 (165)
T ss_dssp EEEEECCCTTC-------------HHHHHHHHHHHHH--SCCSEEEECSCCCSTH----H----HHHGG--GCSSEEEEE
T ss_pred EEEEEEeCCCC-------------HHHHHHHHHHHHh--cCCCEEEECCCccCHH----H----HHHHh--hcCccEEEE
Confidence 68999999865 2345666666654 5899999999997421 1 12222 245799999
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 57 ~GN~D~~ 63 (165)
T d1s3la_ 57 YGNNDGE 63 (165)
T ss_dssp CCTTCCC
T ss_pred ccccccc
Confidence 9999974
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.23 E-value=3.8e-06 Score=78.56 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=46.2
Q ss_pred EEEEEecCCCCCC----CcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCce
Q 006938 214 AFLFGDMGAATPY----TTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAY 289 (625)
Q Consensus 214 f~v~GD~g~~~~~----~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~ 289 (625)
+.+++|++.+... ..+.. ..+.-+.+++.+++.-.+.|.|+++||+++..+..+....+ ++.+ .-..
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~----~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~~~~~~---l~~L--~g~~ 74 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVR----FKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRI---WKAL--PGRK 74 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTC----CTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHH---HHHS--SSEE
T ss_pred EEEEeCcCCCCcchhhcCCCCC----HHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHHHHHHH---HHHC--CCce
Confidence 4568999876431 11111 11233456666666546779999999998765433333333 3333 3357
Q ss_pred EEccCCCCCC
Q 006938 290 HVCIGNHEYD 299 (625)
Q Consensus 290 ~~v~GNHD~~ 299 (625)
+.+.||||..
T Consensus 75 ~lI~GNHD~~ 84 (188)
T d1xm7a_ 75 ILVMGNHDKD 84 (188)
T ss_dssp EEECCTTCCC
T ss_pred EEEecCCCch
Confidence 8899999974
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.19 E-value=4.1e-05 Score=70.12 Aligned_cols=71 Identities=8% Similarity=0.124 Sum_probs=45.5
Q ss_pred ceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCc-----hhhHHHHHHhHHHhhcC
Q 006938 212 TIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGY-----SWLWDEFFALIEPVASR 286 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~-----~~~wd~f~~~l~~~~~~ 286 (625)
.|++++||.|.. ...++.+++.+++ .++|.++++||++..+.. ........+.+.. ..
T Consensus 2 Mki~iiSDiHg~-------------~~al~~vl~~~~~--~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~--~~ 64 (184)
T d1su1a_ 2 MKLMFASDIHGS-------------LPATERVLELFAQ--SGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNE--VA 64 (184)
T ss_dssp CEEEEECCCTTB-------------HHHHHHHHHHHHH--HTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHT--TG
T ss_pred cEEEEEeecCCC-------------HHHHHHHHHHHhh--cCCCEEEEcCcccccCccchhhhccCcHHHHHHHHh--cC
Confidence 378999999853 2345666666654 489999999999864321 1111122222221 35
Q ss_pred CceEEccCCCCCC
Q 006938 287 VAYHVCIGNHEYD 299 (625)
Q Consensus 287 iP~~~v~GNHD~~ 299 (625)
.|++.+.||||..
T Consensus 65 ~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 65 HKVIAVRGNCDSE 77 (184)
T ss_dssp GGEEECCCTTCCH
T ss_pred CcEEEecCCCCch
Confidence 6899999999974
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=97.89 E-value=0.00011 Score=74.11 Aligned_cols=91 Identities=14% Similarity=0.065 Sum_probs=45.6
Q ss_pred CcceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHh--CCCCc-EEEEcCccccCCCchhhHHHHHHhHHHhhcC
Q 006938 210 NETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEAL--GDKPA-FVSHIGDISYARGYSWLWDEFFALIEPVASR 286 (625)
Q Consensus 210 ~~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~--~~~pd-fvl~~GDivy~~g~~~~wd~f~~~l~~~~~~ 286 (625)
.+++|+...|+|..-...............++.++..+++. +.+++ +++.+||++...........--+.+-.++..
T Consensus 10 ~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn~ 89 (322)
T d3c9fa2 10 NDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIK 89 (322)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTT
T ss_pred CEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHHHHhc
Confidence 46899999999975321111100111122233333333221 24555 6678999986432110000001223344566
Q ss_pred Cce-EEccCCCCCCC
Q 006938 287 VAY-HVCIGNHEYDW 300 (625)
Q Consensus 287 iP~-~~v~GNHD~~~ 300 (625)
+++ .+++||||++.
T Consensus 90 lgyDa~t~GNHEfd~ 104 (322)
T d3c9fa2 90 QDYDLLTIGNHELYL 104 (322)
T ss_dssp SCCSEECCCGGGSSS
T ss_pred cCCcEEeecceeccc
Confidence 776 77899999963
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.75 E-value=0.00045 Score=69.85 Aligned_cols=89 Identities=12% Similarity=0.269 Sum_probs=47.6
Q ss_pred ceEEEEeCcEE--EEEEeCCcc-------------cCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChh
Q 006938 350 LYYSFDMGVVH--FVYISTETN-------------FLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAP 414 (625)
Q Consensus 350 ~yYsfd~G~v~--fI~LDT~~~-------------~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~ 414 (625)
.|.-++.++++ ||.+-+... +....+..+-..++|++. .+...+|++.|.+............
T Consensus 129 py~I~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~ 206 (337)
T d1usha2 129 PWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAP 206 (337)
T ss_dssp SEEEEEETTEEEEEEEEECTTTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCC
T ss_pred ceeeeecCCeEEEeecccccccccccCcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccc
Confidence 45667888865 466644210 001122333333445432 3567799999998765432221111
Q ss_pred hhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 415 LRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 415 ~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
.. ..+...+...+||+++.||.|...
T Consensus 207 ~~----~~la~~~~~~~vD~IvgGHsH~~~ 232 (337)
T d1usha2 207 GD----VEMARALPAGSLAMIVGGHSQDPV 232 (337)
T ss_dssp CH----HHHHHHSCTTSSSEEECCSSCCBC
T ss_pred hh----HHHHHhCcccCceEEecCccCccc
Confidence 11 122233334589999999999753
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=96.91 E-value=0.0086 Score=59.07 Aligned_cols=87 Identities=15% Similarity=0.069 Sum_probs=44.4
Q ss_pred ceEEEEEecCCCCCCCccc----ccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCC
Q 006938 212 TIAFLFGDMGAATPYTTFE----RTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRV 287 (625)
Q Consensus 212 ~~f~v~GD~g~~~~~~~~~----~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~i 287 (625)
++++.+.|+|..-....+. ...-.....+..+++++++..+ --+++.+||++..... ..+..-...++-+..--
T Consensus 3 l~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~-~~l~ldaGD~~~Gs~~-~~~~~g~~~~~~~n~~g 80 (302)
T d2z1aa2 3 LTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAK-NPLFLDAGDVFQGTLY-FNQYRGLADRYFMHRLR 80 (302)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSS-SEEEEECSCCSSSSHH-HHHHTTHHHHHHHHHTT
T ss_pred EEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCC-CeEEEEcCCCCCCCHh-HhhhcchhHHHHHHhcc
Confidence 4678888988643110000 0011124456667777665432 3689999999854321 11111111122222223
Q ss_pred ceEEccCCCCCCC
Q 006938 288 AYHVCIGNHEYDW 300 (625)
Q Consensus 288 P~~~v~GNHD~~~ 300 (625)
.=..++||||+++
T Consensus 81 yDa~~~GNHEfd~ 93 (302)
T d2z1aa2 81 YRAMALGNHEFDL 93 (302)
T ss_dssp CCEEECCGGGGTT
T ss_pred cccccccchhhhc
Confidence 3466899999974
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.84 E-value=0.0012 Score=53.64 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=29.6
Q ss_pred EEEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~ 207 (625)
+++|+||+|+|.|.+||... .+.||+...|+|.|+
T Consensus 56 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~PP 94 (94)
T d1x5aa1 56 RVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP 94 (94)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEeCCC
Confidence 56799999999999999963 256899999999873
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.72 E-value=0.0032 Score=51.05 Aligned_cols=86 Identities=9% Similarity=0.100 Sum_probs=55.8
Q ss_pred CCceeEEEEecCCCCceEEEEEecCCC-------ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDGE-------KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~~-------~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
..|..+++..-. ++++.|.|...... .-.|+|....+..... ..... ....
T Consensus 4 ~pP~~l~v~~~~-~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~------------------~~~~ 61 (104)
T d2b5ib2 4 MAPISLQVVHVE-THRCNISWEISQASHYFERHLEFEARTLSPGHTWEEA---PLLTL------------------KQKQ 61 (104)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTS---CCEEE------------------CSCC
T ss_pred CCCCCcEEEEEe-CCEEEEEEccccccccccceeEEEEEEecccccceee---eEEec------------------CCCc
Confidence 358888887774 57999999765321 2457776655432210 00000 1122
Q ss_pred EEEEEcCCCCCcEEEEEEecC---C-----CCcceeEEEEcCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD---S-----KGWSETHSFVSRN 206 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~---~-----~~~S~~~~F~T~p 206 (625)
..+.|+||+|+|.|.+||... + +.||+...|+|.|
T Consensus 62 ~~~~i~~L~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 62 EWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp CEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 456789999999999999962 1 2567889999987
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.51 E-value=0.0037 Score=49.88 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=28.5
Q ss_pred EEEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p~ 207 (625)
..+|++|+|++.|.+||..- .+.||+...|+|+|.
T Consensus 55 ~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~Tpps 93 (93)
T d1x4xa1 55 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPS 93 (93)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEcccceeeEEEEEEEEEECCcCcCCCCcEEEEeCCC
Confidence 35689999999999999863 246888899999763
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.0088 Score=48.23 Aligned_cols=84 Identities=24% Similarity=0.262 Sum_probs=54.4
Q ss_pred CceeEEEEecCC-CCceEEEEEecCCC---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEE
Q 006938 100 GPRAGALGFTED-ASEMRVMFLAEDGE---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAV 175 (625)
Q Consensus 100 ~P~qv~L~~~~~-~~~~~V~W~T~~~~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ 175 (625)
.|.++.++.... ++++.|+|.....+ .-.|+|....+..... .... ++-...++
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~----~~~v------------------~~~~~~~~ 59 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWK----EATI------------------PGHLNSYT 59 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCE----EEEE------------------CSSCCEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccceee----eecc------------------CCCccEEE
Confidence 588888887764 58999999876432 2468888765432110 1111 12335678
Q ss_pred EcCCCCCcEEEEEEecC-CCCcce--eEEEEcC
Q 006938 176 IKGLKKGVRYYYKVGSD-SKGWSE--THSFVSR 205 (625)
Q Consensus 176 ltgL~PgT~Y~YrV~~~-~~~~S~--~~~F~T~ 205 (625)
|+||+|||.|..+|..- ..+.|+ ...|+|.
T Consensus 60 l~gL~P~t~Y~v~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 60 IKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp ECSCCSSEEEEEEEEEEESSSCEEEEEEEEEEC
T ss_pred ECCcccCcEEEEEEEEEeCCCccCcEEEEEEec
Confidence 99999999999999862 223443 4567664
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.44 E-value=0.01 Score=48.34 Aligned_cols=85 Identities=14% Similarity=0.206 Sum_probs=54.6
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC---C---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG---E---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~---~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
..|..+.+....+++.+.+.|..... . .-.|+|.+........ ..... +-..
T Consensus 6 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~----~~~~~------------------~~~t 63 (105)
T d1erna2 6 DAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQ----RVEIL------------------EGRT 63 (105)
T ss_dssp CCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEE----EEEEC------------------TTCC
T ss_pred CCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCceE----EEeec------------------CCcc
Confidence 46889999988878889999986421 1 3578887765432111 01110 0113
Q ss_pred EEEEcCCCCCcEEEEEEecC--C-------CCcceeEEEEcC
Q 006938 173 DAVIKGLKKGVRYYYKVGSD--S-------KGWSETHSFVSR 205 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~--~-------~~~S~~~~F~T~ 205 (625)
.+.|.+|+|+|+|.+||... + +.||+..+++|+
T Consensus 64 ~~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 64 ECVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp EEEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred EEEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 56799999999999999862 1 246777888774
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.38 E-value=0.004 Score=49.58 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=27.9
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
..+++||+|+|.|.+||..-. +.||+...|+|.|
T Consensus 58 ~~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 58 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 466899999999999999632 2478888999976
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.36 E-value=0.011 Score=46.71 Aligned_cols=82 Identities=16% Similarity=0.130 Sum_probs=54.4
Q ss_pred CceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+.+.-. +++++.|.|.-... ..-.|+|........... ... +....++++
T Consensus 4 aP~n~~~~~~-s~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~-----~~~------------------~~~~~~~i~ 59 (92)
T d1qg3a1 4 APQNPNAKAA-GSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAH-----LLD------------------SKVPSVELT 59 (92)
T ss_dssp CCEEEEEEEC-STTCEEEEEECCSSCCCEEEEEEEETTSCGGGCE-----EEE------------------ESSSEEEEC
T ss_pred cCCCCEEEEc-cCCEEEEEEEecCCCccceEEeeeeccccccEEE-----Eec------------------CCccEEEEC
Confidence 4777777655 46899999986542 345688876654322111 110 112467799
Q ss_pred CCCCCcEEEEEEecCC----CCcceeEEEEcC
Q 006938 178 GLKKGVRYYYKVGSDS----KGWSETHSFVSR 205 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~~----~~~S~~~~F~T~ 205 (625)
+|+|+|.|.+||..-. +.+|+...++|.
T Consensus 60 ~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 60 NLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp SCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred CCCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence 9999999999999632 467888888874
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.26 E-value=0.0058 Score=49.42 Aligned_cols=83 Identities=17% Similarity=0.251 Sum_probs=53.2
Q ss_pred CCceeEEEEecCCCCceEEEEEecC--C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED--G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~--~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+++.-.. .+++.|.|.... . ..-.|+|...++...... .+. +....
T Consensus 5 ~~p~~~~~~~~s-~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~-----~~~------------------~~~~~ 60 (98)
T d1x5la1 5 SQVVVIRQERAG-QTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYS-----TLK------------------AVTTR 60 (98)
T ss_dssp CCCCCEECSCBC-SSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCE-----EEE------------------ESSSE
T ss_pred CCCCceEEEecc-CCEEEEEEECCCCCCCCEEEEEEEeecccccceeeE-----Eec------------------CCceE
Confidence 346666655443 688999997543 1 134588877654322211 111 11246
Q ss_pred EEEcCCCCCcEEEEEEecCC----CCcceeEEEEcC
Q 006938 174 AVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSR 205 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~ 205 (625)
.+|+||+|+++|.+||.... +.||+...|+|.
