Citrus Sinensis ID: 006942
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 624 | 2.2.26 [Sep-21-2011] | |||||||
| Q9C7A2 | 590 | Ankyrin repeat-containing | no | no | 0.240 | 0.254 | 0.312 | 3e-08 | |
| P0C550 | 935 | Potassium channel AKT1 OS | N/A | no | 0.126 | 0.084 | 0.364 | 4e-05 | |
| Q0JKV1 | 935 | Potassium channel AKT1 OS | no | no | 0.126 | 0.084 | 0.364 | 5e-05 | |
| Q38998 | 857 | Potassium channel AKT1 OS | no | no | 0.155 | 0.113 | 0.330 | 0.0001 | |
| Q71S21 | 1002 | Inversin-B OS=Xenopus lae | N/A | no | 0.161 | 0.100 | 0.336 | 0.0005 |
| >sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 23/173 (13%)
Query: 414 IENLVHPFFREATNDLKQTPREV--FTEEHKELVKEGEKWLKETASSCSVVAALIITVVF 471
I+N VH + K+T + V ++E ++L +EG + +S +VVA L TV F
Sbjct: 382 IKNDVHIQLEQT----KRTNKNVHNISKELRKLHREG---INNATNSVTVVAVLFATVAF 434
Query: 472 AAVFTAPGGSDGRGMPNFLHDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEEDFLV 531
AA+FT PGG + G + SF IF I + LALF+S+ V++ + ++ E
Sbjct: 435 AAIFTVPGGDNNDGSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGETKAE---- 490
Query: 532 SLPKKLIIGLITLFFSIASMM--VAFGATVHISLSHK--WNSVIIPIALVGCV 580
K ++ +I +ASM VAF A+ +I + K W + ++ + VG V
Sbjct: 491 ----KRVVEVINKLMWLASMCTSVAFLASSYIVVGRKNEWAAELVTV--VGGV 537
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Arabidopsis thaliana (taxid: 3702) |
| >sp|P0C550|AKT1_ORYSI Potassium channel AKT1 OS=Oryza sativa subsp. indica GN=AKT1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 56 LASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAAL 115
L +DP DN GHTA ++A+KGN + ++LL++Y D N R EG +P+ +A
Sbjct: 586 LKRGMDPN---ESDNDGHTALHIAASKGNEQCVRLLLEYGAD-PNARDSEGKVPLWEALC 641
Query: 116 YGHKDTFHYLLEVTHGVDIYSGKDG 140
H L+E G D+ SG G
Sbjct: 642 EKHAAVVQLLVE--GGADLSSGDTG 664
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Highly selective inward-rectifying potassium channel that mediates potassium uptake by plant roots. Oryza sativa subsp. indica (taxid: 39946) |
| >sp|Q0JKV1|AKT1_ORYSJ Potassium channel AKT1 OS=Oryza sativa subsp. japonica GN=AKT1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 56 LASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAAL 115
L +DP DN GHTA ++A+KGN + ++LL++Y D N R EG +P+ +A
Sbjct: 586 LKRGMDPN---ESDNDGHTALHIAASKGNEQCVRLLLEYGAD-PNARDSEGKVPLWEALC 641
Query: 116 YGHKDTFHYLLEVTHGVDIYSGKDG 140
H L+E G D+ SG G
Sbjct: 642 EKHAAVVQLLVE--GGADLSSGDTG 664
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Highly selective inward-rectifying potassium channel that mediates potassium uptake by plant roots. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization. May be a major salt-sensitive potassium channel in roots. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q38998|AKT1_ARATH Potassium channel AKT1 OS=Arabidopsis thaliana GN=AKT1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 38 VELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPD 97
+ L A ++ + L L +DP DN+G T ++A+KG L + LL++Y+ D
Sbjct: 520 LNLCFAAIREDDLLLHQLLKRGLDPN---ESDNNGRTPLHIAASKGTLNCVLLLLEYHAD 576
Query: 98 LTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDG 140
N R EG +P+ +A + GH+ LLE HG I +G G
Sbjct: 577 -PNCRDAEGSVPLWEAMVEGHEKVVKVLLE--HGSTIDAGDVG 616
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Highly selective inward-rectifying potassium channel that mediate potassium uptake by plant roots in response to low K(+) conditions, by a calcium-, CBL-, and CIPK-dependent pathway. Involved in the stomatal regulation by monitoring the turgor pressure in guard cells. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization. May interact with the cytoskeleton or with regulatory proteins. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q71S21|INVSB_XENLA Inversin-B OS=Xenopus laevis GN=invs-b PE=1 SV=1 | Back alignment and function description |
|---|
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFL--PVHDAALYGHKDTFHYL 125
QD G T L+ GN ++LL Y N+ + P+H AAL GH H L
Sbjct: 213 QDYEGRTPLHLAVGDGNQEVVRLLTSYRG--CNVAPYDNLFRTPLHWAALLGHTPIAHLL 270
Query: 126 LEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSID 172
LE + +I S GA L + N D LL HP++ RD D
Sbjct: 271 LERNNSPNIPSDSQGATPLHYAAQGNCPDTVRVLLS-HPSV-RDEAD 315
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Required for normal renal development and establishment of left-right axis. Probably acts as a molecular switch between different Wnt signaling pathways. Inhibits the canonical Wnt pathway by targeting cytoplasmic disheveled for degradation by the ubiquitin-proteasome. This suggests that it is required in renal development to oppose the repression of terminal differentiation of tubular epithelial cells by Wnt signaling. Plays a central role in convergent extension movements in gastrulating embryos, a processus regulated by Wnt signaling. Xenopus laevis (taxid: 8355) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 624 | ||||||
| 255544802 | 590 | ankyrin repeat-containing protein, putat | 0.900 | 0.952 | 0.418 | 1e-117 | |
| 296087932 | 655 | unnamed protein product [Vitis vinifera] | 0.918 | 0.874 | 0.399 | 1e-108 | |
| 147784800 | 1697 | hypothetical protein VITISV_029434 [Viti | 0.900 | 0.331 | 0.405 | 1e-106 | |
| 255552378 | 580 | ankyrin repeat-containing protein, putat | 0.895 | 0.963 | 0.391 | 1e-106 | |
| 225449665 | 810 | PREDICTED: uncharacterized protein LOC10 | 0.892 | 0.687 | 0.396 | 1e-106 | |
| 296087936 | 750 | unnamed protein product [Vitis vinifera] | 0.894 | 0.744 | 0.384 | 1e-104 | |
| 296088578 | 718 | unnamed protein product [Vitis vinifera] | 0.908 | 0.789 | 0.390 | 1e-104 | |
| 359472754 | 789 | PREDICTED: ankyrin repeat-containing pro | 0.846 | 0.669 | 0.400 | 1e-104 | |
| 359477037 | 766 | PREDICTED: uncharacterized protein LOC10 | 0.889 | 0.724 | 0.387 | 1e-101 | |
| 147827121 | 667 | hypothetical protein VITISV_044401 [Viti | 0.927 | 0.868 | 0.387 | 1e-100 |
| >gi|255544802|ref|XP_002513462.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223547370|gb|EEF48865.1| ankyrin repeat-containing protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/611 (41%), Positives = 358/611 (58%), Gaps = 49/611 (8%)
Query: 5 NDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPET 64
W + P ALTAKI + F I L + + +I + + + + +
Sbjct: 19 GQWITAKRIFDEDPSALTAKI------SGFEEIA-LYVAITAGHSIEFVQNIVNLMSEDL 71
Query: 65 LARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHY 124
+ + G+ A +A GNL A K+LVK NP LT R+ P+H AA Y H++T +
Sbjct: 72 IGTVNRDGNNALHAAAMVGNLEAAKILVKKNPTLTQGRNVLNATPLHYAASYAHQETVRF 131
Query: 125 LLEVTHG--VDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLA 182
LL VT ++ KDG +L+ LI A+ Y +AL LLKR+P + R + L+ LA
Sbjct: 132 LLPVTRDEYPSPFTDKDGVRLLNSLITADFYGLALHLLKRYPALARGTDQYGFTSLDMLA 191
Query: 183 QKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKEST 242
+KP AF SGSRLG +Y+ S+ T +H GD+E+ + S+ + ++
Sbjct: 192 RKPQAFPSGSRLGFRHSFLYHYCAAN-----SVDTETFHQ-GGDVENQVGGSEKYCQK-- 243
Query: 243 RFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVR-IICEGVV 301
RF + I T L H + VE++R +I E +
Sbjct: 244 RFSFLRDIDKTL-----------------------------LMHKQAVELLRNLISEALK 274
Query: 302 WTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVF 361
Q + L + A GI E V E I +Y S + + DG TIF A+ +R+EK+F
Sbjct: 275 ANESQLHSLLGSSTQTATKFGIQEFVAEAIKSYPYSVWFRDGDGCTIFHLAIKHRQEKIF 334
Query: 362 NLIQGV-NFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVHP 420
NL+ + N + S D GN +LHLAG L PSS+++GAALQMQRELQWFK +E ++ P
Sbjct: 335 NLLYQIGNHKHIITSLADSLGNTMLHLAGTLQPSSKISGAALQMQRELQWFKEVEKVIQP 394
Query: 421 FFREATNDLKQTPREVFTEEHKELVKEGEKWLKETASSCSVVAALIITVVFAAVFTAPGG 480
++E + +TPR+VFTE HK LV++GEKW+K+TA+SC+ VAAL+ITVVFAA FT PGG
Sbjct: 395 SYKELKDKNGRTPRQVFTEGHKSLVEQGEKWMKDTATSCATVAALVITVVFAAAFTVPGG 454
Query: 481 SDG-RGMPNFLHDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEEDFLVSLPKKLII 539
++ +G+P +L++ +F+IFAISD L LFSS TS+LMFLGILTSRY+E DFL +LP +L I
Sbjct: 455 NNSDQGIPIYLNETAFVIFAISDALGLFSSSTSLLMFLGILTSRYSEGDFLKALPMRLSI 514
Query: 540 GLITLFFSIASMMVAFGATVHISLSHKWNSVIIPIALVGCVPITLFALLQFPLLLDMYSS 599
GLITLFFSIASM+ AF A H+ L H+ + +PI LV C P+TLFALLQFPLL +M SS
Sbjct: 515 GLITLFFSIASMLAAFSAAFHLVLFHRVKWIAVPIGLVACAPVTLFALLQFPLLSEMISS 574
Query: 600 TYGRSIIIESS 610
T+GRS+ + S
Sbjct: 575 TFGRSVFRKHS 585
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296087932|emb|CBI35215.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 246/616 (39%), Positives = 361/616 (58%), Gaps = 43/616 (6%)
Query: 2 IEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVD 61
++ +W +ED + ++PD + AKI P +T H+ A + +++KL K+
Sbjct: 62 LDGGNWNAIEDSLRSNPDLVRAKIT-PTGLTPLHI-------AALAGHVRVVEKLVDKLK 113
Query: 62 PETLA-RQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKD 120
PE L ++D G+T L+A+ G + ++ N L I G+ LPV A G K+
Sbjct: 114 PEDLGQKEDLLGYTPLALAASDGITEIAQCMLTKNRTLAGISDGDEMLPVVIACNRGKKE 173
Query: 121 TFHYLLEVTHGVDIY--SGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRII- 177
+L T + GK+GA++LS IA+ + DVALD+LK+HP + S+D RII
Sbjct: 174 MTRFLYSHTPQEKLAPGQGKNGASLLSNCIASQILDVALDILKKHPRLAI-SLDMERIIP 232
Query: 178 LNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIH 237
+ L Q P F SGS+L QR IY+CIPV+ + H D I+ + H
Sbjct: 233 IFVLGQMPSLFKSGSQLWFWQRWIYSCIPVKVD----------HASD-QIQVNVADDTQH 281
Query: 238 SKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIIC 297
S++ + + + + +G + + L + GIK I+ +KL H + E+++ IC
Sbjct: 282 SRD-VKNNTAKVLRHLYGPVSYLLQLL----------GIKNIYAKKLRHAQATELLQCIC 330
Query: 298 EGVVWTNFQNSAQLSV--AMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLY 355
+ N + + L + ++ A G + E I ++ + IF A+L
Sbjct: 331 NEIQKVNVEGTLGLRLHHTVIQAVKQGNVDFATEMIKYTPQLVQKTDINDRNIFFIAILN 390
Query: 356 RREKVFNLIQGVNFTTFL--FSSRDKAGNNILHLAGRLVPSSE---VAGAALQMQRELQW 410
R+EK+F+L+ G+N + S+ D+ GNN+LHLA L P+++ ++GAALQMQRELQW
Sbjct: 391 RQEKIFSLLHGLNNVKKMKMTSNVDRFGNNMLHLAAMLAPANQLDGISGAALQMQRELQW 450
Query: 411 FKAIENLVHPFFREATNDLKQTPREVFTEEHKELVKEGEKWLKETASSCSVVAALIITVV 470
FK +E++V P ++ N + P E+FTE+H LVKEGEKW+K+ A+S S VAALI+T++
Sbjct: 451 FKEVESIVPPICKDLVNADGKRPSELFTEQHANLVKEGEKWMKDIAASSSFVAALIVTIM 510
Query: 471 FAAVFTAPGGSDGRGMPNFLHDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEEDFL 530
FAA FT PGG+D G P FL + FM+F ISD ++LFS+ TSVLMFLGILTS+YAE FL
Sbjct: 511 FAAAFTIPGGNDDTGAPIFLGNDLFMVFIISDSISLFSATTSVLMFLGILTSQYAENKFL 570
Query: 531 VSLPKKLIIGLITLFFSIASMMVAFGATVHISLSHKWNS-VIIPIALVGCVPITLFALLQ 589
LP KLIIGL TLFFSIA+MM+AF A + I L + VIIPI L+ CVP+TLF LLQ
Sbjct: 571 TRLPTKLIIGLSTLFFSIATMMIAFCAALAILLKGRSTKVVIIPIILLACVPVTLFVLLQ 630
Query: 590 FPLLLDMYSSTYGRSI 605
FPLL++++ STYG I
Sbjct: 631 FPLLVEIFISTYGPGI 646
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147784800|emb|CAN68568.1| hypothetical protein VITISV_029434 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 248/611 (40%), Positives = 348/611 (56%), Gaps = 49/611 (8%)
Query: 6 DWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETL 65
DW+ + F+ ++P A+ A+I S T H+ A +++L + P+ L
Sbjct: 186 DWKSAKAFLESNPQAVRARITR-RSETALHI-------AAGARHTRFVEELVKLMKPDDL 237
Query: 66 ARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYL 125
A Q+ G+TA +AA G R +++V N +L IR +G P++ AAL GHKD YL
Sbjct: 238 ALQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVTPLYMAALVGHKDMVRYL 297
Query: 126 LEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185
VT D + +D +L I ANL+DVAL +L P + + L+ LA+KP
Sbjct: 298 YSVTE-EDNLTKEDRIGLLVAAITANLFDVALHMLHEDPELAMARDGNGDTALHVLARKP 356
Query: 186 YAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFG 245
AF SG R L+Y+ E L ++ I S S T
Sbjct: 357 LAFYSGRARQRGVFLLYSATKGEVRLCLNV-----------IRSLCSAS-------THVF 398
Query: 246 STQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNF 305
T FG + H + PG K ++D+KL H++ +E+V+ + + ++ +
Sbjct: 399 YXFNSQTYFGLLPHAV------------PGFKSVYDKKLMHIQALELVQQLWDKILSLDH 446
Query: 306 QNS-AQL----SVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKV 360
+L S + AA LGI E + I +Y N TIF AV +R+EK+
Sbjct: 447 DPKIGELIRTPSRLLFTAAELGIVEFITVLIRSYPDLIWKVNDQSQTIFHVAVAHRQEKI 506
Query: 361 FNLIQGVN-FTTFLFSSRDKAGNNILHLAGRLVPSSEV---AGAALQMQRELQWFKAIEN 416
FNLI + ++ + +D+ NN+LHLAG+L PS+ + +GAA Q+QREL WFK +E
Sbjct: 507 FNLIYEIGAHKDYIAAYKDEKNNNMLHLAGKLAPSNRLKIDSGAAFQLQRELHWFKEVEK 566
Query: 417 LVHPFFREATNDLKQTPREVFTEEHKELVKEGEKWLKETASSCSVVAALIITVVFAAVFT 476
++ P + E N+ +TP+ +FTEEHK+LV+EGEKW+K+TASSC VVA LI TV+FAA F+
Sbjct: 567 IIQPSYTEMKNEQGRTPQILFTEEHKDLVREGEKWMKDTASSCMVVATLIATVMFAAAFS 626
Query: 477 APGGSDG-RGMPNFLHDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEEDFLVSLPK 535
PGG+D G P FL +SF++FAISD LALFSS TS+L+FL ILTSRYAEEDFL SLP
Sbjct: 627 VPGGNDDDTGRPIFLTKKSFLVFAISDALALFSSATSILIFLSILTSRYAEEDFLESLPN 686
Query: 536 KLIIGLITLFFSIASMMVAFGATVHISLSHKWNSVIIPIALVGCVPITLFALLQFPLLLD 595
+LIIGL TLF S+A+MM+AF AT+ I L + V P+ALV CVP+TLF LL+FPL +D
Sbjct: 687 RLIIGLATLFISVATMMIAFCATLFIVLGPELVWVANPMALVACVPVTLFPLLKFPLFID 746
Query: 596 MYSSTYGRSII 606
M S Y SII
Sbjct: 747 MISHRYRSSII 757
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255552378|ref|XP_002517233.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223543604|gb|EEF45133.1| ankyrin repeat-containing protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 243/621 (39%), Positives = 355/621 (57%), Gaps = 62/621 (9%)
Query: 2 IEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVD 61
++ DW+ + F+ +HPDALTA + G T H+ V L E ++++L + +D
Sbjct: 10 VDSGDWEAAKKFLEDHPDALTASLSADGD-TALHVAV-LAGHVE------IVEELLTLLD 61
Query: 62 PETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDT 121
E L ++ + TA +A G R + LV +L +I + G +PV A+LYGHKD
Sbjct: 62 AEDLEMKNKNNATALNYAAIGGITRIAEGLVNSRKNLLSIPNQNGLIPVVVASLYGHKDM 121
Query: 122 FHYLLEVTHGVDIY--SGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILN 179
YL + + ++ GK+G +L+ I +LYD+ALDLL+ +P + + L
Sbjct: 122 ARYLYKESPKGELSPEKGKNGIMLLTTCIVDDLYDIALDLLQNYPELAYHQDSDKDTALE 181
Query: 180 TLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSK 239
LAQKP AF SGS L Q + VP Q + +GDIES
Sbjct: 182 MLAQKPSAFPSGSTLPLWQSI----------RVPESQPSS----NGDIES---------- 217
Query: 240 ESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEG 299
R G + PG++ +++ KLTH++ E++ +C+
Sbjct: 218 --PRSGRLIRRNIIRRV-----------------PGLEYLYNLKLTHVQAHELLCCLCQE 258
Query: 300 VVW---TNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYR 356
+ + F+N + A+ A G E V E Y ++ IF +AVL R
Sbjct: 259 ISTLHKSEFENIG-VYRAIFKAVKHGTVEFVEEMTKHYPDIIWCEDECNRGIFMYAVLQR 317
Query: 357 REKVFNLIQGVNFT-TFLFSSRDKAGNNILHLAGRLVPSSE---VAGAALQMQRELQWFK 412
+EKVFNLI + + +S DK NNILH A PSS+ V+GAALQMQRELQW+K
Sbjct: 318 QEKVFNLIYKMGAKKNSIATSWDKYFNNILHQAASPPPSSQLDRVSGAALQMQRELQWYK 377
Query: 413 AIENLVHPFFREATNDLKQTPREVFTEEHKELVKEGEKWLKETASSCSVVAALIITVVFA 472
+E++V P ++E N ++TPR +FTE HK+LV+EGEKW+K+TA+S +VVAALI T++F+
Sbjct: 378 EVESIVQPKYKEMVNFQRKTPRALFTESHKKLVEEGEKWMKDTATSSTVVAALIATIMFS 437
Query: 473 AVFTAPGGSDGRGMPNFLHDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEEDFLVS 532
A+FT PGG D G P +L++ FM+F ++D ++LF+S +S+LMFLGILT+RY EEDFL S
Sbjct: 438 AIFTVPGGYDQYGKPLYLYEGVFMVFMVADAMSLFASTSSILMFLGILTARYREEDFLKS 497
Query: 533 LPKKLIIGLITLFFSIASMMVAFGATVHISLSHKWNSVIIPIALVGCVPITLFALLQFPL 592
LP KLI+GL TLFFSIA+MM+ FG + L + + V+ PI L+ +P+TLFALLQFPL
Sbjct: 498 LPTKLIVGLSTLFFSIATMMITFGVALFTFLRERVSWVLFPIILLASLPVTLFALLQFPL 557
Query: 593 LLDMYSSTYGRSIIIES-SWR 612
L++++ STYG I +S WR
Sbjct: 558 LVEIFFSTYGLGIFEKSRKWR 578
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449665|ref|XP_002263931.1| PREDICTED: uncharacterized protein LOC100245348 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 244/616 (39%), Positives = 353/616 (57%), Gaps = 59/616 (9%)
Query: 2 IEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVD 61
++ +W +ED + ++PD + AKI P +T H+ A + +++KL K+
Sbjct: 233 LDGGNWNAIEDSLRSNPDLVRAKIT-PTGLTPLHI-------AALAGHVRVVEKLVDKLK 284
Query: 62 PETLA-RQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKD 120
PE L ++D G+T L+A+ G + ++ N L I G+ LPV A G K+
Sbjct: 285 PEDLGQKEDLLGYTPLALAASDGITEIAQCMLTKNRTLAGISDGDEMLPVVIACNRGKKE 344
Query: 121 TFHYLLEVTHGVDIY--SGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRII- 177
+L T + GK+GA++LS IA+ + DVALD+LK+HP + S+D RII
Sbjct: 345 MTRFLYSHTPQEKLAPGQGKNGASLLSNCIASQILDVALDILKKHPRLAI-SLDMERIIP 403
Query: 178 LNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIH 237
+ L Q P F SGS+L QR IY+CIPV+ + H D I+ + H
Sbjct: 404 IFVLGQMPSLFKSGSQLWFWQRWIYSCIPVKVD----------HASD-QIQVNVADDTQH 452
Query: 238 SKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIIC 297
S++ + + GIK I+ +KL H + E+++ IC
Sbjct: 453 SRDVKN---------------------------NTAKGIKNIYAKKLRHAQATELLQCIC 485
Query: 298 EGVVWTNFQNSAQLSV--AMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLY 355
+ N + + L + ++ A G + E I ++ + IF A+L
Sbjct: 486 NEIQKVNVEGTLGLRLHHTVIQAVKQGNVDFATEMIKYTPQLVQKTDINDRNIFFIAILN 545
Query: 356 RREKVFNLIQGVNFTTFL--FSSRDKAGNNILHLAGRLVPSSE---VAGAALQMQRELQW 410
R+EK+F+L+ G+N + S+ D+ GNN+LHLA L P+++ ++GAALQMQRELQW
Sbjct: 546 RQEKIFSLLHGLNNVKKMKMTSNVDRFGNNMLHLAAMLAPANQLDGISGAALQMQRELQW 605
Query: 411 FKAIENLVHPFFREATNDLKQTPREVFTEEHKELVKEGEKWLKETASSCSVVAALIITVV 470
FK +E++V P ++ N + P E+FTE+H LVKEGEKW+K+ A+S S VAALI+T++
Sbjct: 606 FKEVESIVPPICKDLVNADGKRPSELFTEQHANLVKEGEKWMKDIAASSSFVAALIVTIM 665
Query: 471 FAAVFTAPGGSDGRGMPNFLHDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEEDFL 530
FAA FT PGG+D G P FL + FM+F ISD ++LFS+ TSVLMFLGILTS+YAE FL
Sbjct: 666 FAAAFTIPGGNDDTGAPIFLGNDLFMVFIISDSISLFSATTSVLMFLGILTSQYAENKFL 725
Query: 531 VSLPKKLIIGLITLFFSIASMMVAFGATVHISLSHKWNS-VIIPIALVGCVPITLFALLQ 589
LP KLIIGL TLFFSIA+MM+AF A + I L + VIIPI L+ CVP+TLF LLQ
Sbjct: 726 TRLPTKLIIGLSTLFFSIATMMIAFCAALAILLKGRSTKVVIIPIILLACVPVTLFVLLQ 785
Query: 590 FPLLLDMYSSTYGRSI 605
FPLL++++ STYG I
Sbjct: 786 FPLLVEIFISTYGPGI 801
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296087936|emb|CBI35219.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 241/626 (38%), Positives = 342/626 (54%), Gaps = 68/626 (10%)
Query: 2 IEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVD 61
+ + W +E F +P ++AKI P T H+ V + ++++L K+
Sbjct: 162 LNRGRWNDIESFFNKNPGTVSAKI-SPKGETALHIAVRA-------GHVKVVEELVKKLS 213
Query: 62 PETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDT 121
P+ L +++N G T L+A G + ++K N +LT+I EG LPV A G K+
Sbjct: 214 PKDLKQENNEGRTPLALAALNGFKEIAQCMIKKNTELTSILDKEGILPVVRACNRGKKEV 273
Query: 122 ----FHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHP----TIGRDSIDS 173
++Y G GK+GA +L + IA D+AL +L++HP T +D +
Sbjct: 274 TRLLYNYTPPKEQGPKKGEGKNGATLLVYCIATKFLDIALHILEKHPSLAVTFNKDGVSP 333
Query: 174 RRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPS-IQTNDYHDLDGDIESFIV 232
L L QKP F SGS+L QR IY+CI V + IQ N D +
Sbjct: 334 ----LYVLGQKPSLFKSGSQLWFWQRWIYSCISVNVDCASDWIQINVVDD---------I 380
Query: 233 TSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEI 292
+ +T+ G + F + + IHDQKL H + ++I
Sbjct: 381 AQGRDDRNNTKKGMSLLQIDNFKVVFN-------------------IHDQKLRHAQAIKI 421
Query: 293 VRIICEGVVWTNFQNSA------QLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQ-DG 345
+ IC QN Q+ A+ A G E V E I + + WS+ +G
Sbjct: 422 LGSIC-----IELQNMKVDVLGFQVHQAVFQAVKRGNVEFVTEMIKSIPELA-WSHDING 475
Query: 346 HTIFDHAVLYRREKVFNLIQGVNFTTFL--FSSRDKAGNNILHLAGRLVPSSE---VAGA 400
IF A+L R+EK+FNL+ G+ + S D+ NN+LHL L PS + ++GA
Sbjct: 476 RNIFFIAILNRQEKIFNLLHGLTHAQKMKVISPLDRFRNNMLHLVAMLAPSEQLDGISGA 535
Query: 401 ALQMQRELQWFKAIENLVHPFFREATNDLKQTPREVFTEEHKELVKEGEKWLKETASSCS 460
ALQMQRELQWFK +E++V P F++ TN + EVF+++H +LVKEGEKW+KE A+S +
Sbjct: 536 ALQMQRELQWFKEVESIVPPLFKDLTNSDGKKASEVFSQQHADLVKEGEKWMKEIATSST 595
Query: 461 VVAALIITVVFAAVFTAPGGSDGRGMPNFLHDQSFMIFAISDMLALFSSITSVLMFLGIL 520
VAALI+T++FAA FT P G++ +G P FL D F++F ISD ++LFS+ TSVLMFLGIL
Sbjct: 596 FVAALIVTIMFAAAFTIPAGNNDKGAPIFLDDTFFIVFIISDSISLFSATTSVLMFLGIL 655
Query: 521 TSRYAEEDFLVSLPKKLIIGLITLFFSIASMMVAFGATVHISLSHKWNSVI-IPIALVGC 579
TS YAE FL LP KLIIGL LF SIA+MM+AF A + + L V+ IPI L+ C
Sbjct: 656 TSVYAENKFLTRLPTKLIIGLSALFISIAAMMIAFCAALAVLLKESSTKVVMIPIILLAC 715
Query: 580 VPITLFALLQFPLLLDMYSSTYGRSI 605
VP+TLFALLQFPLL++++ STYG I
Sbjct: 716 VPVTLFALLQFPLLVNIFISTYGPGI 741
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296088578|emb|CBI37569.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 246/630 (39%), Positives = 354/630 (56%), Gaps = 63/630 (10%)
Query: 2 IEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVD 61
++ DW + F+ + PDA+ A I P + T H+ + L A ++ +L +
Sbjct: 131 VDDGDWVTTKAFLDHDPDAVRASI-SPTNETALHVAI-LAGHAH------IVKELVKLMT 182
Query: 62 PETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDT 121
P+ L + G TA T +A G + K +V+ P + + G +PV A+ Y KD
Sbjct: 183 PKDLELRSGLGETALTTAAISGVTKMAKAIVEQYPSAVCVGNEHGQIPVIVASFYDQKDM 242
Query: 122 FHYLLEVT--HGVDIYSGKDGANVLSFLIAANLYDVALDLLK--RHPTIGRDSIDSRRII 177
YL VT + G +GA +L+FL++AN+YD+AL LLK RH + +D + +
Sbjct: 243 VRYLYSVTPIEELSPEKGTNGATLLNFLVSANIYDIALHLLKHYRHLSFTKDYYGNYTV- 301
Query: 178 LNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIH 237
LA+KP AF SGS+L +R IY+C + FIV +
Sbjct: 302 -RMLARKPSAFLSGSKLLFWERWIYSC-----------------------KYFIVNHHLL 337
Query: 238 SKE-----STRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEI 292
K + T+G K + + P +K I++ K TH+ + ++
Sbjct: 338 EKVYLHYLANHLTCPSNYMDTYGPPKSK--------QVLVFPDLKHIYEAKWTHVGSSQL 389
Query: 293 VRIICEGVVWTNFQNSAQLSVAMLAAAIL-GIPEVVNEFIMA---YDSSSNWSNQ-DGHT 347
+ I E + + S+QL + + AI I + EFI+A +D S W G T
Sbjct: 390 LDCIFEEI---PYLTSSQLEMFGINQAIYDAIKHGIIEFIVALIKHDPESIWRKGVKGRT 446
Query: 348 IFDHAVLYRREKVFNLIQGVNFTTFLFSSR-DKAGNNILHLAGRLVPSSE---VAGAALQ 403
+F HAV+ R+EK+F+L+ G+ + + R D NNILHLAG+L P S+ V+GAALQ
Sbjct: 447 MFSHAVVLRQEKIFSLVYGLGIKKNVIARRHDIFHNNILHLAGKLSPPSQLDRVSGAALQ 506
Query: 404 MQRELQWFKAIENLVHPFFREATNDLKQTPREVFTEEHKELVKEGEKWLKETASSCSVVA 463
MQRELQWFK +E++V ++E N+ +TP VF EEH ELVK+GE W+K TA+SC VVA
Sbjct: 507 MQRELQWFKEVESMVQAKYKEEFNEYHKTPIHVFIEEHAELVKQGESWMKSTAASCMVVA 566
Query: 464 ALIITVVFAAVFTAPGGS-DGRGMPNFLHDQSFMIFAISDMLALFSSITSVLMFLGILTS 522
LI ++F FT PGG+ + G+P F+ ++FM+F SD L+LFSS TSVLMFLGILTS
Sbjct: 567 TLIAALMFTTAFTLPGGTKNDTGIPVFIKSKAFMVFIASDALSLFSSSTSVLMFLGILTS 626
Query: 523 RYAEEDFLVSLPKKLIIGLITLFFSIASMMVAFGATVHISLSHKWNSVIIPIALVGCVPI 582
RYA EDFL SLP KLIIGL +LFFSI SMMVAFG+ + + L + + + PI + C+PI
Sbjct: 627 RYAAEDFLKSLPIKLIIGLSSLFFSIVSMMVAFGSAIFVVLCQELSWISFPIIALACIPI 686
Query: 583 TLFALLQFPLLLDMYSSTYGRSIIIESSWR 612
T FALLQFPLL+++ + TYGRSI + + R
Sbjct: 687 TFFALLQFPLLVEIVTCTYGRSIFDKPTKR 716
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359472754|ref|XP_002276402.2| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 243/606 (40%), Positives = 335/606 (55%), Gaps = 78/606 (12%)
Query: 6 DWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETL 65
DW+ + F+ ++P A+ A+I S T H+ A +++L + P+ L
Sbjct: 186 DWKSAKAFLESNPQAVRARITR-RSETALHI-------AAGARHTRFVEELVKLMKPDDL 237
Query: 66 ARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYL 125
A Q+ G+TA +AA G R +++V N +L IR +G P++ AAL GHKD YL
Sbjct: 238 ALQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVTPLYMAALVGHKDMVRYL 297
Query: 126 LEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185
VT D + +D +L I ANL+DVAL +L P + + L+ LA+KP
Sbjct: 298 YSVTEE-DNLTKEDRIGLLVAAITANLFDVALHMLHEDPELAMARDGNGDTALHVLARKP 356
Query: 186 YAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFG 245
AF SGS+LG R IY SF ++ K+
Sbjct: 357 LAFYSGSQLGIWHRCIY--------------------------SFPGFKSVYDKKLMHIQ 390
Query: 246 STQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNF 305
+ + L + LW+ + L HD K+ E++R
Sbjct: 391 ALE------------LVQQLWDKILSLD------HDPKIG-----ELIRTP--------- 418
Query: 306 QNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQ 365
S + AA LGI E + I +Y N TIF AV +R+EK+FNLI
Sbjct: 419 ------SRLLFTAAELGIVEFITVLIRSYPDLIWKVNDQSQTIFHVAVAHRQEKIFNLIY 472
Query: 366 GVN-FTTFLFSSRDKAGNNILHLAGRLVPSSEV---AGAALQMQRELQWFKAIENLVHPF 421
+ ++ + +D+ NN+LHLAG+L PS+ + +GAA Q+QREL WFK +E ++ P
Sbjct: 473 EIGAHKDYIAAYKDEKNNNMLHLAGKLAPSNRLKIDSGAAFQLQRELHWFKEVEKIIQPS 532
Query: 422 FREATNDLKQTPREVFTEEHKELVKEGEKWLKETASSCSVVAALIITVVFAAVFTAPGGS 481
+ E N+ +TP+ +FTEEHK+LV+EGEKW+K+TASSC VVA LI TV+FAA F+ PGG+
Sbjct: 533 YTEMKNEQGRTPQILFTEEHKDLVREGEKWMKDTASSCMVVATLIATVMFAAAFSVPGGN 592
Query: 482 -DGRGMPNFLHDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEEDFLVSLPKKLIIG 540
D G P FL +SF++FAISD LALFSS TS+L+FL ILTSRYAEEDFL SLP +LIIG
Sbjct: 593 DDDTGRPIFLTKKSFLVFAISDALALFSSATSILIFLSILTSRYAEEDFLESLPNRLIIG 652
Query: 541 LITLFFSIASMMVAFGATVHISLSHKWNSVIIPIALVGCVPITLFALLQFPLLLDMYSST 600
L TLF S+A+MM+AF AT+ I L + V P+ALV CVP+TLF LL+FPL +DM S
Sbjct: 653 LATLFISVATMMIAFCATLFIVLGPELVWVANPMALVACVPVTLFPLLKFPLFIDMISHR 712
Query: 601 YGRSII 606
Y SII
Sbjct: 713 YRSSII 718
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477037|ref|XP_002275355.2| PREDICTED: uncharacterized protein LOC100250623 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 242/625 (38%), Positives = 347/625 (55%), Gaps = 70/625 (11%)
Query: 2 IEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVD 61
++ DW + F+ + PDA+ A I P + T H+ + L A ++ +L +
Sbjct: 196 VDDGDWVTTKAFLDHDPDAVRASI-SPTNETALHVAI-LAGHAH------IVKELVKLMT 247
Query: 62 PETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDT 121
P+ L + G TA T +A G + K +V+ P + + G +PV A+ Y KD
Sbjct: 248 PKDLELRSGLGETALTTAAISGVTKMAKAIVEQYPSAVCVGNEHGQIPVIVASFYDQKDM 307
Query: 122 FHYLLEVT--HGVDIYSGKDGANVLSFLIAANLYDVALDLLK--RHPTIGRDSIDSRRII 177
YL VT + G +GA +L+FL++AN+YD+AL LLK RH + +D + +
Sbjct: 308 VRYLYSVTPIEELSPEKGTNGATLLNFLVSANIYDIALHLLKHYRHLSFTKDYYGNYTV- 366
Query: 178 LNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIH 237
LA+KP AF SG+ E P D+H D I +H
Sbjct: 367 -RMLARKPSAFLSGT----------------DEENPENSQQDHHLGDHII--------VH 401
Query: 238 SKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIIC 297
R ++W + P +K I++ K TH+ + +++ I
Sbjct: 402 VPRRWR-------------------GLIWKLLLRFVPDLKHIYEAKWTHVGSSQLLDCIF 442
Query: 298 EGVVWTNFQNSAQLSVAMLAAAIL-GIPEVVNEFIMA---YDSSSNWSNQ-DGHTIFDHA 352
E + + S+QL + + AI I + EFI+A +D S W G T+F HA
Sbjct: 443 EEI---PYLTSSQLEMFGINQAIYDAIKHGIIEFIVALIKHDPESIWRKGVKGRTMFSHA 499
Query: 353 VLYRREKVFNLIQGVNFTTFLFSSR-DKAGNNILHLAGRLVPSSE---VAGAALQMQREL 408
V+ R+EK+F+L+ G+ + + R D NNILHLAG+L P S+ V+GAALQMQREL
Sbjct: 500 VVLRQEKIFSLVYGLGIKKNVIARRHDIFHNNILHLAGKLSPPSQLDRVSGAALQMQREL 559
Query: 409 QWFKAIENLVHPFFREATNDLKQTPREVFTEEHKELVKEGEKWLKETASSCSVVAALIIT 468
QWFK +E++V ++E N+ +TP VF EEH ELVK+GE W+K TA+SC VVA LI
Sbjct: 560 QWFKEVESMVQAKYKEEFNEYHKTPIHVFIEEHAELVKQGESWMKSTAASCMVVATLIAA 619
Query: 469 VVFAAVFTAPGGS-DGRGMPNFLHDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEE 527
++F FT PGG+ + G+P F+ ++FM+F SD L+LFSS TSVLMFLGILTSRYA E
Sbjct: 620 LMFTTAFTLPGGTKNDTGIPVFIKSKAFMVFIASDALSLFSSSTSVLMFLGILTSRYAAE 679
Query: 528 DFLVSLPKKLIIGLITLFFSIASMMVAFGATVHISLSHKWNSVIIPIALVGCVPITLFAL 587
DFL SLP KLIIGL +LFFSI SMMVAFG+ + + L + + + PI + C+PIT FAL
Sbjct: 680 DFLKSLPIKLIIGLSSLFFSIVSMMVAFGSAIFVVLCQELSWISFPIIALACIPITFFAL 739
Query: 588 LQFPLLLDMYSSTYGRSIIIESSWR 612
LQFPLL+++ + TYGRSI + + R
Sbjct: 740 LQFPLLVEIVTCTYGRSIFDKPTKR 764
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147827121|emb|CAN62183.1| hypothetical protein VITISV_044401 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 247/638 (38%), Positives = 355/638 (55%), Gaps = 59/638 (9%)
Query: 2 IEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVD 61
++ DW + F+ + PDA+ A I P + T H+ I A + L KL + D
Sbjct: 60 VDDGDWVTTKAFLDHDPDAVRASI-SPTNETALHVA----ILAGHAHIVKELVKLMTXKD 114
Query: 62 PETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDT 121
L + G TA T +A G + K +V+ P KD
Sbjct: 115 ---LELRSGLGETALTTAAISGVTKMAKAIVEQYPSA------------------DQKDM 153
Query: 122 FHYLLEVT--HGVDIYSGKDGANVLSFLIAANLYDVALDLLK--RHPTIGRDSIDSRRII 177
YL VT + G +GA +L+FL++AN+YD+AL LLK RH + +D + +
Sbjct: 154 VRYLYSVTPIEELSPEKGTNGATLLNFLVSANIYDIALHLLKHYRHLSFTKDYYGNYTV- 212
Query: 178 LNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDY---------HDLDGDI- 227
LA+KP AF SGS+L +R IY C+ + +L+ + + DG I
Sbjct: 213 -RMLARKPSAFLSGSKLLFWERWIY-CMLIIVQLIGKVMKQVWPLPFVIIYVRPFDGPIA 270
Query: 228 ESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHR---MLWNAXMHLSPGIKGIHDQKL 284
E ++ + E S Q ++H R ++W + P +K I++ K
Sbjct: 271 EDHEXLDQLPADEENPENSQQDHHLGDHIIVHVPRRWRGLIWKLLLRFVPDLKHIYEAKW 330
Query: 285 THMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAIL-GIPEVVNEFIMA---YDSSSNW 340
TH+ + +++ I E + + S+QL + + AI I + EFI+A +D S W
Sbjct: 331 THVGSSQLLDCIFEEI---PYLTSSQLEMFGINQAIYDAIKHGIIEFIVALIKHDPESIW 387
Query: 341 SNQ-DGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSR-DKAGNNILHLAGRLVPSSE-- 396
G T+F HAV+ R+EK+F+L+ G+ + + R D NNILHLAG+L P+S+
Sbjct: 388 RKGVKGRTMFSHAVVLRQEKIFSLVYGLGIKKNVIARRHDIFHNNILHLAGKLSPTSQLD 447
Query: 397 -VAGAALQMQRELQWFKAIENLVHPFFREATNDLKQTPREVFTEEHKELVKEGEKWLKET 455
V+GAALQMQRELQWFK +E++V ++E N+ +TP VF EEH ELVK+GE W+K T
Sbjct: 448 RVSGAALQMQRELQWFKEVESMVQAKYKEEFNEYHKTPIHVFIEEHAELVKQGESWMKST 507
Query: 456 ASSCSVVAALIITVVFAAVFTAPGGS-DGRGMPNFLHDQSFMIFAISDMLALFSSITSVL 514
A+SC VVA LI ++F FT PGG+ + G+P F+ ++FM+F SD L+LFSS TSVL
Sbjct: 508 AASCMVVATLIAALMFTTAFTLPGGTKNDTGIPVFIKSKAFMVFIASDALSLFSSSTSVL 567
Query: 515 MFLGILTSRYAEEDFLVSLPKKLIIGLITLFFSIASMMVAFGATVHISLSHKWNSVIIPI 574
MFLGILTSRYA EDFL SLP KLIIGL +LFFSI SMMVAFG+ + + L + + + PI
Sbjct: 568 MFLGILTSRYAAEDFLKSLPIKLIIGLSSLFFSIVSMMVAFGSAIFVVLCQELSWISFPI 627
Query: 575 ALVGCVPITLFALLQFPLLLDMYSSTYGRSIIIESSWR 612
+ C+PIT FALLQFPLL+++ + TYGRSI + + R
Sbjct: 628 IALACIPITFFALLQFPLLVEIVTCTYGRSIFDKPTKR 665
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 624 | ||||||
| TAIR|locus:2175413 | 669 | AT5G04700 "AT5G04700" [Arabido | 0.528 | 0.493 | 0.414 | 4.7e-74 | |
| TAIR|locus:2180228 | 625 | AT5G04690 "AT5G04690" [Arabido | 0.524 | 0.523 | 0.405 | 4.2e-71 | |
| TAIR|locus:2175448 | 603 | AT5G04730 "AT5G04730" [Arabido | 0.524 | 0.542 | 0.421 | 3.7e-68 | |
| TAIR|locus:2080240 | 574 | AT3G54070 "AT3G54070" [Arabido | 0.434 | 0.472 | 0.411 | 4.2e-59 | |
| TAIR|locus:2165174 | 347 | AT5G35810 "AT5G35810" [Arabido | 0.461 | 0.829 | 0.396 | 2.9e-48 | |
| TAIR|locus:2026489 | 543 | AT1G07710 "AT1G07710" [Arabido | 0.549 | 0.631 | 0.249 | 3.1e-13 | |
| TAIR|locus:2075009 | 607 | AT3G09550 [Arabidopsis thalian | 0.416 | 0.428 | 0.247 | 4.8e-13 | |
| TAIR|locus:2045233 | 662 | AT2G31820 [Arabidopsis thalian | 0.463 | 0.436 | 0.251 | 7.5e-12 | |
| TAIR|locus:2157553 | 598 | AT5G54710 "AT5G54710" [Arabido | 0.217 | 0.227 | 0.277 | 2.5e-11 | |
| TAIR|locus:2092522 | 590 | ITN1 "INCREASED TOLERANCE TO N | 0.243 | 0.257 | 0.298 | 3.5e-10 |
| TAIR|locus:2175413 AT5G04700 "AT5G04700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 629 (226.5 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 141/340 (41%), Positives = 208/340 (61%)
Query: 275 GIKGIHDQKLTHMRTVEIVRIICEGVVWTNF-QNSAQLSVAMLAAAILGIPEVVNEFIMA 333
GI ++ K+ H++ +++ I E + + S + A+L A G + + E I
Sbjct: 322 GIDEVYRLKVMHLQAKKLLLGISEETLALGLKERSETVDEALLFAVRYGNVDFLVEMIRN 381
Query: 334 YDSSSNWSNQ--DGHTIFDHAVLYRREKVFNLIQGVNFTTFLF-SSRDKAGNNILHLAGR 390
+S WS + T+F AV +R+EKVF+L+ G++ +L + +D GN +LHLAG
Sbjct: 382 -NSELLWSTRTSSSSTLFLLAVEFRQEKVFSLLYGLDDRKYLLLADKDCDGNGVLHLAGF 440
Query: 391 LVPSSE---VAGAALQMQRELQWFKAIENLVHPFFREATNDLKQTPREVFTEEHKELVKE 447
P S+ V GA LQ+QRELQWFK +E + +E N +QTP E+FT+EH+ L +E
Sbjct: 441 PSPPSKLSSVVGAPLQLQRELQWFKEVERIAPEIEKERVNTEEQTPIEIFTKEHQGLRQE 500
Query: 448 GEKWLKETASSCSVVAALIITVVFAAVFTAPGGSD--GRGMPNFLHDQSFMIFAISDMLA 505
EKW+K+TA SCS+VAALI+TV FAAVFT PGG+D +G P L D+ F+IF +SD+++
Sbjct: 501 AEKWMKDTAMSCSLVAALIVTVTFAAVFTVPGGTDDNSKGKPFHLRDRRFIIFIVSDLIS 560
Query: 506 LFSSITSVLMFLGILTSRYAEEDFLVSLPKKLIIGLITLFFSIASMMVAFGATVHISLSH 565
F+S TSVL+FLGILT+RY+ +DFLV LP K+I GL LF SIA+M++AF + + +
Sbjct: 561 CFASCTSVLIFLGILTARYSFDDFLVFLPTKMIAGLSILFVSIAAMLIAFSSALFTMMGK 620
Query: 566 KWNSVIIPIALVGCVPITXXXXXXXXXXXDMYSSTYGRSI 605
+ ++ P L C+P +M STYG+ I
Sbjct: 621 EGKWIVAPTILFACLPALLFVLLQYPLLKEMIFSTYGKGI 660
|
|
| TAIR|locus:2180228 AT5G04690 "AT5G04690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 610 (219.8 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 137/338 (40%), Positives = 202/338 (59%)
Query: 275 GIKGIHDQKLTHMRTVEIVRIICEGVVWTNF-QNSAQLSVAMLAAAILGIPEVVNEFIMA 333
GI ++ K+ H++ ++++ I E + + S + A+L A G + + E I
Sbjct: 283 GIDEVYRLKVMHLQAKKLLKGISEETLALGLKERSESVDEALLFAVRYGNVDFLVEMIKN 342
Query: 334 YDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLF-SSRDKAGNNILHLAGRLV 392
+S WS T+F+ AV R+EKVF+L+ G+ +LF + +D GN++LHLAG
Sbjct: 343 -NSELLWSTGTS-TLFNTAVQVRQEKVFSLLYGLGDRKYLFLADKDSDGNSVLHLAGYPP 400
Query: 393 PSSEVA---GAALQMQRELQWFKAIENLVHPFFREATNDLKQTPREVFTEEHKELVKEGE 449
P+ ++A A LQMQRELQWFK +E +V E N TP E+F +EH+ + E E
Sbjct: 401 PNYKLATVVSATLQMQRELQWFKEMERIVPAIENERVNTENLTPIEIFRKEHEAMRLEAE 460
Query: 450 KWLKETASSCSVVAALIITVVFAAVFTAPGGSDGR--GMPNFLHDQSFMIFAISDMLALF 507
KW+K+TA SCS+VAALI+TV FAA+FT PGG+D G P H++ F+IF +SD+++ F
Sbjct: 461 KWMKDTAMSCSLVAALIVTVTFAAIFTVPGGTDDNSGGRPFHRHERIFVIFIVSDLISCF 520
Query: 508 SSITSVLMFLGILTSRYAEEDFLVSLPKKLIIGLITLFFSIASMMVAFGATVHISLSHKW 567
++ TSVL+FLGILT+RYA +DFL SLP +I GL TLF SIA+M+VAF + + + W
Sbjct: 521 AACTSVLIFLGILTARYAFDDFLFSLPANMIAGLSTLFVSIAAMLVAFSSALFTIFNDPW 580
Query: 568 NSVIIPIALVGCVPITXXXXXXXXXXXDMYSSTYGRSI 605
++ P C P ++ STYG+ I
Sbjct: 581 --IVAPTIFFACFPALLFVMIQYPLLKELIFSTYGKRI 616
|
|
| TAIR|locus:2175448 AT5G04730 "AT5G04730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 602 (217.0 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 145/344 (42%), Positives = 205/344 (59%)
Query: 275 GIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQ----LSVAMLAAAILGIPEVVNEF 330
GIK +D K H + ++++ +C + +N + + A+L AA G + E
Sbjct: 254 GIKQTYDLKKRHSQAQKLLKQMCTSLRDIMAKNEIRWKETVYEALLEAAKSGNRDFFIEI 313
Query: 331 IMAYDSSSNW--SNQDGHTIFDHAVLYRREKVFNLIQGVNFTTF-LFSSRDKAGNNILHL 387
I +S W + G +F AV +++EK+FNLI G++ L S DK NNILH+
Sbjct: 314 IKC-NSQLLWILNPTSGRNLFQLAVEFKKEKIFNLIHGLDDRKVTLLRSYDKGNNNILHI 372
Query: 388 AGRL-VPS--SEVAGAALQMQRELQWFKAIENLVHPFFREATNDLK--QTPREVFTEEHK 442
AGRL P S+++GAAL+MQRE QWFK +E+LV RE K +TPR++F H+
Sbjct: 373 AGRLSTPDQLSKISGAALKMQRESQWFKEVESLVSE--REVVQKNKDNKTPRQIFEHYHE 430
Query: 443 ELVKEGEKWLKETASSCSVVAALIITVVFAAVFTAPGGSDGR-GMPNFLHDQSFMIFAIS 501
L KEGE+W+K TA++CS VAALI TV F A+FT PGG DG G P L+D F F +
Sbjct: 431 HLRKEGEEWMKYTATACSFVAALIATVTFQAIFTVPGGIDGTSGSPLILNDLHFRAFIFT 490
Query: 502 DMLALFSSITSVLMFLGILTSRYAEEDFLVSLPKKLIIGLITLFFSIASMMVAFGATVHI 561
D LA F+S SVL+FL ILTSRY+ +DF+VSLP+K+I+G LF SIASM+VAF ++
Sbjct: 491 DTLAFFASCISVLIFLSILTSRYSFDDFIVSLPRKMILGQSILFISIASMLVAFITSLSA 550
Query: 562 SLSHKWNSVIIPIALVGCVPITXXXXXXXXXXXDMYSSTYGRSI 605
S+ HK +++ P+ + P +M SSTYG+ +
Sbjct: 551 SMRHK-PALVYPLKPLASFPSLLFLMLQYPLLKEMISSTYGKRL 593
|
|
| TAIR|locus:2080240 AT3G54070 "AT3G54070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 480 (174.0 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 119/289 (41%), Positives = 171/289 (59%)
Query: 305 FQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWS-NQDGHTIFDHAVLYRREKVFNL 363
FQ A S + AA LG E++ I ++ W + + T+F A LYR E +F+L
Sbjct: 250 FQQVAS-SWLLFDAAELGNVEILVILIRSH-LDLLWIVDNNNRTLFHVAALYRHENIFSL 307
Query: 364 IQGVNFTTFLFSS-RDKAGNN-ILHLAGRLVPSS--EV-AGAALQMQRELQWFKAIENLV 418
I + L +S ++K + +LHL RL P + +V +GAAL MQ+EL WFKA++ +V
Sbjct: 308 IYELGGIKDLIASYKEKQSKDTLLHLVARLPPMNRQQVGSGAALHMQKELLWFKAVKEIV 367
Query: 419 HPFFREATNDLKQTPREVFTEEHKELVKEGEKWLKETASSCSVVAALIITVVFAAVFTAP 478
+ E N + ++FTE+H+ L KEGE+W+KETA++C + A LI TVVFAA T P
Sbjct: 368 PRSYIETKNTKGELAHDIFTEQHENLRKEGERWMKETATACMLGATLIATVVFAAAITIP 427
Query: 479 GGSDGRG-------MPNFLHDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEEDFLV 531
GG+D G PNF F IF +SD +ALFSS+ S+++FL I TSRYAEEDF
Sbjct: 428 GGNDDSGDKANTLGFPNFRKRLLFDIFTLSDSVALFSSMMSIVIFLSIFTSRYAEEDFRY 487
Query: 532 SLPKKLIIGLITLFFSIASMMVAFGATVHISLSHKWNSVIIPIALVGCV 580
LP KL+ GL LF SI SM++AF ++ + K + + + L+ C+
Sbjct: 488 DLPTKLMFGLSALFISIISMILAFTFSMILIRVEKAS---LSLVLISCL 533
|
|
| TAIR|locus:2165174 AT5G35810 "AT5G35810" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 120/303 (39%), Positives = 178/303 (58%)
Query: 284 LTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWS-N 342
L HM E+ + + V Q + + AA G E++ I +Y W+ +
Sbjct: 4 LAHMVVEELWSFVIKLPVEEISQFVGSSPMLLFDAAQSGNLELLLILIRSYPDLI-WTVD 62
Query: 343 QDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSS-RDKAGN-NILHLAGRLVPSSE---V 397
++F A + R EK+FN I + L + ++K N N+LHL RL P + V
Sbjct: 63 HKNQSLFHIAAINRHEKIFNRIYELGAIKDLIAMYKEKESNDNLLHLVARLPPPNRLQVV 122
Query: 398 AGAALQMQRELQWFKAIENLVHPFFREATNDLKQTPREVFTEEHKELVKEGEKWLKETAS 457
+GAALQMQRE+ W+KA++ +V + + N ++ ++FT+EH L KEGEKW+KETA+
Sbjct: 123 SGAALQMQREILWYKAVKEIVPRVYIKTKNKKEEVAHDLFTKEHDNLRKEGEKWMKETAT 182
Query: 458 SCSVVAALIITVVFAAVFTAPGGSDGRG------MPNFLHDQSFMIFAISDMLALFSSIT 511
+C +V+ LI TVVFAA FT PGG+D G P F + F +F ISD +AL SS+T
Sbjct: 183 ACILVSTLIATVVFAAAFTLPGGNDTSGDIKTLGFPTFRKEFWFEVFIISDSVALLSSVT 242
Query: 512 SVLMFLGILTSRYAEEDFLVSLPKKLIIGLITLFFSIASMMVAFGATVHISLSH--KWNS 569
S+++FL ILTSRYAE F +LP KL++GL+ LF SI SM++AF AT+ + KW+
Sbjct: 243 SIMIFLSILTSRYAEASFQTTLPTKLMLGLLALFVSIISMVLAFTATLILIRDQEPKWSL 302
Query: 570 VII 572
+++
Sbjct: 303 ILL 305
|
|
| TAIR|locus:2026489 AT1G07710 "AT1G07710" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 172 (65.6 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 98/393 (24%), Positives = 169/393 (43%)
Query: 225 GDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGI---HD 281
GD++ V ++ HS+ + + TT + H + N + L + GI +
Sbjct: 112 GDLDVLKVLAEAHSELAMTVDLSN--TTALHTAATQGHTEVVNFLLELGSSLAGIAKSNG 169
Query: 282 QKLTHMRT----VEIVRIIC--EGVVWTNFQNSAQLSVAMLAAAILGIP-EVVNEFIMAY 334
+ H + V++++ + E + Q ++ M A+ G EVV E I A
Sbjct: 170 KTALHSASRNGHVKVIKALLASEPAIAIRMDKKGQTALHM---AVKGTNVEVVEELIKAD 226
Query: 335 DSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSR---------DKAGNN-- 383
SS N ++ G+T A R ++ L+ N T +R +K GN
Sbjct: 227 RSSINIADTKGNTALHIAARKGRSQIVKLLLANNMTDTKAVNRSGETALDTAEKIGNPEV 286
Query: 384 ILHLAGRLVPSSE-VAGAALQMQRELQWFKAIENLVHPFFREATNDLKQT--PREVFTEE 440
L L VPS++ + + REL+ + + ++ H E N L+ T R+
Sbjct: 287 ALILQKHGVPSAKTIKPSGPNPARELK--QTVSDIKH----EVHNQLEHTRLTRKRVQGI 340
Query: 441 HKELVKEGEKWLKETASSCSVVAALIITVVFAAVFTAPGG--------SDGR--GMPNFL 490
K+L K + L +S +VVA LI TV FAA+FT PG DG G N
Sbjct: 341 AKQLNKMHTEGLNNAINSTTVVAVLIATVAFAAIFTVPGQYVEDTSKIPDGHSLGEANIA 400
Query: 491 HDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEEDFLVSLPKKLIIGLITLFFSIAS 550
F+IF I D +ALF S+ V++ ++ + ++++ KL+ L + S+A
Sbjct: 401 STTPFIIFFIFDSIALFISLAVVVVQTSVVVIESKAKKQMMAVINKLM-WLACVLISVAF 459
Query: 551 MMVAFGATVHISLSHKWNSVIIPIALVGCVPIT 583
+ ++F V + KW ++ + A+ + IT
Sbjct: 460 LALSF---VVVGEEEKWLAIWVT-AIGATIMIT 488
|
|
| TAIR|locus:2075009 AT3G09550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 166 (63.5 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 69/279 (24%), Positives = 122/279 (43%)
Query: 316 LAAAILGIP-EVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLF 374
L A+ G+ +VV + A + ++ G+T+ A +R ++ N + + T
Sbjct: 284 LHMAVKGVSSQVVRLLLRADPAIVMLPDKFGNTVLHIATRKKRAEIVNELLQLPDTNVNA 343
Query: 375 SSRDKAGNNILHLAGRLVPSSEVAG--------AALQMQRELQWFKAIENLVHPFFREAT 426
+RD +A L S E A AL+ Q + V ++
Sbjct: 344 LTRDH--KTAYDIAEGLTHSEETAEIKEILSRCGALKANELNQPRDELRKTVTEIKKDVH 401
Query: 427 NDLKQTPREVFTEEH--KELVKEGEKWLKETASSCSVVAALIITVVFAAVFTAPGGSDGR 484
L+QT + + KEL K + +S +VVA L TV FAA+FT PGG D
Sbjct: 402 TQLEQTRKTNKNVDGIAKELRKLHRAGINNATNSVTVVAVLFATVAFAAIFTVPGGDDDH 461
Query: 485 GMPNFLHDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEEDFLVSLPKKLIIGLITL 544
G+ +H SF IF I + +ALF+S+ V++ + ++ E +V + KL +
Sbjct: 462 GVAVMVHATSFKIFFIFNAIALFTSLAVVVVQITLVRGETKTERRVVEVINKL------M 515
Query: 545 FFSIASMMVAFGATVHISLSHKWNSVIIPIALVGCVPIT 583
+ + VAF ++ +I + + + + ++G V +T
Sbjct: 516 WLASVCTTVAFISSSYIVVGRRNRYAAVVVTVIGTVTMT 554
|
|
| TAIR|locus:2045233 AT2G31820 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 140 (54.3 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 79/314 (25%), Positives = 138/314 (43%)
Query: 287 MRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPE-VVNEFIMAYDSSSNWSNQDG 345
M VE+V+ + F+ + A L A+ G + +V E + + + + G
Sbjct: 302 MGHVEVVKSLIGKDPSIGFRTDKKGQTA-LHMAVKGQNDGIVVELVKPDVAVLSVEDNKG 360
Query: 346 HTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGR-----LVPSSEVAGA 400
+T A R K+ + V+F + +KAG+ L ++ + LV + AGA
Sbjct: 361 NTPLHIATNKGRIKIVRCL--VSFEGINLNPINKAGDTPLDVSEKIGNAELVSVLKEAGA 418
Query: 401 AL--QMQRELQWFKAIENLVHPFFREATNDLKQTPRE-VFTEE-HKELVKEGEKWLKETA 456
A + + K ++ V E + L+Q+ + V ++ K L K L
Sbjct: 419 ATAKDLGKPQNPAKQLKQTVSDIKHEVQSQLQQSRQTGVRVQKIAKRLKKLHISGLNNAI 478
Query: 457 SSCSVVAALIITVVFAAVFTAPGG-----SDGR--GMPNFLHDQSFMIFAISDMLALFSS 509
+S +VVA LI TV FAA+FT PG S G G + + F++F I D LALF S
Sbjct: 479 NSATVVAVLIATVAFAAIFTIPGQYEEDRSKGELLGQAHIANKAPFLVFFIFDSLALFIS 538
Query: 510 ITSVLMFLGILTSRYAEEDFLVSLPKKLIIGLITLFFSIASMMVAFGATVHISLSHKWNS 569
+ V++ ++ + LV + KL+ LF SIA + +++ + + W +
Sbjct: 539 LAVVVVQTSVVVIEQKAKKKLVFVINKLM-WCACLFISIAFVSLSY---IVVGKEEMWLA 594
Query: 570 VIIPIALVGCVPIT 583
V + + G + +T
Sbjct: 595 VCATV-IGGTIMLT 607
|
|
| TAIR|locus:2157553 AT5G54710 "AT5G54710" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 121 (47.7 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 43/155 (27%), Positives = 74/155 (47%)
Query: 434 REVFTEEHKELVKEGEKWLKETASSCSVVAALIITVVFAAVFTAPGG--SDGR--GMPNF 489
RE +KE E L+ ++ ++VA LI +V F PGG DG G
Sbjct: 403 REGRDPRNKEREMHSES-LQNARNTITIVAVLIASVAFTCGINPPGGVHQDGPFIGKATA 461
Query: 490 LHDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEEDFLVSLPKKLIIGLITLFFSIA 549
+F IF++++ +ALF+S++ V + + I++ R V + K+ ++ ++A
Sbjct: 462 GRTLAFKIFSVANNIALFTSLSIVTLLVSIISYRTKALKMCVVIAHKM------MWLAVA 515
Query: 550 SMMVAFGATVHISLSH----KW----NSVIIPIAL 576
SM A+ A+ I++ H KW S I +AL
Sbjct: 516 SMATAYAASAWITVPHNEGSKWLVYTTSAIASVAL 550
|
|
| TAIR|locus:2092522 ITN1 "INCREASED TOLERANCE TO NACL" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 151 (58.2 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 48/161 (29%), Positives = 83/161 (51%)
Query: 414 IENLVHPFFREATNDLKQTPREVFTEEHKELVKEGEKWLKETASSCSVVAALIITVVFAA 473
I+N VH E T K+T + V KEL K + + +S +VVA L TV FAA
Sbjct: 382 IKNDVH-IQLEQT---KRTNKNVHNIS-KELRKLHREGINNATNSVTVVAVLFATVAFAA 436
Query: 474 VFTAPGGSDGRGMPNFLHDQSFMIFAISDMLALFSSITSVLMFLGILTSRYAEEDFLVSL 533
+FT PGG + G + SF IF I + LALF+S+ V++ + ++ E +V +
Sbjct: 437 IFTVPGGDNNDGSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGETKAEKRVVEV 496
Query: 534 PKKLIIGLITLFFSIASMMVAFGATVHISLSHKWNSVIIPI 574
KL+ L ++ S+A + ++ + + ++W + ++ +
Sbjct: 497 INKLM-WLASMCTSVAFLASSY---IVVGRKNEWAAELVTV 533
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 624 | |||
| pfam13962 | 114 | pfam13962, PGG, Domain of unknown function | 4e-26 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 3e-08 | |
| pfam12796 | 91 | pfam12796, Ank_2, Ankyrin repeats (3 copies) | 4e-07 | |
| pfam12796 | 91 | pfam12796, Ank_2, Ankyrin repeats (3 copies) | 2e-06 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 2e-05 | |
| pfam13637 | 54 | pfam13637, Ank_4, Ankyrin repeats (many copies) | 0.001 | |
| COG0666 | 235 | COG0666, Arp, FOG: Ankyrin repeat [General functio | 0.002 |
| >gnl|CDD|222475 pfam13962, PGG, Domain of unknown function | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 4e-26
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 449 EKWLKETASSCSVVAALIITVVFAAVFTAPGG------SDGRGMPNFLHDQS-FMIFAIS 501
+WL++T +S VVA LI TV FAA FT PGG G P F F +S
Sbjct: 1 SEWLEKTRNSLLVVATLIATVTFAAGFTPPGGYWQDDGGHHAGTPILAGKPRRFKAFFVS 60
Query: 502 DMLALFSSITSVLMFLGILTSRYAEEDFLVSLPKKLIIGLITLFFSIASMMVAFGATVHI 561
+ +A +S+ +V++ L Y F LP +L+ L L+ S+ S+MVAF A +
Sbjct: 61 NTIAFVASLVAVILLL------YIVPSFSRRLP-RLLALLTLLWLSLLSLMVAFAAGSYR 113
|
The PGG domain is named for the highly conserved sequence motif found at the startt of the domain. The function is not known. Length = 114 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 3e-08
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+D G T L+A+ G+L +KLL++ D+ N + +G P+H AA GH + LLE
Sbjct: 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGHLEIVKLLLE 61
Query: 128 VTHGVDIYS-GKDGANVLSFLIAANLYDVALDLLKRH 163
G D+ + KDG L DV LLK
Sbjct: 62 --KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHG 96
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 4e-07
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 73 HTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGV 132
TA L+A GNL +KLL+++ D+ N + +G +H AA G+ + LLE HG
Sbjct: 29 DTALHLAARNGNLEIVKLLLEHGADV-NAKDKDGNTALHLAARNGNLEIVKLLLE--HGA 85
Query: 133 DI 134
DI
Sbjct: 86 DI 87
|
Length = 91 |
| >gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 2e-06
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 78 LSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI-YS 136
L+A GNL +KLL++ D + G+ +H AA G+ + LLE HG D+
Sbjct: 3 LAAKNGNLELVKLLLEKGAD---VNLGDTDTALHLAARNGNLEIVKLLLE--HGADVNAK 57
Query: 137 GKDGANVLSFLIAANLYDVALDLLKRHPTI 166
KDG L ++ LL+ I
Sbjct: 58 DKDGNTALHLAARNGNLEIVKLLLEHGADI 87
|
Length = 91 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 2e-05
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLL 126
+D G+T L+A GNL +KLL+K+ D+ N R +G P+H AA GH + LL
Sbjct: 69 RDKDGNTPLHLAARNGNLDVVKLLLKHGADV-NARDKDGRTPLHLAAKNGHLEVVKLLL 126
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies) | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.001
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 72 GHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLL 126
G TA +A G L +K L++ D+ N +G +H AA G+ + LL
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDI-NRTDEDGNTALHIAAENGNLEVLKLLL 54
|
Length = 54 |
| >gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.8 bits (92), Expect = 0.002
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
Query: 48 EAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGF 107
E LL L + D + +D G+T +A G+ ++LL++ D N R+ G
Sbjct: 125 EVAKLL--LEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADP-NSRNSYGV 181
Query: 108 LPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAAN 151
+ AA G + LL+ + + + + N
Sbjct: 182 TALDPAAKNGRIELVKLLLDKGLHLSLLKFNLEGVANANVSKRN 225
|
Length = 235 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 624 | |||
| KOG0510 | 929 | consensus Ankyrin repeat protein [General function | 100.0 | |
| PHA02874 | 434 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02946 | 446 | ankyin-like protein; Provisional | 100.0 | |
| PHA02876 | 682 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02876 | 682 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA03095 | 471 | ankyrin-like protein; Provisional | 100.0 | |
| KOG0510 | 929 | consensus Ankyrin repeat protein [General function | 100.0 | |
| PHA02716 | 764 | CPXV016; CPX019; EVM010; Provisional | 100.0 | |
| PHA02946 | 446 | ankyin-like protein; Provisional | 100.0 | |
| PHA02874 | 434 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA03100 | 480 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02791 | 284 | ankyrin-like protein; Provisional | 100.0 | |
| PHA03095 | 471 | ankyrin-like protein; Provisional | 100.0 | |
| PHA02878 | 477 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02716 | 764 | CPXV016; CPX019; EVM010; Provisional | 100.0 | |
| PHA02875 | 413 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02917 | 661 | ankyrin-like protein; Provisional | 100.0 | |
| PHA02730 | 672 | ankyrin-like protein; Provisional | 100.0 | |
| PHA03100 | 480 | ankyrin repeat protein; Provisional | 100.0 | |
| KOG4412 | 226 | consensus 26S proteasome regulatory complex, subun | 100.0 | |
| PHA02989 | 494 | ankyrin repeat protein; Provisional | 100.0 | |
| KOG4412 | 226 | consensus 26S proteasome regulatory complex, subun | 100.0 | |
| PHA02791 | 284 | ankyrin-like protein; Provisional | 100.0 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 99.98 | |
| PHA02875 | 413 | ankyrin repeat protein; Provisional | 99.97 | |
| PHA02798 | 489 | ankyrin-like protein; Provisional | 99.97 | |
| PHA02917 | 661 | ankyrin-like protein; Provisional | 99.97 | |
| PHA02878 | 477 | ankyrin repeat protein; Provisional | 99.97 | |
| PHA02989 | 494 | ankyrin repeat protein; Provisional | 99.97 | |
| KOG4177 | 1143 | consensus Ankyrin [Cell wall/membrane/envelope bio | 99.97 | |
| PHA02798 | 489 | ankyrin-like protein; Provisional | 99.97 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.96 | |
| KOG4177 | 1143 | consensus Ankyrin [Cell wall/membrane/envelope bio | 99.96 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.96 | |
| PHA02730 | 672 | ankyrin-like protein; Provisional | 99.96 | |
| PHA02792 | 631 | ankyrin-like protein; Provisional | 99.96 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 99.94 | |
| PHA02859 | 209 | ankyrin repeat protein; Provisional | 99.94 | |
| PHA02792 | 631 | ankyrin-like protein; Provisional | 99.94 | |
| PHA02859 | 209 | ankyrin repeat protein; Provisional | 99.93 | |
| TIGR00870 | 743 | trp transient-receptor-potential calcium channel p | 99.92 | |
| KOG0507 | 854 | consensus CASK-interacting adaptor protein (caskin | 99.91 | |
| KOG0502 | 296 | consensus Integral membrane ankyrin-repeat protein | 99.91 | |
| TIGR00870 | 743 | trp transient-receptor-potential calcium channel p | 99.91 | |
| PHA02795 | 437 | ankyrin-like protein; Provisional | 99.91 | |
| PHA02795 | 437 | ankyrin-like protein; Provisional | 99.9 | |
| PF13962 | 113 | PGG: Domain of unknown function | 99.9 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.9 | |
| KOG0507 | 854 | consensus CASK-interacting adaptor protein (caskin | 99.87 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.87 | |
| KOG0502 | 296 | consensus Integral membrane ankyrin-repeat protein | 99.85 | |
| KOG0514 | 452 | consensus Ankyrin repeat protein [General function | 99.85 | |
| KOG4369 | 2131 | consensus RTK signaling protein MASK/UNC-44 [Signa | 99.84 | |
| KOG4369 | 2131 | consensus RTK signaling protein MASK/UNC-44 [Signa | 99.83 | |
| PHA02741 | 169 | hypothetical protein; Provisional | 99.83 | |
| KOG0505 | 527 | consensus Myosin phosphatase, regulatory subunit [ | 99.82 | |
| PHA02743 | 166 | Viral ankyrin protein; Provisional | 99.81 | |
| KOG0514 | 452 | consensus Ankyrin repeat protein [General function | 99.8 | |
| PHA02884 | 300 | ankyrin repeat protein; Provisional | 99.78 | |
| KOG0505 | 527 | consensus Myosin phosphatase, regulatory subunit [ | 99.78 | |
| PHA02736 | 154 | Viral ankyrin protein; Provisional | 99.78 | |
| KOG0512 | 228 | consensus Fetal globin-inducing factor (contains a | 99.77 | |
| PHA02741 | 169 | hypothetical protein; Provisional | 99.76 | |
| KOG3676 | 782 | consensus Ca2+-permeable cation channel OSM-9 and | 99.75 | |
| PHA02743 | 166 | Viral ankyrin protein; Provisional | 99.75 | |
| KOG0512 | 228 | consensus Fetal globin-inducing factor (contains a | 99.75 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.74 | |
| PHA02884 | 300 | ankyrin repeat protein; Provisional | 99.73 | |
| PHA02736 | 154 | Viral ankyrin protein; Provisional | 99.71 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.67 | |
| cd00204 | 126 | ANK ankyrin repeats; ankyrin repeats mediate prote | 99.66 | |
| PF12796 | 89 | Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 | 99.63 | |
| PF12796 | 89 | Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 | 99.59 | |
| KOG3676 | 782 | consensus Ca2+-permeable cation channel OSM-9 and | 99.59 | |
| cd00204 | 126 | ANK ankyrin repeats; ankyrin repeats mediate prote | 99.53 | |
| COG0666 | 235 | Arp FOG: Ankyrin repeat [General function predicti | 99.46 | |
| KOG4214 | 117 | consensus Myotrophin and similar proteins [Transcr | 99.45 | |
| KOG4214 | 117 | consensus Myotrophin and similar proteins [Transcr | 99.41 | |
| PF13637 | 54 | Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A | 99.35 | |
| PF13857 | 56 | Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A | 99.35 | |
| COG0666 | 235 | Arp FOG: Ankyrin repeat [General function predicti | 99.34 | |
| PF13637 | 54 | Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A | 99.3 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 99.29 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 99.29 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 99.28 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 99.27 | |
| PF13857 | 56 | Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A | 99.25 | |
| KOG0515 | 752 | consensus p53-interacting protein 53BP/ASPP, conta | 99.21 | |
| KOG0515 | 752 | consensus p53-interacting protein 53BP/ASPP, conta | 99.18 | |
| KOG0782 | 1004 | consensus Predicted diacylglycerol kinase [Signal | 98.93 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 98.61 | |
| KOG0782 | 1004 | consensus Predicted diacylglycerol kinase [Signal | 98.59 | |
| KOG3609 | 822 | consensus Receptor-activated Ca2+-permeable cation | 98.51 | |
| KOG0522 | 560 | consensus Ankyrin repeat protein [General function | 98.47 | |
| PF13606 | 30 | Ank_3: Ankyrin repeat | 98.44 | |
| PF13606 | 30 | Ank_3: Ankyrin repeat | 98.41 | |
| KOG0818 | 669 | consensus GTPase-activating proteins of the GIT fa | 98.4 | |
| KOG0506 | 622 | consensus Glutaminase (contains ankyrin repeat) [A | 98.4 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 98.39 | |
| KOG0506 | 622 | consensus Glutaminase (contains ankyrin repeat) [A | 98.38 | |
| PF00023 | 33 | Ank: Ankyrin repeat Hereditary spherocytosis; Inte | 98.36 | |
| KOG3609 | 822 | consensus Receptor-activated Ca2+-permeable cation | 98.36 | |
| KOG0522 | 560 | consensus Ankyrin repeat protein [General function | 98.34 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 98.33 | |
| PF00023 | 33 | Ank: Ankyrin repeat Hereditary spherocytosis; Inte | 98.29 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.25 | |
| KOG0818 | 669 | consensus GTPase-activating proteins of the GIT fa | 98.25 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 98.03 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 97.91 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 97.71 | |
| KOG2384 | 223 | consensus Major histocompatibility complex protein | 97.65 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 97.59 | |
| KOG2384 | 223 | consensus Major histocompatibility complex protein | 97.45 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.29 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 97.15 | |
| smart00248 | 30 | ANK ankyrin repeats. Ankyrin repeats are about 33 | 96.04 | |
| smart00248 | 30 | ANK ankyrin repeats. Ankyrin repeats are about 33 | 95.99 | |
| KOG2505 | 591 | consensus Ankyrin repeat protein [General function | 95.9 | |
| KOG2505 | 591 | consensus Ankyrin repeat protein [General function | 93.87 | |
| PF03158 | 192 | DUF249: Multigene family 530 protein; InterPro: IP | 93.77 | |
| PF06128 | 284 | Shigella_OspC: Shigella flexneri OspC protein; Int | 92.27 | |
| PF06128 | 284 | Shigella_OspC: Shigella flexneri OspC protein; Int | 87.3 | |
| PF11929 | 76 | DUF3447: Domain of unknown function (DUF3447); Int | 86.39 | |
| PF11929 | 76 | DUF3447: Domain of unknown function (DUF3447); Int | 84.87 | |
| cd07920 | 322 | Pumilio Pumilio-family RNA binding domain. Puf rep | 83.66 | |
| PF06570 | 206 | DUF1129: Protein of unknown function (DUF1129); In | 81.84 | |
| cd07920 | 322 | Pumilio Pumilio-family RNA binding domain. Puf rep | 81.54 |
| >KOG0510 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-38 Score=326.83 Aligned_cols=321 Identities=19% Similarity=0.139 Sum_probs=213.4
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
|..| .||||+|+. .. ..+.|+.|++.| ++....|.++.+|+|+|+..|+.++.+.|++++.+ ++..|..
T Consensus 85 D~~~-n~~l~~a~~----~~---~~~~i~~Lls~g--ad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~d-vnl~de~ 153 (929)
T KOG0510|consen 85 DSAD-NTPLHAAVE----YN---QGDKIQVLLSYG--ADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGAD-VNLEDEN 153 (929)
T ss_pred hccc-CchhHHHhh----cc---hHHHHHHHHhcC--CCCChhhhhccCchhhccccchHHHHHHHHHhcCC-ccccccC
Confidence 6666 777777777 77 777777777775 56666677777777777777777777777777765 6677777
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCC----CCCcccCCCCCCHHHHH
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHP----TIGRDSIDSRRIILNTL 181 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~----~l~~~~d~~G~TpLh~A 181 (624)
|.||||+||..++.|..+.|++.++++.. .|.+|.+|+|.|+++|..++.+..+..++ .-.+.-|.+|.||||.|
T Consensus 154 ~~TpLh~A~~~~~~E~~k~Li~~~a~~~K-~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlA 232 (929)
T KOG0510|consen 154 GFTPLHLAARKNKVEAKKELINKGADPCK-SDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLA 232 (929)
T ss_pred CCchhhHHHhcChHHHHHHHHhcCCCCCc-ccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhh
Confidence 77777777777777766777777777666 67777777777777777777777776322 12244566677777777
Q ss_pred HcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHH
Q 006942 182 AQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKL 261 (624)
Q Consensus 182 a~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (624)
+..++.- .+... +.+.. . .....-.......+.......+|+++
T Consensus 233 ve~g~~e----~lk~~---L~n~~-------------~---~a~~~~~~~~q~kelv~~~d~dg~tp------------- 276 (929)
T KOG0510|consen 233 VEGGDIE----MLKMC---LQNGK-------------K---IADVQLDAMQQEKELVNDEDNDGCTP------------- 276 (929)
T ss_pred hhcCCHH----HHHHH---HhCcc-------------c---cchhhhHHHHHHHHHhhcccccCCch-------------
Confidence 7666310 00000 00000 0 00000000000111111222222222
Q ss_pred HHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHH-ccCCCcee
Q 006942 262 HRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIM-AYDSSSNW 340 (624)
Q Consensus 262 ~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~-~~~~d~~~ 340 (624)
..++...|+.++++.|......+. +++.++.||||.||+.|+.+.|+.||+ . +--..+
T Consensus 277 ----------------LH~a~r~G~~~svd~Ll~~Ga~I~----~kn~d~~spLH~AA~yg~~ntv~rLL~~~-~~rlln 335 (929)
T KOG0510|consen 277 ----------------LHYAARQGGPESVDNLLGFGASIN----SKNKDEESPLHFAAIYGRINTVERLLQES-DTRLLN 335 (929)
T ss_pred ----------------HHHHHHcCChhHHHHHHHcCCccc----ccCCCCCCchHHHHHcccHHHHHHHHhCc-Cccccc
Confidence 345566677778888887777665 467788999999999999999999999 5 555555
Q ss_pred c-CCCCCcHHHHHHHcCChhHHHHHhcCCccccccc---cccCCCCchhhhhhhcCCCCCccchHHHhHHHHhHHHHHHh
Q 006942 341 S-NQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFS---SRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQWFKAIEN 416 (624)
Q Consensus 341 ~-d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn---~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~ 416 (624)
. |..|.||||+|+++||.+++++|++.| ++.+ ..|.+|+||||+|+++|+.. .|+.
T Consensus 336 e~D~~g~tpLHlaa~~gH~~v~qlLl~~G---A~~~~~~e~D~dg~TaLH~Aa~~g~~~-----------------av~~ 395 (929)
T KOG0510|consen 336 ESDLHGMTPLHLAAKSGHDRVVQLLLNKG---ALFLNMSEADSDGNTALHLAAKYGNTS-----------------AVQK 395 (929)
T ss_pred cccccCCCchhhhhhcCHHHHHHHHHhcC---hhhhcccccccCCchhhhHHHHhccHH-----------------HHHH
Confidence 5 999999999999999999999999999 3333 56999999999999999975 2444
Q ss_pred hcCc-ccccccCCCCCChhh
Q 006942 417 LVHP-FFREATNDLKQTPRE 435 (624)
Q Consensus 417 ~~~~-~~~~~~N~~G~Tp~d 435 (624)
++.. .++..+|+.|+|++|
T Consensus 396 Li~~Ga~I~~~n~~g~SA~~ 415 (929)
T KOG0510|consen 396 LISHGADIGVKNKKGKSAFD 415 (929)
T ss_pred HHHcCCceeecccccccccc
Confidence 4333 335566666666666
|
|
| >PHA02874 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-38 Score=334.41 Aligned_cols=271 Identities=16% Similarity=0.179 Sum_probs=231.0
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|+..||.+.++.+++..+..++.. +.+| .||||.|++ .| +.++|++|++.| .+++..+..|.||||.|+
T Consensus 8 ai~~gd~~~v~~ll~~~~~~~n~~-~~~~-~tpL~~A~~----~g---~~~iv~~Ll~~G--a~~n~~~~~~~t~L~~A~ 76 (434)
T PHA02874 8 CIYSGDIEAIEKIIKNKGNCINIS-VDET-TTPLIDAIR----SG---DAKIVELFIKHG--ADINHINTKIPHPLLTAI 76 (434)
T ss_pred HHhcCCHHHHHHHHHcCCCCCCCc-CCCC-CCHHHHHHH----cC---CHHHHHHHHHCC--CCCCCCCCCCCCHHHHHH
Confidence 678999999999999888777666 7788 999999999 99 999999999998 678889999999999999
Q ss_pred HcCCHHHHHHHHhcCCCC----------------------cccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCC
Q 006942 81 AKGNLRALKLLVKYNPDL----------------------TNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGK 138 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l----------------------~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~ 138 (624)
..|+.+++++|++++++. ++.+|..|.||||+|+..|+.+++++|++.+++.+. ++.