T Consensus 61 ~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 61 ATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EEECSCCTTCEEEECEEEEETTEECCCCCCEEEECC
T ss_pred EEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcC
Confidence 67999999999999998632 468899999985
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.19 E-value=0.0025 Score=59.49 Aligned_cols=66 Identities=18% Similarity=0.249 Sum_probs=45.0
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhHHHhhcCCceEEc
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALIEPVASRVAYHVC 292 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l~~~~~~iP~~~v 292 (625)
+++++||.|.. ...++.+++.+.. ....|-++++||+++.+.... +.++ +....-+.++
T Consensus 14 rI~vIgDIHG~-------------~~~L~~lL~~i~~-~~~~d~lv~lGD~vDrGp~s~------~vl~-~l~~~~~~~i 72 (219)
T d1g5ba_ 14 NIWVVGDLHGC-------------YTNLMNKLDTIGF-DNKKDLLISVGDLVDRGAENV------ECLE-LITFPWFRAV 72 (219)
T ss_dssp CEEEECCCTTC-------------HHHHHHHHHHHTC-CTTTCEEEECSCCSSSSSCHH------HHHG-GGGSTTEEEC
T ss_pred eEEEEEecccC-------------HHHHHHHHHHcCC-CCCCCEEEEeCCccccCccHH------HHHH-Hhhccccccc
Confidence 68899999875 3456667766532 245689999999998665332 1222 2345568899
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 73 ~GNHE~~ 79 (219)
T d1g5ba_ 73 RGNHEQM 79 (219)
T ss_dssp CCHHHHH
T ss_pred cCcHHHH
Confidence 9999963
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.12 E-value=0.016 Score=47.50 Aligned_cols=85 Identities=13% Similarity=0.118 Sum_probs=54.1
Q ss_pred CCceeEEEEecCCCCceEEEEEec--CC----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAE--DG----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~--~~----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
..|..+.+.... ++++.|.|.-. +. ..-.|.|...+........ . ......
T Consensus 12 ~~P~~l~~~~~~-~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----~-----------------~~~~~~ 68 (107)
T d1x5fa1 12 SAPRDVVASLVS-TRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN-----T-----------------SHPGEM 68 (107)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE-----C-----------------SSTTCS
T ss_pred cCCCccEEEEec-CCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEE-----E-----------------eCCCcc
Confidence 458887776653 68999999753 21 1346777665543222110 0 011235
Q ss_pred EEEEcCCCCCcEEEEEEecCC-C---CcceeEEEEcCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS-K---GWSETHSFVSRN 206 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~-~---~~S~~~~F~T~p 206 (625)
.++|++|.|++.|.+||..-. . .+|....++|.|
T Consensus 69 ~~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 69 QVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 688999999999999999743 2 356777888765
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.08 E-value=0.045 Score=42.70 Aligned_cols=72 Identities=14% Similarity=0.181 Sum_probs=47.0
Q ss_pred CceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+.+.-. .++++.|.|..... ..-.|+|....+...... .... ..+-...++|+
T Consensus 3 aP~~l~v~~~-~~~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~-----~~~~---------------~~~~~~~~~i~ 61 (92)
T d1tdqa2 3 APKNLRVGSR-TATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEV-----LVPK---------------GIGPTTKTTLT 61 (92)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEE-----EEEC---------------CSSSEEEEEEC
T ss_pred cCcCCEEEEe-cCCEEEEEEEecCCcccceEEEEEEcCCCcceee-----EEEe---------------cCCCeeEEEEC
Confidence 5888877654 36899999976542 345688877654322111 1100 12345678999
Q ss_pred CCCCCcEEEEEEecC
Q 006938 178 GLKKGVRYYYKVGSD 192 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~ 192 (625)
||+|+|.|.++|..-
T Consensus 62 ~L~p~t~Y~~~V~a~ 76 (92)
T d1tdqa2 62 DLVPGTEYGVGISAV 76 (92)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred CccCCCEEEEEEEEE
Confidence 999999999999863
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.08 E-value=0.015 Score=46.66 Aligned_cols=69 Identities=14% Similarity=0.111 Sum_probs=47.4
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
+..|..++|.-.. .+++.+.|..... ..-.|+|....+....... . ......
T Consensus 3 P~~P~nl~v~~~~-~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-----~-------------------~~~~~~ 57 (95)
T d2b5ic1 3 PWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS-----V-------------------DYRHKF 57 (95)
T ss_dssp CCCCEEEEEEEEE-TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEE-----E-------------------CSSCEE
T ss_pred CcCCCCCEEEEEe-CCEEEEEECCCCCceeEEEEEEEEcCCCceeeEee-----e-------------------ccccee
Confidence 3568888886543 5899999987543 3577999877653222110 0 011367
Q ss_pred EEcCCCCCcEEEEEEec
Q 006938 175 VIKGLKKGVRYYYKVGS 191 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~ 191 (625)
+|.+|+|+|.|.+||.+
T Consensus 58 ~~~~L~p~t~Y~frVRa 74 (95)
T d2b5ic1 58 SLPSVDGQKRYTFRVRS 74 (95)
T ss_dssp EECSCCTTSCEEEEEEE
T ss_pred EcCCCCCCCEEEEEEEE
Confidence 78999999999999986
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.07 E-value=0.01 Score=47.86 Aligned_cols=83 Identities=13% Similarity=0.149 Sum_probs=49.3
Q ss_pred CCceeEEEEecC---CCCceEEEEEecCC-----C----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCccccc
Q 006938 99 TGPRAGALGFTE---DASEMRVMFLAEDG-----E----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWR 166 (625)
Q Consensus 99 ~~P~qv~L~~~~---~~~~~~V~W~T~~~-----~----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~ 166 (625)
..|..+.+.+.. ..+++.|.|..... . .-.++|....+...... ..
T Consensus 4 ~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~------~~---------------- 61 (104)
T d3d48r2 4 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIH------FA---------------- 61 (104)
T ss_dssp CCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEE------EE----------------
T ss_pred cCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeee------cc----------------
Confidence 458888776542 35789999986431 1 23456655544322111 00
Q ss_pred CCceEEEEEEcCCCCCcEEEEEEecC----C-CCcceeEEEEcC
Q 006938 167 DPGWIFDAVIKGLKKGVRYYYKVGSD----S-KGWSETHSFVSR 205 (625)
Q Consensus 167 ~~~~~h~a~ltgL~PgT~Y~YrV~~~----~-~~~S~~~~F~T~ 205 (625)
.....++|.||+|+|.|.+||... . +.||+...++|+
T Consensus 62 --~~~~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 62 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp --ETCSEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred --ccccEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 112356789999999999999962 2 457888888875
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.05 E-value=0.013 Score=47.29 Aligned_cols=83 Identities=13% Similarity=0.170 Sum_probs=51.6
Q ss_pred CCceeEEEEec---CCCCceEEEEEecCC---------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCccccc
Q 006938 99 TGPRAGALGFT---EDASEMRVMFLAEDG---------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWR 166 (625)
Q Consensus 99 ~~P~qv~L~~~---~~~~~~~V~W~T~~~---------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~ 166 (625)
..|..+.+.+. ...+++.|+|..... ..-.|+|...+........ .
T Consensus 4 ~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~------~---------------- 61 (103)
T d1f6fb2 4 EPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHF------T---------------- 61 (103)
T ss_dssp CCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEE------E----------------
T ss_pred CCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeec------c----------------
Confidence 45777776543 346889999986532 1346777766654322110 0
Q ss_pred CCceEEEEEEcCCCCCcEEEEEEecCC-----CCcceeEEEEcC
Q 006938 167 DPGWIFDAVIKGLKKGVRYYYKVGSDS-----KGWSETHSFVSR 205 (625)
Q Consensus 167 ~~~~~h~a~ltgL~PgT~Y~YrV~~~~-----~~~S~~~~F~T~ 205 (625)
.....+++.||+|||.|.+||.... +.||+.-.++|+
T Consensus 62 --~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~P 103 (103)
T d1f6fb2 62 --GHQTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEMP 103 (103)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred --cceeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeECc
Confidence 0113577999999999999999632 346766666653
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.02 E-value=0.0059 Score=48.59 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=28.6
Q ss_pred EEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
..++|+||+|+|.|.+||.... +.||+...|+|.|
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 56 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred cEEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeCC
Confidence 3567999999999999998632 3578888999986
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.98 E-value=0.029 Score=45.99 Aligned_cols=87 Identities=15% Similarity=0.112 Sum_probs=56.5
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCCC-----------ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCccccc
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDGE-----------KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWR 166 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~~-----------~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~ 166 (625)
...|..+++... .+++.|+|...... .-.|+|........... ....
T Consensus 6 P~pP~nl~v~~~--~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~---~~~~----------------- 63 (114)
T d2gysa2 6 PPEPRDLQISTD--QDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAA---ILLS----------------- 63 (114)
T ss_dssp CCCCEEEEEEEE--TTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCE---EEEE-----------------
T ss_pred CCcCCCeEEEEe--CCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEE---Eeec-----------------
Confidence 356888888765 46899999865321 24577776654322211 0000
Q ss_pred CCceEEEEEEcCCCCCcEEEEEEecC---C-------CCcceeEEEEcCCC
Q 006938 167 DPGWIFDAVIKGLKKGVRYYYKVGSD---S-------KGWSETHSFVSRNE 207 (625)
Q Consensus 167 ~~~~~h~a~ltgL~PgT~Y~YrV~~~---~-------~~~S~~~~F~T~p~ 207 (625)
..-...+.+.+|.|++.|..||.+. + +.||+...|+|+|.
T Consensus 64 -~~~~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 64 -NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp -SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred -cCceEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 1123467789999999999999862 1 25788899999874
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.97 E-value=0.025 Score=45.83 Aligned_cols=88 Identities=16% Similarity=0.184 Sum_probs=54.6
Q ss_pred CCceeEEEEec-CCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 99 TGPRAGALGFT-EDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 99 ~~P~qv~L~~~-~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
..|..+.+... ..++++.|.|..... ..-.|.|....+..... -....+ .+-.+
T Consensus 13 ~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~--~~~~~~------------------~~~~~ 72 (111)
T d1x5ka1 13 SPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD--WVIEPV------------------VGNRL 72 (111)
T ss_dssp SCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTT--SEEEEE------------------STTCS
T ss_pred CCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcce--eEEEEe------------------CCCee
Confidence 45777887665 356899999985431 12356666554321110 000111 11223
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
..+|+||+|++.|.+||..-. +.||+...|+|+.
T Consensus 73 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 73 THQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp EEEECSCCSSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 567999999999999999632 4688889998864
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.90 E-value=0.024 Score=45.47 Aligned_cols=87 Identities=11% Similarity=0.093 Sum_probs=54.1
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC------C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG------E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~------~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
..|..+++... ++++++|.|....+ . .-.|.|...++...... ..... .+..
T Consensus 3 ~~P~~~~~~~~-s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~--~~~~~------------------~~~~ 61 (101)
T d1x4ya1 3 AGPYITFTDAV-NETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDY--KKDMV------------------EGDR 61 (101)
T ss_dssp SCCEEEEEECS-SSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGC--CCEEE------------------ETTC
T ss_pred CCCcccEEEEE-cCCEEEEEEecCcccccccceEEEEEEeeeccceeeeee--eEEEE------------------cCCe
Confidence 35777777666 46899999975421 1 23577776543221100 00000 0112
Q ss_pred EEEEEcCCCCCcEEEEEEecC----CCCcceeEEEEcCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSRN 206 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~p 206 (625)
...+|++|+|++.|.+||..- .+.||+...++|..
T Consensus 62 ~~~~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 62 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred eEEEEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 355689999999999999963 25688999998864
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.84 E-value=0.014 Score=47.39 Aligned_cols=74 Identities=12% Similarity=0.157 Sum_probs=47.1
Q ss_pred CCCceEEEEEecC--C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcEE
Q 006938 111 DASEMRVMFLAED--G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRY 185 (625)
Q Consensus 111 ~~~~~~V~W~T~~--~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~Y 185 (625)
+++++.|.|.-.. . ..-.|+|....+........ .+ .+-.+..+|++|+|+|.|
T Consensus 19 ~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~---~~------------------~~~~~~~~i~~L~p~t~Y 77 (105)
T d2d9qb2 19 QAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVG---PL------------------PLEALQYELCGLLPATAY 77 (105)
T ss_dssp CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEE---EE------------------CSCEEEEEECSCCSCCCE
T ss_pred CCCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeee---cc------------------cCCcceeEEecccCCeEE
Confidence 4688999998542 1 23668888765432221110 11 123467789999999999
Q ss_pred EEEEecC----C---CCcceeEEEEcC
Q 006938 186 YYKVGSD----S---KGWSETHSFVSR 205 (625)
Q Consensus 186 ~YrV~~~----~---~~~S~~~~F~T~ 205 (625)
.+||..- . +.||+..+++|.
T Consensus 78 ~frVra~n~~g~G~~S~wS~~~~~~t~ 104 (105)
T d2d9qb2 78 TLQIRCIRWPLPGHWSDWSPSLELRTT 104 (105)
T ss_dssp EEEEEEEECSSCCCCCCCCCCEEECCC
T ss_pred EEEEEEEeCCCCCCCcCCCCCEEEeCC
Confidence 9999862 1 247777777764
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.78 E-value=0.013 Score=47.29 Aligned_cols=87 Identities=16% Similarity=0.147 Sum_probs=52.3
Q ss_pred CCceeEEEEecCCCCceEEEEEecC--CC----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED--GE----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~--~~----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
..|.-..+.. ..+++.|.|.-.. +. .-.|+|....+....... .... . ...-.
T Consensus 4 ~~P~~~~~~~--~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~---~~~~-----------~-----~~~~~ 62 (101)
T d2haza1 4 SSPSIDQVEP--YSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW---YDAK-----------E-----ASMEG 62 (101)
T ss_dssp CCCEEEEEEE--CSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEE---EEHH-----------H-----HHHHS
T ss_pred cCCccCEEEe--eCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeee---eeee-----------c-----cccee
Confidence 3465444433 3578999998542 22 245788766543221110 0000 0 01113
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
.++|+||+|+|.|++||..-. +.+|+.-.|+|.|
T Consensus 63 ~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 63 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 567999999999999999632 4688889999987
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=95.78 E-value=0.025 Score=44.47 Aligned_cols=80 Identities=19% Similarity=0.197 Sum_probs=45.9
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCCCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
+..|..+.+.-- .++++.++|.-.........|-...+. ... . + . .. -..+++
T Consensus 4 P~~P~~l~~~~~-~~~sv~lsW~~p~~~~~i~~Y~i~~~~-~~~--~---~-~-----------------~~--t~~~~~ 56 (88)
T d1k85a_ 4 PTAPTNLASTAQ-TTSSITLSWTASTDNVGVTGYDVYNGT-ALA--T---T-V-----------------TG--TTATIS 56 (88)
T ss_dssp CCCCEEEEEEEE-CSSCEEEEEECCSCCSSEEEEEEEESS-SEE--E---E-E-----------------SS--SEEEEC
T ss_pred cCCCCCcEEEEe-cCCEEEEEEeCCCCCCCEEEEEEEccc-eEE--E---e-c-----------------CC--CEEEEC
Confidence 345777776543 368999999744332334444332211 000 0 0 0 01 135689
Q ss_pred CCCCCcEEEEEEecCC-----CCcceeEEEEc
Q 006938 178 GLKKGVRYYYKVGSDS-----KGWSETHSFVS 204 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~~-----~~~S~~~~F~T 204 (625)
||+|++.|.|||..-. +.+|+..+++|
T Consensus 57 ~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 57 GLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp CCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred CCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence 9999999999999631 24566666665
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.78 E-value=0.0071 Score=48.94 Aligned_cols=34 Identities=15% Similarity=0.354 Sum_probs=28.0
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
..++++|+|++.|.+||.... +.||+.-.++|+|
T Consensus 59 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 59 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP 96 (97)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence 457899999999999999643 4678888898876
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.73 E-value=0.029 Score=44.88 Aligned_cols=73 Identities=12% Similarity=0.043 Sum_probs=40.0
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC--------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCce
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG--------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGW 170 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~--------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~ 170 (625)
..|..+.+.... ++++.|.|..... ..-.|+|....+...... .... ..+.
T Consensus 3 ~~P~~l~v~~~~-~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~------~~~~--------------~~~~ 61 (101)
T d1iarb2 3 RAPGNLTVHTNV-SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRI------YNVT--------------YLEP 61 (101)
T ss_dssp CCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEE------EEEC--------------SSCC
T ss_pred ccCCcCEEEEEe-CCeEEEEEccccCCCCccceeeEEEEeeecccceeeeee------eeec--------------cCcc
Confidence 467777775443 5799999986531 125788877665433211 1100 1123
Q ss_pred EEEEEEcCCCCCcEEEEEEecC
Q 006938 171 IFDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
...+++.+|+|+|.|.+||...
T Consensus 62 ~~~~~i~~L~p~t~Y~~rVrA~ 83 (101)
T d1iarb2 62 SLRIAASTLKSGISYRARVRAW 83 (101)
T ss_dssp EEEECC-----CCCEEEEEEEE
T ss_pred ceEEEECCCCCCCEEEEEEEEE
Confidence 4577899999999999999863
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.70 E-value=0.034 Score=44.24 Aligned_cols=81 Identities=16% Similarity=0.054 Sum_probs=50.3
Q ss_pred CceeEEEEecCCCCceEEEEEecCC--Cc-eEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG--EK-RYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~--~~-~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
.|..+++.-..+.+.+.|.|..... .. -.|+|....+..... ...+. ++....++|
T Consensus 4 PP~~l~v~~~~~ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~---~~~~~------------------~~~~~~~~i 62 (94)
T d1fnfa1 4 PPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS---LEEVV------------------HADQSSCTF 62 (94)
T ss_dssp CCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCC---EEEEE------------------CTTCCEEEC
T ss_pred cCcCcEEEEecCCCEEEEEeeCCCCCCeeEEEEEEEEecccCceE---EEEEe------------------CCCccEEEE
Confidence 5888888766556779999985433 23 458888665432211 11111 112357889
Q ss_pred cCCCCCcEEEEEEecC-CCCcceeEE
Q 006938 177 KGLKKGVRYYYKVGSD-SKGWSETHS 201 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~-~~~~S~~~~ 201 (625)
+||+|||.|..+|..- +.+.|...+
T Consensus 63 ~~L~p~t~Y~v~V~a~~~~g~s~p~s 88 (94)
T d1fnfa1 63 DNLSPGLEYNVSVYTVKDDKESVPIS 88 (94)
T ss_dssp CCCCTTSCEEEEEEEEETTEECCCEE
T ss_pred CCCCCCCEEEEEEEEEcCCCEeCCEE
Confidence 9999999999999863 234444333
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.39 E-value=0.035 Score=44.65 Aligned_cols=86 Identities=10% Similarity=0.019 Sum_probs=51.9
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
..|..+++.-- .++++.|.|..... ..-.|+|...++.. . ..... +-....+|
T Consensus 2 ~~P~~l~~~~~-t~~si~l~W~~p~~~i~~Y~v~~~~~~~~~-~-----~~~~~------------------~~~~~~~l 56 (102)
T d2cuha1 2 DGPTQLRALNL-TEGFAVLHWKPPQNPVDTYDIQVTAPGAPP-L-----QAETP------------------GSAVDYPL 56 (102)
T ss_dssp SSCEEEECCCC-SSSCEEEEEECCSSCCSEEEEEEECSSSCC-E-----EEEEE------------------TTCSEEEE
T ss_pred cCCCccEEEEe-CCCEEEEEEEeeeccceeeEEEEEeccccc-e-----eeeee------------------eeeeeEEE
Confidence 35777766432 36899999986542 23568886654321 1 11111 11235779
Q ss_pred cCCCCCcEEEEEEecCC-CCcc--eeEEEEcCCCCC
Q 006938 177 KGLKKGVRYYYKVGSDS-KGWS--ETHSFVSRNEDS 209 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~~-~~~S--~~~~F~T~p~~~ 209 (625)
+||+|||.|.++|..-. .+.| ..-.|+|.+...
T Consensus 57 ~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~T~~~~P 92 (102)
T d2cuha1 57 HDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEAP 92 (102)
T ss_dssp CSCCSSSEEEEEEEEEETTEECCCEEEEEESCCCCT
T ss_pred ccEEeeEEEEEEEEEEeCCCCcCCEEEEEECCCCCC
Confidence 99999999999998632 2333 345788876443
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.35 E-value=0.042 Score=44.31 Aligned_cols=70 Identities=10% Similarity=0.083 Sum_probs=46.2
Q ss_pred CCceeEEEEecC-CCCceEEEEEecC----C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCce
Q 006938 99 TGPRAGALGFTE-DASEMRVMFLAED----G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGW 170 (625)
Q Consensus 99 ~~P~qv~L~~~~-~~~~~~V~W~T~~----~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~ 170 (625)
..|..+.+.... .++++.|.|.... . ..-.|+|........... .. .+.
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~-----~~------------------~~~ 59 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTW-----MV------------------KDL 59 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEE-----EC------------------GGG
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeee-----cc------------------ccc
Confidence 468888887654 4689999998542 1 135678877654322111 10 112
Q ss_pred EEEEEEcCCCCCcEEEEEEec
Q 006938 171 IFDAVIKGLKKGVRYYYKVGS 191 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~ 191 (625)
....+|++|+|++.|.+||..
T Consensus 60 ~~~~~i~~L~p~t~Y~~rVra 80 (104)
T d1n26a3 60 QHHCVIHDAWSGLRHVVQLRA 80 (104)
T ss_dssp CSEEEESSCCTTCCEEEEEEE
T ss_pred eEEEEECCCCCCCEEEEEEEE
Confidence 245679999999999999986
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.35 E-value=0.019 Score=46.36 Aligned_cols=84 Identities=13% Similarity=0.184 Sum_probs=51.3
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCCC---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDGE---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
+..|..+++.-. +++++.|.|...... .-.|+|........... .. ... ...
T Consensus 11 P~~P~~~~~~~~-~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~-----~~-----------------~~~--~~~ 65 (102)
T d1x5za1 11 PGQPLNFKAEPE-SETSILLSWTPPRSDTIANYELVYKDGEHGEEQRI-----TI-----------------EPG--TSY 65 (102)
T ss_dssp CCCCEEEEEECS-SSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCC-----EE-----------------CSS--SEE
T ss_pred CcCCCCeEEEEc-cCCEEEEEEECCCCCCccceEEEEEeCCCCceEEE-----Ec-----------------CCc--CEE
Confidence 345777777643 468999999864322 24566665443211100 00 011 245
Q ss_pred EEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 175 VIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
+|+||+|+|.|.+||..-. +.+|+...++|..
T Consensus 66 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 66 RLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp EEECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred EECCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence 6999999999999998532 2467778888864
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.32 E-value=0.02 Score=45.69 Aligned_cols=82 Identities=13% Similarity=0.152 Sum_probs=50.0
Q ss_pred CceeEEEEecCCCCceEEEEEecC----C-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCce
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED----G-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGW 170 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~----~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~ 170 (625)
.|..+.+.-. .++++.|.|.... . ..-.|+|...+....... .. ...
T Consensus 4 pP~~v~~~~~-s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~-----~~------------------~~~ 59 (100)
T d1x5ja1 4 PPVGVQASIL-SHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYK-----NA------------------NAT 59 (100)
T ss_dssp CCEEEEEEEE-ETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCE-----EC------------------CBC
T ss_pred CCcCeEEEEe-cCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeE-----ec------------------CCC
Confidence 4777776544 3689999997531 1 123466665543321111 00 011
Q ss_pred EEEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcC
Q 006938 171 IFDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSR 205 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~ 205 (625)
...++|+||+|+|.|.+||.... +.||....++|.
T Consensus 60 ~~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 60 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 13567999999999999999632 467777777774
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.22 E-value=0.029 Score=46.03 Aligned_cols=88 Identities=15% Similarity=0.160 Sum_probs=53.9
Q ss_pred CCceeEEEEecC-CCCceEEEEEecC--C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 99 TGPRAGALGFTE-DASEMRVMFLAED--G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 99 ~~P~qv~L~~~~-~~~~~~V~W~T~~--~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
..|..+++...+ .++++.|.|.-.. + ..-.|+|....+..... ..... ..+-..
T Consensus 6 ~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~-------~~~~~-------------~~~~~~ 65 (115)
T d1bqua2 6 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQ-------IPPED-------------TASTRS 65 (115)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEE-------CCGGG-------------GCSCCS
T ss_pred CCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeec-------ccccc-------------cccccc
Confidence 458888877654 4688999997432 1 23567787665432110 00000 012235
Q ss_pred EEEEcCCCCCcEEEEEEecC----CC---CcceeEEEEcCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSD----SK---GWSETHSFVSRN 206 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~----~~---~~S~~~~F~T~p 206 (625)
.++|++|.|++.|.+||... .+ .||+..+++|..
T Consensus 66 ~~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 66 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 67799999999999999742 12 356778888854
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.20 E-value=0.075 Score=41.82 Aligned_cols=82 Identities=20% Similarity=0.281 Sum_probs=49.7
Q ss_pred CceeEEEEecCCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
.|..+.+. ....+++.|.|..... ..-.|+|....+...... .. ++.....
T Consensus 3 ~P~~~~~~-~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~-----~~------------------~~~~~~~ 58 (93)
T d2vkwa2 3 APKLEGQM-GEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEI-----RL------------------PSGSDHV 58 (93)
T ss_dssp CCEEEEEE-CTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCE-----EE------------------CTTCCEE
T ss_pred CCccCEeE-EcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeee-----ec------------------cCCceEE
Confidence 46665543 3346899999986542 234688877665322111 11 1112357
Q ss_pred EEcCCCCCcEEEEEEecCC-CCcce--eEEEEcC
Q 006938 175 VIKGLKKGVRYYYKVGSDS-KGWSE--THSFVSR 205 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~~-~~~S~--~~~F~T~ 205 (625)
+++||+|++.|.+||..-. .+.|+ ...|+|.
T Consensus 59 ~i~~L~p~t~Y~~~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 59 MLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EEeccccceEEEEEEEEEcCCCCcCCEeEEEEec
Confidence 7999999999999999642 23332 4667774
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.17 E-value=0.074 Score=42.99 Aligned_cols=82 Identities=12% Similarity=0.093 Sum_probs=50.5
Q ss_pred CCceeEEEEecC-CCCceEEEEEecCC--------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCc
Q 006938 99 TGPRAGALGFTE-DASEMRVMFLAEDG--------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPG 169 (625)
Q Consensus 99 ~~P~qv~L~~~~-~~~~~~V~W~T~~~--------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~ 169 (625)
..|..+.+..-. .++++.|.|..... ..-.++|....+...... +. .
T Consensus 9 ~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~------~~------------------~ 64 (109)
T d1uc6a_ 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHV------EL------------------S 64 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCE------EE------------------S
T ss_pred CCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEe------cc------------------C
Confidence 458888887543 46899999986431 134566665543321111 00 0
Q ss_pred eEEEEEEcCCCCCcEEEEEEecCC------CCcceeEEEEc
Q 006938 170 WIFDAVIKGLKKGVRYYYKVGSDS------KGWSETHSFVS 204 (625)
Q Consensus 170 ~~h~a~ltgL~PgT~Y~YrV~~~~------~~~S~~~~F~T 204 (625)
.....+|.+|+|+|.|.+||.... +.||+...++|
T Consensus 65 ~~~~~~i~~L~~~t~Y~~rVrA~~~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 65 NGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp SCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred CceeEEeCCCCCCCEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence 113566899999999999998631 24566666644
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.17 E-value=0.066 Score=43.08 Aligned_cols=88 Identities=15% Similarity=0.031 Sum_probs=54.6
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC-------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG-------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~-------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
..|..+.+... +.+++.|.|..... ..-.|+|........... . ..-.......
T Consensus 10 ~pP~~v~v~~~-~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~-----~-------------~~~~~~~~~~ 70 (109)
T d1va9a1 10 GPPMDVTLQPV-TSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY-----S-------------IVEMKATGDS 70 (109)
T ss_dssp SCCEEEEEEEC-SSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC-----B-------------CCBCCCCSSE
T ss_pred CCCcCcEEEEe-cCCEEEEEEcCCCCCCCCCcEEEEEEEEeecccccccee-----e-------------eeEEecCCCe
Confidence 45888887655 47899999985421 123577766543211100 0 0000123345
Q ss_pred EEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSR 205 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~ 205 (625)
..++|++|+|+|.|.+||..-. +.||+.-.|+|.
T Consensus 71 ~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 71 EVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp EEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred eEEEECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 6788999999999999999632 357777777764
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.16 E-value=0.014 Score=47.78 Aligned_cols=85 Identities=12% Similarity=0.014 Sum_probs=51.9
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC----C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG----E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~----~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
...|..+.+.. .+++++|.|.-... . .-.|+|......... .. ... ....+
T Consensus 8 ~sPP~~~~~~~--t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~~~-~~---~~~------------------~~~~~ 63 (108)
T d1v5ja_ 8 LSPPRGLVAVR--TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEV-LD---PAV------------------AGTET 63 (108)
T ss_dssp CCCCEEEEEEE--CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCEE-EE---EEE------------------CSSCC
T ss_pred CCcCCCeEEEE--cCCEEEEEEEecccCCCceeEEEEEeeeeeeeeee-cc---ccc------------------cceee
Confidence 34577776654 35789999985431 1 246788776543211 11 011 11225
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRN 206 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p 206 (625)
.++++||+|++.|.|||..-. +.+|+...++|..
T Consensus 64 ~~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T~~ 101 (108)
T d1v5ja_ 64 ELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp EEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSS
T ss_pred eEEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEECCC
Confidence 677999999999999999632 2356666676654
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.14 E-value=0.037 Score=44.98 Aligned_cols=72 Identities=10% Similarity=0.084 Sum_probs=44.5
Q ss_pred CCCceEEEEEecCC-----CceEEEEEccCCC-CCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcE
Q 006938 111 DASEMRVMFLAEDG-----EKRYVKYGEKKDQ-MGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVR 184 (625)
Q Consensus 111 ~~~~~~V~W~T~~~-----~~~~V~yg~~~~~-~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~ 184 (625)
.++++.|.|..... ..-.|+|....+. ....+ . .. ..-.+..+|++|.|+|.
T Consensus 20 ~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v-~---~~------------------~~~~~~~~l~~L~p~t~ 77 (106)
T d1cd9b2 20 QPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLV-F---HL------------------PSSKDQFELCGLHQAPV 77 (106)
T ss_dssp CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEE-E---EE------------------ESCEEEEEECCCCSCSC
T ss_pred CCCEEEEEEcCcccCCccceEEEEEEeeccccccceee-e---cc------------------cCCceEEEEeccCCCeE
Confidence 46789999975431 2357899865433 22221 1 00 11235667999999999
Q ss_pred EEEEEecC----CC---CcceeEEEEc
Q 006938 185 YYYKVGSD----SK---GWSETHSFVS 204 (625)
Q Consensus 185 Y~YrV~~~----~~---~~S~~~~F~T 204 (625)
|.+||..- .+ .||...+|+|
T Consensus 78 Y~frVra~~~~g~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 78 YTLQMRCIRSSLPGFWSPWSPGLQLRP 104 (106)
T ss_dssp EEEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred EEEEEEEEeCCCCCCCcCCCCCeEecC
Confidence 99999852 22 4566677765
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.14 E-value=0.011 Score=48.63 Aligned_cols=71 Identities=10% Similarity=0.140 Sum_probs=41.1
Q ss_pred CceeEEEEecC-CCCceEEEEEecCC-C----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 100 GPRAGALGFTE-DASEMRVMFLAEDG-E----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 100 ~P~qv~L~~~~-~~~~~~V~W~T~~~-~----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
.|..+.+.... ..+++.|.|..... . .-.|+|....+..... .. . ..+....