T Consensus 77 ~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~-~d~ 155 (434)
T PHA02874 77 KIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNI-EDD 155 (434)
T ss_pred HcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCC-cCC
Confidence 999999999999886542 456788999999999999999999999999999988 899
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccC
Q 006942 139 DGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTN 218 (624)
Q Consensus 139 ~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~ 218 (624)
+|.||||+|+..++.++++.|++.+.+. +..|..|.||||+|+..++
T Consensus 156 ~g~tpLh~A~~~~~~~iv~~Ll~~g~~~-n~~~~~g~tpL~~A~~~g~-------------------------------- 202 (434)
T PHA02874 156 NGCYPIHIAIKHNFFDIIKLLLEKGAYA-NVKDNNGESPLHNAAEYGD-------------------------------- 202 (434)
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCC--------------------------------
Confidence 9999999999999999999999998765 5678999999999997742
Q ss_pred CCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHh
Q 006942 219 DYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICE 298 (624)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~ 298 (624)
...+++ +.+
T Consensus 203 --------------------------------------------------------------------~~iv~~---Ll~ 211 (434)
T PHA02874 203 --------------------------------------------------------------------YACIKL---LID 211 (434)
T ss_pred --------------------------------------------------------------------HHHHHH---HHh
Confidence 112222 222
Q ss_pred hcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcC-ChhHHHHHhcCCccccccccc
Q 006942 299 GVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYR-REKVFNLIQGVNFTTFLFSSR 377 (624)
Q Consensus 299 ~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~-~~~iv~~Ll~~~~~~~~vn~~ 377 (624)
...... ..+..|.||||.|+..+. +.++.|+ . +.+....|..|+||||+|+..+ +.+++++|++.+ ..+|.+
T Consensus 212 ~g~~i~-~~~~~g~TpL~~A~~~~~-~~i~~Ll-~-~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~g---ad~n~~ 284 (434)
T PHA02874 212 HGNHIM-NKCKNGFTPLHNAIIHNR-SAIELLI-N-NASINDQDIDGSTPLHHAINPPCDIDIIDILLYHK---ADISIK 284 (434)
T ss_pred CCCCCc-CCCCCCCCHHHHHHHCCh-HHHHHHH-c-CCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCc---CCCCCC
Confidence 222111 256789999999999876 5667666 4 6777666999999999999876 789999999998 667799
Q ss_pred cCCCCchhhhhhhcCCC
Q 006942 378 DKAGNNILHLAGRLVPS 394 (624)
Q Consensus 378 D~~GnTpLHlAa~~~~~ 394 (624)
|.+|+||||+|++.++.
T Consensus 285 d~~g~TpL~~A~~~~~~ 301 (434)
T PHA02874 285 DNKGENPIDTAFKYINK 301 (434)
T ss_pred CCCCCCHHHHHHHhCCc
Confidence 99999999999998754
|
|
| >PHA02946 ankyin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=323.89 Aligned_cols=105 Identities=10% Similarity=-0.016 Sum_probs=72.8
Q ss_pred CCccccHHHHHHHHcCC-HHHHHHHHHccCCCc--------------------eec-CCCCCcHHHHHHHcCChhHHHHH
Q 006942 307 NSAQLSVAMLAAAILGI-PEVVNEFIMAYDSSS--------------------NWS-NQDGHTIFDHAVLYRREKVFNLI 364 (624)
Q Consensus 307 ~~~~g~tpLh~Aa~~g~-~~iv~~Ll~~~~~d~--------------------~~~-d~~G~T~Lh~A~~~~~~~iv~~L 364 (624)
.+..|.||||+|+..++ .++++.|+++ +.+. ... +..|+||||+|+++|+.+++++|
T Consensus 238 ~d~~G~TpLh~A~~~~~~~~~~~~Ll~~-g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~L 316 (446)
T PHA02946 238 QNKFGDSPLTLLIKTLSPAHLINKLLST-SNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYL 316 (446)
T ss_pred CCCCCCCHHHHHHHhCChHHHHHHHHhC-CCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHH
Confidence 67788888888888877 4788888877 6532 111 24577888888888888888888
Q ss_pred hcCCccccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcCc-ccccccCCCCCChhhhhhHH
Q 006942 365 QGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVHP-FFREATNDLKQTPREVFTEE 440 (624)
Q Consensus 365 l~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~~-~~~~~~N~~G~Tp~dl~~~~ 440 (624)
++++ .+|+||||+|+..++.+ .|+-++.. ..++.+ .+|+||++++...
T Consensus 317 l~~~----------~~~~t~L~~A~~~~~~~-----------------~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~ 365 (446)
T PHA02946 317 LDND----------IICEDAMYYAVLSEYET-----------------MVDYLLFNHFSVDSV-VNGHTCMSECVRL 365 (446)
T ss_pred HHCC----------CccccHHHHHHHhCHHH-----------------HHHHHHHCCCCCCCc-cccccHHHHHHHc
Confidence 8765 25788888888887632 23333222 235554 4799999987543
|
|
| >PHA02876 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-37 Score=345.67 Aligned_cols=339 Identities=17% Similarity=0.118 Sum_probs=243.9
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHh-----------------------------------------
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVE----------------------------------------- 39 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~----------------------------------------- 39 (624)
|+..|+.|.|+.+++++|..+... |..| .||||+|+.
T Consensus 48 A~~~g~~e~V~~ll~~~~~~~~~~-~~~~-~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 125 (682)
T PHA02876 48 ALQLRQIDIVEEIIQQNPELIYIT-DHKC-HSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLDEACIHIL 125 (682)
T ss_pred HHHHHhhhHHHHHHHhCcccchhh-chhh-ccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999877776 8889 999997772
Q ss_pred -------------------------hhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhc
Q 006942 40 -------------------------LLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKY 94 (624)
Q Consensus 40 -------------------------~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~ 94 (624)
.++..| +.+++++|++.| .+++.+|..|.||||+||..|+.++|++|+++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---~~~i~k~Ll~~G--advn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~ 200 (682)
T PHA02876 126 KEAISGNDIHYDKINESIEYMKLIKERIQQD---ELLIAEMLLEGG--ADVNAKDIYCITPIHYAAERGNAKMVNLLLSY 200 (682)
T ss_pred HHHhcCCcccHHhhccchhhhHHHHHHHHCC---cHHHHHHHHhCC--CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Confidence 001256 788999999997 78899999999999999999999999999999
Q ss_pred CCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCC-----------------------------CccccCCCCCcHHH
Q 006942 95 NPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHG-----------------------------VDIYSGKDGANVLS 145 (624)
Q Consensus 95 ~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~-----------------------------~~~~~~~~G~t~Lh 145 (624)
+++ ++..+.+|.||||+|+..|+.+++++|++.+.. .+. .+..|.||||
T Consensus 201 Gad-~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~-~d~~g~TpLh 278 (682)
T PHA02876 201 GAD-VNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNS-IDDCKNTPLH 278 (682)
T ss_pred CCC-cCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHH
Confidence 988 778889999999999999999988887766543 233 5667788888
Q ss_pred HHHHhCcH-HHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCC
Q 006942 146 FLIAANLY-DVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLD 224 (624)
Q Consensus 146 ~A~~~~~~-~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 224 (624)
+|+..++. ++++.|++.+.++ +.+|.+|.||||+|+..+. .....+.++.....+
T Consensus 279 ~Aa~~~~~~~iv~lLl~~gadi-n~~d~~g~TpLh~Aa~~g~------~~~~v~~Ll~~gadi----------------- 334 (682)
T PHA02876 279 HASQAPSLSRLVPKLLERGADV-NAKNIKGETPLYLMAKNGY------DTENIRTLIMLGADV----------------- 334 (682)
T ss_pred HHHhCCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCC------CHHHHHHHHHcCCCC-----------------
Confidence 88877775 4667777666553 5667778888888876642 111222222111100
Q ss_pred CcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhh-hhhhHHHHHHHHHhhcccc
Q 006942 225 GDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKL-THMRTVEIVRIICEGVVWT 303 (624)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~~~~~lL~~l~~~~~~~ 303 (624)
......+.+ . .+++... ++...+.+|.....++
T Consensus 335 --------------n~~d~~g~T----p-------------------------Lh~A~~~~~~~~iv~lLl~~gadi--- 368 (682)
T PHA02876 335 --------------NAADRLYIT----P-------------------------LHQASTLDRNKDIVITLLELGANV--- 368 (682)
T ss_pred --------------CCcccCCCc----H-------------------------HHHHHHhCCcHHHHHHHHHcCCCC---
Confidence 000001111 1 1122221 2333444443322222
Q ss_pred cccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCC-hhHHHHHhcCCccccccccccCCCC
Q 006942 304 NFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRR-EKVFNLIQGVNFTTFLFSSRDKAGN 382 (624)
Q Consensus 304 ~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~-~~iv~~Ll~~~~~~~~vn~~D~~Gn 382 (624)
+ ..+..|.||||+|+..|+.++++.|++. +++....+..|.||||+|+..++ ..++++|++.+ ..+|.+|.+|+
T Consensus 369 n-~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~-gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~g---adin~~d~~G~ 443 (682)
T PHA02876 369 N-ARDYCDKTPIHYAAVRNNVVIINTLLDY-GADIEALSQKIGTALHFALCGTNPYMSVKTLIDRG---ANVNSKNKDLS 443 (682)
T ss_pred c-cCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCC---CCCCcCCCCCC
Confidence 2 3677889999999999999999999999 88887778899999999987665 46788999888 56779999999
Q ss_pred chhhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcCc-ccccccCCCCCChhhhhhH
Q 006942 383 NILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVHP-FFREATNDLKQTPREVFTE 439 (624)
Q Consensus 383 TpLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~~-~~~~~~N~~G~Tp~dl~~~ 439 (624)
||||+|++.+... +.++.++.. ...+.+|.+|.||+.++.+
T Consensus 444 TpLh~Aa~~~~~~----------------~iv~lLl~~Gad~n~~d~~g~tpl~~a~~ 485 (682)
T PHA02876 444 TPLHYACKKNCKL----------------DVIEMLLDNGADVNAINIQNQYPLLIALE 485 (682)
T ss_pred hHHHHHHHhCCcH----------------HHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 9999999876421 123333333 4588899999999998754
|
|
| >PHA02876 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=341.31 Aligned_cols=303 Identities=13% Similarity=0.024 Sum_probs=237.2
Q ss_pred ccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHH
Q 006942 2 IEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAA 81 (624)
Q Consensus 2 a~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~ 81 (624)
+.+|+.+.++.|++.+ .+++.+ |..| .||||+||+ .| +.++|++|+++| ++++..+.+|.||||+|+.
T Consensus 153 i~~~~~~i~k~Ll~~G-advn~~-d~~G-~TpLh~Aa~----~G---~~~iv~~LL~~G--ad~n~~~~~g~t~L~~A~~ 220 (682)
T PHA02876 153 IQQDELLIAEMLLEGG-ADVNAK-DIYC-ITPIHYAAE----RG---NAKMVNLLLSYG--ADVNIIALDDLSVLECAVD 220 (682)
T ss_pred HHCCcHHHHHHHHhCC-CCCCCC-CCCC-CCHHHHHHH----CC---CHHHHHHHHHCC--CCcCccCCCCCCHHHHHHH
Confidence 4678888888777664 456676 8899 999999999 99 999999999998 7788899999999999999
Q ss_pred cCCHHHHHHHHhcCCCC----------------------------cccCCCCCChHHHHHHHcCCH-HHHHHHHHhcCCC
Q 006942 82 KGNLRALKLLVKYNPDL----------------------------TNIRHGEGFLPVHDAALYGHK-DTFHYLLEVTHGV 132 (624)
Q Consensus 82 ~g~~~iv~~Ll~~~~~l----------------------------~~~~n~~G~TPLh~Aa~~g~~-~iv~~Ll~~~~~~ 132 (624)
.|+.++++.|++.+++. ++..|..|.||||+|+..|+. +++++|++.+++.
T Consensus 221 ~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadi 300 (682)
T PHA02876 221 SKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADV 300 (682)
T ss_pred cCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCC
Confidence 99999999888765431 456678899999999999996 6999999999998
Q ss_pred ccccCCCCCcHHHHHHHhC-cHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccc
Q 006942 133 DIYSGKDGANVLSFLIAAN-LYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKEL 211 (624)
Q Consensus 133 ~~~~~~~G~t~Lh~A~~~~-~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~ 211 (624)
+. +|.+|.||||+|+..| ..++++.|+..+.+. +..|..|.||||+|+..+. .....+.++.....+
T Consensus 301 n~-~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadi-n~~d~~g~TpLh~A~~~~~------~~~iv~lLl~~gadi---- 368 (682)
T PHA02876 301 NA-KNIKGETPLYLMAKNGYDTENIRTLIMLGADV-NAADRLYITPLHQASTLDR------NKDIVITLLELGANV---- 368 (682)
T ss_pred CC-cCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCC-CCcccCCCcHHHHHHHhCC------cHHHHHHHHHcCCCC----
Confidence 88 8999999999999999 589999999887765 6789999999999997532 111222222211111
Q ss_pred cCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHH
Q 006942 212 VPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVE 291 (624)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~ 291 (624)
......|.+ ..+++...++...++
T Consensus 369 ---------------------------n~~d~~G~T-----------------------------pLh~Aa~~~~~~iv~ 392 (682)
T PHA02876 369 ---------------------------NARDYCDKT-----------------------------PIHYAAVRNNVVIIN 392 (682)
T ss_pred ---------------------------ccCCCCCCC-----------------------------HHHHHHHcCCHHHHH
Confidence 001111111 123455556666666
Q ss_pred HHHHHHhhcccccccCCccccHHHHHHHHcCC-HHHHHHHHHccCCCceecCCCCCcHHHHHHHcC-ChhHHHHHhcCCc
Q 006942 292 IVRIICEGVVWTNFQNSAQLSVAMLAAAILGI-PEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYR-REKVFNLIQGVNF 369 (624)
Q Consensus 292 lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~-~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~-~~~iv~~Ll~~~~ 369 (624)
.|.....+.. ..+..|.||||+|+..++ .++++.|++. +.+++..|..|+||||+|+..+ +.+++++|++.|
T Consensus 393 ~Ll~~gad~~----~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~-gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~G- 466 (682)
T PHA02876 393 TLLDYGADIE----ALSQKIGTALHFALCGTNPYMSVKTLIDR-GANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNG- 466 (682)
T ss_pred HHHHCCCCcc----ccCCCCCchHHHHHHcCCHHHHHHHHHhC-CCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCC-
Confidence 6654433332 256778999999998766 5679999999 9888777999999999999976 689999999998
Q ss_pred cccccccccCCCCchhhhhhhcC
Q 006942 370 TTFLFSSRDKAGNNILHLAGRLV 392 (624)
Q Consensus 370 ~~~~vn~~D~~GnTpLHlAa~~~ 392 (624)
..+|.+|..|+||||+|+..+
T Consensus 467 --ad~n~~d~~g~tpl~~a~~~~ 487 (682)
T PHA02876 467 --ADVNAINIQNQYPLLIALEYH 487 (682)
T ss_pred --CCCCCCCCCCCCHHHHHHHhC
Confidence 667899999999999999765
|
|
| >PHA03095 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=326.85 Aligned_cols=277 Identities=17% Similarity=0.139 Sum_probs=235.6
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|+.+++.+.|+.+++.+ ..++.+ +..| .||||+|+. .|+..+.++++.|++.| ++++.+|..|.||||+|+
T Consensus 21 ~~~~~~~~~v~~Ll~~g-a~vn~~-~~~g-~t~Lh~a~~----~~~~~~~~iv~~Ll~~G--adin~~~~~g~TpLh~A~ 91 (471)
T PHA03095 21 NASNVTVEEVRRLLAAG-ADVNFR-GEYG-KTPLHLYLH----YSSEKVKDIVRLLLEAG--ADVNAPERCGFTPLHLYL 91 (471)
T ss_pred cCCCCCHHHHHHHHHcC-CCcccC-CCCC-CCHHHHHHH----hcCCChHHHHHHHHHCC--CCCCCCCCCCCCHHHHHH
Confidence 46788999999999774 456666 8899 999999999 76455899999999998 788999999999999999
Q ss_pred HcC-CHHHHHHHHhcCCCCcccCCCCCChHHHHHH--HcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC--cHHH
Q 006942 81 AKG-NLRALKLLVKYNPDLTNIRHGEGFLPVHDAA--LYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAAN--LYDV 155 (624)
Q Consensus 81 ~~g-~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa--~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~--~~~~ 155 (624)
..| +.+++++|++++++ ++.+|..|.||||+|+ ..++.+++++|++.+++++. .+..|.||||+|+..+ +.++
T Consensus 92 ~~~~~~~iv~lLl~~ga~-in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~-~d~~g~tpL~~a~~~~~~~~~i 169 (471)
T PHA03095 92 YNATTLDVIKLLIKAGAD-VNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNA-LDLYGMTPLAVLLKSRNANVEL 169 (471)
T ss_pred HcCCcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCCCHHH
Confidence 999 59999999999998 8899999999999999 56789999999999999988 8999999999999876 6799
Q ss_pred HHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhc
Q 006942 156 ALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSK 235 (624)
Q Consensus 156 v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (624)
++.|++.+.+.... |..|.||||+++.....
T Consensus 170 v~~Ll~~g~~~~~~-d~~g~t~Lh~~~~~~~~------------------------------------------------ 200 (471)
T PHA03095 170 LRLLIDAGADVYAV-DDRFRSLLHHHLQSFKP------------------------------------------------ 200 (471)
T ss_pred HHHHHHcCCCCccc-CCCCCCHHHHHHHHCCC------------------------------------------------
Confidence 99999998887555 89999999999864210
Q ss_pred ccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHH
Q 006942 236 IHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAM 315 (624)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpL 315 (624)
+...++. +.+...... ..+..|.|||
T Consensus 201 --------------------------------------------------~~~i~~~---Ll~~g~~~~-~~d~~g~tpL 226 (471)
T PHA03095 201 --------------------------------------------------RARIVRE---LIRAGCDPA-ATDMLGNTPL 226 (471)
T ss_pred --------------------------------------------------cHHHHHH---HHHcCCCCc-ccCCCCCCHH
Confidence 0011222 222222112 3788899999
Q ss_pred HHHHHcCCH--HHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCC
Q 006942 316 LAAAILGIP--EVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVP 393 (624)
Q Consensus 316 h~Aa~~g~~--~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 393 (624)
|+|+..|+. .+++.|++. +.+++..|..|+||||+|+..|+.+++++|++.| .++|.+|.+|+||||+|+..++
T Consensus 227 h~Aa~~~~~~~~~v~~ll~~-g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~g---ad~n~~~~~g~tpl~~A~~~~~ 302 (471)
T PHA03095 227 HSMATGSSCKRSLVLPLLIA-GISINARNRYGQTPLHYAAVFNNPRACRRLIALG---ADINAVSSDGNTPLSLMVRNNN 302 (471)
T ss_pred HHHHhcCCchHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCcccCCCCCCHHHHHHHhCC
Confidence 999999975 688899999 8888877999999999999999999999999998 6678999999999999999998
Q ss_pred CC
Q 006942 394 SS 395 (624)
Q Consensus 394 ~~ 395 (624)
.+
T Consensus 303 ~~ 304 (471)
T PHA03095 303 GR 304 (471)
T ss_pred HH
Confidence 65
|
|
| >KOG0510 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=300.91 Aligned_cols=268 Identities=15% Similarity=0.135 Sum_probs=173.9
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|+..|+.+..+.+++.. .+++.. ++.| .||||+||. .+ +.|..+.|++.+ +++...|.+|++|+|.|+
T Consensus 128 A~~~~~~s~L~~Ll~~~-~dvnl~-de~~-~TpLh~A~~----~~---~~E~~k~Li~~~--a~~~K~~~~~~~~iH~aa 195 (929)
T KOG0510|consen 128 AADSGNYSCLKLLLDYG-ADVNLE-DENG-FTPLHLAAR----KN---KVEAKKELINKG--ADPCKSDIDGNFPIHEAA 195 (929)
T ss_pred ccccchHHHHHHHHHhc-CCcccc-ccCC-CchhhHHHh----cC---hHHHHHHHHhcC--CCCCcccCcCCchHHHHH
Confidence 44555566665555554 334443 5555 666666666 66 666556666654 455556666666666666
Q ss_pred HcCCHHHHHHHHhcCC----CCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccc--------------cCCCCCc
Q 006942 81 AKGNLRALKLLVKYNP----DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIY--------------SGKDGAN 142 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~----~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~--------------~~~~G~t 142 (624)
++|..|+.+..+.+.+ .-++.-|..|.||||.|+..|+.++++..|+.+...... .|++|.|
T Consensus 196 ~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~t 275 (929)
T KOG0510|consen 196 RSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCT 275 (929)
T ss_pred HhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCc
Confidence 6666666666665211 114455566666666666666666666666655432111 4566666
Q ss_pred HHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCC
Q 006942 143 VLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHD 222 (624)
Q Consensus 143 ~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 222 (624)
|||+|++.|+.+.+..|+..+.++ +.+++++.||||.||..|+
T Consensus 276 pLH~a~r~G~~~svd~Ll~~Ga~I-~~kn~d~~spLH~AA~yg~------------------------------------ 318 (929)
T KOG0510|consen 276 PLHYAARQGGPESVDNLLGFGASI-NSKNKDEESPLHFAAIYGR------------------------------------ 318 (929)
T ss_pred hHHHHHHcCChhHHHHHHHcCCcc-cccCCCCCCchHHHHHccc------------------------------------
Confidence 666666666666666666665554 4455666666666665532
Q ss_pred CCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhccc
Q 006942 223 LDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVW 302 (624)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~ 302 (624)
..+++-|.. ..+..
T Consensus 319 ----------------------------------------------------------------~ntv~rLL~-~~~~r- 332 (929)
T KOG0510|consen 319 ----------------------------------------------------------------INTVERLLQ-ESDTR- 332 (929)
T ss_pred ----------------------------------------------------------------HHHHHHHHh-CcCcc-
Confidence 122222222 00111
Q ss_pred ccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCcee--c-CCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccC
Q 006942 303 TNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNW--S-NQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDK 379 (624)
Q Consensus 303 ~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~--~-d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~ 379 (624)
.....|-.|.||||.|+++||..+++.||++ |+.... . |++|.||||.|+..|+..+|++|+.+| ..+..+|+
T Consensus 333 llne~D~~g~tpLHlaa~~gH~~v~qlLl~~-GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~G---a~I~~~n~ 408 (929)
T KOG0510|consen 333 LLNESDLHGMTPLHLAAKSGHDRVVQLLLNK-GALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHG---ADIGVKNK 408 (929)
T ss_pred ccccccccCCCchhhhhhcCHHHHHHHHHhc-ChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcC---Cceeeccc
Confidence 0123667789999999999999999999999 998884 4 999999999999999999999999999 55669999
Q ss_pred CCCchhhh
Q 006942 380 AGNNILHL 387 (624)
Q Consensus 380 ~GnTpLHl 387 (624)
.|.|++|+
T Consensus 409 ~g~SA~~~ 416 (929)
T KOG0510|consen 409 KGKSAFDT 416 (929)
T ss_pred cccccccc
Confidence 99999996
|
|
| >PHA02716 CPXV016; CPX019; EVM010; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=320.96 Aligned_cols=171 Identities=16% Similarity=0.114 Sum_probs=146.0
Q ss_pred cCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHc
Q 006942 3 EKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAK 82 (624)
Q Consensus 3 ~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~ 82 (624)
..++.+.++.+++....+++.+.+..| .||||.|+.. ..+ +.++|++|++.| .+++.+|.+|.||||+|+..
T Consensus 151 ~~v~leiVk~LLe~G~ADIN~~~d~~G-~TpLH~A~~n--~~~---~~eIVklLLe~G--ADVN~kD~~G~TPLH~Aa~~ 222 (764)
T PHA02716 151 RGIDLDLIKYMVDVGIVNLNYVCKKTG-YGILHAYLGN--MYV---DIDILEWLCNNG--VNVNLQNNHLITPLHTYLIT 222 (764)
T ss_pred cCCCHHHHHHHHHCCCCCcccccCCCC-CcHHHHHHHh--ccC---CHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHc
Confidence 468999999999887355665547789 9999998750 036 789999999997 78899999999999999999
Q ss_pred CC--HHHHHHHHhcCCCCcccCCCCCChHHHHH-------------------------------------HHcCCHHHHH
Q 006942 83 GN--LRALKLLVKYNPDLTNIRHGEGFLPVHDA-------------------------------------ALYGHKDTFH 123 (624)
Q Consensus 83 g~--~~iv~~Ll~~~~~l~~~~n~~G~TPLh~A-------------------------------------a~~g~~~iv~ 123 (624)
|+ .++|++|++++++ ++.+|..|.||||+| +..|+.++++
T Consensus 223 g~~~~eIVklLLe~GAD-VN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVk 301 (764)
T PHA02716 223 GNVCASVIKKIIELGGD-MDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVY 301 (764)
T ss_pred CCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHH
Confidence 95 5999999999998 889999999999975 4557889999
Q ss_pred HHHHhcCCCccccCCCCCcHHHHHHH--hCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 124 YLLEVTHGVDIYSGKDGANVLSFLIA--ANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 124 ~Ll~~~~~~~~~~~~~G~t~Lh~A~~--~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
+|++.+++.+. +|.+|+||||+|+. .++.++++.|++.+.++ +.+|..|+||||+|+..
T Consensus 302 lLLe~GAdIN~-kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADI-N~kD~~G~TPLH~A~~~ 362 (764)
T PHA02716 302 SFLQPGVKLHY-KDSAGRTCLHQYILRHNISTDIIKLLHEYGNDL-NEPDNIGNTVLHTYLSM 362 (764)
T ss_pred HHHhCCCceec-cCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCC-ccCCCCCCCHHHHHHHh
Confidence 99999999888 89999999999864 45789999999988765 67899999999998753
|
|
| >PHA02946 ankyin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=311.15 Aligned_cols=315 Identities=14% Similarity=0.090 Sum_probs=228.5
Q ss_pred cCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHc
Q 006942 3 EKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAK 82 (624)
Q Consensus 3 ~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~ 82 (624)
..++.+.|+.+++.. ..++.+ |.+| +||||+||. .| +.++|+.|+++| ++++.+|.+|.||||+|+..
T Consensus 48 ~~~~~~iv~~Ll~~G-advn~~-d~~G-~TpLh~Aa~----~g---~~eiv~lLL~~G--Adin~~d~~g~TpLh~A~~~ 115 (446)
T PHA02946 48 KGLDERFVEELLHRG-YSPNET-DDDG-NYPLHIASK----IN---NNRIVAMLLTHG--ADPNACDKQHKTPLYYLSGT 115 (446)
T ss_pred cCCCHHHHHHHHHCc-CCCCcc-CCCC-CCHHHHHHH----cC---CHHHHHHHHHCc--CCCCCCCCCCCCHHHHHHHc
Confidence 345678888888765 456676 8999 999999999 99 999999999997 78899999999999999987
Q ss_pred C--CHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCc--HHHHHH
Q 006942 83 G--NLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANL--YDVALD 158 (624)
Q Consensus 83 g--~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~--~~~v~~ 158 (624)
+ +.+++++|++++++.-...|..|.|||| ||..|+.+++++|++.+.+.+. +|..|+||||.|+..++ .+++++
T Consensus 116 ~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~-~d~~G~t~Lh~A~~~~~~~~~~v~~ 193 (446)
T PHA02946 116 DDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARI-VDKFGKNHIHRHLMSDNPKASTISW 193 (446)
T ss_pred CCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccc-cCCCCCCHHHHHHHhcCCCHHHHHH
Confidence 6 4899999999999844457899999997 7778999999999999999888 89999999999987654 689999
Q ss_pred HHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccC
Q 006942 159 LLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHS 238 (624)
Q Consensus 159 Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (624)
|++.+.++ +.+|.+|.||||+|+..+. .....++.++. ...+
T Consensus 194 Ll~~Gadi-n~~d~~G~TpLH~Aa~~~~-----~~~~iv~lLl~-gadi------------------------------- 235 (446)
T PHA02946 194 MMKLGISP-SKPDHDGNTPLHIVCSKTV-----KNVDIINLLLP-STDV------------------------------- 235 (446)
T ss_pred HHHcCCCC-cccCCCCCCHHHHHHHcCC-----CcHHHHHHHHc-CCCC-------------------------------
Confidence 99988765 6789999999999997642 12233333321 1111
Q ss_pred cccccCCCCcchhhhhhhhhHHH-HHHhhhccCCCCCCcc--chHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHH
Q 006942 239 KESTRFGSTQQITTTFGAMLHKL-HRMLWNAXMHLSPGIK--GIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAM 315 (624)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~--~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpL 315 (624)
...+..|.+ +++-++...+ .+..+.+...+..... .......+....++++.. ..+..|.|||
T Consensus 236 n~~d~~G~T----pLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~----------~g~~~~~TpL 301 (446)
T PHA02946 236 NKQNKFGDS----PLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIIND----------KGKQYDSTDF 301 (446)
T ss_pred CCCCCCCCC----HHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHH----------cCcccCCCHH
Confidence 011112222 2222222111 1122122111110000 011111122223333321 1234578999
Q ss_pred HHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCC
Q 006942 316 LAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 316 h~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 395 (624)
|+|+.+|+.++|++|+++ + ..|+||||+|+.+++.+++++|+.++ ..+|.+ .+|+||||+|++.++.+
T Consensus 302 h~Aa~~g~~eivk~Ll~~-~-------~~~~t~L~~A~~~~~~~~v~~Ll~~g---a~~n~~-~~G~t~l~~a~~~~~~~ 369 (446)
T PHA02946 302 KMAVEVGSIRCVKYLLDN-D-------IICEDAMYYAVLSEYETMVDYLLFNH---FSVDSV-VNGHTCMSECVRLNNPV 369 (446)
T ss_pred HHHHHcCCHHHHHHHHHC-C-------CccccHHHHHHHhCHHHHHHHHHHCC---CCCCCc-cccccHHHHHHHcCCHH
Confidence 999999999999999998 4 46899999999999999999999999 556675 68999999999999854
|
|
| >PHA02874 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=311.42 Aligned_cols=271 Identities=15% Similarity=0.155 Sum_probs=222.2
Q ss_pred hHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHH
Q 006942 32 TIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVH 111 (624)
Q Consensus 32 T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh 111 (624)
..|+.|+. .| +.+.|+.|++.. +..++..+.+|.||||.|+..|+.++|++|++.+++ ++..+..|.||||
T Consensus 3 ~~l~~ai~----~g---d~~~v~~ll~~~-~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~-~n~~~~~~~t~L~ 73 (434)
T PHA02874 3 QDLRMCIY----SG---DIEAIEKIIKNK-GNCINISVDETTTPLIDAIRSGDAKIVELFIKHGAD-INHINTKIPHPLL 73 (434)
T ss_pred HHHHHHHh----cC---CHHHHHHHHHcC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHH
Confidence 56899999 99 999999999875 466788899999999999999999999999999998 7788999999999
Q ss_pred HHHHcCCHHHHHHHHHhcCCC-----------------------ccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCc
Q 006942 112 DAALYGHKDTFHYLLEVTHGV-----------------------DIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGR 168 (624)
Q Consensus 112 ~Aa~~g~~~iv~~Ll~~~~~~-----------------------~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~ 168 (624)
+|+..|+.+++++|++++.+. +. ++..|.||||+|+..|+.++++.|++.+.++ +
T Consensus 74 ~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~-~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~-n 151 (434)
T PHA02874 74 TAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNI-KDAELKTFLHYAIKKGDLESIKMLFEYGADV-N 151 (434)
T ss_pred HHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCC-CCCCCccHHHHHHHCCCHHHHHHHHhCCCCC-C
Confidence 999999999999999887543 23 6889999999999999999999999998775 6
Q ss_pred ccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCc
Q 006942 169 DSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQ 248 (624)
Q Consensus 169 ~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (624)
.+|..|.||||+|+..++
T Consensus 152 ~~d~~g~tpLh~A~~~~~-------------------------------------------------------------- 169 (434)
T PHA02874 152 IEDDNGCYPIHIAIKHNF-------------------------------------------------------------- 169 (434)
T ss_pred CcCCCCCCHHHHHHHCCc--------------------------------------------------------------
Confidence 678999999999997642
Q ss_pred chhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHH
Q 006942 249 QITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVN 328 (624)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~ 328 (624)
.++++.+.+...... ..+..|.||||+|+..|+.++++
T Consensus 170 -----------------------------------------~~iv~~Ll~~g~~~n-~~~~~g~tpL~~A~~~g~~~iv~ 207 (434)
T PHA02874 170 -----------------------------------------FDIIKLLLEKGAYAN-VKDNNGESPLHNAAEYGDYACIK 207 (434)
T ss_pred -----------------------------------------HHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHH
Confidence 122222233222112 26778999999999999999999
Q ss_pred HHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHH
Q 006942 329 EFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQREL 408 (624)
Q Consensus 329 ~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l 408 (624)
+|++. +++....+..|+||||.|+..++ +++++|+. + ..+|.+|.+|+||||+|+..+...
T Consensus 208 ~Ll~~-g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll~-~---~~in~~d~~G~TpLh~A~~~~~~~------------- 268 (434)
T PHA02874 208 LLIDH-GNHIMNKCKNGFTPLHNAIIHNR-SAIELLIN-N---ASINDQDIDGSTPLHHAINPPCDI------------- 268 (434)
T ss_pred HHHhC-CCCCcCCCCCCCCHHHHHHHCCh-HHHHHHHc-C---CCCCCcCCCCCCHHHHHHhcCCcH-------------
Confidence 99999 98877668999999999999876 56666664 3 457799999999999999876421
Q ss_pred hHHHHHHhhcC-cccccccCCCCCChhhhhhH
Q 006942 409 QWFKAIENLVH-PFFREATNDLKQTPREVFTE 439 (624)
Q Consensus 409 ~~~~~v~~~~~-~~~~~~~N~~G~Tp~dl~~~ 439 (624)
+.++-++. ....+.+|++|+||++++.+
T Consensus 269 ---~iv~~Ll~~gad~n~~d~~g~TpL~~A~~ 297 (434)
T PHA02874 269 ---DIIDILLYHKADISIKDNKGENPIDTAFK 297 (434)
T ss_pred ---HHHHHHHHCcCCCCCCCCCCCCHHHHHHH
Confidence 11222222 24588999999999999864
|
|
| >PHA03100 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=313.92 Aligned_cols=267 Identities=17% Similarity=0.161 Sum_probs=228.4
Q ss_pred HHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHH-----HHH
Q 006942 7 WQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATL-----SAA 81 (624)
Q Consensus 7 ~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~-----Aa~ 81 (624)
.+.++.++++ +...+.. +..| .||||.|++ .| +.++|+.|++.| .+++..+..|.||||+ |+.
T Consensus 15 ~~~~~~~~~~-~~~~~~~-~~~~-~t~L~~A~~----~~---~~~ivk~Ll~~g--~~~~~~~~~~~t~L~~~~~~~a~~ 82 (480)
T PHA03100 15 VKNIKYIIME-DDLNDYS-YKKP-VLPLYLAKE----AR---NIDVVKILLDNG--ADINSSTKNNSTPLHYLSNIKYNL 82 (480)
T ss_pred HHHHHHHHhc-Cccchhh-hccc-chhhhhhhc----cC---CHHHHHHHHHcC--CCCCCccccCcCHHHHHHHHHHHh
Confidence 3556666654 3334343 7788 999999999 99 999999999997 6788899999999999 999
Q ss_pred cCCHHHHHHHHhcCCCCcccCCCCCChHHHHHH--HcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC--cHHHHH
Q 006942 82 KGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAA--LYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAAN--LYDVAL 157 (624)
Q Consensus 82 ~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa--~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~--~~~~v~ 157 (624)
.|+.++++.|++++++ ++..|..|.||||+|+ ..|+.+++++|++.+++.+. .+..|.||||+|+..+ +.++++
T Consensus 83 ~~~~~iv~~Ll~~ga~-i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~iv~ 160 (480)
T PHA03100 83 TDVKEIVKLLLEYGAN-VNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNI-KNSDGENLLHLYLESNKIDLKILK 160 (480)
T ss_pred hchHHHHHHHHHCCCC-CCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCc-cCCCCCcHHHHHHHcCCChHHHHH
Confidence 9999999999999999 5899999999999999 99999999999999999888 8999999999999999 999999
Q ss_pred HHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhccc
Q 006942 158 DLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIH 237 (624)
Q Consensus 158 ~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (624)
.|++.+.++ +.+|..|.||||+|+..++ ..
T Consensus 161 ~Ll~~g~di-n~~d~~g~tpL~~A~~~~~-------~~------------------------------------------ 190 (480)
T PHA03100 161 LLIDKGVDI-NAKNRYGYTPLHIAVEKGN-------ID------------------------------------------ 190 (480)
T ss_pred HHHHCCCCc-ccccCCCCCHHHHHHHhCC-------HH------------------------------------------
Confidence 999998876 5678899999999998742 11
Q ss_pred CcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccc------
Q 006942 238 SKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQL------ 311 (624)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g------ 311 (624)
.+++ +.+....... .+..|
T Consensus 191 ---------------------------------------------------iv~~---Ll~~ga~~~~-~~~~~~~~~~~ 215 (480)
T PHA03100 191 ---------------------------------------------------VIKF---LLDNGADINA-GDIETLLFTIF 215 (480)
T ss_pred ---------------------------------------------------HHHH---HHHcCCCccC-CCCCCCcHHHH
Confidence 2222 2222221111 44455
Q ss_pred cHHHHHHHHcCC--HHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhh
Q 006942 312 SVAMLAAAILGI--PEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAG 389 (624)
Q Consensus 312 ~tpLh~Aa~~g~--~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa 389 (624)
.||||.|+..|+ .++++.|++. |.++...|..|+||||+|+..++.+++++|++.| .++|.+|.+|+||||+|+
T Consensus 216 ~t~l~~a~~~~~~~~~iv~~Ll~~-g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~g---ad~n~~d~~g~tpl~~A~ 291 (480)
T PHA03100 216 ETPLHIAACYNEITLEVVNYLLSY-GVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLG---ANPNLVNKYGDTPLHIAI 291 (480)
T ss_pred HhHHHHHHHhCcCcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCccCCCCCcHHHHHH
Confidence 899999999999 9999999999 9888777999999999999999999999999998 567899999999999999
Q ss_pred hcCCCCC
Q 006942 390 RLVPSSE 396 (624)
Q Consensus 390 ~~~~~~~ 396 (624)
+.++.+.
T Consensus 292 ~~~~~~i 298 (480)
T PHA03100 292 LNNNKEI 298 (480)
T ss_pred HhCCHHH
Confidence 9988653
|
|
| >PHA02791 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=282.11 Aligned_cols=220 Identities=12% Similarity=0.038 Sum_probs=164.4
Q ss_pred CCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCC
Q 006942 5 NDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGN 84 (624)
Q Consensus 5 G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 84 (624)
++.+.++.+++.+. +.+ |.+| +||||+|+. .| +.++++.|++.+ ++++.+ +|.||||+|+..|+
T Consensus 10 ~~~~~~~~Lis~~a---~~~-D~~G-~TpLh~Aa~----~g---~~eiv~~Ll~~g--a~~n~~--d~~TpLh~Aa~~g~ 73 (284)
T PHA02791 10 KSKQLKSFLSSKDA---FKA-DVHG-HSALYYAIA----DN---NVRLVCTLLNAG--ALKNLL--ENEFPLHQAATLED 73 (284)
T ss_pred CHHHHHHHHHhCCC---CCC-CCCC-CcHHHHHHH----cC---CHHHHHHHHHCc--CCCcCC--CCCCHHHHHHHCCC
Confidence 34455554544332 233 6777 888888888 88 888888888776 344443 35788888888888
Q ss_pred HHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCC-cHHHHHHHhCcHHHHHHHHHhC
Q 006942 85 LRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGA-NVLSFLIAANLYDVALDLLKRH 163 (624)
Q Consensus 85 ~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~-t~Lh~A~~~~~~~~v~~Ll~~~ 163 (624)
.++|++|++.+++ ++.+|..|.||||+|+..|+.+++++|++.+++.+. ++..|+ ||||+|+..|+.++++.|+++.
T Consensus 74 ~eiV~lLL~~Gad-vn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~-~~~~g~~TpL~~Aa~~g~~eivk~LL~~~ 151 (284)
T PHA02791 74 TKIVKILLFSGMD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF-YGKTGWKTSFYHAVMLNDVSIVSYFLSEI 151 (284)
T ss_pred HHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc-cCCCCCcHHHHHHHHcCCHHHHHHHHhcC
Confidence 8888888887776 667777888888888888888888888888777766 666664 7888888888888888887653
Q ss_pred CCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCccccc
Q 006942 164 PTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTR 243 (624)
Q Consensus 164 ~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (624)
++..
T Consensus 152 ~~~~---------------------------------------------------------------------------- 155 (284)
T PHA02791 152 PSTF---------------------------------------------------------------------------- 155 (284)
T ss_pred Cccc----------------------------------------------------------------------------
Confidence 3110
Q ss_pred CCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCC
Q 006942 244 FGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGI 323 (624)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~ 323 (624)
....|.||||+|+.+|+
T Consensus 156 ---------------------------------------------------------------d~~~g~TpLh~Aa~~g~ 172 (284)
T PHA02791 156 ---------------------------------------------------------------DLAILLSCIHITIKNGH 172 (284)
T ss_pred ---------------------------------------------------------------ccccCccHHHHHHHcCC
Confidence 11235788889999999
Q ss_pred HHHHHHHHHccCCCceecCCCCCcH-HHHHHHcCChhHHHHHhcCCccccccccccCCCCchhh
Q 006942 324 PEVVNEFIMAYDSSSNWSNQDGHTI-FDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILH 386 (624)
Q Consensus 324 ~~iv~~Ll~~~~~d~~~~d~~G~T~-Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLH 386 (624)
.++++.|+++ ++++...|..|.|| ||+|+.+|+.+++++|+++| ..+|++|.+| |||+
T Consensus 173 ~eiv~lLL~~-gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~G---a~in~~~~~~-~~l~ 231 (284)
T PHA02791 173 VDMMILLLDY-MTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYD---INIYSVNLEN-VLLD 231 (284)
T ss_pred HHHHHHHHHC-CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCC---CCCccCcccC-ccCC
Confidence 9999999998 88887668888877 99999999999999999988 6678999854 7773
|
|
| >PHA03095 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=308.46 Aligned_cols=271 Identities=16% Similarity=0.123 Sum_probs=225.7
Q ss_pred HHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcC---CHHHHHHHHhcCCCCcccCCCCCChHHH
Q 006942 35 HMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKG---NLRALKLLVKYNPDLTNIRHGEGFLPVH 111 (624)
Q Consensus 35 h~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g---~~~iv~~Ll~~~~~l~~~~n~~G~TPLh 111 (624)
..|+. .+ +.++|+.|++.| .+++.++..|.||||+|+..| +.++++.|++.+++ ++.++..|.||||
T Consensus 19 ~~~~~----~~---~~~~v~~Ll~~g--a~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gad-in~~~~~g~TpLh 88 (471)
T PHA03095 19 LLNAS----NV---TVEEVRRLLAAG--ADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGAD-VNAPERCGFTPLH 88 (471)
T ss_pred HHcCC----CC---CHHHHHHHHHcC--CCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCC-CCCCCCCCCCHHH
Confidence 44555 77 999999999997 778999999999999999998 99999999999998 8889999999999
Q ss_pred HHHHcC-CHHHHHHHHHhcCCCccccCCCCCcHHHHHH--HhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCC
Q 006942 112 DAALYG-HKDTFHYLLEVTHGVDIYSGKDGANVLSFLI--AANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAF 188 (624)
Q Consensus 112 ~Aa~~g-~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~--~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~ 188 (624)
+|+..| +.+++++|++.+++.+. ++..|.||||+|+ ..++.++++.|++.+.++ +..|..|.||||+|+..+..
T Consensus 89 ~A~~~~~~~~iv~lLl~~ga~in~-~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~-~~~d~~g~tpL~~a~~~~~~- 165 (471)
T PHA03095 89 LYLYNATTLDVIKLLIKAGADVNA-KDKVGRTPLHVYLSGFNINPKVIRLLLRKGADV-NALDLYGMTPLAVLLKSRNA- 165 (471)
T ss_pred HHHHcCCcHHHHHHHHHcCCCCCC-CCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCC-
Confidence 999999 59999999999999988 8999999999999 556789999999998875 67899999999999865310
Q ss_pred CCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhc
Q 006942 189 ASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNA 268 (624)
Q Consensus 189 ~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (624)
T Consensus 166 -------------------------------------------------------------------------------- 165 (471)
T PHA03095 166 -------------------------------------------------------------------------------- 165 (471)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHc--CCHHHHHHHHHccCCCceecCCCCC
Q 006942 269 XMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAIL--GIPEVVNEFIMAYDSSSNWSNQDGH 346 (624)
Q Consensus 269 ~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~--g~~~iv~~Ll~~~~~d~~~~d~~G~ 346 (624)
..++++.+.+....... .+..|.||||.|+.. ++.++++.|++. |.++...|..|+
T Consensus 166 --------------------~~~iv~~Ll~~g~~~~~-~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~-g~~~~~~d~~g~ 223 (471)
T PHA03095 166 --------------------NVELLRLLIDAGADVYA-VDDRFRSLLHHHLQSFKPRARIVRELIRA-GCDPAATDMLGN 223 (471)
T ss_pred --------------------CHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHHCCCcHHHHHHHHHc-CCCCcccCCCCC
Confidence 12222333333322222 477899999999975 789999999999 999887799999
Q ss_pred cHHHHHHHcCCh--hHHHHHhcCCccccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcC-cccc
Q 006942 347 TIFDHAVLYRRE--KVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVH-PFFR 423 (624)
Q Consensus 347 T~Lh~A~~~~~~--~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~-~~~~ 423 (624)
||||+|+..++. .+++.+++.+ ..+|.+|.+|+||||+|+..|+.+ .++.++. ....
T Consensus 224 tpLh~Aa~~~~~~~~~v~~ll~~g---~din~~d~~g~TpLh~A~~~~~~~-----------------~v~~LL~~gad~ 283 (471)
T PHA03095 224 TPLHSMATGSSCKRSLVLPLLIAG---ISINARNRYGQTPLHYAAVFNNPR-----------------ACRRLIALGADI 283 (471)
T ss_pred CHHHHHHhcCCchHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHH-----------------HHHHHHHcCCCC
Confidence 999999999875 5788888887 668899999999999999998853 2333332 2458
Q ss_pred cccCCCCCChhhhhhHH
Q 006942 424 EATNDLKQTPREVFTEE 440 (624)
Q Consensus 424 ~~~N~~G~Tp~dl~~~~ 440 (624)
+.+|.+|+||++++...
T Consensus 284 n~~~~~g~tpl~~A~~~ 300 (471)
T PHA03095 284 NAVSSDGNTPLSLMVRN 300 (471)
T ss_pred cccCCCCCCHHHHHHHh
Confidence 89999999999997653
|
|
| >PHA02878 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=303.22 Aligned_cols=263 Identities=12% Similarity=0.106 Sum_probs=207.8
Q ss_pred CCHHHHHHHHHc---CccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHH
Q 006942 5 NDWQGVEDFVTN---HPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAA 81 (624)
Q Consensus 5 G~~~~v~~ll~~---~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~ 81 (624)
.+.+.+.+.++. .+...+.. +..+ .||||.||+ .| +.++|+.|++.| ++++.+|.+|.||||+||.
T Consensus 11 ~~~~~i~~~i~~~~~~~~~~~~~-~~~~-~tPLh~A~~----~g---~~e~vk~Ll~~g--advn~~d~~g~TpLh~A~~ 79 (477)
T PHA02878 11 DNYETILKYIEYIDHTENYSTSA-SLIP-FIPLHQAVE----AR---NLDVVKSLLTRG--HNVNQPDHRDLTPLHIICK 79 (477)
T ss_pred ccHHHHHHHHHHHhhhhhhcCcc-cccC-cchHHHHHH----cC---CHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHH
Confidence 344445555554 22222222 5578 999999999 99 999999999997 7889999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHH---------------------------------HHHHh
Q 006942 82 KGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFH---------------------------------YLLEV 128 (624)
Q Consensus 82 ~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~---------------------------------~Ll~~ 128 (624)
.|+.++++.|++.... ... ..+.+|++.|+..|+.++++ +|++.
T Consensus 80 ~g~~~~v~~Ll~~~~~-~~~--~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~ 156 (477)
T PHA02878 80 EPNKLGMKEMIRSINK-CSV--FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSY 156 (477)
T ss_pred CccHhHHHHHHHHHhc-ccc--ccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHc
Confidence 9999999999998654 112 56789999999988766554 44555
Q ss_pred cCCCccccCCC-CCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccc
Q 006942 129 THGVDIYSGKD-GANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPV 207 (624)
Q Consensus 129 ~~~~~~~~~~~-G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~ 207 (624)
|++.+. .+.+ |.||||+|+..|+.++++.|++.+.++ +..|..|.||||.|++.++
T Consensus 157 gadin~-~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~--------------------- 213 (477)
T PHA02878 157 GADINM-KDRHKGNTALHYATENKDQRLTELLLSYGANV-NIPDKTNNSPLHHAVKHYN--------------------- 213 (477)
T ss_pred CCCCCc-cCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCC---------------------
Confidence 555555 6677 999999999999999999999988775 6788999999999997642
Q ss_pred cccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhh
Q 006942 208 EKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHM 287 (624)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 287 (624)
.
T Consensus 214 -------------------------------------------------------------------------------~ 214 (477)
T PHA02878 214 -------------------------------------------------------------------------------K 214 (477)
T ss_pred -------------------------------------------------------------------------------H
Confidence 1
Q ss_pred hHHHHHHHHHhhcccccccCCccccHHHHHHHHc-CCHHHHHHHHHccCCCceec-CCCCCcHHHHHHHcCChhHHHHHh
Q 006942 288 RTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAIL-GIPEVVNEFIMAYDSSSNWS-NQDGHTIFDHAVLYRREKVFNLIQ 365 (624)
Q Consensus 288 ~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~-g~~~iv~~Ll~~~~~d~~~~-d~~G~T~Lh~A~~~~~~~iv~~Ll 365 (624)
..+++ +.+.....+ ..+..|.||||+|+.. ++.++++.|+++ |+++... +..|+||||+| .++.+++++|+
T Consensus 215 ~iv~~---Ll~~ga~in-~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~-gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll 287 (477)
T PHA02878 215 PIVHI---LLENGASTD-ARDKCGNTPLHISVGYCKDYDILKLLLEH-GVDVNAKSYILGLTALHSS--IKSERKLKLLL 287 (477)
T ss_pred HHHHH---HHHcCCCCC-CCCCCCCCHHHHHHHhcCCHHHHHHHHHc-CCCCCccCCCCCCCHHHHH--ccCHHHHHHHH
Confidence 12222 222222112 2678899999999976 799999999999 9999887 56899999999 56789999999
Q ss_pred cCCccccccccccCCCCchhhhhhhcCC
Q 006942 366 GVNFTTFLFSSRDKAGNNILHLAGRLVP 393 (624)
Q Consensus 366 ~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 393 (624)
+.| .++|.+|.+|+||||+|++.+.
T Consensus 288 ~~g---adin~~d~~g~TpL~~A~~~~~ 312 (477)
T PHA02878 288 EYG---ADINSLNSYKLTPLSSAVKQYL 312 (477)
T ss_pred HCC---CCCCCcCCCCCCHHHHHHHHcC
Confidence 999 6678999999999999998543
|
|
| >PHA02716 CPXV016; CPX019; EVM010; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=306.43 Aligned_cols=287 Identities=12% Similarity=0.080 Sum_probs=213.0
Q ss_pred CCCchHHHHH-----HhhhhhcCCcchHHHHHHHHHccCchhhccC-CCCCChHHHHHHH--cCCHHHHHHHHhcCCCCc
Q 006942 28 PGSMTIFHMI-----VELLIDAESDEAICLLDKLASKVDPETLARQ-DNHGHTAATLSAA--KGNLRALKLLVKYNPDLT 99 (624)
Q Consensus 28 ~g~~T~Lh~A-----a~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~-d~~G~TpLh~Aa~--~g~~~iv~~Ll~~~~~l~ 99 (624)
.+ ..+++.. .+ .+ +.++|++|++.| ..+++.+ |..|.||||.|+. .++.+++++|++++++ +
T Consensus 136 ~d-~~~~~~y~~al~~~----~v---~leiVk~LLe~G-~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GAD-V 205 (764)
T PHA02716 136 GD-MDILYTYFNSPNTR----GI---DLDLIKYMVDVG-IVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVN-V 205 (764)
T ss_pred cc-chHHHHHHhhhccc----CC---CHHHHHHHHHCC-CCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCC-C
Confidence 35 5666665 23 56 999999999996 3678888 8999999999874 4689999999999998 8
Q ss_pred ccCCCCCChHHHHHHHcCC--HHHHHHHHHhcCCCccccCCCCCcHHHHHH-----------------------------
Q 006942 100 NIRHGEGFLPVHDAALYGH--KDTFHYLLEVTHGVDIYSGKDGANVLSFLI----------------------------- 148 (624)
Q Consensus 100 ~~~n~~G~TPLh~Aa~~g~--~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~----------------------------- 148 (624)
+.+|..|.||||+|+..|+ .++|++|++.|++++. ++..|+||||.|+
T Consensus 206 N~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~-kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~ 284 (764)
T PHA02716 206 NLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDM-KCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMI 284 (764)
T ss_pred CCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhh
Confidence 8999999999999999996 5999999999999998 8999999999763
Q ss_pred --------HhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCC
Q 006942 149 --------AANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDY 220 (624)
Q Consensus 149 --------~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~ 220 (624)
..|+.++++.|++.+.++ +.+|.+|+||||+|+..+.
T Consensus 285 L~~~i~AA~~g~leiVklLLe~GAdI-N~kD~~G~TPLH~Aaa~~~---------------------------------- 329 (764)
T PHA02716 285 LHSYITLARNIDISVVYSFLQPGVKL-HYKDSAGRTCLHQYILRHN---------------------------------- 329 (764)
T ss_pred hHHHHHHHHcCCHHHHHHHHhCCCce-eccCCCCCCHHHHHHHHhC----------------------------------
Confidence 346677778888777664 5678888888887764311
Q ss_pred CCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhc
Q 006942 221 HDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGV 300 (624)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~ 300 (624)
++.+.+++|. +..
T Consensus 330 ----------------------------------------------------------------~~~eIVklLL---e~G 342 (764)
T PHA02716 330 ----------------------------------------------------------------ISTDIIKLLH---EYG 342 (764)
T ss_pred ----------------------------------------------------------------CCchHHHHHH---HcC
Confidence 1111233332 222
Q ss_pred ccccccCCccccHHHHHHHH--------------cCCHHHHHHHHHccCCCceecCCCCCcHHHH----HHHcCChhHHH
Q 006942 301 VWTNFQNSAQLSVAMLAAAI--------------LGIPEVVNEFIMAYDSSSNWSNQDGHTIFDH----AVLYRREKVFN 362 (624)
Q Consensus 301 ~~~~~~~~~~g~tpLh~Aa~--------------~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~----A~~~~~~~iv~ 362 (624)
.+.+ ..+..|.||||+|+. .|+.++++.|+++ |+++...|..|+||||. |...++.++++
T Consensus 343 ADIN-~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~-GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvk 420 (764)
T PHA02716 343 NDLN-EPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISL-GADITAVNCLGYTPLTSYICTAQNYMYYDIID 420 (764)
T ss_pred CCCc-cCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHC-CCCCCCcCCCCCChHHHHHHHHHhcChHHHHH
Confidence 2112 367788999998875 3688999999998 88887779999999994 23346778888
Q ss_pred HHhcCCc----------------------------------------------------------cccccccccCCCCch
Q 006942 363 LIQGVNF----------------------------------------------------------TTFLFSSRDKAGNNI 384 (624)
Q Consensus 363 ~Ll~~~~----------------------------------------------------------~~~~vn~~D~~GnTp 384 (624)
+|++.+. ....+|.+|..|+||
T Consensus 421 lLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TP 500 (764)
T PHA02716 421 CLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTP 500 (764)
T ss_pred HHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCH
Confidence 8876420 001246678999999
Q ss_pred hhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcCc-ccccccCCCCCChhhhhhHHH
Q 006942 385 LHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVHP-FFREATNDLKQTPREVFTEEH 441 (624)
Q Consensus 385 LHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~~-~~~~~~N~~G~Tp~dl~~~~~ 441 (624)
||+|+..|+...+ ..+.++-++.. ..++.+|++|+||++++.++.
T Consensus 501 Lh~Aa~~g~~~~v------------~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g 546 (764)
T PHA02716 501 LHVSIISHTNANI------------VMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNN 546 (764)
T ss_pred HHHHHHcCCccch------------hHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcC
Confidence 9999998875421 00122333333 458999999999999987644
|
|
| >PHA02875 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=292.44 Aligned_cols=246 Identities=13% Similarity=0.073 Sum_probs=208.7
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPV 110 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPL 110 (624)
+++||.|++ .| +.++++.|++.| .+++.++.+|.||||+|+..|+.+++++|++.+++ ++..+.+|.|||
T Consensus 3 ~~~L~~A~~----~g---~~~iv~~Ll~~g--~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~t~L 72 (413)
T PHA02875 3 QVALCDAIL----FG---ELDIARRLLDIG--INPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAI-PDVKYPDIESEL 72 (413)
T ss_pred chHHHHHHH----hC---CHHHHHHHHHCC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCcccHH
Confidence 799999999 99 999999999997 67788899999999999999999999999999887 677888999999
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCC
Q 006942 111 HDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFAS 190 (624)
Q Consensus 111 h~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~ 190 (624)
|.|+..|+.+++++|++.++......+.+|.||||+|+..|+.++++.|++.+.+. +.++..|.||||+|+..++
T Consensus 73 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~-~~~~~~g~tpLh~A~~~~~---- 147 (413)
T PHA02875 73 HDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADP-DIPNTDKFSPLHLAVMMGD---- 147 (413)
T ss_pred HHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcCC----
Confidence 99999999999999999987665436778999999999999999999999998775 6678899999999997742
Q ss_pred CCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccC
Q 006942 191 GSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXM 270 (624)
Q Consensus 191 ~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (624)
..
T Consensus 148 ---~~--------------------------------------------------------------------------- 149 (413)
T PHA02875 148 ---IK--------------------------------------------------------------------------- 149 (413)
T ss_pred ---HH---------------------------------------------------------------------------
Confidence 11
Q ss_pred CCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCC-CcHH
Q 006942 271 HLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDG-HTIF 349 (624)
Q Consensus 271 ~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G-~T~L 349 (624)
.+++| .+.....+ ..+..|.||||+|+..|+.++++.|++. |+++...+..| .||+
T Consensus 150 ------------------~v~~L---l~~g~~~~-~~d~~g~TpL~~A~~~g~~eiv~~Ll~~-ga~~n~~~~~~~~t~l 206 (413)
T PHA02875 150 ------------------GIELL---IDHKACLD-IEDCCGCTPLIIAMAKGDIAICKMLLDS-GANIDYFGKNGCVAAL 206 (413)
T ss_pred ------------------HHHHH---HhcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCcCCCCCCchHH
Confidence 22222 22222112 2677899999999999999999999999 99998775555 6899
Q ss_pred HHHHHcCChhHHHHHhcCC-ccccccccccCCCCchhhhhhhcCC
Q 006942 350 DHAVLYRREKVFNLIQGVN-FTTFLFSSRDKAGNNILHLAGRLVP 393 (624)
Q Consensus 350 h~A~~~~~~~iv~~Ll~~~-~~~~~vn~~D~~GnTpLHlAa~~~~ 393 (624)
|+|+.+++.+++++|+++| +.+ .++..|.+|.|||++++....
T Consensus 207 ~~A~~~~~~~iv~~Ll~~gad~n-~~~~~~~~~~t~l~~~~~~~~ 250 (413)
T PHA02875 207 CYAIENNKIDIVRLFIKRGADCN-IMFMIEGEECTILDMICNMCT 250 (413)
T ss_pred HHHHHcCCHHHHHHHHHCCcCcc-hHhhcCCCchHHHHHHHhhcC
Confidence 9999999999999999999 443 234568899999999886543
|
|
| >PHA02917 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=298.65 Aligned_cols=383 Identities=10% Similarity=-0.020 Sum_probs=231.3
Q ss_pred HHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCC--
Q 006942 7 WQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGN-- 84 (624)
Q Consensus 7 ~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~-- 84 (624)
++.+++++. +...++.+ |.+| +||||+||. +...| +.++|+.|++.| ++++.+|..|.||||+|+..|+
T Consensus 12 ~~~~~~l~~-~~~~~~~~-d~~g-~t~Lh~a~~-~~~~~---~~~~v~~Ll~~g--a~v~~~~~~g~TpL~~Aa~~g~~~ 82 (661)
T PHA02917 12 LDELKQMLR-DRDPNDTR-NQFK-NNALHAYLF-NEHCN---NVEVVKLLLDSG--TNPLHKNWRQLTPLEEYTNSRHVK 82 (661)
T ss_pred HHHHHHHHh-ccCccccc-CCCC-CcHHHHHHH-hhhcC---cHHHHHHHHHCC--CCccccCCCCCCHHHHHHHcCChh
Confidence 567888886 44555665 9999 999999866 00037 899999999997 6778899999999998887554
Q ss_pred ---------------------------------HHHHHHHHhcCCCCcccCCCCCChHHHHHH--HcCCHHHHHHHHHhc
Q 006942 85 ---------------------------------LRALKLLVKYNPDLTNIRHGEGFLPVHDAA--LYGHKDTFHYLLEVT 129 (624)
Q Consensus 85 ---------------------------------~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa--~~g~~~iv~~Ll~~~ 129 (624)
.++|++|++++++ ++.+|.+|.||||.|+ ..|+.+++++|+++|
T Consensus 83 v~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gad-in~~d~~g~T~L~~~~a~~~~~~eivklLi~~G 161 (661)
T PHA02917 83 VNKDIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFD-LSVKCENHRSVIENYVMTDDPVPEIIDLFIENG 161 (661)
T ss_pred HHHHHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCC-CCccCCCCccHHHHHHHccCCCHHHHHHHHHcC
Confidence 4566667777776 7788999999999654 578999999999999
Q ss_pred CCCccc--cCCCC-----------CcHHHHHHH-----------hCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCC
Q 006942 130 HGVDIY--SGKDG-----------ANVLSFLIA-----------ANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185 (624)
Q Consensus 130 ~~~~~~--~~~~G-----------~t~Lh~A~~-----------~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~ 185 (624)
++++.. .+..| .||||+|+. +++.++++.|++.+.++ +.+|.+|.||||+|+..+
T Consensus 162 a~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadv-n~~d~~G~TpLh~A~~~g 240 (661)
T PHA02917 162 CSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKP-SSIDKNYCTALQYYIKSS 240 (661)
T ss_pred CCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCc-ccCCCCCCcHHHHHHHcC
Confidence 987641 23334 599999986 46889999999998876 678999999999999886
Q ss_pred CCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchh---h--------hhhhcccCcccccCCCCcchhhhh
Q 006942 186 YAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIES---F--------IVTSKIHSKESTRFGSTQQITTTF 254 (624)
Q Consensus 186 ~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~~~~~~~~ 254 (624)
+. ....++.++..+ .+.. .....+ ..+....-+.. . ..+..+. +...+.+.++. .++
T Consensus 241 ~~-----~~eivk~Li~g~-d~~~--~~~~~~-~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~--Li~~Ga~~~~~-~~~ 308 (661)
T PHA02917 241 HI-----DIDIVKLLMKGI-DNTA--YSYIDD-LTCCTRGIMADYLNSDYRYNKDVDLDLVKL--FLENGKPHGIM-CSI 308 (661)
T ss_pred CC-----cHHHHHHHHhCC-cccc--cccccC-cccccchHHHHHHHhhccccccchHHHHHH--HHhCCCCCcee-Eee
Confidence 31 123444443311 1100 000000 00000000000 0 0000000 00000000000 000
Q ss_pred hhhhHHHHHHhhhcc-CCCCCCccchHhh--hhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHH
Q 006942 255 GAMLHKLHRMLWNAX-MHLSPGIKGIHDQ--KLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFI 331 (624)
Q Consensus 255 ~~~~~~~~~~~~~~~-~~~~~~i~~i~~~--~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll 331 (624)
......+.++..... ..+..-+.+.+.. ..+. ...++++.+.+.+++.+. .+..|.++. ...+.++++.||
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~v~~Ll~~GAdvn~-~~~~g~~~~----~~~~~~~i~~LL 382 (661)
T PHA02917 309 VPLWRNDKETISLILKTMNSDVLQHILIEYMTFGD-IDIPLVECMLEYGAVVNK-EAIHGYFRN----INIDSYTMKYLL 382 (661)
T ss_pred ecccccchHHHHHHHHHhchHHHHHHHHHHHHcCC-CcHHHHHHHHHcCCCCCC-CCccccchh----hcCCHHHHHHHH
Confidence 000000000000000 0000000000010 1111 123455555555543232 456666643 466778888888
Q ss_pred H-ccCCCceecCCCCCcHHHHHHHcCC-----------------------hhHHHHHhcCCccccccccccCCCCchhhh
Q 006942 332 M-AYDSSSNWSNQDGHTIFDHAVLYRR-----------------------EKVFNLIQGVNFTTFLFSSRDKAGNNILHL 387 (624)
Q Consensus 332 ~-~~~~d~~~~d~~G~T~Lh~A~~~~~-----------------------~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHl 387 (624)
. . |++.+..|.+|+||||.|++.+. .+++++|+.+| .++|.+|..|+||||+
T Consensus 383 ~~~-ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~G---AdIN~kd~~G~TpLh~ 458 (661)
T PHA02917 383 KKE-GGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYL---KDINMIDKRGETLLHK 458 (661)
T ss_pred Hhc-CCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCC---CCCCCCCCCCcCHHHH
Confidence 6 5 67777776679999999875432 45778899988 6678999999999999
Q ss_pred hhhcCCCCCccchHHHhHHHHhHHHHHHhhcCc-ccccccCCCCCChhhhhhH
Q 006942 388 AGRLVPSSEVAGAALQMQRELQWFKAIENLVHP-FFREATNDLKQTPREVFTE 439 (624)
Q Consensus 388 Aa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~~-~~~~~~N~~G~Tp~dl~~~ 439 (624)
|+..++.+ .++.++.. .+.+.+|..|+||+.++..
T Consensus 459 Aa~~~~~~-----------------~v~~Ll~~GAdin~~d~~G~T~L~~A~~ 494 (661)
T PHA02917 459 AVRYNKQS-----------------LVSLLLESGSDVNIRSNNGYTCIAIAIN 494 (661)
T ss_pred HHHcCCHH-----------------HHHHHHHCcCCCCCCCCCCCCHHHHHHH
Confidence 99887632 22233322 4578889999999998864
|
|
| >PHA02730 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-32 Score=289.71 Aligned_cols=380 Identities=12% Similarity=0.058 Sum_probs=208.3
Q ss_pred HHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHH--cCC
Q 006942 7 WQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAA--KGN 84 (624)
Q Consensus 7 ~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~--~g~ 84 (624)
.+.|+.|++ ++.+++.+ |..| +||||+|+. .| ..+.|+|++|++.+..++.+..+..+++|||.++. +++
T Consensus 57 ~eivklLLs-~GAdin~k-D~~G-~TPLh~Aa~----~~-~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~ 128 (672)
T PHA02730 57 IKIVRLLLS-RGVERLCR-NNEG-LTPLGVYSK----RK-YVKSQIVHLLISSYSNASNELTSNINDFDLYSYMSSDNID 128 (672)
T ss_pred HHHHHHHHh-CCCCCccc-CCCC-CChHHHHHH----cC-CCcHHHHHHHHhcCCCCCcccccccCCchHHHHHHhcCCc
Confidence 555555543 33344454 5555 666665555 43 00255666666655444445555555556655555 555
Q ss_pred HHHHHHHHhc-CCCCcccCC-----CCCChHHHHHHHcCCHHHHHHHHHhcCCCc-------cccCCCCCcHHHHHH---
Q 006942 85 LRALKLLVKY-NPDLTNIRH-----GEGFLPVHDAALYGHKDTFHYLLEVTHGVD-------IYSGKDGANVLSFLI--- 148 (624)
Q Consensus 85 ~~iv~~Ll~~-~~~l~~~~n-----~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~-------~~~~~~G~t~Lh~A~--- 148 (624)
.++|++|++. +.+ ++..+ ..|.+|+++|...++.|+|++|+++|+++. ...+.-+.|.||+.+
T Consensus 129 ~~~vk~Li~~~~~~-~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~ 207 (672)
T PHA02730 129 LRLLKYLIVDKRIR-PSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSH 207 (672)
T ss_pred HHHHHHHHHhcCCC-hhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhh
Confidence 5666666642 112 11221 267788888888888888888888887763 112333345566444
Q ss_pred ---HhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhh---ccccccccccCCcccCCCCC
Q 006942 149 ---AANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIY---NCIPVEKELVPSIQTNDYHD 222 (624)
Q Consensus 149 ---~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~---~~~~~~~~~~~~~~~~~~~~ 222 (624)
.+++.|+++.|+.++.++ +.+|.+|.||||++.... ..+...++.++. .|.. ..|
T Consensus 208 ~~~~~n~~eiv~lLIs~GadI-N~kd~~G~TpLh~~~~~~-----~~~~eiv~~Li~~~~~~~~-------------~~~ 268 (672)
T PHA02730 208 RESESLSKDVIKCLIDNNVSI-HGRDEGGSLPIQYYWSCS-----TIDIEIVKLLIKDVDTCSV-------------YDD 268 (672)
T ss_pred hhhhccCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcC-----cccHHHHHHHHhccccccc-------------ccc
Confidence 345678888888888765 678999999999643321 112445555554 1110 000
Q ss_pred CCCcchhhhhhhcccCcccccCCCCcchhhhhhhhh----------H---------HHHHH----hhhccCCCCCCccch
Q 006942 223 LDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAML----------H---------KLHRM----LWNAXMHLSPGIKGI 279 (624)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~---------~~~~~----~~~~~~~~~~~i~~i 279 (624)
....+ ....+..+++...+..+..-......+++ . .+... ...........+.++
T Consensus 269 ~~~~~--~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~ 346 (672)
T PHA02730 269 ISQPY--IRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAM 346 (672)
T ss_pred ccchh--hhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHH
Confidence 00000 00000111111111110000000000000 0 00000 000000011122223
Q ss_pred Hhhhhhhh--hHHHHHHHHHhhcccccccCCccccHHHHHHHHcCC----HHHHHHHHHccCCC--ceecCCCCCcHHHH
Q 006942 280 HDQKLTHM--RTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGI----PEVVNEFIMAYDSS--SNWSNQDGHTIFDH 351 (624)
Q Consensus 280 ~~~~~~~~--~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~----~~iv~~Ll~~~~~d--~~~~d~~G~T~Lh~ 351 (624)
......+. ...++++.+.+.+++.+ .+..|.||||+|+..++ .++++.|+++ |++ .+..|..|+||||.
T Consensus 347 l~~Y~~~~~~v~ieIvelLIs~GAdIN--~k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~-Ga~~dIN~kd~~G~T~Lh~ 423 (672)
T PHA02730 347 LINYLHYGDMVSIPILRCMLDNGATMD--KTTDNNYPLHDYFVNNNNIVDVNVVRFIVEN-NGHMAINHVSNNGRLCMYG 423 (672)
T ss_pred HHHHHhcCCcCcHHHHHHHHHCCCCCC--cCCCCCcHHHHHHHHcCCcchHHHHHHHHHc-CCCccccccccCCCchHhH
Confidence 32222222 34566666666665323 34788999999999885 8999999999 874 44448999999994
Q ss_pred ---HHHcC---------ChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcC
Q 006942 352 ---AVLYR---------REKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVH 419 (624)
Q Consensus 352 ---A~~~~---------~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~ 419 (624)
|...+ ..+++++|+.++ +++|++|+.|+||||+|+..++.+ .++-++.
T Consensus 424 ~i~a~~~n~~~~~~e~~~~~ivk~LIs~G---ADINakD~~G~TPLh~Aa~~~~~e-----------------ive~LI~ 483 (672)
T PHA02730 424 LILSRFNNCGYHCYETILIDVFDILSKYM---DDIDMIDNENKTLLYYAVDVNNIQ-----------------FARRLLE 483 (672)
T ss_pred HHHHHhccccccccchhHHHHHHHHHhcc---cchhccCCCCCCHHHHHHHhCCHH-----------------HHHHHHH
Confidence 33332 235699999999 678899999999999999988743 2333332
Q ss_pred c-ccccccCC-CCCChhhhhhH
Q 006942 420 P-FFREATND-LKQTPREVFTE 439 (624)
Q Consensus 420 ~-~~~~~~N~-~G~Tp~dl~~~ 439 (624)
. ...+.+|+ .|.||++.+..
T Consensus 484 ~GAdIN~~d~~~g~TaL~~Aa~ 505 (672)
T PHA02730 484 YGASVNTTSRSIINTAIQKSSY 505 (672)
T ss_pred CCCCCCCCCCcCCcCHHHHHHH
Confidence 2 35788886 59999998754
|
|
| >PHA03100 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=297.07 Aligned_cols=250 Identities=17% Similarity=0.149 Sum_probs=217.2
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHH-----HHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHM-----IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTA 75 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~-----Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~Tp 75 (624)
|+..|+.+.|+.+++.+. .++.. +..| .||||+ |+. .| +.++++.|++.| ++++..|..|.||
T Consensus 42 A~~~~~~~ivk~Ll~~g~-~~~~~-~~~~-~t~L~~~~~~~a~~----~~---~~~iv~~Ll~~g--a~i~~~d~~g~tp 109 (480)
T PHA03100 42 AKEARNIDVVKILLDNGA-DINSS-TKNN-STPLHYLSNIKYNL----TD---VKEIVKLLLEYG--ANVNAPDNNGITP 109 (480)
T ss_pred hhccCCHHHHHHHHHcCC-CCCCc-cccC-cCHHHHHHHHHHHh----hc---hHHHHHHHHHCC--CCCCCCCCCCCch
Confidence 788999999999998754 44555 7788 999999 999 99 999999999998 6679999999999
Q ss_pred HHHHH--HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcC--CHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Q 006942 76 ATLSA--AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYG--HKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAAN 151 (624)
Q Consensus 76 Lh~Aa--~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g--~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~ 151 (624)
||+|+ ..|+.+++++|++++++ ++..|..|.||||+|+..| +.+++++|++++++.+. ++..|.||||+|+..|
T Consensus 110 L~~A~~~~~~~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~-~d~~g~tpL~~A~~~~ 187 (480)
T PHA03100 110 LLYAISKKSNSYSIVEYLLDNGAN-VNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINA-KNRYGYTPLHIAVEKG 187 (480)
T ss_pred hhHHHhcccChHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccc-ccCCCCCHHHHHHHhC
Confidence 99999 99999999999999998 7889999999999999999 99999999999999888 8889999999999999
Q ss_pred cHHHHHHHHHhCCCCCcccCCCC------CCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCC
Q 006942 152 LYDVALDLLKRHPTIGRDSIDSR------RIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDG 225 (624)
Q Consensus 152 ~~~~v~~Ll~~~~~l~~~~d~~G------~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 225 (624)
+.++++.|++.+.+. ...+..| .||||.|+..++.
T Consensus 188 ~~~iv~~Ll~~ga~~-~~~~~~~~~~~~~~t~l~~a~~~~~~-------------------------------------- 228 (480)
T PHA03100 188 NIDVIKFLLDNGADI-NAGDIETLLFTIFETPLHIAACYNEI-------------------------------------- 228 (480)
T ss_pred CHHHHHHHHHcCCCc-cCCCCCCCcHHHHHhHHHHHHHhCcC--------------------------------------
Confidence 999999999998775 4567777 8999999876420
Q ss_pred cchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccc
Q 006942 226 DIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNF 305 (624)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~ 305 (624)
..++++.+.+...+.+
T Consensus 229 ---------------------------------------------------------------~~~iv~~Ll~~g~din- 244 (480)
T PHA03100 229 ---------------------------------------------------------------TLEVVNYLLSYGVPIN- 244 (480)
T ss_pred ---------------------------------------------------------------cHHHHHHHHHcCCCCC-
Confidence 1222233333322112
Q ss_pred cCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 306 QNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 306 ~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
..+..|.||||+|+..|+.++++.|++. |+++...|..|+||||+|+.+++.+++++|++.+
T Consensus 245 ~~d~~g~TpL~~A~~~~~~~iv~~Ll~~-gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g 306 (480)
T PHA03100 245 IKDVYGFTPLHYAVYNNNPEFVKYLLDL-GANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNG 306 (480)
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcC
Confidence 2678899999999999999999999999 9988766999999999999999999999999998
|
|
| >KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-33 Score=241.09 Aligned_cols=207 Identities=21% Similarity=0.255 Sum_probs=170.6
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCC-CCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDN-HGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLP 109 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~-~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TP 109 (624)
.++.+.+|+ .. ...-|+.|++.. +..++.+|. +|+||||.||..|+.++|++|+....-.++.+|..|.||
T Consensus 4 ~~~~~~~~~----~~---~~~kveel~~s~-~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtP 75 (226)
T KOG4412|consen 4 ASLGKAICE----NC---EEFKVEELIQSD-PKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTP 75 (226)
T ss_pred cchHHHHHh----hc---hHHHHHHHHhcC-hhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCch
Confidence 678888888 77 788888888875 555666665 899999999999999999999964322366778889999
Q ss_pred HHHHHHcCCHHHHHHHHHh-cCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCC
Q 006942 110 VHDAALYGHKDTFHYLLEV-THGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAF 188 (624)
Q Consensus 110 Lh~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~ 188 (624)
||+||..|+.|+|+.|+.+ +++++. .+..|.|+||+|+..|+++++.+|++.+.. ++.
T Consensus 76 lhia~s~g~~evVk~Ll~r~~advna-~tn~G~T~LHyAagK~r~eIaqlLle~ga~-i~~------------------- 134 (226)
T KOG4412|consen 76 LHIAASNGNDEVVKELLNRSGADVNA-TTNGGQTCLHYAAGKGRLEIAQLLLEKGAL-IRI------------------- 134 (226)
T ss_pred hhhhhhcCcHHHHHHHhcCCCCCcce-ecCCCcceehhhhcCChhhHHHHHHhcCCC-Ccc-------------------
Confidence 9999999999999999988 777777 889999999999999999999999987632 233
Q ss_pred CCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhc
Q 006942 189 ASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNA 268 (624)
Q Consensus 189 ~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (624)
T Consensus 135 -------------------------------------------------------------------------------- 134 (226)
T KOG4412|consen 135 -------------------------------------------------------------------------------- 134 (226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcH
Q 006942 269 XMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTI 348 (624)
Q Consensus 269 ~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~ 348 (624)
+|..|.||||-||..|+++++++|+.. ++..+.+|+.|+||
T Consensus 135 --------------------------------------kD~~~qtplHRAAavGklkvie~Li~~-~a~~n~qDk~G~Tp 175 (226)
T KOG4412|consen 135 --------------------------------------KDKQGQTPLHRAAAVGKLKVIEYLISQ-GAPLNTQDKYGFTP 175 (226)
T ss_pred --------------------------------------cccccCchhHHHHhccchhhHHHHHhc-CCCCCcccccCccH
Confidence 444556666667777888999999998 87777779999999
Q ss_pred HHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhh
Q 006942 349 FDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAG 389 (624)
Q Consensus 349 Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa 389 (624)
||.|.-.++.++..+|++.+ ..+...|++| ||+-.|+
T Consensus 176 L~~al~e~~~d~a~lLV~~g---Ad~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 176 LHHALAEGHPDVAVLLVRAG---ADTDREDKEG-TALRIAC 212 (226)
T ss_pred HHHHHhccCchHHHHHHHhc---cceeeccccC-chHHHHH
Confidence 99998888999999999999 4455999988 9988776
|
|
| >PHA02989 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-32 Score=293.36 Aligned_cols=274 Identities=15% Similarity=0.119 Sum_probs=213.8
Q ss_pred cCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHc
Q 006942 3 EKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAK 82 (624)
Q Consensus 3 ~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~ 82 (624)
.+.+.+.|+.|++.+. +++.+ .+| .||||.++. .+ +.+.++|+.|++.| +++|.++ .|.||||.|+.+
T Consensus 12 ~~~~~~~v~~LL~~Ga-dvN~~--~~g-~t~l~~~~~----~~-~~~~~iv~~Ll~~G--Advn~~~-~~~tpL~~a~~~ 79 (494)
T PHA02989 12 DTVDKNALEFLLRTGF-DVNEE--YRG-NSILLLYLK----RK-DVKIKIVKLLIDNG--ADVNYKG-YIETPLCAVLRN 79 (494)
T ss_pred CcCcHHHHHHHHHcCC-Ccccc--cCC-CCHHHHHHh----cC-CCChHHHHHHHHcC--CCccCCC-CCCCcHHHHHhc
Confidence 4678999999987754 45555 457 899987665 43 11689999999998 6777776 579999999875
Q ss_pred C------CHHHHHHHHhcCCCCcccCCCCCChHHHHHHHc---CCHHHHHHHHHhcCCC-ccccCCCCCcHHHHHHHh--
Q 006942 83 G------NLRALKLLVKYNPDLTNIRHGEGFLPVHDAALY---GHKDTFHYLLEVTHGV-DIYSGKDGANVLSFLIAA-- 150 (624)
Q Consensus 83 g------~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~---g~~~iv~~Ll~~~~~~-~~~~~~~G~t~Lh~A~~~-- 150 (624)
+ +.++|++|+++|++ ++.+|..|.||||.|+.. |+.+++++|+++|+++ +. ++..|.||||+|+..
T Consensus 80 ~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~-~d~~g~tpLh~a~~~~~ 157 (494)
T PHA02989 80 REITSNKIKKIVKLLLKFGAD-INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDV-KNSRGYNLLHMYLESFS 157 (494)
T ss_pred cCcchhhHHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccc-cCCCCCCHHHHHHHhcc
Confidence 4 57899999999999 889999999999998865 6799999999999999 66 899999999998865
Q ss_pred CcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhh
Q 006942 151 NLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESF 230 (624)
Q Consensus 151 ~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (624)
++.++++.|++.+.++....+..|.||||.|++.+.. .
T Consensus 158 ~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~---~--------------------------------------- 195 (494)
T PHA02989 158 VKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDID---V--------------------------------------- 195 (494)
T ss_pred CCHHHHHHHHHcCCCccccccccCCChHHHHHhcccc---c---------------------------------------
Confidence 5889999999999887555688899999999865310 0
Q ss_pred hhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCcc
Q 006942 231 IVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQ 310 (624)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~ 310 (624)
+ ..++++.+.+.+...+. .+..