T Consensus 13 ~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~~~--------~~----------~----~~~~~~~ 70 (108)
T d1wf5a1 13 APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVL--------LA----------S----VDPKATS 70 (108)
T ss_dssp CCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCEEE--------ES----------S----CCTTCCE
T ss_pred CCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCceEE--------ee----------e----ecCCccE
Confidence 45554444443 35789999975432 1 2456776654322110 00 0 0112235
Q ss_pred EEEcCCCCCcEEEEEEecC
Q 006938 174 AVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~ 192 (625)
++++||+|++.|.|||..-
T Consensus 71 ~~i~~L~p~t~Y~frV~A~ 89 (108)
T d1wf5a1 71 VTVKGLVPARSYQFRLCAV 89 (108)
T ss_dssp EEEESCCTTCEEEEEEEEE
T ss_pred EEECCCCCCCEEEEEEEEE
Confidence 6789999999999999863
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.13 E-value=0.069 Score=41.62 Aligned_cols=69 Identities=19% Similarity=0.166 Sum_probs=43.9
Q ss_pred CceeEEEEecCCCCceEEEEEecCCC---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDGE---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
.|..+++.-. .++++.|.|...... .-.|+|....+...... ... ++....++|
T Consensus 3 pP~~l~~~~~-~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~----~~~------------------~~~~~~~~i 59 (91)
T d1fnfa2 3 PPTDLRFTNI-GPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAE----LSI------------------SPSDNAVVL 59 (91)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEE----EEE------------------CTTCCEEEE
T ss_pred cCCceEEEEe-CCCEEEEEEEecCCCCcceeEEEEEECCCCccEEE----EEe------------------CCCceEEEE
Confidence 4776766533 478999999865432 24688876654322110 111 112246789
Q ss_pred cCCCCCcEEEEEEec
Q 006938 177 KGLKKGVRYYYKVGS 191 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~ 191 (625)
+||+|+|.|.++|..
T Consensus 60 ~~L~p~t~Y~~~V~a 74 (91)
T d1fnfa2 60 TNLLPGTEYVVSVSS 74 (91)
T ss_dssp CSCCTTCEEEEEEEE
T ss_pred eceeCCCEEEEEEEE
Confidence 999999999999986
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.06 E-value=0.058 Score=42.03 Aligned_cols=70 Identities=11% Similarity=0.058 Sum_probs=45.3
Q ss_pred CceeEEEEecCCCCceEEEEEecC-CCc-eEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED-GEK-RYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~-~~~-~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+++.-- .++++.|.|.... +.. -.|+|........... .... +-...++|+
T Consensus 3 ~P~~l~v~~v-t~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~----~~v~------------------~~~~~~~i~ 59 (89)
T d1fnfa3 3 SPTGIDFSDI-TANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE----DRVP------------------HSRNSITLT 59 (89)
T ss_dssp CCEEEEEESC-CSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEE----EEEE------------------TTCCEEEEE
T ss_pred cCcCCEEEEe-cCCEEEEEEEeCCCEEeeEEEEEEECCCCCceEE----EEEC------------------CCccEEEEC
Confidence 4777776643 3799999998654 223 4588887654322111 1111 112457899
Q ss_pred CCCCCcEEEEEEecC
Q 006938 178 GLKKGVRYYYKVGSD 192 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~ 192 (625)
||+|++.|.++|..-
T Consensus 60 ~L~p~t~Y~~~V~a~ 74 (89)
T d1fnfa3 60 NLTPGTEYVVSIVAL 74 (89)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred CCcccCEEEEEEEEE
Confidence 999999999999863
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.01 E-value=0.092 Score=40.89 Aligned_cols=70 Identities=13% Similarity=-0.002 Sum_probs=45.1
Q ss_pred CceeEEEEecCCCCceEEEEEecC-CC-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED-GE-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~-~~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+++.-- .++++.|.|.-.. +. .-.|+|....+..... ..... +....++|.
T Consensus 4 ~P~~l~v~~~-s~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~----~~~~~------------------~~~~~~~i~ 60 (90)
T d1tena_ 4 APSQIEVKDV-TDTTALITWFKPLAEIDGIELTYGIKDVPGDRT----TIDLT------------------EDENQYSIG 60 (90)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCSSCCSEEEEEEEETTCTTCCE----EEEEE------------------TTCCEEEEC
T ss_pred CCCCcEEEEe-cCCEEEEEEEeCceEeccEEEEEEEcCCCceeE----EEEec------------------CCcceeeEe
Confidence 5888887643 4689999997543 32 3568887655432111 11111 122467899
Q ss_pred CCCCCcEEEEEEecC
Q 006938 178 GLKKGVRYYYKVGSD 192 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~ 192 (625)
||+|||.|.++|..-
T Consensus 61 ~L~p~t~Y~~~V~a~ 75 (90)
T d1tena_ 61 NLKPDTEYEVSLISR 75 (90)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred eecCCCEEEEEEEEE
Confidence 999999999999863
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.00 E-value=0.031 Score=45.08 Aligned_cols=81 Identities=14% Similarity=0.035 Sum_probs=49.0
Q ss_pred CCceeEEEEecCCCCceEEEEEecC--CC---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED--GE---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~--~~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+.+.-. .++++.|+|.... ++ .-.|+|...+......... . ...
T Consensus 12 ~~P~~l~v~~~-s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------------------~--~~~ 65 (103)
T d1x5ga1 12 GPAPNLRAYAA-SPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV-----------------------S--SHS 65 (103)
T ss_dssp CCCSSCEEEEE-ETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEE-----------------------C--SSE
T ss_pred ccCCCcEEEEc-cCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEec-----------------------c--ccE
Confidence 34666665543 2578999997432 11 2447777655432211100 0 124
Q ss_pred EEEcCCCCCcEEEEEEecC----CCCcceeEEEEcC
Q 006938 174 AVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSR 205 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~ 205 (625)
++|+||+|+|.|.++|..- .+.+|+...++|.
T Consensus 66 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 66 YTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECC
T ss_pred EecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcC
Confidence 5689999999999999853 2346777777775
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.95 E-value=0.1 Score=40.92 Aligned_cols=71 Identities=15% Similarity=0.195 Sum_probs=45.6
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
..|..+.+.-.. +++++|.|.-... ..-.|+|....+.... ..+.. +.....+++
T Consensus 5 ~~P~~l~v~~v~-~~si~v~W~~p~~~~~~y~i~~~~~~~~~~~------~~~~~----------------~~~~~~~~i 61 (93)
T d1tdqa1 5 DGPTQILVRDVS-DTVAFVEWTPPRAKVDFILLKYGLVGGEGGK------TTFRL----------------QPPLSQYSV 61 (93)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSSCCSEEEEEEEESSSSCCC------EEEEE----------------CTTCSEEEE
T ss_pred CcCCCCEEEEeC-CCEEEEEEEccccCCCceEEEEEeccCccee------eEEEe----------------CCCceEEEE
Confidence 358888887664 5789999975432 2356778766543111 11110 112245689
Q ss_pred cCCCCCcEEEEEEecC
Q 006938 177 KGLKKGVRYYYKVGSD 192 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~ 192 (625)
+||+||++|.++|..-
T Consensus 62 ~~L~p~t~Y~v~V~a~ 77 (93)
T d1tdqa1 62 QALRPGSRYEVSISAV 77 (93)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred eCcccceEEEEEEEEE
Confidence 9999999999999963
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.94 E-value=0.025 Score=46.89 Aligned_cols=88 Identities=15% Similarity=0.257 Sum_probs=53.3
Q ss_pred CCceeEEEEecCCCCceEEEEEecC----CCc---eEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED----GEK---RYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~----~~~---~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
..|..+.+.... ++++.|.|.... ++. -.|+|....+. . .... . . ..+..
T Consensus 13 ~~P~~v~~~~~~-~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~------~--~~~~--~--------~----~~~~~ 69 (119)
T d1x5ha1 13 AAPQNLSLEVRN-SKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------S--DVTE--T--------L----VSGTQ 69 (119)
T ss_dssp CCCEEEEEECCS-SSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------E--EEEC--C--------B----CCTTC
T ss_pred CCCcCeEEEEec-CcEEEEEEEcccccCCCCCEEEEEEEEeecccc------c--ceee--e--------e----cCCCc
Confidence 357888876553 589999997542 111 23555443321 0 0000 0 0 11223
Q ss_pred EEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNEDS 209 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~~ 209 (625)
..++|+||+|+|.|.+||..-. +.||+...|+|.+...
T Consensus 70 ~~~~i~~L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~~~ 111 (119)
T d1x5ha1 70 LSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDL 111 (119)
T ss_dssp CEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSSCC
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCCCC
Confidence 5677999999999999998531 3478888999976443
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=94.92 E-value=0.087 Score=40.80 Aligned_cols=68 Identities=9% Similarity=0.115 Sum_probs=44.4
Q ss_pred CceeEEEEecCCCCceEEEEEecCC-C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG-E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~-~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+++.-- ..+++.|.|..... . .-.|+|....... ...... .....++|+
T Consensus 2 aP~~l~v~~~-t~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~------~~~~~~------------------~~~~~~~~~ 56 (87)
T d1qr4a1 2 NPKDLEVSDP-TETTLSLRWRRPVAKFDRYRLTYVSPSGKK------NEMEIP------------------VDSTSFILR 56 (87)
T ss_dssp CCEEEEEESC-CSSEEEEEEECCSSCCSEEEEEEECTTCCE------EEEEEC------------------TTCSEEEEE
T ss_pred cCcCcEEEEe-cCCEEEEEEECCCCCcceeEEEeecCCcce------eEEeCC------------------CCcCEEEEC
Confidence 5888887644 36899999986543 2 3468887655321 111111 112467899
Q ss_pred CCCCCcEEEEEEecC
Q 006938 178 GLKKGVRYYYKVGSD 192 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~ 192 (625)
||+|++.|.++|..-
T Consensus 57 ~L~p~t~Y~v~V~a~ 71 (87)
T d1qr4a1 57 GLDAGTEYTISLVAE 71 (87)
T ss_dssp SCCSSCEEEEEEEEE
T ss_pred CCCcCCEEEEEEEEE
Confidence 999999999999863
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.83 E-value=0.14 Score=39.93 Aligned_cols=82 Identities=12% Similarity=0.070 Sum_probs=49.6
Q ss_pred CceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+.+.-. .++++.|.|..... ..-.|+|....... ...... +....++|+
T Consensus 4 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~------~~~~~~------------------~~~~~~~i~ 58 (93)
T d2cuma1 4 APRDLEAKEV-TPRTALLTWTEPPVRPAGYLLSFHTPGGQT------QEILLP------------------GGITSHQLL 58 (93)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCSSCCSEEEEEEECTTSCE------EEEEEC------------------SSCSEEEEC
T ss_pred cCCCCEEEEe-CCCEEEEEEEccccccccEEEEEEcccccc------EEEEEC------------------CCccEEEEe
Confidence 4777666533 36899999986542 33568887654321 111111 112356799
Q ss_pred CCCCCcEEEEEEecCC-CCcce--eEEEEcCC
Q 006938 178 GLKKGVRYYYKVGSDS-KGWSE--THSFVSRN 206 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~~-~~~S~--~~~F~T~p 206 (625)
||+|||.|.++|..-. .+.|+ ...|+|..
T Consensus 59 ~L~p~t~Y~~~V~a~~~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 59 GLFPSTSYNARLQAMWGQSLLPPVSTSFTTGG 90 (93)
T ss_dssp SCCTTCEEEEEEEEEBTTBCCCCEEEEEECCC
T ss_pred CccCCCEEEEEEEEEeCCCCCCCEEEEEEeCC
Confidence 9999999999998632 23333 34566643
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.60 E-value=0.024 Score=46.35 Aligned_cols=82 Identities=18% Similarity=0.151 Sum_probs=49.5
Q ss_pred CceeEEEEecCC-----CCceEEEEEecCC---------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccc
Q 006938 100 GPRAGALGFTED-----ASEMRVMFLAEDG---------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGW 165 (625)
Q Consensus 100 ~P~qv~L~~~~~-----~~~~~V~W~T~~~---------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~ 165 (625)
.|..+.++.... .+++.|.|.-... ..-.|+|....+...... .
T Consensus 3 PP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~-------~--------------- 60 (106)
T d1axib2 3 PPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMM-------D--------------- 60 (106)
T ss_dssp CCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEEC-------C---------------
T ss_pred CCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceee-------e---------------
Confidence 466666654432 3579999985321 135678877654322111 0
Q ss_pred cCCceEEEEEEcCCCCCcEEEEEEecC---C---CCcceeEEEEcC
Q 006938 166 RDPGWIFDAVIKGLKKGVRYYYKVGSD---S---KGWSETHSFVSR 205 (625)
Q Consensus 166 ~~~~~~h~a~ltgL~PgT~Y~YrV~~~---~---~~~S~~~~F~T~ 205 (625)
...-..++|++|+|+|.|.+||.+. + +.||+....+|+
T Consensus 61 --~~~~~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 61 --PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp --CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred --ecccceEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 0111367799999999999999862 2 356666666553
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.54 E-value=0.1 Score=40.45 Aligned_cols=70 Identities=11% Similarity=0.031 Sum_probs=43.5
Q ss_pred CceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+.++-- +++++.|.|..... ....++|........... .... .-....+|+
T Consensus 2 pP~~l~~~~v-~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~----~~~~------------------~~~~~~~i~ 58 (90)
T d1fnha1 2 APTDLKFTQV-TPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKE----INLA------------------PDSSSVVVS 58 (90)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSSCCSEEEEEEEESSSCSCCCE----EEEC------------------TTCCEEEEC
T ss_pred CCCCEEEEEe-cCCEEEEEEEccceeccceEEEEEeeeCCCceEE----EEeC------------------CCCeEEEEe
Confidence 3667776554 36899999986543 245677766543211110 0110 011357899
Q ss_pred CCCCCcEEEEEEecC
Q 006938 178 GLKKGVRYYYKVGSD 192 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~ 192 (625)
||+|||.|++||..-
T Consensus 59 ~L~p~t~Y~~~V~a~ 73 (90)
T d1fnha1 59 GLMVATKYEVSVYAL 73 (90)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred cccCceEEEEEEEEE
Confidence 999999999999974
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.45 E-value=0.06 Score=44.95 Aligned_cols=78 Identities=22% Similarity=0.200 Sum_probs=47.8
Q ss_pred CCceEEEEEecCCC----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcEEEE
Q 006938 112 ASEMRVMFLAEDGE----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYY 187 (625)
Q Consensus 112 ~~~~~V~W~T~~~~----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~Y~Y 187 (625)
++++.|.|.-..+. .-.|.|......... ..-..... ........+|+||+|+|.|.+
T Consensus 29 ~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~---~~~~~~~v---------------~~~~~~s~~i~~L~p~t~Y~f 90 (120)
T d1ujta_ 29 PTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQAT---SSWQNLDA---------------KVPTERSAVLVNLKKGVTYEI 90 (120)
T ss_dssp TTEEEEEEEESSCCSSCCEEEEEEEESSSSSTT---TCCEEEEC---------------CCTTCCEEEEESCCSSEEEEE
T ss_pred CCeEEEEecCCCCCCcEEEEEEEeeecccCCCC---cceEEEEe---------------ccCceeEEEECCCCCCCEEEE
Confidence 68999999865422 256888665432110 00000000 011234667999999999999
Q ss_pred EEecC----CCCcceeEEEEcCCC
Q 006938 188 KVGSD----SKGWSETHSFVSRNE 207 (625)
Q Consensus 188 rV~~~----~~~~S~~~~F~T~p~ 207 (625)
||..- .+..|+.-.++|.+.