T Consensus 196 ------------------------------------------------------~---~~~iv~~Ll~~Ga~vn~-~~~~ 217 (494)
T PHA02989 196 ------------------------------------------------------I---SIKVIKYLIKKGVNIET-NNNG 217 (494)
T ss_pred ------------------------------------------------------c---cHHHHHHHHhCCCCccc-cCCc
Confidence 1 12233333333331122 4556
Q ss_pred ccHHHHHHHHc------CCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCch
Q 006942 311 LSVAMLAAAIL------GIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNI 384 (624)
Q Consensus 311 g~tpLh~Aa~~------g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTp 384 (624)
+.||||.++.. +..+++++|++ +.++...|..|+||||+|+..++.+++++|++.| .++|.+|..|+||
T Consensus 218 ~~t~l~~~~~~~~~~~~~~~~il~~l~~--~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~G---adin~~d~~G~Tp 292 (494)
T PHA02989 218 SESVLESFLDNNKILSKKEFKVLNFILK--YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLG---DDIYNVSKDGDTV 292 (494)
T ss_pred cccHHHHHHHhchhhcccchHHHHHHHh--CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcC---CCccccCCCCCCH
Confidence 78999887654 34677776654 5777666899999999999999999999999988 6677999999999
Q ss_pred hhhhhhcCCCC
Q 006942 385 LHLAGRLVPSS 395 (624)
Q Consensus 385 LHlAa~~~~~~ 395 (624)
||+|++.++.+
T Consensus 293 L~~A~~~~~~~ 303 (494)
T PHA02989 293 LTYAIKHGNID 303 (494)
T ss_pred HHHHHHcCCHH
Confidence 99999988854
|
|
| >KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=242.50 Aligned_cols=165 Identities=22% Similarity=0.204 Sum_probs=147.6
Q ss_pred CCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCC
Q 006942 5 NDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGN 84 (624)
Q Consensus 5 G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 84 (624)
.....++++++..|..++.+-|.+| +||||+||+ .| +.++|++|++. ....++.+|..|+||||+||..|+
T Consensus 14 ~~~~kveel~~s~~kSL~~r~dqD~-Rt~LHwa~S----~g---~~eiv~fLlsq-~nv~~ddkDdaGWtPlhia~s~g~ 84 (226)
T KOG4412|consen 14 CEEFKVEELIQSDPKSLNARDDQDG-RTPLHWACS----FG---HVEIVYFLLSQ-PNVKPDDKDDAGWTPLHIAASNGN 84 (226)
T ss_pred chHHHHHHHHhcChhhhhccccccC-Cceeeeeee----cC---chhHHHHHHhc-CCCCCCCccccCCchhhhhhhcCc
Confidence 3456788999999988877746699 999999999 99 99999999984 356688899999999999999999
Q ss_pred HHHHHHHHhc-CCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhC
Q 006942 85 LRALKLLVKY-NPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRH 163 (624)
Q Consensus 85 ~~iv~~Ll~~-~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~ 163 (624)
.|+||.|+.+ +++ ++..++.|.||||||+..|+.|++++|+++++.+.. +|+.|.||||.|+.-|...++++|+..+
T Consensus 85 ~evVk~Ll~r~~ad-vna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~-kD~~~qtplHRAAavGklkvie~Li~~~ 162 (226)
T KOG4412|consen 85 DEVVKELLNRSGAD-VNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRI-KDKQGQTPLHRAAAVGKLKVIEYLISQG 162 (226)
T ss_pred HHHHHHHhcCCCCC-cceecCCCcceehhhhcCChhhHHHHHHhcCCCCcc-cccccCchhHHHHhccchhhHHHHHhcC
Confidence 9999999999 777 889999999999999999999999999999999988 9999999999999999999999999987
Q ss_pred CCCCcccCCCCCCHHHHH
Q 006942 164 PTIGRDSIDSRRIILNTL 181 (624)
Q Consensus 164 ~~l~~~~d~~G~TpLh~A 181 (624)
..+ +.+|+.|+||||+|
T Consensus 163 a~~-n~qDk~G~TpL~~a 179 (226)
T KOG4412|consen 163 APL-NTQDKYGFTPLHHA 179 (226)
T ss_pred CCC-CcccccCccHHHHH
Confidence 543 56677777777765
|
|
| >PHA02791 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-32 Score=266.56 Aligned_cols=220 Identities=15% Similarity=0.049 Sum_probs=184.9
Q ss_pred hHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHh
Q 006942 49 AICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128 (624)
Q Consensus 49 ~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~ 128 (624)
+.+++++|++++. +.+|.+|.||||+|+..|+.++++.|++.+++ ++.. +|.||||+|+..|+.+++++|++.
T Consensus 11 ~~~~~~~Lis~~a----~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~-~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~ 83 (284)
T PHA02791 11 SKQLKSFLSSKDA----FKADVHGHSALYYAIADNNVRLVCTLLNAGAL-KNLL--ENEFPLHQAATLEDTKIVKILLFS 83 (284)
T ss_pred HHHHHHHHHhCCC----CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCC-CcCC--CCCCHHHHHHHCCCHHHHHHHHHC
Confidence 8999999999863 46899999999999999999999999999887 4444 479999999999999999999999
Q ss_pred cCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhcccccc
Q 006942 129 THGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVE 208 (624)
Q Consensus 129 ~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~ 208 (624)
+++.+. +|..|+||||+|+..|+.++++.|++.+.++. .
T Consensus 84 Gadvn~-~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin-~--------------------------------------- 122 (284)
T PHA02791 84 GMDDSQ-FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM-F--------------------------------------- 122 (284)
T ss_pred CCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC-c---------------------------------------
Confidence 999888 89999999999999999999999998766541 1
Q ss_pred ccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhh
Q 006942 209 KELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMR 288 (624)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 288 (624)
T Consensus 123 -------------------------------------------------------------------------------- 122 (284)
T PHA02791 123 -------------------------------------------------------------------------------- 122 (284)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcccccccCCccc-cHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcC
Q 006942 289 TVEIVRIICEGVVWTNFQNSAQL-SVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGV 367 (624)
Q Consensus 289 ~~~lL~~l~~~~~~~~~~~~~~g-~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 367 (624)
.+..| .||||+|+..|+.++|++|+++ +++... ...|+||||+|+.+|+.+++++|+++
T Consensus 123 ------------------~~~~g~~TpL~~Aa~~g~~eivk~LL~~-~~~~~d-~~~g~TpLh~Aa~~g~~eiv~lLL~~ 182 (284)
T PHA02791 123 ------------------YGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPSTFD-LAILLSCIHITIKNGHVDMMILLLDY 182 (284)
T ss_pred ------------------cCCCCCcHHHHHHHHcCCHHHHHHHHhc-CCcccc-cccCccHHHHHHHcCCHHHHHHHHHC
Confidence 22233 5899999999999999999998 776431 23689999999999999999999999
Q ss_pred CccccccccccCCCCch-hhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcCc-ccccccCCCCCChhhhh
Q 006942 368 NFTTFLFSSRDKAGNNI-LHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVHP-FFREATNDLKQTPREVF 437 (624)
Q Consensus 368 ~~~~~~vn~~D~~GnTp-LHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~~-~~~~~~N~~G~Tp~dl~ 437 (624)
+ ..+|.+|..|.|| ||+|++.|+.+ .|+.++.. ...+.+|.+ .||++.+
T Consensus 183 g---Ad~n~~d~~g~t~~L~~Aa~~~~~e-----------------~v~lLl~~Ga~in~~~~~-~~~l~~~ 233 (284)
T PHA02791 183 M---TSTNTNNSLLFIPDIKLAIDNKDLE-----------------MLQALFKYDINIYSVNLE-NVLLDDA 233 (284)
T ss_pred C---CCCCcccCCCCChHHHHHHHcCCHH-----------------HHHHHHHCCCCCccCccc-CccCCCH
Confidence 8 5577999999987 99999999854 23333332 457888884 4888764
|
|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=264.56 Aligned_cols=171 Identities=19% Similarity=0.158 Sum_probs=154.5
Q ss_pred CccCCCHHHHHHHHHcCccccccc-------cCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCC
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAK-------IVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGH 73 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~-------~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~ 73 (624)
||++|+.+.|+.++++......+. .+-.| -+||+.|+. .| |+++|+.|++++ +++|.......
T Consensus 49 aaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~Ieg-appLWaAsa----AG---Hl~vVk~L~~~g--a~VN~tT~TNS 118 (615)
T KOG0508|consen 49 AARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEG-APPLWAASA----AG---HLEVVKLLLRRG--ASVNDTTRTNS 118 (615)
T ss_pred ehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCC-CchhhHHhc----cC---cHHHHHHHHHhc--CccccccccCC
Confidence 689999999999999643322111 13467 899999999 99 999999999998 88888888889
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcH
Q 006942 74 TAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLY 153 (624)
Q Consensus 74 TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~ 153 (624)
|||--||.-||+++||+|++++++ +++.|..|.|.||+||..||.+|+++|++.+++++. ++..|+|+||.|+..|+.
T Consensus 119 tPLraACfDG~leivKyLvE~gad-~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~-ks~kGNTALH~caEsG~v 196 (615)
T KOG0508|consen 119 TPLRAACFDGHLEIVKYLVEHGAD-PEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNA-KSYKGNTALHDCAESGSV 196 (615)
T ss_pred ccHHHHHhcchhHHHHHHHHcCCC-CcccccCCCeeEEeeeccCchHHHHHHHHhCCCcch-hcccCchHHHhhhhcccH
Confidence 999999999999999999999998 899999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHhCCCCCcccCCCCCCHHHHHHcCC
Q 006942 154 DVALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185 (624)
Q Consensus 154 ~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~ 185 (624)
|+++.|++++..+ .+|..|.|||..|+..|
T Consensus 197 divq~Ll~~ga~i--~~d~~GmtPL~~Aa~tG 226 (615)
T KOG0508|consen 197 DIVQLLLKHGAKI--DVDGHGMTPLLLAAVTG 226 (615)
T ss_pred HHHHHHHhCCcee--eecCCCCchHHHHhhhc
Confidence 9999999998754 56888999999999886
|
|
| >PHA02875 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=278.18 Aligned_cols=247 Identities=12% Similarity=0.080 Sum_probs=205.8
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|+..|+.+.++.+++.+. .++.+ +.+| .||||+|+. .| +.++|+.|++.| ++++.++.+|.||||.|+
T Consensus 9 A~~~g~~~iv~~Ll~~g~-~~n~~-~~~g-~tpL~~A~~----~~---~~~~v~~Ll~~g--a~~~~~~~~~~t~L~~A~ 76 (413)
T PHA02875 9 AILFGELDIARRLLDIGI-NPNFE-IYDG-ISPIKLAMK----FR---DSEAIKLLMKHG--AIPDVKYPDIESELHDAV 76 (413)
T ss_pred HHHhCCHHHHHHHHHCCC-CCCcc-CCCC-CCHHHHHHH----cC---CHHHHHHHHhCC--CCccccCCCcccHHHHHH
Confidence 688999999999998753 44455 6789 999999999 99 999999999998 566778889999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLL 160 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll 160 (624)
..|+.++|+.|++.++......+.+|.||||+|+..|+.+++++|++.|++++. ++.+|.||||+|+..|+.++++.|+
T Consensus 77 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~-~~~~g~tpLh~A~~~~~~~~v~~Ll 155 (413)
T PHA02875 77 EEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDI-PNTDKFSPLHLAVMMGDIKGIELLI 155 (413)
T ss_pred HCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999999999886667788999999999999999999999999999988 8999999999999999999999999
Q ss_pred HhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcc
Q 006942 161 KRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKE 240 (624)
Q Consensus 161 ~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (624)
+.+.++ +.+|..|.||||+|+..++
T Consensus 156 ~~g~~~-~~~d~~g~TpL~~A~~~g~------------------------------------------------------ 180 (413)
T PHA02875 156 DHKACL-DIEDCCGCTPLIIAMAKGD------------------------------------------------------ 180 (413)
T ss_pred hcCCCC-CCCCCCCCCHHHHHHHcCC------------------------------------------------------
Confidence 988765 6679999999999997742
Q ss_pred cccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHH
Q 006942 241 STRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAI 320 (624)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~ 320 (624)
.++++.+.+...+.+...+.++.||+|+|+.
T Consensus 181 -------------------------------------------------~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~ 211 (413)
T PHA02875 181 -------------------------------------------------IAICKMLLDSGANIDYFGKNGCVAALCYAIE 211 (413)
T ss_pred -------------------------------------------------HHHHHHHHhCCCCCCcCCCCCCchHHHHHHH
Confidence 1222223333332233244455799999999
Q ss_pred cCCHHHHHHHHHccCCCceec---CCCCCcHHHHHHHc---CChhHHHHHh
Q 006942 321 LGIPEVVNEFIMAYDSSSNWS---NQDGHTIFDHAVLY---RREKVFNLIQ 365 (624)
Q Consensus 321 ~g~~~iv~~Ll~~~~~d~~~~---d~~G~T~Lh~A~~~---~~~~iv~~Ll 365 (624)
.|+.++++.|+++ |+|+... +..|.||++++... ...+.++.++
T Consensus 212 ~~~~~iv~~Ll~~-gad~n~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li 261 (413)
T PHA02875 212 NNKIDIVRLFIKR-GADCNIMFMIEGEECTILDMICNMCTNLESEAIDALI 261 (413)
T ss_pred cCCHHHHHHHHHC-CcCcchHhhcCCCchHHHHHHHhhcCCcccHHHHHHH
Confidence 9999999999999 9998755 77899999987643 3345555554
|
|
| >PHA02798 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=283.97 Aligned_cols=165 Identities=15% Similarity=0.190 Sum_probs=139.9
Q ss_pred CHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHc---
Q 006942 6 DWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAK--- 82 (624)
Q Consensus 6 ~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~--- 82 (624)
+.+.|+.+++.. ..+.. ..| .|+++.+.. .+.+ +.++|+.|+++| ++++.+|..|.||||.|+..
T Consensus 17 ~~~~v~~ll~~~--~~~~~--~~~-~~~~~~yl~--~~~~---~~~iv~~Ll~~G--advn~~d~~g~TpL~~~~~n~~~ 84 (489)
T PHA02798 17 KLSTVKLLIKSC--NPNEI--VNE-YSIFQKYLQ--RDSP---STDIVKLFINLG--ANVNGLDNEYSTPLCTILSNIKD 84 (489)
T ss_pred cHHHHHHHHhcC--Chhhh--ccc-chHHHHHHh--CCCC---CHHHHHHHHHCC--CCCCCCCCCCCChHHHHHHhHHh
Confidence 567899999652 22222 456 788775554 1144 899999999998 78899999999999999864
Q ss_pred --CCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcC---CHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCc---HH
Q 006942 83 --GNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYG---HKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANL---YD 154 (624)
Q Consensus 83 --g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g---~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~---~~ 154 (624)
++.+++++|++++++ ++.+|..|.||||+|+..+ +.+++++|+++|++.+. +|.+|.||||+|+..++ .+
T Consensus 85 ~~~~~~iv~~Ll~~Gad-iN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~tpL~~a~~~~~~~~~~ 162 (489)
T PHA02798 85 YKHMLDIVKILIENGAD-INKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTL-LDKDGFTMLQVYLQSNHHIDIE 162 (489)
T ss_pred HHhHHHHHHHHHHCCCC-CCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccc-cCCCCCcHHHHHHHcCCcchHH
Confidence 779999999999999 8999999999999999986 78999999999999998 99999999999999988 99
Q ss_pred HHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 155 VALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 155 ~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
+++.|++.+.++....+..|.||||.++..
T Consensus 163 vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~ 192 (489)
T PHA02798 163 IIKLLLEKGVDINTHNNKEKYDTLHCYFKY 192 (489)
T ss_pred HHHHHHHhCCCcccccCcCCCcHHHHHHHh
Confidence 999999998887555567899999998764
|
|
| >PHA02917 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=283.81 Aligned_cols=362 Identities=10% Similarity=-0.022 Sum_probs=225.9
Q ss_pred ccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCc--------------------------------ch
Q 006942 2 IEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESD--------------------------------EA 49 (624)
Q Consensus 2 a~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~--------------------------------~~ 49 (624)
+..|+.+.|+.+++.+ ..++.+ +..| .||||.|+. .|+. .+
T Consensus 43 ~~~~~~~~v~~Ll~~g-a~v~~~-~~~g-~TpL~~Aa~----~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~ 115 (661)
T PHA02917 43 EHCNNVEVVKLLLDSG-TNPLHK-NWRQ-LTPLEEYTN----SRHVKVNKDIAMALLEATGYSNINDFNIFSYMKSKNVD 115 (661)
T ss_pred hhcCcHHHHHHHHHCC-CCcccc-CCCC-CCHHHHHHH----cCChhHHHHHHHHHHhccCCCCCCCcchHHHHHhhcCC
Confidence 3458899999998764 455566 8889 999999987 5510 04
Q ss_pred HHHHHHHHHccCchhhccCCCCCChHHHHHH--HcCCHHHHHHHHhcCCCCcccCCC---CC-----------ChHHHHH
Q 006942 50 ICLLDKLASKVDPETLARQDNHGHTAATLSA--AKGNLRALKLLVKYNPDLTNIRHG---EG-----------FLPVHDA 113 (624)
Q Consensus 50 ~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa--~~g~~~iv~~Ll~~~~~l~~~~n~---~G-----------~TPLh~A 113 (624)
.++|++|+++| ++++.+|.+|.||||.|+ ..|+.++|++|++++++ ++.+|. .| .||||+|
T Consensus 116 ~e~vk~Ll~~G--adin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~-vn~~d~~~~~g~~~~~~~~~~~~t~L~~a 192 (661)
T PHA02917 116 VDLIKVLVEHG--FDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCS-VLYEDEDDEYGYAYDDYQPRNCGTVLHLY 192 (661)
T ss_pred HHHHHHHHHcC--CCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCC-ccccccccccccccccccccccccHHHHH
Confidence 55666666665 678899999999999654 57899999999999988 444443 33 5999999
Q ss_pred HH-----------cCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcH--HHHHHHHHhCCCCC---cccCCCCCCH
Q 006942 114 AL-----------YGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLY--DVALDLLKRHPTIG---RDSIDSRRII 177 (624)
Q Consensus 114 a~-----------~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~--~~v~~Ll~~~~~l~---~~~d~~G~Tp 177 (624)
+. +++.+++++|++.|++++. +|.+|.||||+|+.+|+. ++++.|++ +.+.. ...|..|.+|
T Consensus 193 ~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~-~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~ 270 (661)
T PHA02917 193 IISHLYSESDTRAYVRPEVVKCLINHGIKPSS-IDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTR 270 (661)
T ss_pred HhhcccccccccccCcHHHHHHHHHCCCCccc-CCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccc
Confidence 86 5689999999999999998 899999999999999985 79999975 55433 2456778999
Q ss_pred HHHHHcCCCCCCC--CCcchhhhhhhhccccccccccCC-cccCCCCCCC-Ccchh-hhhhhcccCcccccCCCCcchhh
Q 006942 178 LNTLAQKPYAFAS--GSRLGRLQRLIYNCIPVEKELVPS-IQTNDYHDLD-GDIES-FIVTSKIHSKESTRFGSTQQITT 252 (624)
Q Consensus 178 Lh~Aa~~~~~~~~--~~~l~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 252 (624)
+|+|+.-++.+.. ......++.++........ .+.. .....+.+.- .-... ........+......+...
T Consensus 271 ~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~---- 345 (661)
T PHA02917 271 GIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGI-MCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDID---- 345 (661)
T ss_pred hHHHHHHHhhccccccchHHHHHHHHhCCCCCce-eEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCCc----
Confidence 9999853322221 1244556556555432100 0000 0000000000 00000 0000000000000000000
Q ss_pred hhhhhhHHHHHHhhhccCCCCC-CccchHhhhhhhhhHHHHHHHHHhh-cccccccCCccccHHHHHHHHcC--------
Q 006942 253 TFGAMLHKLHRMLWNAXMHLSP-GIKGIHDQKLTHMRTVEIVRIICEG-VVWTNFQNSAQLSVAMLAAAILG-------- 322 (624)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~-~i~~i~~~~~~~~~~~~lL~~l~~~-~~~~~~~~~~~g~tpLh~Aa~~g-------- 322 (624)
...++.+...+.. ..+.............+.+..+... ...... .+++|.||||.|++.+
T Consensus 346 ---------~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~-~~~~G~TpL~~a~~~~~~~~~~~~ 415 (661)
T PHA02917 346 ---------IPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVN-HLDDGEIPIGHLCKSNYGCYNFYT 415 (661)
T ss_pred ---------HHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccc-cCCCCCChhHHHHHhcccchhhhh
Confidence 0011111111110 0000000000001112233333321 211112 4556999999998543
Q ss_pred ---------------CHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhh
Q 006942 323 ---------------IPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHL 387 (624)
Q Consensus 323 ---------------~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHl 387 (624)
..++++.|+++ |+++...|..|+||||+|+..++.+++++|++.| ..+|.+|..|+||||+
T Consensus 416 ~~~~~~~~~~~~~~~~~~~v~~Ll~~-GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~G---Adin~~d~~G~T~L~~ 491 (661)
T PHA02917 416 YTYKKGLCDMSYACPILSTINICLPY-LKDINMIDKRGETLLHKAVRYNKQSLVSLLLESG---SDVNIRSNNGYTCIAI 491 (661)
T ss_pred hhhhhccchhhhhhhhHHHHHHHHHC-CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCc---CCCCCCCCCCCCHHHH
Confidence 35688999999 9998877999999999999999999999999999 6678999999999999
Q ss_pred hhh-cCCC
Q 006942 388 AGR-LVPS 394 (624)
Q Consensus 388 Aa~-~~~~ 394 (624)
|+. .++.
T Consensus 492 A~~~~~~~ 499 (661)
T PHA02917 492 AINESRNI 499 (661)
T ss_pred HHHhCCCH
Confidence 996 4443
|
|
| >PHA02878 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=281.08 Aligned_cols=246 Identities=14% Similarity=0.103 Sum_probs=197.9
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
||..|+.+.|+.+++++ .+++.+ +.+| +||||+||. .| +.+.++.|++.+..... ..+.+|||.|+
T Consensus 44 A~~~g~~e~vk~Ll~~g-advn~~-d~~g-~TpLh~A~~----~g---~~~~v~~Ll~~~~~~~~----~~~~~~l~~a~ 109 (477)
T PHA02878 44 AVEARNLDVVKSLLTRG-HNVNQP-DHRD-LTPLHIICK----EP---NKLGMKEMIRSINKCSV----FYTLVAIKDAF 109 (477)
T ss_pred HHHcCCHHHHHHHHHCC-CCCCCC-CCCC-CCHHHHHHH----Cc---cHhHHHHHHHHHhcccc----ccchhhHHHHH
Confidence 68899999999999875 356666 8899 999999999 99 99999999998633222 56789999999
Q ss_pred HcCCHHHHHHHH---------------------------------hcCCCCcccCCCC-CChHHHHHHHcCCHHHHHHHH
Q 006942 81 AKGNLRALKLLV---------------------------------KYNPDLTNIRHGE-GFLPVHDAALYGHKDTFHYLL 126 (624)
Q Consensus 81 ~~g~~~iv~~Ll---------------------------------~~~~~l~~~~n~~-G~TPLh~Aa~~g~~~iv~~Ll 126 (624)
..|+.++++.|+ +++++ ++.+|.. |.||||+|+..|+.+++++|+
T Consensus 110 ~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gad-in~~~~~~g~tpLh~A~~~~~~~iv~~Ll 188 (477)
T PHA02878 110 NNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGAD-INMKDRHKGNTALHYATENKDQRLTELLL 188 (477)
T ss_pred HcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCC-CCccCCCCCCCHHHHHHhCCCHHHHHHHH
Confidence 988866555554 44555 5667777 999999999999999999999
Q ss_pred HhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhcccc
Q 006942 127 EVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIP 206 (624)
Q Consensus 127 ~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~ 206 (624)
+.+++.+. .+..|.||||.|+..++.++++.|++.+.++ +.+|..|.||||+|+..+.
T Consensus 189 ~~gad~n~-~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i-n~~d~~g~TpLh~A~~~~~-------------------- 246 (477)
T PHA02878 189 SYGANVNI-PDKTNNSPLHHAVKHYNKPIVHILLENGAST-DARDKCGNTPLHISVGYCK-------------------- 246 (477)
T ss_pred HCCCCCCC-cCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhcC--------------------
Confidence 99999988 8999999999999999999999999998875 6789999999999995421
Q ss_pred ccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhh
Q 006942 207 VEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTH 286 (624)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 286 (624)
T Consensus 247 -------------------------------------------------------------------------------- 246 (477)
T PHA02878 247 -------------------------------------------------------------------------------- 246 (477)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcC-ChhHHHHHh
Q 006942 287 MRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYR-REKVFNLIQ 365 (624)
Q Consensus 287 ~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~-~~~iv~~Ll 365 (624)
..++++.+.+...+.+.+.+..|.||||.| .++.++++.|++. |+|+...|..|+||||+|+..+ ..++.++|+
T Consensus 247 --~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~-gadin~~d~~g~TpL~~A~~~~~~~~~~~~li 321 (477)
T PHA02878 247 --DYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEY-GADINSLNSYKLTPLSSAVKQYLCINIGRILI 321 (477)
T ss_pred --CHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHHcCccchHHHHH
Confidence 112222223333222232344789999999 5788999999999 9998877999999999999754 567788777
Q ss_pred cCC
Q 006942 366 GVN 368 (624)
Q Consensus 366 ~~~ 368 (624)
...
T Consensus 322 ~~~ 324 (477)
T PHA02878 322 SNI 324 (477)
T ss_pred HHH
Confidence 553
|
|
| >PHA02989 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=279.04 Aligned_cols=276 Identities=14% Similarity=0.061 Sum_probs=213.6
Q ss_pred hHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHc--CCHHHHHHHHhcCCCCcccCCCCCChH
Q 006942 32 TIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAK--GNLRALKLLVKYNPDLTNIRHGEGFLP 109 (624)
Q Consensus 32 T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~--g~~~iv~~Ll~~~~~l~~~~n~~G~TP 109 (624)
.+||--+. ...+.+.++|+.|++.| .++|.+ .+|.||||.++.. ++.++|++|+++|++ ++.++ .|.||
T Consensus 2 ~~l~~y~~----~~~~~~~~~v~~LL~~G--advN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAd-vn~~~-~~~tp 72 (494)
T PHA02989 2 SSLYEYIL----YSDTVDKNALEFLLRTG--FDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGAD-VNYKG-YIETP 72 (494)
T ss_pred cHHHHHHH----cCCcCcHHHHHHHHHcC--CCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCC-ccCCC-CCCCc
Confidence 35555555 33344899999999998 677877 6799999876654 479999999999998 66665 57999
Q ss_pred HHHHHHcC------CHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh---CcHHHHHHHHHhCCCCCcccCCCCCCHHHH
Q 006942 110 VHDAALYG------HKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAA---NLYDVALDLLKRHPTIGRDSIDSRRIILNT 180 (624)
Q Consensus 110 Lh~Aa~~g------~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~---~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~ 180 (624)
||.|+.++ +.+++++|+++|++.+. ++.+|.||||.|+.. ++.++++.|++++.++...+|..|.||||+
T Consensus 73 L~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~-~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~ 151 (494)
T PHA02989 73 LCAVLRNREITSNKIKKIVKLLLKFGADINL-KTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHM 151 (494)
T ss_pred HHHHHhccCcchhhHHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHH
Confidence 99998754 47899999999999998 899999999998865 678999999999988756789999999999
Q ss_pred HHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHH
Q 006942 181 LAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHK 260 (624)
Q Consensus 181 Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (624)
|+...+
T Consensus 152 a~~~~~-------------------------------------------------------------------------- 157 (494)
T PHA02989 152 YLESFS-------------------------------------------------------------------------- 157 (494)
T ss_pred HHHhcc--------------------------------------------------------------------------
Confidence 875421
Q ss_pred HHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcC----CHHHHHHHHHccCC
Q 006942 261 LHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILG----IPEVVNEFIMAYDS 336 (624)
Q Consensus 261 ~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g----~~~iv~~Ll~~~~~ 336 (624)
++...+++| .+...+.....+..|.||||.|+..+ +.++++.|+++ |.
T Consensus 158 ------------------------~~~~iv~~L---l~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~-Ga 209 (494)
T PHA02989 158 ------------------------VKKDVIKIL---LSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKK-GV 209 (494)
T ss_pred ------------------------CCHHHHHHH---HHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhC-CC
Confidence 111123333 33332111114567899999998764 89999999999 99
Q ss_pred CceecCCCCCcHHHHHHHcC------ChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHHhH
Q 006942 337 SSNWSNQDGHTIFDHAVLYR------REKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQW 410 (624)
Q Consensus 337 d~~~~d~~G~T~Lh~A~~~~------~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~ 410 (624)
++...|..|+|+||.++..+ ..+++++|++ + ..+|.+|.+|+||||+|+..++.+
T Consensus 210 ~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~---advn~~d~~G~TpL~~Aa~~~~~~--------------- 270 (494)
T PHA02989 210 NIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-Y---IKINKKDKKGFNPLLISAKVDNYE--------------- 270 (494)
T ss_pred CccccCCccccHHHHHHHhchhhcccchHHHHHHHh-C---CCCCCCCCCCCCHHHHHHHhcCHH---------------
Confidence 98777889999999887653 4677887765 3 458899999999999999998853
Q ss_pred HHHHHhhcCc-ccccccCCCCCChhhhhhHH
Q 006942 411 FKAIENLVHP-FFREATNDLKQTPREVFTEE 440 (624)
Q Consensus 411 ~~~v~~~~~~-~~~~~~N~~G~Tp~dl~~~~ 440 (624)
.|+.++.. .+.+.+|.+|.||++.+.+.
T Consensus 271 --~v~~LL~~Gadin~~d~~G~TpL~~A~~~ 299 (494)
T PHA02989 271 --AFNYLLKLGDDIYNVSKDGDTVLTYAIKH 299 (494)
T ss_pred --HHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 23333332 46889999999999998653
|
|
| >KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=294.32 Aligned_cols=335 Identities=18% Similarity=0.158 Sum_probs=249.7
Q ss_pred cCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHc
Q 006942 3 EKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAK 82 (624)
Q Consensus 3 ~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~ 82 (624)
..|..+.+..++.. +...++. +..| .||||+|+. .| +.+++.+|...+ ..-...+..|.||+|+|+..
T Consensus 317 ~~g~~~i~~~~l~~-~~~~~aa-r~~g-~t~lHlaa~----~~---~~~~~~~l~~~~--~~~~~a~~k~~~pl~la~~~ 384 (1143)
T KOG4177|consen 317 RLGHEEIVHLLLQA-GATPNAA-RTAG-YTPLHLAAK----EG---QVEVAGALLEHG--AQRRQAEEKGFTPLHLAVKS 384 (1143)
T ss_pred ccchHHHHHHHhhc-cCCcccc-CcCC-cccccHhhh----hh---hHHHHHHhhccc--cccCcccccCCcchhhhccc
Confidence 44555555555554 4445566 7888 999999999 99 999888888875 44566788999999999999
Q ss_pred CCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC-cHHHHHHHHH
Q 006942 83 GNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAAN-LYDVALDLLK 161 (624)
Q Consensus 83 g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~-~~~~v~~Ll~ 161 (624)
|..++++++++++.+ ++..++.|.||||.|+.+++.++++.+++.+++.+. .+..|.|++|+|+..| ..+.+..+++
T Consensus 385 g~~~~v~Lll~~ga~-~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~-~~~lG~T~lhvaa~~g~~~~~~~~l~~ 462 (1143)
T KOG4177|consen 385 GRVSVVELLLEAGAD-PNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNA-KAKLGYTPLHVAAKKGRYLQIARLLLQ 462 (1143)
T ss_pred CchhHHHhhhhccCC-cccCCCCCcceeeehhhccCcceEEEEeccCCChhh-HhhcCCChhhhhhhcccHhhhhhhHhh
Confidence 999999999999988 889999999999999999999999999999999999 9999999999999999 6777766666
Q ss_pred hCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCccc
Q 006942 162 RHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKES 241 (624)
Q Consensus 162 ~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (624)
... ..+..-..|.||||+|+..+.. ..++-++.... ..+.+
T Consensus 463 ~g~-~~n~~s~~G~T~Lhlaaq~Gh~-------~~~~llle~~~--------------~~~~~----------------- 503 (1143)
T KOG4177|consen 463 YGA-DPNAVSKQGFTPLHLAAQEGHT-------EVVQLLLEGGA--------------NDNLD----------------- 503 (1143)
T ss_pred cCC-CcchhccccCcchhhhhccCCc-------hHHHHhhhcCC--------------ccCcc-----------------
Confidence 544 4577888999999999988642 22221111000 00000
Q ss_pred ccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCcc-chHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHH
Q 006942 242 TRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIK-GIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAI 320 (624)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~ 320 (624)
...++. .......++..+... +.+...|-.. .+..|+||||.||.
T Consensus 504 ------------------------------~~~~l~~lhla~~~~~v~~~~~---l~~~ga~v~~-~~~r~~TpLh~A~~ 549 (1143)
T KOG4177|consen 504 ------------------------------AKKGLTPLHLAADEDTVKVAKI---LLEHGANVDL-RTGRGYTPLHVAVH 549 (1143)
T ss_pred ------------------------------chhccchhhhhhhhhhHHHHHH---HhhcCCceeh-hcccccchHHHHHh
Confidence 000000 011122223223332 3333332223 67778999999999
Q ss_pred cCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCCCccch
Q 006942 321 LGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGA 400 (624)
Q Consensus 321 ~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~ga 400 (624)
+|++++|++||++ +.|+...|+.|+||||.|+..|+.+|+++|+++| +.+|+.|.+|.||||+|++.|+.+++.
T Consensus 550 ~g~v~~VkfLLe~-gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~G---A~vna~d~~g~TpL~iA~~lg~~~~~k-- 623 (1143)
T KOG4177|consen 550 YGNVDLVKFLLEH-GADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHG---ASVNAADLDGFTPLHIAVRLGYLSVVK-- 623 (1143)
T ss_pred cCCchHHHHhhhC-CccccccCCCCCChhhHHHHcChHHHHHHHHHcC---CCCCcccccCcchhHHHHHhcccchhh--
Confidence 9999999999999 9999988999999999999999999999999999 778899999999999999999987421
Q ss_pred HHHhHHHHhHHHHHHhhcCcccccccCCCCCChhhhhhH
Q 006942 401 ALQMQRELQWFKAIENLVHPFFREATNDLKQTPREVFTE 439 (624)
Q Consensus 401 alq~~~~l~~~~~v~~~~~~~~~~~~N~~G~Tp~dl~~~ 439 (624)
.+. .+-...........|..|.||.++.++
T Consensus 624 ------~l~---~~~~~~~~~~~~~e~~~g~~p~~v~e~ 653 (1143)
T KOG4177|consen 624 ------LLK---VVTATPAATDPVKENRKGAVPEDVAEE 653 (1143)
T ss_pred ------HHH---hccCccccccchhhhhcccChhhHHHH
Confidence 110 010000112255668889999988654
|
|
| >PHA02798 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=273.69 Aligned_cols=253 Identities=14% Similarity=0.121 Sum_probs=204.5
Q ss_pred cCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhc-----CCcchHHHHHHHHHccCchhhccCCCCCChHHH
Q 006942 3 EKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDA-----ESDEAICLLDKLASKVDPETLARQDNHGHTAAT 77 (624)
Q Consensus 3 ~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~-----g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh 77 (624)
..++.+.|+.+++.+. +++.+ +..| .||||.|+. . + +.++++.|+++| ++++.+|.+|.||||
T Consensus 47 ~~~~~~iv~~Ll~~Ga-dvn~~-d~~g-~TpL~~~~~----n~~~~~~---~~~iv~~Ll~~G--adiN~~d~~G~TpLh 114 (489)
T PHA02798 47 DSPSTDIVKLFINLGA-NVNGL-DNEY-STPLCTILS----NIKDYKH---MLDIVKILIENG--ADINKKNSDGETPLY 114 (489)
T ss_pred CCCCHHHHHHHHHCCC-CCCCC-CCCC-CChHHHHHH----hHHhHHh---HHHHHHHHHHCC--CCCCCCCCCcCcHHH
Confidence 3467888888887654 56676 8899 999999986 4 6 799999999998 789999999999999
Q ss_pred HHHHcC---CHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCC---HHHHHHHHHhcCCCccccCCCCCcHHHHHHHh-
Q 006942 78 LSAAKG---NLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGH---KDTFHYLLEVTHGVDIYSGKDGANVLSFLIAA- 150 (624)
Q Consensus 78 ~Aa~~g---~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~---~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~- 150 (624)
+|+..| +.+++++|++++++ ++.+|..|.||||+|+..|+ .+++++|++.|++.+...+..|.||||.++..
T Consensus 115 ~a~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~ 193 (489)
T PHA02798 115 CLLSNGYINNLEILLFMIENGAD-TTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYN 193 (489)
T ss_pred HHHHcCCcChHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhc
Confidence 999876 78999999999998 88999999999999999998 99999999999988773356899999998765
Q ss_pred ---CcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcc
Q 006942 151 ---NLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDI 227 (624)
Q Consensus 151 ---~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (624)
++.++++.|++++.+. ...|..|.++++..... +++
T Consensus 194 ~~~~~~~ivk~Li~~Ga~i-~~~~~~~~~~~~~~l~~---------------l~~------------------------- 232 (489)
T PHA02798 194 IDRIDADILKLFVDNGFII-NKENKSHKKKFMEYLNS---------------LLY------------------------- 232 (489)
T ss_pred cccCCHHHHHHHHHCCCCc-ccCCccccchHHHHHHH---------------HHh-------------------------
Confidence 4799999999998765 55677788887722100 000
Q ss_pred hhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccC
Q 006942 228 ESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQN 307 (624)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~ 307 (624)
.....+...++++... .+ ....
T Consensus 233 -----------------------------------------------------~~~~~~~~i~~~l~~~-~d----vN~~ 254 (489)
T PHA02798 233 -----------------------------------------------------DNKRFKKNILDFIFSY-ID----INQV 254 (489)
T ss_pred -----------------------------------------------------hcccchHHHHHHHHhc-CC----CCCc
Confidence 0000111233333221 11 1236
Q ss_pred CccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 308 SAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 308 ~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
+..|.||||+|+..|+.+++++|++. |+|+...|..|+||||+|+++++.++++.|++.+
T Consensus 255 d~~G~TPL~~A~~~~~~~~v~~LL~~-GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~ 314 (489)
T PHA02798 255 DELGFNPLYYSVSHNNRKIFEYLLQL-GGDINIITELGNTCLFTAFENESKFIFNSILNKK 314 (489)
T ss_pred CcCCccHHHHHHHcCcHHHHHHHHHc-CCcccccCCCCCcHHHHHHHcCcHHHHHHHHccC
Confidence 77899999999999999999999999 9998877999999999999999999999999887
|
|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=259.01 Aligned_cols=143 Identities=20% Similarity=0.151 Sum_probs=125.6
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCC-CCCChH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRH-GEGFLP 109 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n-~~G~TP 109 (624)
.+-.+.|++ .| .++-|+.|++.. ..+++..|.+|.|+||.||.+++++++++|++++++ ++..+ .-|.||
T Consensus 45 ~~~~v~A~q----~G---~l~~v~~lve~~-g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gad-vn~~gG~l~stP 115 (600)
T KOG0509|consen 45 LDDIVKATQ----YG---ELETVKELVESE-GESVNNPDREGVTLLHWAAINNRLDVARYLISHGAD-VNAIGGVLGSTP 115 (600)
T ss_pred hhhhhhHhh----cc---hHHHHHHHHhhc-CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCC-ccccCCCCCCCc
Confidence 578899999 99 999999999983 378889999999999999999999999999999998 55555 678999
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 110 VHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 110 Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
||+||++|+..+|++|+++|+++.. +|.+|.||||.|+..++.-.+.++|.++.+ .+.+|.+|+||||+|+.+
T Consensus 116 LHWAar~G~~~vv~lLlqhGAdpt~-~D~~G~~~lHla~~~~~~~~vayll~~~~d-~d~~D~~grTpLmwAayk 188 (600)
T KOG0509|consen 116 LHWAARNGHISVVDLLLQHGADPTL-KDKQGLTPLHLAAQFGHTALVAYLLSKGAD-IDLRDNNGRTPLMWAAYK 188 (600)
T ss_pred chHHHHcCcHHHHHHHHHcCCCCce-ecCCCCcHHHHHHHhCchHHHHHHHHhccc-CCCcCCCCCCHHHHHHHh
Confidence 9999999999999999999999999 999999999999999999999999988743 355666666666666654
|
|
| >KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=280.37 Aligned_cols=334 Identities=17% Similarity=0.106 Sum_probs=263.3
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
||+.|..+..+.++++.- .+..+ +..+ .||+|+|.+ .| +.++++.+++.+ ...+..+..|.||||+++
T Consensus 282 AA~~~~~e~~~~ll~~ga-~~~~~-~~~~-kt~l~~a~~----~g---~~~i~~~~l~~~--~~~~aar~~g~t~lHlaa 349 (1143)
T KOG4177|consen 282 AARAGQVEVCKLLLQNGA-DVLAK-ARDD-QTPLHIASR----LG---HEEIVHLLLQAG--ATPNAARTAGYTPLHLAA 349 (1143)
T ss_pred hhccchhhhHhhhhccCc-ccccc-cccc-cChhhhhcc----cc---hHHHHHHHhhcc--CCccccCcCCcccccHhh
Confidence 567777888877776643 34344 7778 999999999 99 999999999997 677889999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLL 160 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll 160 (624)
..|+.++..+|.+.++. .....+.|.||+|+|+.+|..+++++++..+...+. +++.|.||||.|+.+++.++++.++
T Consensus 350 ~~~~~~~~~~l~~~~~~-~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~-~gk~gvTplh~aa~~~~~~~v~l~l 427 (1143)
T KOG4177|consen 350 KEGQVEVAGALLEHGAQ-RRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNS-AGKNGVTPLHVAAHYGNPRVVKLLL 427 (1143)
T ss_pred hhhhHHHHHHhhccccc-cCcccccCCcchhhhcccCchhHHHhhhhccCCccc-CCCCCcceeeehhhccCcceEEEEe
Confidence 99999988888888887 556778899999999999999999999999999888 9999999999999999999999999
Q ss_pred HhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcc
Q 006942 161 KRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKE 240 (624)
Q Consensus 161 ~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (624)
+...+. +..+..|.||+|+|+..+.....+. ...+... . .+.
T Consensus 428 ~~gA~~-~~~~~lG~T~lhvaa~~g~~~~~~~------~l~~~g~--------------~-----------------~n~ 469 (1143)
T KOG4177|consen 428 KRGASP-NAKAKLGYTPLHVAAKKGRYLQIAR------LLLQYGA--------------D-----------------PNA 469 (1143)
T ss_pred ccCCCh-hhHhhcCCChhhhhhhcccHhhhhh------hHhhcCC--------------C-----------------cch
Confidence 987764 7789999999999998852000000 0000000 0 000
Q ss_pred cccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHH
Q 006942 241 STRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAI 320 (624)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~ 320 (624)
...+ ++. ....+...+|...+.++....... .. ..+.|.+++|.|..
T Consensus 470 ~s~~---------------------------G~T--~Lhlaaq~Gh~~~~~llle~~~~~---~~-~~~~~l~~lhla~~ 516 (1143)
T KOG4177|consen 470 VSKQ---------------------------GFT--PLHLAAQEGHTEVVQLLLEGGAND---NL-DAKKGLTPLHLAAD 516 (1143)
T ss_pred hccc---------------------------cCc--chhhhhccCCchHHHHhhhcCCcc---Cc-cchhccchhhhhhh
Confidence 0011 111 123344556666666655443221 22 56678999999999
Q ss_pred cCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCCCccch
Q 006942 321 LGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGA 400 (624)
Q Consensus 321 ~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~ga 400 (624)
.+.+..++.+++. +.+....+..|.||||+|+.+|+.++|++|++++ .+++++|+.|.||||.||..|+.++
T Consensus 517 ~~~v~~~~~l~~~-ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~g---Adv~ak~~~G~TPLH~Aa~~G~~~i---- 588 (1143)
T KOG4177|consen 517 EDTVKVAKILLEH-GANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHG---ADVNAKDKLGYTPLHQAAQQGHNDI---- 588 (1143)
T ss_pred hhhHHHHHHHhhc-CCceehhcccccchHHHHHhcCCchHHHHhhhCC---ccccccCCCCCChhhHHHHcChHHH----
Confidence 9999999999999 8888877999999999999999999999999999 7788999999999999999997542
Q ss_pred HHHhHHHHhHHHHHHhhcC-cccccccCCCCCChhhhhhHH
Q 006942 401 ALQMQRELQWFKAIENLVH-PFFREATNDLKQTPREVFTEE 440 (624)
Q Consensus 401 alq~~~~l~~~~~v~~~~~-~~~~~~~N~~G~Tp~dl~~~~ 440 (624)
++-++. ....|..+.+|.||+.++...
T Consensus 589 -------------~~LLlk~GA~vna~d~~g~TpL~iA~~l 616 (1143)
T KOG4177|consen 589 -------------AELLLKHGASVNAADLDGFTPLHIAVRL 616 (1143)
T ss_pred -------------HHHHHHcCCCCCcccccCcchhHHHHHh
Confidence 222222 245899999999999998654
|
|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=253.87 Aligned_cols=213 Identities=18% Similarity=0.125 Sum_probs=179.6
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHH
Q 006942 70 NHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIA 149 (624)
Q Consensus 70 ~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~ 149 (624)
..-.+.++.|++.|.++-|+.|++.....++..|.+|.|+||+||.+++.+++++|++++++++..-+.-|.||||+|++
T Consensus 42 d~~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar 121 (600)
T KOG0509|consen 42 DSSLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAAR 121 (600)
T ss_pred chhhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHH
Confidence 33457789999999999999999994444889999999999999999999999999999999998545888999999999
Q ss_pred hCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchh
Q 006942 150 ANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIES 229 (624)
Q Consensus 150 ~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (624)
+|+..+|..|++++.+. ..+|.+|.||||+|++.++.
T Consensus 122 ~G~~~vv~lLlqhGAdp-t~~D~~G~~~lHla~~~~~~------------------------------------------ 158 (600)
T KOG0509|consen 122 NGHISVVDLLLQHGADP-TLKDKQGLTPLHLAAQFGHT------------------------------------------ 158 (600)
T ss_pred cCcHHHHHHHHHcCCCC-ceecCCCCcHHHHHHHhCch------------------------------------------
Confidence 99999999999998875 78999999999999987531
Q ss_pred hhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCc
Q 006942 230 FIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSA 309 (624)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~ 309 (624)
..+-.+.... .+.+. .|+
T Consensus 159 ----------------------------------------------------------~~vayll~~~---~d~d~-~D~ 176 (600)
T KOG0509|consen 159 ----------------------------------------------------------ALVAYLLSKG---ADIDL-RDN 176 (600)
T ss_pred ----------------------------------------------------------HHHHHHHHhc---ccCCC-cCC
Confidence 0111111111 11123 899
Q ss_pred cccHHHHHHHHcCCHHHHHHHHHccCCCceec-CCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhh
Q 006942 310 QLSVAMLAAAILGIPEVVNEFIMAYDSSSNWS-NQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLA 388 (624)
Q Consensus 310 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~-d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlA 388 (624)
+|+||||+|+.+|+...++.||+. +++.... |+.|.||||+|+..|+.+++.+|++-+ .....+|.+|.||+.+|
T Consensus 177 ~grTpLmwAaykg~~~~v~~LL~f-~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~---~~~d~~~~~g~tp~~LA 252 (600)
T KOG0509|consen 177 NGRTPLMWAAYKGFALFVRRLLKF-GASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGG---ADLDKTNTNGKTPFDLA 252 (600)
T ss_pred CCCCHHHHHHHhcccHHHHHHHHh-cccccccccccCCchHHHHHhcCCcceEehhhhcC---CcccccccCCCCHHHHH
Confidence 999999999999999889999998 8888888 699999999999999999999666665 33448999999999999
Q ss_pred hhc
Q 006942 389 GRL 391 (624)
Q Consensus 389 a~~ 391 (624)
.+.
T Consensus 253 ~~~ 255 (600)
T KOG0509|consen 253 QER 255 (600)
T ss_pred HHh
Confidence 876
|
|
| >PHA02730 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=256.22 Aligned_cols=302 Identities=11% Similarity=-0.002 Sum_probs=213.2
Q ss_pred HHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcC--CHHH
Q 006942 10 VEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKG--NLRA 87 (624)
Q Consensus 10 v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g--~~~i 87 (624)
++..++........+ |.+| +||||+|+. .|+..+.|+|+.|+++| ++++.+|..|.||||+|+..| +.|+
T Consensus 23 ~~~~~~~~~~in~~k-d~~G-~TaLh~A~~----~~~~~~~eivklLLs~G--Adin~kD~~G~TPLh~Aa~~~~~~~eI 94 (672)
T PHA02730 23 IKLEIETCHNLSKHI-DRRG-NNALHCYVS----NKCDTDIKIVRLLLSRG--VERLCRNNEGLTPLGVYSKRKYVKSQI 94 (672)
T ss_pred HHHHHHHhcchhhhc-CCCC-CcHHHHHHH----cCCcCcHHHHHHHHhCC--CCCcccCCCCCChHHHHHHcCCCcHHH
Confidence 444444432222244 8899 999999999 86111499999999998 888999999999999999977 7999
Q ss_pred HHHHHhcCCCC-cccCCCCCChHHHHHHH--cCCHHHHHHHHH-hcCCCcccc----CCCCCcHHHHHHHhCcHHHHHHH
Q 006942 88 LKLLVKYNPDL-TNIRHGEGFLPVHDAAL--YGHKDTFHYLLE-VTHGVDIYS----GKDGANVLSFLIAANLYDVALDL 159 (624)
Q Consensus 88 v~~Ll~~~~~l-~~~~n~~G~TPLh~Aa~--~g~~~iv~~Ll~-~~~~~~~~~----~~~G~t~Lh~A~~~~~~~~v~~L 159 (624)
|++|++.+.+. .+..+..|.+|||.++. +++.+++++|++ .+.+++... +..|.+|++++...++.+++++|
T Consensus 95 v~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklL 174 (672)
T PHA02730 95 VHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWL 174 (672)
T ss_pred HHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHH
Confidence 99999995531 45677779999999998 899999999997 444544311 13789999999999999999999
Q ss_pred HHhCCCCC------cccCCCCC-CHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhh
Q 006942 160 LKRHPTIG------RDSIDSRR-IILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIV 232 (624)
Q Consensus 160 l~~~~~l~------~~~d~~G~-TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (624)
++.+.+.. ...|..+. |.||+..-....
T Consensus 175 i~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~--------------------------------------------- 209 (672)
T PHA02730 175 LKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRE--------------------------------------------- 209 (672)
T ss_pred HHcCCcccccccccccccCCccchhHHHHHHhhhh---------------------------------------------
Confidence 99988762 11333444 445544322100
Q ss_pred hhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCcccc
Q 006942 233 TSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLS 312 (624)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~ 312 (624)
.... ..++++.+...+++-+ .++..|.
T Consensus 210 -------------------------------------------------~~~n---~~eiv~lLIs~GadIN-~kd~~G~ 236 (672)
T PHA02730 210 -------------------------------------------------SESL---SKDVIKCLIDNNVSIH-GRDEGGS 236 (672)
T ss_pred -------------------------------------------------hhcc---CHHHHHHHHHCCCCCC-CCCCCCC
Confidence 0001 2333333444433212 3788999
Q ss_pred HHHHH--HHHcCCHHHHHHHHH--------------------------------ccCCCcee------------------
Q 006942 313 VAMLA--AAILGIPEVVNEFIM--------------------------------AYDSSSNW------------------ 340 (624)
Q Consensus 313 tpLh~--Aa~~g~~~iv~~Ll~--------------------------------~~~~d~~~------------------ 340 (624)
||||+ |+..|+.|+|+.|++ + +.|...
T Consensus 237 TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~~~~~~~~ 315 (672)
T PHA02730 237 LPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPY-NVDMEIVNLLIEGRHTLIDVMRSI 315 (672)
T ss_pred CHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccC-CcchHHHHHHhhccCcchhhhhcc
Confidence 99995 666788999999999 5 555533
Q ss_pred --cCCCCCc---------------------HHHHHHHcC---ChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCC
Q 006942 341 --SNQDGHT---------------------IFDHAVLYR---REKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPS 394 (624)
Q Consensus 341 --~d~~G~T---------------------~Lh~A~~~~---~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 394 (624)
.|..|.+ .||.=.+++ +.+++++|+++| +.+|.. ..|+||||+|+..++.
T Consensus 316 ~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~G---AdIN~k-~~G~TpLH~Aa~~nnn 391 (672)
T PHA02730 316 TSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNG---ATMDKT-TDNNYPLHDYFVNNNN 391 (672)
T ss_pred ccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCC---CCCCcC-CCCCcHHHHHHHHcCC
Confidence 2666755 677766755 689999999999 667775 7999999999988752
Q ss_pred CCccchHHHhHHHHhHHHHHHhhcCcc---cccccCCCCCChhh
Q 006942 395 SEVAGAALQMQRELQWFKAIENLVHPF---FREATNDLKQTPRE 435 (624)
Q Consensus 395 ~~~~gaalq~~~~l~~~~~v~~~~~~~---~~~~~N~~G~Tp~d 435 (624)
.+ . .+.++-++... ..+.+|.+|+||+.
T Consensus 392 ~i----------~---~eIvelLIs~Ga~~dIN~kd~~G~T~Lh 422 (672)
T PHA02730 392 IV----------D---VNVVRFIVENNGHMAINHVSNNGRLCMY 422 (672)
T ss_pred cc----------h---HHHHHHHHHcCCCccccccccCCCchHh
Confidence 10 0 02344444332 47888999999996
|
|
| >PHA02792 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-27 Score=251.44 Aligned_cols=363 Identities=12% Similarity=0.046 Sum_probs=236.6
Q ss_pred HHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcch----HHHHHHHHHccCchhhccCCCCCChHHHH-HHHcC
Q 006942 9 GVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEA----ICLLDKLASKVDPETLARQDNHGHTAATL-SAAKG 83 (624)
Q Consensus 9 ~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~----~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~-Aa~~g 83 (624)
..+-|++.+.+.+. ..+| .||||.-.. .. | .++|-.|+.. .+..|.+|.+|+|+ |+..|
T Consensus 20 ~~~~l~~~g~~~~~---~~~~-~t~~~~~~~----~~---~~~~~~~~~~~~~~~-----~~~~n~~~~~~~~~~~s~n~ 83 (631)
T PHA02792 20 SAQSLIESGANPLY---EYDG-ETPLKAYVT----KK---NNNIKNDVVILLLSS-----VDYKNINDFDIFEYLCSDNI 83 (631)
T ss_pred HHHHHHHcCCCccc---ccCC-CccHHHHHh----hh---hhhHHHHHHHHHHhC-----CCcCccCCccHHHHHHHhcc
Confidence 34566666665553 4578 899999866 44 4 3344444443 46788899999987 45789
Q ss_pred CHHHHHHHHhcCCCCcccCCCCCChHHHHHHH-cCCHHHHHHHHHhcCCCcc----------------------------
Q 006942 84 NLRALKLLVKYNPDLTNIRHGEGFLPVHDAAL-YGHKDTFHYLLEVTHGVDI---------------------------- 134 (624)
Q Consensus 84 ~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~-~g~~~iv~~Ll~~~~~~~~---------------------------- 134 (624)
+.|+|++|++++++ ++.++..|.||+|+|+. .++.|++++|+++|++...
T Consensus 84 ~lElvk~LI~~GAd-vN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 162 (631)
T PHA02792 84 DIELLKLLISKGLE-INSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDY 162 (631)
T ss_pred cHHHHHHHHHcCCC-cccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhcccc
Confidence 99999999999998 88888889999999976 6999999999999976210
Q ss_pred -------ccCCCCCcHHHHHHHhC-------cHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhh
Q 006942 135 -------YSGKDGANVLSFLIAAN-------LYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRL 200 (624)
Q Consensus 135 -------~~~~~G~t~Lh~A~~~~-------~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~ 200 (624)
.++..|.||||+|+.++ +.|+++.|+.++.++ +..|.+|.||||+|+.+.. -....++.+
T Consensus 163 ~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~-~~~d~~g~t~l~~~~~~~~-----i~~ei~~~L 236 (631)
T PHA02792 163 DYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEM-RYYTYREHTTLYYYVDKCD-----IKREIFDAL 236 (631)
T ss_pred ccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCc-CccCCCCChHHHHHHHccc-----chHHHHHHH
Confidence 16778999999999999 899999999998876 5678899999999998741 123444544
Q ss_pred hhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhh---------------HHHHHHh
Q 006942 201 IYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAML---------------HKLHRML 265 (624)
Q Consensus 201 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 265 (624)
+..+.+- ......+..+++...+..+.+...-....++ ..+....
T Consensus 237 ~~~~~~~--------------------~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~ 296 (631)
T PHA02792 237 FDSNYSG--------------------NELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIIS 296 (631)
T ss_pred Hhccccc--------------------cchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHH
Confidence 4433211 0000111111111111000000000000000 0000000
Q ss_pred hhccCCCCCCccchHhhhhhh-hhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCC
Q 006942 266 WNAXMHLSPGIKGIHDQKLTH-MRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQD 344 (624)
Q Consensus 266 ~~~~~~~~~~i~~i~~~~~~~-~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~ 344 (624)
..+.... ..+.++......+ ....++++.+.+... .. .......++|.||..|+.++|+.|+++ |+++...|.+
T Consensus 297 ~~~~~~~-~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga--~~-~r~~~~n~~~~Aa~~gn~eIVelLIs~-GADIN~kD~~ 371 (631)
T PHA02792 297 SILKRYT-DSIQDLLSEYVSYHTVYINVIKCMIDEGA--TL-YRFKHINKYFQKFDNRDPKVVEYILKN-GNVVVEDDDN 371 (631)
T ss_pred HHHHHHh-HHHHHHHHHHHhcCCccHHHHHHHHHCCC--cc-ccCCcchHHHHHHHcCCHHHHHHHHHc-CCchhhhcCC
Confidence 0000000 1112222221111 234566666666655 22 123357789999999999999999999 9998777655
Q ss_pred --CCcHHHHHHHcCChh---HHHHHhcCCccccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcC
Q 006942 345 --GHTIFDHAVLYRREK---VFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVH 419 (624)
Q Consensus 345 --G~T~Lh~A~~~~~~~---iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~ 419 (624)
|.||||.|......+ +++++++++ +++|.+|..|+||||+|+..++.+ .++-++.
T Consensus 372 g~~~TpLh~A~~n~~~~v~~IlklLIs~G---ADIN~kD~~G~TPLh~Aa~~~n~e-----------------ivelLLs 431 (631)
T PHA02792 372 IINIMPLFPTLSIHESDVLSILKLCKPYI---DDINKIDKHGRSILYYCIESHSVS-----------------LVEWLID 431 (631)
T ss_pred CCChhHHHHHHHhccHhHHHHHHHHHhcC---CccccccccCcchHHHHHHcCCHH-----------------HHHHHHH
Confidence 579999988776654 578888888 668899999999999999988743 1222222
Q ss_pred -cccccccCCCCCChhhhhhH
Q 006942 420 -PFFREATNDLKQTPREVFTE 439 (624)
Q Consensus 420 -~~~~~~~N~~G~Tp~dl~~~ 439 (624)
....+.+|..|+||++++..
T Consensus 432 ~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 432 NGADINITTKYGSTCIGICVI 452 (631)
T ss_pred CCCCCCCcCCCCCCHHHHHHH
Confidence 23578899999999999754
|
|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-27 Score=231.31 Aligned_cols=217 Identities=17% Similarity=0.210 Sum_probs=183.4
Q ss_pred CccCCCHHHHHHHHHcCcc----ccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCc-------hhhccCC
Q 006942 1 MIEKNDWQGVEDFVTNHPD----ALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDP-------ETLARQD 69 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~----~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~-------~~~~~~d 69 (624)
|+..|++.....++.+... .+... ..+| .|||-+||+ +| |.++|++|+++... ...+-.+
T Consensus 11 aa~~g~l~~l~~ll~~~s~~ei~~l~~~-~~~g-~tPL~iaaR----nG---H~~vVeyLle~~~a~~e~~GsV~FDge~ 81 (615)
T KOG0508|consen 11 AARDGKLQLLAKLLINSSNEEIISLIGE-VQNG-GTPLLIAAR----NG---HADVVEYLLEHCRASPEQGGSVRFDGET 81 (615)
T ss_pred HhhhhhHHHHHHHHhCCchHHHHHHhcc-ccCC-CCceeeehh----cC---cHHHHHHHHHHhcCCccCCceEEeCCcc
Confidence 5788999999998887542 12222 4678 899999999 99 99999999996421 1234456
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHH
Q 006942 70 NHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIA 149 (624)
Q Consensus 70 ~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~ 149 (624)
.+|-+||-.|+..||+++||.|++++++ ++.......|||--||.-||.|+|+||++++++... .|..|.|.||+|+.
T Consensus 82 IegappLWaAsaAGHl~vVk~L~~~ga~-VN~tT~TNStPLraACfDG~leivKyLvE~gad~~I-anrhGhTcLmIa~y 159 (615)
T KOG0508|consen 82 IEGAPPLWAASAAGHLEVVKLLLRRGAS-VNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEI-ANRHGHTCLMIACY 159 (615)
T ss_pred cCCCchhhHHhccCcHHHHHHHHHhcCc-cccccccCCccHHHHHhcchhHHHHHHHHcCCCCcc-cccCCCeeEEeeec
Confidence 7899999999999999999999999987 666667788999999999999999999999999999 99999999999999
Q ss_pred hCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchh
Q 006942 150 ANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIES 229 (624)
Q Consensus 150 ~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (624)
+|+.|++++|++.+.++. .
T Consensus 160 kGh~~I~qyLle~gADvn-~------------------------------------------------------------ 178 (615)
T KOG0508|consen 160 KGHVDIAQYLLEQGADVN-A------------------------------------------------------------ 178 (615)
T ss_pred cCchHHHHHHHHhCCCcc-h------------------------------------------------------------
Confidence 999999999999887652 1
Q ss_pred hhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCc
Q 006942 230 FIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSA 309 (624)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~ 309 (624)
++.
T Consensus 179 -----------------------------------------------------------------------------ks~ 181 (615)
T KOG0508|consen 179 -----------------------------------------------------------------------------KSY 181 (615)
T ss_pred -----------------------------------------------------------------------------hcc
Confidence 455
Q ss_pred cccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 310 QLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 310 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
.|+|+||.+++.|++|+++.|+++ + .....|..|.|||..|+..|+.++|++|+...
T Consensus 182 kGNTALH~caEsG~vdivq~Ll~~-g-a~i~~d~~GmtPL~~Aa~tG~~~iVe~L~~~~ 238 (615)
T KOG0508|consen 182 KGNTALHDCAESGSVDIVQLLLKH-G-AKIDVDGHGMTPLLLAAVTGHTDIVERLLQCE 238 (615)
T ss_pred cCchHHHhhhhcccHHHHHHHHhC-C-ceeeecCCCCchHHHHhhhcchHHHHHHhcCC
Confidence 678888888899999999999998 4 44445888999999999999999999999644
|
|
| >PHA02859 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=215.47 Aligned_cols=180 Identities=13% Similarity=0.132 Sum_probs=150.4
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcC--CHHHHHHHHHhcCCCccccC-CCCCcHH
Q 006942 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYG--HKDTFHYLLEVTHGVDIYSG-KDGANVL 144 (624)
Q Consensus 68 ~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g--~~~iv~~Ll~~~~~~~~~~~-~~G~t~L 144 (624)
....+.||||.|+..|+.++|+.|++. .+.+|..|.||||+|+..+ +.+++++|++.+++++. ++ ..|.|||
T Consensus 17 ~~~~~~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~-~~~~~g~TpL 91 (209)
T PHA02859 17 LFYRYCNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNF-KTRDNNLSAL 91 (209)
T ss_pred HhhccCcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCc-cCCCCCCCHH
Confidence 345678999999999999999999975 3467899999999999865 89999999999999987 65 5899999
Q ss_pred HHHHHh---CcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCC
Q 006942 145 SFLIAA---NLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYH 221 (624)
Q Consensus 145 h~A~~~---~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~ 221 (624)
|+|+.. ++.++++.|++++.++ +.+|..|.||||.|+..
T Consensus 92 h~a~~~~~~~~~eiv~~Ll~~gadi-n~~d~~G~TpLh~a~~~------------------------------------- 133 (209)
T PHA02859 92 HHYLSFNKNVEPEILKILIDSGSSI-TEEDEDGKNLLHMYMCN------------------------------------- 133 (209)
T ss_pred HHHHHhCccccHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHh-------------------------------------
Confidence 998764 4789999999887765 45666777777765422
Q ss_pred CCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcc
Q 006942 222 DLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVV 301 (624)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~ 301 (624)
T Consensus 134 -------------------------------------------------------------------------------- 133 (209)
T PHA02859 134 -------------------------------------------------------------------------------- 133 (209)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHH-HHHcCChhHHHHHhcCCccccccccccCC
Q 006942 302 WTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDH-AVLYRREKVFNLIQGVNFTTFLFSSRDKA 380 (624)
Q Consensus 302 ~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~-A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~ 380 (624)
..++.++++.|++. +.++...|..|.||||. |+..++.+++++|++.| ..++.+|..
T Consensus 134 ------------------~~~~~~iv~~Li~~-gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~G---adi~~~d~~ 191 (209)
T PHA02859 134 ------------------FNVRINVIKLLIDS-GVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLG---IDINETNKS 191 (209)
T ss_pred ------------------ccCCHHHHHHHHHc-CCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcC---CCCCCCCCC
Confidence 13567899999999 98888779999999996 56788999999999998 567799999
Q ss_pred CCchhhhhhhcC
Q 006942 381 GNNILHLAGRLV 392 (624)
Q Consensus 381 GnTpLHlAa~~~ 392 (624)
|.||||+|...+
T Consensus 192 g~tpl~la~~~~ 203 (209)
T PHA02859 192 GYNCYDLIKFRN 203 (209)
T ss_pred CCCHHHHHhhhh
Confidence 999999998764
|
|
| >PHA02792 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=236.92 Aligned_cols=294 Identities=12% Similarity=0.041 Sum_probs=197.5
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHH-cCCHHHHHHHHhcCCC-------
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAA-KGNLRALKLLVKYNPD------- 97 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~-~g~~~iv~~Ll~~~~~------- 97 (624)
+-+| .+|+|.-|. +.| ++|+|++|+++| ++++.+++.|.||+|+|+. .|+.|++++|+++|++
T Consensus 68 n~~~-~~~~~~~~s---~n~---~lElvk~LI~~G--AdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~ 138 (631)
T PHA02792 68 NIND-FDIFEYLCS---DNI---DIELLKLLISKG--LEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQY 138 (631)
T ss_pred ccCC-ccHHHHHHH---hcc---cHHHHHHHHHcC--CCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCccccccc
Confidence 7788 899987655 378 999999999997 7889999999999999975 6999999999999864
Q ss_pred ----------------------------CcccCCCCCChHHHHHHHcC-------CHHHHHHHHHhcCCCccccCCCCCc
Q 006942 98 ----------------------------LTNIRHGEGFLPVHDAALYG-------HKDTFHYLLEVTHGVDIYSGKDGAN 142 (624)
Q Consensus 98 ----------------------------l~~~~n~~G~TPLh~Aa~~g-------~~~iv~~Ll~~~~~~~~~~~~~G~t 142 (624)
.++..|..|.||||+|+.++ +.|+++.|++++++... .|..|.|
T Consensus 139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~-~d~~g~t 217 (631)
T PHA02792 139 GYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRY-YTYREHT 217 (631)
T ss_pred CcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCc-cCCCCCh
Confidence 12345677999999999999 89999999999999988 8999999
Q ss_pred HHHHHHHhC--cHHHHHHHHHhCCCCCcc------------cCC-------------CCCCHHHHHHcCCCCCCCCCcc-
Q 006942 143 VLSFLIAAN--LYDVALDLLKRHPTIGRD------------SID-------------SRRIILNTLAQKPYAFASGSRL- 194 (624)
Q Consensus 143 ~Lh~A~~~~--~~~~v~~Ll~~~~~l~~~------------~d~-------------~G~TpLh~Aa~~~~~~~~~~~l- 194 (624)
|||+|+.+. ..|+++.|+...-..... ++. .|.+|-.+.. .+.+....
T Consensus 218 ~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~----~~~~~~~~~ 293 (631)
T PHA02792 218 TLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILE----LCNSLRNNI 293 (631)
T ss_pred HHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhh----hhhhhhhhh
Confidence 999999999 789999998752211110 000 1222211111 11111111
Q ss_pred ----------hhhhhhhh----cc-ccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhH
Q 006942 195 ----------GRLQRLIY----NC-IPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLH 259 (624)
Q Consensus 195 ----------~~~~~~i~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (624)
..+|.++. ++ ...+-+...... ..... + ......
T Consensus 294 ~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~---------------------Ga~~~--r-~~~~n~------- 342 (631)
T PHA02792 294 IISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDE---------------------GATLY--R-FKHINK------- 342 (631)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHC---------------------CCccc--c-CCcchH-------
Confidence 11222221 11 000000000000 00000 0 000000
Q ss_pred HHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCcc--ccHHHHHHHHcCCH---HHHHHHHHcc
Q 006942 260 KLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQ--LSVAMLAAAILGIP---EVVNEFIMAY 334 (624)
Q Consensus 260 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~--g~tpLh~Aa~~g~~---~iv~~Ll~~~ 334 (624)
...+...++...+++|.....++. . .+.+ +.||||.|+..... ++++.|+++
T Consensus 343 ------------------~~~Aa~~gn~eIVelLIs~GADIN---~-kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~- 399 (631)
T PHA02792 343 ------------------YFQKFDNRDPKVVEYILKNGNVVV---E-DDDNIINIMPLFPTLSIHESDVLSILKLCKPY- 399 (631)
T ss_pred ------------------HHHHHHcCCHHHHHHHHHcCCchh---h-hcCCCCChhHHHHHHHhccHhHHHHHHHHHhc-
Confidence 112223344445555444333332 2 3333 57999998877664 468888999
Q ss_pred CCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhh
Q 006942 335 DSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGR 390 (624)
Q Consensus 335 ~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~ 390 (624)
+++++..|..|+||||+|+..++.+++++|+++| ..+|.+|..|+||||+|+.
T Consensus 400 GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~G---ADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 400 IDDINKIDKHGRSILYYCIESHSVSLVEWLIDNG---ADINITTKYGSTCIGICVI 452 (631)
T ss_pred CCccccccccCcchHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHH
Confidence 9998877999999999999999999999999998 6688999999999999986
|
|
| >PHA02859 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.9e-25 Score=211.04 Aligned_cols=138 Identities=17% Similarity=0.173 Sum_probs=116.9
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcC--CHHHHHHHHhcCCCCcccCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKG--NLRALKLLVKYNPDLTNIRH 103 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g--~~~iv~~Ll~~~~~l~~~~n 103 (624)
.+.+ .||||.|+. .| +.+.|+.|++.. +..|..|.||||+|+..+ +.+++++|++++++ ++.++
T Consensus 18 ~~~~-~~pL~~A~~----~~---~~~~vk~Li~~~-----n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gad-vn~~~ 83 (209)
T PHA02859 18 FYRY-CNPLFYYVE----KD---DIEGVKKWIKFV-----NDCNDLYETPIFSCLEKDKVNVEILKFLIENGAD-VNFKT 83 (209)
T ss_pred hhcc-CcHHHHHHH----hC---cHHHHHHHHHhh-----hccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCC-CCccC
Confidence 5667 899999999 99 999999999763 667899999999999754 89999999999998 66775
Q ss_pred -CCCChHHHHHHHc---CCHHHHHHHHHhcCCCccccCCCCCcHHHHHHH--hCcHHHHHHHHHhCCCCCcccCCCCCCH
Q 006942 104 -GEGFLPVHDAALY---GHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIA--ANLYDVALDLLKRHPTIGRDSIDSRRII 177 (624)
Q Consensus 104 -~~G~TPLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~--~~~~~~v~~Ll~~~~~l~~~~d~~G~Tp 177 (624)
..|.||||+|+.. ++.+++++|++++++.+. +|.+|.||||.|+. .++.++++.|++.+.++ +.+|.+|.||
T Consensus 84 ~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~-~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadi-n~~d~~g~t~ 161 (209)
T PHA02859 84 RDNNLSALHHYLSFNKNVEPEILKILIDSGSSITE-EDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSF-LNKDFDNNNI 161 (209)
T ss_pred CCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc-ccccCCCCcH
Confidence 5899999998864 479999999999999998 99999999999986 46899999999887664 3344445555
Q ss_pred HH
Q 006942 178 LN 179 (624)
Q Consensus 178 Lh 179 (624)
||
T Consensus 162 Lh 163 (209)
T PHA02859 162 LY 163 (209)
T ss_pred HH
Confidence 44
|
|
| >TIGR00870 trp transient-receptor-potential calcium channel protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-23 Score=237.04 Aligned_cols=230 Identities=17% Similarity=0.113 Sum_probs=173.2
Q ss_pred CCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHH-HHHHcCCHHHHHHHHhcCCCCcccCCCCC
Q 006942 28 PGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAAT-LSAAKGNLRALKLLVKYNPDLTNIRHGEG 106 (624)
Q Consensus 28 ~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh-~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G 106 (624)
.+ +++++.||+ .| +.+.|+.+++.....++|..|..|.|||| .|+.+++.+++++|++.+. .+..|
T Consensus 16 ~~-~~~~l~A~~----~g---~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G 82 (743)
T TIGR00870 16 DE-EKAFLPAAE----RG---DLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVG 82 (743)
T ss_pred HH-HHHHHHHHH----cC---CHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcC
Confidence 55 899999999 99 99999999998545778899999999999 8889999999999999876 57789
Q ss_pred ChHHHHHHHcC---CHHHHHHHHHhcCCCc---------cccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCC
Q 006942 107 FLPVHDAALYG---HKDTFHYLLEVTHGVD---------IYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSR 174 (624)
Q Consensus 107 ~TPLh~Aa~~g---~~~iv~~Ll~~~~~~~---------~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G 174 (624)
+||||.|+..+ ..++++.+........ ...+..|.||||+|+.+|+.++++.|++++.++.. ++. |
T Consensus 83 ~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~-~~~-~ 160 (743)
T TIGR00870 83 DTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPA-RAC-G 160 (743)
T ss_pred hHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc-CcC-C
Confidence 99999999732 2344444544443211 00345799999999999999999999999876631 111 0
Q ss_pred CCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhh
Q 006942 175 RIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTF 254 (624)
Q Consensus 175 ~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (624)
.... .
T Consensus 161 ~~~~-----~---------------------------------------------------------------------- 165 (743)
T TIGR00870 161 DFFV-----K---------------------------------------------------------------------- 165 (743)
T ss_pred chhh-----c----------------------------------------------------------------------
Confidence 0000 0
Q ss_pred hhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHcc
Q 006942 255 GAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAY 334 (624)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~ 334 (624)
.. .......|.||||.|+..|+.++++.|++.
T Consensus 166 ---------------------------------------------~~--~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~- 197 (743)
T TIGR00870 166 ---------------------------------------------SQ--GVDSFYHGESPLNAAACLGSPSIVALLSED- 197 (743)
T ss_pred ---------------------------------------------CC--CCCcccccccHHHHHHHhCCHHHHHHHhcC-
Confidence 00 000234578999999999999999999998
Q ss_pred CCCceecCCCCCcHHHHHHHcC---------ChhHHHHHhcCC----ccccccccccCCCCchhhhhhhcCCCC
Q 006942 335 DSSSNWSNQDGHTIFDHAVLYR---------REKVFNLIQGVN----FTTFLFSSRDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 335 ~~d~~~~d~~G~T~Lh~A~~~~---------~~~iv~~Ll~~~----~~~~~vn~~D~~GnTpLHlAa~~~~~~ 395 (624)
++|++..|..|+||||+|+..+ ...+.+++++.+ +...+.+.+|++|+||||+|++.|+.+
T Consensus 198 gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~ 271 (743)
T TIGR00870 198 PADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIV 271 (743)
T ss_pred CcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCcc
Confidence 8777666999999999999986 233556666554 222233678999999999999999876
|
after chronic exposure to capsaicin. (McCleskey and Gold, 1999). |
| >KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=226.10 Aligned_cols=245 Identities=20% Similarity=0.220 Sum_probs=206.0
Q ss_pred CccCCCHHHHHHHHHcC------------ccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccC
Q 006942 1 MIEKNDWQGVEDFVTNH------------PDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQ 68 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~------------~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~ 68 (624)
|++.||.+.+..+|+.. +...+.. |.+| .|+||.||. +| +.++++.|+++. +.++..
T Consensus 10 a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~q-d~~g-fTalhha~L----ng---~~~is~llle~e--a~ldl~ 78 (854)
T KOG0507|consen 10 ACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQ-DYSG-FTLLHHAVL----NG---QNQISKLLLDYE--ALLDLC 78 (854)
T ss_pred hhhcccHHHHHHhccCCCCCCCCCCCCCCCcccccc-Cccc-hhHHHHHHh----cC---chHHHHHHhcch--hhhhhh
Confidence 67889999999999863 2345555 7789 999999999 99 999999999984 778888
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q 006942 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLI 148 (624)
Q Consensus 69 d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~ 148 (624)
|..|.+|||+|+..|+.++||.++..+. .++..+..|+||||.|+..||.+++.+|+.++++... +|+.+.|+|-.|+
T Consensus 79 d~kg~~plhlaaw~g~~e~vkmll~q~d-~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i-~nns~~t~ldlA~ 156 (854)
T KOG0507|consen 79 DTKGILPLHLAAWNGNLEIVKMLLLQTD-ILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFI-RNNSKETVLDLAS 156 (854)
T ss_pred hccCcceEEehhhcCcchHHHHHHhccc-CCCcccccCcCccchhhhhcchHHHHHHHhcCCCccc-cCcccccHHHHHH
Confidence 8999999999999999999999999984 4889999999999999999999999999999999988 9999999999999
Q ss_pred HhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcch
Q 006942 149 AANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIE 228 (624)
Q Consensus 149 ~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (624)
+-|..++++.|+.. ++....+. ..|
T Consensus 157 qfgr~~Vvq~ll~~--~~~~~~~~----------~~~------------------------------------------- 181 (854)
T KOG0507|consen 157 RFGRAEVVQMLLQK--KFPVQSSL----------RVG------------------------------------------- 181 (854)
T ss_pred HhhhhHHHHHHhhh--ccchhhcc----------cCC-------------------------------------------
Confidence 99999999999987 32211100 000
Q ss_pred hhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCC
Q 006942 229 SFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNS 308 (624)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~ 308 (624)
...++
T Consensus 182 ---------------------------------------------------------------------------~~~~~ 186 (854)
T KOG0507|consen 182 ---------------------------------------------------------------------------DIKRP 186 (854)
T ss_pred ---------------------------------------------------------------------------CCCCC
Confidence 00134
Q ss_pred ccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhh
Q 006942 309 AQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLA 388 (624)
Q Consensus 309 ~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlA 388 (624)
-.+-+|||.|+++|+.++++.|++. +-|++...++ -|+||.|+.+|+.++|.+|++.+ .....+|.+|.|+|.+-
T Consensus 187 ~~~~~plHlaakngh~~~~~~ll~a-g~din~~t~~-gtalheaalcgk~evvr~ll~~g---in~h~~n~~~qtaldil 261 (854)
T KOG0507|consen 187 FPAIYPLHLAAKNGHVECMQALLEA-GFDINYTTED-GTALHEAALCGKAEVVRFLLEIG---INTHIKNQHGQTALDII 261 (854)
T ss_pred CCCcCCcchhhhcchHHHHHHHHhc-CCCccccccc-chhhhhHhhcCcchhhhHHHhhc---cccccccccchHHHHHH
Confidence 4557899999999999999999999 7777655544 48999999999999999999998 44558999999999988
Q ss_pred hhcCC
Q 006942 389 GRLVP 393 (624)
Q Consensus 389 a~~~~ 393 (624)
...-.
T Consensus 262 ~d~~~ 266 (854)
T KOG0507|consen 262 IDLQE 266 (854)
T ss_pred Hhcch
Confidence 76644
|
|
| >KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-24 Score=194.32 Aligned_cols=228 Identities=18% Similarity=0.157 Sum_probs=193.7
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|...|+-+.++..+.-++..+..+ +++| .+++|.|+- +| +.+.+..++..+ ...|..+-.+.+|+.+++
T Consensus 69 ~~~s~nsd~~v~s~~~~~~~~~~t-~p~g-~~~~~v~ap----~~---s~~k~sttltN~--~rgnevs~~p~s~~slsV 137 (296)
T KOG0502|consen 69 AVRSGNSDVAVQSAQLDPDAIDET-DPEG-WSALLVAAP----CG---SVDKVSTTLTNG--ARGNEVSLMPWSPLSLSV 137 (296)
T ss_pred hhhcCCcHHHHHhhccCCCCCCCC-Cchh-hhhhhhcCC----CC---Ccceeeeeeccc--ccCCccccccCChhhHHH
Confidence 345677888888877788777777 7889 999999999 99 999999999876 556778888999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLL 160 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll 160 (624)
...+++.+..+.+.. ++.+|+.|.|||.||+..||.++|++|++.|+++.. ..+...++|..|++.|..|+|+.|+
T Consensus 138 hql~L~~~~~~~~n~---VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~-lgk~resALsLAt~ggytdiV~lLL 213 (296)
T KOG0502|consen 138 HQLHLDVVDLLVNNK---VNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDA-LGKYRESALSLATRGGYTDIVELLL 213 (296)
T ss_pred HHHHHHHHHHHhhcc---ccCccccCchHhHHHHhcCchHHHHHHHHcCCChhh-hhhhhhhhHhHHhcCChHHHHHHHH
Confidence 999999888876644 558999999999999999999999999999999998 8999999999999999999999999
Q ss_pred HhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcc
Q 006942 161 KRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKE 240 (624)
Q Consensus 161 ~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (624)
.+.+++ +..
T Consensus 214 ~r~vdV-Nvy---------------------------------------------------------------------- 222 (296)
T KOG0502|consen 214 TREVDV-NVY---------------------------------------------------------------------- 222 (296)
T ss_pred hcCCCc-cee----------------------------------------------------------------------
Confidence 998875 222
Q ss_pred cccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHH
Q 006942 241 STRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAI 320 (624)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~ 320 (624)
|-+|.|||.+|++
T Consensus 223 -------------------------------------------------------------------DwNGgTpLlyAvr 235 (296)
T KOG0502|consen 223 -------------------------------------------------------------------DWNGGTPLLYAVR 235 (296)
T ss_pred -------------------------------------------------------------------ccCCCceeeeeec
Confidence 3345666666777
Q ss_pred cCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhh
Q 006942 321 LGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILH 386 (624)
Q Consensus 321 ~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLH 386 (624)
.|++++|+.||+. |+|....|..|.+++..|+..|.. +|+.+++.- .+.+-+|+.-.||||
T Consensus 236 gnhvkcve~Ll~s-GAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h---~lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 236 GNHVKCVESLLNS-GADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKH---ALKLCQDSEKRTPLH 296 (296)
T ss_pred CChHHHHHHHHhc-CCCcccccccCCcHHHHHHHhhhH-HHHHHHHHH---HHHHhhcccCCCCCC
Confidence 7888999999999 998887799999999999999986 788888765 556688988899987
|
|
| >TIGR00870 trp transient-receptor-potential calcium channel protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-21 Score=222.74 Aligned_cols=168 Identities=17% Similarity=0.088 Sum_probs=134.2
Q ss_pred CccCCCHHHHHHHHHcC-ccccccccCCCCCchHHH-HHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHH
Q 006942 1 MIEKNDWQGVEDFVTNH-PDALTAKIVEPGSMTIFH-MIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATL 78 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~-~~~~~~~~~~~g~~T~Lh-~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~ 78 (624)
||++||.+.++.++++. +.+++.. |..| +|||| .|+. .+ +.++++.|++.+. .+..|.||||.