T Consensus 91 ~V~A~n~~G~G~~S~~~~~~T~e~ 114 (120)
T d1ujta_ 91 KVRPYFNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp EEEEESSSCCCCCCCCEEEEECSS
T ss_pred EEEEEeCCcCcCCCCCEEEEeCCC
Confidence 99863 235678888999874
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=94.42 E-value=0.066 Score=41.75 Aligned_cols=69 Identities=16% Similarity=0.131 Sum_probs=44.9
Q ss_pred CceeEEEEecCCCCceEEEEEecC-C-CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED-G-EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~-~-~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+.+.-.. ++++.|.|.... + ..-.|+|.......... .++. .-...++|+
T Consensus 3 ~P~~l~v~~v~-~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~-----~~~~------------------~~~~~~~i~ 58 (88)
T d1qr4a2 3 SPKGISFSDIT-ENSATVSWTPPRSRVDSYRVSYVPITGGTPNV-----VTVD------------------GSKTRTKLV 58 (88)
T ss_dssp CCSCEEEESCC-SSCEEEEECCCSSCCSEEEEEEEETTCCCCEE-----EEEE------------------TTCCEEEEC
T ss_pred CCcceEEEEec-CCEEEEEEEcccEeeceEEEEEEeccCCceEE-----EEec------------------CCccEEEEC
Confidence 47777665554 689999997553 2 34568887765432211 1111 112367899
Q ss_pred CCCCCcEEEEEEecC
Q 006938 178 GLKKGVRYYYKVGSD 192 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~ 192 (625)
||+|||+|.++|..-
T Consensus 59 ~L~p~t~Y~~~V~a~ 73 (88)
T d1qr4a2 59 KLVPGVDYNVNIISV 73 (88)
T ss_dssp SCCSSCEEEEEEEEE
T ss_pred CCCCCCEEEEEEEEE
Confidence 999999999999863
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.34 E-value=0.017 Score=48.19 Aligned_cols=36 Identities=17% Similarity=0.138 Sum_probs=29.7
Q ss_pred EEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
..++|++|+|+|.|.+||..-. +.||....|+|.+.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 4688999999999999999632 35788899999764
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=94.30 E-value=0.16 Score=40.97 Aligned_cols=72 Identities=13% Similarity=0.110 Sum_probs=36.9
Q ss_pred CCCceEEEEEecC-CCc----eEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcEE
Q 006938 111 DASEMRVMFLAED-GEK----RYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRY 185 (625)
Q Consensus 111 ~~~~~~V~W~T~~-~~~----~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~Y 185 (625)
..++++|.|.... +.. -.|+|................ .....+.. ...+-....+|+||+|+|+|
T Consensus 12 ~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~--~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y 81 (107)
T d2ic2a1 12 SDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNI--PYGKPKWN--------SELGKSFTASVTDLKPQHTY 81 (107)
T ss_dssp C---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEE--ECCSCSCS--------SSSEEEEEEEECSCCSSEEE
T ss_pred ECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeee--eccceeee--------ecccceeEEEECCCcCCcEE
Confidence 4689999998653 222 347776544322211111111 10000000 12344567889999999999
Q ss_pred EEEEecC
Q 006938 186 YYKVGSD 192 (625)
Q Consensus 186 ~YrV~~~ 192 (625)
.+||..-
T Consensus 82 ~frV~A~ 88 (107)
T d2ic2a1 82 RFRILAV 88 (107)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=94.23 E-value=0.071 Score=42.04 Aligned_cols=71 Identities=13% Similarity=0.054 Sum_probs=42.4
Q ss_pred CceeEEEEecCCCCceEEEEEecC--C---Cc-eEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED--G---EK-RYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~--~---~~-~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
.|..+.+.-. +++++.|.|.... . .. -.|+|....+...... .... .+....
T Consensus 9 ~P~~~~v~~~-s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~----~~~~-----------------~~~~~~ 66 (95)
T d2ibga1 9 VPELLEIEEY-SETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFK----ATIE-----------------GAHARS 66 (95)
T ss_dssp CCEECCCBCC-SSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEE----EEEE-----------------CTTCCE
T ss_pred CCcCeEEEEe-CCCEEEEEEEeeeeccCCcccccceeEeeeeecceeee----eecc-----------------CCceeE
Confidence 3655554333 3589999997432 1 12 3688887654322111 0111 112346
Q ss_pred EEEcCCCCCcEEEEEEecC
Q 006938 174 AVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~ 192 (625)
.+|+||+|+|.|.+||..-
T Consensus 67 ~~i~~L~p~t~Y~~~V~A~ 85 (95)
T d2ibga1 67 FKIAPLETATMYEFKLQSF 85 (95)
T ss_dssp EEECSCCTTCEEEEEEEEE
T ss_pred EEEeeccCCeEEEEEEEEE
Confidence 6799999999999999863
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.22 E-value=0.092 Score=40.66 Aligned_cols=68 Identities=9% Similarity=0.198 Sum_probs=44.6
Q ss_pred CceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+++.-. .++++.|.|..... ..-.|+|......... .... +...+++|+
T Consensus 3 ~P~nl~v~~~-~~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~~------~~~~------------------~~~~~~~~~ 57 (86)
T d1tdqa3 3 SPRDLMVTAS-SETSISLIWTKASGPIDHYRITFTPSSGISSE------VTVP------------------RDRTSYTLT 57 (86)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCCSCCSEEEEEEECSSSCCEE------EEEE------------------SSCSEEEEC
T ss_pred cCCCCEEEEe-cCCEEEEEEeCCCCCccceEEEEecccccceE------EEeC------------------CCccEEEEC
Confidence 4777777754 46899999986543 2356888765532111 1111 011357899
Q ss_pred CCCCCcEEEEEEecC
Q 006938 178 GLKKGVRYYYKVGSD 192 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~ 192 (625)
||+|||.|.++|..-
T Consensus 58 ~L~p~t~Y~v~V~a~ 72 (86)
T d1tdqa3 58 DLEPGAEYIISITAE 72 (86)
T ss_dssp CCCTTCCEEEEEEEE
T ss_pred CCccccEEEEEEEEE
Confidence 999999999999863
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.93 E-value=0.081 Score=43.27 Aligned_cols=83 Identities=13% Similarity=0.047 Sum_probs=50.7
Q ss_pred CCceeEEEEecCCCCceEEEEEecC--CC---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED--GE---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~--~~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+++..+ .+++.|.|.-.. +. .-.|+|+...... . .... .+....
T Consensus 22 ~~P~~~~~~~~--~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~-~-----~~~~------------------~~~~~~ 75 (113)
T d1x5ia1 22 EVPSSLHVRPL--VTSIVVSWTPPENQNIVVRGYAIGYGIGSPHA-Q-----TIKV------------------DYKQRY 75 (113)
T ss_dssp CSCSEEEEEEE--TTEEEEEEECCSCTTBCCCEEEEEECSSCGGG-E-----EEEC------------------CTTCCE
T ss_pred CCCEeeeeeeC--CCEEEEEEEccccCCccEEEEEEEeeeccccc-e-----eeee------------------eCCccE
Confidence 45777887665 468999998433 11 2457776654321 1 1111 112246
Q ss_pred EEEcCCCCCcEEEEEEecCC-CCcce--eEEEEcCCC
Q 006938 174 AVIKGLKKGVRYYYKVGSDS-KGWSE--THSFVSRNE 207 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~~-~~~S~--~~~F~T~p~ 207 (625)
.+|.+|+|++.|.+||..-. .+.|+ .-+++|.|.
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 76 YTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp EEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred EEEeccccCcEEEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 67999999999999999643 24443 345777664
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.87 E-value=0.11 Score=42.25 Aligned_cols=75 Identities=19% Similarity=0.327 Sum_probs=43.5
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecC-C----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAED-G----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~-~----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
-+..|..+.+.-. ..+++.|.|.-.. + ..-.|+|............. ... ....
T Consensus 10 pP~~P~~~~v~~~-~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~--~~~------------------~~~~ 68 (108)
T d1x4za1 10 PPEAPDRPTISTA-SETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILAT--SAI------------------PPSR 68 (108)
T ss_dssp CCCCCCCCEEEEC-CSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEE--EEE------------------CTTC
T ss_pred CCccCCCCEEEEc-cCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEE--Eee------------------cCCc
Confidence 3445766666533 4688999995332 1 12457787654432211111 011 0112
Q ss_pred EEEEEcCCCCCcEEEEEEecC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
...+++||+|+|.|.+||..-
T Consensus 69 ~~~~v~~L~p~t~Y~frV~A~ 89 (108)
T d1x4za1 69 LSVEITGLEKGISYKFRVRAL 89 (108)
T ss_dssp CEEEEESCCTTCEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEE
Confidence 356789999999999999863
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.83 E-value=0.18 Score=39.16 Aligned_cols=69 Identities=13% Similarity=0.069 Sum_probs=43.8
Q ss_pred CceeEEEEecCCCCceEEEEEecC-C-CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED-G-EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~-~-~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+++.-. +.++++|.|.... + ..-.|+|....+..... ... ..-.....|+
T Consensus 4 pP~~l~v~~~-~~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~-----~~~------------------~~~~~~~~i~ 59 (90)
T d1fnha2 4 PPRRARVTDA-TETTITISWRTKTETITGFQVDAVPANGQTPIQ-----RTI------------------KPDVRSYTIT 59 (90)
T ss_dssp CCEEEEEEEE-CSSEEEEEEECCSSCCCCEEEEEEESSSSCCEE-----EEC------------------CTTCSEEEEE
T ss_pred cCCCCEEEEe-cCCEEEEEEECCCCCCceeEEEEEEccCCceEE-----Eec------------------CCCccEEEeC
Confidence 4888887643 4689999998543 2 23567787654321110 110 1112456789
Q ss_pred CCCCCcEEEEEEecC
Q 006938 178 GLKKGVRYYYKVGSD 192 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~ 192 (625)
||+|||.|.++|..-
T Consensus 60 ~L~p~t~Y~~~V~a~ 74 (90)
T d1fnha2 60 GLQPGTDYKIYLYTL 74 (90)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred CCCCCcEEEEEEEEE
Confidence 999999999999863
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=93.82 E-value=0.12 Score=41.04 Aligned_cols=72 Identities=7% Similarity=0.079 Sum_probs=43.9
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
+..|..+.+..+ .+++.|.|.-... ..-.|+|.............. ... -..
T Consensus 6 P~~P~~~~v~~~--~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--~~~-------------------~~~ 62 (100)
T d1cfba1 6 PNAPKLTGITCQ--ADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYE--KVP-------------------NTD 62 (100)
T ss_dssp CCCCEEEEEEEC--SSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEE--EEE-------------------TTC
T ss_pred CCcCcCcEEEEc--CCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEee--ecC-------------------Cce
Confidence 456888887754 4689999975431 235688876654332211111 110 012
Q ss_pred EEEEcCCCCCcEEEEEEecC
Q 006938 173 DAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~ 192 (625)
..++++|+|+|.|.+||..-
T Consensus 63 ~~~~~~L~p~t~Y~frV~A~ 82 (100)
T d1cfba1 63 SSFVVQMSPWANYTFRVIAF 82 (100)
T ss_dssp SEEEEECCSSEEEEEEEEEE
T ss_pred EEEEecCCCCCEEEEEEEEE
Confidence 34577999999999999964
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.70 E-value=0.094 Score=42.17 Aligned_cols=84 Identities=13% Similarity=0.181 Sum_probs=50.1
Q ss_pred CCCceeEEEEecCCCCceEEEEEecCC-Cc----eEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAEDG-EK----RYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~~-~~----~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
+..|..+.+.-. .+++++|.|.-... .. -.|+|........... .+. +--.
T Consensus 11 P~~P~~~~~~~~-~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~-----~~~------------------~~~~ 66 (105)
T d1x3da1 11 PDIPNPPRIANR-TKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQ-----CYM------------------GSQK 66 (105)
T ss_dssp CCCCCCCEEEEE-ETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEE-----EEE------------------ESCS
T ss_pred CcCCCCCEEEEc-cCCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEE-----Eec------------------CCcc
Confidence 345777777654 36889999975432 21 2344443332211111 111 0113
Q ss_pred EEEEcCCCCCcEEEEEEecC----CCCcceeEEEEcC
Q 006938 173 DAVIKGLKKGVRYYYKVGSD----SKGWSETHSFVSR 205 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~----~~~~S~~~~F~T~ 205 (625)
..++.+|+|+++|.+||..- .+.||+...|.|.
T Consensus 67 ~~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 67 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred EEEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence 45688999999999999852 2468888888875
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.57 E-value=0.067 Score=41.58 Aligned_cols=70 Identities=17% Similarity=0.146 Sum_probs=43.9
Q ss_pred CceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+++.-- .++++.|.|.-... ..-.|+|...++... ... .. .++-...++|+
T Consensus 3 aP~nl~v~~~-~~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~--------~~~----------~~----~~~~~~~~~~~ 59 (89)
T d1fnha3 3 APSNLRFLAT-TPNSLLVSWQPPRARITGYIIKYEKPGSPPR--------EVV----------PR----PRPGVTEATIT 59 (89)
T ss_dssp CCEEEEEEEE-ETTEEEEEEECCSSCCSEEEEEEECTTSCCE--------ECT----------TC----CCTTCCEEEEE
T ss_pred cCcCCEEEEe-cCCEEEEEEeCCCcCCceEEEEEeeccCCcc--------EEE----------EE----cCCCccEEEEE
Confidence 4777777554 36899999985442 234678876543210 000 00 01123467899
Q ss_pred CCCCCcEEEEEEecC
Q 006938 178 GLKKGVRYYYKVGSD 192 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~ 192 (625)
||+|||.|.+||..-
T Consensus 60 ~L~p~t~Y~~~V~a~ 74 (89)
T d1fnha3 60 GLEPGTEYTIYVIAL 74 (89)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred eeeCCCEEEEEEEEE
Confidence 999999999999863
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.48 E-value=0.23 Score=41.08 Aligned_cols=89 Identities=13% Similarity=0.076 Sum_probs=50.7
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecCCC-----ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAEDGE-----KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~~~-----~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
-...|..+++... +.+++.|.|.-.... ...++|............. ... ...
T Consensus 16 ~P~~P~~~~v~~~-~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~ 73 (127)
T d1ueya_ 16 VPNPPFDLELTDQ-LDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQ---TEV------------------SGT 73 (127)
T ss_dssp SCCCCEEEEEECC-SSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEE---EEE------------------ESS
T ss_pred cCcCCCCcEEEEe-cCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEE---eec------------------CCc
Confidence 4456888877644 358899999754321 2456665544332221100 000 011
Q ss_pred EEEEEcCCCCCcEEEEEEecCC----CCccee-EEEEcCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS----KGWSET-HSFVSRNE 207 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~-~~F~T~p~ 207 (625)
+...+++|+|++.|.+||..-. +.+|+. ..|+|.+.
T Consensus 74 ~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 74 QTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CCEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred eEEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 3455789999999999999632 235543 44666653
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.48 E-value=0.055 Score=45.93 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=29.7
Q ss_pred EEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
..++|+||+|+|.|.+||..-. +.+|+...|+|.+..
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~~ 122 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCCC
Confidence 3578999999999999999632 467888899997543
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.44 E-value=0.092 Score=42.41 Aligned_cols=76 Identities=8% Similarity=0.017 Sum_probs=43.4
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC-----CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG-----EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~-----~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+.+.-. ..++++|.|.-... ..-.|+|............. ..... .......
T Consensus 12 ~~P~~~~~~~~-~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~-~~~~~----------------~~~~~~~ 73 (111)
T d1wisa1 12 GPPTNLGISNI-GPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLL-IHQLS----------------NEPDARS 73 (111)
T ss_dssp CCCEEEEEESC-CSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEE-EEEEE----------------SCTTCSE
T ss_pred cCCCCCEEEEc-CCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceee-eeeee----------------cccceeE
Confidence 45777776533 46899999974431 12456776544322211000 00110 0112235
Q ss_pred EEEcCCCCCcEEEEEEecC
Q 006938 174 AVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~ 192 (625)
..|+||+|++.|.+||..-
T Consensus 74 ~~v~~L~p~t~Y~frV~A~ 92 (111)
T d1wisa1 74 MEVPDLNPFTCYSFRMRQV 92 (111)
T ss_dssp EEECSCCTTSEECCCCEEE
T ss_pred EEeCCCCCCCEEEEEEEEE
Confidence 6689999999999999964
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.40 E-value=0.045 Score=44.27 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=25.0
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSR 205 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~ 205 (625)
...++||+||++|.+||..-. +.||+.-.++|+
T Consensus 69 ~~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v~v~Tp 105 (107)
T d2crma1 69 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTP 105 (107)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCC
T ss_pred EEEEeccCCCCEEEEEEEEECCCcCcCCCCcEEEECC
Confidence 457899999999999999632 356776666664
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.20 E-value=0.073 Score=42.33 Aligned_cols=77 Identities=16% Similarity=0.151 Sum_probs=43.1
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC--CceEEEEEccCCCCCcEEE--eeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG--EKRYVKYGEKKDQMGHVAV--ASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~--~~~~V~yg~~~~~~~~~~~--a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
..|+.+++.-. .+++++|.|..... ....|+|............ ....... .++.....
T Consensus 5 p~~~~l~v~~~-t~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 67 (101)
T d2cuia1 5 PRLSQLSVTDV-TTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM----------------VPGTRHSA 67 (101)
T ss_dssp CCCCCCEEESC-CSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEE----------------EETTCCEE
T ss_pred cCCCCcEEEEE-CCCEEEEEEEeccccccceEEEEEecCCCceeeccCCcceeEee----------------cccceeEE
Confidence 34555665544 36889999965432 2356777765432110000 0000000 01223456
Q ss_pred EEcCCCCCcEEEEEEecC
Q 006938 175 VIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~ 192 (625)
+|+||+|+++|.++|..-
T Consensus 68 ~v~~L~p~t~Y~~~V~a~ 85 (101)
T d2cuia1 68 VLRDLRSGTLYSLTLYGL 85 (101)
T ss_dssp EECSCCTTCEEEEEEEEE
T ss_pred EeCCCCcCCEEEEEEEEE
Confidence 789999999999999864
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.77 E-value=0.46 Score=39.01 Aligned_cols=101 Identities=5% Similarity=0.001 Sum_probs=56.2
Q ss_pred CCCCceeEEEEecCCCCceEEEEEecC--C---CceEEEEEccCCCCCcEEE--eeEEEEeeccccCCCCCCcccccCCc
Q 006938 97 DGTGPRAGALGFTEDASEMRVMFLAED--G---EKRYVKYGEKKDQMGHVAV--ASVERYERGQMCDKPANSSIGWRDPG 169 (625)
Q Consensus 97 ~~~~P~qv~L~~~~~~~~~~V~W~T~~--~---~~~~V~yg~~~~~~~~~~~--a~~~~y~~~~~~~~~a~~~~g~~~~~ 169 (625)
.+..|..|.++. ..+++.|+|.-.. + ..-.|+|............ .....+.. +.. .. ...+
T Consensus 7 ~P~aP~~v~v~~--~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~------~~~-~~--~~~~ 75 (123)
T d1wfta_ 7 GPGAPSTVRISK--NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCG------LKT-SC--TVTA 75 (123)
T ss_dssp CCCCCEEEEEEE--CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEE------SCS-EE--EEEH
T ss_pred CCcCCcccEEEe--CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecC------Cce-eE--eecC
Confidence 345688888765 3678999998432 2 2456888776543211000 00001110 000 00 0001
Q ss_pred eEEEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCCC
Q 006938 170 WIFDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNED 208 (625)
Q Consensus 170 ~~h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~~ 208 (625)
.....++++|+|+|.|.+||..-. +.+|+...|+|....
T Consensus 76 ~~~~~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~ 118 (123)
T d1wfta_ 76 GQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKS 118 (123)
T ss_dssp HHHTTCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCS
T ss_pred CccEEEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCC
Confidence 112335789999999999999743 357788889886543
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.72 E-value=0.12 Score=40.47 Aligned_cols=70 Identities=9% Similarity=-0.015 Sum_probs=41.5
Q ss_pred CceeEEEEecCCCCceEEEEEecCCC---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDGE---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVI 176 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~l 176 (625)
.|..+.+.-. .++++.|.|...... .-.|+|.......... .... +.....++|
T Consensus 8 ~P~~l~v~~~-t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~------------------~~~~t~~~i 64 (95)
T d2fnba_ 8 QLTDLSFVDI-TDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIF----EDFV------------------DSSVGYYTV 64 (95)
T ss_dssp CCTTCEEECC-CSSCEEEECCCCCCSSCCEEEEEEEEETSCCEEE----EEEC------------------CSSCSEEEE
T ss_pred cCCCeEEEEE-cCCEEEEEEEecCCceEEeEEEEEEEeeccceEE----EEEe------------------CCCCeEEEE
Confidence 3555655333 368899999754322 2457776654321110 0110 112236679
Q ss_pred cCCCCCcEEEEEEecC
Q 006938 177 KGLKKGVRYYYKVGSD 192 (625)
Q Consensus 177 tgL~PgT~Y~YrV~~~ 192 (625)
+||+||+.|.++|..-
T Consensus 65 ~~L~p~t~Y~~~V~a~ 80 (95)
T d2fnba_ 65 TGLEPGIDYDISVITL 80 (95)
T ss_dssp CCCCTTSEEEEEEEEE
T ss_pred ecccCCEEEEEEEEEE
Confidence 9999999999999863
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.67 E-value=0.11 Score=41.32 Aligned_cols=71 Identities=15% Similarity=0.156 Sum_probs=43.4
Q ss_pred CCceeEEEEecCCCCceEEEEEecC--C---C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED--G---E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~--~---~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
..|..+.+.-. ..++++|.|.... . . .-.|+|...++..... .. . ......
T Consensus 3 ~~P~~~~v~~~-~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~-------~~----------~-----~~~~~~ 59 (98)
T d1x5ya1 3 SAPQHLTVEDV-TDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVP-------AN----------K-----EPVERC 59 (98)
T ss_dssp CCCEEEEEEEE-CSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEE-------SS----------S-----SCBSSS
T ss_pred CCCcCcEEEEc-cCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEE-------ee----------e-----ecCcee
Confidence 35777776643 3589999998432 1 1 2567887765432111 00 0 011113
Q ss_pred EEEEcCCCCCcEEEEEEecC
Q 006938 173 DAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~ 192 (625)
.++++||+||+.|.|||..-
T Consensus 60 ~~~v~~L~~~~~Y~frV~A~ 79 (98)
T d1x5ya1 60 GFTVKDLPTGARILFRVVGV 79 (98)
T ss_dssp EEEEECCCTTCCEEEEEEEE
T ss_pred EEEECCCcCCeEEEEEEEEE
Confidence 56789999999999999964
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.43 E-value=0.3 Score=37.88 Aligned_cols=82 Identities=17% Similarity=0.174 Sum_probs=48.0
Q ss_pred CceeEEEEecCCCCceEEEEEecC--CCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEc
Q 006938 100 GPRAGALGFTEDASEMRVMFLAED--GEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIK 177 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~--~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~lt 177 (625)
.|..+.+.-- ..++++|.|.... ...-.++|....+.. . .... . ..+.....+++
T Consensus 4 ~P~~l~v~~v-t~~sv~l~W~~p~~~~~~y~i~~~~~~~~~------~--~~~~-----~---------~~~~~~~~~i~ 60 (94)
T d1j8ka_ 4 RPKGLAFTDV-DVDSIKIAWESPQGQVSRYRVTYSSPEDGI------H--ELFP-----A---------PDGEEDTAELQ 60 (94)
T ss_dssp CCCCCEEEEE-ETTEEEEECCCCSSCCSCEEEEEEETTTEE------E--EECC-----C---------CCSSCCEEEEC
T ss_pred CCCCCEEEEe-cCCEEEEEEeCCCccccceEEEEEeecCCC------c--eEEE-----e---------cCCCccEEEEC
Confidence 4777776533 2579999997543 233567777655321 0 0000 0 01223467799
Q ss_pred CCCCCcEEEEEEecCC-CCcce--eEEEEc
Q 006938 178 GLKKGVRYYYKVGSDS-KGWSE--THSFVS 204 (625)
Q Consensus 178 gL~PgT~Y~YrV~~~~-~~~S~--~~~F~T 204 (625)
||+|||.|.++|..-. .+.|+ ..+++|
T Consensus 61 ~L~p~t~Y~~~V~a~~~~g~S~p~~~~~~T 90 (94)
T d1j8ka_ 61 GLRPGSEYTVSVVALHDDMESQPLIGTQST 90 (94)
T ss_dssp SCCCCSEEEEEEEECSSSCCCCCEEEEEEC
T ss_pred CCCCCCEEEEEEEEEeCCCCcCCEEEEEEE
Confidence 9999999999998643 23443 234555
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.32 E-value=0.32 Score=38.90 Aligned_cols=79 Identities=6% Similarity=-0.130 Sum_probs=45.5
Q ss_pred CCceeEEEEecCCCCceEEEEEecC----CCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED----GEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~----~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
..|..|+.-.....++|+++|.... +....+.|................... ........+
T Consensus 6 ~~P~~v~~i~~~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 70 (107)
T d1cd9b1 6 ASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVA---------------KKRQNNCSI 70 (107)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEEC---------------CTTCCEEEE
T ss_pred CCCcCCEEEEecCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeeeecc---------------ccCccccEE
Confidence 4577676333345689999998543 233456665544321111100000000 012345788
Q ss_pred EEcCCCCCcEEEEEEecC
Q 006938 175 VIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~ 192 (625)
++++|+|++.|.+||...
T Consensus 71 ~~~~L~~~t~Y~frV~A~ 88 (107)
T d1cd9b1 71 PRKNLLLYQYMAIWVQAE 88 (107)
T ss_dssp EGGGCCTTSCEEEEEEEE
T ss_pred EcCCCCcCceEEEEEEEE
Confidence 899999999999999975
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=92.02 E-value=4.7 Score=37.40 Aligned_cols=189 Identities=20% Similarity=0.278 Sum_probs=100.6
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC-C-chhhHHHHHHhHHHhhcCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR-G-YSWLWDEFFALIEPVASRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~-g-~~~~wd~f~~~l~~~~~~iP~~ 290 (625)
+++++||.=. ......++..+..+ +.+.||||..|.++-.+ | .....++++ ...+-++
T Consensus 2 kiLfiGDIvG-----------~~Gr~~v~~~Lp~L---k~~~DfVIaNgENaa~G~Git~k~~~~L~------~~GVDvI 61 (252)
T d2z06a1 2 RVLFIGDVMA-----------EPGLRAVGLHLPDI---RDRYDLVIANGENAARGKGLDRRSYRLLR------EAGVDLV 61 (252)
T ss_dssp EEEEECCBCH-----------HHHHHHHHHHHHHH---GGGCSEEEEECTTTTTTSSCCHHHHHHHH------HHTCCEE
T ss_pred eEEEEeccCC-----------HHHHHHHHHHhHHH---HhhCCEEEEeeeccCCCcCCCHHHHHHHH------HhCCCEE
Confidence 6888999722 12234444444444 45689999999997543 1 123333332 2466665
Q ss_pred EccCCCCCCCCCCCCCCCCCCCccCCCCCCcccccccc--ccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc
Q 006938 291 VCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSL--KFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET 368 (625)
Q Consensus 291 ~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~--~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~ 368 (625)
+.|||=++... ++ .|.. +.--|.|-+. +. | +..|+-|+.++-++.++|-..
T Consensus 62 -T~GNH~wdkke----------i~----------~~i~~~~llRP~N~p~--~~--P--G~G~~i~~~~g~ki~ViNl~G 114 (252)
T d2z06a1 62 -SLGNHAWDHKE----------VY----------ALLESEPVVRPLNYPP--GT--P--GKGFWRLEVGGESLLFVQVMG 114 (252)
T ss_dssp -ECCTTTTSCTT----------HH----------HHHHHSSEECCTTSCS--SC--S--SCSEEEEEETTEEEEEEEEEC
T ss_pred -EcCcccccchh----------hh----------hhhccccccchhhccC--CC--C--CCcEEEEccCCceEEEEEecc
Confidence 69999986321 01 0111 1222333221 11 1 345778888887777776421
Q ss_pred c-c-CCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCceee
Q 006938 369 N-F-LQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYERF 446 (625)
Q Consensus 369 ~-~-~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~yeR~ 446 (625)
. + ...+.-.+-+++.|+. .+.+.+||=+|.=.- .++ .+| -.+..-+|.+|+-=|+|.-.
T Consensus 115 r~fm~~~d~PF~~~d~~~~~---~~~~~i~VDfHaEaT-----------SEK--~A~-g~~ldGrvsavvGTHTHV~T-- 175 (252)
T d2z06a1 115 RIFMDPLDDPFRALDRLLEE---EKADYVLVEVHAEAT-----------SEK--MAL-AHYLDGRASAVLGTHTHVPT-- 175 (252)
T ss_dssp CTTSCCCCCHHHHHHHHHHH---CCCSEEEEEEECSCH-----------HHH--HHH-HHHHBTTBSEEEEESSCSCB--
T ss_pred cccCCCCCCHHHHHHHHHhh---cCccEEEEEcccchh-----------hhh--eee-eEecCCCEEEEEecCccccc--
Confidence 1 1 1112222333444443 345678888886211 121 122 24445689999999999732
Q ss_pred eccCCccccCCCCCCCCCCCCcEEEE-ECCCCCC
Q 006938 447 CPLNNFTCGSMGMDGEPSEAFPVHIV-IGMAGQD 479 (625)
Q Consensus 447 ~p~~~~~~~~~~~~~~~~~~g~vyIv-~G~gG~~ 479 (625)
.+.++. |+|+-|+. +|+.|..