T Consensus 24 A~~~g~~~~v~~lL~~~~~~~in~~-d~~G-~t~Lh~~A~~----~~---~~eiv~lLl~~g~------~~~~G~T~Lh~ 88 (743)
T TIGR00870 24 AAERGDLASVYRDLEEPKKLNINCP-DRLG-RSALFVAAIE----NE---NLELTELLLNLSC------RGAVGDTLLHA 88 (743)
T ss_pred HHHcCCHHHHHHHhccccccCCCCc-Cccc-hhHHHHHHHh----cC---hHHHHHHHHhCCC------CCCcChHHHHH
Confidence 68999999999999873 3345555 8899 99999 8888 88 9999999999973 68899999999
Q ss_pred HHHcCCHH----HHHHHHhcCCC-----Cc----ccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccc----------
Q 006942 79 SAAKGNLR----ALKLLVKYNPD-----LT----NIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIY---------- 135 (624)
Q Consensus 79 Aa~~g~~~----iv~~Ll~~~~~-----l~----~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~---------- 135 (624)
|+. |+.+ +++.+.+.+++ +. ...+..|.||||+||.+|+.++|++|+++|++++..
T Consensus 89 A~~-~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~ 167 (743)
T TIGR00870 89 ISL-EYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQ 167 (743)
T ss_pred HHh-ccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCC
Confidence 987 3333 34444443332 11 123457999999999999999999999999887641
Q ss_pred ---cCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCC
Q 006942 136 ---SGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185 (624)
Q Consensus 136 ---~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~ 185 (624)
....|.||||.|+..|+.++++.|++.+.++ +.+|..|+||||+|+..+
T Consensus 168 ~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi-n~~d~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 168 GVDSFYHGESPLNAAACLGSPSIVALLSEDPADI-LTADSLGNTLLHLLVMEN 219 (743)
T ss_pred CCCcccccccHHHHHHHhCCHHHHHHHhcCCcch-hhHhhhhhHHHHHHHhhh
Confidence 1246899999999999999999999987654 678999999999999763
|
after chronic exposure to capsaicin. (McCleskey and Gold, 1999). |
| >PHA02795 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-23 Score=212.26 Aligned_cols=195 Identities=11% Similarity=-0.056 Sum_probs=166.3
Q ss_pred HHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcc------cCCCCCChHHHHHHH--cCCHHHHHH
Q 006942 53 LDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTN------IRHGEGFLPVHDAAL--YGHKDTFHY 124 (624)
Q Consensus 53 v~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~------~~n~~G~TPLh~Aa~--~g~~~iv~~ 124 (624)
-++++.+| .+++.++.+| +|+..+..|++++|+.++.+ ++ .++..++|+||.|+. .|+.++|++
T Consensus 65 ~~~~~~~~--~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~-~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~ 136 (437)
T PHA02795 65 YDYFRIHR--DNIDQYIVDR-----LFAYITYKDIISALVSKNYM-EDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDF 136 (437)
T ss_pred HHHHHHcC--cchhhhhhhh-----HHhhcchHHHHHHHHhcccc-cchhhhhhhccccccHHHHHHHHhcCCCHHHHHH
Confidence 46677776 5667777666 99999999999999999887 33 577889999999999 899999999
Q ss_pred HHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhcc
Q 006942 125 LLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNC 204 (624)
Q Consensus 125 Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~ 204 (624)
|+++|++.+. .++.||||.|+..++.++++.|+.++.+. +..+.+|++-
T Consensus 137 LI~~GADIn~---~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~----~n~~~~~l~~------------------------ 185 (437)
T PHA02795 137 MVDHGAVIYK---IECLNAYFRGICKKESSVVEFILNCGIPD----ENDVKLDLYK------------------------ 185 (437)
T ss_pred HHHCCCCCCC---CCCCCHHHHHHHcCcHHHHHHHHhcCCcc----cccccchhhh------------------------
Confidence 9999999865 35589999999999999999999987532 1222333321
Q ss_pred ccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhh
Q 006942 205 IPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKL 284 (624)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 284 (624)
T Consensus 186 -------------------------------------------------------------------------------- 185 (437)
T PHA02795 186 -------------------------------------------------------------------------------- 185 (437)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHH
Q 006942 285 THMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLI 364 (624)
Q Consensus 285 ~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~L 364 (624)
..+.||+|.|+..++.++++.|+++ |++++..|..|+||||+|+.+|+.+++++|
T Consensus 186 ------------------------~~~~t~l~~a~~~~~~eIve~LIs~-GADIN~kD~~G~TpLh~Aa~~g~~eiVelL 240 (437)
T PHA02795 186 ------------------------IIQYTRGFLVDEPTVLEIYKLCIPY-IEDINQLDAGGRTLLYRAIYAGYIDLVSWL 240 (437)
T ss_pred ------------------------hhccchhHHHHhcCHHHHHHHHHhC-cCCcCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 1236899999999999999999999 999887799999999999999999999999
Q ss_pred hcCCccccccccccCCCCchhhhhhhcCCC
Q 006942 365 QGVNFTTFLFSSRDKAGNNILHLAGRLVPS 394 (624)
Q Consensus 365 l~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 394 (624)
++.| ..+|.+|..|.||||+|+..|+.
T Consensus 241 L~~G---AdIN~~d~~G~TpLh~Aa~~g~~ 267 (437)
T PHA02795 241 LENG---ANVNAVMSNGYTCLDVAVDRGSV 267 (437)
T ss_pred HHCC---CCCCCcCCCCCCHHHHHHHcCCc
Confidence 9999 67889999999999999999964
|
|
| >PHA02795 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-23 Score=211.76 Aligned_cols=182 Identities=10% Similarity=-0.012 Sum_probs=153.7
Q ss_pred HHHhhhhhcCCcchHHHHHHHHHccCchhhc------cCCCCCChHHHHHHH--cCCHHHHHHHHhcCCCCcccCCCCCC
Q 006942 36 MIVELLIDAESDEAICLLDKLASKVDPETLA------RQDNHGHTAATLSAA--KGNLRALKLLVKYNPDLTNIRHGEGF 107 (624)
Q Consensus 36 ~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~------~~d~~G~TpLh~Aa~--~g~~~iv~~Ll~~~~~l~~~~n~~G~ 107 (624)
+|+. .+ ..|+++.|+.++ ++++ .+++.++|+||+|+. .|+.++|++|+++|++ ++. .++.
T Consensus 83 ~~~~----~~---~k~~~~~l~s~~--~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GAD-In~--~~~~ 150 (437)
T PHA02795 83 LFAY----IT---YKDIISALVSKN--YMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAV-IYK--IECL 150 (437)
T ss_pred HHhh----cc---hHHHHHHHHhcc--cccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCC-CCC--CCCC
Confidence 8999 99 999999999998 4444 688889999999998 9999999999999999 454 3568
Q ss_pred hHHHHHHHcCCHHHHHHHHHhcCCCcccc-----CCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 006942 108 LPVHDAALYGHKDTFHYLLEVTHGVDIYS-----GKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLA 182 (624)
Q Consensus 108 TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~-----~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa 182 (624)
||+|.|+..|+.+++++|+++|+...... +..|.|++|.|...++.++++.|++.++++ +.
T Consensus 151 t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADI-N~------------- 216 (437)
T PHA02795 151 NAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDI-NQ------------- 216 (437)
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCc-Cc-------------
Confidence 99999999999999999999997543211 234778899999999999999999877654 22
Q ss_pred cCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHH
Q 006942 183 QKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLH 262 (624)
Q Consensus 183 ~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (624)
T Consensus 217 -------------------------------------------------------------------------------- 216 (437)
T PHA02795 217 -------------------------------------------------------------------------------- 216 (437)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecC
Q 006942 263 RMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSN 342 (624)
Q Consensus 263 ~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d 342 (624)
.+..|.||||+|+..|+.++++.|+++ |+++...|
T Consensus 217 --------------------------------------------kD~~G~TpLh~Aa~~g~~eiVelLL~~-GAdIN~~d 251 (437)
T PHA02795 217 --------------------------------------------LDAGGRTLLYRAIYAGYIDLVSWLLEN-GANVNAVM 251 (437)
T ss_pred --------------------------------------------CCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcC
Confidence 455667777777788889999999999 99888779
Q ss_pred CCCCcHHHHHHHcCC--------hhHHHHHhcCC
Q 006942 343 QDGHTIFDHAVLYRR--------EKVFNLIQGVN 368 (624)
Q Consensus 343 ~~G~T~Lh~A~~~~~--------~~iv~~Ll~~~ 368 (624)
..|+||||+|+.+|+ .+++++|++.+
T Consensus 252 ~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~g 285 (437)
T PHA02795 252 SNGYTCLDVAVDRGSVIARRETHLKILEILLREP 285 (437)
T ss_pred CCCCCHHHHHHHcCCcccccccHHHHHHHHHhCC
Confidence 999999999999884 68999999887
|
|
| >PF13962 PGG: Domain of unknown function | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=178.97 Aligned_cols=108 Identities=39% Similarity=0.650 Sum_probs=96.3
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHhhhcCCCCCCC----CCCccccCCc-hhhHHHHHHHHHHHHHHHHHHHHHhHhccc
Q 006942 449 EKWLKETASSCSVVAALIITVVFAAVFTAPGGSDG----RGMPNFLHDQ-SFMIFAISDMLALFSSITSVLMFLGILTSR 523 (624)
Q Consensus 449 ~~~~~~~~~~~~vva~Liatv~f~a~~t~Pgg~~~----~G~~~~~~~~-~f~~f~~~~~~a~~~S~~~~~~~~~~~~~~ 523 (624)
+||++++++++++||+|||||||+|+||||||++| .|+|++.+++ .|++|+++|++||++|+++++++++.+
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~--- 77 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGL--- 77 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 47999999999999999999999999999999977 6999998887 999999999999999999998877422
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006942 524 YAEEDFLVSLPKKLIIGLITLFFSIASMMVAFGATVHIS 562 (624)
Q Consensus 524 ~~~~~~~~~l~~~l~~~~~~l~~s~~~m~~af~~~~~~v 562 (624)
.++.+..++.+.++..++++++.+|++||++|+++|
T Consensus 78 ---~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 78 ---DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 445566666778889999999999999999999875
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=233.25 Aligned_cols=179 Identities=19% Similarity=0.139 Sum_probs=156.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHH
Q 006942 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFL 147 (624)
Q Consensus 68 ~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A 147 (624)
.+.++.++||.||..|+.++++.|++.+.+ ++.+|.+|.||||+||..|+.+++++|++++++.+. +|.+|.||||.|
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d-~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~-~d~~G~TpL~~A 598 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELLKAKLD-PDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHI-RDANGNTALWNA 598 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCC-cCCCCCCHHHHH
Confidence 455678999999999999999999999888 788999999999999999999999999999999888 899999999999
Q ss_pred HHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcc
Q 006942 148 IAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDI 227 (624)
Q Consensus 148 ~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (624)
+..|+.++++.|++.....
T Consensus 599 ~~~g~~~iv~~L~~~~~~~------------------------------------------------------------- 617 (823)
T PLN03192 599 ISAKHHKIFRILYHFASIS------------------------------------------------------------- 617 (823)
T ss_pred HHhCCHHHHHHHHhcCccc-------------------------------------------------------------
Confidence 9999999999987532110
Q ss_pred hhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccC
Q 006942 228 ESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQN 307 (624)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~ 307 (624)
+
T Consensus 618 -------------------------------------------------------------------------------~ 618 (823)
T PLN03192 618 -------------------------------------------------------------------------------D 618 (823)
T ss_pred -------------------------------------------------------------------------------C
Confidence 1
Q ss_pred CccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCC-Cchhh
Q 006942 308 SAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAG-NNILH 386 (624)
Q Consensus 308 ~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~G-nTpLH 386 (624)
...|.+|||.|+.+|+.++++.|+++ |++++..|.+|+||||+|+..|+.+++++|++.| .+++.+|..| .||++
T Consensus 619 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~-Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~G---Adv~~~~~~g~~t~~~ 694 (823)
T PLN03192 619 PHAAGDLLCTAAKRNDLTAMKELLKQ-GLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNG---ADVDKANTDDDFSPTE 694 (823)
T ss_pred cccCchHHHHHHHhCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcC---CCCCCCCCCCCCCHHH
Confidence 22346899999999999999999999 9998767999999999999999999999999998 5677999888 99999
Q ss_pred hhhhcC
Q 006942 387 LAGRLV 392 (624)
Q Consensus 387 lAa~~~ 392 (624)
++....
T Consensus 695 l~~~~~ 700 (823)
T PLN03192 695 LRELLQ 700 (823)
T ss_pred HHHHHH
Confidence 886654
|
|
| >KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.3e-22 Score=207.02 Aligned_cols=253 Identities=17% Similarity=0.134 Sum_probs=196.8
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccC-----------chhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCc
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVD-----------PETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLT 99 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~-----------~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~ 99 (624)
.+=|--|+. .| +.+.|..|++... +...+.+|.+|.|+||.||.+|+.+++++|++..+- +
T Consensus 4 ~qel~~a~k----a~---d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~-l 75 (854)
T KOG0507|consen 4 KQELIDACK----AG---DYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEAL-L 75 (854)
T ss_pred hhhHHHhhh----cc---cHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhh-h
Confidence 455778999 99 9999999998732 245788999999999999999999999999999886 7
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHH
Q 006942 100 NIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILN 179 (624)
Q Consensus 100 ~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh 179 (624)
..++.+|.+|||+|++.|+.|+++.|+..+...+. .+.+|.||||.|+..|+.|++.+|++++.+- ..+|.++.|+|.
T Consensus 76 dl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na-~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp-~i~nns~~t~ld 153 (854)
T KOG0507|consen 76 DLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNA-VNIENETPLHLAAQHGHLEVVFYLLKKNADP-FIRNNSKETVLD 153 (854)
T ss_pred hhhhccCcceEEehhhcCcchHHHHHHhcccCCCc-ccccCcCccchhhhhcchHHHHHHHhcCCCc-cccCcccccHHH
Confidence 78889999999999999999999999999988887 8999999999999999999999999987764 556777778888
Q ss_pred HHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhH
Q 006942 180 TLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLH 259 (624)
Q Consensus 180 ~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (624)
+|++.|.+
T Consensus 154 lA~qfgr~------------------------------------------------------------------------ 161 (854)
T KOG0507|consen 154 LASRFGRA------------------------------------------------------------------------ 161 (854)
T ss_pred HHHHhhhh------------------------------------------------------------------------
Confidence 77765421
Q ss_pred HHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCce
Q 006942 260 KLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSN 339 (624)
Q Consensus 260 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~ 339 (624)
+++++|..- +. .+..+... + ..
T Consensus 162 ----------------------------~Vvq~ll~~--~~-------------------------~~~~~~~~-~--~~ 183 (854)
T KOG0507|consen 162 ----------------------------EVVQMLLQK--KF-------------------------PVQSSLRV-G--DI 183 (854)
T ss_pred ----------------------------HHHHHHhhh--cc-------------------------chhhcccC-C--CC
Confidence 012221110 00 00112222 2 22
Q ss_pred ecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcC
Q 006942 340 WSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVH 419 (624)
Q Consensus 340 ~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~ 419 (624)
..+-.+-+|||+|+++||.++++.|+..| ..+|...++| |+||-|+-.|..++ |..++.
T Consensus 184 ~~~~~~~~plHlaakngh~~~~~~ll~ag---~din~~t~~g-talheaalcgk~ev-----------------vr~ll~ 242 (854)
T KOG0507|consen 184 KRPFPAIYPLHLAAKNGHVECMQALLEAG---FDINYTTEDG-TALHEAALCGKAEV-----------------VRFLLE 242 (854)
T ss_pred CCCCCCcCCcchhhhcchHHHHHHHHhcC---CCcccccccc-hhhhhHhhcCcchh-----------------hhHHHh
Confidence 22778899999999999999999999999 5566777766 99999999998663 222222
Q ss_pred c-ccccccCCCCCChhhhhhHHHHHh
Q 006942 420 P-FFREATNDLKQTPREVFTEEHKEL 444 (624)
Q Consensus 420 ~-~~~~~~N~~G~Tp~dl~~~~~~~l 444 (624)
. ....++|.+|+|++|+..+...+.
T Consensus 243 ~gin~h~~n~~~qtaldil~d~~~~~ 268 (854)
T KOG0507|consen 243 IGINTHIKNQHGQTALDIIIDLQENR 268 (854)
T ss_pred hccccccccccchHHHHHHHhcchhh
Confidence 1 347889999999999977654433
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-21 Score=223.30 Aligned_cols=127 Identities=19% Similarity=0.205 Sum_probs=115.7
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
+.++ .++||.||. .| +.++++.|++.| .+++..|.+|.||||+||..|+.+++++|++++++ ++.+|.+
T Consensus 522 ~~~~-~~~L~~Aa~----~g---~~~~l~~Ll~~G--~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad-in~~d~~ 590 (823)
T PLN03192 522 DPNM-ASNLLTVAS----TG---NAALLEELLKAK--LDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACN-VHIRDAN 590 (823)
T ss_pred Cccc-hhHHHHHHH----cC---CHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCC-CCCcCCC
Confidence 4467 899999999 99 999999999997 67899999999999999999999999999999988 8899999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCC
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTI 166 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l 166 (624)
|.||||+|+..||.+++++|++.++..+ ...|.++||.|+.+|+.++++.|++++.++
T Consensus 591 G~TpL~~A~~~g~~~iv~~L~~~~~~~~---~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadi 648 (823)
T PLN03192 591 GNTALWNAISAKHHKIFRILYHFASISD---PHAAGDLLCTAAKRNDLTAMKELLKQGLNV 648 (823)
T ss_pred CCCHHHHHHHhCCHHHHHHHHhcCcccC---cccCchHHHHHHHhCCHHHHHHHHHCCCCC
Confidence 9999999999999999999998776543 456779999999999999999999886654
|
|
| >KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-21 Score=174.16 Aligned_cols=241 Identities=17% Similarity=0.053 Sum_probs=198.9
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPV 110 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPL 110 (624)
-..|..++. .| -.+.-+.|.... -..++..|..-+-.+.+.|+.++++.++.-+|+-+.-.+.+|.+++
T Consensus 32 ~a~~~~~~~----m~---~t~p~~~l~~~~----s~~~~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~ 100 (296)
T KOG0502|consen 32 IAELFEQVE----MG---TTEPRCALTAEI----SALRNALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSAL 100 (296)
T ss_pred HHHHHHHhh----cc---ccchhHHHHHHH----HHHHHhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhh
Confidence 467788888 77 666666666553 1234566777788899999999999999888887778888899999
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCC
Q 006942 111 HDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFAS 190 (624)
Q Consensus 111 h~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~ 190 (624)
|.|+-.|+.+.+..++.+++..+. .+--+++|+.+++...+.+++..+.++ ..+..|+.|.|||.+|+.+|.
T Consensus 101 ~v~ap~~s~~k~sttltN~~rgne-vs~~p~s~~slsVhql~L~~~~~~~~n---~VN~~De~GfTpLiWAaa~G~---- 172 (296)
T KOG0502|consen 101 LVAAPCGSVDKVSTTLTNGARGNE-VSLMPWSPLSLSVHQLHLDVVDLLVNN---KVNACDEFGFTPLIWAAAKGH---- 172 (296)
T ss_pred hhcCCCCCcceeeeeecccccCCc-cccccCChhhHHHHHHHHHHHHHHhhc---cccCccccCchHhHHHHhcCc----
Confidence 999999999999999999998887 888999999999999988888776654 457789999999999998852
Q ss_pred CCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccC
Q 006942 191 GSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXM 270 (624)
Q Consensus 191 ~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (624)
T Consensus 173 -------------------------------------------------------------------------------- 172 (296)
T KOG0502|consen 173 -------------------------------------------------------------------------------- 172 (296)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHH
Q 006942 271 HLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFD 350 (624)
Q Consensus 271 ~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh 350 (624)
...+++|.....+.. . -..+-.++|..|++.|..++|++||.+ ++|++..|-+|-|||.
T Consensus 173 ----------------i~vV~fLL~~GAdp~---~-lgk~resALsLAt~ggytdiV~lLL~r-~vdVNvyDwNGgTpLl 231 (296)
T KOG0502|consen 173 ----------------IPVVQFLLNSGADPD---A-LGKYRESALSLATRGGYTDIVELLLTR-EVDVNVYDWNGGTPLL 231 (296)
T ss_pred ----------------hHHHHHHHHcCCChh---h-hhhhhhhhHhHHhcCChHHHHHHHHhc-CCCcceeccCCCceee
Confidence 223444333222211 1 233448999999999999999999999 9999877999999999
Q ss_pred HHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCC
Q 006942 351 HAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPS 394 (624)
Q Consensus 351 ~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 394 (624)
+|++.++.++++.|+..| .+++..|..|++++.+|+..|+.
T Consensus 232 yAvrgnhvkcve~Ll~sG---Ad~t~e~dsGy~~mdlAValGyr 272 (296)
T KOG0502|consen 232 YAVRGNHVKCVESLLNSG---ADVTQEDDSGYWIMDLAVALGYR 272 (296)
T ss_pred eeecCChHHHHHHHHhcC---CCcccccccCCcHHHHHHHhhhH
Confidence 999999999999999999 67789999999999999999984
|
|
| >KOG0514 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.6e-21 Score=183.00 Aligned_cols=182 Identities=18% Similarity=0.239 Sum_probs=142.0
Q ss_pred CcchHHHHHHHHHccC---c----hhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHc--
Q 006942 46 SDEAICLLDKLASKVD---P----ETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALY-- 116 (624)
Q Consensus 46 ~~~~~~iv~~Ll~~~~---~----~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~-- 116 (624)
++-+.+.|+.-+..+. + ..+|..|.+|||+||||+.++++++|+.||+.+-..++..|+.|.||+++|+..
T Consensus 235 s~a~pe~V~~~l~~f~als~~lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~l 314 (452)
T KOG0514|consen 235 SSSDPEQVEDYLAYFEALSPPLLEYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKL 314 (452)
T ss_pred CCCCHHHHHHHHHHHHhcChHHHHHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhh
Confidence 3447788876655431 1 237889999999999999999999999999998877999999999999999864
Q ss_pred ---CCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCc
Q 006942 117 ---GHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSR 193 (624)
Q Consensus 117 ---g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~ 193 (624)
.+.++|..|...+..... ....|+|+|++|+.+|+.|+++.||..+.++ +
T Consensus 315 k~~~d~~vV~~LF~mgnVNaK-AsQ~gQTALMLAVSHGr~d~vk~LLacgAdV-N------------------------- 367 (452)
T KOG0514|consen 315 KQPADRTVVERLFKMGDVNAK-ASQHGQTALMLAVSHGRVDMVKALLACGADV-N------------------------- 367 (452)
T ss_pred cchhhHHHHHHHHhccCcchh-hhhhcchhhhhhhhcCcHHHHHHHHHccCCC-c-------------------------
Confidence 356788888776643332 5677888888888888888888888776654 1
Q ss_pred chhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCC
Q 006942 194 LGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLS 273 (624)
Q Consensus 194 l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (624)
T Consensus 368 -------------------------------------------------------------------------------- 367 (452)
T KOG0514|consen 368 -------------------------------------------------------------------------------- 367 (452)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceec--CCCCCcHHHH
Q 006942 274 PGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWS--NQDGHTIFDH 351 (624)
Q Consensus 274 ~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~--d~~G~T~Lh~ 351 (624)
. .|++|.|+|++||++||.||++.||.. |.++.. |.+|.|+|.+
T Consensus 368 -------------------------------i-QDdDGSTALMCA~EHGhkEivklLLA~--p~cd~sLtD~DgSTAl~I 413 (452)
T KOG0514|consen 368 -------------------------------I-QDDDGSTALMCAAEHGHKEIVKLLLAV--PSCDISLTDVDGSTALSI 413 (452)
T ss_pred -------------------------------c-ccCCccHHHhhhhhhChHHHHHHHhcc--CcccceeecCCCchhhhh
Confidence 1 456678888888888888888888876 555444 8888888888
Q ss_pred HHHcCChhHHHHHhcCC
Q 006942 352 AVLYRREKVFNLIQGVN 368 (624)
Q Consensus 352 A~~~~~~~iv~~Ll~~~ 368 (624)
|-..||.||.-+|+.+.
T Consensus 414 Aleagh~eIa~mlYa~~ 430 (452)
T KOG0514|consen 414 ALEAGHREIAVMLYAHM 430 (452)
T ss_pred HHhcCchHHHHHHHHHH
Confidence 88888888888887543
|
|
| >KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.8e-21 Score=203.80 Aligned_cols=149 Identities=13% Similarity=0.060 Sum_probs=132.7
Q ss_pred CCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCC
Q 006942 27 EPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEG 106 (624)
Q Consensus 27 ~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G 106 (624)
.+- +|+|-.||+ .| |.|+|++|+..| +++..+|+.|.+||.+|+-.||..+|+.|+.+..++-...|+.+
T Consensus 755 ~n~-~t~LT~aca----gg---h~e~vellv~rg--aniehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtk 824 (2131)
T KOG4369|consen 755 PNI-KTNLTSACA----GG---HREEVELLVVRG--ANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTK 824 (2131)
T ss_pred ccc-ccccccccc----Cc---cHHHHHHHHHhc--ccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhccccc
Confidence 344 899999999 99 999999999997 78889999999999999999999999999999888666788999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccC-CCCCCHHHHHHcCC
Q 006942 107 FLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSI-DSRRIILNTLAQKP 185 (624)
Q Consensus 107 ~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d-~~G~TpLh~Aa~~~ 185 (624)
+|+|-+||..|+.++|+.||..+++... ++....|||.+|...|..+++..|+..+.++..... +.|-+||.+|...+
T Consensus 825 dt~lSlacsggr~~vvelLl~~gankeh-rnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmng 903 (2131)
T KOG4369|consen 825 DTMLSLACSGGRTRVVELLLNAGANKEH-RNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNG 903 (2131)
T ss_pred CceEEEecCCCcchHHHHHHHhhccccc-cchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhcc
Confidence 9999999999999999999999998888 888889999999999999999999999887755443 55999999999886
Q ss_pred C
Q 006942 186 Y 186 (624)
Q Consensus 186 ~ 186 (624)
.
T Consensus 904 h 904 (2131)
T KOG4369|consen 904 H 904 (2131)
T ss_pred c
Confidence 3
|
|
| >KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-21 Score=205.84 Aligned_cols=116 Identities=22% Similarity=0.205 Sum_probs=102.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHH
Q 006942 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFL 147 (624)
Q Consensus 68 ~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A 147 (624)
...+-.|+|..||+.||.|+|++|+.++++ +..+|+.|.+||.+|+..||..+|+.|+.+.+++....|+.+.|+|.+|
T Consensus 753 Te~n~~t~LT~acaggh~e~vellv~rgan-iehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSla 831 (2131)
T KOG4369|consen 753 TEPNIKTNLTSACAGGHREEVELLVVRGAN-IEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLA 831 (2131)
T ss_pred cCccccccccccccCccHHHHHHHHHhccc-ccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEe
Confidence 344567999999999999999999999998 8889999999999999999999999999998887766899999999999
Q ss_pred HHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCC
Q 006942 148 IAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185 (624)
Q Consensus 148 ~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~ 185 (624)
|..|+.++|+.||..+..- ..++-...|||-+|..-+
T Consensus 832 csggr~~vvelLl~~gank-ehrnvsDytPlsla~Sgg 868 (2131)
T KOG4369|consen 832 CSGGRTRVVELLLNAGANK-EHRNVSDYTPLSLARSGG 868 (2131)
T ss_pred cCCCcchHHHHHHHhhccc-cccchhhcCchhhhcCcc
Confidence 9999999999999887653 456777889999988654
|
|
| >PHA02741 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.5e-20 Score=169.02 Aligned_cols=129 Identities=16% Similarity=0.200 Sum_probs=115.8
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHcc----CchhhccCCCCCChHHHHHHHcCC----HHHHHHHHhcCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKV----DPETLARQDNHGHTAATLSAAKGN----LRALKLLVKYNPD 97 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~----~~~~~~~~d~~G~TpLh~Aa~~g~----~~iv~~Ll~~~~~ 97 (624)
+..| +||||+||+ .| +.++|+.|+... ...+++.+|..|.||||+|+..|+ .+++++|++.+++
T Consensus 18 ~~~g-~t~Lh~Aa~----~g---~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad 89 (169)
T PHA02741 18 NSEG-ENFFHEAAR----CG---CFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD 89 (169)
T ss_pred ccCC-CCHHHHHHH----cC---CHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC
Confidence 7789 999999999 99 999999987542 136789999999999999999999 5899999999988
Q ss_pred CcccCCC-CCChHHHHHHHcCCHHHHHHHHH-hcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCC
Q 006942 98 LTNIRHG-EGFLPVHDAALYGHKDTFHYLLE-VTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHP 164 (624)
Q Consensus 98 l~~~~n~-~G~TPLh~Aa~~g~~~iv~~Ll~-~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~ 164 (624)
++.+|. .|.||||+|+..++.+++++|++ .+.+.+. +|.+|.||||+|+..++.++++.|++...
T Consensus 90 -in~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~-~n~~g~tpL~~A~~~~~~~iv~~L~~~~~ 156 (169)
T PHA02741 90 -INAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHF-CNADNKSPFELAIDNEDVAMMQILREIVA 156 (169)
T ss_pred -CCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc-CCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence 777775 89999999999999999999998 4777777 89999999999999999999999998754
|
|
| >KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.8e-20 Score=184.63 Aligned_cols=233 Identities=21% Similarity=0.221 Sum_probs=175.7
Q ss_pred hHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHH
Q 006942 32 TIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVH 111 (624)
Q Consensus 32 T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh 111 (624)
-.+.-||. .| ..+=|+.|+..+ ...+..|.+|.|+||-+|.-.+.+||++|++++++ ++..|..|+||||
T Consensus 42 a~~l~A~~----~~---d~~ev~~ll~~g--a~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~-Vn~~d~e~wtPlh 111 (527)
T KOG0505|consen 42 AVFLEACS----RG---DLEEVRKLLNRG--ASPNLCNVDGLTALHQACIDDNLEMVKFLVENGAN-VNAQDNEGWTPLH 111 (527)
T ss_pred HHHHhccc----cc---cHHHHHHHhccC--CCccccCCccchhHHHHHhcccHHHHHHHHHhcCC-ccccccccCCcch
Confidence 44666777 88 999999999887 56688999999999999999999999999999998 8889999999999
Q ss_pred HHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCC
Q 006942 112 DAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASG 191 (624)
Q Consensus 112 ~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~ 191 (624)
.|+..||..++++|+..+++... .|.+|..|+-.|...-..++...-..... .+ +- +++.-
T Consensus 112 aaascg~~~i~~~li~~gA~~~a-vNsdg~~P~dl~e~ea~~~~l~~~~~r~g----------i~-ie-a~R~~------ 172 (527)
T KOG0505|consen 112 AAASCGYLNIVEYLIQHGANLLA-VNSDGNMPYDLAEDEATLDVLETEMARQG----------ID-IE-AARKA------ 172 (527)
T ss_pred hhcccccHHHHHHHHHhhhhhhh-ccCCCCCccccccCcchhHHHHHHHHHhc----------cc-HH-HHhhh------
Confidence 99999999999999999988877 78888888877766555554443333211 11 11 11100
Q ss_pred CcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCC
Q 006942 192 SRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMH 271 (624)
Q Consensus 192 ~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (624)
T Consensus 173 -------------------------------------------------------------------------------- 172 (527)
T KOG0505|consen 173 -------------------------------------------------------------------------------- 172 (527)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHH
Q 006942 272 LSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDH 351 (624)
Q Consensus 272 ~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~ 351 (624)
.....++-..+.......... ....|.|+||.|+.+|..++.+.|++. +.++...|.+|+||||.
T Consensus 173 -------------~e~~ml~D~~q~l~~G~~~d~-~~~rG~T~lHvAaa~Gy~e~~~lLl~a-g~~~~~~D~dgWtPlHA 237 (527)
T KOG0505|consen 173 -------------EEQTMLDDARQWLNAGAELDA-RHARGATALHVAAANGYTEVAALLLQA-GYSVNIKDYDGWTPLHA 237 (527)
T ss_pred -------------hHHHHHHHHHHHHhccccccc-cccccchHHHHHHhhhHHHHHHHHHHh-ccCcccccccCCCcccH
Confidence 000000001111111111112 233389999999999999999999999 88888889999999999
Q ss_pred HHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhc
Q 006942 352 AVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRL 391 (624)
Q Consensus 352 A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~ 391 (624)
|+..++.++.++|+.++ ..++.....|.||+.+|...
T Consensus 238 AA~Wg~~~~~elL~~~g---a~~d~~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 238 AAHWGQEDACELLVEHG---ADMDAKTKMGETPLDVADEE 274 (527)
T ss_pred HHHhhhHhHHHHHHHhh---cccchhhhcCCCCccchhhh
Confidence 99999999999999999 44559999999999999864
|
|
| >PHA02743 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-19 Score=163.48 Aligned_cols=137 Identities=18% Similarity=0.149 Sum_probs=117.7
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchH----HHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHH---HHHHHhcCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAI----CLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRA---LKLLVKYNPDL 98 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~----~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~i---v~~Ll~~~~~l 98 (624)
+.++ .++||.||+ .| +. ++++.|++.+ ..++.+|..|.||||+||..|+.+. +++|++.+++
T Consensus 17 ~~~~-~~~l~~a~~----~g---~~~~l~~~~~~l~~~g--~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad- 85 (166)
T PHA02743 17 DEDE-QNTFLRICR----TG---NIYELMEVAPFISGDG--HLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD- 85 (166)
T ss_pred ccCC-CcHHHHHHH----cC---CHHHHHHHHHHHhhcc--hhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC-
Confidence 5677 899999999 99 87 5666677765 6788899999999999999998664 8999999988
Q ss_pred cccCC-CCCChHHHHHHHcCCHHHHHHHHH-hcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCC
Q 006942 99 TNIRH-GEGFLPVHDAALYGHKDTFHYLLE-VTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRR 175 (624)
Q Consensus 99 ~~~~n-~~G~TPLh~Aa~~g~~~iv~~Ll~-~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~ 175 (624)
++.++ ..|.||||+|+..|+.+++++|++ .+.+.+. ++..|.||||+|+..++.++++.|++.+.+. +.++..|.
T Consensus 86 in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~-~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~-~~~~~~~~ 162 (166)
T PHA02743 86 INARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGA-INYQHETAYHIAYKMRDRRMMEILRANGAVC-DDPLSIGL 162 (166)
T ss_pred CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcccCCc
Confidence 77887 589999999999999999999995 7888887 8999999999999999999999999987765 44444443
|
|
| >KOG0514 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-19 Score=173.67 Aligned_cols=169 Identities=18% Similarity=0.138 Sum_probs=143.5
Q ss_pred CHHHHHHHHHcC----cc----ccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHH
Q 006942 6 DWQGVEDFVTNH----PD----ALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAAT 77 (624)
Q Consensus 6 ~~~~v~~ll~~~----~~----~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh 77 (624)
+.+.|...|... +. .+|-. |.+| +|+||+|+. .+ +.++|+.||+.+ ..+++.+|+-|+||++
T Consensus 238 ~pe~V~~~l~~f~als~~lL~yvVNla-DsNG-NTALHYsVS----Ha---NF~VV~~LLDSg-vC~VD~qNrAGYtpiM 307 (452)
T KOG0514|consen 238 DPEQVEDYLAYFEALSPPLLEYVVNLA-DSNG-NTALHYAVS----HA---NFDVVSILLDSG-VCDVDQQNRAGYTPVM 307 (452)
T ss_pred CHHHHHHHHHHHHhcChHHHHHHhhhh-cCCC-Ceeeeeeec----cc---chHHHHHHhccC-cccccccccccccHHH
Confidence 456666665542 21 23344 8899 999999999 99 999999999997 6889999999999999
Q ss_pred HHHH-----cCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCc
Q 006942 78 LSAA-----KGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANL 152 (624)
Q Consensus 78 ~Aa~-----~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~ 152 (624)
+|+. ..+.++|+.|-..+.- .-.....|+|+|++|+.+|+.++|+.||..+++++. +|.+|.|+|++|+.+||
T Consensus 308 LaALA~lk~~~d~~vV~~LF~mgnV-NaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNi-QDdDGSTALMCA~EHGh 385 (452)
T KOG0514|consen 308 LAALAKLKQPADRTVVERLFKMGDV-NAKASQHGQTALMLAVSHGRVDMVKALLACGADVNI-QDDDGSTALMCAAEHGH 385 (452)
T ss_pred HHHHHhhcchhhHHHHHHHHhccCc-chhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCcc-ccCCccHHHhhhhhhCh
Confidence 9993 4677889988876432 112346799999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCC
Q 006942 153 YDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPY 186 (624)
Q Consensus 153 ~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~ 186 (624)
.|+++.||..........|.+|.|+|.+|...|.
T Consensus 386 kEivklLLA~p~cd~sLtD~DgSTAl~IAleagh 419 (452)
T KOG0514|consen 386 KEIVKLLLAVPSCDISLTDVDGSTALSIALEAGH 419 (452)
T ss_pred HHHHHHHhccCcccceeecCCCchhhhhHHhcCc
Confidence 9999999998877778889999999999998763
|
|
| >PHA02884 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-18 Score=171.15 Aligned_cols=143 Identities=15% Similarity=0.119 Sum_probs=122.5
Q ss_pred cccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccC----CCCCChHHHHHHHcCCHHHHHHHHhcCC
Q 006942 21 LTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQ----DNHGHTAATLSAAKGNLRALKLLVKYNP 96 (624)
Q Consensus 21 ~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~----d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~ 96 (624)
+..+ |..|..++||.|+. .| +.++++.|+++| ++++.+ +..|.||||+|+..|+.+++++|+++++
T Consensus 25 ~~~~-d~~~~~~lL~~A~~----~~---~~eivk~LL~~G--AdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GA 94 (300)
T PHA02884 25 IKKK-NKICIANILYSSIK----FH---YTDIIDAILKLG--ADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGA 94 (300)
T ss_pred hhcc-CcCCCCHHHHHHHH----cC---CHHHHHHHHHCC--CCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4455 77774567888888 89 999999999998 567776 4689999999999999999999999999
Q ss_pred CCcccC-CCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCC
Q 006942 97 DLTNIR-HGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRR 175 (624)
Q Consensus 97 ~l~~~~-n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~ 175 (624)
+ ++.+ +..|.||||+|+..|+.+++++|++.+++.+. ++.+|.||||+|+..++.+++..+.. ...+..+.
T Consensus 95 D-VN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~-kd~~G~TpL~~A~~~~~~~~~~~~~~------~~~~~~~~ 166 (300)
T PHA02884 95 D-VNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINI-QTNDMVTPIELALMICNNFLAFMICD------NEISNFYK 166 (300)
T ss_pred C-cCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHhCChhHHHHhcC------Cccccccc
Confidence 8 6665 56899999999999999999999999999998 89999999999999998888765542 23567788
Q ss_pred CHHHHH
Q 006942 176 IILNTL 181 (624)
Q Consensus 176 TpLh~A 181 (624)
+|++++
T Consensus 167 ~~~~~~ 172 (300)
T PHA02884 167 HPKKIL 172 (300)
T ss_pred Chhhhh
Confidence 898865
|
|
| >KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.9e-19 Score=177.75 Aligned_cols=224 Identities=16% Similarity=0.148 Sum_probs=160.8
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|+.+||.+.|..+|...... +.. |.+| .|+||-||. .. +.++|++|++++ +++|..|..|+||||.|+
T Consensus 47 A~~~~d~~ev~~ll~~ga~~-~~~-n~Dg-lTalhq~~i----d~---~~e~v~~l~e~g--a~Vn~~d~e~wtPlhaaa 114 (527)
T KOG0505|consen 47 ACSRGDLEEVRKLLNRGASP-NLC-NVDG-LTALHQACI----DD---NLEMVKFLVENG--ANVNAQDNEGWTPLHAAA 114 (527)
T ss_pred ccccccHHHHHHHhccCCCc-ccc-CCcc-chhHHHHHh----cc---cHHHHHHHHHhc--CCccccccccCCcchhhc
Confidence 67899999999999887544 344 9999 999999999 99 999999999997 899999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh-Cc---HHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAA-NL---YDVA 156 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~-~~---~~~v 156 (624)
..||..++++|+.++++ +...|.+|..|.-+|..--..++...-.... |.+ + -+++. .. .+=+
T Consensus 115 scg~~~i~~~li~~gA~-~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~----------gi~-i-ea~R~~~e~~ml~D~ 181 (527)
T KOG0505|consen 115 SCGYLNIVEYLIQHGAN-LLAVNSDGNMPYDLAEDEATLDVLETEMARQ----------GID-I-EAARKAEEQTMLDDA 181 (527)
T ss_pred ccccHHHHHHHHHhhhh-hhhccCCCCCccccccCcchhHHHHHHHHHh----------ccc-H-HHHhhhhHHHHHHHH
Confidence 99999999999999998 6678899999988775444443333322221 111 1 11111 11 1112
Q ss_pred HHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcc
Q 006942 157 LDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKI 236 (624)
Q Consensus 157 ~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (624)
...+..+... ...+..|-|.||.|+.+|+
T Consensus 182 ~q~l~~G~~~-d~~~~rG~T~lHvAaa~Gy-------------------------------------------------- 210 (527)
T KOG0505|consen 182 RQWLNAGAEL-DARHARGATALHVAAANGY-------------------------------------------------- 210 (527)
T ss_pred HHHHhccccc-cccccccchHHHHHHhhhH--------------------------------------------------
Confidence 2233333332 3344447777777776642
Q ss_pred cCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHH
Q 006942 237 HSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAML 316 (624)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh 316 (624)
..+.++|....... . ..|.+|+||||
T Consensus 211 --------------------------------------------------~e~~~lLl~ag~~~---~-~~D~dgWtPlH 236 (527)
T KOG0505|consen 211 --------------------------------------------------TEVAALLLQAGYSV---N-IKDYDGWTPLH 236 (527)
T ss_pred --------------------------------------------------HHHHHHHHHhccCc---c-cccccCCCccc
Confidence 01222222222221 1 27888999999
Q ss_pred HHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHc
Q 006942 317 AAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLY 355 (624)
Q Consensus 317 ~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~ 355 (624)
.|+..|..++++.|+++ +++....+..|+||+.+|..-
T Consensus 237 AAA~Wg~~~~~elL~~~-ga~~d~~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 237 AAAHWGQEDACELLVEH-GADMDAKTKMGETPLDVADEE 274 (527)
T ss_pred HHHHhhhHhHHHHHHHh-hcccchhhhcCCCCccchhhh
Confidence 99999999999999999 999887799999999998653
|
|
| >PHA02736 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=159.29 Aligned_cols=128 Identities=17% Similarity=0.153 Sum_probs=107.7
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHcc-----CchhhccCCCCCChHHHHHHHcCCHH---HHHHHHhcCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKV-----DPETLARQDNHGHTAATLSAAKGNLR---ALKLLVKYNPD 97 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~-----~~~~~~~~d~~G~TpLh~Aa~~g~~~---iv~~Ll~~~~~ 97 (624)
|.+| +||||+||+ .| +. ++.+.... .+..++.+|.+|.||||+|+..|+.+ ++++|++.+++
T Consensus 14 d~~g-~tpLh~A~~----~g---~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad 83 (154)
T PHA02736 14 DIEG-ENILHYLCR----NG---GV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGAD 83 (154)
T ss_pred CCCC-CCHHHHHHH----hC---CH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCC
Confidence 7789 999999999 99 73 33333221 11235668999999999999999874 68899999988
Q ss_pred CcccCC-CCCChHHHHHHHcCCHHHHHHHHHh-cCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCC
Q 006942 98 LTNIRH-GEGFLPVHDAALYGHKDTFHYLLEV-THGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPT 165 (624)
Q Consensus 98 l~~~~n-~~G~TPLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~ 165 (624)
++.+| ..|.||||+|+..|+.+++++|++. +.+.+. ++..|.||||+|+..|+.++++.|++.+.+
T Consensus 84 -in~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~-~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~ 151 (154)
T PHA02736 84 -INGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEI-LNYAFKTPYYVACERHDAKMMNILRAKGAQ 151 (154)
T ss_pred -ccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcc-ccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 77777 5899999999999999999999984 778777 899999999999999999999999987654
|
|
| >KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.6e-18 Score=147.68 Aligned_cols=144 Identities=15% Similarity=0.159 Sum_probs=116.6
Q ss_pred hHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHH
Q 006942 32 TIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVH 111 (624)
Q Consensus 32 T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh 111 (624)
-.+.+|+. .+ .+..|+.|++.- +..+|.+|.+|.||||-|+.+||.+||+.|+..+++ ...+...|.||||
T Consensus 65 rl~lwaae----~n---rl~eV~~lL~e~-an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn-~~a~T~~GWTPLh 135 (228)
T KOG0512|consen 65 RLLLWAAE----KN---RLTEVQRLLSEK-ANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN-KEAKTNEGWTPLH 135 (228)
T ss_pred HHHHHHHh----hc---cHHHHHHHHHhc-cccccccccccccHHHHHHhcCchHHHHHHHHccCC-cccccccCccchh
Confidence 45677888 88 888898888874 566888999999999999999999999999988887 7788888999999
Q ss_pred HHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcH-HHHHHHHHhCCCCCcccCCCCCCHHHHHHcCC
Q 006942 112 DAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLY-DVALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185 (624)
Q Consensus 112 ~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~-~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~ 185 (624)
-||.-.+.+++-.||+++++++. ..+...||||.|+...+. +.+.+|+.....-+..++..+.||+.+|-+.+
T Consensus 136 SAckWnN~~va~~LLqhgaDVnA-~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 136 SACKWNNFEVAGRLLQHGADVNA-QTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS 209 (228)
T ss_pred hhhcccchhHHHHHHhccCcccc-cccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence 99999999999999999998888 777778999998876654 45555655544445667778889998887764
|
|
| >PHA02741 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-17 Score=154.81 Aligned_cols=127 Identities=13% Similarity=0.111 Sum_probs=107.5
Q ss_pred hHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhc------CCCCcccCCCCCChHHHHHHHcCC----
Q 006942 49 AICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKY------NPDLTNIRHGEGFLPVHDAALYGH---- 118 (624)
Q Consensus 49 ~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~------~~~l~~~~n~~G~TPLh~Aa~~g~---- 118 (624)
+..+++.++ +.+|..|.||||+||+.|+.++++.|++. +.+ ++.+|..|.||||+|+..|+
T Consensus 6 ~~~~~~~~~--------~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~-in~~d~~g~T~Lh~A~~~g~~~~~ 76 (169)
T PHA02741 6 FMTCLEEMI--------AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAA-LNATDDAGQMCIHIAAEKHEAQLA 76 (169)
T ss_pred HHHHHHHHh--------hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhh-hhccCCCCCcHHHHHHHcCChHHH
Confidence 445555554 44688999999999999999999998653 244 77899999999999999999
Q ss_pred HHHHHHHHHhcCCCccccCC-CCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCC
Q 006942 119 KDTFHYLLEVTHGVDIYSGK-DGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185 (624)
Q Consensus 119 ~~iv~~Ll~~~~~~~~~~~~-~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~ 185 (624)
.+++++|++.+++.+. ++. +|+||||+|+..++.++++.|+...+.....+|.+|.||||+|+..+
T Consensus 77 ~~ii~~Ll~~gadin~-~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~ 143 (169)
T PHA02741 77 AEIIDHLIELGADINA-QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNE 143 (169)
T ss_pred HHHHHHHHHcCCCCCC-CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCC
Confidence 5899999999999887 674 99999999999999999999998533344678999999999999875
|
|
| >KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.5e-17 Score=170.87 Aligned_cols=205 Identities=21% Similarity=0.183 Sum_probs=153.9
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCC--------CCcccCCCCCChHHHHHHH---cCCHHHHHHHHHhcCCCccc----cC
Q 006942 73 HTAATLSAAKGNLRALKLLVKYNP--------DLTNIRHGEGFLPVHDAAL---YGHKDTFHYLLEVTHGVDIY----SG 137 (624)
Q Consensus 73 ~TpLh~Aa~~g~~~iv~~Ll~~~~--------~l~~~~n~~G~TPLh~Aa~---~g~~~iv~~Ll~~~~~~~~~----~~ 137 (624)
..++..|...|..+....|+.... .-++.+..-|+|.||.|.. .++.++++.|++..+..... ..
T Consensus 102 ~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~ee 181 (782)
T KOG3676|consen 102 RDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEE 181 (782)
T ss_pred hhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHh
Confidence 367778888888888777766542 2255566789999999987 45679999999987753322 56
Q ss_pred CCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCccc
Q 006942 138 KDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQT 217 (624)
Q Consensus 138 ~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~ 217 (624)
..|.||||.|+.+.+.++|..|++.+.|+.. ...|+.|.. ..+.
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~a-------------Ra~G~FF~~-----------------------~dqk 225 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLAAGADVHA-------------RACGAFFCP-----------------------DDQK 225 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHHcCCchhh-------------HhhccccCc-----------------------cccc
Confidence 7899999999999999999999999988622 112221110 0000
Q ss_pred CCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHH
Q 006942 218 NDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIIC 297 (624)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~ 297 (624)
..+
T Consensus 226 ~~r----------------------------------------------------------------------------- 228 (782)
T KOG3676|consen 226 ASR----------------------------------------------------------------------------- 228 (782)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred hhccccccc-CCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCcccccccc
Q 006942 298 EGVVWTNFQ-NSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSS 376 (624)
Q Consensus 298 ~~~~~~~~~-~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~ 376 (624)
..++++ .-.-|..||-.||..++.|++++|+++ ++|+..+|..|+|.||..+.+-..+.++++++++.. .+...
T Consensus 229 ---k~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~-gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~-~l~~v 303 (782)
T KOG3676|consen 229 ---KSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH-GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN-ALEHV 303 (782)
T ss_pred ---cccCCcceeeeccCchHHHHHcCCHHHHHHHHhc-CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC-ccccc
Confidence 000110 112468999999999999999999999 999998899999999999999999999999999922 44668
Q ss_pred ccCCCCchhhhhhhcCCCC
Q 006942 377 RDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 377 ~D~~GnTpLHlAa~~~~~~ 395 (624)
+|+.|-|||-+||+.|..+
T Consensus 304 ~N~qgLTPLtLAaklGk~e 322 (782)
T KOG3676|consen 304 RNNQGLTPLTLAAKLGKKE 322 (782)
T ss_pred cccCCCChHHHHHHhhhHH
Confidence 9999999999999999854
|
|
| >PHA02743 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.6e-18 Score=154.83 Aligned_cols=128 Identities=12% Similarity=0.070 Sum_probs=107.8
Q ss_pred CccCCCHHHHHHH---HHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHH---HHHHHHHccCchhhccCC-CCCC
Q 006942 1 MIEKNDWQGVEDF---VTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAIC---LLDKLASKVDPETLARQD-NHGH 73 (624)
Q Consensus 1 Aa~~G~~~~v~~l---l~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~---iv~~Ll~~~~~~~~~~~d-~~G~ 73 (624)
|++.|+.+.++++ +.+++..++.+ +.+| +||||+||. .| +.+ ++++|++.+ .+++.+| ..|.
T Consensus 27 a~~~g~~~~l~~~~~~l~~~g~~~~~~-d~~g-~t~Lh~Aa~----~g---~~~~~~~i~~Ll~~G--adin~~d~~~g~ 95 (166)
T PHA02743 27 ICRTGNIYELMEVAPFISGDGHLLHRY-DHHG-RQCTHMVAW----YD---RANAVMKIELLVNMG--ADINARELGTGN 95 (166)
T ss_pred HHHcCCHHHHHHHHHHHhhcchhhhcc-CCCC-CcHHHHHHH----hC---ccCHHHHHHHHHHcC--CCCCCCCCCCCC
Confidence 5778998766653 33455566666 8899 999999999 98 654 589999997 7788888 5899
Q ss_pred hHHHHHHHcCCHHHHHHHHh-cCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCC
Q 006942 74 TAATLSAAKGNLRALKLLVK-YNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGA 141 (624)
Q Consensus 74 TpLh~Aa~~g~~~iv~~Ll~-~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~ 141 (624)
||||+|+..|+.+++++|++ .+.+ ++.+|..|.||||+|+..|+.+++++|++++++.+. ++..|.
T Consensus 96 TpLh~A~~~g~~~iv~~Ll~~~gad-~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~-~~~~~~ 162 (166)
T PHA02743 96 TLLHIAASTKNYELAEWLCRQLGVN-LGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDD-PLSIGL 162 (166)
T ss_pred cHHHHHHHhCCHHHHHHHHhccCCC-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cccCCc
Confidence 99999999999999999996 5766 778999999999999999999999999999988877 565553
|
|
| >KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-17 Score=144.86 Aligned_cols=109 Identities=23% Similarity=0.255 Sum_probs=101.4
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHH
Q 006942 75 AATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYD 154 (624)
Q Consensus 75 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~ 154 (624)
-+-.|+..+...-|+.||+..++.++.+|.+|.||||.|+.+||.+||+.|+..+++... +...|+||||.||.-++++
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a-~T~~GWTPLhSAckWnN~~ 144 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEA-KTNEGWTPLHSACKWNNFE 144 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccc-ccccCccchhhhhcccchh
Confidence 467899999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred HHHHHHHhCCCCCcccCCCCCCHHHHHHcCC
Q 006942 155 VALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185 (624)
Q Consensus 155 ~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~ 185 (624)
++-.|++.+.++ +.......||||+|+...
T Consensus 145 va~~LLqhgaDV-nA~t~g~ltpLhlaa~~r 174 (228)
T KOG0512|consen 145 VAGRLLQHGADV-NAQTKGLLTPLHLAAGNR 174 (228)
T ss_pred HHHHHHhccCcc-cccccccchhhHHhhccc
Confidence 999999999987 445556689999999775
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.4e-19 Score=162.97 Aligned_cols=133 Identities=19% Similarity=0.273 Sum_probs=118.5
Q ss_pred cCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHc
Q 006942 3 EKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAK 82 (624)
Q Consensus 3 ~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~ 82 (624)
+.|+--.|+-.|++...+++.- |..| .+|||+||+ .| |..+|+.|+..| +-+|..|...+||||+||..
T Consensus 9 regna~qvrlwld~tehdln~g-ddhg-fsplhwaak----eg---h~aivemll~rg--arvn~tnmgddtplhlaaah 77 (448)
T KOG0195|consen 9 REGNAFQVRLWLDDTEHDLNVG-DDHG-FSPLHWAAK----EG---HVAIVEMLLSRG--ARVNSTNMGDDTPLHLAAAH 77 (448)
T ss_pred hcCCeEEEEEEecCcccccccc-cccC-cchhhhhhh----cc---cHHHHHHHHhcc--cccccccCCCCcchhhhhhc
Confidence 4555556666677766777776 8889 999999999 99 999999999998 67788888889999999999
Q ss_pred CCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q 006942 83 GNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLI 148 (624)
Q Consensus 83 g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~ 148 (624)
||-++|+.|+.+.++ ++..|..|+|||||||.-|...+.+-|+..|+.++. .+++|.|||.-|-
T Consensus 78 ghrdivqkll~~kad-vnavnehgntplhyacfwgydqiaedli~~ga~v~i-cnk~g~tpldkak 141 (448)
T KOG0195|consen 78 GHRDIVQKLLSRKAD-VNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNI-CNKKGMTPLDKAK 141 (448)
T ss_pred ccHHHHHHHHHHhcc-cchhhccCCCchhhhhhhcHHHHHHHHHhccceeee-cccCCCCchhhhc
Confidence 999999999999998 889999999999999999999999999999999998 8999999998763
|
|
| >PHA02884 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.7e-17 Score=161.00 Aligned_cols=118 Identities=11% Similarity=0.036 Sum_probs=100.2
Q ss_pred hccCCCCCChH-HHHHHHcCCHHHHHHHHhcCCCCcccC----CCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCC
Q 006942 65 LARQDNHGHTA-ATLSAAKGNLRALKLLVKYNPDLTNIR----HGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKD 139 (624)
Q Consensus 65 ~~~~d~~G~Tp-Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~----n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~ 139 (624)
+..+|..|.|+ ||.|+..|+.+++++|+++|++ ++.+ +..|.||||+|+..|+.+++++|+++|++++...+..
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAd-iN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~ 103 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGAD-PEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEA 103 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCC-ccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCC
Confidence 56678888865 5666677999999999999998 6665 4689999999999999999999999999998722568
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 140 GANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 140 G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
|.||||.|+..++.++++.|++.+.++ +.+|..|.||||+|++.
T Consensus 104 g~TpLh~Aa~~~~~eivklLL~~GAdi-n~kd~~G~TpL~~A~~~ 147 (300)
T PHA02884 104 KITPLYISVLHGCLKCLEILLSYGADI-NIQTNDMVTPIELALMI 147 (300)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHh
Confidence 999999999999999999999998765 45677788888877754
|
|
| >PHA02736 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.4e-17 Score=150.38 Aligned_cols=96 Identities=18% Similarity=0.133 Sum_probs=79.0
Q ss_pred hhccCCCCCChHHHHHHHcCCHHHHHHHHhc------CCCCcccCCCCCChHHHHHHHcCCH---HHHHHHHHhcCCCcc
Q 006942 64 TLARQDNHGHTAATLSAAKGNLRALKLLVKY------NPDLTNIRHGEGFLPVHDAALYGHK---DTFHYLLEVTHGVDI 134 (624)
Q Consensus 64 ~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~------~~~l~~~~n~~G~TPLh~Aa~~g~~---~iv~~Ll~~~~~~~~ 134 (624)
..+.+|.+|.||||+||+.|+. ++++... ++.++..+|.+|.||||+|+..|+. +++++|++.+++.+.
T Consensus 9 ~~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~ 86 (154)
T PHA02736 9 FASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADING 86 (154)
T ss_pred HHHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccc
Confidence 3567889999999999999984 3333322 2334556789999999999999987 468999999999887
Q ss_pred ccC-CCCCcHHHHHHHhCcHHHHHHHHHh
Q 006942 135 YSG-KDGANVLSFLIAANLYDVALDLLKR 162 (624)
Q Consensus 135 ~~~-~~G~t~Lh~A~~~~~~~~v~~Ll~~ 162 (624)
++ .+|.||||+|+..++.++++.|+..
T Consensus 87 -~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~ 114 (154)
T PHA02736 87 -KERVFGNTPLHIAVYTQNYELATWLCNQ 114 (154)
T ss_pred -cCCCCCCcHHHHHHHhCCHHHHHHHHhC
Confidence 76 5999999999999999999999974
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.8e-17 Score=152.32 Aligned_cols=118 Identities=20% Similarity=0.257 Sum_probs=110.3
Q ss_pred chhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCC
Q 006942 62 PETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGA 141 (624)
Q Consensus 62 ~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~ 141 (624)
..++|.-|..|.+|||.||+.||..+|+.|+.+++. ++..|....||||+|+..||.++|+.|++..++++. .+..|.
T Consensus 24 ehdln~gddhgfsplhwaakegh~aivemll~rgar-vn~tnmgddtplhlaaahghrdivqkll~~kadvna-vnehgn 101 (448)
T KOG0195|consen 24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGAR-VNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA-VNEHGN 101 (448)
T ss_pred ccccccccccCcchhhhhhhcccHHHHHHHHhcccc-cccccCCCCcchhhhhhcccHHHHHHHHHHhcccch-hhccCC
Confidence 467899999999999999999999999999999998 888999999999999999999999999999999999 999999
Q ss_pred cHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 006942 142 NVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLA 182 (624)
Q Consensus 142 t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa 182 (624)
||||+||.-|.-.+++.|+..+..+ ...|++|.|||.-|-
T Consensus 102 tplhyacfwgydqiaedli~~ga~v-~icnk~g~tpldkak 141 (448)
T KOG0195|consen 102 TPLHYACFWGYDQIAEDLISCGAAV-NICNKKGMTPLDKAK 141 (448)
T ss_pred CchhhhhhhcHHHHHHHHHhcccee-eecccCCCCchhhhc
Confidence 9999999999999999999987754 678999999998763
|
|
| >cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.7e-15 Score=132.36 Aligned_cols=123 Identities=29% Similarity=0.386 Sum_probs=112.7
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
+.+| .||||.|+. .| +.++++.|++.+ .+.+..+..|.||||+|+..++.++++.|++.++. ++..|..
T Consensus 4 ~~~g-~t~l~~a~~----~~---~~~~i~~li~~~--~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~ 72 (126)
T cd00204 4 DEDG-RTPLHLAAS----NG---HLEVVKLLLENG--ADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD-VNARDKD 72 (126)
T ss_pred CcCC-CCHHHHHHH----cC---cHHHHHHHHHcC--CCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-ccccCCC
Confidence 6789 999999999 99 999999999997 44478899999999999999999999999999876 6678899
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHH
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLL 160 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll 160 (624)
|.||+|+|+..++.+++++|++++..... .+..|.||++.|+..++.+++++|+
T Consensus 73 ~~~~l~~a~~~~~~~~~~~L~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 73 GNTPLHLAARNGNLDVVKLLLKHGADVNA-RDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 99999999999999999999999877777 7899999999999999999998874
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. |
| >PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-15 Score=124.79 Aligned_cols=87 Identities=30% Similarity=0.399 Sum_probs=66.2
Q ss_pred HHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHH
Q 006942 34 FHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDA 113 (624)
Q Consensus 34 Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~A 113 (624)
||+||+ .| +.++++.|++.+ .+++. |+||||+||..|+.+++++|++++++ ++.+|..|.||||+|
T Consensus 1 L~~A~~----~~---~~~~~~~ll~~~--~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A 66 (89)
T PF12796_consen 1 LHIAAQ----NG---NLEILKFLLEKG--ADINL----GNTALHYAAENGNLEIVKLLLENGAD-INSQDKNGNTALHYA 66 (89)
T ss_dssp HHHHHH----TT---THHHHHHHHHTT--STTTS----SSBHHHHHHHTTTHHHHHHHHHTTTC-TT-BSTTSSBHHHHH
T ss_pred CHHHHH----cC---CHHHHHHHHHCc--CCCCC----CCCHHHHHHHcCCHHHHHHHHHhccc-ccccCCCCCCHHHHH
Confidence 678888 88 888888888865 33333 77888888888888888888888777 677778888888888
Q ss_pred HHcCCHHHHHHHHHhcCCCcc
Q 006942 114 ALYGHKDTFHYLLEVTHGVDI 134 (624)
Q Consensus 114 a~~g~~~iv~~Ll~~~~~~~~ 134 (624)
+.+|+.+++++|++++++.+.
T Consensus 67 ~~~~~~~~~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 67 AENGNLEIVKLLLEHGADVNI 87 (89)
T ss_dssp HHTTHHHHHHHHHHTTT-TTS
T ss_pred HHcCCHHHHHHHHHcCCCCCC
Confidence 888888888888888776654
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B .... |
| >PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-14 Score=119.36 Aligned_cols=85 Identities=26% Similarity=0.397 Sum_probs=77.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHH
Q 006942 76 ATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDV 155 (624)
Q Consensus 76 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~ 155 (624)
||+||+.|+.++++.|++.+++ ++. |.||||+||.+|+.+++++|++.+++.+. ++.+|+||||+|+.+|+.++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~-~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGAD-INL----GNTALHYAAENGNLEIVKLLLENGADINS-QDKNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTST-TTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT--BSTTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCC-CCC----CCCHHHHHHHcCCHHHHHHHHHhcccccc-cCCCCCCHHHHHHHcCCHHH
Confidence 7999999999999999998877 332 89999999999999999999999999988 89999999999999999999
Q ss_pred HHHHHHhCCCC
Q 006942 156 ALDLLKRHPTI 166 (624)
Q Consensus 156 v~~Ll~~~~~l 166 (624)
+++|++.+.++
T Consensus 75 ~~~Ll~~g~~~ 85 (89)
T PF12796_consen 75 VKLLLEHGADV 85 (89)
T ss_dssp HHHHHHTTT-T
T ss_pred HHHHHHcCCCC
Confidence 99999997765
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B .... |
| >KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.2e-15 Score=155.57 Aligned_cols=159 Identities=18% Similarity=0.166 Sum_probs=134.2
Q ss_pred cccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhcc----CCCCCChHHHHHHHcCCHHHHHHHHhc
Q 006942 19 DALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLAR----QDNHGHTAATLSAAKGNLRALKLLVKY 94 (624)
Q Consensus 19 ~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~----~d~~G~TpLh~Aa~~g~~~iv~~Ll~~ 94 (624)
..++.+ ...| +|.||.|.. +.++.+.++++.|++.. |..+|. ....|.||||+|+.+.+.++|++|++.
T Consensus 134 w~~~~R-Ga~G-ET~Lh~~lL----~~~~~~n~la~~LL~~~-p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~ 206 (782)
T KOG3676|consen 134 WKLNER-GATG-ETLLHKALL----NLSDGHNELARVLLEIF-PKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAA 206 (782)
T ss_pred hccccc-cchh-hhHHHHHHh----cCchhHHHHHHHHHHHh-HHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHc
Confidence 345555 6678 999999998 77666999999999986 443332 235699999999999999999999999
Q ss_pred CCCCcccC------------CC-----------CCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Q 006942 95 NPDLTNIR------------HG-----------EGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAAN 151 (624)
Q Consensus 95 ~~~l~~~~------------n~-----------~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~ 151 (624)
+++ ++.+ .. .|+.||-+||-.++.|++++|++++++++. +|..|+|.||..+...
T Consensus 207 gAD-V~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~a-qDS~GNTVLH~lVi~~ 284 (782)
T KOG3676|consen 207 GAD-VHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNA-QDSNGNTVLHMLVIHF 284 (782)
T ss_pred CCc-hhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCc-cccCCChHHHHHHHHH
Confidence 887 3321 11 389999999999999999999999999999 9999999999999998
Q ss_pred cHHHHHHHHHhCCC-CCcccCCCCCCHHHHHHcCCC
Q 006942 152 LYDVALDLLKRHPT-IGRDSIDSRRIILNTLAQKPY 186 (624)
Q Consensus 152 ~~~~v~~Ll~~~~~-l~~~~d~~G~TpLh~Aa~~~~ 186 (624)
..++-..+++.+.. +...+|+.|.|||.+||+.|.
T Consensus 285 ~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk 320 (782)
T KOG3676|consen 285 VTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGK 320 (782)
T ss_pred HHHHHHHHHhcCCCccccccccCCCChHHHHHHhhh
Confidence 88999999998876 346789999999999998863
|
|
| >cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-13 Score=120.37 Aligned_cols=116 Identities=30% Similarity=0.402 Sum_probs=104.6
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHH
Q 006942 67 RQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSF 146 (624)
Q Consensus 67 ~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~ 146 (624)
.+|.+|.||||.|+..|+.++++.|++.++. ...++..|.||+|.|+..++.+++++|++.+...+. .+..|.||+|.
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~-~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~-~~~~~~~~l~~ 79 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA-RDKDGNTPLHL 79 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHH
Confidence 4578899999999999999999999999887 478889999999999999999999999999987776 78999999999
Q ss_pred HHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCC
Q 006942 147 LIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185 (624)
Q Consensus 147 A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~ 185 (624)
|+..++.+++++|++++.+. ...|..|.||++.|....
T Consensus 80 a~~~~~~~~~~~L~~~~~~~-~~~~~~~~~~l~~~~~~~ 117 (126)
T cd00204 80 AARNGNLDVVKLLLKHGADV-NARDKDGRTPLHLAAKNG 117 (126)
T ss_pred HHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHHhcC
Confidence 99999999999999987554 557788999999998763
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. |
| >COG0666 Arp FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.9e-13 Score=128.88 Aligned_cols=127 Identities=24% Similarity=0.298 Sum_probs=117.5
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCC-----HHHHHHHHhcCC--CC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGN-----LRALKLLVKYNP--DL 98 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~-----~~iv~~Ll~~~~--~l 98 (624)
+..+ .+++|.|+. .+ ..+++++++..+ .+++.+|.+|.||||+|+..|+ .++++.|++.++ ..
T Consensus 70 ~~~~-~~~~~~~~~----~~---~~~~~~~l~~~~--~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~ 139 (235)
T COG0666 70 DLDG-RLPLHSAAS----KG---DDKIVKLLLASG--ADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDV 139 (235)
T ss_pred Cccc-cCHHHHHHH----cC---cHHHHHHHHHcC--CCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCC
Confidence 4557 899999999 99 999999999987 6669999999999999999999 999999999999 66
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhC
Q 006942 99 TNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRH 163 (624)
Q Consensus 99 ~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~ 163 (624)
...+|..|.||||+|+..|+.++++.|++.+++... ++..|.|+++.|+..++.+++..+++..
T Consensus 140 ~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 140 NNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNS-RNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred ccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcc-cccCCCcchhhhcccchHHHHHHHHhcC
Confidence 888899999999999999999999999999999888 8999999999999999999999999875
|
|
| >KOG4214 consensus Myotrophin and similar proteins [Transcription] | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.8e-13 Score=105.01 Aligned_cols=91 Identities=21% Similarity=0.300 Sum_probs=46.9
Q ss_pred hHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHh
Q 006942 49 AICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128 (624)
Q Consensus 49 ~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~ 128 (624)
.++-|+..+..+ .++|..= .|+||||+||-.|.++++++|+..+++ ++.+|+.|.|||.-|+..||.++|++|+++
T Consensus 14 ~~DeVk~~v~~g--~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~-i~~kDKygITPLLsAvwEGH~~cVklLL~~ 89 (117)
T KOG4214|consen 14 EIDEVKQSVNEG--LNVNEIY-GGRTPLHYAADYGQLSILEFLISIGAN-IQDKDKYGITPLLSAVWEGHRDCVKLLLQN 89 (117)
T ss_pred cHHHHHHHHHcc--ccHHHHh-CCcccchHhhhcchHHHHHHHHHhccc-cCCccccCCcHHHHHHHHhhHHHHHHHHHc
Confidence 555555555443 2222221 455555555555555555555555555 455555555555555555555555555555
Q ss_pred cCCCccccCCCCCcHH
Q 006942 129 THGVDIYSGKDGANVL 144 (624)
Q Consensus 129 ~~~~~~~~~~~G~t~L 144 (624)
+++-.. +..+|.+.+
T Consensus 90 GAdrt~-~~PdG~~~~ 104 (117)
T KOG4214|consen 90 GADRTI-HAPDGTALI 104 (117)
T ss_pred Ccccce-eCCCchhHH
Confidence 555444 455554433
|
|
| >KOG4214 consensus Myotrophin and similar proteins [Transcription] | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.3e-13 Score=102.10 Aligned_cols=105 Identities=17% Similarity=0.211 Sum_probs=88.9
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCc
Q 006942 73 HTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANL 152 (624)
Q Consensus 73 ~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~ 152 (624)
+--+..+..+|..+-||..+..+-+.-.+ ..|.+|||+|+.+|+.+++++|+..+++.+. +|+.|.|||-.|+..||
T Consensus 3 d~~~~W~vkNG~~DeVk~~v~~g~nVn~~--~ggR~plhyAAD~GQl~ilefli~iGA~i~~-kDKygITPLLsAvwEGH 79 (117)
T KOG4214|consen 3 DMSVAWNVKNGEIDEVKQSVNEGLNVNEI--YGGRTPLHYAADYGQLSILEFLISIGANIQD-KDKYGITPLLSAVWEGH 79 (117)
T ss_pred chhHhhhhccCcHHHHHHHHHccccHHHH--hCCcccchHhhhcchHHHHHHHHHhccccCC-ccccCCcHHHHHHHHhh
Confidence 34567888999999999999888653222 3799999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHhCCCCCcccCCCCCCHHHHH
Q 006942 153 YDVALDLLKRHPTIGRDSIDSRRIILNTL 181 (624)
Q Consensus 153 ~~~v~~Ll~~~~~l~~~~d~~G~TpLh~A 181 (624)
.++|++|++++.+- ..+..+|.+.+..+
T Consensus 80 ~~cVklLL~~GAdr-t~~~PdG~~~~eat 107 (117)
T KOG4214|consen 80 RDCVKLLLQNGADR-TIHAPDGTALIEAT 107 (117)
T ss_pred HHHHHHHHHcCccc-ceeCCCchhHHhhc
Confidence 99999999998764 44566777766543
|
|
| >PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.6e-12 Score=95.22 Aligned_cols=54 Identities=37% Similarity=0.555 Sum_probs=42.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHH
Q 006942 72 GHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLL 126 (624)
Q Consensus 72 G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll 126 (624)
|.||||.||+.|+.++++.|++++.+ ++.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~d-in~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGAD-INAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSG-TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 67899999999999999999988877 7777889999999999999999999886
|
... |
| >PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.9e-13 Score=97.38 Aligned_cols=56 Identities=29% Similarity=0.450 Sum_probs=29.1
Q ss_pred HHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHH
Q 006942 56 LASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDA 113 (624)
Q Consensus 56 Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~A 113 (624)
||+.+ +.+++.+|..|+||||+||..|+.++|++|++.+.+ ++.+|.+|+||||+|
T Consensus 1 LL~~~-~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d-~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHG-PADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGAD-PNAKDKDGQTPLHYA 56 (56)
T ss_dssp ------T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT---TT---TTS--HHHH-
T ss_pred CCccC-cCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCC-CCCCcCCCCCHHHhC
Confidence 45665 677788888888888888888888888888877776 778888888888876
|
|
| >COG0666 Arp FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.7e-11 Score=115.90 Aligned_cols=130 Identities=24% Similarity=0.259 Sum_probs=108.4
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCc-----HHHHHHHHHhCCC--CCcccC
Q 006942 99 TNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANL-----YDVALDLLKRHPT--IGRDSI 171 (624)
Q Consensus 99 ~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~-----~~~v~~Ll~~~~~--l~~~~d 171 (624)
....+..+.+|+|.++..+..+++++|+..+.+.+. ++.+|.||||+|+..++ .++++.|++.+.. ....
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~-- 142 (235)
T COG0666 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNA-KDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNL-- 142 (235)
T ss_pred cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCccc-ccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccc--
Confidence 445667789999999999999999999999999877 89999999999999999 8999999988763 2222
Q ss_pred CCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchh
Q 006942 172 DSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQIT 251 (624)
Q Consensus 172 ~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (624)
T Consensus 143 -------------------------------------------------------------------------------- 142 (235)
T COG0666 143 -------------------------------------------------------------------------------- 142 (235)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHH
Q 006942 252 TTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFI 331 (624)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll 331 (624)
.+..|.||||+|+..|+.++++.|+
T Consensus 143 -------------------------------------------------------~~~~g~tpl~~A~~~~~~~~~~~ll 167 (235)
T COG0666 143 -------------------------------------------------------RDEDGNTPLHWAALNGDADIVELLL 167 (235)
T ss_pred -------------------------------------------------------cCCCCCchhHHHHHcCchHHHHHHH
Confidence 4556677777777777888899999
Q ss_pred HccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcC
Q 006942 332 MAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGV 367 (624)
Q Consensus 332 ~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 367 (624)
+. +++....|..|.|++|.|+..++.++++.+.+.
T Consensus 168 ~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~ 202 (235)
T COG0666 168 EA-GADPNSRNSYGVTALDPAAKNGRIELVKLLLDK 202 (235)
T ss_pred hc-CCCCcccccCCCcchhhhcccchHHHHHHHHhc
Confidence 98 887776688999999999999999999888875
|
|
| >PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.8e-12 Score=92.68 Aligned_cols=53 Identities=23% Similarity=0.353 Sum_probs=45.0
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLV 92 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll 92 (624)
+||||.||+ .| +.+++++|++.+ .+++.+|.+|.||||+|+..|+.+++++|+
T Consensus 2 ~t~lh~A~~----~g---~~~~~~~Ll~~~--~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 2 RTPLHWAAR----SG---NLEIVKLLLEHG--ADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SBHHHHHHH----TT----HHHHHHHHHTT--SGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred ChHHHHHHH----hC---CHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 899999999 99 999999999996 778999999999999999999999999986
|
... |
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=9.6e-12 Score=139.13 Aligned_cols=106 Identities=13% Similarity=0.156 Sum_probs=92.0
Q ss_pred hHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHH
Q 006942 32 TIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVH 111 (624)
Q Consensus 32 T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh 111 (624)
+.||.|+. .| +.+.|+.|++.+ .+++.+|.+|+||||+||..|+.+++++|++.+++ ++.+|..|.||||
T Consensus 84 ~~L~~aa~----~G---~~~~vk~LL~~G--adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-vn~~d~~G~TpLh 153 (664)
T PTZ00322 84 VELCQLAA----SG---DAVGARILLTGG--ADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGAD-PTLLDKDGKTPLE 153 (664)
T ss_pred HHHHHHHH----cC---CHHHHHHHHHCC--CCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHH
Confidence 35889999 99 999999999987 67889999999999999999999999999999988 7889999999999
Q ss_pred HHHHcCCHHHHHHHHHh-------cCCCccccCCCCCcHHHHHH
Q 006942 112 DAALYGHKDTFHYLLEV-------THGVDIYSGKDGANVLSFLI 148 (624)
Q Consensus 112 ~Aa~~g~~~iv~~Ll~~-------~~~~~~~~~~~G~t~Lh~A~ 148 (624)
+|+..|+.+++++|+++ +++... .+..|.+++..+.
T Consensus 154 ~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~-~~~~g~~~~~~~~ 196 (664)
T PTZ00322 154 LAEENGFREVVQLLSRHSQCHFELGANAKP-DSFTGKPPSLEDS 196 (664)
T ss_pred HHHHCCcHHHHHHHHhCCCcccccCCCCCc-cccCCCCccchhh
Confidence 99999999999999998 555555 6777777765443
|
|
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.3e-11 Score=115.68 Aligned_cols=121 Identities=20% Similarity=0.257 Sum_probs=100.9
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPV 110 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPL 110 (624)
..||.-++. .| +.+-...|++.. ..+|.+|..|.|||..|+..|+.++|++|++.+++.....+..+.|||
T Consensus 13 ~~~Lle~i~----Kn---dt~~a~~LLs~v--r~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpL 83 (396)
T KOG1710|consen 13 KSPLLEAID----KN---DTEAALALLSTV--RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPL 83 (396)
T ss_pred hhHHHHHHc----cC---cHHHHHHHHHHh--hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHH
Confidence 578888888 88 888888888774 567888888888988888888988888888888886666777788899
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHH
Q 006942 111 HDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLK 161 (624)
Q Consensus 111 h~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~ 161 (624)
|.||.+|+.++.+.|++.|+.... .|.-|+|+-..|+.-|+.++|..+=+
T Consensus 84 mFAALSGn~dvcrllldaGa~~~~-vNsvgrTAaqmAAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 84 MFAALSGNQDVCRLLLDAGARMYL-VNSVGRTAAQMAAFVGHHECVAIINN 133 (396)
T ss_pred HHHHHcCCchHHHHHHhccCcccc-ccchhhhHHHHHHHhcchHHHHHHhc
Confidence 999888888888888888888877 78888888888888888888866543
|
|
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-11 Score=136.47 Aligned_cols=106 Identities=21% Similarity=0.207 Sum_probs=93.1
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcH
Q 006942 74 TAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLY 153 (624)
Q Consensus 74 TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~ 153 (624)
+.||.||..|+.++++.|++.+++ ++.+|..|.||||+||..|+.+++++|++.+++.+. +|.+|.||||+|+..|+.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gad-in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~-~d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGAD-PNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL-LDKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHCCcH
Confidence 358899999999999999999988 788999999999999999999999999999999988 999999999999999999
Q ss_pred HHHHHHHHh-------CCCCCcccCCCCCCHHHHHH
Q 006942 154 DVALDLLKR-------HPTIGRDSIDSRRIILNTLA 182 (624)
Q Consensus 154 ~~v~~Ll~~-------~~~l~~~~d~~G~TpLh~Aa 182 (624)
++++.|+++ +.+ ....+..|.+|+..+.
T Consensus 162 ~iv~~Ll~~~~~~~~~ga~-~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 162 EVVQLLSRHSQCHFELGAN-AKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHHhCCCcccccCCC-CCccccCCCCccchhh
Confidence 999999987 222 2344566777766554
|
|
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.8e-11 Score=112.69 Aligned_cols=111 Identities=19% Similarity=0.071 Sum_probs=100.4
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCc
Q 006942 73 HTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANL 152 (624)
Q Consensus 73 ~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~ 152 (624)
..||..+...|..+-...|+..-.+ ++.+|..|+|||..|+..|+.++|+.|++.+++++..++..+.||||+|+.+|+
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~vr~-vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn 91 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTVRQ-VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN 91 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHhhh-hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence 4799999999999999999988555 778999999999999999999999999999999988788889999999999999
Q ss_pred HHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCC
Q 006942 153 YDVALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185 (624)
Q Consensus 153 ~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~ 185 (624)
.|+.+.|++.+... ...|.-|+|+-.+|+--|
T Consensus 92 ~dvcrllldaGa~~-~~vNsvgrTAaqmAAFVG 123 (396)
T KOG1710|consen 92 QDVCRLLLDAGARM-YLVNSVGRTAAQMAAFVG 123 (396)
T ss_pred chHHHHHHhccCcc-ccccchhhhHHHHHHHhc
Confidence 99999999988764 567888999999998766
|
|
| >PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.4e-12 Score=92.51 Aligned_cols=56 Identities=30% Similarity=0.446 Sum_probs=32.6
Q ss_pred HHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHH
Q 006942 91 LVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFL 147 (624)
Q Consensus 91 Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A 147 (624)
||++++..++.+|..|.||||+||.+|+.+++++|++.+.+.+. +|.+|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~-~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA-KDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT----TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC-CcCCCCCHHHhC
Confidence 56777555889999999999999999999999999988888888 899999999987
|
|
| >KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.9e-11 Score=121.98 Aligned_cols=121 Identities=16% Similarity=0.199 Sum_probs=104.8
Q ss_pred hHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHH
Q 006942 32 TIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVH 111 (624)
Q Consensus 32 T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh 111 (624)
-.|.-|+. .| ..|+|+..+... .|...-|.+|-|+||-|+..||.+||++|++.+.+ ++..|.+|+||||
T Consensus 552 aLLLDaaL----eG---EldlVq~~i~ev--~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~gan-VNa~DSdGWTPLH 621 (752)
T KOG0515|consen 552 ALLLDAAL----EG---ELDLVQRIIYEV--TDPSQPNDEGITALHNAICAGHYEIVKFLIEFGAN-VNAADSDGWTPLH 621 (752)
T ss_pred HHHHhhhh----cc---hHHHHHHHHHhh--cCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCc-ccCccCCCCchhh
Confidence 44566788 99 999999999886 67788899999999999999999999999999999 8999999999999
Q ss_pred HHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHH--HHhCcHHHHHHHHHh
Q 006942 112 DAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFL--IAANLYDVALDLLKR 162 (624)
Q Consensus 112 ~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A--~~~~~~~~v~~Ll~~ 162 (624)
+||..++..+++.|++.|+.+....-.++.|+..-| ...|..++..+|-.-
T Consensus 622 CAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~v 674 (752)
T KOG0515|consen 622 CAASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGV 674 (752)
T ss_pred hhhhcCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHHH
Confidence 999999999999999999887665667788887665 356778888888654
|
|
| >KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.9e-11 Score=119.36 Aligned_cols=102 Identities=18% Similarity=0.257 Sum_probs=89.9
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHH
Q 006942 76 ATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDV 155 (624)
Q Consensus 76 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~ 155 (624)
|.-|+..|.+++|+.++..-.+ ....|.+|.||||-|+-.||.+||++|++.+.+++. .|.+||||||+|+..++..+
T Consensus 554 LLDaaLeGEldlVq~~i~ev~D-pSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa-~DSdGWTPLHCAASCNnv~~ 631 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTD-PSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNA-ADSDGWTPLHCAASCNNVPM 631 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcC-CCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccC-ccCCCCchhhhhhhcCchHH
Confidence 4458899999999999988544 558999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHhCCCCCcccCCCCCCHHH
Q 006942 156 ALDLLKRHPTIGRDSIDSRRIILN 179 (624)
Q Consensus 156 v~~Ll~~~~~l~~~~d~~G~TpLh 179 (624)
++.|++.+..+....-.++.||..
T Consensus 632 ckqLVe~GaavfAsTlSDmeTa~e 655 (752)
T KOG0515|consen 632 CKQLVESGAAVFASTLSDMETAAE 655 (752)
T ss_pred HHHHHhccceEEeeecccccchhh
Confidence 999999998766555556666643
|
|
| >KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.3e-09 Score=109.09 Aligned_cols=116 Identities=19% Similarity=0.180 Sum_probs=79.7
Q ss_pred ccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHH
Q 006942 2 IEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAA 81 (624)
Q Consensus 2 a~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~ 81 (624)
+..+|+-.+++...+.++.+ .+ +++. .|.||+|+. .| +-|+|++++++++++.+++.|..|.|+||-||.
T Consensus 874 v~~~D~~klqE~h~~gg~ll-~~-~~~~-~sllh~a~~----tg---~~eivkyildh~p~elld~~de~get~lhkaa~ 943 (1004)
T KOG0782|consen 874 VLSSDLMKLQETHLNGGSLL-IQ-GPDH-CSLLHYAAK----TG---NGEIVKYILDHGPSELLDMADETGETALHKAAC 943 (1004)
T ss_pred HHhccHHHHHHHHhcCCceE-ee-Ccch-hhHHHHHHh----cC---ChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHH
Confidence 44555555555555555443 22 4555 677777777 77 777777777777666677777777777777777
Q ss_pred cCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHh
Q 006942 82 KGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128 (624)
Q Consensus 82 ~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~ 128 (624)
.++-.++++|++.++. +...|..|.||-..|-..|..+.+.||-+.
T Consensus 944 ~~~r~vc~~lvdagas-l~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 944 QRNRAVCQLLVDAGAS-LRKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred hcchHHHHHHHhcchh-heecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 7777777777777776 556677777777777777777777776544
|
|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.9e-08 Score=105.74 Aligned_cols=99 Identities=21% Similarity=0.218 Sum_probs=84.9
Q ss_pred CCHHHHHHHHHcCcc-ccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCC-CCChHHHHHHHc
Q 006942 5 NDWQGVEDFVTNHPD-ALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDN-HGHTAATLSAAK 82 (624)
Q Consensus 5 G~~~~v~~ll~~~~~-~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~-~G~TpLh~Aa~~ 82 (624)
|....++.+++++-. ..+.+ |..| +|+||+|+. .| ..++++.|+++| .++..+|. .|.||||-|...
T Consensus 28 s~~Nqlk~F~~k~c~n~anik-D~~G-R~alH~~~S----~~---k~~~l~wLlqhG--idv~vqD~ESG~taLHRaiyy 96 (1267)
T KOG0783|consen 28 SEPNQLKGFSEKSCQNLANIK-DRYG-RTALHIAVS----EN---KNSFLRWLLQHG--IDVFVQDEESGYTALHRAIYY 96 (1267)
T ss_pred CChhHHHHHHHHhhhhhhhHH-Hhhc-cceeeeeec----cc---hhHHHHHHHhcC--ceeeeccccccchHhhHhhhh
Confidence 444456777776443 34555 8899 999999999 99 999999999997 78888886 599999999999
Q ss_pred CCHHHHHHHHhcCCCCcccCCCCCChHHHHHHH
Q 006942 83 GNLRALKLLVKYNPDLTNIRHGEGFLPVHDAAL 115 (624)
Q Consensus 83 g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~ 115 (624)
|+.+++-.||.++.. +.++|++|.+||..-++
T Consensus 97 G~idca~lLL~~g~S-L~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 97 GNIDCASLLLSKGRS-LRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred chHHHHHHHHhcCCc-eEEecccCCCHHHHHhh
Confidence 999999999999988 88999999999998887
|
|
| >KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.4e-07 Score=96.45 Aligned_cols=99 Identities=19% Similarity=0.204 Sum_probs=91.4
Q ss_pred hhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCC-CCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCC
Q 006942 63 ETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP-DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGA 141 (624)
Q Consensus 63 ~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~-~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~ 141 (624)
.++-.++.+..|.||+|+..|+-++|++|++++| +++...|..|+|+||-|+-.++..+..+|++.++.... .|..|.
T Consensus 890 g~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~k-td~kg~ 968 (1004)
T KOG0782|consen 890 GSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRK-TDSKGK 968 (1004)
T ss_pred CceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhhee-cccCCC
Confidence 4677889999999999999999999999999977 57888999999999999999999999999999998877 899999
Q ss_pred cHHHHHHHhCcHHHHHHHHHh
Q 006942 142 NVLSFLIAANLYDVALDLLKR 162 (624)
Q Consensus 142 t~Lh~A~~~~~~~~v~~Ll~~ 162 (624)
||-..|-..|..|++.+|-.+
T Consensus 969 tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 969 TPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred ChHHHHHhcCCchHHHHHhhh
Confidence 999999999999999888654
|
|
| >KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1e-06 Score=95.65 Aligned_cols=121 Identities=17% Similarity=0.080 Sum_probs=61.3
Q ss_pred hHHHHHHhhhhhcCCcchHHHHHHHHHccCc--hhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChH
Q 006942 32 TIFHMIVELLIDAESDEAICLLDKLASKVDP--ETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLP 109 (624)
Q Consensus 32 T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~--~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TP 109 (624)
--...|++ .| +.-.|+..++.... -++|.+|.-|.++||+|..+.|.|++++|++++-.. .-+
T Consensus 27 ~~fL~a~E----~g---d~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdA 91 (822)
T KOG3609|consen 27 KGFLLAHE----NG---DVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDA 91 (822)
T ss_pred HHHHHHHH----cC---ChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chH
Confidence 33445555 55 55555555544322 234445555555555555555555555555554441 224
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCC---------ccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCC
Q 006942 110 VHDAALYGHKDTFHYLLEVTHGV---------DIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIG 167 (624)
Q Consensus 110 Lh~Aa~~g~~~iv~~Ll~~~~~~---------~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~ 167 (624)
|.+|+..|..++|+.++.+.... +...-..+.|||..|+..+++++++.|++++..+.
T Consensus 92 LL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 92 LLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 55555555555555555443221 00033444566666666666666666666555443
|
|
| >KOG0522 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.6e-07 Score=93.65 Aligned_cols=91 Identities=24% Similarity=0.395 Sum_probs=75.0
Q ss_pred hHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHH
Q 006942 32 TIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVH 111 (624)
Q Consensus 32 T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh 111 (624)
-|||.++. .. +...+.+.|... ....++.+|..|+||||+|+..||.+.++.|+..+++ +..+|++|.+|||
T Consensus 22 ~~lh~~~~----~~--~~~sl~~el~~~-~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad-v~~kN~~gWs~L~ 93 (560)
T KOG0522|consen 22 KPLHWAVV----TT--DSDSLEQELLAK-VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD-VSIKNNEGWSPLH 93 (560)
T ss_pred cccchhhh----cc--chhhHHHHHhhh-hhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC-ccccccccccHHH
Confidence 34999988 55 234455555544 4567889999999999999999999999999999998 8899999999999
Q ss_pred HHHHcCCHHHHHHHHHhcC
Q 006942 112 DAALYGHKDTFHYLLEVTH 130 (624)
Q Consensus 112 ~Aa~~g~~~iv~~Ll~~~~ 130 (624)
-|+..|+.+++..++.+..
T Consensus 94 EAv~~g~~q~i~~vlr~~~ 112 (560)
T KOG0522|consen 94 EAVSTGNEQIITEVLRHLK 112 (560)
T ss_pred HHHHcCCHHHHHHHHHHhH
Confidence 9999999999988887743
|
|
| >PF13606 Ank_3: Ankyrin repeat | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.4e-07 Score=58.04 Aligned_cols=27 Identities=41% Similarity=0.524 Sum_probs=14.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCC
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGV 132 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~ 132 (624)
|+||||+||+.|+.|++++|+++++++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 455555555555555555555555443
|
|
| >PF13606 Ank_3: Ankyrin repeat | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.2e-07 Score=57.50 Aligned_cols=27 Identities=33% Similarity=0.589 Sum_probs=25.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCC
Q 006942 71 HGHTAATLSAAKGNLRALKLLVKYNPD 97 (624)
Q Consensus 71 ~G~TpLh~Aa~~g~~~iv~~Ll~~~~~ 97 (624)
+|+||||+||+.|+.|+|++|++++++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gad 27 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGAD 27 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 589999999999999999999999887
|
|
| >KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.40 E-value=8.9e-07 Score=89.51 Aligned_cols=86 Identities=23% Similarity=0.290 Sum_probs=70.4
Q ss_pred HHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCC-CCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHH
Q 006942 33 IFHMIVELLIDAESDEAICLLDKLASKVDPETLARQD-NHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVH 111 (624)
Q Consensus 33 ~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d-~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh 111 (624)
-||-.++ .| +.+..-.||..| ++.|..+ ..|+||||.||+.|+..-+++|+-.+++ ++..|.+|+||+.
T Consensus 136 QLhasvR----t~---nlet~LRll~lG--A~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD-~~a~d~~GmtP~~ 205 (669)
T KOG0818|consen 136 QLHSSVR----TG---NLETCLRLLSLG--AQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGAD-PGAQDSSGMTPVD 205 (669)
T ss_pred HHHHHhh----cc---cHHHHHHHHHcc--cccCCCCcccCCchhHHHHhccchhhhhHHhhccCC-CCCCCCCCCcHHH
Confidence 3888888 88 888888888887 5555544 4588999999999999888888888888 8888899999999
Q ss_pred HHHHcCCHHHHHHHHHh
Q 006942 112 DAALYGHKDTFHYLLEV 128 (624)
Q Consensus 112 ~Aa~~g~~~iv~~Ll~~ 128 (624)
+|=..||.++.+-|++.
T Consensus 206 ~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 206 YARQGGHHELAERLVEI 222 (669)
T ss_pred HHHhcCchHHHHHHHHH
Confidence 99888988877777654
|
|
| >KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.1e-07 Score=93.55 Aligned_cols=95 Identities=20% Similarity=0.238 Sum_probs=84.1
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
..++ .-++++|+. .| ++..++.+.-.+ .+++.+|.+.+|+||+||..|+.+++|+|++.-...+..+|..
T Consensus 503 ~~~~-~i~~~~aa~----~G---D~~alrRf~l~g--~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw 572 (622)
T KOG0506|consen 503 ENDT-VINVMYAAK----NG---DLSALRRFALQG--MDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRW 572 (622)
T ss_pred cccc-hhhhhhhhh----cC---CHHHHHHHHHhc--ccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhcc
Confidence 4556 788999999 99 999998887776 7899999999999999999999999999999944446689999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcC
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTH 130 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~ 130 (624)
|.|||--|-..+|.+++++|-+.-.
T Consensus 573 ~rtPlDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 573 GRTPLDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred CCCcchHhHhcCcHHHHHHHHHHhc
Confidence 9999999999999999999987643
|
|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.2e-07 Score=99.16 Aligned_cols=87 Identities=24% Similarity=0.376 Sum_probs=78.4
Q ss_pred chhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCC-CCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCC
Q 006942 62 PETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRH-GEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDG 140 (624)
Q Consensus 62 ~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n-~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G 140 (624)
....|++|..|+|+||+|+..|..++++.|+.++.+ +..+| ..|.||||.|..+|+.|++-.||.++....+ +|++|
T Consensus 42 ~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGid-v~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i-~Dkeg 119 (1267)
T KOG0783|consen 42 QNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGID-VFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRI-KDKEG 119 (1267)
T ss_pred hhhhhHHHhhccceeeeeeccchhHHHHHHHhcCce-eeeccccccchHhhHhhhhchHHHHHHHHhcCCceEE-ecccC
Confidence 445789999999999999999999999999999998 44555 5699999999999999999999999988877 99999
Q ss_pred CcHHHHHHHh
Q 006942 141 ANVLSFLIAA 150 (624)
Q Consensus 141 ~t~Lh~A~~~ 150 (624)
..||..-++-
T Consensus 120 lsplq~~~r~ 129 (1267)
T KOG0783|consen 120 LSPLQFLSRV 129 (1267)
T ss_pred CCHHHHHhhc
Confidence 9999988763
|
|
| >KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.5e-07 Score=91.96 Aligned_cols=95 Identities=19% Similarity=0.140 Sum_probs=85.2
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHH
Q 006942 67 RQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSF 146 (624)
Q Consensus 67 ~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~ 146 (624)
.+++++..++.+||+.|++..++.+.-.+.+ +..+|.+..|+||.||..||.+++++|++........+|..|+|||--
T Consensus 501 ~~~~~~~i~~~~aa~~GD~~alrRf~l~g~D-~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDd 579 (622)
T KOG0506|consen 501 PRENDTVINVMYAAKNGDLSALRRFALQGMD-LETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDD 579 (622)
T ss_pred cccccchhhhhhhhhcCCHHHHHHHHHhccc-ccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchH
Confidence 4556777899999999999999999888888 789999999999999999999999999998765544499999999999
Q ss_pred HHHhCcHHHHHHHHHh
Q 006942 147 LIAANLYDVALDLLKR 162 (624)
Q Consensus 147 A~~~~~~~~v~~Ll~~ 162 (624)
|...+|.+++++|-+.
T Consensus 580 A~~F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 580 AKHFKHKEVVKLLEEA 595 (622)
T ss_pred hHhcCcHHHHHHHHHH
Confidence 9999999999988776
|
|
| >PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature | Back alignment and domain information |
|---|
Probab=98.36 E-value=5.4e-07 Score=58.17 Aligned_cols=26 Identities=35% Similarity=0.523 Sum_probs=13.0
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCC
Q 006942 72 GHTAATLSAAKGNLRALKLLVKYNPD 97 (624)
Q Consensus 72 G~TpLh~Aa~~g~~~iv~~Ll~~~~~ 97 (624)
|+||||+||..|+.+++++|++++++
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~ 27 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGAD 27 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSC
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCC
Confidence 44555555555555555555554444
|
Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A .... |
| >KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.00044 Score=75.67 Aligned_cols=107 Identities=18% Similarity=0.127 Sum_probs=72.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCC---CcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHH
Q 006942 71 HGHTAATLSAAKGNLRALKLLVKYNPD---LTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFL 147 (624)
Q Consensus 71 ~G~TpLh~Aa~~g~~~iv~~Ll~~~~~---l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A 147 (624)
.+.--.-.|+.+|+.-.|+..++.... .++..|.-|.++|++|..+.+.|+.++|+++.... ..+|-+|
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~a 95 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLA 95 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHH
Confidence 344556678888888888877776332 35567777888888888888888888888775433 2377788
Q ss_pred HHhCcHHHHHHHHHhCCCCC---------cccCCCCCCHHHHHHcCC
Q 006942 148 IAANLYDVALDLLKRHPTIG---------RDSIDSRRIILNTLAQKP 185 (624)
Q Consensus 148 ~~~~~~~~v~~Ll~~~~~l~---------~~~d~~G~TpLh~Aa~~~ 185 (624)
++.|..+.|+.++.+..... ...-..+.|||.+||...
T Consensus 96 I~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~N 142 (822)
T KOG3609|consen 96 IAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLN 142 (822)
T ss_pred HHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhc
Confidence 88888888888876643221 111234678888887664
|
|
| >KOG0522 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.34 E-value=7.1e-07 Score=91.54 Aligned_cols=108 Identities=16% Similarity=0.146 Sum_probs=86.0
Q ss_pred hHHHHHHHcCCHHH-HHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCc
Q 006942 74 TAATLSAAKGNLRA-LKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANL 152 (624)
Q Consensus 74 TpLh~Aa~~g~~~i-v~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~ 152 (624)
-|||.++.....+- .+.|...-...+..+|..|.||||+|+..||.+.++.|+..+++... +|++|+++||.|+..|+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~-kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSI-KNNEGWSPLHEAVSTGN 100 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccc-cccccccHHHHHHHcCC
Confidence 35999997776664 44444443445778999999999999999999999999999999988 99999999999999999
Q ss_pred HHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 006942 153 YDVALDLLKRHPTIGRDSIDSRRIILNTLA 182 (624)
Q Consensus 153 ~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa 182 (624)
..++..++.++......+-..+.-.|..+.
T Consensus 101 ~q~i~~vlr~~~~q~~~~~~~~~p~ll~~l 130 (560)
T KOG0522|consen 101 EQIITEVLRHLKYQAWEKWERRLPRLLAKL 130 (560)
T ss_pred HHHHHHHHHHhHHHHHHHHHhcchHHHHHH
Confidence 999999998876554444444555544443
|
|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.5e-06 Score=89.56 Aligned_cols=93 Identities=25% Similarity=0.248 Sum_probs=74.2
Q ss_pred hHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhcc--CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChH
Q 006942 32 TIFHMIVELLIDAESDEAICLLDKLASKVDPETLAR--QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLP 109 (624)
Q Consensus 32 T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~--~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TP 109 (624)
.-|.-|+. .. ++..+-.|+.+|....++. .+.+|.|+||+||+.|++.+.++|+=++.+ +..+|..|.||
T Consensus 626 qqLl~A~~----~~---Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d-v~~rda~g~t~ 697 (749)
T KOG0705|consen 626 QQLLRAVA----AE---DLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD-VMARDAHGRTA 697 (749)
T ss_pred HHHHHHHH----HH---HHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc-ceecccCCchh
Confidence 45667777 66 8888888888876555544 455677999999999999999998888887 77888889999
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCC
Q 006942 110 VHDAALYGHKDTFHYLLEVTHGV 132 (624)
Q Consensus 110 Lh~Aa~~g~~~iv~~Ll~~~~~~ 132 (624)
|.||=..|..|++..|+.+|...
T Consensus 698 l~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 698 LFYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred hhhHhhcccHHHHHHHHHcCCCc
Confidence 99998888899999888887643
|
|
| >PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.1e-06 Score=56.78 Aligned_cols=30 Identities=33% Similarity=0.507 Sum_probs=26.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCcc
Q 006942 105 EGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134 (624)
Q Consensus 105 ~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~ 134 (624)
+|.||||+|+..|+.+++++|++.+++++.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~ 30 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINA 30 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence 589999999999999999999999888776
|
Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A .... |
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.5e-06 Score=96.43 Aligned_cols=126 Identities=18% Similarity=0.170 Sum_probs=105.8
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHc-cCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASK-VDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHG 104 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~-~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~ 104 (624)
+-.| +|.||+++. .| +..+++.+++. + ......|.+|.-.+|+ |..++.+.+-+|+..+...++++|.
T Consensus 571 ~~r~-~lllhL~a~----~l---yawLie~~~e~~~--~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~ 639 (975)
T KOG0520|consen 571 NFRD-MLLLHLLAE----LL---YAWLIEKVIEWAG--SGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDR 639 (975)
T ss_pred CCcc-hHHHHHHHH----Hh---HHHHHHHHhcccc--cCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccC
Confidence 5678 999999999 99 99999999996 3 3335567777778888 7788999998888888877999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCccc-----cCCCCCcHHHHHHHhCcHHHHHHHHHh
Q 006942 105 EGFLPVHDAALYGHKDTFHYLLEVTHGVDIY-----SGKDGANVLSFLIAANLYDVALDLLKR 162 (624)
Q Consensus 105 ~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~-----~~~~G~t~Lh~A~~~~~~~~v~~Ll~~ 162 (624)
.|.||||+|+.+|+..++..|++.++..... ....|.|+--.|-.+|+..+.-+|-+.
T Consensus 640 ~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 640 NGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred CCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 9999999999999999999999887765433 556789999999999998887776554
|
|
| >KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.9e-06 Score=85.01 Aligned_cols=98 Identities=18% Similarity=0.172 Sum_probs=85.2
Q ss_pred hccCCCCCCh------HHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCC
Q 006942 65 LARQDNHGHT------AATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGK 138 (624)
Q Consensus 65 ~~~~d~~G~T------pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~ 138 (624)
+..+|.+|.| -||-.++.|+.+.+-.||..+++....--..|.||||+|++.|+..-+++|+-.|+++.. .|.
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a-~d~ 198 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA-QDS 198 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCC-CCC
Confidence 3456777766 489999999999999999998883333446799999999999999999999999999999 999
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhC
Q 006942 139 DGANVLSFLIAANLYDVALDLLKRH 163 (624)
Q Consensus 139 ~G~t~Lh~A~~~~~~~~v~~Ll~~~ 163 (624)
+|.||+.+|-..||.++++.|++..
T Consensus 199 ~GmtP~~~AR~~gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 199 SGMTPVDYARQGGHHELAERLVEIQ 223 (669)
T ss_pred CCCcHHHHHHhcCchHHHHHHHHHH
Confidence 9999999999999999999888653
|
|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.03 E-value=8.6e-06 Score=80.01 Aligned_cols=74 Identities=20% Similarity=0.177 Sum_probs=65.0
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q 006942 73 HTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLI 148 (624)
Q Consensus 73 ~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~ 148 (624)
+--|..||+.|+++.|+.|++.|.+ ++.+|....+||.+|+..||.++|++|+++|+.... ...+|...+.-|.
T Consensus 37 f~elceacR~GD~d~v~~LVetgvn-VN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~r-dtf~G~RC~YgaL 110 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVN-VNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSR-DTFDGDRCHYGAL 110 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCC-cchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccc-cccCcchhhhhhh
Confidence 4568999999999999999999888 899999999999999999999999999999998776 5667776654443
|
|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.5e-05 Score=82.47 Aligned_cols=85 Identities=18% Similarity=0.249 Sum_probs=69.6
Q ss_pred ccCCCHHHHHHHHHcCcc-cccccc-CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHH
Q 006942 2 IEKNDWQGVEDFVTNHPD-ALTAKI-VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLS 79 (624)
Q Consensus 2 a~~G~~~~v~~ll~~~~~-~~~~~~-~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~A 79 (624)
+...|+..+.-||.+... .++.++ +.+| +|+||+||+ .| +..+.++|+=++ .++..+|.+|+|+|.||
T Consensus 632 ~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~g-rt~LHLa~~----~g---nVvl~QLLiWyg--~dv~~rda~g~t~l~ya 701 (749)
T KOG0705|consen 632 VAAEDLQTAILLLAHGSREEVNETCGEGDG-RTALHLAAR----KG---NVVLAQLLIWYG--VDVMARDAHGRTALFYA 701 (749)
T ss_pred HHHHHHHHHHHHHhccCchhhhccccCCCC-cchhhhhhh----hc---chhHHHHHHHhC--ccceecccCCchhhhhH
Confidence 344567777777776432 233333 4566 999999999 99 999999999886 78899999999999999
Q ss_pred HHcCCHHHHHHHHhcCC
Q 006942 80 AAKGNLRALKLLVKYNP 96 (624)
Q Consensus 80 a~~g~~~iv~~Ll~~~~ 96 (624)
-+.|..+++..|+.++.
T Consensus 702 r~a~sqec~d~llq~gc 718 (749)
T KOG0705|consen 702 RQAGSQECIDVLLQYGC 718 (749)
T ss_pred hhcccHHHHHHHHHcCC
Confidence 99999999999999954
|
|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.71 E-value=3e-05 Score=86.91 Aligned_cols=91 Identities=24% Similarity=0.276 Sum_probs=80.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q 006942 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLI 148 (624)
Q Consensus 69 d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~ 148 (624)
-..|.|+||.|+..|..-+++.|++.+++ ++.+|..|.||+|.+...|+...+..|++++++.+. .+.+|.++|++|.
T Consensus 653 ~~~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a-~~~~~~~~l~~a~ 730 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKRGADPNA-FDPDGKLPLDIAM 730 (785)
T ss_pred hhcccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhccccccccc-cCccCcchhhHHh
Confidence 34678999999999999999999999998 899999999999999999999999999999999988 8999999999998
Q ss_pred HhCcHHHHHHHHH
Q 006942 149 AANLYDVALDLLK 161 (624)
Q Consensus 149 ~~~~~~~v~~Ll~ 161 (624)
...+.|.+..+.-
T Consensus 731 ~~~~~d~~~l~~l 743 (785)
T KOG0521|consen 731 EAANADIVLLLRL 743 (785)
T ss_pred hhccccHHHHHhh
Confidence 7777776655443
|
|
| >KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00014 Score=65.25 Aligned_cols=69 Identities=19% Similarity=0.209 Sum_probs=57.3
Q ss_pred hhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCC
Q 006942 63 ETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHG 131 (624)
Q Consensus 63 ~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~ 131 (624)
.++|.+|..|+|||+.|+..|+.+.|.+|++++...+..+|..|.+++.+|=+.|+.+++..|-+...+
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 467888888888888888888888888888888555888888888888888888888888888877443
|
|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.59 E-value=6e-05 Score=84.58 Aligned_cols=107 Identities=17% Similarity=0.116 Sum_probs=87.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHH
Q 006942 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFL 147 (624)
Q Consensus 68 ~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A 147 (624)
.+.++.+++..|.+.-+...+... ..-..|.|+||.|+.+|..-++++|++++++++. .+..|+||||.+
T Consensus 627 ~~~~~~~~~~~~~~~~~~~~~n~~---------~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~-~d~~g~~plh~~ 696 (785)
T KOG0521|consen 627 ASSDGECLPRIATALAHGCCENWP---------VVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNA-LDSKGRTPLHHA 696 (785)
T ss_pred hccCccchhhhhhhhcchhhhccc---------hhhhcccchhhhhhccchHHHHHHHHhcCCcchh-hhccCCCcchhh
Confidence 345677888777765554443322 1224588999999999999999999999999988 999999999999
Q ss_pred HHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCC
Q 006942 148 IAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185 (624)
Q Consensus 148 ~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~ 185 (624)
...|+...+..++++..+. ...+.+|.+||++|....
T Consensus 697 ~~~g~~~~~~~ll~~~a~~-~a~~~~~~~~l~~a~~~~ 733 (785)
T KOG0521|consen 697 TASGHTSIACLLLKRGADP-NAFDPDGKLPLDIAMEAA 733 (785)
T ss_pred hhhcccchhhhhccccccc-cccCccCcchhhHHhhhc
Confidence 9999999999999976654 677999999999997653
|
|
| >KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00023 Score=63.78 Aligned_cols=69 Identities=14% Similarity=0.102 Sum_probs=62.7
Q ss_pred cccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q 006942 19 DALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPD 97 (624)
Q Consensus 19 ~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~ 97 (624)
.+++.+ |..| +|||+.|+. .| +.+.|.+|+.++ -+.+...|..|.+++.+|-..|+.++|+.|-+...+
T Consensus 3 ~~in~r-D~fg-WTalmcaa~----eg---~~eavsyllgrg-~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 3 GNINAR-DAFG-WTALMCAAM----EG---SNEAVSYLLGRG-VAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCccch-hhhc-chHHHHHhh----hc---chhHHHHHhccC-cccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 356777 9999 999999999 99 999999999997 577899999999999999999999999999988554
|
|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00028 Score=78.86 Aligned_cols=128 Identities=9% Similarity=-0.003 Sum_probs=93.7
Q ss_pred HHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHh-cCCCcc
Q 006942 56 LASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV-THGVDI 134 (624)
Q Consensus 56 Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~-~~~~~~ 134 (624)
++...........+-.|.|-+|+++..++...++.+++.........|.+|.-.+|+ |..++.+.+-+|+.. +...+.
T Consensus 558 ~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i 636 (975)
T KOG0520|consen 558 LLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDI 636 (975)
T ss_pred HHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeeccccccc
Confidence 333332334555677899999999999999999999996222244666677777777 667777777776654 344555
Q ss_pred ccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCccc-----CCCCCCHHHHHHcCC
Q 006942 135 YSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDS-----IDSRRIILNTLAQKP 185 (624)
Q Consensus 135 ~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~-----d~~G~TpLh~Aa~~~ 185 (624)
+|..|+||||+|+..|+..++..|++.+.+-.... ...|.|+-.+|..+|
T Consensus 637 -~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g 691 (975)
T KOG0520|consen 637 -RDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANG 691 (975)
T ss_pred -ccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhccc
Confidence 99999999999999999999999997655433332 345888888887665
|
|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00097 Score=65.96 Aligned_cols=74 Identities=16% Similarity=0.067 Sum_probs=60.5
Q ss_pred hHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHH
Q 006942 32 TIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVH 111 (624)
Q Consensus 32 T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh 111 (624)
--|..||+ .| +.|.|++|++.| .++|..|...++||.+|+..||.++||+|+++|+- ...-.-+|.-. |
T Consensus 38 ~elceacR----~G---D~d~v~~LVetg--vnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAi-C~rdtf~G~RC-~ 106 (516)
T KOG0511|consen 38 GELCEACR----AG---DVDRVRYLVETG--VNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI-CSRDTFDGDRC-H 106 (516)
T ss_pred HHHHHHhh----cc---cHHHHHHHHHhC--CCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCc-ccccccCcchh-h
Confidence 35899999 99 999999999987 78899999999999999999999999999999884 32223345544 4
Q ss_pred HHHHc
Q 006942 112 DAALY 116 (624)
Q Consensus 112 ~Aa~~ 116 (624)
+++.+
T Consensus 107 YgaLn 111 (516)
T KOG0511|consen 107 YGALN 111 (516)
T ss_pred hhhhh
Confidence 44443
|
|
| >smart00248 ANK ankyrin repeats | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.0096 Score=35.76 Aligned_cols=24 Identities=33% Similarity=0.433 Sum_probs=11.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhc
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVT 129 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~ 129 (624)
|.||+|+|+..++.++++.|++.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~ 25 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKG 25 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC
Confidence 344444444444444444444443
|
Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. |
| >smart00248 ANK ankyrin repeats | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.01 Score=35.67 Aligned_cols=27 Identities=41% Similarity=0.626 Sum_probs=24.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCC
Q 006942 71 HGHTAATLSAAKGNLRALKLLVKYNPD 97 (624)
Q Consensus 71 ~G~TpLh~Aa~~g~~~iv~~Ll~~~~~ 97 (624)
+|.||+|+|+..|+.++++.|++.+.+
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 478999999999999999999998775
|
Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. |
| >KOG2505 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.014 Score=60.27 Aligned_cols=42 Identities=21% Similarity=0.186 Sum_probs=24.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLI 148 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~ 148 (624)
-.||||+|+..|..++|.+||+.++++.. +|..|.||...+.
T Consensus 430 tsT~LH~aa~qg~~k~v~~~Leeg~Dp~~-kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 430 TSTFLHYAAAQGARKCVKYFLEEGCDPST-KDGAGRTPYSLSA 471 (591)
T ss_pred cchHHHHHHhcchHHHHHHHHHhcCCchh-cccCCCCcccccc
Confidence 34566666666666666666666655555 5666666655554
|
|
| >KOG2505 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.081 Score=54.81 Aligned_cols=65 Identities=14% Similarity=0.013 Sum_probs=44.5
Q ss_pred HHHHHHHHHhcCCCccc-----cCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 119 KDTFHYLLEVTHGVDIY-----SGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 119 ~~iv~~Ll~~~~~~~~~-----~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
.+.+++|.++....+.. .+..-.|+||+|+..|.-.+|.++|+.. ..+..+|..|.||..+++.+
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg-~Dp~~kd~~Grtpy~ls~nk 473 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEG-CDPSTKDGAGRTPYSLSANK 473 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhc-CCchhcccCCCCcccccccH
Confidence 44566666666554332 3444567888888888888888888877 44567788888888877643
|
|
| >PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.8 Score=41.63 Aligned_cols=47 Identities=19% Similarity=0.249 Sum_probs=40.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhc
Q 006942 313 VAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQG 366 (624)
Q Consensus 313 tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 366 (624)
.-|..|+..|-...|.+.|+. |++.. .++|-.|+.++|.+|+.+++.
T Consensus 145 ~hl~~a~~kgll~F~letlky-gg~~~------~~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 145 QHLEKAAAKGLLPFVLETLKY-GGNVD------IIVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHHCCCHHHHHHHHHc-CCccc------HHHHHHHHHhhHHHHHHHhhc
Confidence 457789999999999999998 76653 389999999999999998864
|
These proteins may be involved in promoting survival of infected macrophages []. |
| >PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC | Back alignment and domain information |
|---|
Probab=92.27 E-value=0.78 Score=42.94 Aligned_cols=90 Identities=12% Similarity=0.122 Sum_probs=47.1
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCC----CChHHHHHH--HcCCHHHHHHHHhcCC---CCccc
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNH----GHTAATLSA--AKGNLRALKLLVKYNP---DLTNI 101 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~----G~TpLh~Aa--~~g~~~iv~~Ll~~~~---~l~~~ 101 (624)
.++|.+|.. .+ ..+++.+|+.... ...+|.- +.--+-++- -..+..++++.+++|- +-.-.
T Consensus 180 ~~Am~~si~----~~---K~dva~~lls~f~---ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~ 249 (284)
T PF06128_consen 180 HQAMWLSIG----NA---KEDVALYLLSKFN---FTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQ 249 (284)
T ss_pred HHHHHHHhc----cc---HHHHHHHHHhhcc---eecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhh
Confidence 466666666 88 8888888887641 1111110 111222222 2334455566665532 21222
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhcC
Q 006942 102 RHGEGFLPVHDAALYGHKDTFHYLLEVTH 130 (624)
Q Consensus 102 ~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~ 130 (624)
+-+.|.|-|--|..+++.+++.+|+++|+
T Consensus 250 ~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 250 KVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred ccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 33456666666666666666666666665
|
The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol []. |
| >PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC | Back alignment and domain information |
|---|
Probab=87.30 E-value=2.7 Score=39.53 Aligned_cols=90 Identities=13% Similarity=0.065 Sum_probs=66.1
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcC----CCCcccCCCCCChHHHHHHH--cCCHHHHHHHHHhcCCCccc---cCCCCCcH
Q 006942 73 HTAATLSAAKGNLRALKLLVKYN----PDLTNIRHGEGFLPVHDAAL--YGHKDTFHYLLEVTHGVDIY---SGKDGANV 143 (624)
Q Consensus 73 ~TpLh~Aa~~g~~~iv~~Ll~~~----~~l~~~~n~~G~TPLh~Aa~--~g~~~iv~~Ll~~~~~~~~~---~~~~G~t~ 143 (624)
.+++-+|..++..+++-+|+.+- .+...+.. +.--+-++.. ..+..++++.+++|-..... +-+.|.|.
T Consensus 180 ~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~--~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtM 257 (284)
T PF06128_consen 180 HQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEK--ELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTM 257 (284)
T ss_pred HHHHHHHhcccHHHHHHHHHhhcceecchhhhcCc--chhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchH
Confidence 47888999999999999999872 23232322 2223444433 34578999999998543322 67889999
Q ss_pred HHHHHHhCcHHHHHHHHHhCC
Q 006942 144 LSFLIAANLYDVALDLLKRHP 164 (624)
Q Consensus 144 Lh~A~~~~~~~~v~~Ll~~~~ 164 (624)
|--|+.+++.+++..||+++.
T Consensus 258 LDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 258 LDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred HHhHHhcCcHHHHHHHHHcCc
Confidence 999999999999999999876
|
The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol []. |
| >PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=86.39 E-value=1.2 Score=34.64 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=41.1
Q ss_pred cHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 312 SVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 312 ~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
..-+..|...|+.|+++.+++. + ..-...+..|+...+.+++++|++..
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~-~-------~~~~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKK-N-------KPDNDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHH-h-------ccHHHHHHHHHHHhhHHHHHHHHHhc
Confidence 4568999999999999999986 2 11266899999999999999998764
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ]. |
| >PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=84.87 E-value=2.1 Score=33.29 Aligned_cols=46 Identities=15% Similarity=0.147 Sum_probs=21.3
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHh
Q 006942 75 AATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128 (624)
Q Consensus 75 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~ 128 (624)
.+..|...|+.|+++.+++.+.. ....+..|+..-+-+++++|+++
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~~~--------~~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKNKP--------DNDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHhcc--------HHHHHHHHHHHhhHHHHHHHHHh
Confidence 34555555555555555433211 02345555555555555555544
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ]. |
| >cd07920 Pumilio Pumilio-family RNA binding domain | Back alignment and domain information |
|---|
Probab=83.66 E-value=26 Score=35.74 Aligned_cols=151 Identities=9% Similarity=0.037 Sum_probs=79.5
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchh-hccCCCCCChHHHHHHHcCCHHHHHHHHhc-CCCCc-ccC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPET-LARQDNHGHTAATLSAAKGNLRALKLLVKY-NPDLT-NIR 102 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~-~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~-~~~l~-~~~ 102 (624)
|.+| .-.|.-+.+ .+ ..+..+.+++...+.. --..|..|+-.+--....+..+-...+++. .+++. -..
T Consensus 18 ~~~g-sr~lQ~~l~----~~---~~~~~~~i~~~l~~~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~ 89 (322)
T cd07920 18 DQHG-SRFLQQKLE----EA---TPEEKELIFDEILPHVVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSL 89 (322)
T ss_pred Cchh-hHHHHHHhc----cC---CHHHHHHHHHHHHHhHHHHhcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcc
Confidence 6667 777777777 76 6665555555432222 223567777777766677766644444443 12211 135
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcCC--CccccCCCCCcHHHHHHHhCcHHHHHHHHHhCC--CCCcccCCCCCCHH
Q 006942 103 HGEGFLPVHDAALYGHKDTFHYLLEVTHG--VDIYSGKDGANVLSFLIAANLYDVALDLLKRHP--TIGRDSIDSRRIIL 178 (624)
Q Consensus 103 n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~--~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~--~l~~~~d~~G~TpL 178 (624)
|..|.-.+.-+...+..+-...+++.-.. .....|..|...+..+......+..+.+++.-. -.....+..|...+
T Consensus 90 ~~~g~~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~G~~vv 169 (322)
T cd07920 90 DMYGCRVIQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVALSTHPYGCRVI 169 (322)
T ss_pred cchhHHHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCccccHHH
Confidence 56676666666666654444444433211 111166777777777666655444444332211 11123456676666
Q ss_pred HHHHcC
Q 006942 179 NTLAQK 184 (624)
Q Consensus 179 h~Aa~~ 184 (624)
.-....
T Consensus 170 q~~l~~ 175 (322)
T cd07920 170 QRCLEH 175 (322)
T ss_pred HHHHHh
Confidence 665543
|
Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon |
| >PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues | Back alignment and domain information |
|---|
Probab=81.84 E-value=27 Score=33.06 Aligned_cols=11 Identities=27% Similarity=0.477 Sum_probs=8.6
Q ss_pred CCCCChhhhhh
Q 006942 428 DLKQTPREVFT 438 (624)
Q Consensus 428 ~~G~Tp~dl~~ 438 (624)
++|+|+.|+|-
T Consensus 43 k~G~tA~~lfG 53 (206)
T PF06570_consen 43 KKGKTARQLFG 53 (206)
T ss_pred hCCCcHHHHcC
Confidence 35888888886
|
However, these proteins contain predicted integral membrane proteins (with several transmembrane segments). |
| >cd07920 Pumilio Pumilio-family RNA binding domain | Back alignment and domain information |
|---|
Probab=81.54 E-value=20 Score=36.55 Aligned_cols=261 Identities=13% Similarity=0.067 Sum_probs=133.8
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhc-CCCC-cccCCCCCChHHHHHHHcCCHHHHHHHHHhcC--CCccccCCCCCcH
Q 006942 68 QDNHGHTAATLSAAKGNLRALKLLVKY-NPDL-TNIRHGEGFLPVHDAALYGHKDTFHYLLEVTH--GVDIYSGKDGANV 143 (624)
Q Consensus 68 ~d~~G~TpLh~Aa~~g~~~iv~~Ll~~-~~~l-~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~--~~~~~~~~~G~t~ 143 (624)
.|..|.-.|.-+...+..+..+.+.+. .|+. .-..|..|.--+.-....+..+-...+++.-. -.....+..|.-.
T Consensus 17 ~~~~gsr~lQ~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~v 96 (322)
T cd07920 17 KDQHGSRFLQQKLEEATPEEKELIFDEILPHVVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCRV 96 (322)
T ss_pred CCchhhHHHHHHhccCCHHHHHHHHHHHHHhHHHHhcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHHH
Confidence 455666667777776666666666555 2221 22456778888888888887765555554321 1112278888888
Q ss_pred HHHHHHhCcHHHHHHHHHhC-CC-CCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCC
Q 006942 144 LSFLIAANLYDVALDLLKRH-PT-IGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYH 221 (624)
Q Consensus 144 Lh~A~~~~~~~~v~~Ll~~~-~~-l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~ 221 (624)
+..+...+..+....+++.- +. .....|..|...+..+....+. ...+.++..
T Consensus 97 lqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~~l~~~~~-------~~~~~i~~~------------------ 151 (322)
T cd07920 97 IQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQKCIEKFPP-------EDLQFIIDA------------------ 151 (322)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHHHHHhCCH-------HHHHHHHHH------------------
Confidence 88888777655544444431 21 1224577888887777654210 111111100
Q ss_pred CCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcc
Q 006942 222 DLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVV 301 (624)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~ 301 (624)
+.+.-..+. ....+..-+..+.... .......++..+.+...
T Consensus 152 -----------------------------------l~~~~~~l~--~~~~G~~vvq~~l~~~-~~~~~~~l~~~l~~~~~ 193 (322)
T cd07920 152 -----------------------------------FKGNCVALS--THPYGCRVIQRCLEHC-SEEQREPLLEEILEHAL 193 (322)
T ss_pred -----------------------------------HHHHHHHHH--cCccccHHHHHHHHhC-CHHHHHHHHHHHHHHHH
Confidence 000000000 0000000001111100 01112223333333332
Q ss_pred cccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceec--CCCCCcHHHHHHHcCChh----HHHHHhcCCc-cccc-
Q 006942 302 WTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWS--NQDGHTIFDHAVLYRREK----VFNLIQGVNF-TTFL- 373 (624)
Q Consensus 302 ~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~--d~~G~T~Lh~A~~~~~~~----iv~~Ll~~~~-~~~~- 373 (624)
.+..|..|+.-+..+...+..+..+.+++..-++.... ++.|...+..+......+ +++.++.... .+.+
T Consensus 194 --~L~~d~~Gn~vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~k~Gs~Vve~~l~~~~~~~~~~ii~~l~~~~~~~~~l~ 271 (322)
T cd07920 194 --ELVQDQFGNYVVQHVLELGDPDDTSRIIEKLLGNIVQLSCHKFASNVVEKCLKHASKEERELIIDEILASGNETSALD 271 (322)
T ss_pred --HHhcCCchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHCCHHHHHHHHHHHhcCCCchhHHH
Confidence 33367788888888888887654444444312222322 899999999888887643 4444443210 0111
Q ss_pred cccccCCCCchhhhhhhcCC
Q 006942 374 FSSRDKAGNNILHLAGRLVP 393 (624)
Q Consensus 374 vn~~D~~GnTpLHlAa~~~~ 393 (624)
-=..|..||-.+..+...++
T Consensus 272 ~l~~d~~Gn~Viq~~l~~~~ 291 (322)
T cd07920 272 TLMKDQYGNYVIQTALDVAK 291 (322)
T ss_pred HHhCCCcccHHHHHHHHhCC
Confidence 11578889988888887765
|
Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 624 | ||||
| 2p2c_P | 169 | Inhibition Of Caspase-2 By A Designed Ankyrin Repea | 3e-04 |
| >pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.3 bits (145), Expect = 1e-09
Identities = 93/559 (16%), Positives = 180/559 (32%), Gaps = 166/559 (29%)
Query: 123 HYLLEVTHGVDIYSGKDGANVL--SFLIAANLYDVALDLLKR--------HPTIGRDSID 172
H+ ++ G Y KD +V +F+ + DV D+ K H + +D++
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDV-QDMPKSILSKEEIDHIIMSKDAVS 62
Query: 173 SRRIILNTLAQKP----YAFASGSRLGRLQRLIYNCI--PVEKELV-PSIQTNDY---HD 222
+ TL K F + + R+ Y + P++ E PS+ T Y D
Sbjct: 63 GTLRLFWTLLSKQEEMVQKF-----VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD 117
Query: 223 -LDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSP------- 274
L D + F +K + +R + + L A + L P
Sbjct: 118 RLYNDNQVF---AKYNV---SR---------------LQPYLKLRQALLELRPAKNVLID 156
Query: 275 GIKGIHDQKLTHM--RTVEIVRIICEGVVWTNF--QNSAQLSVAMLAAAILGIPEVVNEF 330
G+ G + + ++ + + W N NS + + ML
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK------------ 204
Query: 331 IMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGR 390
+ Y NW+++ DH+ + + IQ L S+ N +L L
Sbjct: 205 -LLYQIDPNWTSRS-----DHSSNIKLR--IHSIQ--AELRRLLKSKPYE-NCLLVL--L 251
Query: 391 LVPSSEVAGAALQMQRELQWFKAIEN----LVHPFFREATNDLK-QTPREVFTEEHKELV 445
V +++ + A L+ F++ T+ L T + + H +
Sbjct: 252 NVQNAKA-------------WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298
Query: 446 KEGE------KWLKETASS-----CSVVAALIITVVFAAVFTAPGGSDGRGMP-NFLH-- 491
E K+L + +++ A DG N+ H
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTT-NPRRLSI-IAESI-----RDGLATWDNWKHVN 351
Query: 492 -DQSFMIFAIS-------------DMLALF---SSITSVLMFLGIL---TSRYAEEDFLV 531
D+ I S D L++F + I ++L L ++ + +
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL--LSLIWFDVIKSDVMVVVN 409
Query: 532 SL---------PKKLIIGLITLFFSIASMMVAFGATVHISLSHKWNSVIIPIALVGCVPI 582
L PK+ I + +++ + + + +H S+ +N +P
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLEL-KVKLENEYALHRSIVDHYN-----------IPK 457
Query: 583 TLFALLQFPLLLDMYSSTY 601
T + P LD Y ++
Sbjct: 458 TFDSDDLIPPYLDQYFYSH 476
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 1e-04
Identities = 67/438 (15%), Positives = 130/438 (29%), Gaps = 118/438 (26%)
Query: 45 ESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP------DL 98
+ + +L KL ++DP +R D+ + + + + LR L Y ++
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253
Query: 99 TNIRHGEGF------------LPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSF 146
N + F V D T H L+ H + + ++L
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFL--SAATTTHISLD--HHSMTLTPDEVKSLLLK 309
Query: 147 LIAANLYDVALDLLKRHP----TIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIY 202
+ D+ ++L +P I S R L T + +L +I
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSIIAE----SIRDGLATWDNWKHVNCD-----KLTTIIE 360
Query: 203 NCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLH 262
+ + L P+ + L + F ++ I + + I + +++KLH
Sbjct: 361 SSL---NVLEPAEYRKMFDRL--SV--FPPSAHIPTILLSLIWF-DVIKSDVMVVVNKLH 412
Query: 263 R--ML--WNAXMHLSPGIKGIHDQKLT-----------HMRTVEIVRIICEGVVWTNFQN 307
+ ++ +S I L H V+ I F +
Sbjct: 413 KYSLVEKQPKESTIS-----IPSIYLELKVKLENEYALHRSIVDHYNIPK------TFDS 461
Query: 308 SAQLSVAM-----------LAAAILGIPEVVNEFIMAY-D----------SSSNWSNQDG 345
+ + L E + F M + D S+ W+
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHP--ERMTLFRMVFLDFRFLEQKIRHDSTAWNASGS 519
Query: 346 HT------------IFDHAVLYRREKVFNLIQGVNF----TTFLFSSRDKAGNNILHLAG 389
I D+ Y R V ++ +F L S+ ++L +A
Sbjct: 520 ILNTLQQLKFYKPYICDNDPKYER-LVNAIL---DFLPKIEENLICSKYT---DLLRIA- 571
Query: 390 RLVPSSEVAG-AALQMQR 406
+ + A Q+QR
Sbjct: 572 LMAEDEAIFEEAHKQVQR 589
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 57.5 bits (140), Expect = 7e-09
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 21/127 (16%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+V+LL++ ++ + GHT ++A +G++ + L++
Sbjct: 95 MVKLLLENNAN------------PN-----LATTAGHTPLHIAAREGHVETVLALLEKEA 137
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYS-GKDGANVLSFLIAANLYDV 155
+GF P+H AA YG LLE + GK+G L + N D+
Sbjct: 138 SQ-ACMTKKGFTPLHVAAKYGKVRVAELLLE--RDAHPNAAGKNGLTPLHVAVHHNNLDI 194
Query: 156 ALDLLKR 162
LL R
Sbjct: 195 VKLLLPR 201
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 2e-07
Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 23/115 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+V LL+ +++ + G T L A +G++ +L+K+
Sbjct: 260 MVALLLSKQAN-----------------GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGV 302
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI-YSGKDGANVLSFLIAA 150
+ + G+ P+H A+ YG+ +LL+ H D+ K G + L AA
Sbjct: 303 MV-DATTRMGYTPLHVASHYGNIKLVKFLLQ--HQADVNAKTKLGYSPLH--QAA 352
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 52.1 bits (126), Expect = 3e-07
Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 20/98 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+ ELL++ ++ + +G T ++ NL +KLL+
Sbjct: 161 VAELLLERDAH------------PN-----AAGKNGLTPLHVAVHHNNLDIVKLLLPRGG 203
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
+ G+ P+H AA + LL+ +G
Sbjct: 204 SP-HSPAWNGYTPLHIAAKQNQVEVARSLLQ--YGGSA 238
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 51.7 bits (125), Expect = 4e-07
Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 23/115 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
IV+ L+ + + + T ++A G+ K L++
Sbjct: 29 IVKNLLQRGAS------------PN-----VSNVKVETPLHMAARAGHTEVAKYLLQNKA 71
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI-YSGKDGANVLSFLIAA 150
+ N + + P+H AA GH + LLE + + + G L IAA
Sbjct: 72 KV-NAKAKDDQTPLHCAARIGHTNMVKLLLE--NNANPNLATTAGHTPL--HIAA 121
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 51.3 bits (124), Expect = 5e-07
Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 22/134 (16%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+ ++LI V + G+T +++ GN++ +K L+++
Sbjct: 293 VADVLIKH--------------GVMVDA---TTRMGYTPLHVASHYGNIKLVKFLLQHQA 335
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVLSFLIAANLYDV 155
D+ N + G+ P+H AA GH D LL+ +G DG L+ V
Sbjct: 336 DV-NAKTKLGYSPLHQAAQQGHTDIVTLLLK--NGASPNEVSSDGTTPLAIAKRLGYISV 392
Query: 156 ALDLLKRHPTIGRD 169
D+LK
Sbjct: 393 T-DVLKVVTDETSF 405
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 8e-07
Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 21/105 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
IV+LL+ P +G+T ++A + + + L++Y
Sbjct: 194 IVKLLLPR--------------GGSPH---SPAWNGYTPLHIAAKQNQVEVARSLLQYGG 236
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDG 140
N +G P+H AA GH + LL + G K G
Sbjct: 237 SA-NAESVQGVTPLHLAAQEGHAEMVALLLS--KQANGNLGNKSG 278
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 48.6 bits (117), Expect = 4e-06
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
G T +++ G+L +K L++ N+ + + P+H AA GH + YLL+
Sbjct: 10 GGESGLTPLHVASFMGHLPIVKNLLQRGASP-NVSNVKVETPLHMAARAGHTEVAKYLLQ 68
Query: 128 VTHGVDI 134
+ +
Sbjct: 69 --NKAKV 73
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 4e-08
Identities = 10/111 (9%), Positives = 24/111 (21%), Gaps = 8/111 (7%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+ + L+ L + + T+ +A L+LL +
Sbjct: 259 LTKELLQKTDV----FLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLD 314
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI-YSGKDGANVLSF 146
++ G L + + A +
Sbjct: 315 EV-VRSLNTGAGGAVKRKKKAAPAVKRMKLA--PSAPVRTRSRSRARSSAV 362
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 9e-07
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 58 SKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYG 117
K++ D+ ++A KG ++ L++ I++ G +H A +G
Sbjct: 9 PKLNRIK---SDDENMEKIHVAARKGQTDEVRRLIETGVSP-TIQNRFGCTALHLACKFG 64
Query: 118 HKDTFHYLLEVTHGVDIYSGKDG 140
DT YL G S G
Sbjct: 65 CVDTAKYLAS--VGEVH-SLWHG 84
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 23/120 (19%), Positives = 36/120 (30%), Gaps = 27/120 (22%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
V LI+ Q+ G TA L+ G + K L
Sbjct: 35 EVRRLIETGVS------------PT-----IQNRFGCTALHLACKFGCVDTAKYLASVGE 77
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVA 156
++ HG+ P+H A + D L+E + G S L + +V
Sbjct: 78 VH-SLWHGQ--KPIHLAVMANKTDLVVALVE--GAKE-----RGQMPESLLNECDEREVN 127
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 3e-05
Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 24/135 (17%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
++++L+ + +D T + N AL L++ P
Sbjct: 155 MIKILVQLGAS------------PT-----AKDKADETPLMRAMEFRNREALDLMMDTVP 197
Query: 97 DL----TNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVLSFLIAAN 151
+ + +G +H A L +D +E G+D+ + L + A
Sbjct: 198 SKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVE--MGIDVNMEDNEHTVPLYLSVRAA 255
Query: 152 LYDVALDLLKRHPTI 166
+ + +LL++
Sbjct: 256 MVLLTKELLQKTDVF 270
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 4e-05
Identities = 11/79 (13%), Positives = 19/79 (24%), Gaps = 14/79 (17%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLT------------NIRHGEGFLPVHDAAL 115
+DN LS + K L++ V AA
Sbjct: 240 EDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAAD 299
Query: 116 YGHKDTFHYLLEVTHGVDI 134
++ L E ++
Sbjct: 300 PSKQEVLQLLQE--KLDEV 316
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137 | Back alignment and structure |
|---|
Score = 50.1 bits (121), Expect = 1e-07
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 21/126 (16%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
VE L+ SD + +D+ G T + G+L+ ++LL+++
Sbjct: 25 SVEYLLQNGSD------------PN-----VKDHAGWTPLHEACNHGHLKVVELLLQHKA 67
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVLSFLIAANLYDV 155
+ N + P+HDAA GH D LL +G + G + + ++ +
Sbjct: 68 LV-NTTGYQNDSPLHDAAKNGHVDIVKLLLS--YGASRNAVNIFGLRPVDYTDDESMKSL 124
Query: 156 ALDLLK 161
L K
Sbjct: 125 LLLPEK 130
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137 | Back alignment and structure |
|---|
Score = 45.1 bits (108), Expect = 6e-06
Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128
++ G T +++ KG++ +++ L++ D N++ G+ P+H+A +GH LL+
Sbjct: 7 NHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQ- 64
Query: 129 THGVDI 134
H +
Sbjct: 65 -HKALV 69
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 2e-07
Identities = 12/99 (12%), Positives = 29/99 (29%), Gaps = 8/99 (8%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLR-ALKLLVKYN 95
+L+ D + ++ + H A + + +
Sbjct: 93 CACVLLQPRPSHPRDASDTYLT----QSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWR 148
Query: 96 PDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
L + +G P+H A ++ + L + G D+
Sbjct: 149 LQL-EAENYDGHTPLHVAVIHKDAEMVRLLRD--AGADL 184
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 9e-07
Identities = 17/141 (12%), Positives = 33/141 (23%), Gaps = 31/141 (21%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
++ L+ E L Q++ G TA L+A G ++ L
Sbjct: 24 FLDFLLGF--------------SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI--------------YSGKDGAN 142
+ + G +H A LL+ +
Sbjct: 70 GV-LVAERGGHTALHLACRVRAHTCACVLLQ--PRPSHPRDASDTYLTQSQDCTPDTSHA 126
Query: 143 VLSFLIAANLYDVALDLLKRH 163
+ N + +
Sbjct: 127 PAAVDSQPNPENEEEPRDEDW 147
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 3e-06
Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 20/126 (15%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+V LL DA +D ++ + G T L+ L+LL+K
Sbjct: 173 MVRLLRDAGAD------------LN----KPEPTCGRTPLHLAVEAQAASVLELLLKAGA 216
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYS-GKDGANVLSFLIAANLYDV 155
D R G P+ A L + L HG G D + S + + D
Sbjct: 217 DP-TARMYGGRTPLGSALLRPNPILARLLRA--HGAPEPEDGGDKLSPCSSSGSDSDSDN 273
Query: 156 ALDLLK 161
+ +
Sbjct: 274 RDEGDE 279
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 9e-06
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 65 LARQDNHGHTAATLSAAKGNLRALKLLVKY--NPDLTNIRHGEGFLPVHDAALYGHKDTF 122
G TA L+ + L L+ + + ++++ G +H AA+ G T
Sbjct: 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61
Query: 123 HYLLEVTHGVDI 134
L G +
Sbjct: 62 EKLYA--AGAGV 71
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 4e-05
Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
++ GHT ++ + ++LL DL G P+H A LL+
Sbjct: 154 ENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLK 213
Query: 128 VTHGVDI 134
G D
Sbjct: 214 --AGADP 218
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 | Back alignment and structure |
|---|
Score = 50.5 bits (122), Expect = 2e-07
Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 19/98 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
++ + + V+ + D G T ++A G + ++ L+++
Sbjct: 17 QLKEHLRKG-----------DNLVN-----KPDERGFTPLIWASAFGEIETVRFLLEWGA 60
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D +I E + A+ G+ D LLE VDI
Sbjct: 61 DP-HILAKERESALSLASTGGYTDIVGLLLE--RDVDI 95
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 | Back alignment and structure |
|---|
Score = 49.7 bits (120), Expect = 3e-07
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 20/98 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
IV LL++ VD D +G T + +++ ++ L+
Sbjct: 84 IVGLLLER--------------DVDINI---YDWNGGTPLLYAVRGNHVKCVEALLARGA 126
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
DL G+ P+ A G++ + H + +
Sbjct: 127 DL-TTEADSGYTPMDLAVALGYRKVQQVIEN--HILKL 161
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 | Back alignment and structure |
|---|
Score = 49.3 bits (119), Expect = 4e-07
Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 20/98 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
V L++ +D +A +L++ G + LL++ +
Sbjct: 51 TVRFLLEWGAD------------PH-----ILAKERESALSLASTGGYTDIVGLLLERDV 93
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D+ NI G P+ A H LL G D+
Sbjct: 94 DI-NIYDWNGGTPLLYAVRGNHVKCVEALLA--RGADL 128
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 | Back alignment and structure |
|---|
Score = 46.6 bits (112), Expect = 3e-06
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 72 GHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHG 131
+ AA+G L LK ++ +L N GF P+ A+ +G +T +LLE G
Sbjct: 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLE--WG 59
Query: 132 VDI 134
D
Sbjct: 60 ADP 62
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 2e-07
Identities = 23/99 (23%), Positives = 34/99 (34%), Gaps = 21/99 (21%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAA-KGNLRALKLLVKYN 95
+ ELL+ ++ + D T AA +G L L +L +
Sbjct: 59 VAELLLLHGAE------------PN-----CADPATLTRPVHDAAREGFLDTLVVLHRAG 101
Query: 96 PDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
L ++R G LPV A GH+D YL
Sbjct: 102 ARL-DVRDAWGRLPVDLAEELGHRDVARYLRA--AAGGT 137
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 | Back alignment and structure |
|---|
Score = 52.1 bits (126), Expect = 2e-07
Identities = 27/128 (21%), Positives = 44/128 (34%), Gaps = 21/128 (16%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
IV+LL+ +D V +D G + + G+ +LL+K+
Sbjct: 73 IVQLLLQHGAD------------VH-----AKDKGGLVPLHNACSYGHYEVTELLLKHGA 115
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYS-GKDGANVLSFLIAANLYDV 155
+ N F P+H+AA + LL HG D G + + L +
Sbjct: 116 CV-NAMDLWQFTPLHEAASKNRVEVCSLLLS--HGADPTLVNCHGKSAVDMAPTPELRER 172
Query: 156 ALDLLKRH 163
K H
Sbjct: 173 LTYEFKGH 180
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 6e-06
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 68 QDNHGHTAATLSAAKGNL-RALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLL 126
+ +A GN + + LL N + + G P+H AA Y LL
Sbjct: 20 TGEYKKDELLEAARSGNEEKLMALLTPLNVNC-HASDGRKSTPLHLAAGYNRVRIVQLLL 78
Query: 127 EVTHGVDI 134
+ HG D+
Sbjct: 79 Q--HGADV 84
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 6e-06
Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 22/111 (19%)
Query: 37 IVELLIDAES----------DEAICLLDKLASKVDPETLARQDNHGHTA---ATLSAAKG 83
+ S + L +Q TA A S
Sbjct: 172 RLTYEFKGHSLLQAAREADLAKVKKTLALEIINF------KQPQSHETALHCAVASLHPK 225
Query: 84 NLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
+ +LL++ ++ N ++ + P+H AA H D L + HG +
Sbjct: 226 RKQVAELLLRKGANV-NEKNKDFMTPLHVAAERAHNDVMEVLHK--HGAKM 273
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 6e-06
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
++ T ++A + + +++L K+ + N G +H AAL GH T LL
Sbjct: 243 KNKDFMTPLHVAAERAHNDVMEVLHKHGAKM-NALDSLGQTALHRAALAGHLQTCRLLLS 301
Query: 128 VTHGVDI 134
+G D
Sbjct: 302 --YGSDP 306
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 4e-07
Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 25/111 (22%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
I E L+ A D +D G+T L+ +G L ++ +L +
Sbjct: 60 IAEALLGAGCD-----------------PELRDFRGNTPLHLACEQGCLASVGVLTQSCT 102
Query: 97 DLT-----NIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGAN 142
+ G +H A+++G+ L+ G D+ + ++ N
Sbjct: 103 TPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS--LGADVNA-QEPCN 150
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 6e-05
Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 3/72 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
Q+N T L+ + L+ D +R G P+H A G + L +
Sbjct: 41 QNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLACEQGCLASVGVLTQ 99
Query: 128 VTHGVDIYSGKD 139
+
Sbjct: 100 --SCTTPHLHSI 109
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 19/98 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
IVELL+ +D V+ A++ +G TA L+ N + LL+K
Sbjct: 132 IVELLVSLGAD------------VN----AQEPCNGRTALHLAVDLQNPDLVSLLLKCGA 175
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D+ N +G+ P L + ++
Sbjct: 176 DV-NRVTYQGYSPYQLTWGRPSTRIQQQLGQ--LTLEN 210
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 6e-04
Identities = 10/70 (14%), Positives = 21/70 (30%), Gaps = 5/70 (7%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKY---NPDLTNIRHGEGFLPVHDAALYGHKDTFHY 124
G + L+ +++ + N ++ P+H A + +
Sbjct: 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEA 63
Query: 125 LLEVTHGVDI 134
LL G D
Sbjct: 64 LLG--AGCDP 71
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 | Back alignment and structure |
|---|
Score = 49.3 bits (119), Expect = 4e-07
Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 20/98 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+VE L+ +D +A +L+ +KG +K+L+
Sbjct: 51 VVEFLLQNGAD------------PQ-----LLGKGRESALSLACSKGYTDIVKMLLDCGV 93
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D+ N G P+ A H LLE G D
Sbjct: 94 DV-NEYDWNGGTPLLYAVHGNHVKCVKMLLE--SGADP 128
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 | Back alignment and structure |
|---|
Score = 48.9 bits (118), Expect = 6e-07
Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 20/98 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+ I+ E+ ++ D G T +AA G + ++ L++
Sbjct: 18 YLATRIEQENV------------IN-----HTDEEGFTPLMWAAAHGQIAVVEFLLQNGA 60
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D + + A G+ D LL+ GVD+
Sbjct: 61 DP-QLLGKGRESALSLACSKGYTDIVKMLLD--CGVDV 95
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 | Back alignment and structure |
|---|
Score = 47.4 bits (114), Expect = 2e-06
Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 20/98 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
IV++L+D VD D +G T + +++ +K+L++
Sbjct: 84 IVKMLLDC--------------GVDVNE---YDWNGGTPLLYAVHGNHVKCVKMLLESGA 126
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D I G+ + A G++ + H + +
Sbjct: 127 DP-TIETDSGYNSMDLAVALGYRSVQQVIES--HLLKL 161
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 | Back alignment and structure |
|---|
Score = 47.4 bits (114), Expect = 2e-06
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 71 HGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTH 130
+ AA+G + L ++ + N EGF P+ AA +G +LL+ +
Sbjct: 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQ--N 58
Query: 131 GVDIYS-GKDGANVLSFLIAA 150
G D GK + LS +A
Sbjct: 59 GADPQLLGKGRESALS--LAC 77
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156 | Back alignment and structure |
|---|
Score = 48.9 bits (118), Expect = 5e-07
Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 11/90 (12%)
Query: 46 SDEAICLLDKLASKVDPETLARQDNHGHTAATL-SAAKGNLRALKLLVKYNPDLTNIRHG 104
E LL + D + G TA L G+ L+K N++
Sbjct: 15 VQEVRRLLHRELVHPD-----ALNRFGKTA--LQVMMFGSTAIALELLKQGASP-NVQDT 66
Query: 105 EGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
G PVHDAA G DT L+E HG D+
Sbjct: 67 SGTSPVHDAARTGFLDTLKVLVE--HGADV 94
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156 | Back alignment and structure |
|---|
Score = 45.5 bits (109), Expect = 7e-06
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
QD G + +A G L LK+LV++ D+ N+ G G LP+H A GH +L
Sbjct: 64 QDTSGTSPVHDAARTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAA 122
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156 | Back alignment and structure |
|---|
Score = 39.3 bits (93), Expect = 8e-04
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 19/91 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+++L++ +D V+ D G L+ +G+ + L
Sbjct: 83 TLKVLVEHGAD------------VN-----VPDGTGALPIHLAVQEGHTAVVSFLAA-ES 124
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
DL + R G P+ A G +D L
Sbjct: 125 DL-HRRDARGLTPLELALQRGAQDLVDILQG 154
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 5e-07
Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 21/100 (21%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKY-- 94
IV+ L+ + V+ D+ G T +A+ N++ K LV+
Sbjct: 85 IVKFLVQFGVN------------VN-----AADSDGWTPLHCAASCNNVQVCKFLVESGA 127
Query: 95 NPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
+ + G+ +L +
Sbjct: 128 AVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG--VQEKM 165
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 9/73 (12%), Positives = 17/73 (23%), Gaps = 18/73 (24%)
Query: 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHG-------EGFLPVHDAALYGHKDT 121
+ G + + I HG + D++L G D
Sbjct: 2 EITGQVSLPPGKRTNLRKTGSER---------IAHGMRVKFNPLPLALLLDSSLEGEFDL 52
Query: 122 FHYLLEVTHGVDI 134
++ D
Sbjct: 53 VQRIIY--EVDDP 63
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
++ G TA + G+ +K LV++ ++ N +G+ P+H AA + +L+E
Sbjct: 66 PNDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVE 124
Query: 128 VTHGVDI 134
G +
Sbjct: 125 --SGAAV 129
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 5e-05
Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128
+ S+ +G ++ ++ D ++ + EG +H+A GH + +L++
Sbjct: 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQ- 91
Query: 129 THGVDI 134
GV++
Sbjct: 92 -FGVNV 96
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136 | Back alignment and structure |
|---|
Score = 48.2 bits (116), Expect = 6e-07
Identities = 23/98 (23%), Positives = 34/98 (34%), Gaps = 21/98 (21%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAA-KGNLRALKLLVKYN 95
+ ELL+ ++ + D T AA +G L L +L +
Sbjct: 59 VAELLLLHGAE------------PN-----CADPATLTRPVHDAAREGFLDTLVVLHRAG 101
Query: 96 PDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVD 133
L ++ G LPV A GH+D YL D
Sbjct: 102 ARL-DVCDAWGRLPVDLAEEQGHRDIARYLHA--ATGD 136
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 2e-04
Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+AA+G + ++ L++ D N + G P+ G LL
Sbjct: 8 LGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMM-MGSAQVAELLLL 65
Query: 128 VTHGVDI 134
HG +
Sbjct: 66 --HGAEP 70
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 | Back alignment and structure |
|---|
Score = 50.1 bits (121), Expect = 6e-07
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 19/98 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+V+ I + VD + T + +G+L + L+KY
Sbjct: 57 LVKYYISKGAI------------VD----QLGGDLNSTPLHWATRQGHLSMVVQLMKYGA 100
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D ++ GEG +H AA +GH YL+ G D+
Sbjct: 101 DP-SLIDGEGCSCIHLAAQFGHTSIVAYLIA--KGQDV 135
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 | Back alignment and structure |
|---|
Score = 47.4 bits (114), Expect = 4e-06
Identities = 12/66 (18%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Query: 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128
D++ + G + LV+ D+ E +H AA+ D Y +
Sbjct: 6 DDYSTWDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYIS- 63
Query: 129 THGVDI 134
G +
Sbjct: 64 -KGAIV 68
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 7e-06
Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 21/106 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGN-LRALKLLVKYN 95
IV LI D VD D +G T +A + + + +LL+ +N
Sbjct: 124 IVAYLIAKGQD------------VD-----MMDQNGMTPLMWAAYRTHSVDPTRLLLTFN 166
Query: 96 PDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDG 140
+ +H A L G+ LLE G ++ + G
Sbjct: 167 VSVNLGDKYHKNTALHWAVLAGNTTVISLLLE--AGANVDAQNIKG 210
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 7e-05
Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 21/103 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
LL+ V+ H +TA + GN + LL++
Sbjct: 158 PTRLLLTFNVS------------VN----LGDKYHKNTALHWAVLAGNTTVISLLLEAGA 201
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKD 139
++ + ++ +G + A + ++L E G D
Sbjct: 202 NV-DAQNIKGESALDLAKQRKNVWMINHLQE--ARQAK--GYD 239
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 8e-05
Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 20/109 (18%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
L++A D V + D T +A + +K +
Sbjct: 24 RCRELVEAGYD------------VR-----QPDKENVTLLHWAAINNRIDLVKYYISKGA 66
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVL 144
+ + P+H A GH L++ +G D +G + +
Sbjct: 67 IVDQLGGDLNSTPLHWATRQGHLSMVVQLMK--YGADPSLIDGEGCSCI 113
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 6e-07
Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 21/104 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
V LL+ + V P ++ + +A +G++ + L+ Y
Sbjct: 140 CVNLLLQHGAS------------VQP------ESDLASPIHEAARRGHVECVNSLIAYGG 181
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDG 140
++ + + P++ A + LLE G D+ GK
Sbjct: 182 NI-DHKISHLGTPLYLACENQQRACVKKLLE--SGADVNQGKGQ 222
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 1e-06
Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 22/114 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+ LI V+ + + G+L +K+L+K+
Sbjct: 74 SLRNLISQGWA------------VN-----IITADHVSPLHEACLGGHLSCVKILLKHGA 116
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAA 150
+ N + P+ +A + G D + LL+ HG + D A+ + AA
Sbjct: 117 QV-NGVTADWHTPLFNACVSGSWDCVNLLLQ--HGASVQPESDLASPIH--EAA 165
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 18/130 (13%), Positives = 39/130 (30%), Gaps = 28/130 (21%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKY-- 94
V LI + +D + +H T L+ +K L++
Sbjct: 172 CVNSLIAYGGN------------ID-----HKISHLGTPLYLACENQQRACVKKLLESGA 214
Query: 95 NPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVLSFLIAANLY 153
+ + P+H ++ L++ G D + +G + +
Sbjct: 215 DVNQGK----GQDSPLHAVVRTASEELACLLMD--FGADTQAKNAEGKRPVE--LVPPES 266
Query: 154 DVALDLLKRH 163
+A L+R
Sbjct: 267 PLAQLFLERE 276
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 4e-05
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+ +A G+ +L+ L+ + NI + P+H+A L GH LL+
Sbjct: 55 DAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLK 113
Query: 128 VTHGVDI 134
HG +
Sbjct: 114 --HGAQV 118
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 1e-06
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 67 RQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLL 126
R G TA ++AAKG LKLL++ D+ NI+ +G+ P+H AA +G ++ L+
Sbjct: 194 RHAKSGGTALHVAAAKGYTEVLKLLIQARYDV-NIKDYDGWTPLHAAAHWGKEEACRILV 252
Query: 127 EVTHGVDIYSG-KDGANVLSFLIAA-NLYDVALDLLKRH 163
E + D+ + K G +A ++ +L K+
Sbjct: 253 E--NLCDMEAVNKVGQTAFD--VADEDILGYLEELQKKQ 287
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 4e-06
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 25/130 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
V L++ D + G TA + N+ +K LV+
Sbjct: 55 EVLRLLE--------------RGADINY---ANVDGLTALHQACIDDNVDMVKFLVENGA 97
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVLSFLIAA--NLY 153
++ N EG++P+H AA G+ D YL+ G + + +G L IA +
Sbjct: 98 NI-NQPDNEGWIPLHAAASCGYLDIAEYLIS--QGAHVGAVNSEGDTPL--DIAEEEAME 152
Query: 154 DVALDLLKRH 163
++ + + R
Sbjct: 153 ELLQNEVNRQ 162
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 1e-04
Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Query: 65 LARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHY 124
+ RQ A A + L + + G +H AA G+ +
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHIND-VRHAKSGGTALHVAAAKGYTEVLKL 217
Query: 125 LLEVTHGVDI 134
L++ D+
Sbjct: 218 LIQ--ARYDV 225
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201 | Back alignment and structure |
|---|
Score = 48.6 bits (117), Expect = 1e-06
Identities = 11/84 (13%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+ + + + ++L + + EG P++ A + L++
Sbjct: 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQV-DEVDTEGNTPLNIAVHNNDIEIAKALID 60
Query: 128 VTHGVDIYS-GKDGANVLSFLIAA 150
G DI + L A
Sbjct: 61 --RGADINLQNSISDSPY--LYAG 80
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201 | Back alignment and structure |
|---|
Score = 42.8 bits (102), Expect = 1e-04
Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 20/99 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
I + LID +D ++ Q++ + + A+G L ++K+
Sbjct: 54 IAKALIDRGAD------------IN-----LQNSISDSPYLYAGAQGRTEILAYMLKHAT 96
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHG-VDI 134
N + G + AA GH D LLE G DI
Sbjct: 97 PDLNKHNRYGGNALIPAAEKGHIDNVKLLLE--DGREDI 133
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 1e-06
Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 3/93 (3%)
Query: 65 LARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHY 124
+A G + + + L N G +H AA Y D
Sbjct: 16 IASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKR 75
Query: 125 LLEVTHGVDIYSG-KDGANVLSFLIAANLYDVA 156
LLE D G L ++A+ V
Sbjct: 76 LLE--ASADANIQDNMGRTPLHAAVSADAQGVF 106
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 7e-06
Identities = 18/100 (18%), Positives = 29/100 (29%), Gaps = 24/100 (24%)
Query: 37 IVELLID--AESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKY 94
+L+ A D Q+N T L+A +G+ K+L+ +
Sbjct: 172 AAVVLLKNGANKDM-------------------QNNREETPLFLAAREGSYETAKVLLDH 212
Query: 95 NPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
+ +I LP A H D L
Sbjct: 213 FANR-DITDHMDRLPRDIAQERMHHDIVRLLDL--EHHHH 249
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 5e-05
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+ + G T L+A L+ L+ + D+ N G +H AA + D LL+
Sbjct: 120 RMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLK 178
Query: 128 VTHGVDI 134
+G +
Sbjct: 179 --NGANK 183
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 | Back alignment and structure |
|---|
Score = 42.8 bits (102), Expect = 1e-04
Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 19/98 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+ L++A +D + QDN G T + + ++L++
Sbjct: 72 AAKRLLEASAD------------AN-----IQDNMGRTPLHAAVSADAQGVFQILIRNRA 114
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
+ R +G P+ AA + L+ D+
Sbjct: 115 TDLDARMHDGTTPLILAARLAVEGMLEDLIN--SHADV 150
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-06
Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 3/96 (3%)
Query: 66 ARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYL 125
+ + +A G +++L+ D+ + G P+H AA GH + L
Sbjct: 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLL 76
Query: 126 LEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLK 161
LE G D+ + + N + ++L+
Sbjct: 77 LE--AGADVXAQDKFGKTAFDISIDNGNEDLAEILQ 110
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 | Back alignment and structure |
|---|
Score = 47.8 bits (115), Expect = 1e-06
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 47 DEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEG 106
LD + ++ + D+HG + + +G +++L+ + N+ +
Sbjct: 19 VAVRLWLDNTENDLN-----QGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGD 72
Query: 107 FLPVHDAALYGHKDTFHYLLEVTHGVDI 134
P+H AA +GH+D LL+ + DI
Sbjct: 73 DTPLHLAASHGHRDIVQKLLQ--YKADI 98
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 | Back alignment and structure |
|---|
Score = 47.0 bits (113), Expect = 3e-06
Identities = 14/66 (21%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Query: 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128
+GN A++L + + N GF P+H A G L+
Sbjct: 2 SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIM- 60
Query: 129 THGVDI 134
G I
Sbjct: 61 -RGARI 65
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 | Back alignment and structure |
|---|
Score = 45.5 bits (109), Expect = 8e-06
Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 20/98 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
IV+ L+ K D + HG+ + G + + LV
Sbjct: 87 IVQKLLQY--------------KADINA---VNEHGNVPLHYACFWGQDQVAEDLVANGA 129
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
+ +I + G +PV A + + G ++
Sbjct: 130 LV-SICNKYGEMPVDKAKAPLRELLRERAEK--MGQNL 164
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 1e-06
Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 11/97 (11%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPET------LARQDNHGHTAATLSAAKGNLRALKL 90
+V L++ A A+ T + ++ ++A + G L+
Sbjct: 151 VVTYLLENPHQPA----SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR 206
Query: 91 LVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
L I + +G P+ AA G + F ++L+
Sbjct: 207 LCPTVQLE-EISNHQGLTPLKLAAKEGKIEIFRHILQ 242
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 8e-05
Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 17/98 (17%)
Query: 52 LLDKLASKVDPET--LARQDNHGHTA---ATLSAAKGNLRALKLLVKYNPDL-------- 98
LL+ L T + + G T A L+ G + L++ + D
Sbjct: 21 LLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80
Query: 99 --TNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
+G +H A L+E +G D+
Sbjct: 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVE--NGADV 116
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 8e-05
Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 26/119 (21%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+ L+ + D A D + GH+A ++ K +L+ +KLLV+
Sbjct: 61 CIMPLLQIDKDSGNPKPLVNAQCTD------EFYQGHSALHIAIEKRSLQCVKLLVENGA 114
Query: 97 DL------------TNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANV 143
D+ G LP+ AA D YLLE + A++
Sbjct: 115 DVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE--------NPHQPASL 165
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115 | Back alignment and structure |
|---|
Score = 46.2 bits (111), Expect = 2e-06
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 20/98 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
V+ L+ +D V+ + G+T L+A G+ +KLL+
Sbjct: 24 EVKKLLSKGAD------------VN-----ARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D+ N R +G P H A GH + L G D+
Sbjct: 67 DV-NARSKDGNTPEHLAKKNGHHEIVKLLDA--KGADV 101
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115 | Back alignment and structure |
|---|
Score = 43.9 bits (105), Expect = 1e-05
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128
G+T +A G+ +K L+ D+ N R +G P+H AA GH + LL
Sbjct: 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLA- 63
Query: 129 THGVDI 134
G D+
Sbjct: 64 -KGADV 68
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123 | Back alignment and structure |
|---|
Score = 46.6 bits (112), Expect = 2e-06
Identities = 26/126 (20%), Positives = 38/126 (30%), Gaps = 25/126 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
V+ + D V+ R G +A G L L+ L+
Sbjct: 22 EVKDYVAKGED------------VN-----RTLEGGRKPLHYAADCGQLEILEFLLLKGA 64
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVLSFLIAANLYDV 155
D+ N P+ A GH LL G D DG L+ A + +
Sbjct: 65 DI-NAPDKHHITPLLSAVYEGHVSCVKLLLS--KGADKTVKGPDG---LTAFEATDNQAI 118
Query: 156 ALDLLK 161
LL+
Sbjct: 119 -KALLQ 123
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123 | Back alignment and structure |
|---|
Score = 43.9 bits (105), Expect = 1e-05
Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Query: 66 ARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYL 125
+ + G+L +K V D+ N G P+H AA G + +L
Sbjct: 1 GPLGSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFL 59
Query: 126 LEVTHGVDI 134
L G DI
Sbjct: 60 LL--KGADI 66
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 | Back alignment and structure |
|---|
Score = 48.2 bits (116), Expect = 2e-06
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 19/98 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
V+ LI A + VD +D G T L+A KG+ ++ L+
Sbjct: 59 AVKYLIKAGAL------------VD-----PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ 101
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
N + G+ P+ A Y H D LL G DI
Sbjct: 102 MDVNCQDDGGWTPMIWATEYKHVDLVKLLLS--KGSDI 137
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 | Back alignment and structure |
|---|
Score = 47.8 bits (115), Expect = 3e-06
Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 21/126 (16%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+V+LL+ SD ++ +DN + +A G + ++L+
Sbjct: 126 LVKLLLSKGSD------------IN-----IRDNEENICLHWAAFSGCVDIAEILLAAKC 168
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVLSFLIAANLYDV 155
DL + + G P+H AA D L D+ K+G L +
Sbjct: 169 DL-HAVNIHGDSPLHIAARENRYDCVVLFLS--RDSDVTLKNKEGETPLQCASLNSQVWS 225
Query: 156 ALDLLK 161
AL + K
Sbjct: 226 ALQMSK 231
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 | Back alignment and structure |
|---|
Score = 47.8 bits (115), Expect = 3e-06
Identities = 13/78 (16%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+ + + +A G++ +LV+ ++ + + P+ +AA H + YL++
Sbjct: 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANI-DTCSEDQRTPLMEAAENNHLEAVKYLIK 65
Query: 128 VTHGVDIYSG-KDGANVL 144
G + +G+ L
Sbjct: 66 --AGALVDPKDAEGSTCL 81
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 | Back alignment and structure |
|---|
Score = 47.0 bits (113), Expect = 6e-06
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 19/98 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+V+ L+ V+ QD+ G T + ++ +KLL+
Sbjct: 92 VVQYLLSNG-----------QMDVN-----CQDDGGWTPMIWATEYKHVDLVKLLLSKGS 135
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D+ NIR E + +H AA G D LL D+
Sbjct: 136 DI-NIRDNEENICLHWAAFSGCVDIAEILLA--AKCDL 170
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 3e-06
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
D HGH+A+ + A N+R + L+ N+ E P+H AA LL
Sbjct: 27 ADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLLENE--FPLHQAATLEDTKIVKILLF 83
Query: 128 VTHGVDI 134
G+D
Sbjct: 84 --SGLDD 88
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 7e-05
Identities = 11/99 (11%), Positives = 23/99 (23%), Gaps = 22/99 (22%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHG-HTAATLSAAKGNLRALKLLVKYN 95
V+L + + G T+ + ++ + +
Sbjct: 110 TVKLFVKKNWR------------LM-----FYGKTGWKTSFYHAVMLNDVSIVSYFLSEI 152
Query: 96 PDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
P +H GH D LL+ +
Sbjct: 153 PS--TFDLAILLSCIHITIKNGHVDMMILLLD--YMTST 187
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 4e-04
Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 71 HGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTH 130
+A + + +K+L+ D + +G ++ A G+ T ++
Sbjct: 61 ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVK--K 117
Query: 131 GVDI-YSGKDG 140
+ + GK G
Sbjct: 118 NWRLMFYGKTG 128
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 4e-04
Identities = 11/99 (11%), Positives = 30/99 (30%), Gaps = 28/99 (28%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAA-TLSAAKGNLRALKLLVKYN 95
++ LL+D + + ++ L+ ++ L+ L KY+
Sbjct: 176 MMILLLDYMTS------------TN-----TNNSLLFIPDIKLAIDNKDIEMLQALFKYD 218
Query: 96 PDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
++ + L + ++E V+
Sbjct: 219 INI-YS-------ANLENVLLDDAEIAKMIIE--KHVEY 247
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 | Back alignment and structure |
|---|
Score = 46.6 bits (112), Expect = 3e-06
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 68 QDNHGHTAATL-SAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLL 126
Q+ G TA L GN + L+ + +++ GF +HDAA G DT LL
Sbjct: 34 QNGFGRTA--LQVMKLGNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGFLDTLQTLL 90
Query: 127 EVTHGVDI 134
E D+
Sbjct: 91 E--FQADV 96
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 | Back alignment and structure |
|---|
Score = 43.1 bits (103), Expect = 5e-05
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+DN G+ L+A +G+LR ++ LVK+ R+ +G A LYG + +
Sbjct: 99 EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 158