T Consensus 176 ---aD~rIL---------p~GTayiTDvGM~G~~ 197 (252)
T d2z06a1 176 ---LDATRL---------PKGTLYQTDVGMTGTY 197 (252)
T ss_dssp ---SCCEEC---------TTSCEEESCCCCBEES
T ss_pred ---cccEEe---------cCCeEEEccCccccch
Confidence 222221 58888885 4777753
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.70 E-value=0.089 Score=41.83 Aligned_cols=74 Identities=18% Similarity=0.099 Sum_probs=42.1
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC---------CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCc
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG---------EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPG 169 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~---------~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~ 169 (625)
..|..|.+....+++.+.|.|..... ..-.|+|....+....+...
T Consensus 3 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~------------------------- 57 (94)
T d3d85d3 3 DPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVF------------------------- 57 (94)
T ss_dssp CCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEE-------------------------
T ss_pred CCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEecc-------------------------
Confidence 46899999887667889999986542 23578887665432221110
Q ss_pred eEEEEEEcCCCCCcEEEEEEecC----CCCccee
Q 006938 170 WIFDAVIKGLKKGVRYYYKVGSD----SKGWSET 199 (625)
Q Consensus 170 ~~h~a~ltgL~PgT~Y~YrV~~~----~~~~S~~ 199 (625)
...++..|.|++.|.+||... .+.||+.
T Consensus 58 --~~~t~~~L~p~~~Y~v~VRa~~~~~~g~WSeW 89 (94)
T d3d85d3 58 --TDKTSATVICRKNASISVRAQDRYYSSSWSEW 89 (94)
T ss_dssp --ESSSEEEECCCSSCEEEEEEEESSSCCCCCCC
T ss_pred --ccceEEEecCCCCEEEEEEEecCCCCCCCccC
Confidence 001123488999999999973 2456654
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.40 E-value=0.22 Score=40.66 Aligned_cols=86 Identities=10% Similarity=0.089 Sum_probs=49.9
Q ss_pred CCCceeEEEEecCCCCceEEEEEecC--C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEE
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAED--G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIF 172 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~--~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h 172 (625)
+..|..+.+.-. .++++.|.|.... + ..-.|+|........... ..... ....
T Consensus 21 P~~P~~~~~~~~-~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~---~~~~~------------------~~~~ 78 (117)
T d1wfoa1 21 PGPPMGILFPEV-RTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTAT---VEVLA------------------PSAR 78 (117)
T ss_dssp CCCCCCCEEEEE-CSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCC---EEEEC------------------TTCC
T ss_pred CcCCCCcEEEEe-cCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEe---EEecC------------------CceE
Confidence 345777766544 3689999997432 2 124577766554321100 01110 1113
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSR 205 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~ 205 (625)
..+++||+|+|.|.+||..-. +.+|+...++|.
T Consensus 79 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT~ 115 (117)
T d1wfoa1 79 QYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE 115 (117)
T ss_dssp EEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEECC
Confidence 456899999999999999642 235666666653
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.39 E-value=0.2 Score=38.88 Aligned_cols=58 Identities=24% Similarity=0.229 Sum_probs=36.5
Q ss_pred CCceEEEEEecC-C-CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcEEEEEE
Q 006938 112 ASEMRVMFLAED-G-EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRYYYKV 189 (625)
Q Consensus 112 ~~~~~V~W~T~~-~-~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~Y~YrV 189 (625)
+++++|.|.... + ..-.|+|....+..... ..... +-...++|+||+||+.|.++|
T Consensus 10 ~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~----~~~~~------------------~~~t~~~l~~L~p~t~Y~~~V 67 (91)
T d1fnaa_ 10 PTSLLISWDAPAVTVRYYRITYGETGGNSPVQ----EFTVP------------------GSKSTATISGLKPGVDYTITV 67 (91)
T ss_dssp SSCEEEECCCCSSCCSEEEEEEEETTCCSCCE----EEEEE------------------TTCCEEEECSCCTTCEEEEEE
T ss_pred CCEEEEEEEccceEecEEEEEEEcCCCCceeE----EEEeC------------------CCccEEEeCCCCCCCEEEEEE
Confidence 578889996543 2 23568887765432111 11111 112367899999999999999
Q ss_pred ec
Q 006938 190 GS 191 (625)
Q Consensus 190 ~~ 191 (625)
..
T Consensus 68 ~a 69 (91)
T d1fnaa_ 68 YA 69 (91)
T ss_dssp EE
T ss_pred EE
Confidence 86
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.15 E-value=0.11 Score=41.29 Aligned_cols=67 Identities=13% Similarity=0.196 Sum_probs=38.2
Q ss_pred ceeEEEEecCCCCceEEEEEecCCC------ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 101 PRAGALGFTEDASEMRVMFLAEDGE------KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 101 P~qv~L~~~~~~~~~~V~W~T~~~~------~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
|.-|++ ....+++.|.|...... .-.|+|....+...... ...- .-...+
T Consensus 8 Pp~l~v--~~~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~---~~~~-------------------~~~~~~ 63 (100)
T d2gysa4 8 PPSLQV--TKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSK---TETL-------------------QNAHSM 63 (100)
T ss_dssp CCEEEE--C---CCCEEEEEC--------CEEEEEEEECSSSCSTTSC---EEEE-------------------ESCSEE
T ss_pred CCccEE--EECCCEEEEEEecCcccCCccceEEEEEEeecccceecee---eccc-------------------CCceEE
Confidence 444554 44557899999865421 35688876554322110 0000 011467
Q ss_pred EEcCCCCCcEEEEEEec
Q 006938 175 VIKGLKKGVRYYYKVGS 191 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~ 191 (625)
+|.+|+|++.|.+||..
T Consensus 64 ~l~~L~p~t~Y~~rVRa 80 (100)
T d2gysa4 64 ALPALEPSTRYWARVRV 80 (100)
T ss_dssp ECCCCCSSCCCEEEEEE
T ss_pred EeCCCCCCCeEEEEEEE
Confidence 79999999999999986
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=90.24 E-value=5 Score=37.86 Aligned_cols=200 Identities=14% Similarity=0.109 Sum_probs=103.3
Q ss_pred cceEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC-C-chhhHHHHHHhHHHhhcCCc
Q 006938 211 ETIAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR-G-YSWLWDEFFALIEPVASRVA 288 (625)
Q Consensus 211 ~~~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~-g-~~~~wd~f~~~l~~~~~~iP 288 (625)
..+++++||.=. ......++..+..+.+ +.++||||..|-++-.+ | .....++++ ...+-
T Consensus 4 ~MkILfiGDIvG-----------~~GR~~v~~~Lp~Lr~-~~~iDfVIaNgENaa~G~Git~k~~~eL~------~~GvD 65 (281)
T d1t71a_ 4 SIKFIFLGDVYG-----------KAGRNIIKNNLAQLKS-KYQADLVIVNAENTTHGKGLSLKHYEFLK------EAGVN 65 (281)
T ss_dssp CCEEEEECEEBH-----------HHHHHHHHTTHHHHHH-HHTCSEEEEECTBTTTTSSCCHHHHHHHH------HHTCC
T ss_pred cceEEEEEccCC-----------HHHHHHHHHHhHHHHH-HhCCCEEEECCccCCCCcCCCHHHHHHHH------HhCCc
Confidence 468999999722 1223445555555544 35899999999997543 2 122222222 34666
Q ss_pred eEEccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccccccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeCCc
Q 006938 289 YHVCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYSLKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYISTET 368 (625)
Q Consensus 289 ~~~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT~~ 368 (625)
++ +.|||=++... ... |-.+ ..+.-.|.|-+......+| +..|+.++.++-.+.+++-..
T Consensus 66 vI-T~GNH~wd~ke------i~~--~i~~---------~~~llRP~N~p~~~p~~~p--G~G~~i~~~~~~~i~Vinl~G 125 (281)
T d1t71a_ 66 YI-TMGNHTWFQKL------DLA--VVIN---------KKDLVRPLNLDTSFAFHNL--GQGSLVFEFNKAKIRITNLLG 125 (281)
T ss_dssp EE-ECCTTTTCCGG------GHH--HHTT---------CTTEECBSCBCTTSTTTTS--SBSEEEEECSSCEEEEEEEEC
T ss_pred EE-EcCchhhhchh------hHH--HHhh---------cccccccccccccccCCCC--CceEEEEEccccceeeeeecc
Confidence 65 69999876321 000 0000 1122223332210000011 345777887766666665421
Q ss_pred c-cC---CChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 369 N-FL---QGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 369 ~-~~---~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
. +. .......-+++.+.. .+++.+||=+|.=.- .++ .+| -.+.+-+|.+|+-=|+|.-.
T Consensus 126 ~~fm~~~~~~~pf~~~~~~~~~---~~~d~i~VDfHaEAT-----------SEK--~A~-g~~lDGrvsaVvGTHTHV~T 188 (281)
T d1t71a_ 126 TSVPLPFKTTNPFKVLKELILK---RDCDLHIVDFHAETT-----------SEK--NAF-CMAFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp TTSCCSSCBCCHHHHHHHHHTT---CCCSEEEEEEECSCH-----------HHH--HHH-HHHHTTTSSEEEEESSSSCC
T ss_pred ccccccccccHHHHHHHHhhcc---cCCCeEEEEeccchh-----------hhh--hhh-eeeeCCcEEEEEecCccccc
Confidence 1 11 112233334444433 456778988886211 121 122 23445689999999999732
Q ss_pred eeeccCCccccCCCCCCCCCCCCcEEEE-ECCCCCC
Q 006938 445 RFCPLNNFTCGSMGMDGEPSEAFPVHIV-IGMAGQD 479 (625)
Q Consensus 445 R~~p~~~~~~~~~~~~~~~~~~g~vyIv-~G~gG~~ 479 (625)
.+.++. ++|+-|++ .|+.|..
T Consensus 189 -----aD~rIL---------p~GTAyiTDvGMtG~~ 210 (281)
T d1t71a_ 189 -----ADLRIT---------PKGSAYITDVGMCGPG 210 (281)
T ss_dssp -----TTCEEC---------TTSCEEESCCCEEBCC
T ss_pred -----Cccccc---------cCCeEEEecCccccCc
Confidence 222221 57888885 3666753
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=90.05 E-value=7.4 Score=36.12 Aligned_cols=190 Identities=17% Similarity=0.165 Sum_probs=101.6
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCC-C-chhhHHHHHHhHHHhhcCCceE
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYAR-G-YSWLWDEFFALIEPVASRVAYH 290 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~-g-~~~~wd~f~~~l~~~~~~iP~~ 290 (625)
+++++||.=. ......++..+..+ +.+.||||..|.++-.+ | .....++++ ...+-++
T Consensus 2 kILfiGDIvG-----------~~Gr~~v~~~Lp~l---k~~~DfVIaNgENaa~G~Git~~~~~~l~------~~GvDvi 61 (255)
T d1t70a_ 2 RVLFIGDVFG-----------QPGRRVLQNHLPTI---RPQFDFVIVNMENSAGGFGMHRDAARGAL------EAGAGCL 61 (255)
T ss_dssp EEEEECCBBH-----------HHHHHHHHHHHHHH---GGGCSEEEEECTBTTTTSSCCHHHHHHHH------HHTCSEE
T ss_pred eEEEEecCCC-----------HHHHHHHHHHhHHH---HhhCCEEEECCccCCCCcCCCHHHHHHHH------HcCCcEE
Confidence 6888999622 12234455555444 44689999999997543 1 123333332 2466665
Q ss_pred EccCCCCCCCCCCCCCCCCCCCccCCCCCCccccccc----cccccCCCCCCCCCCCCCCCCCceEEEEeCcEEEEEEeC
Q 006938 291 VCIGNHEYDWPLQPWKPDWSYTVYGTDGGGECGVPYS----LKFHMPGNSLEPTGTRAPATRNLYYSFDMGVVHFVYIST 366 (625)
Q Consensus 291 ~v~GNHD~~~~~~~~~~~~~~~~Y~~d~gge~~~~y~----~~f~~P~~~~~~~G~~~~~~~~~yYsfd~G~v~fI~LDT 366 (625)
+.|||=++... ++ .|. .+..-|.|.+.+ +. | +..|+-|+..+.++.++|-
T Consensus 62 -T~GNH~wdkke----------i~----------~~i~~~~~~ilRP~N~p~~-~~--P--G~G~~i~~~~g~ki~ViNl 115 (255)
T d1t70a_ 62 -TLGNHAWHHKD----------IY----------PMLSEDTYPIVRPLNYADP-GT--P--GVGWRTFDVNGEKLTVVNL 115 (255)
T ss_dssp -ECCTTTTSSTT----------HH----------HHHHTTCSCEECCSCCCCT-TC--S--SCSEEEEECSSSEEEEEEE
T ss_pred -EcCchhhcchh----------HH----------HHHhhcchhhhhhhccCCC-CC--C--CceEEEEeeccCcEEEEEe
Confidence 69999986321 01 111 112233332110 00 1 3357778877767777663
Q ss_pred C--cccCCChHHHHHHHHHhhccccCCCCeEEEEcccCCccCCCCCCChhhhHHHHHHHHHHHHHcCceEEEEcCccCce
Q 006938 367 E--TNFLQGSNQYNFIKHDLESVDRKKTPFVVVQGHRPMYTTSNENRDAPLRNRMLEHLEPLFVENNVTLALWGHVHRYE 444 (625)
Q Consensus 367 ~--~~~~~~~~Q~~WL~~~L~~~~r~~~~wiIV~~H~P~y~~~~~~~d~~~~~~~~~~l~~l~~ky~VdlvlsGH~H~ye 444 (625)
. ....+.+.-.+-+++.|++ .+.+.+||=+|.=.- .++ .+| -.+-.-+|.+|+-=|+|.-.
T Consensus 116 ~Gr~fM~~~d~PF~~~d~~l~~---~~~~~i~VDfHaEaT-----------SEK--~A~-g~~ldGrvsav~GTHTHV~T 178 (255)
T d1t70a_ 116 LGRVFMEAVDNPFRTMDALLER---DDLGTVFVDFHAEAT-----------SEK--EAM-GWHLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp ECCTTSCCCSCHHHHHHHHTTC---SSCCEEEEEEECSCH-----------HHH--HHH-HHHHTTSSSEEEEESSCSCB
T ss_pred ccccccCcccCHHHHHHHHHhh---cCCCeEEEEccchhH-----------HHH--HHH-HhhhcCcEEEEEecCccccc
Confidence 2 1111222334445666654 345668888886211 121 122 23445689999999999732
Q ss_pred eeeccCCccccCCCCCCCCCCCCcEEEE-ECCCCCC
Q 006938 445 RFCPLNNFTCGSMGMDGEPSEAFPVHIV-IGMAGQD 479 (625)
Q Consensus 445 R~~p~~~~~~~~~~~~~~~~~~g~vyIv-~G~gG~~ 479 (625)
.+.++. ++|+.|+. +|+.|..
T Consensus 179 -----aD~rIl---------p~GTay~TDvGMtG~~ 200 (255)
T d1t70a_ 179 -----ADTRIL---------KGGTAYQTDAGFTGPH 200 (255)
T ss_dssp -----SCCEEE---------TTTEEEESCCCCBEES
T ss_pred -----ccceEe---------cCCcEEEecCccccch
Confidence 111211 57888885 4777763
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.91 E-value=0.36 Score=39.37 Aligned_cols=71 Identities=10% Similarity=0.053 Sum_probs=41.0
Q ss_pred CCceeEEEEecCCCCceEEEEEecCC----C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAEDG----E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~~----~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+.+.-. ..+++.|.|.-... . .-.|+|............. .-. . ...