Query: 128 VTHG 131
+G
Sbjct: 159 --NG 160
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 5e-06
Identities = 13/69 (18%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKY--NPDLTNIRHGEGFLPVHDAALYGHKDTFHYL 125
+D G S + L+ N +L + G+ P H A G+ + L
Sbjct: 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSL 91
Query: 126 LEVTHGVDI 134
+ D+
Sbjct: 92 YDRPLKPDL 100
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 1e-05
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+D +A+ G+L+ ++LL N + +G+ P+ A GH D L+E
Sbjct: 136 KDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVE 195
Query: 128 VTHGVDI 134
+G +
Sbjct: 196 -KYGAEY 201
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 4e-05
Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 19/100 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLV--KY 94
I L+ + D+ G T ++ + GNL +K L
Sbjct: 51 ITSFLLSK--------------MENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPL 96
Query: 95 NPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
PDL N +G +H A + +L+E +G +
Sbjct: 97 KPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIE--NGASV 133
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 5e-06
Identities = 22/99 (22%), Positives = 30/99 (30%), Gaps = 11/99 (11%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
E LI EA + A D D +T L+ R + L+K
Sbjct: 140 KSEDLI---VHEAKECIAAGA---DVNA---MDCDENTPLMLAVLARRRRLVAYLMKAGA 190
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLE-VTHGVDI 134
D I + +H AA Y+L DI
Sbjct: 191 DP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI 228
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 9e-06
Identities = 12/92 (13%), Positives = 26/92 (28%), Gaps = 4/92 (4%)
Query: 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128
++ GN E + +H A G +
Sbjct: 58 QHYSLYPNPQGYGNGNDFLGDFNHTNLQIP-TEPEPESPIKLHTEA-AGSYAITEPITR- 114
Query: 129 THGVDIYSGKDGANVLSFLIAANLYDVALDLL 160
V+I + VL ++ + + + + DL+
Sbjct: 115 -ESVNIIDPRHNRTVLHWIASNSSAEKSEDLI 145
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 10/67 (14%), Positives = 19/67 (28%), Gaps = 3/67 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
QD G T L+A +G + + L++ + A H +
Sbjct: 309 QDEDGKTPIMLAAQEGRIEVVMYLIQQGASV-EAVDATDHTARQLAQANNHHNIVDIFDR 367
Query: 128 VTHGVDI 134
+
Sbjct: 368 --CRPER 372
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93 | Back alignment and structure |
|---|
Score = 43.9 bits (105), Expect = 6e-06
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 18/92 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+V+LL++A +D V+ +D +G T L+A G+L +KLL++
Sbjct: 17 VVKLLLEAGAD------------VN-----AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128
D+ N + G P+H AA GH + LLE
Sbjct: 60 DV-NAKDKNGRTPLHLAARNGHLEVVKLLLEA 90
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126 | Back alignment and structure |
|---|
Score = 44.6 bits (107), Expect = 7e-06
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 20/98 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+V+LL++A +D V+ +D +G T L+A G+L +KLL++
Sbjct: 17 VVKLLLEAGAD------------VN-----AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D+ N + G P+H AA GH + LLE G D+
Sbjct: 60 DV-NAKDKNGRTPLHLAARNGHLEVVKLLLE--AGADV 94
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126 | Back alignment and structure |
|---|
Score = 41.9 bits (100), Expect = 6e-05
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 20/95 (21%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+V+LL++A +D V+ +D +G T L+A G+L +KLL++
Sbjct: 50 VVKLLLEAGAD------------VN-----AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHG 131
D+ N + G P+H AA GH + LLE G
Sbjct: 93 DV-NAKDKNGRTPLHLAARNGHLEVVKLLLE--AG 124
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126 | Back alignment and structure |
|---|
Score = 40.8 bits (97), Expect = 2e-04
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 71 HGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTH 130
+G T L+A G+L +KLL++ D+ N + G P+H AA GH + LLE
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLE--A 57
Query: 131 GVDI 134
G D+
Sbjct: 58 GADV 61
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 7e-06
Identities = 19/117 (16%), Positives = 32/117 (27%), Gaps = 13/117 (11%)
Query: 47 DEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEG 106
++ + L +K + + N + + + + L+ D+ R EG
Sbjct: 20 EDFLELFEKGYEDKESV---LKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEG 75
Query: 107 FLPVHDAALYGHKDTFH------YLLEVTHGVDI-YSGKDGANVLSFLIAANLYDVA 156
G D LE G DI K V+ I D
Sbjct: 76 TTLFFPLFQGGGNDITGTTELCKIFLE--KGADITALYKPYKIVVFKNIFNYFVDEN 130
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 11/91 (12%), Positives = 24/91 (26%), Gaps = 5/91 (5%)
Query: 72 GHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE--GFLPVHDAALYGHKDTFHYLLEVT 129
+ + +A G L + + + + + +L+
Sbjct: 6 EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLIN-- 63
Query: 130 HGVDI-YSGKDGANVLSFLIAANLYDVALDL 159
G DI K+G + L D+
Sbjct: 64 KGADIKSRTKEGTTLFFPLFQGGGNDITGTT 94
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 17/139 (12%), Positives = 36/139 (25%), Gaps = 31/139 (22%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGN------LRALKL 90
I LI+ +D + + G T G K+
Sbjct: 57 ISMFLINKGAD------------IK-----SRTKEGTTLFFPLFQGGGNDITGTTELCKI 99
Query: 91 LVKYNPDLTNIRHGEGFLPVHDAALYGHKDT-----FHYLLEVTHGVDIYSG-KDGANVL 144
++ D+ + + V D + L+ G+ + K G L
Sbjct: 100 FLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTAL 158
Query: 145 SFLIAANLYDVALDLLKRH 163
F+ +++ +
Sbjct: 159 EFVKRCQKPIAL-KMMEDY 176
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 9e-04
Identities = 3/74 (4%), Positives = 13/74 (17%), Gaps = 10/74 (13%)
Query: 68 QDNHGHTAATLSAAKGNLRALK-------LLVKYNPDLTNIRHGEGFLPVHDAALYGHKD 120
+ + + + + L I+ G +
Sbjct: 110 LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL-LIKDKWGLTALEFVKRCQKPI 168
Query: 121 TFHYLLEVTHGVDI 134
+ + +
Sbjct: 169 ALKMMED--YIKKY 180
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 7e-06
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 20/98 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
IVELL+ +D + +G T L+A G+++ LKL +
Sbjct: 54 IVELLLRHGAD------------PV-----LRKKNGATPFLLAAIAGSVKLLKLFLSKGA 96
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D+ N GF +AA+YG +L + G ++
Sbjct: 97 DV-NECDFYGFTAFMEAAVYGKVKALKFLYK--RGANV 131
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 1e-05
Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 21/107 (19%)
Query: 29 GSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRAL 88
+ I LL+D +D V+ + G T L+ K +L +
Sbjct: 193 SDDSDVEAITHLLLDHGAD------------VN-----VRGERGKTPLILAVEKKHLGLV 235
Query: 89 K-LLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
+ LL + + ++ N +G + A K L + G
Sbjct: 236 QRLLEQEHIEI-NDTDSDGKTALLLAVELKLKKIAELLCK--RGAST 279
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 2e-05
Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 19/98 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+V+ L++ ++ V+ +++ G T + ++LL+++
Sbjct: 20 LVQQLLEGGAN------------VN----FQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D +R G P AA+ G L G D+
Sbjct: 64 DP-VLRKKNGATPFLLAAIAGSVKLLKLFLS--KGADV 98
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 9e-05
Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 28/118 (23%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKY-- 94
+++L + +D V+ D +G TA +A G ++ALK L K
Sbjct: 87 LLKLFLSKGAD------------VN-----ECDFYGFTAFMEAAVYGKVKALKFLYKRGA 129
Query: 95 -------NPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVL 144
+ G + DAA GH + LL+ G D+ + G N L
Sbjct: 130 NVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD-EMGADVNACDNMGRNAL 186
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 6e-04
Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 14/75 (18%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHG--------EGFLPVHDAALYGHK 119
DN G A + + ++ + L + HG G P+ A H
Sbjct: 178 CDNMGRNALIHALLSSDDSDVEAITHL---L--LDHGADVNVRGERGKTPLILAVEKKHL 232
Query: 120 DTFHYLLEVTHGVDI 134
LLE ++I
Sbjct: 233 GLVQRLLE-QEHIEI 246
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 7e-06
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE-GFLPVHDAALYGHKDTFHYLL 126
D +G TA A G+ + ++LL + DL + R G +H AA Y + L+
Sbjct: 72 VDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVRPEVVEALV 130
Query: 127 EVTHGVDI 134
E G DI
Sbjct: 131 E--LGADI 136
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 1e-04
Identities = 11/69 (15%), Positives = 19/69 (27%), Gaps = 7/69 (10%)
Query: 66 ARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYL 125
+R G + G+ + D+ + E P AA + L
Sbjct: 8 SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS----EYETPWWTAARKADEQALSQL 63
Query: 126 LEVTHGVDI 134
L D+
Sbjct: 64 L---EDRDV 69
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 2e-04
Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 20/108 (18%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
V LL +A +D +D R G TA ++A ++ LV+
Sbjct: 91 CVRLLAEAGAD------------LD----HRDMRGGLTALHMAAGYVRPEVVEALVELGA 134
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVL 144
D+ + G + A ++ G I + NVL
Sbjct: 135 DI-EVEDERGLTALELAREILKTTPKGNPMQ--FGRRIGL-EKVINVL 178
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169 | Back alignment and structure |
|---|
Score = 45.0 bits (108), Expect = 1e-05
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 20/98 (20%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
IVE+L+ +D V+ D+ G T L+A G+L +++L+K
Sbjct: 62 IVEVLLKNGAD------------VN-----AVDHAGMTPLRLAALFGHLEIVEVLLKNGA 104
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D+ N EG P+H AA++GH + LL+ +G D+
Sbjct: 105 DV-NANDMEGHTPLHLAAMFGHLEIVEVLLK--NGADV 139
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169 | Back alignment and structure |
|---|
Score = 43.5 bits (104), Expect = 4e-05
Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 63 ETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTF 122
+ +A G +++L+ D+ N G+ P+H AA GH +
Sbjct: 5 HHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIV 63
Query: 123 HYLLEVTHGVDI 134
LL+ +G D+
Sbjct: 64 EVLLK--NGADV 73
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169 | Back alignment and structure |
|---|
Score = 40.4 bits (96), Expect = 4e-04
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 20/93 (21%)
Query: 37 IVELLIDAESD-EAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYN 95
IVE+L+ +D A D GHT L+A G+L +++L+K
Sbjct: 95 IVEVLLKNGADVNA------------------NDMEGHTPLHLAAMFGHLEIVEVLLKNG 136
Query: 96 PDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128
D+ N + G + G++D L ++
Sbjct: 137 ADV-NAQDKFGKTAFDISIDNGNEDLAEILQKL 168
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 13/76 (17%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
Q+ G TA +A KG ++LL+ ++R+ E L A
Sbjct: 136 QNKLGDTALHAAAWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQG 194
Query: 128 VTHGVDIYSGKDGANV 143
+
Sbjct: 195 --TDAVRTLSNAEDYL 208
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 21/99 (21%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLV-KYN 95
+ +D V+ D G TA + G+ +++L + N
Sbjct: 88 WLRECLDNRVG------------VN-----GLDKAGSTALYWACHGGHKDIVEMLFTQPN 130
Query: 96 PDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
+L N ++ G +H AA G+ D LL G
Sbjct: 131 IEL-NQQNKLGDTALHAAAWKGYADIVQLLLA--KGART 166
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 21/88 (23%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
IV+LL+ + D ++ A ++ LK +
Sbjct: 155 IVQLLLAKGAR------------TD-----LRNIEKKLAFDMATNAACASLLKKKQGTDA 197
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHY 124
+ + E +L D+ L H H+
Sbjct: 198 VR-TLSNAEDYLDDEDSDLEHH---HHH 221
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 8/67 (11%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+ T +KG L+ N + P+H+AA G+ L+
Sbjct: 41 ITDMSDTNWWKGTSKGRT----GLIPSN--YVAEQAESIDNPLHEAAKRGNLSWLRECLD 94
Query: 128 VTHGVDI 134
+ V +
Sbjct: 95 --NRVGV 99
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE-GFLPVHDAALYGHKDTFHYLL 126
D +G TA A G+ + ++LL + DL + R G +H AA Y + L+
Sbjct: 73 VDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVRPEVVEALV 131
Query: 127 EVTHGVDI 134
E G DI
Sbjct: 132 E--LGADI 137
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 19/98 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
V LL +A +D +D R G TA ++A ++ LV+
Sbjct: 92 CVRLLAEAGAD------------LD----HRDMRGGLTALHMAAGYVRPEVVEALVELGA 135
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D+ + G + A ++ G I
Sbjct: 136 DI-EVEDERGLTALELAREILKTTPKGNPMQ--FGRRI 170
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 7e-04
Identities = 11/69 (15%), Positives = 19/69 (27%), Gaps = 7/69 (10%)
Query: 66 ARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYL 125
+R G + G+ + D+ + E P AA + L
Sbjct: 9 SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS----EYETPWWTAARKADEQALSQL 64
Query: 126 LEVTHGVDI 134
L D+
Sbjct: 65 L---EDRDV 70
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 13/117 (11%)
Query: 47 DEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEG 106
+ + ++ DP + G TA + N + L+ ++ N G
Sbjct: 35 EVVQQAVKEMN---DPSQ---PNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHG 87
Query: 107 FLPVHDAALYGHKDTFHYLLEVTHGVDIY--SGKDGANVLSFLIAANLYDVALDLLK 161
+ P+H AA L++ HG I+ + DGA + D
Sbjct: 88 WTPLHCAASCNDTVICMALVQ--HGAAIFATTLSDGATAF--EKCDPYREGYADCAT 140
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 | Back alignment and structure |
|---|
Score = 45.1 bits (108), Expect = 2e-05
Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 15/98 (15%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+ L+ A LD A ++ G TA ++ ++LL++
Sbjct: 94 CLRALL---DSAAPGTLDLEA----------RNYDGLTALHVAVNTECQETVQLLLERGA 140
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
D+ + G P+ A LL+ HG ++
Sbjct: 141 DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQ--HGANV 176
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 4e-05
Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Query: 67 RQDNHGHTAATLSAAKGNLRALKLLVKYNPDL---TNIRHGEGFLPVHDAALYGHKDTFH 123
R D G T ++ +GNL A+ LV +I + P+H A +
Sbjct: 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVR 63
Query: 124 YLLEVTHGVDI 134
L+ G
Sbjct: 64 LLVT--AGASP 72
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 7e-04
Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
Q G +A ++ +G L ++ LV+ D ++++ P+ A D
Sbjct: 179 QMYSGSSALHSASGRGLLPLVRTLVRSGADS-SLKNCHNDTPLMVARSRRVIDILRGKAT 237
Query: 128 VTHG 131
Sbjct: 238 --RP 239
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 67 RQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLL 126
+D++ TA +AAKGNL+ + +L+ Y NI+ EG P+H A + +L+
Sbjct: 134 AKDHYDATAMHRAAAKGNLKMVHILLFYKAST-NIQDTEGNTPLHLACDEERVEEAKFLV 192
Query: 127 EVTHGVDIYSGKDGANVLSFLIAANLYDVALDLL 160
G I ++ +A + L L
Sbjct: 193 T--QGASI-YIENKEEKTPLQVAKGGLGLILKRL 223
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 1e-04
Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 21/139 (15%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
IVE L+ V+ +D+ G + ++A+ G +K L+
Sbjct: 55 IVEFLLQLGVP------------VN-----DKDDAGWSPLHIAASAGXDEIVKALLVKGA 97
Query: 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI-YSGKDGANVLSFLIAANLYDV 155
+ N + G P+H AA + LLE G + A + A +
Sbjct: 98 HV-NAVNQNGCTPLHYAASKNRHEIAVMLLE--GGANPDAKDHYDATAMHRAAAKGNLKM 154
Query: 156 ALDLLKRHPTIGRDSIDSR 174
LL + +
Sbjct: 155 VHILLFYKASTNIQDTEGN 173
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 6e-04
Identities = 14/106 (13%), Positives = 33/106 (31%), Gaps = 4/106 (3%)
Query: 70 NHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVT 129
L+ + + ++ + +H A GH + +LL+
Sbjct: 5 VSNIMICNLAYSGKLDELKERILADKSLA-TRTDQDSRTALHWACSAGHTEIVEFLLQ-- 61
Query: 130 HGVDIYS-GKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSR 174
GV + G + L +A ++ LL + + + +
Sbjct: 62 LGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGC 107
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 | Back alignment and structure |
|---|
Score = 44.3 bits (106), Expect = 3e-05
Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+D++ T ++ G A+ LV+ L + EG + A LL
Sbjct: 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLS 89
Query: 128 VTHGVDI 134
G ++
Sbjct: 90 --KGSNV 94
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 | Back alignment and structure |
|---|
Score = 44.3 bits (106), Expect = 3e-05
Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+D G TA + L + L+ ++ N + G P+ + ++G+ + ++LLE
Sbjct: 64 KDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSIIFGYSEMSYFLLE 122
Query: 128 VTHGVDI 134
HG ++
Sbjct: 123 --HGANV 127
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 | Back alignment and structure |
|---|
Score = 41.6 bits (99), Expect = 2e-04
Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 9/69 (13%)
Query: 66 ARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYL 125
+ D +G + K + L L N R P+ A + G ++ L
Sbjct: 2 SHMDKNGEIVEKIKDEKSINQNLDFLR-------NYRDSYNRTPLMVACMLGMENAIDKL 54
Query: 126 LEVTHGVDI 134
+E + +
Sbjct: 55 VE--NFDKL 61
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 | Back alignment and structure |
|---|
Score = 41.2 bits (98), Expect = 3e-04
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
++ G T +++ G +K L++ D+ + R G A ++G ++ E
Sbjct: 130 RNLEGETPLIVASKYGRSEIVKKLLELGADI-SARDLTGLTAEASARIFGRQEVIKIFTE 188
Query: 128 V 128
V
Sbjct: 189 V 189
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 | Back alignment and structure |
|---|
Score = 44.7 bits (107), Expect = 3e-05
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
Q+N T L+A +G+ K+L+ + + +I LP A H D L E
Sbjct: 154 QNNREETPLFLAAREGSYETAKVLLDHFANR-DITDHMDRLPRDIAQERMHHDIVRLLDE 212
Query: 128 VTHGVDI 134
+ +
Sbjct: 213 --YNLVR 217
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 | Back alignment and structure |
|---|
Score = 44.3 bits (106), Expect = 4e-05
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+ + G T L+A L+ L+ + D+ N G +H AA + D LL+
Sbjct: 88 RMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLK 146
Query: 128 VTHGVDI 134
+G +
Sbjct: 147 --NGANK 151
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 | Back alignment and structure |
|---|
Score = 42.4 bits (101), Expect = 2e-04
Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
QDN G T + + ++L++ + R +G P+ AA + L+
Sbjct: 54 QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN 113
Query: 128 VTHGVDI 134
D+
Sbjct: 114 --SHADV 118
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165 | Back alignment and structure |
|---|
Score = 43.5 bits (104), Expect = 4e-05
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+D G + + G+ +LLVK+ + N+ F P+H+AA G + LL+
Sbjct: 71 KDKGGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQ 129
Query: 128 VTHGVDIYSG-KDGANVLSFLIAANLY-DVALDLLKRH 163
HG D +DG L + + D+ DLL+
Sbjct: 130 --HGADPTKKNRDGNTPLD--LVKDGDTDIQ-DLLRGD 162
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165 | Back alignment and structure |
|---|
Score = 43.5 bits (104), Expect = 4e-05
Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128
++ +A G++ +K L G P+H AA Y YLL+
Sbjct: 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQ- 63
Query: 129 THGVDI 134
HG D+
Sbjct: 64 -HGADV 68
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165 | Back alignment and structure |
|---|
Score = 40.8 bits (97), Expect = 3e-04
Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128
+ T +A + ++ L+++ D+ + + G +P+H+A YGH + L++
Sbjct: 39 EGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSYGHYEVAELLVK- 96
Query: 129 THGVDI 134
HG +
Sbjct: 97 -HGAVV 101
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 | Back alignment and structure |
|---|
Score = 43.1 bits (103), Expect = 4e-05
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128
D G + L+A G+ ++L++ + R P+H AA GH + LL+
Sbjct: 31 DWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGHANIVEVLLK- 88
Query: 129 THGVDI 134
HG D+
Sbjct: 89 -HGADV 93
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 | Back alignment and structure |
|---|
Score = 43.1 bits (103), Expect = 4e-05
Identities = 13/67 (19%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+ T ++A++G+ +++L+K+ D+ N + +H A + H++ L++
Sbjct: 63 RTKVDRTPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIK 121
Query: 128 VTHGVDI 134
+G D+
Sbjct: 122 --YGADV 126
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 9e-05
Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 27/138 (19%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKY-- 94
+L++A + + E + + G TA ++ N+ ++ L+
Sbjct: 52 AAMVLMEAAPE------------LVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGA 99
Query: 95 ----------NPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANV 143
+ G P+ AA G ++ L+E HG DI + G V
Sbjct: 100 SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE--HGADIRAQDSLGNTV 157
Query: 144 LSFLIAANLYDVALDLLK 161
L LI A +
Sbjct: 158 LHILILQPNKTFACQMYN 175
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 32/109 (29%)
Query: 37 IVELLID--AESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGN----LRALKL 90
IV LLI+ A+ QD+ G+T + + N + L
Sbjct: 136 IVRLLIEHGADIRA-------------------QDSLGNTVLHILILQPNKTFACQMYNL 176
Query: 91 LVKYNPD-----LTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
L+ Y+ L + + +G P A + G+ F +L++ I
Sbjct: 177 LLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQ--KRKHI 223
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 17/110 (15%)
Query: 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGH---KDTFHYL 125
D HG+T + NL +K LVK+ + G + A + TF L
Sbjct: 128 DEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEAL 186
Query: 126 LEVTHGVDI----YSGK-------DGANVLSFLIAANLY-DVALDLLKRH 163
L+ + + + + AA Y D+ + + +
Sbjct: 187 LDY-LYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKK 235
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 20/110 (18%), Positives = 32/110 (29%), Gaps = 10/110 (9%)
Query: 32 TIFHMIVELLIDAESDEAI-----CLLDKLASK--VDPETLARQDNHGHTAATLSAAKGN 84
TI H I+ A L+ + K ++ +
Sbjct: 203 TILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSI 262
Query: 85 LRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI 134
L L L L N + G ++ AA G+ LL+ +G D
Sbjct: 263 LENLDLKWIIANML-NAQDSNGDTCLNIAARLGNISIVDALLD--YGADP 309
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 3e-04
Identities = 21/116 (18%), Positives = 35/116 (30%), Gaps = 21/116 (18%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96
+ LL+ ++ + + A L+A G+L L L + P
Sbjct: 110 TLCLLLTSDEI-----------------VKVIQAENYQAFRLAAENGHLHVLNRLCELAP 152
Query: 97 DLTN-IRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVLSFLIAA 150
+ E + AA GH + L E + N +F AA
Sbjct: 153 TEIMAMIQAENYHAFRLAAENGHLHVLNRLCE--LAPTEATAMIQAENYYAFRWAA 206
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 5e-04
Identities = 26/132 (19%), Positives = 41/132 (31%), Gaps = 25/132 (18%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVK--- 93
+ +L+D + D G TA ++ + ++LLV+
Sbjct: 64 TIPILLDIAEKTGNMREFINSPFRD------VYYRGQTALHIAIERRCKHYVELLVEKGA 117
Query: 94 ----------YNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHG---VDIYS-GKD 139
+ P G LP+ AA HYL E +G D+
Sbjct: 118 DVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE--NGHKQADLRRQDSR 175
Query: 140 GANVLSFLIAAN 151
G VL L+A
Sbjct: 176 GNTVLHALVAIA 187
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 8e-04
Identities = 21/118 (17%), Positives = 38/118 (32%), Gaps = 31/118 (26%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTA---------ATLSAAKGNLRA 87
IV L + +A D RQD+ G+T T K +
Sbjct: 155 IVHYLTENGHKQA-----------DLR---RQDSRGNTVLHALVAIADNTRENTKFVTKM 200
Query: 88 LKLLVKY------NPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKD 139
LL+ + +L + + +G P+ AA G F +++ + +
Sbjct: 201 YDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR--REIADAAAHH 256
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136 | Back alignment and structure |
|---|
Score = 39.3 bits (93), Expect = 7e-04
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
D G T L+A G+L ++L+K+ D+ N + G + G++D L +
Sbjct: 76 VDAIGFTPLHLAAFIGHLEIAEVLLKHGADV-NAQDKFGKTAFDISIGNGNEDLAEILQK 134
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 8e-04
Identities = 18/106 (16%), Positives = 31/106 (29%), Gaps = 29/106 (27%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRA--------- 87
IV+ L+ A D +D+ G+T +
Sbjct: 163 IVKFLLQNSWQPA-----------DIS---ARDSVGNTVLHALVEVADNTVDNTKFVTSM 208
Query: 88 ---LKLLVKY---NPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+ +L L I + +G P+ AA G Y+L+
Sbjct: 209 YNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQ 254
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 624 | |||
| 1n11_A | 437 | Ankyrin; clathrin, BAND 3, anion exchanger, struct | 100.0 | |
| 1n11_A | 437 | Ankyrin; clathrin, BAND 3, anion exchanger, struct | 100.0 | |
| 3utm_A | 351 | Tankyrase-1; tankyrase, TNKS, ankryin repeat clust | 100.0 | |
| 3utm_A | 351 | Tankyrase-1; tankyrase, TNKS, ankryin repeat clust | 100.0 | |
| 1wdy_A | 285 | 2-5A-dependent ribonuclease; hydrolase, RNA-bindin | 100.0 | |
| 1wdy_A | 285 | 2-5A-dependent ribonuclease; hydrolase, RNA-bindin | 100.0 | |
| 2xai_A | 261 | ASB-9, ankyrin repeat and SOCS box protein 9; tran | 100.0 | |
| 4g8k_A | 337 | 2-5A-dependent ribonuclease; ankyrin-repeat domain | 100.0 | |
| 3d9h_A | 285 | CDNA FLJ77766, highly similar to HOMO sapiens anky | 100.0 | |
| 3b7b_A | 237 | Euchromatic histone-lysine N-methyltransferase 1; | 100.0 | |
| 2fo1_E | 373 | LIN-12 protein; beta-barrel, protein-DNA complex, | 100.0 | |
| 1oy3_D | 282 | Transcription factor inhibitor I-kappa-B-beta; pro | 100.0 | |
| 2xai_A | 261 | ASB-9, ankyrin repeat and SOCS box protein 9; tran | 100.0 | |
| 1s70_B | 299 | 130 kDa myosin-binding subunit of smooth muscle my | 100.0 | |
| 3d9h_A | 285 | CDNA FLJ77766, highly similar to HOMO sapiens anky | 100.0 | |
| 4g8k_A | 337 | 2-5A-dependent ribonuclease; ankyrin-repeat domain | 100.0 | |
| 1k1a_A | 241 | B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa | 100.0 | |
| 1yyh_A | 253 | HN1;, notch 1, ankyrin domain; ankyrin repeats, ce | 100.0 | |
| 3ljn_A | 364 | Hypothetical protein; ankyrin, structural genomics | 100.0 | |
| 2dzn_A | 228 | Probable 26S proteasome regulatory subunit P28; an | 100.0 | |
| 1yyh_A | 253 | HN1;, notch 1, ankyrin domain; ankyrin repeats, ce | 100.0 | |
| 1oy3_D | 282 | Transcription factor inhibitor I-kappa-B-beta; pro | 100.0 | |
| 3aji_A | 231 | 26S proteasome non-ATPase regulatory subunit 10; g | 100.0 | |
| 4b93_B | 269 | Ankyrin repeat domain-containing protein 27; endoc | 100.0 | |
| 2fo1_E | 373 | LIN-12 protein; beta-barrel, protein-DNA complex, | 100.0 | |
| 3aji_A | 231 | 26S proteasome non-ATPase regulatory subunit 10; g | 100.0 | |
| 3kea_A | 285 | K1L; tropism, ANK repeat, viral protein; 2.30A {Va | 100.0 | |
| 3eu9_A | 240 | Huntingtin-interacting protein 14; epigenetics, an | 100.0 | |
| 3b7b_A | 237 | Euchromatic histone-lysine N-methyltransferase 1; | 100.0 | |
| 2f8y_A | 223 | Notch homolog 1, translocation-associated (drosoph | 100.0 | |
| 3ljn_A | 364 | Hypothetical protein; ankyrin, structural genomics | 100.0 | |
| 4b93_B | 269 | Ankyrin repeat domain-containing protein 27; endoc | 100.0 | |
| 2dzn_A | 228 | Probable 26S proteasome regulatory subunit P28; an | 100.0 | |
| 1k1a_A | 241 | B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa | 100.0 | |
| 1s70_B | 299 | 130 kDa myosin-binding subunit of smooth muscle my | 100.0 | |
| 1ikn_D | 236 | Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 | 100.0 | |
| 2f8y_A | 223 | Notch homolog 1, translocation-associated (drosoph | 99.98 | |
| 2rfa_A | 232 | Transient receptor potential cation channel subfa | 99.97 | |
| 3eu9_A | 240 | Huntingtin-interacting protein 14; epigenetics, an | 99.97 | |
| 3hra_A | 201 | Ankyrin repeat family protein; structural protein; | 99.97 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 99.97 | |
| 1ikn_D | 236 | Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 | 99.97 | |
| 2rfa_A | 232 | Transient receptor potential cation channel subfa | 99.97 | |
| 3kea_A | 285 | K1L; tropism, ANK repeat, viral protein; 2.30A {Va | 99.97 | |
| 2etb_A | 256 | Transient receptor potential cation channel subfam | 99.96 | |
| 3hra_A | 201 | Ankyrin repeat family protein; structural protein; | 99.96 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 99.96 | |
| 2pnn_A | 273 | Transient receptor potential cation channel subfa | 99.96 | |
| 4gpm_A | 169 | Engineered protein OR264; de novo protein, structu | 99.96 | |
| 2etb_A | 256 | Transient receptor potential cation channel subfam | 99.96 | |
| 4gpm_A | 169 | Engineered protein OR264; de novo protein, structu | 99.96 | |
| 3jxi_A | 260 | Vanilloid receptor-related osmotically activated p | 99.96 | |
| 4hbd_A | 276 | KN motif and ankyrin repeat domain-containing Pro; | 99.96 | |
| 2pnn_A | 273 | Transient receptor potential cation channel subfa | 99.95 | |
| 3v30_A | 172 | DNA-binding protein rfxank; structural genomics co | 99.95 | |
| 2rfm_A | 192 | Putative ankyrin repeat protein TV1425; ANK repeat | 99.94 | |
| 2vge_A | 229 | RELA-associated inhibitor; iaspp, nucleus, apoptos | 99.94 | |
| 3jxi_A | 260 | Vanilloid receptor-related osmotically activated p | 99.94 | |
| 3v30_A | 172 | DNA-binding protein rfxank; structural genomics co | 99.94 | |
| 1ihb_A | 162 | P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit | 99.94 | |
| 2rfm_A | 192 | Putative ankyrin repeat protein TV1425; ANK repeat | 99.94 | |
| 2vge_A | 229 | RELA-associated inhibitor; iaspp, nucleus, apoptos | 99.94 | |
| 3v31_A | 167 | Ankyrin repeat family A protein 2; structural geno | 99.94 | |
| 3v31_A | 167 | Ankyrin repeat family A protein 2; structural geno | 99.94 | |
| 1ihb_A | 162 | P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit | 99.94 | |
| 2y1l_E | 169 | Darpin-8.4; hydrolase-inhibitor complex, DEVD darp | 99.93 | |
| 2y1l_E | 169 | Darpin-8.4; hydrolase-inhibitor complex, DEVD darp | 99.93 | |
| 4hbd_A | 276 | KN motif and ankyrin repeat domain-containing Pro; | 99.93 | |
| 2aja_A | 376 | Ankyrin repeat family protein; NESG, Q5ZSV0, struc | 99.93 | |
| 1bd8_A | 156 | P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr | 99.93 | |
| 3twr_A | 165 | Tankyrase-2; ankyrin repeat, protein-protein inter | 99.93 | |
| 3f6q_A | 179 | Integrin-linked protein kinase; ILK, integrin-link | 99.93 | |
| 2aja_A | 376 | Ankyrin repeat family protein; NESG, Q5ZSV0, struc | 99.93 | |
| 1bd8_A | 156 | P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr | 99.93 | |
| 3f6q_A | 179 | Integrin-linked protein kinase; ILK, integrin-link | 99.92 | |
| 1ycs_B | 239 | 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres | 99.92 | |
| 1awc_B | 153 | Protein (GA binding protein beta 1); complex (tran | 99.92 | |
| 1awc_B | 153 | Protein (GA binding protein beta 1); complex (tran | 99.92 | |
| 3twr_A | 165 | Tankyrase-2; ankyrin repeat, protein-protein inter | 99.92 | |
| 1ycs_B | 239 | 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres | 99.92 | |
| 1d9s_A | 136 | Cyclin-dependent kinase 4 inhibitor B; helix-turn- | 99.91 | |
| 1bi7_B | 156 | P16INK4A, MTS1, multiple tumor suppressor; cyclin | 99.9 | |
| 2jab_A | 136 | H10-2-G3; HER2, darpin, ankyrin repeat protein, me | 99.89 | |
| 1n0r_A | 126 | 4ANK, 4 ankyrin repeats; structural protein; 1.50A | 99.89 | |
| 3t8k_A | 186 | Uncharacterized protein; structural genomics, PSI- | 99.89 | |
| 3t8k_A | 186 | Uncharacterized protein; structural genomics, PSI- | 99.88 | |
| 1d9s_A | 136 | Cyclin-dependent kinase 4 inhibitor B; helix-turn- | 99.87 | |
| 3ui2_A | 244 | Signal recognition particle 43 kDa protein, chlor; | 99.87 | |
| 1bi7_B | 156 | P16INK4A, MTS1, multiple tumor suppressor; cyclin | 99.87 | |
| 3c5r_A | 137 | BARD-1, BRCA1-associated ring domain protein 1; an | 99.86 | |
| 3aaa_C | 123 | Myotrophin, protein V-1; actin capping protein, ba | 99.86 | |
| 3deo_A | 183 | Signal recognition particle 43 kDa protein; chloro | 99.86 | |
| 1n0r_A | 126 | 4ANK, 4 ankyrin repeats; structural protein; 1.50A | 99.84 | |
| 2b0o_E | 301 | UPLC1; arfgap, structural genomics, structural gen | 99.84 | |
| 3deo_A | 183 | Signal recognition particle 43 kDa protein; chloro | 99.84 | |
| 3ehr_A | 222 | Osteoclast-stimulating factor 1; beta barrel, heli | 99.84 | |
| 3ui2_A | 244 | Signal recognition particle 43 kDa protein, chlor; | 99.84 | |
| 3c5r_A | 137 | BARD-1, BRCA1-associated ring domain protein 1; an | 99.83 | |
| 3aaa_C | 123 | Myotrophin, protein V-1; actin capping protein, ba | 99.82 | |
| 2b0o_E | 301 | UPLC1; arfgap, structural genomics, structural gen | 99.82 | |
| 2jab_A | 136 | H10-2-G3; HER2, darpin, ankyrin repeat protein, me | 99.82 | |
| 1n0q_A | 93 | 3ANK, 3 ankyrin repeats; structural protein; 1.26A | 99.81 | |
| 3jue_A | 368 | Arfgap with coiled-coil, ANK repeat and PH domain | 99.8 | |
| 1n0q_A | 93 | 3ANK, 3 ankyrin repeats; structural protein; 1.26A | 99.79 | |
| 3lvq_E | 497 | ARF-GAP with SH3 domain, ANK repeat and PH domain | 99.78 | |
| 1dcq_A | 278 | PYK2-associated protein beta; zinc-binding module, | 99.78 | |
| 1dcq_A | 278 | PYK2-associated protein beta; zinc-binding module, | 99.77 | |
| 3ehr_A | 222 | Osteoclast-stimulating factor 1; beta barrel, heli | 99.77 | |
| 2l6b_A | 115 | NR1C; ankyrin, consensus, repeat protein, ising mo | 99.76 | |
| 2l6b_A | 115 | NR1C; ankyrin, consensus, repeat protein, ising mo | 99.74 | |
| 3lvq_E | 497 | ARF-GAP with SH3 domain, ANK repeat and PH domain | 99.72 | |
| 3jue_A | 368 | Arfgap with coiled-coil, ANK repeat and PH domain | 99.72 | |
| 2zgd_A | 110 | 3 repeat synthetic ankyrin; ankyrin repeat, hydrox | 99.69 | |
| 2zgd_A | 110 | 3 repeat synthetic ankyrin; ankyrin repeat, hydrox | 99.68 |
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=378.31 Aligned_cols=358 Identities=16% Similarity=0.077 Sum_probs=276.1
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|+..|+.+.|+.++++.. .++.+ +..| .||||+||. .| +.++|++|++.+ .+++.+|.+|.||||+||
T Consensus 21 Aa~~g~~~~v~~Ll~~g~-~~~~~-~~~~-~t~L~~A~~----~g---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 88 (437)
T 1n11_A 21 ASFMGHLPIVKNLLQRGA-SPNVS-NVKV-ETPLHMAAR----AG---HTEVAKYLLQNK--AKVNAKAKDDQTPLHCAA 88 (437)
T ss_dssp HHHHTCHHHHHHHHHTTC-CSCCS-SSCC-CCHHHHHHH----HT---CHHHHHHHHHHT--CCSSCCCTTSCCHHHHHH
T ss_pred HHHCCCHHHHHHHHHcCC-CCCCC-CCCC-CCHHHHHHH----cC---CHHHHHHHHhCC--CCCCCCCCCCCCHHHHHH
Confidence 678899999999998743 34455 7889 999999999 99 999999999997 678899999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLL 160 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll 160 (624)
..|+.++|++|++++++ ++.+|..|.||||+|+..|+.+++++|++.+.+... .+..|.||||+|+..|+.+++++|+
T Consensus 89 ~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll 166 (437)
T 1n11_A 89 RIGHTNMVKLLLENNAN-PNLATTAGHTPLHIAAREGHVETVLALLEKEASQAC-MTKKGFTPLHVAAKYGKVRVAELLL 166 (437)
T ss_dssp HHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HCCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcC-CCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999888 778899999999999999999999999999988877 8899999999999999999999999
Q ss_pred HhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcc
Q 006942 161 KRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKE 240 (624)
Q Consensus 161 ~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (624)
+++.+. +..|..|.||||+|+..++ ...++.++.....+. .
T Consensus 167 ~~g~~~-~~~~~~g~t~L~~A~~~~~-------~~~v~~Ll~~g~~~~-------------------------------~ 207 (437)
T 1n11_A 167 ERDAHP-NAAGKNGLTPLHVAVHHNN-------LDIVKLLLPRGGSPH-------------------------------S 207 (437)
T ss_dssp HTTCCT-TCCCSSCCCHHHHHHHTTC-------HHHHHHHGGGTCCSC-------------------------------C
T ss_pred hCCCCC-CCCCCCCCCHHHHHHHcCC-------HHHHHHHHhCCCCCC-------------------------------C
Confidence 987765 6678899999999998753 344444443322110 0
Q ss_pred cccCCCCcchhhhhhhhhHHHHHHhhhccCCCC--------CCccchHhhhhhhhhHHHHHHHHHhhcccccccCCcccc
Q 006942 241 STRFGSTQQITTTFGAMLHKLHRMLWNAXMHLS--------PGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLS 312 (624)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~ 312 (624)
... ...+.++.+....+.+.++.+...+. ......++...++...+++|. +.....+. .+..|.
T Consensus 208 ~~~----~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll---~~~~~~~~-~~~~g~ 279 (437)
T 1n11_A 208 PAW----NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLL---SKQANGNL-GNKSGL 279 (437)
T ss_dssp CCT----TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH---TTTCCTTC-CCTTCC
T ss_pred cCC----CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH---hcCCCCCC-CCCCCC
Confidence 000 11122333333333333333322211 112234555666666655554 33332222 677889
Q ss_pred HHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcC
Q 006942 313 VAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLV 392 (624)
Q Consensus 313 tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~ 392 (624)
||||+|+..|+.++++.|+++ +.++...|..|+||||+|+.+|+.+++++|++.+ ..+|.+|..|+||||+|++.|
T Consensus 280 t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---ad~n~~~~~g~t~L~~A~~~g 355 (437)
T 1n11_A 280 TPLHLVAQEGHVPVADVLIKH-GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ---ADVNAKTKLGYSPLHQAAQQG 355 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHH-TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHhC-CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC---CCCCCCCCCCCCHHHHHHHCC
Confidence 999999999999999999999 8888767999999999999999999999999998 667799999999999999999
Q ss_pred CCCCccchHHHhHHHHhHHHHHHhhcC-cccccccCCCCCChhhhhhHH
Q 006942 393 PSSEVAGAALQMQRELQWFKAIENLVH-PFFREATNDLKQTPREVFTEE 440 (624)
Q Consensus 393 ~~~~~~gaalq~~~~l~~~~~v~~~~~-~~~~~~~N~~G~Tp~dl~~~~ 440 (624)
+.+ .|+.++. ....+.+|.+|+||++++.+.
T Consensus 356 ~~~-----------------iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 356 HTD-----------------IVTLLLKNGASPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp CHH-----------------HHHHHHHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred hHH-----------------HHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 843 1222222 235788999999999998654
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=361.31 Aligned_cols=339 Identities=15% Similarity=0.117 Sum_probs=262.0
Q ss_pred ccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCc
Q 006942 20 ALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLT 99 (624)
Q Consensus 20 ~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~ 99 (624)
.++.. +.+| .||||+||. .| +.++|++|++.+ .+++..|..|.||||+||..|+.++|++|++++++ +
T Consensus 6 ~~~~~-~~~g-~t~L~~Aa~----~g---~~~~v~~Ll~~g--~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~ 73 (437)
T 1n11_A 6 SGGGG-GESG-LTPLHVASF----MG---HLPIVKNLLQRG--ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK-V 73 (437)
T ss_dssp -----------CCHHHHHHH----HT---CHHHHHHHHHTT--CCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC-S
T ss_pred Ccccc-CCCC-CCHHHHHHH----CC---CHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-C
Confidence 44455 8899 999999999 99 999999999997 67788999999999999999999999999999988 7
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHH
Q 006942 100 NIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILN 179 (624)
Q Consensus 100 ~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh 179 (624)
+.+|..|.||||+|+..|+.+++++|++++++.+. .+..|.||||+|+..|+.++++.|++.+.+. ...+..|.||||
T Consensus 74 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~ 151 (437)
T 1n11_A 74 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNL-ATTAGHTPLHIAAREGHVETVLALLEKEASQ-ACMTKKGFTPLH 151 (437)
T ss_dssp SCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHH
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-cCCCCCCCCHHH
Confidence 88999999999999999999999999999999888 8999999999999999999999999987765 556888999999
Q ss_pred HHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhH
Q 006942 180 TLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLH 259 (624)
Q Consensus 180 ~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (624)
+|+..++ ...++.++.....+ .... ....+.++.++..
T Consensus 152 ~A~~~g~-------~~~v~~Ll~~g~~~-------------------------------~~~~----~~g~t~L~~A~~~ 189 (437)
T 1n11_A 152 VAAKYGK-------VRVAELLLERDAHP-------------------------------NAAG----KNGLTPLHVAVHH 189 (437)
T ss_dssp HHHHTTC-------HHHHHHHHHTTCCT-------------------------------TCCC----SSCCCHHHHHHHT
T ss_pred HHHHcCC-------HHHHHHHHhCCCCC-------------------------------CCCC----CCCCCHHHHHHHc
Confidence 9998853 45555554433211 0000 1112334444444
Q ss_pred HHHHHhhhccCCCCC--------CccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHH
Q 006942 260 KLHRMLWNAXMHLSP--------GIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFI 331 (624)
Q Consensus 260 ~~~~~~~~~~~~~~~--------~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll 331 (624)
.+.+.++.+...+.. .....++...++...++.|........ ..+..|.||||+|+..|+.+++++|+
T Consensus 190 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll 265 (437)
T 1n11_A 190 NNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN----AESVQGVTPLHLAAQEGHAEMVALLL 265 (437)
T ss_dssp TCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----CCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 445555444433211 122345556666666665554333222 36778899999999999999999999
Q ss_pred HccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHHhHH
Q 006942 332 MAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQWF 411 (624)
Q Consensus 332 ~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~~ 411 (624)
++ +++....|..|+||||+|+..|+.+++++|++.+ ..+|.+|..|+||||+|+..|+.++
T Consensus 266 ~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~g~~~~--------------- 326 (437)
T 1n11_A 266 SK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG---VMVDATTRMGYTPLHVASHYGNIKL--------------- 326 (437)
T ss_dssp TT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT---CCTTCCCSSCCCHHHHHHHSSCSHH---------------
T ss_pred hc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC---ccCCCCCCCCCCHHHHHHHcCcHHH---------------
Confidence 99 8888766999999999999999999999999988 5677999999999999999998641
Q ss_pred HHHHhhcC-cccccccCCCCCChhhhhhH
Q 006942 412 KAIENLVH-PFFREATNDLKQTPREVFTE 439 (624)
Q Consensus 412 ~~v~~~~~-~~~~~~~N~~G~Tp~dl~~~ 439 (624)
|+.++. ...++.+|..|.||++++..
T Consensus 327 --v~~Ll~~gad~n~~~~~g~t~L~~A~~ 353 (437)
T 1n11_A 327 --VKFLLQHQADVNAKTKLGYSPLHQAAQ 353 (437)
T ss_dssp --HHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred --HHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 222222 23578899999999999765
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=327.47 Aligned_cols=270 Identities=14% Similarity=0.091 Sum_probs=178.4
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
||..|+.+.++.++.+.+..++.+ +..| +||||+||. .| +.++|++|++.+ .+++.+|..|.||||+|+
T Consensus 31 A~~~g~~~~v~~ll~~~~~~~~~~-d~~g-~t~L~~A~~----~g---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 99 (351)
T 3utm_A 31 AARSGNEEKLMALLTPLNVNCHAS-DGRK-STPLHLAAG----YN---RVRIVQLLLQHG--ADVHAKDKGGLVPLHNAC 99 (351)
T ss_dssp HHHHTCHHHHHHHCCTTTTTCCCS-STTC-CCHHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHhcCCCcccC-CCCC-CCHHHHHHH----cC---CHHHHHHHHHcC--CCCCccCCCCCcHHHHHH
Confidence 355566666666666555555444 5566 666666666 66 666666666664 455566666666666666
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH------------
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLI------------ 148 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~------------ 148 (624)
..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++++++... .+..|.||+|.|+
T Consensus 100 ~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~~~l~~a~~~~~~~~~~~~~ 177 (351)
T 3utm_A 100 SYGHYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTL-VNCHGKSAVDMAPTPELRERLTYEF 177 (351)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCSSHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc-ccCCCCcchHHHhhhhhHHHHHhhh
Confidence 66666666666666555 555566666666666666666666666666666555 5666666655443
Q ss_pred ---------HhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCC
Q 006942 149 ---------AANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTND 219 (624)
Q Consensus 149 ---------~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~ 219 (624)
..+..+.+..++.... .....+..|.||||+|+..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~t~L~~A~~~~---------------------------------- 222 (351)
T 3utm_A 178 KGHSLLQAAREADLAKVKKTLALEI-INFKQPQSHETALHCAVASL---------------------------------- 222 (351)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTTTCC-TTCCCTTTCCCHHHHHHHCC----------------------------------
T ss_pred cccHHHHHHHhccHHHHHHHHHhhc-ccccCCCCCCCHHHHHHHHh----------------------------------
Confidence 2333333444433322 12234455666666666442
Q ss_pred CCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhh
Q 006942 220 YHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEG 299 (624)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~ 299 (624)
+....++++.+.+.
T Consensus 223 ------------------------------------------------------------------~~~~~~~~~~Ll~~ 236 (351)
T 3utm_A 223 ------------------------------------------------------------------HPKRKQVAELLLRK 236 (351)
T ss_dssp ------------------------------------------------------------------STTHHHHHHHHHHT
T ss_pred ------------------------------------------------------------------CccHHHHHHHHHHc
Confidence 11123334444443
Q ss_pred cccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccC
Q 006942 300 VVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDK 379 (624)
Q Consensus 300 ~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~ 379 (624)
....+ ..+..|.||||+|+..|+.++++.|+++ +.++...|..|+||||+|+.+|+.+++++|++.| ..++.+|.
T Consensus 237 g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g---ad~~~~~~ 311 (351)
T 3utm_A 237 GANVN-EKNKDFMTPLHVAAERAHNDVMEVLHKH-GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYG---SDPSIISL 311 (351)
T ss_dssp TCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCT
T ss_pred CCCcC-CcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC---CCCCCcCC
Confidence 33222 2677899999999999999999999999 9988877999999999999999999999999998 55679999
Q ss_pred CCCchhhhhh
Q 006942 380 AGNNILHLAG 389 (624)
Q Consensus 380 ~GnTpLHlAa 389 (624)
+|+||||+|.
T Consensus 312 ~g~tal~~a~ 321 (351)
T 3utm_A 312 QGFTAAQMGN 321 (351)
T ss_dssp TSCCHHHHSC
T ss_pred CCCChhhhhh
Confidence 9999999994
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-39 Score=331.77 Aligned_cols=306 Identities=16% Similarity=0.110 Sum_probs=242.8
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
+..| .|+||.||+ .| +.+.|+.|+... +.+++.+|..|.||||+||..|+.++|++|++++++ ++.+|..
T Consensus 21 ~~~~-~~~L~~A~~----~g---~~~~v~~ll~~~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~ 90 (351)
T 3utm_A 21 GEYK-KDELLEAAR----SG---NEEKLMALLTPL-NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-VHAKDKG 90 (351)
T ss_dssp HHHH-HHHHHHHHH----HT---CHHHHHHHCCTT-TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred cccc-chhHHHHHH----cC---CHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCC
Confidence 5678 999999999 99 999999999874 577899999999999999999999999999999988 8889999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCC
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKP 185 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~ 185 (624)
|.||||+|+..|+.+++++|++++++.+. .+..|.||||+|+..|+.+++++|++.+.+. ...+..|.||+|+++..+
T Consensus 91 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~~~l~~a~~~~ 168 (351)
T 3utm_A 91 GLVPLHNACSYGHYEVTELLLKHGACVNA-MDLWQFTPLHEAASKNRVEVCSLLLSHGADP-TLVNCHGKSAVDMAPTPE 168 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCSSHH
T ss_pred CCcHHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCcchHHHhhhh
Confidence 99999999999999999999999999888 8999999999999999999999999998765 667899999999987542
Q ss_pred CCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHh
Q 006942 186 YAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRML 265 (624)
Q Consensus 186 ~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (624)
..+.+.+... ...
T Consensus 169 ----------~~~~~~~~~~--------------------------------------------~~~------------- 181 (351)
T 3utm_A 169 ----------LRERLTYEFK--------------------------------------------GHS------------- 181 (351)
T ss_dssp ----------HHHHHHHHHH--------------------------------------------HHH-------------
T ss_pred ----------hHHHHHhhhc--------------------------------------------ccH-------------
Confidence 1111000000 000
Q ss_pred hhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHc---CCHHHHHHHHHccCCCceecC
Q 006942 266 WNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAIL---GIPEVVNEFIMAYDSSSNWSN 342 (624)
Q Consensus 266 ~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~d~~~~d 342 (624)
.......++. ..+..+..... .....+..|.||||+|+.. ++.++++.|++. +.++...|
T Consensus 182 ------------~~~~~~~~~~---~~~~~~l~~~~-~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~-g~~~~~~~ 244 (351)
T 3utm_A 182 ------------LLQAAREADL---AKVKKTLALEI-INFKQPQSHETALHCAVASLHPKRKQVAELLLRK-GANVNEKN 244 (351)
T ss_dssp ------------HHHHHHTTCH---HHHHHHTTTCC-TTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHT-TCCTTCCC
T ss_pred ------------HHHHHHhccH---HHHHHHHHhhc-ccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHc-CCCcCCcC
Confidence 0000111111 11111111111 1233667889999999999 668999999999 98888779
Q ss_pred CCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcC-cc
Q 006942 343 QDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVH-PF 421 (624)
Q Consensus 343 ~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~-~~ 421 (624)
..|+||||+|+.+|+.+++++|++.+ ..+|.+|..|+||||+|+..|+.+ .|+.++. ..
T Consensus 245 ~~g~t~L~~A~~~g~~~~v~~Ll~~g---a~~n~~d~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~ga 304 (351)
T 3utm_A 245 KDFMTPLHVAAERAHNDVMEVLHKHG---AKMNALDSLGQTALHRAALAGHLQ-----------------TCRLLLSYGS 304 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHH-----------------HHHHHHHTTC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHHcCcHH-----------------HHHHHHHcCC
Confidence 99999999999999999999999998 667799999999999999999853 1222222 23
Q ss_pred cccccCCCCCChhhhhhHHHHHhHHH
Q 006942 422 FREATNDLKQTPREVFTEEHKELVKE 447 (624)
Q Consensus 422 ~~~~~N~~G~Tp~dl~~~~~~~l~~~ 447 (624)
..+.+|.+|+||++++.+...++..+
T Consensus 305 d~~~~~~~g~tal~~a~~~~~~~l~~ 330 (351)
T 3utm_A 305 DPSIISLQGFTAAQMGNEAVQQILSE 330 (351)
T ss_dssp CTTCCCTTSCCHHHHSCHHHHHHHHH
T ss_pred CCCCcCCCCCChhhhhhHHHHHHHHh
Confidence 57889999999999987766665544
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=310.98 Aligned_cols=262 Identities=18% Similarity=0.158 Sum_probs=180.9
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|+..|+.+.++.++++.+.. +...+..| .||||+|+. .| +.+++++|++.+ .+++.+|.+|.||||+|+
T Consensus 12 A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g-~t~L~~A~~----~g---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 80 (285)
T 1wdy_A 12 AVQNEDVDLVQQLLEGGANV-NFQEEEGG-WTPLHNAVQ----MS---REDIVELLLRHG--ADPVLRKKNGATPFLLAA 80 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCCTTTC-CCHHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCc-ccccCCCC-CcHHHHHHH----cC---CHHHHHHHHHcC--CCCcccCCCCCCHHHHHH
Confidence 56677888888777775543 22225667 788888888 88 888888888776 566777777888888888
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCcccc----------CCCCCcHHHHHHHh
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYS----------GKDGANVLSFLIAA 150 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~----------~~~G~t~Lh~A~~~ 150 (624)
..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++.+.+.+. . +..|.||||.|+..
T Consensus 81 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T 1wdy_A 81 IAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNL-RRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCccc-ccccHHHHHhhccCCCcHHHHHHHc
Confidence 88888888888887776 667777788888888888888888888887776655 3 66777888888888
Q ss_pred CcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhh
Q 006942 151 NLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESF 230 (624)
Q Consensus 151 ~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (624)
|+.++++.|++..+...+..|..|.||||+|+..+...
T Consensus 159 ~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~------------------------------------------ 196 (285)
T 1wdy_A 159 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS------------------------------------------ 196 (285)
T ss_dssp TCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTT------------------------------------------
T ss_pred CCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccc------------------------------------------
Confidence 88888888887744445667777888888877653200
Q ss_pred hhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCcc
Q 006942 231 IVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQ 310 (624)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~ 310 (624)
...++++.+.+.....+ ..+..
T Consensus 197 ---------------------------------------------------------~~~~i~~~Ll~~g~~~~-~~~~~ 218 (285)
T 1wdy_A 197 ---------------------------------------------------------DVEAITHLLLDHGADVN-VRGER 218 (285)
T ss_dssp ---------------------------------------------------------THHHHHHHHHHTTCCSS-CCCTT
T ss_pred ---------------------------------------------------------hHHHHHHHHHHcCCCCC-CcCCC
Confidence 01122222222222112 25566
Q ss_pred ccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCcccccccccc
Q 006942 311 LSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRD 378 (624)
Q Consensus 311 g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D 378 (624)
|.||||+|+..|+.++++.|++..+.++...|..|+||||+|+.+++.+++++|+++| ..++.+|
T Consensus 219 g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~G---a~~~~~d 283 (285)
T 1wdy_A 219 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG---ASTDCGD 283 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS---SCSCCSS
T ss_pred CCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcC---CCCCccc
Confidence 7788888888888888888887315555544778888888888888888888888777 3344554
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=310.53 Aligned_cols=248 Identities=17% Similarity=0.120 Sum_probs=215.1
Q ss_pred CCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccC-CCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCC
Q 006942 28 PGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQ-DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEG 106 (624)
Q Consensus 28 ~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~-d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G 106 (624)
+| .||||.|++ .| +.++|+.|++.+ .+++.+ +..|.||||+|+..|+.+++++|++++++ ++.+|..|
T Consensus 4 ~g-~~~L~~A~~----~g---~~~~v~~Ll~~g--~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g 72 (285)
T 1wdy_A 4 ED-NHLLIKAVQ----NE---DVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNG 72 (285)
T ss_dssp HH-HHHHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTC
T ss_pred cc-chHHHHHHH----cC---CHHHHHHHHHcC--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCC
Confidence 56 999999999 99 999999999997 566666 88899999999999999999999999888 77899999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCccc---------CCCCCCH
Q 006942 107 FLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDS---------IDSRRII 177 (624)
Q Consensus 107 ~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~---------d~~G~Tp 177 (624)
.||||+|+..|+.+++++|++++.+.+. .+..|.||||+|+..|+.+++++|++.+.+..... +..|.||
T Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~ 151 (285)
T 1wdy_A 73 ATPFLLAAIAGSVKLLKLFLSKGADVNE-CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATA 151 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcH
Confidence 9999999999999999999999999888 89999999999999999999999999987764332 7789999
Q ss_pred HHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhh
Q 006942 178 LNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAM 257 (624)
Q Consensus 178 Lh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (624)
||+|+..++
T Consensus 152 L~~A~~~~~----------------------------------------------------------------------- 160 (285)
T 1wdy_A 152 LMDAAEKGH----------------------------------------------------------------------- 160 (285)
T ss_dssp HHHHHHHTC-----------------------------------------------------------------------
T ss_pred HHHHHHcCC-----------------------------------------------------------------------
Confidence 999997642
Q ss_pred hHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhh-cccccccCCccccHHHHHHHHcCC----HHHHHHHHH
Q 006942 258 LHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEG-VVWTNFQNSAQLSVAMLAAAILGI----PEVVNEFIM 332 (624)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~-~~~~~~~~~~~g~tpLh~Aa~~g~----~~iv~~Ll~ 332 (624)
.++++.+.+. ... ....+..|.||||.|+..|+ .++++.|++
T Consensus 161 --------------------------------~~~v~~Ll~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~ 207 (285)
T 1wdy_A 161 --------------------------------VEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLD 207 (285)
T ss_dssp --------------------------------HHHHHHHHHTSCCC-TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHH
T ss_pred --------------------------------HHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHccccchHHHHHHHHHH
Confidence 1122222222 111 11267789999999999999 999999999
Q ss_pred ccCCCceecCCCCCcHHHHHHHcCChhHHHHHhc-CCccccccccccCCCCchhhhhhhcCCCC
Q 006942 333 AYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQG-VNFTTFLFSSRDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 333 ~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~-~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 395 (624)
. +.++...|..|+||||+|+.+|+.+++++|++ .+ ..+|.+|.+|+||||+|++.++.+
T Consensus 208 ~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g---~~~~~~~~~g~t~l~~A~~~~~~~ 267 (285)
T 1wdy_A 208 H-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH---IEINDTDSDGKTALLLAVELKLKK 267 (285)
T ss_dssp T-TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSS---CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred c-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccC---CCccccCCCCCcHHHHHHHcCcHH
Confidence 9 98888679999999999999999999999998 55 457799999999999999999853
|
| >4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=314.63 Aligned_cols=275 Identities=18% Similarity=0.152 Sum_probs=181.5
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
||++||.+.|+.||+.+. +++.+-+..| +||||+||. .| +.++|++|++++ ++++.++..+.+|+|.++
T Consensus 32 Av~~g~~~~V~~LL~~Ga-dvn~~~~~~g-~TpLh~A~~----~g---~~~iv~~Ll~~g--a~~~~~~~~~~~~~~~~~ 100 (337)
T 4g8k_A 32 AVQNEDVDLVQQLLEGGA-NVNFQEEEGG-WTPLHNAVQ----MS---REDIVELLLRHG--ADPVLRKKNGATPFILAA 100 (337)
T ss_dssp HHHTTCHHHHHHHHHHTC-CTTCCCTTTC-CCHHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCC-CCCccCCCCC-cCHHHHHHH----cC---CHHHHHHHHHcC--CchhhhccCCCchhHHHH
Confidence 456666666666666532 2333312345 666666666 66 666666666665 455666666666666666
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccc---------cCCCCCcHHHHHHHhC
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIY---------SGKDGANVLSFLIAAN 151 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~---------~~~~G~t~Lh~A~~~~ 151 (624)
..++.++++.+++.+++ ++.+|..|.||||+|+..|+.+++++|++.+++.+.. .+..|.||||+|+..|
T Consensus 101 ~~~~~~~~~~~~~~~~~-~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g 179 (337)
T 4g8k_A 101 IAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 179 (337)
T ss_dssp HHTCHHHHHHHHTTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHT
T ss_pred hcccchhhHHhhhccch-hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCC
Confidence 66666666666666665 5566666777777777777777777777666554431 3445667777777777
Q ss_pred cHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhh
Q 006942 152 LYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFI 231 (624)
Q Consensus 152 ~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (624)
+.++++.|+++.+...+.+|..|.||+|.++....
T Consensus 180 ~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~--------------------------------------------- 214 (337)
T 4g8k_A 180 HVEVLKILLDEMGADVNACDNMGRNALIHALLSSD--------------------------------------------- 214 (337)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSC---------------------------------------------
T ss_pred CHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcC---------------------------------------------
Confidence 77777777655443445566667777666553210
Q ss_pred hhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccc
Q 006942 232 VTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQL 311 (624)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g 311 (624)
......+++.+.+...+.+ ..+..|
T Consensus 215 ------------------------------------------------------~~~~~~i~~lLl~~gad~n-~~d~~g 239 (337)
T 4g8k_A 215 ------------------------------------------------------DSDVEAITHLLLDHGADVN-VRGERG 239 (337)
T ss_dssp ------------------------------------------------------TTTHHHHHHHHHHTTCCTT-CCCGGG
T ss_pred ------------------------------------------------------cccHHHHHHHHHHCCCCCC-CcCCCC
Confidence 0001112222333332222 267889
Q ss_pred cHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhc
Q 006942 312 SVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRL 391 (624)
Q Consensus 312 ~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~ 391 (624)
.||||+|+..|+.++++.|++..+.++...|.+|+||||+|+++|+.+++++|+++| ..+| +.||||+|++.
T Consensus 240 ~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G---Ad~n-----~~~~L~~A~~~ 311 (337)
T 4g8k_A 240 KTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG---ASTD-----CGDLVMTARRN 311 (337)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS---CSST-----TCCHHHHHHHT
T ss_pred CCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCC-----CCCHHHHHHHc
Confidence 999999999999999999998624455544999999999999999999999999998 3333 45699999999
Q ss_pred CCCC
Q 006942 392 VPSS 395 (624)
Q Consensus 392 ~~~~ 395 (624)
|+.+
T Consensus 312 ~~~~ 315 (337)
T 4g8k_A 312 YDHS 315 (337)
T ss_dssp TCHH
T ss_pred CCHH
Confidence 9854
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=310.85 Aligned_cols=245 Identities=14% Similarity=0.080 Sum_probs=187.2
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccC---------chhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVD---------PETLARQDNHGHTAATLSAAKGNLRALKLLVKYNP 96 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~---------~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~ 96 (624)
...| .|+||+|+. .| +.+.+..++..+. ...++.+|.+|.||||+||..|+.++++.|++.++
T Consensus 12 ~~~~-~~~lH~Aa~----~g---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~ 83 (285)
T 3d9h_A 12 SGLV-PRGSHMASM----DG---KQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW 83 (285)
T ss_dssp --------------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred chHH-HHHHHHHhh----cC---CCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 5678 999999999 99 9777777665431 13367789999999999999999999999999998
Q ss_pred CCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCC
Q 006942 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRI 176 (624)
Q Consensus 97 ~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~T 176 (624)
+ ++.+|.+|.||||+|+..|+.+++++|++.+++.+. ++.+|.||||+|+..|+.++++.|++.+.+.. .+.+|.|
T Consensus 84 ~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t 159 (285)
T 3d9h_A 84 A-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLAS 159 (285)
T ss_dssp C-SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTSC
T ss_pred C-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC--CCCCCCC
Confidence 8 788999999999999999999999999999999888 89999999999999999999999999987753 3456999
Q ss_pred HHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhh
Q 006942 177 ILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGA 256 (624)
Q Consensus 177 pLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (624)
|||+|+..++
T Consensus 160 ~L~~A~~~g~---------------------------------------------------------------------- 169 (285)
T 3d9h_A 160 PIHEAARRGH---------------------------------------------------------------------- 169 (285)
T ss_dssp HHHHHHHHTC----------------------------------------------------------------------
T ss_pred HHHHHHHcCC----------------------------------------------------------------------
Confidence 9999997642
Q ss_pred hhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCC
Q 006942 257 MLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDS 336 (624)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 336 (624)
...+++| .+.....+ ..+..|.||||+|+..|+.++++.|++. ++
T Consensus 170 ------------------------------~~~v~~L---l~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga 214 (285)
T 3d9h_A 170 ------------------------------VECVNSL---IAYGGNID-HKISHLGTPLYLACENQQRACVKKLLES-GA 214 (285)
T ss_dssp ------------------------------HHHHHHH---HHTTCCTT-CCBTTTBCHHHHHHHTTCHHHHHHHHHT-TC
T ss_pred ------------------------------HHHHHHH---HHCCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHC-CC
Confidence 1122222 22222112 3677899999999999999999999999 88
Q ss_pred CceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhc
Q 006942 337 SSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRL 391 (624)
Q Consensus 337 d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~ 391 (624)
+.. .|..|+||||+|+.+++.+++++|++.+ ..++.+|.+|+||||+|+..
T Consensus 215 ~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 215 DVN-QGKGQDSPLHAVVRTASEELACLLMDFG---ADTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp CTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCGGGGSCTT
T ss_pred CCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHhcCc
Confidence 876 4889999999999999999999999998 56779999999999999943
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=294.78 Aligned_cols=215 Identities=19% Similarity=0.177 Sum_probs=190.0
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
+.+| .||||+||. .| +.+++++|++.+ .+++..|..|.||||+|+..|+.+++++|++++.+ ++.+|..
T Consensus 8 ~~~g-~t~L~~A~~----~g---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 76 (237)
T 3b7b_A 8 HQNK-RSPLHAAAE----AG---HVDICHMLVQAG--ANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-VDPKDAE 76 (237)
T ss_dssp SCCS-CCHHHHHHH----HT---CHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-CCCCCTT
T ss_pred cCCC-CCHHHHHHH----cC---cHHHHHHHHHcC--CCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCC
Confidence 7788 999999999 99 999999999987 67788899999999999999999999999999887 7788899
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhc-CCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVT-HGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~-~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
|.||||+|+..|+.+++++|++.+ .+.+. .+..|.||||+|+..++.++++.|++.+.++ +.
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~--------------- 139 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQMDVNC-QDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NI--------------- 139 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TC---------------
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-Cc---------------
Confidence 999999999999999999999998 45555 7889999999999999999999999876543 11
Q ss_pred CCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHH
Q 006942 185 PYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRM 264 (624)
Q Consensus 185 ~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (624)
T Consensus 140 -------------------------------------------------------------------------------- 139 (237)
T 3b7b_A 140 -------------------------------------------------------------------------------- 139 (237)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCC
Q 006942 265 LWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQD 344 (624)
Q Consensus 265 ~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~ 344 (624)
.+..|.||||+|+..|+.++++.|++. ++++...|..
T Consensus 140 ------------------------------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~ 176 (237)
T 3b7b_A 140 ------------------------------------------RDNEENICLHWAAFSGCVDIAEILLAA-KCDLHAVNIH 176 (237)
T ss_dssp ------------------------------------------CCTTSCCHHHHHHHHCCHHHHHHHHTT-TCCTTCCCTT
T ss_pred ------------------------------------------cCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCC
Confidence 345567888888899999999999999 9988877999
Q ss_pred CCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCC
Q 006942 345 GHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPS 394 (624)
Q Consensus 345 G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 394 (624)
|+||||+|+.+++.+++++|++.+ ..++.+|.+|+||||+|+..++.
T Consensus 177 g~t~L~~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~t~l~~A~~~~~~ 223 (237)
T 3b7b_A 177 GDSPLHIAARENRYDCVVLFLSRD---SDVTLKNKEGETPLQCASLNSQV 223 (237)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTT---CCTTCCCTTSCCHHHHSCTTCHH
T ss_pred CCCHHHHHHHhCCHhHHHHHHHcC---CCCCccCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999998 55779999999999999998864
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=325.42 Aligned_cols=254 Identities=14% Similarity=0.084 Sum_probs=205.8
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCC-CCCChHHHHHHHcCCHHHHHHHH--------hcCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQD-NHGHTAATLSAAKGNLRALKLLV--------KYNP 96 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d-~~G~TpLh~Aa~~g~~~iv~~Ll--------~~~~ 96 (624)
+..| .||||.||. .| + ++++.|++ .+++.+| ..|.||||+||..|+.++++.|+ +.+.
T Consensus 91 ~~~g-~t~L~~Aa~----~~---~-~~~~~L~~----~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga 157 (373)
T 2fo1_E 91 EPES-PIKLHTEAA----GS---Y-AITEPITR----ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGA 157 (373)
T ss_dssp ---C-CCHHHHHHH----SS---S-CCCSCCST----TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCC
T ss_pred CCCC-ccHHHHHhc----CC---c-hHHHHhcc----ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCC
Confidence 7789 999999999 77 6 67777654 4677888 79999999999999998888776 6677
Q ss_pred CCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCC--CCCcccCCCC
Q 006942 97 DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHP--TIGRDSIDSR 174 (624)
Q Consensus 97 ~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~--~l~~~~d~~G 174 (624)
+ ++.+|..|.||||+|+..|+.++|++|++.+++.+. .+..|.||||+|+..|+.++++.|++... ...+..|.+|
T Consensus 158 ~-vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g 235 (373)
T 2fo1_E 158 D-VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTI-YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNG 235 (373)
T ss_dssp C-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTS
T ss_pred C-CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcc-cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCC
Confidence 7 789999999999999999999999999999999988 89999999999999999999999998752 2346678999
Q ss_pred CCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhh
Q 006942 175 RIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTF 254 (624)
Q Consensus 175 ~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (624)
.||||+|+..+.. ..+..
T Consensus 236 ~t~L~~A~~~~~~----~~~~~---------------------------------------------------------- 253 (373)
T 2fo1_E 236 MTALMIVAHNEGR----DQVAS---------------------------------------------------------- 253 (373)
T ss_dssp CCHHHHHHHSCST----THHHH----------------------------------------------------------
T ss_pred CCHHHHHHHhCCc----chHHH----------------------------------------------------------
Confidence 9999999976310 01112
Q ss_pred hhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhccc----ccccCCccccHHHHHHHHcCCHHHHHHH
Q 006942 255 GAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVW----TNFQNSAQLSVAMLAAAILGIPEVVNEF 330 (624)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~----~~~~~~~~g~tpLh~Aa~~g~~~iv~~L 330 (624)
+++|.....+... .....+..|.||||+|+..|+.++|++|
T Consensus 254 -----------------------------------v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 298 (373)
T 2fo1_E 254 -----------------------------------AKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYL 298 (373)
T ss_dssp -----------------------------------HHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHH
T ss_pred -----------------------------------HHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHH
Confidence 2222211111110 0012566899999999999999999999
Q ss_pred HHccC-CCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCC
Q 006942 331 IMAYD-SSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 331 l~~~~-~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 395 (624)
++. + .++...|..|+||||+|+.+|+.+++++|++.+ ..+|.+|..|+||||+|+..|+.+
T Consensus 299 l~~-~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g---ad~~~~d~~g~t~l~~A~~~g~~~ 360 (373)
T 2fo1_E 299 VGE-KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG---ASVEAVDATDHTARQLAQANNHHN 360 (373)
T ss_dssp HHH-SCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCSSCCCSSSCCHHHHHHHTTCHH
T ss_pred HHh-cCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCccCCCCCCCCHHHHHHHcCCHH
Confidence 998 7 455444999999999999999999999999998 667799999999999999999853
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-37 Score=306.48 Aligned_cols=254 Identities=15% Similarity=0.026 Sum_probs=178.1
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCch-hhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPE-TLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHG 104 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~-~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~ 104 (624)
|.+| +||||+||. .| +.++|++|++.+... .++.+|..|.||||+||..|+.++|++|++++++ ++.+|.
T Consensus 6 d~~g-~t~L~~A~~----~g---~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~ 76 (282)
T 1oy3_D 6 TEDG-DTALHLAVI----HQ---HEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VLVAER 76 (282)
T ss_dssp CTTC-CCHHHHHHH----TT---CHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCT
T ss_pred CCCC-CcHHHHHHH----cC---CHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCC
Confidence 8899 999999999 99 999999999987332 3889999999999999999999999999999998 788999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCccc------------cCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCC
Q 006942 105 EGFLPVHDAALYGHKDTFHYLLEVTHGVDIY------------SGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSID 172 (624)
Q Consensus 105 ~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~------------~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~ 172 (624)
.|.||||+|+..|+.+++++|++.++..... ....+.++++.+...+.......++.......+.+|.
T Consensus 77 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
T 1oy3_D 77 GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY 156 (282)
T ss_dssp TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCT
T ss_pred CCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCC
Confidence 9999999999999999999999988663321 3345667777777666555444444433444567788
Q ss_pred CCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhh
Q 006942 173 SRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITT 252 (624)
Q Consensus 173 ~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (624)
.|.||||+|+..++
T Consensus 157 ~g~t~L~~A~~~g~------------------------------------------------------------------ 170 (282)
T 1oy3_D 157 DGHTPLHVAVIHKD------------------------------------------------------------------ 170 (282)
T ss_dssp TSCCHHHHHHHTTC------------------------------------------------------------------
T ss_pred CCcCHHHHHHHcCC------------------------------------------------------------------
Confidence 99999999997742
Q ss_pred hhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHH
Q 006942 253 TFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIM 332 (624)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~ 332 (624)
...+++|. +.......+.+..|.||||+|+..|+.++|++|++
T Consensus 171 ----------------------------------~~~v~~Ll---~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 213 (282)
T 1oy3_D 171 ----------------------------------AEMVRLLR---DAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLK 213 (282)
T ss_dssp ----------------------------------HHHHHHHH---HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------------------------------HHHHHHHH---HcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHH
Confidence 11233332 22221123233459999999999999999999999
Q ss_pred ccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCC
Q 006942 333 AYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 333 ~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 395 (624)
+ ++++...|..|+||||+|+.+++.+++++|+++| ..++.+|.+|.|||++|....+.+
T Consensus 214 ~-gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~tpl~~a~~~~~~~ 272 (282)
T 1oy3_D 214 A-GADPTARMYGGRTPLGSALLRPNPILARLLRAHG---APEPEDGGDKLSPCSSSGSDSDSD 272 (282)
T ss_dssp T-TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTT---CCCCCCC-----------------
T ss_pred c-CCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcC---CCcCcCCCcccccccccCCccccc
Confidence 9 9998877999999999999999999999999999 667799999999999999876543
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=311.91 Aligned_cols=263 Identities=17% Similarity=0.198 Sum_probs=214.2
Q ss_pred ccCCCHHHHHHHHHcCccc-------cccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCCh
Q 006942 2 IEKNDWQGVEDFVTNHPDA-------LTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHT 74 (624)
Q Consensus 2 a~~G~~~~v~~ll~~~~~~-------~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~T 74 (624)
+.+|..+.++.++...... ....++.+| .||||.||. .| +.++|+.|++.+ .+++..|.+|.|
T Consensus 6 a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~l~~A~~----~g---~~~~v~~Ll~~g--~~~~~~~~~g~t 75 (299)
T 1s70_B 6 AKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDD-GAVFLAACS----SG---DTEEVLRLLERG--ADINYANVDGLT 75 (299)
T ss_dssp HHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECH-HHHHHHHHH----HT---CHHHHHHHHHHC--CCTTCBCTTCCB
T ss_pred HHHHHHHHHHHHHccccccccccccCcccccccCC-ccHHHHHHH----cC---CHHHHHHHHHcC--CCCcccCCCCCC
Confidence 5567788888888874431 112234567 899999999 99 999999999997 678999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHH
Q 006942 75 AATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYD 154 (624)
Q Consensus 75 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~ 154 (624)
|||+||..|+.++|++|++++++ ++.+|..|.||||+|+..|+.+++++|++++++.+. .+.+|.||||+|+..++.+
T Consensus 76 ~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~ 153 (299)
T 1s70_B 76 ALHQACIDDNVDMVKFLVENGAN-INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGA-VNSEGDTPLDIAEEEAMEE 153 (299)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCCSHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHhcchHH
Confidence 99999999999999999999988 788999999999999999999999999999999888 8999999999999999999
Q ss_pred HHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhh
Q 006942 155 VALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTS 234 (624)
Q Consensus 155 ~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (624)
+++.++...+......+..+.++++.
T Consensus 154 ~~~~ll~~~~~~~~~~~~~~~~~~~~------------------------------------------------------ 179 (299)
T 1s70_B 154 LLQNEVNRQGVDIEAARKEEERIMLR------------------------------------------------------ 179 (299)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHH------------------------------------------------------
T ss_pred HHHHHHhhcCCCchhhhhhhhhHHHH------------------------------------------------------
Confidence 99998876442211111111111111
Q ss_pred cccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHH
Q 006942 235 KIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVA 314 (624)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tp 314 (624)
.+..+...........+..|.||
T Consensus 180 ---------------------------------------------------------~~~~~l~~~~~~~~~~~~~g~t~ 202 (299)
T 1s70_B 180 ---------------------------------------------------------DARQWLNSGHINDVRHAKSGGTA 202 (299)
T ss_dssp ---------------------------------------------------------HHHHHHHHTCCCCCCCTTTCCCH
T ss_pred ---------------------------------------------------------HHHHHHhccCcchhhhcCCCCCH
Confidence 11111111111123356788999
Q ss_pred HHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhc
Q 006942 315 MLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRL 391 (624)
Q Consensus 315 Lh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~ 391 (624)
||+|+..|+.++++.|++. ++++...|..|+||||+|+.+|+.+++++|++.+ ..++.+|..|+||||+|++.
T Consensus 203 L~~A~~~g~~~~v~~Ll~~-g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 203 LHVAAAKGYTEVLKLLIQA-RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL---CDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp HHHHHHHTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCTTTSCCSG
T ss_pred HHHHHHCCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHH
Confidence 9999999999999999999 9888777999999999999999999999999998 56779999999999999754
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=302.56 Aligned_cols=245 Identities=13% Similarity=0.084 Sum_probs=196.1
Q ss_pred CccCCCHHHHHHHHHcCcc----------ccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCC
Q 006942 1 MIEKNDWQGVEDFVTNHPD----------ALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDN 70 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~----------~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~ 70 (624)
|+.+|+.+.+.+++...+. .++.+ +.+| +||||+||. .| +.++|+.|++.+ .+++.+|.
T Consensus 22 Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~g-~t~L~~Aa~----~g---~~~~v~~Ll~~g--~~~~~~~~ 90 (285)
T 3d9h_A 22 ASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGD-AVSD-WSPMHEAAI----HG---HQLSLRNLISQG--WAVNIITA 90 (285)
T ss_dssp --------------------CCSEECCCCTTCSS-SCCS-CCHHHHHHH----TT---CHHHHHHHHHTT--CCSCEECT
T ss_pred HhhcCCCCCcccCCCCccccccchhhhhCcccCC-CccC-CCHHHHHHH----cC---CHHHHHHHHHCC--CCCCCcCC
Confidence 6889999888887665322 23444 8889 999999999 99 999999999997 67899999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Q 006942 71 HGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAA 150 (624)
Q Consensus 71 ~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~ 150 (624)
+|.||||+||..|+.++|++|++++++ ++.+|..|.||||+|+..|+.+++++|++.+++.+. +.+|.||||+|+..
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~ 167 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP--ESDLASPIHEAARR 167 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC--SCTTSCHHHHHHHH
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHc
Confidence 999999999999999999999999888 788999999999999999999999999999988764 55699999999999
Q ss_pred CcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhh
Q 006942 151 NLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESF 230 (624)
Q Consensus 151 ~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (624)
|+.++++.|++.+.++ +.+|.+|.||||+|+..++
T Consensus 168 g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~-------------------------------------------- 202 (285)
T 3d9h_A 168 GHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQ-------------------------------------------- 202 (285)
T ss_dssp TCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTC--------------------------------------------
T ss_pred CCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCc--------------------------------------------
Confidence 9999999999998765 6789999999999997742
Q ss_pred hhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCcc
Q 006942 231 IVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQ 310 (624)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~ 310 (624)
...+++| .+... ....+..
T Consensus 203 --------------------------------------------------------~~~v~~L---l~~ga--~~~~~~~ 221 (285)
T 3d9h_A 203 --------------------------------------------------------RACVKKL---LESGA--DVNQGKG 221 (285)
T ss_dssp --------------------------------------------------------HHHHHHH---HHTTC--CTTCCBT
T ss_pred --------------------------------------------------------HHHHHHH---HHCCC--CCCCCCC
Confidence 1123333 33322 1224778
Q ss_pred ccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 311 LSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 311 g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
|.||||+|+..|+.+++++|+++ +.+....|.+|+||||+|+ ++.+++++|++..
T Consensus 222 g~t~L~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~ 276 (285)
T 3d9h_A 222 QDSPLHAVVRTASEELACLLMDF-GADTQAKNAEGKRPVELVP--PESPLAQLFLERE 276 (285)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhh
Confidence 89999999999999999999999 9988877999999999999 4569999999874
|
| >4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=306.35 Aligned_cols=274 Identities=15% Similarity=0.077 Sum_probs=224.8
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCC-CCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDN-HGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHG 104 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~-~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~ 104 (624)
+.+| +||||.||+ .| +.++|++||++| ++++.++. .|.||||+||..|+.++|++|++++++ ++.++.
T Consensus 22 ~~~~-~t~L~~Av~----~g---~~~~V~~LL~~G--advn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~~~~~ 90 (337)
T 4g8k_A 22 AVED-NHLLIKAVQ----NE---DVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKK 90 (337)
T ss_dssp HHHH-HHHHHHHHH----TT---CHHHHHHHHHHT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCT
T ss_pred CCCC-ChHHHHHHH----cC---CHHHHHHHHHCC--CCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-hhhhcc
Confidence 4457 999999999 99 999999999998 77888775 499999999999999999999999998 788999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCc---------ccCCCCC
Q 006942 105 EGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGR---------DSIDSRR 175 (624)
Q Consensus 105 ~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~---------~~d~~G~ 175 (624)
.+.+|++.++..++.+++..+++.+.+.+. .+..|.||||+|+..|+.++++.+++.+.++.. ..+..|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~ 169 (337)
T 4g8k_A 91 NGATPFILAAIAGSVKLLKLFLSKGADVNE-CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGA 169 (337)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSC
T ss_pred CCCchhHHHHhcccchhhHHhhhccchhhh-hccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCC
Confidence 999999999999999999999999999888 899999999999999999999999998765432 3456799
Q ss_pred CHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhh
Q 006942 176 IILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFG 255 (624)
Q Consensus 176 TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (624)
||||+|++.++
T Consensus 170 T~L~~A~~~g~--------------------------------------------------------------------- 180 (337)
T 4g8k_A 170 TALMDAAEKGH--------------------------------------------------------------------- 180 (337)
T ss_dssp CHHHHHHHHTC---------------------------------------------------------------------
T ss_pred cHHHHHHHCCC---------------------------------------------------------------------
Confidence 99999997642
Q ss_pred hhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhh-cccccccCCccccHHHHHHHHcCC----HHHHHHH
Q 006942 256 AMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEG-VVWTNFQNSAQLSVAMLAAAILGI----PEVVNEF 330 (624)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~-~~~~~~~~~~~g~tpLh~Aa~~g~----~~iv~~L 330 (624)
...+++| .+. ... ....+..|.||+|.++..++ .++++.|
T Consensus 181 -------------------------------~~~v~~L---L~~~gad-~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lL 225 (337)
T 4g8k_A 181 -------------------------------VEVLKIL---LDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLL 225 (337)
T ss_dssp -------------------------------HHHHHHH---HHHSCCC-TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHH
T ss_pred -------------------------------HHHHHHH---HhccCCC-cCccCCCCCcHHHHHHHHcCcccHHHHHHHH
Confidence 1123322 221 111 11267788999998886554 4688999
Q ss_pred HHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHHhH
Q 006942 331 IMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQW 410 (624)
Q Consensus 331 l~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~ 410 (624)
+++ +.++...|..|+||||+|+..++.+++++|++... ..+|.+|.+|+||||+|++.|+.+
T Consensus 226 l~~-gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~--~~vn~~d~~G~TpL~~A~~~g~~~--------------- 287 (337)
T 4g8k_A 226 LDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH--IEINDTDSDGKTALLLAVELKLKK--------------- 287 (337)
T ss_dssp HHT-TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTT--CCTTCBCTTSCBHHHHHHHTTCHH---------------
T ss_pred HHC-CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcC--CcccCcCCCCCCHHHHHHHcCCHH---------------
Confidence 999 99988779999999999999999999999998643 457899999999999999999853
Q ss_pred HHHHHhhcCcccccccCCCCCChhhhhhH
Q 006942 411 FKAIENLVHPFFREATNDLKQTPREVFTE 439 (624)
Q Consensus 411 ~~~v~~~~~~~~~~~~N~~G~Tp~dl~~~ 439 (624)
.|+.++.. --|.+++||+..+.+
T Consensus 288 --iv~~Ll~~----GAd~n~~~~L~~A~~ 310 (337)
T 4g8k_A 288 --IAELLCKR----GASTDCGDLVMTARR 310 (337)
T ss_dssp --HHHHHHTT----SCSSTTCCHHHHHHH
T ss_pred --HHHHHHHC----CCCCCCCCHHHHHHH
Confidence 23433332 124567889988754
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-36 Score=292.25 Aligned_cols=218 Identities=15% Similarity=0.087 Sum_probs=192.3
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHcc--CchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKV--DPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRH 103 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~--~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n 103 (624)
|.+| +||||+||. .| +.++|+.|++.. ...+++.+|..|.||||+|+..|+.+++++|++++++ ++.+|
T Consensus 6 d~~g-~t~L~~A~~----~g---~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~ 76 (241)
T 1k1a_A 6 DEDG-DTPLHIAVV----QG---NLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALD 76 (241)
T ss_dssp -CTT-CCHHHHHHH----TT---CHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCC
T ss_pred CCCC-CcHHHHHHH----cC---CHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccC
Confidence 8899 999999999 99 999999999831 1367889999999999999999999999999999888 77889
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhcC----CCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHH
Q 006942 104 GEGFLPVHDAALYGHKDTFHYLLEVTH----GVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILN 179 (624)
Q Consensus 104 ~~G~TPLh~Aa~~g~~~iv~~Ll~~~~----~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh 179 (624)
..|.||||+|+..|+.+++++|++.++ +.+. .+..|.||||+|+..|+.++++.|++.+.+....
T Consensus 77 ~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~---------- 145 (241)
T 1k1a_A 77 RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEA-RNYDGLTALHVAVNTECQETVQLLLERGADIDAV---------- 145 (241)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC----------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccc-cCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc----------
Confidence 999999999999999999999999987 5555 7899999999999999999999999876543111
Q ss_pred HHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhH
Q 006942 180 TLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLH 259 (624)
Q Consensus 180 ~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (624)
T Consensus 146 -------------------------------------------------------------------------------- 145 (241)
T 1k1a_A 146 -------------------------------------------------------------------------------- 145 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCce
Q 006942 260 KLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSN 339 (624)
Q Consensus 260 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~ 339 (624)
.+..|.||||+|+..|+.++++.|+++ ++++.
T Consensus 146 -----------------------------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~ 177 (241)
T 1k1a_A 146 -----------------------------------------------DIKSGRSPLIHAVENNSLSMVQLLLQH-GANVN 177 (241)
T ss_dssp -----------------------------------------------CTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTT
T ss_pred -----------------------------------------------cccCCCcHHHHHHHcCCHHHHHHHHHc-CCCCC
Confidence 224567888888888999999999999 99888
Q ss_pred ecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCC
Q 006942 340 WSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPS 394 (624)
Q Consensus 340 ~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 394 (624)
..|..|+||||+|+.+++.+++++|++.+ ..++.+|.+|+||||+|++.|+.
T Consensus 178 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~tpl~~A~~~~~~ 229 (241)
T 1k1a_A 178 AQMYSGSSALHSASGRGLLPLVRTLVRSG---ADSSLKNCHNDTPLMVARSRRVI 229 (241)
T ss_dssp CBCTTSCBHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCTTTTCSSHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHhcC---CCCCCcCCCCCCHHHHHHhcCcH
Confidence 77999999999999999999999999998 55779999999999999988764
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=298.50 Aligned_cols=223 Identities=16% Similarity=0.086 Sum_probs=162.1
Q ss_pred hhccCCCCCChHHHHHHHcC-------------CHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcC
Q 006942 64 TLARQDNHGHTAATLSAAKG-------------NLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTH 130 (624)
Q Consensus 64 ~~~~~d~~G~TpLh~Aa~~g-------------~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~ 130 (624)
++|.+|.+|.||||+|+..| +.++++.|++.+++.....|..|.||||+|+..|+.+++++|++.++
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 56889999999999999987 89999999999999777789999999999999999999999999999
Q ss_pred CCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhcccccccc
Q 006942 131 GVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKE 210 (624)
Q Consensus 131 ~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~ 210 (624)
+.+. ++..|.||||+|+..|+.++++.|++.++......|..|.||||+|+..++. .
T Consensus 82 ~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~-------~--------------- 138 (253)
T 1yyh_A 82 DANI-QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVE-------G--------------- 138 (253)
T ss_dssp CTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCS-------S---------------
T ss_pred CCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChH-------H---------------
Confidence 9888 8999999999999999999999999998866788899999999999976421 1
Q ss_pred ccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHH
Q 006942 211 LVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTV 290 (624)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~ 290 (624)
.+
T Consensus 139 ------------------------------------------------------------------------------~v 140 (253)
T 1yyh_A 139 ------------------------------------------------------------------------------ML 140 (253)
T ss_dssp ------------------------------------------------------------------------------HH
T ss_pred ------------------------------------------------------------------------------HH
Confidence 22
Q ss_pred HHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCcc
Q 006942 291 EIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFT 370 (624)
Q Consensus 291 ~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~ 370 (624)
++|.....+. + ..+..|.||||+|+..|+.+++++|+++ +++....|..|+||||+|+.+|+.+++++|++.+
T Consensus 141 ~~Ll~~g~~~---~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-- 213 (253)
T 1yyh_A 141 EDLINSHADV---N-AVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPLFLAAREGSYETAKVLLDHF-- 213 (253)
T ss_dssp HHHHHTTCCT---T-CBCTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--
T ss_pred HHHHHcCCCC---C-CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC--
Confidence 2222211111 2 2677899999999999999999999999 9998777999999999999999999999999998
Q ss_pred ccccccccCCCCchhhhhhhcCCCC
Q 006942 371 TFLFSSRDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 371 ~~~vn~~D~~GnTpLHlAa~~~~~~ 395 (624)
..++.+|..|+||||+|++.|+.+
T Consensus 214 -a~~~~~d~~g~tpl~~A~~~g~~~ 237 (253)
T 1yyh_A 214 -ANRDITDHMDRLPRDIAQERMHHD 237 (253)
T ss_dssp -CCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred -CCccccccCCCCHHHHHHHcCCHH
Confidence 556799999999999999999854
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=313.86 Aligned_cols=253 Identities=12% Similarity=0.021 Sum_probs=210.5
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
|.+| .||||+||. .| +.++|++|++.+ .+++.+|..|.||||+||..|+.++|++|++++++ ..+.+
T Consensus 17 d~~g-~t~L~~Aa~----~g---~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~ 83 (364)
T 3ljn_A 17 DDEN-MEKIHVAAR----KG---QTDEVRRLIETG--VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV---HSLWH 83 (364)
T ss_dssp CHHH-HHHHHHHHH----HT---CHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC---CCCBT
T ss_pred CCCC-CCHHHHHHH----cC---CHHHHHHHHHcC--CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC---ccccC
Confidence 7889 999999999 99 999999999997 77899999999999999999999999999999986 44568
Q ss_pred CChHHHHHHHcCCHHHHHHHHHh----cCCCcc----------------ccCCCCCcHHHHHHHhC--cHHHHHHHHHhC
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEV----THGVDI----------------YSGKDGANVLSFLIAAN--LYDVALDLLKRH 163 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~----~~~~~~----------------~~~~~G~t~Lh~A~~~~--~~~~v~~Ll~~~ 163 (624)
|.||||+|+..|+.+++++|++. +.+.+. ..+.+|.||||+|+..| +.++++.|++.+
T Consensus 84 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g 163 (364)
T 3ljn_A 84 GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG 163 (364)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence 99999999999999999999998 444332 05678999999999999 999999999997
Q ss_pred CCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCccccc
Q 006942 164 PTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTR 243 (624)
Q Consensus 164 ~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (624)
.++ +.+|..|.||||+|+..++
T Consensus 164 a~~-~~~d~~g~t~L~~A~~~g~--------------------------------------------------------- 185 (364)
T 3ljn_A 164 ASP-TAKDKADETPLMRAMEFRN--------------------------------------------------------- 185 (364)
T ss_dssp CCT-TCCCTTSCCHHHHHHHTTC---------------------------------------------------------
T ss_pred CCC-cccCCCCCCHHHHHHHcCC---------------------------------------------------------
Confidence 765 6789999999999998742
Q ss_pred CCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhc-cc-ccccCCccccHHHHHHHHc
Q 006942 244 FGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGV-VW-TNFQNSAQLSVAMLAAAIL 321 (624)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~-~~-~~~~~~~~g~tpLh~Aa~~ 321 (624)
...+++|.....+. .. .+ ..+..|.||||+|+..
T Consensus 186 -------------------------------------------~~~v~~Ll~~g~~~~~~~~~-~~~~~g~t~L~~A~~~ 221 (364)
T 3ljn_A 186 -------------------------------------------REALDLMMDTVPSKSSLRLD-YANKQGNSHLHWAILI 221 (364)
T ss_dssp -------------------------------------------HHHHHHHHHHCSCSSSCCTT-CCCTTCCCTTHHHHTT
T ss_pred -------------------------------------------HHHHHHHHhccccccccccc-ccCCCCCcHHHHHHHc
Confidence 11233332222110 00 11 2677899999999999
Q ss_pred CCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC-cc--------ccccccccCCCCchhhhhhhcC
Q 006942 322 GIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN-FT--------TFLFSSRDKAGNNILHLAGRLV 392 (624)
Q Consensus 322 g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~-~~--------~~~vn~~D~~GnTpLHlAa~~~ 392 (624)
|+.++|++|+++ ++++...|..|+||||+|+.+|+.+++++|++.+ +. .......|..|.|||+.|+..+
T Consensus 222 g~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~ 300 (364)
T 3ljn_A 222 NWEDVAMRFVEM-GIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADP 300 (364)
T ss_dssp TCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCH
T ss_pred CCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhcc
Confidence 999999999999 9998766999999999999999999999999987 21 1112236788999999999887
Q ss_pred CC
Q 006942 393 PS 394 (624)
Q Consensus 393 ~~ 394 (624)
+.
T Consensus 301 ~~ 302 (364)
T 3ljn_A 301 SK 302 (364)
T ss_dssp HH
T ss_pred CH
Confidence 63
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-35 Score=283.07 Aligned_cols=212 Identities=16% Similarity=0.213 Sum_probs=184.0
Q ss_pred CCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcC--CCCcccCCCCC
Q 006942 29 GSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYN--PDLTNIRHGEG 106 (624)
Q Consensus 29 g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~--~~l~~~~n~~G 106 (624)
| +||||.||. .| +.++|+.|++.+ +...+.+|..|.||||+|+..|+.+++++|++++ ++.....|..|
T Consensus 2 g-~t~L~~A~~----~g---~~~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g 72 (228)
T 2dzn_A 2 S-NYPLHQACM----EN---EFFKVQELLHSK-PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSG 72 (228)
T ss_dssp --CCHHHHHHH----TT---CHHHHHHHHHHC-GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTS
T ss_pred C-ccHHHHHHH----hC---CHHHHHHHHhcC-ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCC
Confidence 5 899999999 99 999999999997 4556668999999999999999999999999998 66333388999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhc--CCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 107 FLPVHDAALYGHKDTFHYLLEVT--HGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 107 ~TPLh~Aa~~g~~~iv~~Ll~~~--~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
.||||+|+..|+.+++++|++.+ .+.+. .+..|.||||+|+..|+.++++.|++.+.++ +.
T Consensus 73 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~--------------- 135 (228)
T 2dzn_A 73 WTPFHIACSVGNLEVVKSLYDRPLKPDLNK-ITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RI--------------- 135 (228)
T ss_dssp CCHHHHHHHHCCHHHHHHHHSSSSCCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CC---------------
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCccccc-CCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cc---------------
Confidence 99999999999999999999998 66666 8899999999999999999999999875543 11
Q ss_pred CCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHH
Q 006942 185 PYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRM 264 (624)
Q Consensus 185 ~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (624)
T Consensus 136 -------------------------------------------------------------------------------- 135 (228)
T 2dzn_A 136 -------------------------------------------------------------------------------- 135 (228)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccC-CCceecCC
Q 006942 265 LWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYD-SSSNWSNQ 343 (624)
Q Consensus 265 ~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~d~~~~d~ 343 (624)
.+..|.||||+|+..|+.++++.|++. + .+....|.
T Consensus 136 ------------------------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~d~ 172 (228)
T 2dzn_A 136 ------------------------------------------KDKFNQIPLHRAASVGSLKLIELLCGL-GKSAVNWQDK 172 (228)
T ss_dssp ------------------------------------------CCTTSCCHHHHHHHTTCHHHHHHHHTT-TCCCSCCCCT
T ss_pred ------------------------------------------cCCCCCCHHHHHHHcCCHHHHHHHHhc-CcccccCcCC
Confidence 344567888888888999999999999 8 44444499
Q ss_pred CCCcHHHHHHHcCChhHHHHHh-cCCccccccccccCCCCchhhhhhhcC
Q 006942 344 DGHTIFDHAVLYRREKVFNLIQ-GVNFTTFLFSSRDKAGNNILHLAGRLV 392 (624)
Q Consensus 344 ~G~T~Lh~A~~~~~~~iv~~Ll-~~~~~~~~vn~~D~~GnTpLHlAa~~~ 392 (624)
.|+||||+|+..++.+++++|+ +.+ ..++.+|.+|+||||+|++.+
T Consensus 173 ~g~t~L~~A~~~~~~~~v~~Ll~~~g---a~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 173 QGWTPLFHALAEGHGDAAVLLVEKYG---AEYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHHC---CCSCCBCTTSCBGGGGCSSTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcC---CCCCccCCCCCcHHHHHHHHH
Confidence 9999999999999999999999 777 557799999999999998653
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=290.93 Aligned_cols=233 Identities=16% Similarity=0.169 Sum_probs=167.6
Q ss_pred cccccCCCCCchHHHHHHhhhhhcCC----------cchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHH
Q 006942 21 LTAKIVEPGSMTIFHMIVELLIDAES----------DEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKL 90 (624)
Q Consensus 21 ~~~~~~~~g~~T~Lh~Aa~~~~~~g~----------~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~ 90 (624)
++.+ |.+| +||||+|+. .|+ ..+.++++.|++.+ ....+..|..|.||||+||..|+.++|++
T Consensus 3 vn~~-d~~g-~tpL~~A~~----~g~~~~~~~~~~~~~~~~~v~~Ll~~g-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~ 75 (253)
T 1yyh_A 3 VNVR-GPDG-FTPLMIASC----SGGGLETGNSEEEEDAPAVISDFIYQG-ASLHNQTDRTGETALHLAARYSRSDAAKR 75 (253)
T ss_dssp --------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCCC-CCCC-CcHHHHHHh----ccccccccchhhcCCChHHHHHHHHcc-CCcccccCCCCCcHHHHHHHcCCHHHHHH
Confidence 4455 8899 999999998 661 12689999999997 23335568999999999999999999999
Q ss_pred HHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcc
Q 006942 91 LVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTH-GVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRD 169 (624)
Q Consensus 91 Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~-~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~ 169 (624)
|++++++ ++.+|..|.||||+|+..|+.+++++|++.++ +.+. .+..|.||||+|+..|+.++++.|++.+.++ +.
T Consensus 76 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~ 152 (253)
T 1yyh_A 76 LLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA-RMHDGTTPLILAARLAVEGMLEDLINSHADV-NA 152 (253)
T ss_dssp HHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTC-CCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT-TC
T ss_pred HHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-cCCCCCcHHHHHHHcChHHHHHHHHHcCCCC-CC
Confidence 9999988 78899999999999999999999999999987 5555 8999999999999999999999999988765 67
Q ss_pred cCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcc
Q 006942 170 SIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQ 249 (624)
Q Consensus 170 ~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (624)
+|.+|.||||+|+..++
T Consensus 153 ~d~~g~t~L~~A~~~~~--------------------------------------------------------------- 169 (253)
T 1yyh_A 153 VDDLGKSALHWAAAVNN--------------------------------------------------------------- 169 (253)
T ss_dssp BCTTSCBHHHHHHHHTC---------------------------------------------------------------
T ss_pred cCCCCCCHHHHHHHcCC---------------------------------------------------------------
Confidence 78999999999997642
Q ss_pred hhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHH
Q 006942 250 ITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNE 329 (624)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~ 329 (624)
...+++| .+.....+ ..+..|.||||+|+..|+.++++.
T Consensus 170 -------------------------------------~~~v~~L---l~~ga~~~-~~~~~g~tpL~~A~~~~~~~~v~~ 208 (253)
T 1yyh_A 170 -------------------------------------VDAAVVL---LKNGANKD-MQNNREETPLFLAAREGSYETAKV 208 (253)
T ss_dssp -------------------------------------HHHHHHH---HHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred -------------------------------------HHHHHHH---HHcCCCCC-CcCCCCCCHHHHHHHCCCHHHHHH
Confidence 1122322 22222112 267789999999999999999999
Q ss_pred HHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 330 FIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 330 Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
|+++ +++....|..|+||||+|+++|+.+++++|....
T Consensus 209 Ll~~-ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 209 LLDH-FANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp HHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred HHHc-CCCccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 9999 9998767999999999999999999999998765
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=296.13 Aligned_cols=254 Identities=17% Similarity=0.087 Sum_probs=181.7
Q ss_pred hccCCCCCChHHHHHHHcCCHHHHHHHHhcCCC--CcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCc
Q 006942 65 LARQDNHGHTAATLSAAKGNLRALKLLVKYNPD--LTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGAN 142 (624)
Q Consensus 65 ~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~--l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t 142 (624)
++.+|.+|.||||+||..|+.++|++|++.+++ .++.+|..|.||||+||..|+.+++++|++++++.+. ++..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLV-AERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCC
Confidence 467899999999999999999999999998665 4778999999999999999999999999999999988 8999999
Q ss_pred HHHHHHHhCcHHHHHHHHHhCCCCCccc------------CCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhcccccccc
Q 006942 143 VLSFLIAANLYDVALDLLKRHPTIGRDS------------IDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKE 210 (624)
Q Consensus 143 ~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~------------d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~ 210 (624)
|||+|+..|+.++++.|++.++...... ...+.+|++.++.....
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 137 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPE----------------------- 137 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------------------------
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccc-----------------------
Confidence 9999999999999999999876532211 11122222222211000
Q ss_pred ccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHH
Q 006942 211 LVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTV 290 (624)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~ 290 (624)
....
T Consensus 138 ----------------------------------------------------------------------------~~~~ 141 (282)
T 1oy3_D 138 ----------------------------------------------------------------------------NEEE 141 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------------------------hhhh
Confidence 0000
Q ss_pred HHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecC-CCCCcHHHHHHHcCChhHHHHHhcCCc
Q 006942 291 EIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSN-QDGHTIFDHAVLYRREKVFNLIQGVNF 369 (624)
Q Consensus 291 ~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d-~~G~T~Lh~A~~~~~~~iv~~Ll~~~~ 369 (624)
..+...... ....+..|.||||+|+..|+.+++++|+++ ++++...+ ..|+||||+|+.+|+.+++++|++.+
T Consensus 142 ~~~~~~~~~----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g- 215 (282)
T 1oy3_D 142 PRDEDWRLQ----LEAENYDGHTPLHVAVIHKDAEMVRLLRDA-GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG- 215 (282)
T ss_dssp --CCCGGGG----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-
T ss_pred hhhhhhhhc----CCCcCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-
Confidence 000000000 112677899999999999999999999999 99998884 56999999999999999999999998
Q ss_pred cccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcC-cccccccCCCCCChhhhhhHHHHH
Q 006942 370 TTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVH-PFFREATNDLKQTPREVFTEEHKE 443 (624)
Q Consensus 370 ~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~-~~~~~~~N~~G~Tp~dl~~~~~~~ 443 (624)
..+|.+|.+|+||||+|++.++.+ .++.++. ....+.+|.+|+||++.+.....+
T Consensus 216 --ad~~~~d~~g~tpL~~A~~~~~~~-----------------~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 216 --ADPTARMYGGRTPLGSALLRPNPI-----------------LARLLRAHGAPEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp --CCTTCCCTTSCCHHHHHHTSSCHH-----------------HHHHHHHTTCCCCCCC----------------
T ss_pred --CCCcccccCCCCHHHHHHHcCCcH-----------------HHHHHHHcCCCcCcCCCcccccccccCCcccc
Confidence 667799999999999999999843 1222222 235889999999999998765543
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=281.43 Aligned_cols=214 Identities=18% Similarity=0.176 Sum_probs=189.3
Q ss_pred CCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCC
Q 006942 27 EPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEG 106 (624)
Q Consensus 27 ~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G 106 (624)
..+ +||||.||. .| +.+.++.|++.+ +..++.+|.+|.||||+|+..|+.+++++|++++++ ++.+|..|
T Consensus 4 ~~~-~~~l~~A~~----~g---~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g 73 (231)
T 3aji_A 4 CVS-NIMICNLAY----SG---KLDELKERILAD-KSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAG 73 (231)
T ss_dssp CCS-SSHHHHHHH----HT---CHHHHHHHHHHC-GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTS
T ss_pred ccc-cchHHHHHH----hC---CHHHHHHHHHhc-hhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCC
Confidence 456 899999999 99 999999999986 566888999999999999999999999999999887 78899999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCC
Q 006942 107 FLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPY 186 (624)
Q Consensus 107 ~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~ 186 (624)
.||||+|+..|+.+++++|++++.+.+. ++..|.||||+|+..++.++++.|++.+.+. +.
T Consensus 74 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~----------------- 134 (231)
T 3aji_A 74 WSPLHIAASAGXDEIVKALLVKGAHVNA-VNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DA----------------- 134 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TC-----------------
T ss_pred CCHHHHHHHcCHHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CC-----------------
Confidence 9999999999999999999999999888 8999999999999999999999999875432 11
Q ss_pred CCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhh
Q 006942 187 AFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLW 266 (624)
Q Consensus 187 ~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (624)
T Consensus 135 -------------------------------------------------------------------------------- 134 (231)
T 3aji_A 135 -------------------------------------------------------------------------------- 134 (231)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCC
Q 006942 267 NAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGH 346 (624)
Q Consensus 267 ~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~ 346 (624)
.+..|.||||+|+..|+.++++.|++. +.+....|..|+
T Consensus 135 ----------------------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~ 173 (231)
T 3aji_A 135 ----------------------------------------KDHYDATAMHRAAAKGNLKMVHILLFY-KASTNIQDTEGN 173 (231)
T ss_dssp ----------------------------------------CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSC
T ss_pred ----------------------------------------cCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCC
Confidence 344567888888888889999999998 888776688999
Q ss_pred cHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCC
Q 006942 347 TIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVP 393 (624)
Q Consensus 347 T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 393 (624)
||||+|+.+++.+++++|++.+ ..++.+|.+|+||||+|++.++
T Consensus 174 t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 174 TPLHLACDEERVEEAKFLVTQG---ASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT---CCSCCCCTTSCCHHHHSCHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHhhHH
Confidence 9999999999999999999888 5567899999999999987665
|
| >4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-35 Score=291.62 Aligned_cols=216 Identities=18% Similarity=0.133 Sum_probs=164.6
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCch------hhccCCCCCChHHHHHHHcCCHH-HHHHHHhcCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPE------TLARQDNHGHTAATLSAAKGNLR-ALKLLVKYNPDL 98 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~------~~~~~d~~G~TpLh~Aa~~g~~~-iv~~Ll~~~~~l 98 (624)
|..+ .||||.||+ .| +.++|++|++.+... .++..|..|.||||.|+..++.+ +++.|++.+.+
T Consensus 8 d~~~-~~~L~~A~~----~G---~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad- 78 (269)
T 4b93_B 8 DYRE-VEKLLRAVA----DG---DLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG- 78 (269)
T ss_dssp CCHH-HHHHHHHHH----TT---CHHHHHHHHTCC----------------------------------------CCCC-
T ss_pred Cccc-hhHHHHHHH----cC---CHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC-
Confidence 6667 899999999 99 999999999987432 25678889999999999888765 88999999988
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHH
Q 006942 99 TNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIIL 178 (624)
Q Consensus 99 ~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpL 178 (624)
++.+|.+|.||||+||..|+.+++++|++.+++... ++.+|.||+|.|+..++.++++.|++.+.++ +.
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~--------- 147 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGA-RNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NK--------- 147 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CC---------
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCc-cCCCCCCccccccccChHHHHHHHHHCCCCC-CC---------
Confidence 889999999999999999999999999999999888 8999999999999999999999999876543 22
Q ss_pred HHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhh
Q 006942 179 NTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAML 258 (624)
Q Consensus 179 h~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (624)
T Consensus 148 -------------------------------------------------------------------------------- 147 (269)
T 4b93_B 148 -------------------------------------------------------------------------------- 147 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCc
Q 006942 259 HKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSS 338 (624)
Q Consensus 259 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~ 338 (624)
.+..|.||||+||..|+.++|++|+++ ++++
T Consensus 148 ------------------------------------------------~d~~g~TpL~~A~~~g~~~~v~~Ll~~-gadv 178 (269)
T 4b93_B 148 ------------------------------------------------KDLSGNTPLIYACSGGHHELVALLLQH-GASI 178 (269)
T ss_dssp ------------------------------------------------CCTTCCCHHHHHHHTTCGGGHHHHHHT-TCCT
T ss_pred ------------------------------------------------CCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCC
Confidence 344567777777788888999999999 9998
Q ss_pred eecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCC
Q 006942 339 NWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVP 393 (624)
Q Consensus 339 ~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 393 (624)
+..|..|+||||+|+.+|+.+++++|++.| .++|.+|.+|+||||+|++.++
T Consensus 179 n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G---ad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 179 NASNNKGNTALHEAVIEKHVFVVELLLLHG---ASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp TCBCTTSCBHHHHHHHTTCHHHHHHHHHTT---CCSCCCCTTSCCSGGGSCTTCH
T ss_pred CccccCCCcHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHhCCc
Confidence 877999999999999999999999999998 6677999999999999987653
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-35 Score=307.28 Aligned_cols=231 Identities=17% Similarity=0.143 Sum_probs=197.1
Q ss_pred cccccC-CCCCchHHHHHHhhhhhcCCcchHHHHHHHH--------HccCchhhccCCCCCChHHHHHHHcCCHHHHHHH
Q 006942 21 LTAKIV-EPGSMTIFHMIVELLIDAESDEAICLLDKLA--------SKVDPETLARQDNHGHTAATLSAAKGNLRALKLL 91 (624)
Q Consensus 21 ~~~~~~-~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll--------~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~L 91 (624)
++.+ + ..| +||||+||. .| +.++|+.|+ +.+ .+++.+|.+|.||||+|+..|+.++|++|
T Consensus 117 ~n~~-d~~~g-~t~Lh~Aa~----~g---~~~~v~~Ll~~~~~~ll~~g--a~vn~~d~~g~TpL~~A~~~g~~~iv~~L 185 (373)
T 2fo1_E 117 VNII-DPRHN-RTVLHWIAS----NS---SAEKSEDLIVHEAKECIAAG--ADVNAMDCDENTPLMLAVLARRRRLVAYL 185 (373)
T ss_dssp TTTC-CCSSC-CCHHHHHHC----TT---CCSCCTTHHHHHHHHHHHTC--CCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cccc-CCcCC-CCHHHHHHH----CC---CHHHHHHHHHHHHHHHHhcC--CCCcCCCCCCCCHHHHHHHcChHHHHHHH
Confidence 3444 4 688 999999999 99 998888877 555 77899999999999999999999999999
Q ss_pred HhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhc---CCCccccCCCCCcHHHHHHHhC---cHHHHHHHHHhCCC
Q 006942 92 VKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVT---HGVDIYSGKDGANVLSFLIAAN---LYDVALDLLKRHPT 165 (624)
Q Consensus 92 l~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~---~~~~~~~~~~G~t~Lh~A~~~~---~~~~v~~Ll~~~~~ 165 (624)
++++++ ++.+|..|.||||+|+..|+.+++++|++.+ .+.+. .+.+|.||||+|+..+ +.++++.|++.+.+
T Consensus 186 l~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~ 263 (373)
T 2fo1_E 186 MKAGAD-PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE-LDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK 263 (373)
T ss_dssp HHTTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC-CCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCC
T ss_pred HHCCCC-CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh-cCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCC
Confidence 999998 7889999999999999999999999999987 56666 8999999999999998 89999999999887
Q ss_pred CCc-------ccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccC
Q 006942 166 IGR-------DSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHS 238 (624)
Q Consensus 166 l~~-------~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (624)
+.. ..|..|.||||+|+..++
T Consensus 264 ~~~~~~~~~~~~d~~g~t~Lh~A~~~g~---------------------------------------------------- 291 (373)
T 2fo1_E 264 VDYDGAARKDSEKYKGRTALHYAAQVSN---------------------------------------------------- 291 (373)
T ss_dssp SSCCSGGGTSSSSCCCCCTHHHHHSSCC----------------------------------------------------
T ss_pred cccccccccCcccccCCCHHHHHHHhCC----------------------------------------------------
Confidence 643 357789999999998742
Q ss_pred cccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHH
Q 006942 239 KESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAA 318 (624)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~A 318 (624)
...+++ +.+.........+..|.||||+|
T Consensus 292 ------------------------------------------------~~~v~~---Ll~~~~~~~n~~d~~g~TpL~~A 320 (373)
T 2fo1_E 292 ------------------------------------------------MPIVKY---LVGEKGSNKDKQDEDGKTPIMLA 320 (373)
T ss_dssp ------------------------------------------------HHHHHH---HHHHSCCCTTCCCTTCCCHHHHH
T ss_pred ------------------------------------------------HHHHHH---HHHhcCCCccCcCCCCCCHHHHH
Confidence 112222 22221000113678899999999
Q ss_pred HHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 319 AILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 319 a~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
+..|+.++|++|+++ ++++...|..|+||||+|+.+|+.+++++|++++
T Consensus 321 ~~~g~~~iv~~Ll~~-gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 321 AQEGRIEVVMYLIQQ-GASVEAVDATDHTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp HHHTCHHHHHHHHHT-TCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHc-CCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 999999999999999 9998877999999999999999999999999887
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-34 Score=277.95 Aligned_cols=216 Identities=15% Similarity=0.087 Sum_probs=196.4
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|+..|+.+.++.+++.++..++.+ +.+| .||||+|+. .| +.++|++|++.+ .+++.+|..|.||||+|+
T Consensus 13 A~~~g~~~~v~~ll~~~~~~~~~~-~~~g-~t~L~~A~~----~g---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 81 (231)
T 3aji_A 13 LAYSGKLDELKERILADKSLATRT-DQDS-RTALHWACS----AG---HTEIVEFLLQLG--VPVNDKDDAGWSPLHIAA 81 (231)
T ss_dssp HHHHTCHHHHHHHHHHCGGGGGCC-CTTS-CCHHHHHHH----HT---CHHHHHHHHHTT--CCSCCCCTTSCCHHHHHH
T ss_pred HHHhCCHHHHHHHHHhchhhhhcC-CCCC-CCHHHHHHH----cC---cHHHHHHHHHhC--CCCCCcCCCCCCHHHHHH
Confidence 578999999999999998877666 8999 999999999 99 999999999997 678899999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLL 160 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll 160 (624)
..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++.+.+.+. .+..|.||||+|+..|+.++++.|+
T Consensus 82 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll 159 (231)
T 3aji_A 82 SAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA-KDHYDATAMHRAAAKGNLKMVHILL 159 (231)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 99999999999999988 788999999999999999999999999999999888 8999999999999999999999999
Q ss_pred HhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcc
Q 006942 161 KRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKE 240 (624)
Q Consensus 161 ~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (624)
+.+.++ +.
T Consensus 160 ~~g~~~-~~----------------------------------------------------------------------- 167 (231)
T 3aji_A 160 FYKAST-NI----------------------------------------------------------------------- 167 (231)
T ss_dssp HTTCCS-CC-----------------------------------------------------------------------
T ss_pred hcCCCc-cc-----------------------------------------------------------------------
Confidence 875543 11
Q ss_pred cccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHH
Q 006942 241 STRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAI 320 (624)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~ 320 (624)
.+..|.||||+|+.
T Consensus 168 ------------------------------------------------------------------~~~~g~t~L~~A~~ 181 (231)
T 3aji_A 168 ------------------------------------------------------------------QDTEGNTPLHLACD 181 (231)
T ss_dssp ------------------------------------------------------------------CCTTSCCHHHHHHH
T ss_pred ------------------------------------------------------------------cCCCCCCHHHHHHH
Confidence 34456788888888
Q ss_pred cCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 321 LGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 321 ~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
.|+.+++++|+++ ++++...|..|+||||+|+..++.+++++|.+.+
T Consensus 182 ~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~ 228 (231)
T 3aji_A 182 EERVEEAKFLVTQ-GASIYIENKEEKTPLQVAKGGLGLILKRLAEGEE 228 (231)
T ss_dssp TTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccc
Confidence 8899999999999 9988766999999999999999999999998765
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=284.71 Aligned_cols=227 Identities=12% Similarity=0.043 Sum_probs=194.5
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
++..++.+.++++|.+. .++.+ |.+| .||||+||. .| +.++|+.|++.+ .+++.+ +|.||||+|+
T Consensus 6 ~i~~~~~~~v~~lL~~~--~~~~~-d~~g-~t~L~~A~~----~g---~~~~v~~Ll~~g--~~~~~~--~g~t~L~~A~ 70 (285)
T 3kea_A 6 RINTWKSKQLKSFLSSK--DTFKA-DVHG-HSASYYAIA----DN---NVRLVCTLLNAG--ALKNLL--ENEFPLHQAA 70 (285)
T ss_dssp TGGGCCHHHHHHHHHST--TTTCC-CTTS-CCHHHHHHH----TT---CHHHHHHHHHTT--GGGSCC--TTCCHHHHHT
T ss_pred HHHhcCHHHHHHHHHhC--CCCcc-CCCC-CCHHHHHHH----cC---CHHHHHHHHhCC--CCCCCC--CCCCHHHHHH
Confidence 35678899999999876 35566 8899 999999999 99 999999999997 666666 4899999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCC-CcHHHHHHHhCcHHHHHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDG-ANVLSFLIAANLYDVALDL 159 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G-~t~Lh~A~~~~~~~~v~~L 159 (624)
..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++++++.+. ++..| .||||+|+..|+.+++++|
T Consensus 71 ~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~~t~L~~A~~~~~~~~v~~L 148 (285)
T 3kea_A 71 TLEDTKIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF-YGKTGWKTSFYHAVMLNDVSIVSYF 148 (285)
T ss_dssp TSSSCHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG-CSSSGGGSHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCc-cCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999988 788999999999999999999999999999999888 89999 7999999999999999999
Q ss_pred HHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCc
Q 006942 160 LKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSK 239 (624)
Q Consensus 160 l~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (624)
++.+++..
T Consensus 149 l~~g~~~~------------------------------------------------------------------------ 156 (285)
T 3kea_A 149 LSEIPSTF------------------------------------------------------------------------ 156 (285)
T ss_dssp HTTSCTTC------------------------------------------------------------------------
T ss_pred HhCCCccc------------------------------------------------------------------------
Confidence 98754320
Q ss_pred ccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHH
Q 006942 240 ESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAA 319 (624)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa 319 (624)
....|.||||+|+
T Consensus 157 -------------------------------------------------------------------~~~~g~t~L~~A~ 169 (285)
T 3kea_A 157 -------------------------------------------------------------------DLAILLSCIHITI 169 (285)
T ss_dssp -------------------------------------------------------------------CCSTHHHHHHHHH
T ss_pred -------------------------------------------------------------------cccCCccHHHHHH
Confidence 1125688889999
Q ss_pred HcCCHHHHHHHHHccCCCceecCCCCCcH-HHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCC
Q 006942 320 ILGIPEVVNEFIMAYDSSSNWSNQDGHTI-FDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPS 394 (624)
Q Consensus 320 ~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~-Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 394 (624)
..|+.+++++|+++ ++++...|..|+|| ||+|+.+++.+++++|++.| ..+|.+| |.|+..|+.
T Consensus 170 ~~g~~~~v~~Ll~~-gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~g---ad~~~~~-------~~a~~~~~~ 234 (285)
T 3kea_A 170 KNGHVDMMILLLDY-MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYD---INIYSAN-------LENVLLDDA 234 (285)
T ss_dssp HTTCHHHHHHHHHH-HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSC---BCSTTTT-------GGGGTTTCH
T ss_pred HcChHHHHHHHHHc-CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcC---CCCCCCC-------hhhhhcCCH
Confidence 99999999999998 88877668899997 99999999999999999888 4556776 356666653
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=274.89 Aligned_cols=229 Identities=13% Similarity=0.092 Sum_probs=197.7
Q ss_pred cCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCC
Q 006942 25 IVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHG 104 (624)
Q Consensus 25 ~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~ 104 (624)
+++.| .||||.|+. .| +.++++.|++.+ .+++.+|..|.||||+|+..|+.+++++|++++++.....+.
T Consensus 5 ~d~~~-~~~l~~A~~----~g---~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 74 (240)
T 3eu9_A 5 IDDYS-TWDIVKATQ----YG---IYERCRELVEAG--YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGD 74 (240)
T ss_dssp CSCGG-GCCHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTT
T ss_pred ccccc-chHHHHHHH----cC---ChHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCC
Confidence 37888 999999999 99 999999999997 678899999999999999999999999999999986667777
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 105 EGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 105 ~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
.|.||||+|+..|+.+++++|++.+.+.+. .+..|.||||+|+..|+.++++.|++.+.++ ...|..|.||||+|+..
T Consensus 75 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 75 LNSTPLHWATRQGHLSMVVQLMKYGADPSL-IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYR 152 (240)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred cCCChhHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHh
Confidence 799999999999999999999999999888 8999999999999999999999999987765 67789999999999965
Q ss_pred CCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHH
Q 006942 185 PYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRM 264 (624)
Q Consensus 185 ~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (624)
+.. ..
T Consensus 153 ~~~------~~--------------------------------------------------------------------- 157 (240)
T 3eu9_A 153 THS------VD--------------------------------------------------------------------- 157 (240)
T ss_dssp CCS------ST---------------------------------------------------------------------
T ss_pred CCh------HH---------------------------------------------------------------------
Confidence 321 00
Q ss_pred hhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCC
Q 006942 265 LWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQD 344 (624)
Q Consensus 265 ~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~ 344 (624)
.+++|.....+. ....+..|.||||+|+..|+.++++.|+++ ++++...|..
T Consensus 158 ------------------------~~~~L~~~~~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~ 209 (240)
T 3eu9_A 158 ------------------------PTRLLLTFNVSV---NLGDKYHKNTALHWAVLAGNTTVISLLLEA-GANVDAQNIK 209 (240)
T ss_dssp ------------------------THHHHHHTTCCT---TCCCTTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCBCTT
T ss_pred ------------------------HHHHHHhcCCCc---chhhccCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCC
Confidence 112222111111 222334789999999999999999999999 9888766999
Q ss_pred CCcHHHHHHHcCChhHHHHHhcCC
Q 006942 345 GHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 345 G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
|+||||+|+++|+.+++++|++.+
T Consensus 210 g~t~l~~A~~~~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 210 GESALDLAKQRKNVWMINHLQEAR 233 (240)
T ss_dssp SCBHHHHHHHTTCHHHHHHHHHHC
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhh
Confidence 999999999999999999999887
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-33 Score=271.12 Aligned_cols=218 Identities=15% Similarity=0.160 Sum_probs=189.5
Q ss_pred hhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcH
Q 006942 64 TLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANV 143 (624)
Q Consensus 64 ~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~ 143 (624)
+++.+|.+|.||||+||..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++.+.+.+. ++..|.||
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~ 80 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP-KDAEGSTC 80 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCC-CCTTSCCH
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCC-CCCCCCcH
Confidence 5678999999999999999999999999999988 788999999999999999999999999999998888 89999999
Q ss_pred HHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCC
Q 006942 144 LSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDL 223 (624)
Q Consensus 144 Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 223 (624)
||+|+..|+.+++++|++.++.....
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~~~~~~------------------------------------------------------ 106 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQMDVNC------------------------------------------------------ 106 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCTTC------------------------------------------------------
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCccc------------------------------------------------------
Confidence 99999999999999999876432221
Q ss_pred CCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccc
Q 006942 224 DGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWT 303 (624)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~ 303 (624)
T Consensus 107 -------------------------------------------------------------------------------- 106 (237)
T 3b7b_A 107 -------------------------------------------------------------------------------- 106 (237)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCc
Q 006942 304 NFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNN 383 (624)
Q Consensus 304 ~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnT 383 (624)
.+..|.||||+|+..|+.+++++|++. ++++...|..|+||||+|+..|+.+++++|++.+ ..++.+|..|+|
T Consensus 107 ---~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t 179 (237)
T 3b7b_A 107 ---QDDGGWTPMIWATEYKHVDLVKLLLSK-GSDINIRDNEENICLHWAAFSGCVDIAEILLAAK---CDLHAVNIHGDS 179 (237)
T ss_dssp ---CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTT---CCTTCCCTTCCC
T ss_pred ---CCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcC---CCCCCcCCCCCC
Confidence 344567888888888899999999999 9988766999999999999999999999999998 557799999999
Q ss_pred hhhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcC-cccccccCCCCCChhhhhhHHH
Q 006942 384 ILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVH-PFFREATNDLKQTPREVFTEEH 441 (624)
Q Consensus 384 pLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~-~~~~~~~N~~G~Tp~dl~~~~~ 441 (624)
|||+|++.++.+ .++.++. ....+.+|++|+||++++....
T Consensus 180 ~L~~A~~~~~~~-----------------~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 180 PLHIAARENRYD-----------------CVVLFLSRDSDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp HHHHHHHTTCHH-----------------HHHHHHTTTCCTTCCCTTSCCHHHHSCTTC
T ss_pred HHHHHHHhCCHh-----------------HHHHHHHcCCCCCccCCCCCCHHHHHHHHH
Confidence 999999998843 2333332 2457889999999999986543
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=271.82 Aligned_cols=213 Identities=17% Similarity=0.157 Sum_probs=185.4
Q ss_pred CCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCC
Q 006942 5 NDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGN 84 (624)
Q Consensus 5 G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 84 (624)
|+.+.++.++++........ +.+| +||||+||. .| +.++|++|++.+ .+++.+|..|.||||+|+..|+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~-d~~g-~t~L~~A~~----~g---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~ 70 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQT-DRTG-ETALHLAAR----YS---RSDAAKRLLEAS--ADANIQDNMGRTPLHAAVSADA 70 (223)
T ss_dssp ---CCEETTEETTCCTTCCC-TTTC-CCHHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTC
T ss_pred CcHHHHHHHHHcCCCccccc-CCCC-CchHHHHHH----cC---CHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCC
Confidence 56667777777665544333 7889 999999999 99 999999999997 6788899999999999999999
Q ss_pred HHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCC
Q 006942 85 LRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHP 164 (624)
Q Consensus 85 ~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~ 164 (624)
.+++++|+++++..++.+|..|.||||+|+..|+.+++++|++.+.+.+. .+..|.||||+|+..|+.++++.|++.+.
T Consensus 71 ~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 149 (223)
T 2f8y_A 71 QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLLKNGA 149 (223)
T ss_dssp HHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC-cCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999998866888999999999999999999999999999998888 89999999999999999999999998755
Q ss_pred CCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccC
Q 006942 165 TIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRF 244 (624)
Q Consensus 165 ~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (624)
+. +.
T Consensus 150 ~~-~~--------------------------------------------------------------------------- 153 (223)
T 2f8y_A 150 NK-DM--------------------------------------------------------------------------- 153 (223)
T ss_dssp CT-TC---------------------------------------------------------------------------
T ss_pred CC-CC---------------------------------------------------------------------------
Confidence 43 11
Q ss_pred CCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCH
Q 006942 245 GSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIP 324 (624)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~ 324 (624)
.+..|.||||+|+..|+.
T Consensus 154 --------------------------------------------------------------~~~~g~t~L~~A~~~~~~ 171 (223)
T 2f8y_A 154 --------------------------------------------------------------QNNREETPLFLAAREGSY 171 (223)
T ss_dssp --------------------------------------------------------------CCTTCCCHHHHHHHHTCH
T ss_pred --------------------------------------------------------------cCCCCcCHHHHHHHcCCH
Confidence 345667888888888999
Q ss_pred HHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 325 EVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 325 ~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
++++.|+++ +++....|..|+||||+|+.+++.+++++|++++
T Consensus 172 ~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 172 ETAKVLLDH-FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp HHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHc-CCCCccccccCCCHHHHHHHhcchHHHHHHHHcC
Confidence 999999999 9988766999999999999999999999999988
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=293.04 Aligned_cols=223 Identities=16% Similarity=0.148 Sum_probs=185.9
Q ss_pred hhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCc
Q 006942 63 ETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGAN 142 (624)
Q Consensus 63 ~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t 142 (624)
.+.+..|.+|.||||+||..|+.++|++|++++++ ++.+|..|.||||+||..|+.+++++|++.+++. .+.+|.|
T Consensus 11 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t 86 (364)
T 3ljn_A 11 LNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVS-PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQK 86 (364)
T ss_dssp -----CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBC
T ss_pred CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCC
Confidence 34567889999999999999999999999999988 7899999999999999999999999999999844 4568999
Q ss_pred HHHHHHHhCcHHHHHHHHHh----CCCCC----------------cccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhh
Q 006942 143 VLSFLIAANLYDVALDLLKR----HPTIG----------------RDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIY 202 (624)
Q Consensus 143 ~Lh~A~~~~~~~~v~~Ll~~----~~~l~----------------~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~ 202 (624)
|||+|+..|+.++++.|++. +.+.. ...|..|.||||+|+..+.
T Consensus 87 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~---------------- 150 (364)
T 3ljn_A 87 PIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGP---------------- 150 (364)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCG----------------
T ss_pred HHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCC----------------
Confidence 99999999999999999998 44321 1267889999999997741
Q ss_pred ccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhh
Q 006942 203 NCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQ 282 (624)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 282 (624)
T Consensus 151 -------------------------------------------------------------------------------- 150 (364)
T 3ljn_A 151 -------------------------------------------------------------------------------- 150 (364)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCC-----ceecCCCCCcHHHHHHHcCC
Q 006942 283 KLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSS-----SNWSNQDGHTIFDHAVLYRR 357 (624)
Q Consensus 283 ~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d-----~~~~d~~G~T~Lh~A~~~~~ 357 (624)
.+...+++|.....++ + ..+..|.||||+|+..|+.++|++|++. +++ +...|..|+||||+|+.+|+
T Consensus 151 --~~~~~v~~Ll~~ga~~---~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~g~t~L~~A~~~g~ 223 (364)
T 3ljn_A 151 --EYLEMIKILVQLGASP---T-AKDKADETPLMRAMEFRNREALDLMMDT-VPSKSSLRLDYANKQGNSHLHWAILINW 223 (364)
T ss_dssp --GGHHHHHHHHHHTCCT---T-CCCTTSCCHHHHHHHTTCHHHHHHHHHH-CSCSSSCCTTCCCTTCCCTTHHHHTTTC
T ss_pred --chHHHHHHHHHcCCCC---c-ccCCCCCCHHHHHHHcCCHHHHHHHHhc-ccccccccccccCCCCCcHHHHHHHcCC
Confidence 0222344433332222 2 2677899999999999999999999999 888 55559999999999999999
Q ss_pred hhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCC
Q 006942 358 EKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 358 ~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 395 (624)
.+++++|++.+ ..+|.+|.+|+||||+|+..|+.+
T Consensus 224 ~~~v~~Ll~~g---ad~~~~d~~g~tpL~~A~~~g~~~ 258 (364)
T 3ljn_A 224 EDVAMRFVEMG---IDVNMEDNEHTVPLYLSVRAAMVL 258 (364)
T ss_dssp HHHHHHHHTTT---CCTTCCCTTSCCHHHHHHHTCCHH
T ss_pred HHHHHHHHHcC---CCCCCCCCCCCCHHHHHHHhChHH
Confidence 99999999998 567799999999999999999854
|
| >4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=281.39 Aligned_cols=226 Identities=18% Similarity=0.181 Sum_probs=161.4
Q ss_pred CccCCCHHHHHHHHHcCccc-------cccccCCCCCchHHHHHHhhhhhcCCcchH-HHHHHHHHccCchhhccCCCCC
Q 006942 1 MIEKNDWQGVEDFVTNHPDA-------LTAKIVEPGSMTIFHMIVELLIDAESDEAI-CLLDKLASKVDPETLARQDNHG 72 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~-------~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~-~iv~~Ll~~~~~~~~~~~d~~G 72 (624)
||.+|+.+.|+.||+..... ++.. +..| .||||.|+. .+ +. ++++.|++.| .++|.+|.+|
T Consensus 18 A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~-~~~~-~t~L~~a~~----~~---~~~~~v~~Ll~~G--advn~~d~~G 86 (269)
T 4b93_B 18 AVADGDLEMVRYLLEWTEEDLEDAEDTVSAA-DPEF-CHPLCQCPK----CA---PAQKRLAKVPASG--LGVNVTSQDG 86 (269)
T ss_dssp HHHTTCHHHHHHHHTCC-------------------------------------------------CC--CCTTCCCTTS
T ss_pred HHHcCCHHHHHHHHHCCCccccccccccccc-CccC-CCHHHHHHH----hC---CHHHHHHHHHHCC--CCCCCcCCCC
Confidence 68899999999999875432 3333 6788 999999999 87 65 5889999997 7889999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCc
Q 006942 73 HTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANL 152 (624)
Q Consensus 73 ~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~ 152 (624)
.||||+||..|+.++|++|++.+++ ++.++.+|.||+|+|+..++.+++++|++.+++++. +|..|.||||+|+..|+
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~-~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNK-KDLSGNTPLIYACSGGH 164 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHCCC
Confidence 9999999999999999999999998 788999999999999999999999999999999988 89999999999999999
Q ss_pred HHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhh
Q 006942 153 YDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIV 232 (624)
Q Consensus 153 ~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (624)
.++++.|++.+.++ +.
T Consensus 165 ~~~v~~Ll~~gadv-n~--------------------------------------------------------------- 180 (269)
T 4b93_B 165 HELVALLLQHGASI-NA--------------------------------------------------------------- 180 (269)
T ss_dssp GGGHHHHHHTTCCT-TC---------------------------------------------------------------
T ss_pred HHHHHHHHHCCCCC-Cc---------------------------------------------------------------
Confidence 99999999876543 11
Q ss_pred hhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCcccc
Q 006942 233 TSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLS 312 (624)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~ 312 (624)
.+..|.
T Consensus 181 --------------------------------------------------------------------------~~~~g~ 186 (269)
T 4b93_B 181 --------------------------------------------------------------------------SNNKGN 186 (269)
T ss_dssp --------------------------------------------------------------------------BCTTSC
T ss_pred --------------------------------------------------------------------------cccCCC
Confidence 345667
Q ss_pred HHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCc
Q 006942 313 VAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNN 383 (624)
Q Consensus 313 tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnT 383 (624)
||||+|+..|+.++|+.|+++ |+|+...|.+|+||||+|++++ +++++|...+ ..++..|..|+|
T Consensus 187 t~Lh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~~--~i~~lL~~l~---~~~~~~~~~~~t 251 (269)
T 4b93_B 187 TALHEAVIEKHVFVVELLLLH-GASVQVLNKRQRTAVDCAEQNS--KIMELLQVVP---SCVASLDDVAET 251 (269)
T ss_dssp BHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCSGGGSCTTC--HHHHHTTC-----------------
T ss_pred cHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHhCC--cHHHHHHHHH---HhchhhhhccCC
Confidence 888888888999999999999 9998877999999999998776 4666664443 223344444444
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=266.30 Aligned_cols=215 Identities=19% Similarity=0.150 Sum_probs=188.7
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhcc-CCCCCChHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLAR-QDNHGHTAATLS 79 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~-~d~~G~TpLh~A 79 (624)
|+..|+.+.++.++++.+.....+ +.+| +||||+|+. .| +.+++++|++.+.+.+++. .|..|.||||+|
T Consensus 9 A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g-~t~L~~A~~----~~---~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 9 ACMENEFFKVQELLHSKPSLLLQK-DQDG-RIPLHWSVS----FQ---AHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp HHHTTCHHHHHHHHHHCGGGTTCC-CTTS-CCHHHHHHH----TT---CHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHhCCHHHHHHHHhcCccccccC-CCCC-CCHHHHHHH----cC---CHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence 678999999999999988777656 8999 999999999 99 9999999999986666666 899999999999
Q ss_pred HHcCCHHHHHHHHhcC--CCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHH
Q 006942 80 AAKGNLRALKLLVKYN--PDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVAL 157 (624)
Q Consensus 80 a~~g~~~iv~~Ll~~~--~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~ 157 (624)
+..|+.+++++|++++ ++ ++.+|..|.||||+|+..|+.+++++|++++.+.+. ++..|.||||+|+..|+.++++
T Consensus 80 ~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~ 157 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRI-KDKFNQIPLHRAASVGSLKLIE 157 (228)
T ss_dssp HHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999997 65 778899999999999999999999999999999888 8999999999999999999999
Q ss_pred HHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhccc
Q 006942 158 DLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIH 237 (624)
Q Consensus 158 ~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (624)
.|++.++...+.
T Consensus 158 ~Ll~~g~~~~~~-------------------------------------------------------------------- 169 (228)
T 2dzn_A 158 LLCGLGKSAVNW-------------------------------------------------------------------- 169 (228)
T ss_dssp HHHTTTCCCSCC--------------------------------------------------------------------
T ss_pred HHHhcCcccccC--------------------------------------------------------------------
Confidence 999876322222
Q ss_pred CcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHH
Q 006942 238 SKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLA 317 (624)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~ 317 (624)
.+..|.||||+
T Consensus 170 ---------------------------------------------------------------------~d~~g~t~L~~ 180 (228)
T 2dzn_A 170 ---------------------------------------------------------------------QDKQGWTPLFH 180 (228)
T ss_dssp ---------------------------------------------------------------------CCTTSCCHHHH
T ss_pred ---------------------------------------------------------------------cCCCCCCHHHH
Confidence 34556777777
Q ss_pred HHHcCCHHHHHHHH-HccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcC
Q 006942 318 AAILGIPEVVNEFI-MAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGV 367 (624)
Q Consensus 318 Aa~~g~~~iv~~Ll-~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 367 (624)
|+..|+.++++.|+ +. +.+....|.+|+||||+|+.. ++.++|+++
T Consensus 181 A~~~~~~~~v~~Ll~~~-ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 181 ALAEGHGDAAVLLVEKY-GAEYDLVDNKGAKAEDVALNE---QVKKFFLNN 227 (228)
T ss_dssp HHHTTCHHHHHHHHHHH-CCCSCCBCTTSCBGGGGCSST---THHHHHHTT
T ss_pred HHHcCCHHHHHHHHHhc-CCCCCccCCCCCcHHHHHHHH---HHHHHHHhc
Confidence 88888999999999 77 888776699999999999654 567777653
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=272.16 Aligned_cols=217 Identities=19% Similarity=0.174 Sum_probs=189.6
Q ss_pred CccCCCHHHHHHHHH---cCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHH
Q 006942 1 MIEKNDWQGVEDFVT---NHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAAT 77 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~---~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh 77 (624)
|+..|+.+.++.+++ +.+..++.+ +..| .||||+|+. .| +.+++++|++.+ .+++.+|..|.||||
T Consensus 16 A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~g-~t~L~~A~~----~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~l~ 84 (241)
T 1k1a_A 16 AVVQGNLPAVHRLVNLFQQGGRELDIY-NNLR-QTPLHLAVI----TT---LPSVVRLLVTAG--ASPMALDRHGQTAAH 84 (241)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTCCSCCC-CTTS-CCHHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTSCCHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCCCcc-cccC-CCHHHHHHH----cC---CHHHHHHHHHcC--CCccccCCCCCCHHH
Confidence 678999999999987 355666666 8899 999999999 99 999999999997 678889999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCC---CcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHHHHHhCcH
Q 006942 78 LSAAKGNLRALKLLVKYNPD---LTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVLSFLIAANLY 153 (624)
Q Consensus 78 ~Aa~~g~~~iv~~Ll~~~~~---l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~-~~G~t~Lh~A~~~~~~ 153 (624)
+|+..|+.+++++|++.++. .++.+|..|.||||+|+..|+.+++++|++.+.+.+. .+ ..|.||||+|+..|+.
T Consensus 85 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~~~~ 163 (241)
T 1k1a_A 85 LACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDA-VDIKSGRSPLIHAVENNSL 163 (241)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTTCCCHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccc-ccccCCCcHHHHHHHcCCH
Confidence 99999999999999999772 3778899999999999999999999999999998887 66 8899999999999999
Q ss_pred HHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhh
Q 006942 154 DVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVT 233 (624)
Q Consensus 154 ~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (624)
++++.|++.+.++ +.
T Consensus 164 ~~v~~Ll~~g~~~-~~---------------------------------------------------------------- 178 (241)
T 1k1a_A 164 SMVQLLLQHGANV-NA---------------------------------------------------------------- 178 (241)
T ss_dssp HHHHHHHHTTCCT-TC----------------------------------------------------------------
T ss_pred HHHHHHHHcCCCC-CC----------------------------------------------------------------
Confidence 9999999876543 11
Q ss_pred hcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccH
Q 006942 234 SKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSV 313 (624)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~t 313 (624)
.+..|.|
T Consensus 179 -------------------------------------------------------------------------~~~~g~t 185 (241)
T 1k1a_A 179 -------------------------------------------------------------------------QMYSGSS 185 (241)
T ss_dssp -------------------------------------------------------------------------BCTTSCB
T ss_pred -------------------------------------------------------------------------cCCCCCC
Confidence 3455678
Q ss_pred HHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 314 AMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 314 pLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
|||+|+..|+.++++.|+++ ++++...|..|+||||+|+.+|+.++++.|.+.+
T Consensus 186 ~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 186 ALHSASGRGLLPLVRTLVRS-GADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp HHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred HHHHHHHcCCHHHHHHHHhc-CCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 88888888999999999999 9988767999999999999999999999887654
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=276.55 Aligned_cols=268 Identities=15% Similarity=0.130 Sum_probs=202.7
Q ss_pred HHHhhhhhcCCcchHHHHHHHHHccCchh-------hccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCh
Q 006942 36 MIVELLIDAESDEAICLLDKLASKVDPET-------LARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFL 108 (624)
Q Consensus 36 ~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~-------~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~T 108 (624)
.++. .| +.+.++.++....... ....+..|.||||.||..|+.++|+.|++++++ ++.+|..|.|
T Consensus 4 ~~a~----~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t 75 (299)
T 1s70_B 4 ADAK----QK---RNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLT 75 (299)
T ss_dssp HHHH----HH---HHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCB
T ss_pred hHHH----HH---HHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCC
Confidence 4666 77 8888888887642211 122345678999999999999999999999988 7889999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCC
Q 006942 109 PVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAF 188 (624)
Q Consensus 109 PLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~ 188 (624)
|||+||..|+.+++++|++.+++.+. .+..|.||||+|+..|+.+++++|++.+.++ ...|.+|.||||+|+..+.
T Consensus 76 ~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~-- 151 (299)
T 1s70_B 76 ALHQACIDDNVDMVKFLVENGANINQ-PDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAM-- 151 (299)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHH--
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcch--
Confidence 99999999999999999999999888 8999999999999999999999999998765 6678999999999885420
Q ss_pred CCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhc
Q 006942 189 ASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNA 268 (624)
Q Consensus 189 ~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (624)
T Consensus 152 -------------------------------------------------------------------------------- 151 (299)
T 1s70_B 152 -------------------------------------------------------------------------------- 151 (299)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceec-CCCCCc
Q 006942 269 XMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWS-NQDGHT 347 (624)
Q Consensus 269 ~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~-d~~G~T 347 (624)
.+++..+...........+..+.++++ ..+..++.. +...... +..|+|
T Consensus 152 ---------------------~~~~~~ll~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~-~~~~~~~~~~~g~t 201 (299)
T 1s70_B 152 ---------------------EELLQNEVNRQGVDIEAARKEEERIML--------RDARQWLNS-GHINDVRHAKSGGT 201 (299)
T ss_dssp ---------------------HHHHHHHHHHHTCCHHHHHHHHHHHHH--------HHHHHHHHH-TCCCCCCCTTTCCC
T ss_pred ---------------------HHHHHHHHhhcCCCchhhhhhhhhHHH--------HHHHHHHhc-cCcchhhhcCCCCC
Confidence 011111111000000001111233333 345566776 6666656 899999
Q ss_pred HHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcC-ccccccc
Q 006942 348 IFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVH-PFFREAT 426 (624)
Q Consensus 348 ~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~-~~~~~~~ 426 (624)
|||+|+.+|+.+++++|++.+ ..+|.+|.+|+||||+|+..|+.+ .++.++. ....+.+
T Consensus 202 ~L~~A~~~g~~~~v~~Ll~~g---~d~~~~d~~g~tpL~~A~~~~~~~-----------------~v~~Ll~~gad~~~~ 261 (299)
T 1s70_B 202 ALHVAAAKGYTEVLKLLIQAR---YDVNIKDYDGWTPLHAAAHWGKEE-----------------ACRILVENLCDMEAV 261 (299)
T ss_dssp HHHHHHHHTCHHHHHHHHTTT---CCTTCCCTTCCCHHHHHHHTTCHH-----------------HHHHHHHTTCCTTCC
T ss_pred HHHHHHHCCcHHHHHHHHHcC---CCCCCcCCCCCcHHHHHHhcCCHH-----------------HHHHHHHcCCCCCCc
Confidence 999999999999999999998 567799999999999999999853 1222222 2357889
Q ss_pred CCCCCChhhhhhHHHHHhH
Q 006942 427 NDLKQTPREVFTEEHKELV 445 (624)
Q Consensus 427 N~~G~Tp~dl~~~~~~~l~ 445 (624)
|.+|+||++++.+...+..
T Consensus 262 d~~g~t~l~~A~~~~~~~l 280 (299)
T 1s70_B 262 NKVGQTAFDVADEDILGYL 280 (299)
T ss_dssp CTTSCCTTTSCCSGGGHHH
T ss_pred CCCCCCHHHHHHHHHHHHH
Confidence 9999999999876544443
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=274.51 Aligned_cols=219 Identities=14% Similarity=0.135 Sum_probs=183.5
Q ss_pred cCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCc--hhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccC
Q 006942 25 IVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDP--ETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIR 102 (624)
Q Consensus 25 ~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~--~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~ 102 (624)
.|.+| +||||+|+. .| +.++++.|++.+.. .+++.+|..|.||||+|+..|+.+++++|++++++ ++.+
T Consensus 4 ~d~~g-~t~L~~A~~----~g---~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~ 74 (236)
T 1ikn_D 4 LTEDG-DSFLHLAII----HE---EKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PELR 74 (236)
T ss_dssp ---CC-CCTTHHHHH----TT---CSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCCC
T ss_pred CCCCC-CchhHHHHH----cC---ChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCc
Confidence 38899 999999999 99 99999999998633 26899999999999999999999999999999888 7889
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcCCC------ccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCC
Q 006942 103 HGEGFLPVHDAALYGHKDTFHYLLEVTHGV------DIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRI 176 (624)
Q Consensus 103 n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~------~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~T 176 (624)
|..|.||||+|+..|+.+++++|++.++.. .. .+..|.||||+|+..|+.+++++|++.+.++.. +
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~------ 146 (236)
T 1ikn_D 75 DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKA-TNYNGHTCLHLASIHGYLGIVELLVSLGADVNA-Q------ 146 (236)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGC-CCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTC-C------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-C------
Confidence 999999999999999999999999998652 33 788899999999999999999999988654311 1
Q ss_pred HHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhh
Q 006942 177 ILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGA 256 (624)
Q Consensus 177 pLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (624)
T Consensus 147 -------------------------------------------------------------------------------- 146 (236)
T 1ikn_D 147 -------------------------------------------------------------------------------- 146 (236)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCC
Q 006942 257 MLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDS 336 (624)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 336 (624)
.+..|.||||+|+..|+.+++++|+++ |+
T Consensus 147 --------------------------------------------------~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga 175 (236)
T 1ikn_D 147 --------------------------------------------------EPCNGRTALHLAVDLQNPDLVSLLLKC-GA 175 (236)
T ss_dssp --------------------------------------------------CTTTCCCHHHHHHHTTCHHHHHHHHTT-TC
T ss_pred --------------------------------------------------CCCCCCCHHHHHHHcCCHHHHHHHHHc-CC
Confidence 222667888888888999999999999 99
Q ss_pred CceecCCCCCcHHHHHHHcCChhHHHHHhcCC-ccccccccccCCCCchhhhhhhcCC
Q 006942 337 SSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN-FTTFLFSSRDKAGNNILHLAGRLVP 393 (624)
Q Consensus 337 d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~-~~~~~vn~~D~~GnTpLHlAa~~~~ 393 (624)
++...|..|+||||+|+.+++.+++++|++.+ + .....++.+|.||.+.+.....
T Consensus 176 ~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~--~~~~~~~~~~~~~~~~~~~~~~ 231 (236)
T 1ikn_D 176 DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE--NLQMLPESEDEESYDTESEFTE 231 (236)
T ss_dssp CSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG--GGSSCCCCCTTTCCCCC-----
T ss_pred CCCcccCCCCCHHHHHHccCchHHHHHHHHcchh--hhhcCCccchHHHHhhhccccc
Confidence 98877999999999999999999999999998 3 2345789999999998876654
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A | Back alignment and structure |
|---|
Probab=99.98 E-value=9.4e-32 Score=260.36 Aligned_cols=201 Identities=17% Similarity=0.148 Sum_probs=174.6
Q ss_pred hHHHHHHHHHccCchhhc-cCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q 006942 49 AICLLDKLASKVDPETLA-RQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127 (624)
Q Consensus 49 ~~~iv~~Ll~~~~~~~~~-~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~ 127 (624)
+.+++++|++.+ .+++ ..|.+|.||||+||..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++
T Consensus 3 ~~~~i~~Ll~~g--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 3 APAVISDFIYQG--ASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp --CCEETTEETT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHcC--CCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 788899999987 3444 4589999999999999999999999999887 77889999999999999999999999999
Q ss_pred hcC-CCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhcccc
Q 006942 128 VTH-GVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIP 206 (624)
Q Consensus 128 ~~~-~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~ 206 (624)
.++ ..+. .+..|.||||+|+..++.++++.|++.+.++ +.
T Consensus 80 ~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~------------------------------------- 120 (223)
T 2f8y_A 80 NRATDLDA-RMHDGTTPLILAARLAVEGMLEDLINSHADV-NA------------------------------------- 120 (223)
T ss_dssp BTTSCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TC-------------------------------------
T ss_pred cCCCCccc-CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cC-------------------------------------
Confidence 987 4555 8899999999999999999999999875542 11
Q ss_pred ccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhh
Q 006942 207 VEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTH 286 (624)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 286 (624)
T Consensus 121 -------------------------------------------------------------------------------- 120 (223)
T 2f8y_A 121 -------------------------------------------------------------------------------- 120 (223)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhc
Q 006942 287 MRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQG 366 (624)
Q Consensus 287 ~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 366 (624)
.+..|.||||+|+..|+.+++++|++. +++....|..|+||||+|+.+++.+++++|++
T Consensus 121 --------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 179 (223)
T 2f8y_A 121 --------------------VDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPLFLAAREGSYETAKVLLD 179 (223)
T ss_dssp --------------------BCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred --------------------cCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHH
Confidence 344567888888888999999999999 99887779999999999999999999999999
Q ss_pred CCccccccccccCCCCchhhhhhhcCCCC
Q 006942 367 VNFTTFLFSSRDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 367 ~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 395 (624)
.+ ..++.+|..|+||||+|++.++.+
T Consensus 180 ~g---a~~~~~~~~g~t~l~~A~~~~~~~ 205 (223)
T 2f8y_A 180 HF---ANRDITDHMDRLPRDIAQERMHHD 205 (223)
T ss_dssp TT---CCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred cC---CCCccccccCCCHHHHHHHhcchH
Confidence 98 556799999999999999999843
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=258.72 Aligned_cols=145 Identities=20% Similarity=0.189 Sum_probs=120.9
Q ss_pred CCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCc----ccCC
Q 006942 28 PGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLT----NIRH 103 (624)
Q Consensus 28 ~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~----~~~n 103 (624)
.| +||||.||. .| +.++|+.|++.. ..+++.+|.+|.||||+|+..|+.+++++|++.+++.. +.+|
T Consensus 2 ~g-~t~L~~A~~----~g---~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 72 (232)
T 2rfa_A 2 IW-ESPLLLAAK----EN---DVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSEL 72 (232)
T ss_dssp CT-TCHHHHHHH----TT---CHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTT
T ss_pred CC-CCHHHHHHH----cC---CHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccC
Confidence 36 999999999 99 999999999972 37789999999999999999999999999999988732 5677
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCC-------------CCCcHHHHHHHhCcHHHHHHHHHhCCCCCccc
Q 006942 104 GEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGK-------------DGANVLSFLIAANLYDVALDLLKRHPTIGRDS 170 (624)
Q Consensus 104 ~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~-------------~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~ 170 (624)
..|.||||+|+..|+.+++++|++.+++.+. .+. +|.||||+|+..|+.++++.|++.+.++ +.+
T Consensus 73 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~ 150 (232)
T 2rfa_A 73 YEGQTALHIAVINQNVNLVRALLARGASVSA-RATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI-RAQ 150 (232)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-TCC
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHhCCCCCCc-ccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCC
Confidence 8999999999999999999999999988776 443 7899999999999999999998876654 344
Q ss_pred CCCCCCHHHHHHc
Q 006942 171 IDSRRIILNTLAQ 183 (624)
Q Consensus 171 d~~G~TpLh~Aa~ 183 (624)
|.+|.||||+|+.
T Consensus 151 d~~g~t~L~~A~~ 163 (232)
T 2rfa_A 151 DSLGNTVLHILIL 163 (232)
T ss_dssp CTTSCCHHHHHHT
T ss_pred CCCCCCHHHHHHH
Confidence 5555555555543
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=258.50 Aligned_cols=221 Identities=16% Similarity=0.083 Sum_probs=188.5
Q ss_pred hccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHH
Q 006942 65 LARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVL 144 (624)
Q Consensus 65 ~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~L 144 (624)
++..|..|.||||.|+..|+.++++.|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.+++.....+..|.|||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPL 80 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChh
Confidence 356788999999999999999999999999988 7889999999999999999999999999999887764566799999
Q ss_pred HHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCC
Q 006942 145 SFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLD 224 (624)
Q Consensus 145 h~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 224 (624)
|+|+..|+.++++.|++.+.+. ...|..|.||||+|+..++
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~-------------------------------------- 121 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGH-------------------------------------- 121 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--------------------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCH--------------------------------------
Confidence 9999999999999999987765 5678999999999998742
Q ss_pred CcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhccccc
Q 006942 225 GDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTN 304 (624)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~ 304 (624)
.++++.+.+......
T Consensus 122 -----------------------------------------------------------------~~~~~~Ll~~~~~~~ 136 (240)
T 3eu9_A 122 -----------------------------------------------------------------TSIVAYLIAKGQDVD 136 (240)
T ss_dssp -----------------------------------------------------------------HHHHHHHHHTTCCTT
T ss_pred -----------------------------------------------------------------HHHHHHHHhcCCCcc
Confidence 112222222222112
Q ss_pred ccCCccccHHHHHHHHcCC-HHHHHHHHHccCCCceecC-CCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCC
Q 006942 305 FQNSAQLSVAMLAAAILGI-PEVVNEFIMAYDSSSNWSN-QDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGN 382 (624)
Q Consensus 305 ~~~~~~g~tpLh~Aa~~g~-~~iv~~Ll~~~~~d~~~~d-~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~Gn 382 (624)
..+..|.||||+|+..|+ .++++.|++. +++....+ ..|+||||+|+.+++.+++++|++.+ ..++.+|.+|+
T Consensus 137 -~~~~~g~t~l~~a~~~~~~~~~~~~L~~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~ 211 (240)
T 3eu9_A 137 -MMDQNGMTPLMWAAYRTHSVDPTRLLLTF-NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAG---ANVDAQNIKGE 211 (240)
T ss_dssp -CCCTTSCCHHHHHHHHCCSSTTHHHHHHT-TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT---CCTTCBCTTSC
T ss_pred -ccCCCCCcHHHHHHHhCChHHHHHHHHhc-CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCC
Confidence 267788999999997776 8999999999 99988775 49999999999999999999999998 55779999999
Q ss_pred chhhhhhhcCCCC
Q 006942 383 NILHLAGRLVPSS 395 (624)
Q Consensus 383 TpLHlAa~~~~~~ 395 (624)
||||+|++.++.+
T Consensus 212 t~l~~A~~~~~~~ 224 (240)
T 3eu9_A 212 SALDLAKQRKNVW 224 (240)
T ss_dssp BHHHHHHHTTCHH
T ss_pred CHHHHHHHcCcHH
Confidence 9999999999853
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=248.57 Aligned_cols=148 Identities=14% Similarity=0.097 Sum_probs=130.4
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
+..+ .||||.||. .| +.+.++.|++.+ +.+++..|.+|.||||+|+..|+.+++++|++++++ ++.+|..
T Consensus 2 ~~~~-~~~L~~A~~----~g---~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 71 (201)
T 3hra_A 2 KTYE-VGALLEAAN----QR---DTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-INLQNSI 71 (201)
T ss_dssp -CCC-TTHHHHHHH----TT---CHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred Cccc-ccHHHHHHH----hc---cHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCC
Confidence 4567 899999999 99 999999999986 457899999999999999999999999999999988 7889999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTH-GVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~-~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
|.||||+|+..|+.+++++|++.+. +.+. .+..|.||||+|+..|+.++++.|++.++...+.+|..|.||||+|+..
T Consensus 72 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 150 (201)
T 3hra_A 72 SDSPYLYAGAQGRTEILAYMLKHATPDLNK-HNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGL 150 (201)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCCCTTC-CCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHS
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccCccccc-ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHh
Confidence 9999999999999999999996554 5555 8999999999999999999999999998555566677777777777654
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-32 Score=279.89 Aligned_cols=267 Identities=10% Similarity=-0.021 Sum_probs=182.5
Q ss_pred cCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhcc-----------------CCCCCChHHHH
Q 006942 16 NHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLAR-----------------QDNHGHTAATL 78 (624)
Q Consensus 16 ~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~-----------------~d~~G~TpLh~ 78 (624)
+.+..++.+ +..| .|++| | +.++|+.|++++. +.+. ......+.+|+
T Consensus 40 ~~ga~i~~~-~~~g-~~~~~---------g---~~~~v~~Ll~~g~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 103 (327)
T 1sw6_A 40 SSPLKIMKA-LPSP-VVNDN---------E---QKMKLEAFLQRLL--FPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHV 103 (327)
T ss_dssp TSSCCCEEC-BCCC-CCCCH---------H---HHHHHHHHHHHHH--C-------------------------------
T ss_pred hCCcccccC-CCCC-CcccC---------c---hhHHHHHHHHhcc--CCccccchHhhhcccccccccccCCccchhHH
Confidence 345566666 8889 99865 6 9999999999872 2221 11111234588
Q ss_pred HHHcCCHHHHHHHHhcCCCCccc-CCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCc---HH
Q 006942 79 SAAKGNLRALKLLVKYNPDLTNI-RHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANL---YD 154 (624)
Q Consensus 79 Aa~~g~~~iv~~Ll~~~~~l~~~-~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~---~~ 154 (624)
|+..+..+++++|++.+.+ ++. +|..|.||||+||..|+.++|++|++++++++. ++.+|+||||+|+..|+ .+
T Consensus 104 a~~~~~~~~~~~l~~~g~d-vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~-~d~~g~TpLh~A~~~g~~~~~~ 181 (327)
T 1sw6_A 104 SFDSLLQEVNDAFPNTQLN-LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLY-GDNMGESCLVKAVKSVNNYDSG 181 (327)
T ss_dssp CHHHHHHHHHHHCTTSCCC-SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTB-CCTTCCCHHHHHHHSSHHHHTT
T ss_pred HHHhhHHHHHHHHHhcCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHhcccccHH
Confidence 8888899999999999888 677 899999999999999999999999999999998 99999999999999998 68
Q ss_pred HHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhh
Q 006942 155 VALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTS 234 (624)
Q Consensus 155 ~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (624)
+++.|++......+.+|..|+||||+|++.... ..+....+.++......
T Consensus 182 ~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~---~g~~~~v~~Ll~~~~~~--------------------------- 231 (327)
T 1sw6_A 182 TFEALLDYLYPCLILEDSMNRTILHHIIITSGM---TGCSAAAKYYLDILMGW--------------------------- 231 (327)
T ss_dssp CHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTS---TTCHHHHHHHHHHHHHH---------------------------
T ss_pred HHHHHHHhhhccccCCCCCCCCHHHHHHHHccc---cccHHHHHHHHHHHHHH---------------------------
Confidence 888888876555678899999999999972100 01111222111110000
Q ss_pred cccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHH
Q 006942 235 KIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVA 314 (624)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tp 314 (624)
+ ... ....+... +.....+ ....+..|.||
T Consensus 232 -----------------------~------~~~----~~~~i~~~-------------~~~~g~~----~~~~~~~g~t~ 261 (327)
T 1sw6_A 232 -----------------------I------VKK----QNRPIQSG-------------TNEKESK----PNDKNGERKDS 261 (327)
T ss_dssp -----------------------H------HHG----GGCCEEEC---------------------------------CH
T ss_pred -----------------------H------hcc----cchHHHhh-------------hhcccCC----cccccccCCCh
Confidence 0 000 00000000 0000001 11267789999
Q ss_pred HHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcC
Q 006942 315 MLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLV 392 (624)
Q Consensus 315 Lh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~ 392 (624)
||.|+. +++|+++ + +...|..|+||||+|+.+|+.+++++|++.+ ..+|.+|.+|+||||+|++.|
T Consensus 262 L~~a~~------~~~Ll~~-~--~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~G---ad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 262 ILENLD------LKWIIAN-M--LNAQDSNGDTCLNIAARLGNISIVDALLDYG---ADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHCS------HHHHHHH-T--TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTT---CCTTCCCTTSCCGGGGTCC--
T ss_pred hHHHHH------HHHHHHh-C--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCcccCCCCCCHHHHHHhcC
Confidence 999986 8999987 4 3334999999999999999999999999998 667899999999999999865
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-32 Score=263.95 Aligned_cols=220 Identities=12% Similarity=0.069 Sum_probs=179.4
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHhcCCC---CcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCc
Q 006942 66 ARQDNHGHTAATLSAAKGNLRALKLLVKYNPD---LTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGAN 142 (624)
Q Consensus 66 ~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~---l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t 142 (624)
+.+|.+|.||||+|+..|+.++++.|++.++. .++.+|..|.||||+|+..|+.+++++|++.+++.+. ++..|.|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t 80 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPEL-RDFRGNT 80 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC-CCTTCCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCC
Confidence 35789999999999999999999999998653 4788999999999999999999999999999999888 8999999
Q ss_pred HHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCC
Q 006942 143 VLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHD 222 (624)
Q Consensus 143 ~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 222 (624)
|||+|+..|+.++++.|++.+.+.....