T Consensus 17 ~pP~~~~v~~~-~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~-----------------~--~~~ 73 (117)
T d1uema_ 17 GPPSKPQVTDV-TKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA---NHV-----------------K--TTL 73 (117)
T ss_dssp BCCCCCEEEEE-CSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE---EEE-----------------C--SSE
T ss_pred cCCCCCEEEEc-cCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEec---ccc-----------------c--ccc
Confidence 45777776543 35789999964321 1 2456776554321110000 000 0 124
Q ss_pred EEEcCCCCCcEEEEEEecC
Q 006938 174 AVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~ 192 (625)
.+|+||+|+|.|.+||..-
T Consensus 74 ~~v~~L~p~t~Y~frV~A~ 92 (117)
T d1uema_ 74 YTVRGLRPNTIYLFMVRAI 92 (117)
T ss_dssp EEECSCCTTCEEEEEEEEE
T ss_pred ceECCCCCCCEEEEEEEEE
Confidence 5689999999999999863
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.77 E-value=0.63 Score=35.98 Aligned_cols=59 Identities=10% Similarity=0.172 Sum_probs=36.9
Q ss_pred CCCceEEEEEecC--C---CceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEEEEcCCCCCcEE
Q 006938 111 DASEMRVMFLAED--G---EKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDAVIKGLKKGVRY 185 (625)
Q Consensus 111 ~~~~~~V~W~T~~--~---~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a~ltgL~PgT~Y 185 (625)
..+++.|.|.-.. + ..-.|+|.......... ..+. .-....+|+||+|++.|
T Consensus 12 ~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~-----~~~~------------------~~~~~~~i~~L~p~t~Y 68 (94)
T d2dn7a1 12 AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNT-----IDFG------------------KDDQHFTVTGLHKGTTY 68 (94)
T ss_dssp STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEE-----EEEE------------------TTCCEEEEECCCTTCEE
T ss_pred eCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEE-----EEcC------------------CCccEEEEEccCCeeEE
Confidence 4589999998543 1 13457887665432221 1111 01134568999999999
Q ss_pred EEEEecC
Q 006938 186 YYKVGSD 192 (625)
Q Consensus 186 ~YrV~~~ 192 (625)
.+||..-
T Consensus 69 ~~~V~A~ 75 (94)
T d2dn7a1 69 IFRLAAK 75 (94)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999963
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.42 E-value=0.14 Score=42.22 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=27.9
Q ss_pred EEEEcCCCCCcEEEEEEecCC----CCcceeEEEEcCCC
Q 006938 173 DAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVSRNE 207 (625)
Q Consensus 173 ~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T~p~ 207 (625)
..+|++|+|+|.|.+||..-. +.+|+...++|.+.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCC
Confidence 456899999999999999732 35778888988754
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.39 E-value=0.23 Score=39.41 Aligned_cols=21 Identities=19% Similarity=0.404 Sum_probs=18.2
Q ss_pred EEEEEcCCCCCcEEEEEEecC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
...+++||+|+|+|.|||..-
T Consensus 60 ~~~~i~~L~p~t~Y~frV~A~ 80 (104)
T d1bpva_ 60 NEFTVSGLTEDAAYEFRVIAK 80 (104)
T ss_dssp SEEEECSCCSSCCEEEEEEEE
T ss_pred eEEEEcCCCCCCEEEEEEEEE
Confidence 456789999999999999973
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=87.75 E-value=1 Score=35.62 Aligned_cols=72 Identities=14% Similarity=0.077 Sum_probs=43.7
Q ss_pred CCceeEEEEecCCCCceEEEEEec---C-C--C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAE---D-G--E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWI 171 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~---~-~--~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~ 171 (625)
..|..|.+.-. .+++++|.|.-. . + . .-.|+|........... .... ....
T Consensus 6 ~~P~~v~~~~~-~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~----~~~~-----------------~~~~ 63 (105)
T d1cfba2 6 KNPDNVVGQGT-EPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWEN----NNIF-----------------DWRQ 63 (105)
T ss_dssp CCCSCCEEECS-STTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEE----EEEC-----------------CTTC
T ss_pred CCCcCeEEEEc-cCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeE----EEec-----------------CCCc
Confidence 35777776544 468999999632 1 1 1 34578876553321111 0110 1123
Q ss_pred EEEEEcCCCCCcEEEEEEecC
Q 006938 172 FDAVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 172 h~a~ltgL~PgT~Y~YrV~~~ 192 (625)
...+|++|+|+|.|.+||..-
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~ 84 (105)
T d1cfba2 64 NNIVIADQPTFVKYLIKVVAI 84 (105)
T ss_dssp CEEEECSCCSSCEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEE
Confidence 467799999999999999964
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.52 E-value=0.54 Score=36.98 Aligned_cols=75 Identities=16% Similarity=0.164 Sum_probs=41.7
Q ss_pred CceeEEEEecCCCCceEEEEEecCC----C-ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEEE
Q 006938 100 GPRAGALGFTEDASEMRVMFLAEDG----E-KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFDA 174 (625)
Q Consensus 100 ~P~qv~L~~~~~~~~~~V~W~T~~~----~-~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~a 174 (625)
.|..+++... .++++.|.|.-... . .-.|+|.......... ........ ...-...+
T Consensus 5 ~P~~~~~~~~-~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~--~~~~~~~~---------------~~~~~~~~ 66 (103)
T d1qg3a2 5 EPGRLAFNVV-SSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVLV---------------DNPKNRML 66 (103)
T ss_dssp CCCCCEEEEE-ETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBC--SCCEEEEE---------------CCTTCCEE
T ss_pred cCCCcEEEEe-cCCEEEEEEEECccCCCCceEEEEEeeccccccccc--cceEEEEe---------------cCCCceEE
Confidence 4666666554 35789999974431 1 2456776554321110 00001100 00112367
Q ss_pred EEcCCCCCcEEEEEEecC
Q 006938 175 VIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 175 ~ltgL~PgT~Y~YrV~~~ 192 (625)
+++||+|++.|.+||..-
T Consensus 67 ~i~~L~p~t~Y~~~V~A~ 84 (103)
T d1qg3a2 67 LIENLRESQPYRYTVKAR 84 (103)
T ss_dssp EECCCCTTCCEEEEEEEE
T ss_pred EEeecCCCCEEEEEEEEE
Confidence 899999999999999963
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.23 E-value=0.55 Score=37.29 Aligned_cols=71 Identities=11% Similarity=0.097 Sum_probs=41.4
Q ss_pred CCceeEEEEecCCCCceEEEEEecC--CC---ceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCceEEE
Q 006938 99 TGPRAGALGFTEDASEMRVMFLAED--GE---KRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGWIFD 173 (625)
Q Consensus 99 ~~P~qv~L~~~~~~~~~~V~W~T~~--~~---~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~~h~ 173 (625)
..|..+++.-. ..+++.|.|.... ++ .-.|+|.......... .... .+-...
T Consensus 12 ~~p~~l~~~~~-~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~----~~~~------------------~~~~~~ 68 (106)
T d1wfna1 12 GPVGHLSFSEI-LDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRV----THYL------------------PNVTLE 68 (106)
T ss_dssp CCCSCCEEESC-CSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCC----CEEE------------------CSSCCE
T ss_pred cCCCCcEEEEe-cCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceE----EEec------------------CCCeeE
Confidence 35666665433 3578999997432 11 2457776554321100 0000 112246
Q ss_pred EEEcCCCCCcEEEEEEecC
Q 006938 174 AVIKGLKKGVRYYYKVGSD 192 (625)
Q Consensus 174 a~ltgL~PgT~Y~YrV~~~ 192 (625)
.+|+||+|++.|.+||..-
T Consensus 69 ~~i~~L~p~t~Y~~~V~A~ 87 (106)
T d1wfna1 69 YRVTGLTALTTYTIEVAAM 87 (106)
T ss_dssp EEEESCCTTCEEEEEEEEE
T ss_pred EEEccCCCCCEEEEEEEEE
Confidence 6789999999999999853
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.07 E-value=0.22 Score=40.97 Aligned_cols=86 Identities=12% Similarity=-0.046 Sum_probs=50.6
Q ss_pred CCCceeEEEEecCCCCceEEEEEecC-------CCceEEEEEccCCCCCcEEEeeEEEEeeccccCCCCCCcccccCCce
Q 006938 98 GTGPRAGALGFTEDASEMRVMFLAED-------GEKRYVKYGEKKDQMGHVAVASVERYERGQMCDKPANSSIGWRDPGW 170 (625)
Q Consensus 98 ~~~P~qv~L~~~~~~~~~~V~W~T~~-------~~~~~V~yg~~~~~~~~~~~a~~~~y~~~~~~~~~a~~~~g~~~~~~ 170 (625)
...|..|.+.....++++.|+|.... .....+.|....+.. . ...... ..+-
T Consensus 11 p~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~-~-----~~~~~~---------------~~~~ 69 (117)
T d2cspa1 11 PAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQ-R-----VAEVIF---------------PTAD 69 (117)
T ss_dssp CCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSS-E-----EEEECC---------------TTCS
T ss_pred CCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeecc-c-----ceeeee---------------eccc
Confidence 34578887766556789999997531 123456676543211 1 011110 0123
Q ss_pred EEEEEEcCCCCCcEEEEEEecCC----CCcceeEEEEc
Q 006938 171 IFDAVIKGLKKGVRYYYKVGSDS----KGWSETHSFVS 204 (625)
Q Consensus 171 ~h~a~ltgL~PgT~Y~YrV~~~~----~~~S~~~~F~T 204 (625)
...++|+||+|+|.|.+||..-. +.+|+.-.++|
T Consensus 70 ~~~~~i~~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t 107 (117)
T d2cspa1 70 STAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPP 107 (117)
T ss_dssp EEEEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCCCH
T ss_pred eeeeeccCCCCCcEEEEEEEEEcCCCcCCCCCCEEeeC
Confidence 45678999999999999998632 23555555544
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.63 E-value=1.4 Score=42.88 Aligned_cols=69 Identities=20% Similarity=0.191 Sum_probs=39.0
Q ss_pred eEEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCC--cEEEEcCccccCCCchhhHHHHHHhH-HHhhcCCce
Q 006938 213 IAFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKP--AFVSHIGDISYARGYSWLWDEFFALI-EPVASRVAY 289 (625)
Q Consensus 213 ~f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~p--dfvl~~GDivy~~g~~~~wd~f~~~l-~~~~~~iP~ 289 (625)
.+.++||.|.. ...+-.+++ .....+ .-.|++||+++.+... .+...-.+ -.+.-.--+
T Consensus 61 pv~VvGDiHGq-------------~~DL~~if~---~~g~p~~~~~ylFLGDYVDRG~~s--lEvi~lL~~lKi~yP~~v 122 (324)
T d1s95a_ 61 KITVCGDTHGQ-------------FYDLLNIFE---LNGLPSETNPYIFNGDFVDRGSFS--VEVILTLFGFKLLYPDHF 122 (324)
T ss_dssp EEEEECCCTTC-------------HHHHHHHHH---HHCCCBTTBCEEEESCCSSSSTTH--HHHHHHHHHHHHHSTTTE
T ss_pred CEEEEEECCCC-------------HHHHHHHHH---HCCCCCCCCeEEEecccccCcCcc--eeehHHHHHHHHhCCCcE
Confidence 57889999875 223333433 222222 3478999999765432 22221111 112234458
Q ss_pred EEccCCCCCC
Q 006938 290 HVCIGNHEYD 299 (625)
Q Consensus 290 ~~v~GNHD~~ 299 (625)
+...||||..
T Consensus 123 ~LLRGNHE~~ 132 (324)
T d1s95a_ 123 HLLRGNHETD 132 (324)
T ss_dssp EEECCTTSSH
T ss_pred EeccCCcccc
Confidence 9999999974
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.09 E-value=1.6 Score=41.77 Aligned_cols=68 Identities=21% Similarity=0.189 Sum_probs=39.4
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhH--HHhhcCCceEE
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALI--EPVASRVAYHV 291 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l--~~~~~~iP~~~ 291 (625)
+.++||.|.. ...+..+++... ...-.-.|++||+++.+...- +.. ..+ -.+...--++.
T Consensus 47 v~VvGDlHG~-------------~~DL~~if~~~g--~p~~~~ylFLGDYVDRG~~sl--Evl-~lL~alKi~~P~~v~l 108 (288)
T d3c5wc1 47 VTVCGDVHGQ-------------FHDLMELFRIGG--KSPDTNYLFMGDYVDRGYYSV--ETV-TLLVALKVRYRERITI 108 (288)
T ss_dssp EEEECBCTTC-------------HHHHHHHHHHHC--CTTTSCEEECSCCCCSSSSHH--HHH-HHHHHHHHHCTTTEEE
T ss_pred eEEEeeCCCC-------------HHHHHHHHHhcC--CCccceEEecCcccCCCCcce--eHH-HHHHHHHhhCCCeEEE
Confidence 7899999875 223444544321 111234788999997665432 111 111 12233456999
Q ss_pred ccCCCCCC
Q 006938 292 CIGNHEYD 299 (625)
Q Consensus 292 v~GNHD~~ 299 (625)
..||||..
T Consensus 109 LRGNHE~~ 116 (288)
T d3c5wc1 109 LRGNHESR 116 (288)
T ss_dssp CCCTTSSH
T ss_pred eccCCccc
Confidence 99999974
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=80.18 E-value=2 Score=41.15 Aligned_cols=69 Identities=14% Similarity=0.148 Sum_probs=39.2
Q ss_pred EEEEEecCCCCCCCcccccchhhHHHHHHHHHHHHHhCCCCcEEEEcCccccCCCchhhHHHHHHhH-HHhhcCCceEEc
Q 006938 214 AFLFGDMGAATPYTTFERTQDESISTMKWILRDIEALGDKPAFVSHIGDISYARGYSWLWDEFFALI-EPVASRVAYHVC 292 (625)
Q Consensus 214 f~v~GD~g~~~~~~~~~~~q~~s~~tl~~i~~~i~~~~~~pdfvl~~GDivy~~g~~~~wd~f~~~l-~~~~~~iP~~~v 292 (625)
+.++||.|.. ...+..+.+... . +.-.-.+++||+++.+...- +...-.+ -.+.-.--++..
T Consensus 54 v~VvGDiHG~-------------~~DL~~if~~~g-~-p~~~~ylFLGDYVDRG~~sl--E~i~lL~aLKi~~P~~v~lL 116 (294)
T d1jk7a_ 54 LKICGDIHGQ-------------YYDLLRLFEYGG-F-PPESNYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLL 116 (294)
T ss_dssp EEEECBCTTC-------------HHHHHHHHHHHC-C-TTSSCEEECSCCSSSSSCHH--HHHHHHHHHHHHSTTTEEEC
T ss_pred eEEEEECCCC-------------hHhHHHHHhhcC-C-CccceEEeeccccCCCccch--HHHHHHHHHHhhCCCeEEEe
Confidence 7899999875 223334443221 1 22234678999997654432 2221111 122344569999
Q ss_pred cCCCCCC
Q 006938 293 IGNHEYD 299 (625)
Q Consensus 293 ~GNHD~~ 299 (625)
.||||..
T Consensus 117 RGNHE~~ 123 (294)
T d1jk7a_ 117 RGNHECA 123 (294)
T ss_dssp CCTTSSH
T ss_pred cCCcccc
Confidence 9999975
|