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~---------------------------------------------------- 108 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHS---------------------------------------------------- 108 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSC----------------------------------------------------
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHH----------------------------------------------------
Confidence 9999999999999999998765320000
Q ss_pred CCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhccc
Q 006942 223 LDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVW 302 (624)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~ 302 (624)
.
T Consensus 109 ------------------------------------------------------------------~------------- 109 (236)
T 1ikn_D 109 ------------------------------------------------------------------I------------- 109 (236)
T ss_dssp ------------------------------------------------------------------G-------------
T ss_pred ------------------------------------------------------------------H-------------
Confidence 0
Q ss_pred ccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCC-CCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCC
Q 006942 303 TNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQ-DGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAG 381 (624)
Q Consensus 303 ~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~-~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~G 381 (624)
....+..|.||||+|+..|+.+++++|+++ ++++...|. .|+||||+|+..|+.+++++|++.+ ..++.+|..|
T Consensus 110 -~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g 184 (236)
T 1ikn_D 110 -LKATNYNGHTCLHLASIHGYLGIVELLVSL-GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG---ADVNRVTYQG 184 (236)
T ss_dssp -GGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT---CCSCCCCTTC
T ss_pred -hhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCcccCCC
Confidence 001566789999999999999999999999 999887765 9999999999999999999999998 5677999999
Q ss_pred CchhhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcCc---ccccccCCCCCChhhhhhH
Q 006942 382 NNILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVHP---FFREATNDLKQTPREVFTE 439 (624)
Q Consensus 382 nTpLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~~---~~~~~~N~~G~Tp~dl~~~ 439 (624)
+||||+|+..++.+ .++.++.. .....+|.+|+||.|...+
T Consensus 185 ~tpl~~A~~~~~~~-----------------~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 185 YSPYQLTWGRPSTR-----------------IQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp CCGGGGCTTSSCHH-----------------HHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred CCHHHHHHccCchH-----------------HHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 99999999998853 12222222 2356889999999987543
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-30 Score=249.82 Aligned_cols=197 Identities=18% Similarity=0.182 Sum_probs=166.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhc-CCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCC-----ccccCCCCCcHH
Q 006942 71 HGHTAATLSAAKGNLRALKLLVKY-NPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGV-----DIYSGKDGANVL 144 (624)
Q Consensus 71 ~G~TpLh~Aa~~g~~~iv~~Ll~~-~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~-----~~~~~~~G~t~L 144 (624)
.|+||||+|+..|+.++++.|++. +.+ ++.+|..|.||||+|+..|+.+++++|++.+++. .. .+.+|.|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~~g~t~L 79 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE-VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTS-ELYEGQTAL 79 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCS-TTTTTCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC-cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccc-cCCCCcCHH
Confidence 589999999999999999999998 555 8899999999999999999999999999999875 33 678999999
Q ss_pred HHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCC
Q 006942 145 SFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLD 224 (624)
Q Consensus 145 h~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 224 (624)
|+|+..|+.++++.|++.+.+... .+.. +.++. .
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~--~~~~~---~---------------------------------------- 113 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASVSA-RATG--SVFHY---R---------------------------------------- 113 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC-CCCS--GGGSC---C----------------------------------------
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCc-ccCC--cceee---c----------------------------------------
Confidence 999999999999999998776522 1111 10000 0
Q ss_pred CcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhccccc
Q 006942 225 GDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTN 304 (624)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~ 304 (624)
.
T Consensus 114 -------------------------------------------------------------------------------~ 114 (232)
T 2rfa_A 114 -------------------------------------------------------------------------------P 114 (232)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred ccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHH----HHHhcCC-cc--ccccccc
Q 006942 305 FQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVF----NLIQGVN-FT--TFLFSSR 377 (624)
Q Consensus 305 ~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv----~~Ll~~~-~~--~~~vn~~ 377 (624)
...+..|.||||+|+..|+.++++.|+++ ++++...|..|+||||+|+.+++.+++ ++|++.+ +. ..+.+.+
T Consensus 115 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~ 193 (232)
T 2rfa_A 115 HNLIYYGEHPLSFAACVGSEEIVRLLIEH-GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVP 193 (232)
T ss_dssp TCSCCCCSSHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccC
Confidence 11566889999999999999999999999 999887799999999999999999988 8999888 22 1233789
Q ss_pred cCCCCchhhhhhhcCCCC
Q 006942 378 DKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 378 D~~GnTpLHlAa~~~~~~ 395 (624)
|.+|+||||+|++.|+.+
T Consensus 194 ~~~g~tpl~~A~~~g~~~ 211 (232)
T 2rfa_A 194 NNQGLTPFKLAGVEGNIV 211 (232)
T ss_dssp CTTSCCHHHHHHHHTCHH
T ss_pred CCCCCCHHHHHHHcCCHH
Confidence 999999999999999854
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-30 Score=257.02 Aligned_cols=196 Identities=16% Similarity=0.079 Sum_probs=169.4
Q ss_pred hHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHh
Q 006942 49 AICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128 (624)
Q Consensus 49 ~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~ 128 (624)
..+++++|.+. +++.+|.+|.||||+|+..|+.++|++|++++++ ++.+ +|.||||+|+..|+.+++++|++.
T Consensus 12 ~~~v~~lL~~~----~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ 84 (285)
T 3kea_A 12 SKQLKSFLSSK----DTFKADVHGHSASYYAIADNNVRLVCTLLNAGAL-KNLL--ENEFPLHQAATLEDTKIVKILLFS 84 (285)
T ss_dssp HHHHHHHHHST----TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG-GSCC--TTCCHHHHHTTSSSCHHHHHHHHT
T ss_pred HHHHHHHHHhC----CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCC--CCCCHHHHHHHcCCHHHHHHHHHC
Confidence 45555555543 4789999999999999999999999999999887 5555 599999999999999999999999
Q ss_pred cCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhcccccc
Q 006942 129 THGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVE 208 (624)
Q Consensus 129 ~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~ 208 (624)
+++.+. ++..|.||||+|+..|+.++++.|++.+.++. .
T Consensus 85 ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~--------------------------------------- 123 (285)
T 3kea_A 85 GLDDSQ-FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM-F--------------------------------------- 123 (285)
T ss_dssp TCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG-G---------------------------------------
T ss_pred CCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC-c---------------------------------------
Confidence 999888 89999999999999999999999998855421 0
Q ss_pred ccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhh
Q 006942 209 KELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMR 288 (624)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 288 (624)
T Consensus 124 -------------------------------------------------------------------------------- 123 (285)
T 3kea_A 124 -------------------------------------------------------------------------------- 123 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcccccccCCccc-cHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcC
Q 006942 289 TVEIVRIICEGVVWTNFQNSAQL-SVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGV 367 (624)
Q Consensus 289 ~~~lL~~l~~~~~~~~~~~~~~g-~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 367 (624)
.+..| .||||+|+..|+.+++++|+++ +++... ...|+||||+|+.+|+.+++++|++.
T Consensus 124 ------------------~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ 183 (285)
T 3kea_A 124 ------------------YGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPSTFD-LAILLSCIHITIKNGHVDMMILLLDY 183 (285)
T ss_dssp ------------------CSSSGGGSHHHHHHHTTCHHHHHHHHTT-SCTTCC-CSTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ------------------cCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCcccc-ccCCccHHHHHHHcChHHHHHHHHHc
Confidence 34455 7899999999999999999999 887632 23899999999999999999999999
Q ss_pred CccccccccccCCCCch-hhhhhhcCCCC
Q 006942 368 NFTTFLFSSRDKAGNNI-LHLAGRLVPSS 395 (624)
Q Consensus 368 ~~~~~~vn~~D~~GnTp-LHlAa~~~~~~ 395 (624)
+ ..+|.+|..|+|| ||+|++.++.+
T Consensus 184 g---ad~n~~~~~g~t~~L~~A~~~~~~~ 209 (285)
T 3kea_A 184 M---TSTNTNNSLLFIPDIKLAIDNKDIE 209 (285)
T ss_dssp H---HHTCTTCCCBCCTTHHHHHHHTCHH
T ss_pred C---CCCCcccCCCCChHHHHHHHcCCHH
Confidence 8 5677999999998 99999999854
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-30 Score=255.51 Aligned_cols=144 Identities=17% Similarity=0.162 Sum_probs=121.5
Q ss_pred CCCchHHHHHHhhhhhcCCcchHH----HHHHHHHccCchhhcc----CCCCCChHHHHHHHc---CCHHHHHHHHhcCC
Q 006942 28 PGSMTIFHMIVELLIDAESDEAIC----LLDKLASKVDPETLAR----QDNHGHTAATLSAAK---GNLRALKLLVKYNP 96 (624)
Q Consensus 28 ~g~~T~Lh~Aa~~~~~~g~~~~~~----iv~~Ll~~~~~~~~~~----~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~~~ 96 (624)
.| +||||.||. .| +.+ ++++|++.+ .+++. +|.+|.||||+|+.. |+.++|++|++.++
T Consensus 1 ~G-~t~L~~A~~----~g---~~~~v~~ll~~l~~~g--~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~ 70 (256)
T 2etb_A 1 FD-RDRLFSVVS----RG---VPEELTGLLEYLRWNS--KYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDK 70 (256)
T ss_dssp CC-HHHHHHHHH----HT---CGGGGTTHHHHHHHHT--CCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHH
T ss_pred CC-ccHHHHHHH----cC---CHHHHHHHHHHHHHcC--CCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCC
Confidence 36 999999999 99 987 566676776 66777 899999999999999 99999999999965
Q ss_pred CCc----------ccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCC-------------CCcHHHHHHHhCcH
Q 006942 97 DLT----------NIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKD-------------GANVLSFLIAANLY 153 (624)
Q Consensus 97 ~l~----------~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~-------------G~t~Lh~A~~~~~~ 153 (624)
+.. ..+|..|.||||+|+..|+.+++++|++.+++.+. ++.. |.||||+|+..|+.
T Consensus 71 ~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~ 149 (256)
T 2etb_A 71 DSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL-RACGRFFQKHQGTCFYFGELPLSLAACTKQW 149 (256)
T ss_dssp HTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCH
T ss_pred cccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-ccccccccccccccccCCCCHHHHHHHcCCH
Confidence 421 12457799999999999999999999999999887 6665 99999999999999
Q ss_pred HHHHHHHH---hCCCCCcccCCCCCCHHHHHHc
Q 006942 154 DVALDLLK---RHPTIGRDSIDSRRIILNTLAQ 183 (624)
Q Consensus 154 ~~v~~Ll~---~~~~l~~~~d~~G~TpLh~Aa~ 183 (624)
++++.|++ .+.++ +.+|.+|+||||+|+.
T Consensus 150 ~~v~~Ll~~~~~ga~~-n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 150 DVVTYLLENPHQPASL-EATDSLGNTVLHALVM 181 (256)
T ss_dssp HHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHH
T ss_pred HHHHHHHhccccCCCc-CccCCCCCCHHHHHHH
Confidence 99999999 55543 5667777777777775
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-29 Score=236.90 Aligned_cols=115 Identities=12% Similarity=0.036 Sum_probs=100.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q 006942 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLI 148 (624)
Q Consensus 69 d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~ 148 (624)
+..+.||||.|+..|+.+.++.|++.++..++.+|..|.||||+|+..|+.+++++|++.+++.+. ++..|.||||+|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~ 80 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINL-QNSISDSPYLYAG 80 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHH
Confidence 456889999999999999999999998855889999999999999999999999999999999988 8999999999999
Q ss_pred HhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 149 AANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 149 ~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
..|+.++++.|++..+...+..|..|.||||+|+..
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 116 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEK 116 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHT
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHc
Confidence 999999999999776654455555666666665544
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-30 Score=267.23 Aligned_cols=230 Identities=17% Similarity=0.120 Sum_probs=171.6
Q ss_pred ccCCCHHHHHHHHHcC--ccc--c-ccc----------cCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhc
Q 006942 2 IEKNDWQGVEDFVTNH--PDA--L-TAK----------IVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLA 66 (624)
Q Consensus 2 a~~G~~~~v~~ll~~~--~~~--~-~~~----------~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~ 66 (624)
+..|+.+.++.++++. +.. + .+. ..... .+.+|+|+. .+ ..++++.|++.+ .+++
T Consensus 55 ~~~g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~a~~----~~---~~~~~~~l~~~g--~dvn 124 (327)
T 1sw6_A 55 NDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSN-QQQQHVSFD----SL---LQEVNDAFPNTQ--LNLN 124 (327)
T ss_dssp CCHHHHHHHHHHHHHHHC--------------------------------CHH----HH---HHHHHHHCTTSC--CCSC
T ss_pred ccCchhHHHHHHHHhccCCccccchHhhhcccccccccccCCc-cchhHHHHH----hh---HHHHHHHHHhcC--CCcc
Confidence 3457889999999874 221 0 000 01111 334688888 88 999999999986 7888
Q ss_pred c-CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCC---HHHHHHHHHhc-CCCccccCCCCC
Q 006942 67 R-QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGH---KDTFHYLLEVT-HGVDIYSGKDGA 141 (624)
Q Consensus 67 ~-~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~---~~iv~~Ll~~~-~~~~~~~~~~G~ 141 (624)
. +|.+|.||||+||..|+.++|++|++++++ ++.+|..|.||||+|+..|+ .++++.|++.+ ++.+. ++..|+
T Consensus 125 ~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~-~d~~g~ 202 (327)
T 1sw6_A 125 IPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL-EDSMNR 202 (327)
T ss_dssp SCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE-ECTTCC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccC-CCCCCC
Confidence 8 899999999999999999999999999998 78999999999999999999 78888888887 55666 899999
Q ss_pred cHHHHHHH----hCcHHHHHHHHHhC-------------------CCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhh
Q 006942 142 NVLSFLIA----ANLYDVALDLLKRH-------------------PTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQ 198 (624)
Q Consensus 142 t~Lh~A~~----~~~~~~v~~Ll~~~-------------------~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~ 198 (624)
||||+|+. .|+.++++.|++.. ....+.+|..|.||||.|+.
T Consensus 203 tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~--------------- 267 (327)
T 1sw6_A 203 TILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD--------------- 267 (327)
T ss_dssp CHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS---------------
T ss_pred CHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH---------------
Confidence 99999999 89999999999873 22346678899999998872
Q ss_pred hhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccc
Q 006942 199 RLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKG 278 (624)
Q Consensus 199 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 278 (624)
T Consensus 268 -------------------------------------------------------------------------------- 267 (327)
T 1sw6_A 268 -------------------------------------------------------------------------------- 267 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcC
Q 006942 279 IHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYR 356 (624)
Q Consensus 279 i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~ 356 (624)
+++|... .+ + ..+..|+||||+|+..|+.++|++|+++ |+++...|.+|+||||+|+++|
T Consensus 268 -----------~~~Ll~~--~~---n-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 268 -----------LKWIIAN--ML---N-AQDSNGDTCLNIAARLGNISIVDALLDY-GADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp -----------HHHHHHH--TT---T-CCCTTSCCHHHHHHHHCCHHHHHHHHHT-TCCTTCCCTTSCCGGGGTCC--
T ss_pred -----------HHHHHHh--CC---C-CCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcC
Confidence 1111111 11 2 2678899999999999999999999999 9998877999999999998764
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=259.76 Aligned_cols=149 Identities=15% Similarity=0.087 Sum_probs=125.0
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccC--chhhc----cCCCCCChHHHHHHHc---CCHHHHHHHHhcCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVD--PETLA----RQDNHGHTAATLSAAK---GNLRALKLLVKYNP 96 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~--~~~~~----~~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~~~ 96 (624)
+..| +||||.||+ .| +.++|+.|++.+. ..+++ .+|..|.||||+||.. |+.++|++|++.++
T Consensus 10 d~~g-~t~L~~A~~----~g---~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga 81 (273)
T 2pnn_A 10 RLYD-RRSIFDAVA----QS---NCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR 81 (273)
T ss_dssp -CCC-HHHHHHHHH----TT---CSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred Cccc-chHHHHHHH----cC---CHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc
Confidence 8889 999999999 99 9999999998641 12232 4588999999999987 99999999999864
Q ss_pred CC----------cccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCC--------------CCCcHHHHHHHhCc
Q 006942 97 DL----------TNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGK--------------DGANVLSFLIAANL 152 (624)
Q Consensus 97 ~l----------~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~--------------~G~t~Lh~A~~~~~ 152 (624)
+. ...+|..|.||||+|+..|+.+++++|++.+++.+. .+. .|.||||+|+..|+
T Consensus 82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~ 160 (273)
T 2pnn_A 82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA-AANGDFFKKTKGRPGFYFGELPLSLAACTNQ 160 (273)
T ss_dssp HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTC
T ss_pred cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc-cccccccccccccccccCCCCHHHHHHHcCC
Confidence 31 123677899999999999999999999999998887 665 79999999999999
Q ss_pred HHHHHHHHH---hCCCCCcccCCCCCCHHHHHHcC
Q 006942 153 YDVALDLLK---RHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 153 ~~~v~~Ll~---~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
.+++++|++ .+.+ .+.+|.+|+||||+|+..
T Consensus 161 ~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 161 LAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEV 194 (273)
T ss_dssp HHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHc
Confidence 999999999 5554 366788888888888864
|
| >4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=225.61 Aligned_cols=124 Identities=22% Similarity=0.301 Sum_probs=117.9
Q ss_pred hHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHH
Q 006942 32 TIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVH 111 (624)
Q Consensus 32 T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh 111 (624)
++|+.||+ .| +.++|+.|++.| ++++.+|.+|.||||+|+..|+.++++.|++++++ ++.+|.+|.||||
T Consensus 6 ~~L~~Aa~----~G---~~~~v~~Ll~~G--advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-~~~~d~~g~TpLh 75 (169)
T 4gpm_A 6 KRLIEAAE----NG---NKDRVKDLIENG--ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLH 75 (169)
T ss_dssp HHHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred HHHHHHHH----cC---CHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hhhhccCCCCHHH
Confidence 68999999 99 999999999997 78899999999999999999999999999999998 8899999999999
Q ss_pred HHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCC
Q 006942 112 DAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTI 166 (624)
Q Consensus 112 ~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l 166 (624)
+|+..|+.+++++|++.+++++. +|.+|+||||+|+..|+.++++.|++.+.++
T Consensus 76 ~A~~~g~~~~v~~Ll~~gadvn~-~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~ 129 (169)
T 4gpm_A 76 HAAENGHKEVVKLLISKGADVNA-KDSDGRTPLHHAAENGHKEVVKLLISKGADV 129 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHcCCHHHHHHHHHCcCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 99999999999999999999988 8999999999999999999999999986653
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=248.24 Aligned_cols=195 Identities=13% Similarity=0.039 Sum_probs=161.6
Q ss_pred CCChHHHHHHHcCCHH----HHHHHHhcCCCCccc----CCCCCChHHHHHHHc---CCHHHHHHHHHhcCCCccc----
Q 006942 71 HGHTAATLSAAKGNLR----ALKLLVKYNPDLTNI----RHGEGFLPVHDAALY---GHKDTFHYLLEVTHGVDIY---- 135 (624)
Q Consensus 71 ~G~TpLh~Aa~~g~~~----iv~~Ll~~~~~l~~~----~n~~G~TPLh~Aa~~---g~~~iv~~Ll~~~~~~~~~---- 135 (624)
.|+||||.||..|+.+ ++++|++.+.+ ++. +|..|.||||+|+.. |+.+++++|++.+++.+..
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~-i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKY-LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCC-cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 4889999999999997 56777778887 555 899999999999999 9999999999998765421
Q ss_pred ------cCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccc
Q 006942 136 ------SGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEK 209 (624)
Q Consensus 136 ------~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~ 209 (624)
.|..|.||||+|+..|+.++++.|++.+.++ +.+|..+.++.
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~------------------------------- 127 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQK------------------------------- 127 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSC-------------------------------
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-Ccccccccccc-------------------------------
Confidence 3478999999999999999999999987765 33333221100
Q ss_pred cccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhH
Q 006942 210 ELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRT 289 (624)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~ 289 (624)
T Consensus 128 -------------------------------------------------------------------------------- 127 (256)
T 2etb_A 128 -------------------------------------------------------------------------------- 127 (256)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHH---ccCCCceecCCCCCcHHHHHHH--cCChh-----
Q 006942 290 VEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIM---AYDSSSNWSNQDGHTIFDHAVL--YRREK----- 359 (624)
Q Consensus 290 ~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~---~~~~d~~~~d~~G~T~Lh~A~~--~~~~~----- 359 (624)
. ....+..|.||||+|+..|+.+++++|++ . +.++...|..|+||||+|+. +++.+
T Consensus 128 -----------~--~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~-ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~ 193 (256)
T 2etb_A 128 -----------H--QGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ-PASLEATDSLGNTVLHALVMIADNSPENSALV 193 (256)
T ss_dssp -----------C--SSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC-CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHH
T ss_pred -----------c--ccccccCCCCHHHHHHHcCCHHHHHHHHhcccc-CCCcCccCCCCCCHHHHHHHcccCCchhhHHH
Confidence 0 00134568999999999999999999999 8 88888779999999999999 88888
Q ss_pred --HHHHHhcCCcccccc-------ccccCCCCchhhhhhhcCCCC
Q 006942 360 --VFNLIQGVNFTTFLF-------SSRDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 360 --iv~~Ll~~~~~~~~v-------n~~D~~GnTpLHlAa~~~~~~ 395 (624)
++++|++.+ ..+ +.+|.+|+||||+|++.|+.+
T Consensus 194 ~~iv~~Ll~~g---a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 235 (256)
T 2etb_A 194 IHMYDGLLQMG---ARLCPTVQLEEISNHQGLTPLKLAAKEGKIE 235 (256)
T ss_dssp HHHHHHHHHHH---HHHSTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHcC---CCcccccccccccCCCCCCHHHHHHHhCCHH
Confidence 999999998 334 799999999999999999854
|
| >4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=226.13 Aligned_cols=152 Identities=26% Similarity=0.320 Sum_probs=140.6
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
||++|+.+.|+.+++.. .+++.+ |.+| +||||+|+. .| +.++++.|++.+ .+++.+|.+|.||||+||
T Consensus 11 Aa~~G~~~~v~~Ll~~G-advn~~-d~~g-~t~l~~a~~----~~---~~~~~~~ll~~g--ad~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 11 AAENGNKDRVKDLIENG-ADVNAS-DSDG-RTPLHHAAE----NG---HKEVVKLLISKG--ADVNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHTTCHHHHHHHHHTT-CCTTCC-CTTS-CCHHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHCC-CCCCCc-CCCC-CCHHHHHHH----cC---CHHHHHHHHhcc--cchhhhccCCCCHHHHHH
Confidence 68899999999999875 456666 8999 999999999 99 999999999997 788999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLL 160 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll 160 (624)
..|+.++|++|++++++ ++.+|.+|.||||+||..|+.+++++|++.+++.+. +|.+|+||||+|+..|+.++++.|+
T Consensus 79 ~~g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 79 ENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNT-SDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999998 889999999999999999999999999999999988 8999999999999999999999999
Q ss_pred HhCCCC
Q 006942 161 KRHPTI 166 (624)
Q Consensus 161 ~~~~~l 166 (624)
+++.++
T Consensus 157 ~~GA~i 162 (169)
T 4gpm_A 157 KQGGWL 162 (169)
T ss_dssp TC----
T ss_pred HCCCCc
Confidence 998865
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-29 Score=248.62 Aligned_cols=147 Identities=18% Similarity=0.114 Sum_probs=122.7
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHH----ccCchhhccC----CCCCChHHHHHH---HcCCHHHHHHHHhc
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLAS----KVDPETLARQ----DNHGHTAATLSA---AKGNLRALKLLVKY 94 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~----~~~~~~~~~~----d~~G~TpLh~Aa---~~g~~~iv~~Ll~~ 94 (624)
+..| +|+||.||+ .| +.+.|+.|++ .+ .+++.. |..|.||||+|+ ..|+.++|++|++.
T Consensus 2 ~~~~-~~~L~~A~~----~g---~~~~v~~ll~~l~~~~--~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~ 71 (260)
T 3jxi_A 2 KVFN-RPILFDIVS----RG---SPDGLEGLLSFLLTHK--KRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDI 71 (260)
T ss_dssp CCCC-HHHHHHHHH----HT---CGGGGTTHHHHHHHHT--CCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHH
T ss_pred ccch-HHHHHHHHH----hC---CHHHHHHHHHHHHhcC--CCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHh
Confidence 5678 999999999 99 9996555555 65 444544 477999999999 78999999999998
Q ss_pred CCC----------CcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccC--------------CCCCcHHHHHHHh
Q 006942 95 NPD----------LTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG--------------KDGANVLSFLIAA 150 (624)
Q Consensus 95 ~~~----------l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~--------------~~G~t~Lh~A~~~ 150 (624)
+++ .....|..|.||||+||..|+.+++++|++.+++.+. .+ ..|.||||+|+..
T Consensus 72 g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 150 (260)
T 3jxi_A 72 AEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA-QARGRFFQPKDEGGYFYFGELPLSLAACT 150 (260)
T ss_dssp HHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCEECCCSSSCCCCSCCSCSSHHHHHHHT
T ss_pred cccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc-cccccccCcccccccccCCCCHHHHHHHc
Confidence 532 1445566899999999999999999999999999887 66 6899999999999
Q ss_pred CcHHHHHHHHH---hCCCCCcccCCCCCCHHHHHHcC
Q 006942 151 NLYDVALDLLK---RHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 151 ~~~~~v~~Ll~---~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
|+.++++.|++ .+.++ +.+|.+|+||||+|++.
T Consensus 151 g~~~~v~~Ll~~~~~ga~~-~~~d~~g~TpLh~A~~~ 186 (260)
T 3jxi_A 151 NQPHIVHYLTENGHKQADL-RRQDSRGNTVLHALVAI 186 (260)
T ss_dssp TCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHHHhccccCCCC-cccCCCCCcHHHHHHHh
Confidence 99999999999 55544 66788888888888854
|
| >4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=246.14 Aligned_cols=193 Identities=15% Similarity=0.174 Sum_probs=170.1
Q ss_pred CCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCC
Q 006942 28 PGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGF 107 (624)
Q Consensus 28 ~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~ 107 (624)
.+ ++++|.|+. .| +.+.++.+++.+.+..++.+|.+|.||||+||..|+.++|++|++.++..++.+|..|.
T Consensus 75 ~~-~~~l~~a~~----~~---~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~ 146 (276)
T 4hbd_A 75 AC-RSDAHPELV----RR---HLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGY 146 (276)
T ss_dssp HH-STTCCHHHH----HH---HHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSC
T ss_pred Hh-ccCCCHHHH----HH---HHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCC
Confidence 35 788899999 99 99999999988755568999999999999999999999999999999855889999999
Q ss_pred hHHHHHH-----HcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 006942 108 LPVHDAA-----LYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLA 182 (624)
Q Consensus 108 TPLh~Aa-----~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa 182 (624)
||||+|+ ..++.+++++|++.+..... .+..|.||||+|+..|+.++++.|++.+.++ +.
T Consensus 147 tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~------------- 211 (276)
T 4hbd_A 147 SPIMLTALATLKTQDDIETVLQLFRLGNINAK-ASQAGQTALMLAVSHGRVDVVKALLACEADV-NV------------- 211 (276)
T ss_dssp CHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TC-------------
T ss_pred CHHHHHHHHHhhhhhhHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CC-------------
Confidence 9999999 67889999999999988777 8889999999999999999999999876543 11
Q ss_pred cCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHH
Q 006942 183 QKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLH 262 (624)
Q Consensus 183 ~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (624)
T Consensus 212 -------------------------------------------------------------------------------- 211 (276)
T 4hbd_A 212 -------------------------------------------------------------------------------- 211 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHH-ccCCCceec
Q 006942 263 RMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIM-AYDSSSNWS 341 (624)
Q Consensus 263 ~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~-~~~~d~~~~ 341 (624)
.+..|.||||+|+..|+.++++.|++ . +.++...
T Consensus 212 --------------------------------------------~d~~G~TpLh~A~~~g~~~iv~~Ll~~~-gad~~~~ 246 (276)
T 4hbd_A 212 --------------------------------------------QDDDGSTALMCACEHGHKEIAGLLLAVP-SCDISLT 246 (276)
T ss_dssp --------------------------------------------CCTTSCCHHHHHHHHTCHHHHHHHHTST-TCCTTCC
T ss_pred --------------------------------------------CCCCCCCHHHHHHHCCCHHHHHHHHhcC-CCCCcCc
Confidence 34566788888888899999999999 6 7777666
Q ss_pred CCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 342 NQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 342 d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
|..|+||||+|+.+|+.+++++|+++.
T Consensus 247 d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 247 DRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999999999865
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=239.37 Aligned_cols=155 Identities=19% Similarity=0.183 Sum_probs=130.1
Q ss_pred CccCCCHHHHHHHHHc---Cccccc---cccCCCCCchHHHHHHhhhhhc---CCcchHHHHHHHHHccCch-----hhc
Q 006942 1 MIEKNDWQGVEDFVTN---HPDALT---AKIVEPGSMTIFHMIVELLIDA---ESDEAICLLDKLASKVDPE-----TLA 66 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~---~~~~~~---~~~~~~g~~T~Lh~Aa~~~~~~---g~~~~~~iv~~Ll~~~~~~-----~~~ 66 (624)
||..|+.+.|+.+++. .+..++ ...+..| +||||+||. . | +.++|++|++.+... .++
T Consensus 20 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g-~tpL~~A~~----~~~~g---~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 20 AVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETG-KTCLLKAML----NLHNG---QNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp HHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTC-CCHHHHHHH----SCBTT---BCHHHHHHHHHHHHTTCHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHhhcccccCCcccccCcCC-CCHHHHHHH----HHhcC---ChHHHHHHHHhhccccchhHHhh
Confidence 6789999999999874 222222 1237789 999999998 7 9 999999999987321 133
Q ss_pred c----CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCC--------------CCChHHHHHHHcCCHHHHHHHHH-
Q 006942 67 R----QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHG--------------EGFLPVHDAALYGHKDTFHYLLE- 127 (624)
Q Consensus 67 ~----~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~--------------~G~TPLh~Aa~~g~~~iv~~Ll~- 127 (624)
. +|..|.||||+|+..|+.++|++|++++++ ++.++. .|.||||+|+..|+.+++++|++
T Consensus 92 ~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 170 (273)
T 2pnn_A 92 ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQN 170 (273)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 3 677999999999999999999999999988 677776 79999999999999999999999
Q ss_pred --hcCCCccccCCCCCcHHHHHHHhCc---------HHHHHHHHHhCCC
Q 006942 128 --VTHGVDIYSGKDGANVLSFLIAANL---------YDVALDLLKRHPT 165 (624)
Q Consensus 128 --~~~~~~~~~~~~G~t~Lh~A~~~~~---------~~~v~~Ll~~~~~ 165 (624)
.+.+.+. +|.+|+||||+|+..|+ .++++.|++.+.+
T Consensus 171 ~~~gad~~~-~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~ 218 (273)
T 2pnn_A 171 SWQPADISA-RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK 218 (273)
T ss_dssp SSCCCCTTC-CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcee-eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh
Confidence 8888888 89999999999999887 6788888876543
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-27 Score=217.36 Aligned_cols=170 Identities=22% Similarity=0.207 Sum_probs=145.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Q 006942 72 GHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAAN 151 (624)
Q Consensus 72 G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~ 151 (624)
+.||||.||..|+.++++.|++.++..++.+|..|.||||+|+..|+.+++++|++.+++.+. .+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI-LAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-hcccCCCHHHHHHHCC
Confidence 468999999999999999999999988889999999999999999999999999999999888 8999999999999999
Q ss_pred cHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhh
Q 006942 152 LYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFI 231 (624)
Q Consensus 152 ~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (624)
+.++++.|++.+.++ +.
T Consensus 81 ~~~~v~~Ll~~g~~~-~~-------------------------------------------------------------- 97 (172)
T 3v30_A 81 YTDIVGLLLERDVDI-NI-------------------------------------------------------------- 97 (172)
T ss_dssp CHHHHHHHHTTTCCT-TC--------------------------------------------------------------
T ss_pred CHHHHHHHHHcCCCC-CC--------------------------------------------------------------
Confidence 999999999875442 11
Q ss_pred hhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccc
Q 006942 232 VTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQL 311 (624)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g 311 (624)
.+..|
T Consensus 98 ---------------------------------------------------------------------------~~~~g 102 (172)
T 3v30_A 98 ---------------------------------------------------------------------------YDWNG 102 (172)
T ss_dssp ---------------------------------------------------------------------------CCTTS
T ss_pred ---------------------------------------------------------------------------CCCCC
Confidence 34566
Q ss_pred cHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCch
Q 006942 312 SVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNI 384 (624)
Q Consensus 312 ~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTp 384 (624)
.||||+|+..|+.++++.|+++ +++....|..|+||||+|+..++.+++++|++++ ..+..++..|.||
T Consensus 103 ~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~---~~~~~~~~~~~~p 171 (172)
T 3v30_A 103 GTPLLYAVRGNHVKCVEALLAR-GADLTTEADSGYTPMDLAVALGYRKVQQVIENHI---LKLFQSNLVPADP 171 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH---HHHSCC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHH---HHHhcccCCCCCC
Confidence 7888888888999999999999 9888767999999999999999999999999988 3445788888887
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-27 Score=220.72 Aligned_cols=164 Identities=17% Similarity=0.173 Sum_probs=148.0
Q ss_pred hhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcH
Q 006942 64 TLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANV 143 (624)
Q Consensus 64 ~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~ 143 (624)
.++.+|..|.||||+||..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|++.+++.+. .+..|.||
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~ 104 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT-KDFSGKTP 104 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCCH
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc-cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcH
Confidence 4678899999999999999999999999999887 778999999999999999999999999999999888 89999999
Q ss_pred HHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCC
Q 006942 144 LSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDL 223 (624)
Q Consensus 144 Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 223 (624)
||+|+..|+.++++.|++.+.++ +.
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~-~~------------------------------------------------------ 129 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGANV-ND------------------------------------------------------ 129 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCS-SC------------------------------------------------------
T ss_pred HHHHHHcCCHHHHHHHHHCCCCC-CC------------------------------------------------------
Confidence 99999999999999999876543 11
Q ss_pred CCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccc
Q 006942 224 DGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWT 303 (624)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~ 303 (624)
T Consensus 130 -------------------------------------------------------------------------------- 129 (192)
T 2rfm_A 130 -------------------------------------------------------------------------------- 129 (192)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 304 NFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 304 ~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
.+..|.||||+|+..|+.+++++|+++ ++++...|..|+||||+|+..|+.+++++|++.+
T Consensus 130 ---~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 130 ---RNLEGETPLIVASKYGRSEIVKKLLEL-GADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp ---CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 345667888888888999999999999 9988777999999999999999999999998764
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-28 Score=239.74 Aligned_cols=202 Identities=13% Similarity=0.060 Sum_probs=158.6
Q ss_pred HHHHHHccCc-hhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCC
Q 006942 53 LDKLASKVDP-ETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHG 131 (624)
Q Consensus 53 v~~Ll~~~~~-~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~ 131 (624)
|+.|++.+.+ ...+..+..|.||||.||..|+.++|++|++.+++ ++.+|..|.||||+||..|+.+++++|++.+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 4567776532 23455667788999999999999999999999887 788999999999999999999999999999999
Q ss_pred CccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccc
Q 006942 132 VDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKEL 211 (624)
Q Consensus 132 ~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~ 211 (624)
.+. +|..|.||||+|+..|+.++++.|++.+.++....+.+|.||||+|+.
T Consensus 80 ~n~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a---------------------------- 130 (229)
T 2vge_A 80 VNS-PDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDP---------------------------- 130 (229)
T ss_dssp TTC-CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCT----------------------------
T ss_pred CCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHH----------------------------
Confidence 988 899999999999999999999999998776543333455555555410
Q ss_pred cCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHH
Q 006942 212 VPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVE 291 (624)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~ 291 (624)
T Consensus 131 -------------------------------------------------------------------------------- 130 (229)
T 2vge_A 131 -------------------------------------------------------------------------------- 130 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccc
Q 006942 292 IVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTT 371 (624)
Q Consensus 292 lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~ 371 (624)
+..|+.+++++|++. +++....|..|.||+|.++..+. .++|++.+ .+
T Consensus 131 ---------------------------~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~~g-a~ 178 (229)
T 2vge_A 131 ---------------------------YREGYADCATYLADV-EQSMGLMNSGAVYALWDYSAEFG---DELSFREG-ES 178 (229)
T ss_dssp ---------------------------TSTTHHHHHHHHHHH-HHHTTTSGGGEEEESSCBCCSST---TBCCBCTT-CE
T ss_pred ---------------------------HhcChHHHHHHHHHc-CCCcccccCCchHHHHHHhhccc---cccCcccc-cc
Confidence 455677999999999 88877668899999997655543 35667776 12
Q ss_pred cccccccCCCCchhhhhhhcCCCCC
Q 006942 372 FLFSSRDKAGNNILHLAGRLVPSSE 396 (624)
Q Consensus 372 ~~vn~~D~~GnTpLHlAa~~~~~~~ 396 (624)
..++.+|.+|+||||+|++.|+.++
T Consensus 179 ~~~~~~d~~G~TpL~~A~~~g~~~~ 203 (229)
T 2vge_A 179 VTVLRRDGPEETDWWWAALHGQEGY 203 (229)
T ss_dssp EEEEESSCTTCSSEEEEEETTEEEE
T ss_pred ccccccCCCcccHHHHHHHcCCcce
Confidence 3378999999999999999998764
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.5e-28 Score=238.38 Aligned_cols=155 Identities=21% Similarity=0.217 Sum_probs=129.5
Q ss_pred CccCCCHHHHHHHHH---cCccccccc---cCCCCCchHHHHHH---hhhhhcCCcchHHHHHHHHHccCc---------
Q 006942 1 MIEKNDWQGVEDFVT---NHPDALTAK---IVEPGSMTIFHMIV---ELLIDAESDEAICLLDKLASKVDP--------- 62 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~---~~~~~~~~~---~~~~g~~T~Lh~Aa---~~~~~~g~~~~~~iv~~Ll~~~~~--------- 62 (624)
||..|+.+.++.+++ +.+..++.. .+.+| +||||+|+ + .| +.++|++|++.+..
T Consensus 12 A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g-~t~L~~A~~~~~----~g---~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 12 IVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTG-KTCLPKALLNLS----AG---RNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp HHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTC-CCHHHHHHTSCB----TT---BCTHHHHHHHHHHHTTCHHHHHT
T ss_pred HHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCC-CcHHHHHHHHhh----cC---CHHHHHHHHHhcccccchHhhhc
Confidence 678899998887777 233333332 13779 99999999 7 79 99999999998632
Q ss_pred hhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCC--------------CCCChHHHHHHHcCCHHHHHHHHH-
Q 006942 63 ETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRH--------------GEGFLPVHDAALYGHKDTFHYLLE- 127 (624)
Q Consensus 63 ~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n--------------~~G~TPLh~Aa~~g~~~iv~~Ll~- 127 (624)
..++..|..|.||||+||..|+.++|++|++++++ ++.+| ..|.||||+|+..|+.+++++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 162 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN 162 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 22455666999999999999999999999999988 67777 689999999999999999999999
Q ss_pred --hcCCCccccCCCCCcHHHHHHHhCc---------HHHHHHHHHhCCC
Q 006942 128 --VTHGVDIYSGKDGANVLSFLIAANL---------YDVALDLLKRHPT 165 (624)
Q Consensus 128 --~~~~~~~~~~~~G~t~Lh~A~~~~~---------~~~v~~Ll~~~~~ 165 (624)
.+.+.+. +|.+|+||||+|+..++ .++++.|++.+.+
T Consensus 163 ~~~ga~~~~-~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~ 210 (260)
T 3jxi_A 163 GHKQADLRR-QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK 210 (260)
T ss_dssp SSCCCCTTC-CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcc-cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc
Confidence 8888888 89999999999998877 6888888877543
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.5e-27 Score=216.26 Aligned_cols=163 Identities=14% Similarity=0.080 Sum_probs=144.2
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
||..|+.+.++.++++.+..++.+ +..| .||||+||. .| +.++|++|++.+ .+++.+|..|.||||+|+
T Consensus 9 A~~~g~~~~v~~ll~~~~~~~~~~-~~~g-~t~L~~A~~----~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 77 (172)
T 3v30_A 9 LAAQGELDQLKEHLRKGDNLVNKP-DERG-FTPLIWASA----FG---EIETVRFLLEWG--ADPHILAKERESALSLAS 77 (172)
T ss_dssp HHHTTCHHHHHHHHTTCSGGGGCC-CTTS-CCHHHHHHH----TT---CHHHHHHHHHHT--CCTTCCCTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCcccccCC-CCCC-CCHHHHHHH----cC---CHHHHHHHHHcC--CCchhhcccCCCHHHHHH
Confidence 678999999999999988877777 8899 999999999 99 999999999997 678889999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLL 160 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll 160 (624)
..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++.+++.+. ++..|.||||+|+..|+.++++.|+
T Consensus 78 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 78 TGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT-EADSGYTPMDLAVALGYRKVQQVIE 155 (172)
T ss_dssp HTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 99999999999999888 788999999999999999999999999999999888 8999999999999999999999999
Q ss_pred HhCCCCCcccCCCCCCH
Q 006942 161 KRHPTIGRDSIDSRRII 177 (624)
Q Consensus 161 ~~~~~l~~~~d~~G~Tp 177 (624)
++..++ ...+..|.||
T Consensus 156 ~~~~~~-~~~~~~~~~p 171 (172)
T 3v30_A 156 NHILKL-FQSNLVPADP 171 (172)
T ss_dssp HHHHHH-SCC-------
T ss_pred HHHHHH-hcccCCCCCC
Confidence 987765 3456667766
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-26 Score=211.48 Aligned_cols=127 Identities=24% Similarity=0.279 Sum_probs=118.3
Q ss_pred CCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCC
Q 006942 27 EPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEG 106 (624)
Q Consensus 27 ~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G 106 (624)
+.. .||||.|+. .| +.++++.|++.+ .+++.+|..|.||||+|+. |+.+++++|++++++ ++.+|..|
T Consensus 3 ~~~-~~~L~~A~~----~g---~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g 70 (162)
T 1ihb_A 3 EPW-GNELASAAA----RG---DLEQLTSLLQNN--VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-PDLKDRTG 70 (162)
T ss_dssp --C-HHHHHHHHH----HT---CHHHHHHHTTSC--CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTS
T ss_pred chH-hhHHHHHHH----cC---CHHHHHHHHhCC--CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCC
Confidence 456 899999999 99 999999999986 6788999999999999999 999999999999888 78899999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCC
Q 006942 107 FLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTI 166 (624)
Q Consensus 107 ~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l 166 (624)
.||||+|+..|+.+++++|++.+.+.+. ++.+|.||||+|+..|+.+++++|++.+++.
T Consensus 71 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 129 (162)
T 1ihb_A 71 FAVIHDAARAGFLDTLQTLLEFQADVNI-EDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129 (162)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHccCCC
Confidence 9999999999999999999999999888 8999999999999999999999999987754
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=217.02 Aligned_cols=149 Identities=16% Similarity=0.124 Sum_probs=131.8
Q ss_pred cccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcc
Q 006942 21 LTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTN 100 (624)
Q Consensus 21 ~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~ 100 (624)
++.+ |..| +||||+||. .| +.++++.|++.+ .+++.+|..|.||||+|+..|+.+++++|++++++ ++
T Consensus 28 ~n~~-d~~g-~t~L~~A~~----~g---~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~ 95 (192)
T 2rfm_A 28 RNYR-DSYN-RTPLMVACM----LG---MENAIDKLVENF--DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VN 95 (192)
T ss_dssp HTCC-CTTC-CCHHHHHHH----HT---CGGGHHHHHHHH--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TT
T ss_pred HhCc-CCCC-CCHHHHHHH----cC---CHHHHHHHHHhc--cccccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CC
Confidence 4445 8899 999999999 99 999999999997 67889999999999999999999999999999988 78
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHH
Q 006942 101 IRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNT 180 (624)
Q Consensus 101 ~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~ 180 (624)
.+|..|.||||+|+..|+.+++++|++.+++.+. ++..|.||||+|+..|+.++++.|++.+.++ ..+|..|.||||+
T Consensus 96 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~ 173 (192)
T 2rfm_A 96 TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVND-RNLEGETPLIVASKYGRSEIVKKLLELGADI-SARDLTGLTAEAS 173 (192)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHH
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHH
Confidence 8999999999999999999999999999999988 8999999999999999999999999986654 3344444444444
Q ss_pred HHc
Q 006942 181 LAQ 183 (624)
Q Consensus 181 Aa~ 183 (624)
|+.
T Consensus 174 A~~ 176 (192)
T 2rfm_A 174 ARI 176 (192)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-29 Score=244.27 Aligned_cols=158 Identities=12% Similarity=0.107 Sum_probs=133.5
Q ss_pred HHHHHcCcc--ccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHH
Q 006942 11 EDFVTNHPD--ALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRAL 88 (624)
Q Consensus 11 ~~ll~~~~~--~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv 88 (624)
+.+|++... ..+.. +.+| .||||.||. .| +.++|+.|++.+ .+++.+|..|.||||+||..|+.+++
T Consensus 2 ~~ll~~~~~~~~~~~~-~~~~-~t~L~~A~~----~g---~~~~v~~Ll~~g--~~~~~~d~~g~tpLh~A~~~g~~~~v 70 (229)
T 2vge_A 2 RSVLRKAGSPRKARRA-RLNP-LVLLLDAAL----TG---ELEVVQQAVKEM--NDPSQPNEEGITALHNAICGANYSIV 70 (229)
T ss_dssp --------CCCCCCCT-TSCH-HHHHHHHHH----HT---CHHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred eehhccCCCCcccccc-ccch-hHHHHHHHH----cC---CHHHHHHHHhcC--CCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 456665433 23333 6778 999999999 99 999999999997 67899999999999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHHH--HHhCcHHHHHHHHHhCCC
Q 006942 89 KLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVLSFL--IAANLYDVALDLLKRHPT 165 (624)
Q Consensus 89 ~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~-~~G~t~Lh~A--~~~~~~~~v~~Ll~~~~~ 165 (624)
++|++.+++ ++.+|..|.||||+|+..|+.+++++|++.+++.+. .+ .+|.||||+| +..|+.+++++|++.+.+
T Consensus 71 ~~Ll~~ga~-~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~ 148 (229)
T 2vge_A 71 DFLITAGAN-VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFA-TTLSDGATAFEKCDPYREGYADCATYLADVEQS 148 (229)
T ss_dssp HHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-ccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC
Confidence 999999988 889999999999999999999999999999999887 54 7999999999 999999999999999876
Q ss_pred CCcccCCCCCCHHHHHH
Q 006942 166 IGRDSIDSRRIILNTLA 182 (624)
Q Consensus 166 l~~~~d~~G~TpLh~Aa 182 (624)
+ +.+|..|.||++.++
T Consensus 149 ~-~~~~~~~~~~l~~~~ 164 (229)
T 2vge_A 149 M-GLMNSGAVYALWDYS 164 (229)
T ss_dssp T-TTSGGGEEEESSCBC
T ss_pred c-ccccCCchHHHHHHh
Confidence 5 456777888877543
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=209.96 Aligned_cols=142 Identities=16% Similarity=0.171 Sum_probs=103.3
Q ss_pred CCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCC
Q 006942 28 PGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGF 107 (624)
Q Consensus 28 ~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~ 107 (624)
+| .||||.||. .| +.++++.|++.+ .+++.+|..|.||||+|+..|+.+++++|++++++ ++.+|..|.
T Consensus 2 ~~-~t~L~~A~~----~g---~~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~ 70 (167)
T 3v31_A 2 AN-SLSVHQLAA----QG---EMLYLATRIEQE--NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRE 70 (167)
T ss_dssp TT-CCCHHHHHH----TT---CHHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCC
T ss_pred CC-cchHHHHHH----CC---CHHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCC
Confidence 35 788888888 88 888888888775 55777788888888888888888888888887766 667777788
Q ss_pred hHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 006942 108 LPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLA 182 (624)
Q Consensus 108 TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa 182 (624)
||||+|+..|+.+++++|++.+.+.+. ++..|.||||+|+..|+.++++.|++.+.++ ..+|..|.||||+|+
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~ 143 (167)
T 3v31_A 71 SALSLACSKGYTDIVKMLLDCGVDVNE-YDWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDSGYNSMDLAV 143 (167)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHH
Confidence 888888888888888888887777766 6777777777777777777777777765443 233334444444333
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.3e-26 Score=208.10 Aligned_cols=157 Identities=19% Similarity=0.183 Sum_probs=142.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Q 006942 71 HGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAA 150 (624)
Q Consensus 71 ~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~ 150 (624)
.|.||||.||..|+.++++.|++.+++ ++.+|..|.||||+|+..|+.+++++|++.+.+.+. .+..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL-LGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHc
Confidence 588999999999999999999999877 888999999999999999999999999999998888 899999999999999
Q ss_pred CcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhh
Q 006942 151 NLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESF 230 (624)
Q Consensus 151 ~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (624)
|+.++++.|++.+.++ +.
T Consensus 80 ~~~~~v~~Ll~~g~~~-~~------------------------------------------------------------- 97 (167)
T 3v31_A 80 GYTDIVKMLLDCGVDV-NE------------------------------------------------------------- 97 (167)
T ss_dssp TCHHHHHHHHHHTCCT-TC-------------------------------------------------------------
T ss_pred CCHHHHHHHHHCCCCC-Cc-------------------------------------------------------------
Confidence 9999999999886543 11
Q ss_pred hhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCcc
Q 006942 231 IVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQ 310 (624)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~ 310 (624)
.+..
T Consensus 98 ----------------------------------------------------------------------------~~~~ 101 (167)
T 3v31_A 98 ----------------------------------------------------------------------------YDWN 101 (167)
T ss_dssp ----------------------------------------------------------------------------CCTT
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 3455
Q ss_pred ccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 311 LSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 311 g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
|.||||+|+..|+.++++.|+++ +++....|..|+||||+|+..|+.+++++|++++
T Consensus 102 g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 102 GGTPLLYAVHGNHVKCVKMLLES-GADPTIETDSGYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHH
Confidence 67888888888999999999999 9888766999999999999999999999999876
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-26 Score=207.67 Aligned_cols=156 Identities=24% Similarity=0.271 Sum_probs=139.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Q 006942 71 HGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAA 150 (624)
Q Consensus 71 ~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~ 150 (624)
...||||.|+..|+.++++.|++++++ ++.+|..|.||||+|+. |+.+++++|++.+.+.+. ++..|.||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL-KDRTGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCC-ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHc
Confidence 456999999999999999999999888 78899999999999999 999999999999999888 899999999999999
Q ss_pred CcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhh
Q 006942 151 NLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESF 230 (624)
Q Consensus 151 ~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (624)
|+.++++.|++.+.++ +.
T Consensus 81 ~~~~~v~~Ll~~g~~~-~~------------------------------------------------------------- 98 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADV-NI------------------------------------------------------------- 98 (162)
T ss_dssp TCHHHHHHHHHTTCCT-TC-------------------------------------------------------------
T ss_pred CCHHHHHHHHHcCCCC-CC-------------------------------------------------------------
Confidence 9999999999876543 11
Q ss_pred hhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCcc
Q 006942 231 IVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQ 310 (624)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~ 310 (624)
.+..
T Consensus 99 ----------------------------------------------------------------------------~~~~ 102 (162)
T 1ihb_A 99 ----------------------------------------------------------------------------EDNE 102 (162)
T ss_dssp ----------------------------------------------------------------------------CCTT
T ss_pred ----------------------------------------------------------------------------cCCC
Confidence 3445
Q ss_pred ccHHHHHHHHcCCHHHHHHHHHccCCCceec-CCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 311 LSVAMLAAAILGIPEVVNEFIMAYDSSSNWS-NQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 311 g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~-d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
|.||||+|+..|+.+++++|+++ +++.... |..|+||||+|+.+++.+++++|+++|
T Consensus 103 g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 103 GNLPLHLAAKEGHLRVVEFLVKH-TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHH-SCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 67888888888899999999999 9886556 999999999999999999999999887
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=207.04 Aligned_cols=160 Identities=21% Similarity=0.293 Sum_probs=141.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHH
Q 006942 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFL 147 (624)
Q Consensus 68 ~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A 147 (624)
....+.||||.||+.|+.++|++|++++++ ++.+|..|.||||+|+..|+.+++++|++.+.+.+. .+..|.||||+|
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A 87 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGAD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA-VDHAGMTPLRLA 87 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHH
Confidence 456678999999999999999999999988 788999999999999999999999999999998888 899999999999
Q ss_pred HHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcc
Q 006942 148 IAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDI 227 (624)
Q Consensus 148 ~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (624)
+..|+.+++++|++.+.++ +.
T Consensus 88 ~~~~~~~~~~~Ll~~g~~~-~~---------------------------------------------------------- 108 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGADV-NA---------------------------------------------------------- 108 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCT-TC----------------------------------------------------------
T ss_pred HHcCCHHHHHHHHHcCCCC-CC----------------------------------------------------------
Confidence 9999999999999875543 11
Q ss_pred hhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccC
Q 006942 228 ESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQN 307 (624)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~ 307 (624)
.
T Consensus 109 -------------------------------------------------------------------------------~ 109 (169)
T 2y1l_E 109 -------------------------------------------------------------------------------N 109 (169)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 3
Q ss_pred CccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 308 SAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 308 ~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
+..|.||||+|+..|+.+++++|+++ +++....|..|+||||+|+.+++.+++++|++.|
T Consensus 110 ~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 110 DMEGHTPLHLAAMFGHLEIVEVLLKN-GADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 45567888888888999999999999 9988766999999999999999999999999865
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=206.19 Aligned_cols=144 Identities=19% Similarity=0.209 Sum_probs=126.7
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
...+ .|+||.||+ .| +.++|++|++.+ .+++.+|..|.||||+|+..|+.+++++|++++++ ++.+|..
T Consensus 11 ~~~~-~~~l~~A~~----~g---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 79 (169)
T 2y1l_E 11 GSDL-GKKLLEAAR----AG---RDDEVRILMANG--ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHA 79 (169)
T ss_dssp --CH-HHHHHHHHH----HT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred CCcc-cchHHHHHH----cC---CHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCC
Confidence 4566 899999999 99 999999999997 67889999999999999999999999999999888 7889999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLA 182 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa 182 (624)
|.||||+|+..|+.+++++|++.+++.+. ++.+|.||||+|+..|+.+++++|++++.++ +.+|..|.||||+|+
T Consensus 80 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~ 154 (169)
T 2y1l_E 80 GMTPLRLAALFGHLEIVEVLLKNGADVNA-NDMEGHTPLHLAAMFGHLEIVEVLLKNGADV-NAQDKFGKTAFDISI 154 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHH
Confidence 99999999999999999999999999888 8999999999999999999999999986654 333444444444444
|
| >4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-26 Score=228.70 Aligned_cols=149 Identities=16% Similarity=0.176 Sum_probs=132.0
Q ss_pred ccCCCHHHHHHHHHcCcc-ccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 2 IEKNDWQGVEDFVTNHPD-ALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 2 a~~G~~~~v~~ll~~~~~-~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
+..|+.+.++.++..... .++.+ |.+| +||||+||. .| +.++|+.|++.+ ..+++.+|..|.||||+|+
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~n~~-d~~g-~T~Lh~A~~----~g---~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 84 LVRRHLVTFRAMSARLLDYVVNIA-DSNG-NTALHYSVS----HA---NFPVVQQLLDSG-VCKVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHTCC-CTTS-CCHHHHHHH----TT---CHHHHHHHHHTS-CCCTTCCCTTSCCHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHhhcCcCC-CCCC-CCHHHHHHH----CC---CHHHHHHHHHCC-CCcCCCCCCCCCCHHHHHH
Confidence 445667777777665333 25555 8999 999999999 99 999999999997 3478999999999999999
Q ss_pred -----HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHH
Q 006942 81 -----AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDV 155 (624)
Q Consensus 81 -----~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~ 155 (624)
..|+.++++.|++.+.. ....|..|.||||+|+..|+.+++++|++.+++++. +|.+|.||||+|+..|+.++
T Consensus 154 ~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~-~d~~G~TpLh~A~~~g~~~i 231 (276)
T 4hbd_A 154 LATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLACEADVNV-QDDDGSTALMCACEHGHKEI 231 (276)
T ss_dssp GCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHH
T ss_pred HHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHCCCHHH
Confidence 67999999999999876 677889999999999999999999999999999998 89999999999999999999
Q ss_pred HHHHHHh
Q 006942 156 ALDLLKR 162 (624)
Q Consensus 156 v~~Ll~~ 162 (624)
++.|++.
T Consensus 232 v~~Ll~~ 238 (276)
T 4hbd_A 232 AGLLLAV 238 (276)
T ss_dssp HHHHHTS
T ss_pred HHHHHhc
Confidence 9999983
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-28 Score=251.19 Aligned_cols=144 Identities=15% Similarity=0.068 Sum_probs=117.1
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCch-hhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCC--cccC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPE-TLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDL--TNIR 102 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~-~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l--~~~~ 102 (624)
+.++ +||||+||+ .| +.++|++|++.+.+. ..+..|..|.||||+||..|+.++|++|++++++. .+..
T Consensus 89 g~~~-~T~Lh~Aa~----~G---~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~ 160 (376)
T 2aja_A 89 GIKS-EVICFVAAI----TG---CSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQ 160 (376)
T ss_dssp TCCH-HHHHHHHHH----HC---CHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHS
T ss_pred CCCc-CCHHHHHHH----cC---CHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccC
Confidence 5677 899999999 99 999999999997432 12345667889999999999999999999999752 1233
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcCCCcc-ccCCCCCcHHHHHH-HhCcHHHHHHHHHhCCCCCcccCCCCCCHHHH
Q 006942 103 HGEGFLPVHDAALYGHKDTFHYLLEVTHGVDI-YSGKDGANVLSFLI-AANLYDVALDLLKRHPTIGRDSIDSRRIILNT 180 (624)
Q Consensus 103 n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~-~~~~~G~t~Lh~A~-~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~ 180 (624)
+.+ .||||+||..|+.++|++|++++++.+. ..+.+|.||||+|+ .+|+.+++++|++.+. .|.||||+
T Consensus 161 ~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~ 231 (376)
T 2aja_A 161 AEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIH 231 (376)
T ss_dssp HHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHC
T ss_pred CCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHH
Confidence 333 9999999999999999999999987543 14677999999999 9999999999998432 38899999
Q ss_pred HHcCCC
Q 006942 181 LAQKPY 186 (624)
Q Consensus 181 Aa~~~~ 186 (624)
|++.++
T Consensus 232 Aa~~g~ 237 (376)
T 2aja_A 232 EFEYGE 237 (376)
T ss_dssp TTTTTT
T ss_pred HHHCCC
Confidence 998753
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-25 Score=201.49 Aligned_cols=140 Identities=19% Similarity=0.171 Sum_probs=123.9
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPV 110 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPL 110 (624)
.||||.||. .| +.++++.|++. .+.+++.+|..|.||||+ |..|+.+++++|++++++ ++.+|..|.|||
T Consensus 3 ~~~L~~A~~----~g---~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 72 (156)
T 1bd8_A 3 GDRLSGAAA----RG---DVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPV 72 (156)
T ss_dssp HHHHHHHHH----HT---CHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred chHHHHHHH----hC---CHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHH
Confidence 799999999 99 99999999998 456889999999999999 999999999999999988 789999999999
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHc
Q 006942 111 HDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQ 183 (624)
Q Consensus 111 h~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~ 183 (624)
|+|+..|+.+++++|++.+.+.+. +|.+|.||||+|+..|+.++++.|++. .+. +.+|.+|.||||+|+.
T Consensus 73 ~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~-~~~~~~g~t~l~~A~~ 142 (156)
T 1bd8_A 73 HDAARTGFLDTLKVLVEHGADVNV-PDGTGALPIHLAVQEGHTAVVSFLAAE-SDL-HRRDARGLTPLELALQ 142 (156)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT-TCCCTTSCCHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHhChHHHHHHHHhc-cCC-CCcCCCCCCHHHHHHH
Confidence 999999999999999999999888 899999999999999999999999987 432 3444444444444443
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=205.72 Aligned_cols=161 Identities=20% Similarity=0.200 Sum_probs=140.4
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHH
Q 006942 67 RQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSF 146 (624)
Q Consensus 67 ~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~ 146 (624)
..|.+|.||||.|+..|+.++++.|++.++......+..|.||||+|+..|+.+++++|++.+.+.+. ++.+|.||||+
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~ 81 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA-KDKGGLVPLHN 81 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHH
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCc-cCCCCCCHHHH
Confidence 35778999999999999999999999987766788899999999999999999999999999999888 89999999999
Q ss_pred HHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCc
Q 006942 147 LIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGD 226 (624)
Q Consensus 147 A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (624)
|+..|+.+++++|++.+.++ +.
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~-~~--------------------------------------------------------- 103 (165)
T 3twr_A 82 ACSYGHYEVAELLVKHGAVV-NV--------------------------------------------------------- 103 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TC---------------------------------------------------------
T ss_pred HHHcCcHHHHHHHHhCCCCC-CC---------------------------------------------------------
Confidence 99999999999999875543 11
Q ss_pred chhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhccccccc
Q 006942 227 IESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQ 306 (624)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~ 306 (624)
T Consensus 104 -------------------------------------------------------------------------------- 103 (165)
T 3twr_A 104 -------------------------------------------------------------------------------- 103 (165)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 307 NSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 307 ~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
.+..|.||||+|+..|+.+++++|+++ +++....|..|+||||+|+. ++.+++++|++.+
T Consensus 104 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 104 ADLWKFTPLHEAAAKGKYEICKLLLQH-GADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence 344567888888888999999999999 98887679999999999877 8899999999876
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=207.74 Aligned_cols=169 Identities=16% Similarity=0.163 Sum_probs=146.5
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHH
Q 006942 70 NHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIA 149 (624)
Q Consensus 70 ~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~ 149 (624)
.++.||||.||..|+.++++.|++.++..++.+|..|.||||+||..|+.+++++|++.+.+.+. .+..|.||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV-MNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHH
Confidence 46789999999999999999999997777889999999999999999999999999999999888 89999999999999
Q ss_pred hCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchh
Q 006942 150 ANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIES 229 (624)
Q Consensus 150 ~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (624)
.|+.++++.|++.+.++ +.
T Consensus 82 ~~~~~~v~~Ll~~g~~~-~~------------------------------------------------------------ 100 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADI-NA------------------------------------------------------------ 100 (179)
T ss_dssp TTCHHHHHHHHHTTCCT-TC------------------------------------------------------------
T ss_pred cCCHHHHHHHHHcCCCC-Cc------------------------------------------------------------
Confidence 99999999999876543 11
Q ss_pred hhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCc
Q 006942 230 FIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSA 309 (624)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~ 309 (624)
.+.
T Consensus 101 -----------------------------------------------------------------------------~d~ 103 (179)
T 3f6q_A 101 -----------------------------------------------------------------------------VNE 103 (179)
T ss_dssp -----------------------------------------------------------------------------CCT
T ss_pred -----------------------------------------------------------------------------cCC
Confidence 345
Q ss_pred cccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCC
Q 006942 310 QLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAG 381 (624)
Q Consensus 310 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~G 381 (624)
.|.||||+|+..|+.++++.|+++ +++....|..|+||||+|+..++.+++++|++.+ ..++..+.++
T Consensus 104 ~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g---~~~~~~~~~~ 171 (179)
T 3f6q_A 104 HGNVPLHYACFWGQDQVAEDLVAN-GALVSICNKYGEMPVDKAKAPLRELLRERAEKMG---QNLNRIPYKD 171 (179)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHT-TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTT---CCCSCBCCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC-CCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhh---cCcccCCccc
Confidence 567888888888899999999999 9888766999999999999999999999999998 4455665544
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-27 Score=249.15 Aligned_cols=258 Identities=14% Similarity=0.039 Sum_probs=175.8
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCC--CcccCCCCCCh
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPD--LTNIRHGEGFL 108 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~--l~~~~n~~G~T 108 (624)
.++++.|+. +.+ +.+++++|++.+ .+++||||+||+.|+.++|++|+++++. .....|..|.|
T Consensus 66 ll~~~~a~~---~~~---~~~~~~~l~~~g---------~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~t 130 (376)
T 2aja_A 66 LLCLYYAHY---NRN---AKQLWSDAHKKG---------IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQ 130 (376)
T ss_dssp HHHHHHHHT---TTT---CTTHHHHHHHHT---------CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHH
T ss_pred HHHHHHHHh---cCC---CHHHHHHHHHcC---------CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCC
Confidence 567777766 135 678888888775 2345999999999999999999999762 12345667899
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCCC---ccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCc-ccCCCCCCHHHHHH-c
Q 006942 109 PVHDAALYGHKDTFHYLLEVTHGV---DIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGR-DSIDSRRIILNTLA-Q 183 (624)
Q Consensus 109 PLh~Aa~~g~~~iv~~Ll~~~~~~---~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~-~~d~~G~TpLh~Aa-~ 183 (624)
|||+||.+|+.++|++|++++++. +. .+.+ .||||+|+.+|+.+++++|++++++... ..|.+|.||||+|+ +
T Consensus 131 pL~~Aa~~G~~eiv~~Ll~~gad~~~~~i-~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~ 208 (376)
T 2aja_A 131 AFRLAAENGHLHVLNRLCELAPTEIMAMI-QAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVG 208 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCTTTHHHHH-SHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCcccccc-CCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHH
Confidence 999999999999999999999752 22 2233 9999999999999999999999886532 26788999999999 8
Q ss_pred CCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHH
Q 006942 184 KPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHR 263 (624)
Q Consensus 184 ~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (624)
.|+
T Consensus 209 ~G~----------------------------------------------------------------------------- 211 (376)
T 2aja_A 209 RGH----------------------------------------------------------------------------- 211 (376)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 752
Q ss_pred HhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCC
Q 006942 264 MLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQ 343 (624)
Q Consensus 264 ~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~ 343 (624)
.+.+++| .+. ...|.||||.|+.+|+.+++++|++. +++....|
T Consensus 212 -----------------------~eiv~~L---l~~--------ga~~~taL~~Aa~~g~~evv~lL~~~-ga~~~~~~- 255 (376)
T 2aja_A 212 -----------------------HNVINFL---LDC--------PVMLAYAEIHEFEYGEKYVNPFIARH-VNRLKEMH- 255 (376)
T ss_dssp -----------------------HHHHHHH---TTS--------HHHHHHHHHCTTTTTTTTHHHHHHHH-HHHHHHHH-
T ss_pred -----------------------HHHHHHH---HhC--------CCccchHHHHHHHCCCHHHHHHHHhc-Cccccccc-
Confidence 1133332 221 22378999999999999999999998 76654332
Q ss_pred CCCcHHHHHHHcCChh---------------------------HHHHHhcCCcccccc--ccccCCCCchhhhhhhcCCC
Q 006942 344 DGHTIFDHAVLYRREK---------------------------VFNLIQGVNFTTFLF--SSRDKAGNNILHLAGRLVPS 394 (624)
Q Consensus 344 ~G~T~Lh~A~~~~~~~---------------------------iv~~Ll~~~~~~~~v--n~~D~~GnTpLHlAa~~~~~ 394 (624)
++++.|+.+|+.+ .+++|++.+....++ ...++.++||||+|++.|+.
T Consensus 256 ---~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~ 332 (376)
T 2aja_A 256 ---DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQ 332 (376)
T ss_dssp ---TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCT
T ss_pred ---HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcH
Confidence 2445555555444 444555443111111 24456789999999999997
Q ss_pred CCccchHHHhHHHHhHHHHHHhhcCcccccccCCCCCChhhhhhHH
Q 006942 395 SEVAGAALQMQRELQWFKAIENLVHPFFREATNDLKQTPREVFTEE 440 (624)
Q Consensus 395 ~~~~gaalq~~~~l~~~~~v~~~~~~~~~~~~N~~G~Tp~dl~~~~ 440 (624)
+ .|+-+++ ...+++..|+||++.++..
T Consensus 333 e-----------------~v~lLl~--~~~v~~~~~~~~~~~~~~~ 359 (376)
T 2aja_A 333 G-----------------ACALLLS--IPSVLALTKANNYYINETG 359 (376)
T ss_dssp T-----------------HHHHHTT--SHHHHHSCC----------
T ss_pred H-----------------HHHHHHc--ChHHHHHHHHhcccccccc
Confidence 6 2444443 2466788899999887654
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B | Back alignment and structure |
|---|
Probab=99.93 E-value=4e-25 Score=201.03 Aligned_cols=147 Identities=22% Similarity=0.245 Sum_probs=136.7
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|+..|+.+.++.++++.+..++.. +..| +||||+ |. .| +.++++.|++.+ .+++.+|..|.||||+|+
T Consensus 9 A~~~g~~~~v~~ll~~~~~~~~~~-~~~g-~t~L~~-~~----~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 76 (156)
T 1bd8_A 9 AAARGDVQEVRRLLHRELVHPDAL-NRFG-KTALQV-MM----FG---STAIALELLKQG--ASPNVQDTSGTSPVHDAA 76 (156)
T ss_dssp HHHHTCHHHHHHHHHTTCCCTTCC-CTTS-CCHHHH-SC----TT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHH
T ss_pred HHHhCCHHHHHHHHHhhCcCcccc-CCCC-CcHHHH-HH----cC---CHHHHHHHHHCC--CCCCCcCCCCCCHHHHHH
Confidence 678999999999999955566666 8899 999999 99 99 999999999997 678999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLL 160 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll 160 (624)
..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++. .+.+. +|.+|.||||+|+..|+.++++.|+
T Consensus 77 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~-~~~~g~t~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 77 RTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR-RDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp HTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC-CCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred HcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC-cCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 99999999999999988 888999999999999999999999999999 77777 8999999999999999999999998
Q ss_pred Hh
Q 006942 161 KR 162 (624)
Q Consensus 161 ~~ 162 (624)
++
T Consensus 154 ~~ 155 (156)
T 1bd8_A 154 GH 155 (156)
T ss_dssp TT
T ss_pred hh
Confidence 75
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-25 Score=206.99 Aligned_cols=154 Identities=17% Similarity=0.197 Sum_probs=133.0
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|+..|+.+.++.++++.+..++.+ +..| .||||+||. .| +.+++++|++.+ .+++.+|..|.||||+|+
T Consensus 12 A~~~g~~~~v~~ll~~~~~~~~~~-~~~g-~t~L~~A~~----~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 12 QCREGNAVAVRLWLDNTENDLNQG-DDHG-FSPLHWACR----EG---RSAVVEMLIMRG--ARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp HHHHTCHHHHHHHHHCTTSCTTCC-CTTS-CCHHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHhcCccccccc-CCCC-CCHHHHHHH----cC---cHHHHHHHHHcC--CCCCCcCCCCCCHHHHHH
Confidence 567888999998888877777766 8888 899999999 89 899999999886 677888888999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLL 160 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll 160 (624)
..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++++++.+. ++..|.||||+|+..++.++++.|+
T Consensus 81 ~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI-CNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB-CCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch-hccCCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999988887 778888899999999999999999999998888887 8888999999998888888898888
Q ss_pred HhCCCCC
Q 006942 161 KRHPTIG 167 (624)
Q Consensus 161 ~~~~~l~ 167 (624)
+.+.++.
T Consensus 159 ~~g~~~~ 165 (179)
T 3f6q_A 159 KMGQNLN 165 (179)
T ss_dssp HTTCCCS
T ss_pred HhhcCcc
Confidence 8877664
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B | Back alignment and structure |
|---|
Probab=99.92 E-value=9.2e-27 Score=228.04 Aligned_cols=141 Identities=13% Similarity=0.104 Sum_probs=97.5
Q ss_pred CCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCC
Q 006942 27 EPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEG 106 (624)
Q Consensus 27 ~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G 106 (624)
..| .||||.|++ .| +.+.++.|++++ .+++. +..|.||||.|+..|+.++|+.|++.+++ ++.+|..|
T Consensus 3 ~~g-~t~L~~a~~----~~---~~~~~~~ll~~g--~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g 70 (239)
T 1ycs_B 3 ITG-QVSLPPGKR----TN---LRKTGSERIAHG--MRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEG 70 (239)
T ss_dssp ---------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTS
T ss_pred ccc-cccCchhhh----hh---hHHHHHHHhccC--CCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCC
Confidence 467 999999999 99 999999999998 45553 47889999999999999999999999987 88999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCC-CCHHHHH
Q 006942 107 FLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSR-RIILNTL 181 (624)
Q Consensus 107 ~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G-~TpLh~A 181 (624)
.||||+||..|+.+++++|++++++.+. +|.+|+||||+|+..|+.++++.|++++.++. .+|..| .||||+|
T Consensus 71 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 71 ITALHNAVCAGHTEIVKFLVQFGVNVNA-ADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDMQTAADKC 144 (239)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSCCCHHHHC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-eecCCCCcchHHHH
Confidence 9999999999999999999999999988 89999999999999999999999999988764 344443 4777766
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-25 Score=198.10 Aligned_cols=143 Identities=16% Similarity=0.126 Sum_probs=132.7
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPV 110 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPL 110 (624)
.||||.|+. .| +.++|+.|++.+. +++ .|..|.||||+|+..|+.+++++|++.+++ ++.+|..|.|||
T Consensus 3 ~~~L~~A~~----~g---~~~~v~~Ll~~g~--~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 71 (153)
T 1awc_B 3 GKKLLEAAR----AG---QDDEVRILMANGA--PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPL 71 (153)
T ss_dssp HHHHHHHHH----HT---CHHHHHHHHHHTC--CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHH
T ss_pred cHHHHHHHH----cC---CHHHHHHHHHcCC--CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHH
Confidence 699999999 99 9999999999974 333 588999999999999999999999999888 788999999999
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCC
Q 006942 111 HDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPY 186 (624)
Q Consensus 111 h~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~ 186 (624)
|+|+..|+.+++++|++++++.+. ++..|.||||+|+..|+.++++.|++.+.++ +.+|.+|.||||+|+..++
T Consensus 72 ~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 72 HMAASEGHANIVEVLLKHGADVNA-KDMLKMTALHWATEHNHQEVVELLIKYGADV-HTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHcChHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCC
Confidence 999999999999999999999888 8999999999999999999999999998765 6689999999999998753
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.3e-25 Score=198.05 Aligned_cols=144 Identities=15% Similarity=0.123 Sum_probs=134.1
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|+..|+.+.++.+++...... . +..| .||||+|+. .| +.+++++|++.+ .+++.+|..|.||||+|+
T Consensus 9 A~~~g~~~~v~~Ll~~g~~~~--~-~~~g-~t~L~~A~~----~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 75 (153)
T 1awc_B 9 AARAGQDDEVRILMANGAPFT--T-DWLG-TSPLHLAAQ----YG---HFSTTEVLLRAG--VSRDARTKVDRTPLHMAA 75 (153)
T ss_dssp HHHHTCHHHHHHHHHHTCCCC--C-CTTC-CCHHHHHHH----HT---CHHHHHHHHTTT--CCTTCCCTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCC--c-CCCC-CCHHHHHHH----cC---CHHHHHHHHHcC--CCCCCCCCCCCCHHHHHH
Confidence 678999999999999876432 3 7789 999999999 99 999999999987 678899999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDL 159 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~L 159 (624)
..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++++++.+. ++..|.||||+|+..|+.+++++|
T Consensus 76 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 76 SEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT-QSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999988 788999999999999999999999999999999888 899999999999999999999876
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-25 Score=203.92 Aligned_cols=146 Identities=15% Similarity=0.183 Sum_probs=128.9
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
+++| +||||.|++ .| +.++++.|++.. +.+.+..+..|.||||+|+..|+.+++++|++++++ ++.+|..
T Consensus 5 ~~~~-~~~l~~A~~----~g---~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 74 (165)
T 3twr_A 5 NSEA-DRQLLEAAK----AG---DVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKG 74 (165)
T ss_dssp -CHH-HHHHHHHHH----HT---CHHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred cchh-hHHHHHHHH----hC---CHHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCC
Confidence 5677 899999999 99 999999999875 466778888899999999999999999999999887 7788899
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHc
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQ 183 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~ 183 (624)
|.||||+|+..|+.+++++|++.+.+.+. +|..|.||||+|+..|+.++++.|++.+.+. +.+|.+|.||||+|++
T Consensus 75 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 75 GLVPLHNACSYGHYEVAELLVKHGAVVNV-ADLWKFTPLHEAAAKGKYEICKLLLQHGADP-TKKNRDGNTPLDLVKD 150 (165)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCTGGGSCT
T ss_pred CCCHHHHHHHcCcHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCChhHhHhc
Confidence 99999999999999999999999988888 8899999999999999999999999987664 6788899999999765
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-25 Score=217.13 Aligned_cols=184 Identities=10% Similarity=0.039 Sum_probs=126.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q 006942 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLI 148 (624)
Q Consensus 69 d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~ 148 (624)
+..|.||||.|++.|+.+.++.|++++.+ ++. +..|.||||.|+..|+.+++++|++.+++.+. +|.+|.||||+|+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~-~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMR-VKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL-PNDEGITALHNAV 78 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCC-CCTTSCCHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCC-ccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHH
Confidence 34689999999999999999999999887 443 46789999999999999999999999998888 8999999999999
Q ss_pred HhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcch
Q 006942 149 AANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIE 228 (624)
Q Consensus 149 ~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (624)
..|+.++++.|++.+.++ +.
T Consensus 79 ~~g~~~~v~~Ll~~ga~~-~~----------------------------------------------------------- 98 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVNV-NA----------------------------------------------------------- 98 (239)
T ss_dssp HHTCHHHHHHHHHHTCCT-TC-----------------------------------------------------------
T ss_pred HcCCHHHHHHHHHcCCCC-Cc-----------------------------------------------------------
Confidence 999999999999986543 21
Q ss_pred hhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCC
Q 006942 229 SFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNS 308 (624)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~ 308 (624)
.+
T Consensus 99 ------------------------------------------------------------------------------~d 100 (239)
T 1ycs_B 99 ------------------------------------------------------------------------------AD 100 (239)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------cC
Confidence 34
Q ss_pred ccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCC-cHHHHH--HHcCChhHHHHHhcCC-cccc-----ccccccC
Q 006942 309 AQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGH-TIFDHA--VLYRREKVFNLIQGVN-FTTF-----LFSSRDK 379 (624)
Q Consensus 309 ~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~-T~Lh~A--~~~~~~~iv~~Ll~~~-~~~~-----~vn~~D~ 379 (624)
..|.||||+|+..|+.+++++|+++ ++++...|..|. ||||+| +..|+.+++++|++.+ +.+. .....|.
T Consensus 101 ~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~ 179 (239)
T 1ycs_B 101 SDGWTPLHCAASCNNVQVCKFLVES-GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDY 179 (239)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCB
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHc-CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEecc
Confidence 4567788888888899999999999 999987765555 999999 8889999999999887 3321 1223488
Q ss_pred CCCchhhhhhhcCCC
Q 006942 380 AGNNILHLAGRLVPS 394 (624)
Q Consensus 380 ~GnTpLHlAa~~~~~ 394 (624)
.|.|++|++.+.|..
T Consensus 180 ~~~~~~eLa~~~G~~ 194 (239)
T 1ycs_B 180 EPQNDDELPMKEGDC 194 (239)
T ss_dssp CCSSTTBCCBCSSCE
T ss_pred CCCCCCcccccCCCE
Confidence 899999999998873
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-24 Score=189.41 Aligned_cols=131 Identities=16% Similarity=0.104 Sum_probs=122.8
Q ss_pred ccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCc
Q 006942 20 ALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLT 99 (624)
Q Consensus 20 ~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~ 99 (624)
.++.. +..| .||||+|+. .| +.+++++|++.+ .+++.+|..|.||||+|+. |+.+++++|++++++ +
T Consensus 4 ~~~~~-~~~g-~t~L~~A~~----~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~ 70 (136)
T 1d9s_A 4 GIHML-GGSS-DAGLATAAA----RG---QVETVRQLLEAG--ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-P 70 (136)
T ss_dssp CCSCC-CCCC-SCHHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-S
T ss_pred CccCC-CCCC-ccHHHHHHH----cC---CHHHHHHHHHcC--CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-C
Confidence 34455 8899 999999999 99 999999999997 7789999999999999999 999999999999998 8
Q ss_pred ccCCCC-CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCC
Q 006942 100 NIRHGE-GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHP 164 (624)
Q Consensus 100 ~~~n~~-G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~ 164 (624)
+.+|.. |.||||+|+..|+.+++++|++.+++.+. +|..|.||||+|+..++.++++.|++++.
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 71 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV-CDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCC-CSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 889999 99999999999999999999999999888 89999999999999999999999998764
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.8e-24 Score=193.49 Aligned_cols=143 Identities=20% Similarity=0.155 Sum_probs=118.7
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
+..| .||||+||. .| +.++|++|++.+ .+++.+|..|.||||+|+ .|+.+++++|++++++ ++.+|..
T Consensus 9 ~~~~-~t~L~~A~~----~g---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~ 76 (156)
T 1bi7_B 9 MEPS-ADWLATAAA----RG---RVEEVRALLEAG--ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPA 76 (156)
T ss_dssp -CCS-TTHHHHHHH----HT---CHHHHHHHHTTT--CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTT
T ss_pred Cccc-hHHHHHHHH----cC---CHHHHHHHHHcC--CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCC
Confidence 6788 999999999 99 999999999997 678999999999999985 9999999999999988 8899999
Q ss_pred CCh-HHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 006942 106 GFL-PVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLA 182 (624)
Q Consensus 106 G~T-PLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa 182 (624)
|.| |||+|+..|+.+++++|++++++.+. ++.+|.||||+|+..|+.+++++|++++.+. ..+|..|.||.+-+.
T Consensus 77 g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDV-RDAWGRLPVDLAEELGHRDVARYLRAAAGGT-RGSNHARIDAAEGPS 152 (156)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHSSCC-------------------
T ss_pred CCcHHHHHHHHCCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC-CccCcCcCcccccCC
Confidence 999 99999999999999999999999988 8999999999999999999999999988775 667889999987543
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C | Back alignment and structure |
|---|
Probab=99.89 E-value=5.3e-23 Score=182.46 Aligned_cols=125 Identities=25% Similarity=0.230 Sum_probs=118.2
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
...| .||||.||. .| +.++|+.|++.+ .+++.+|..|.||||+|+..|+.+++++|++++++ ++.+|..
T Consensus 11 ~~~~-~t~l~~A~~----~g---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~ 79 (136)
T 2jab_A 11 GSDL-GKKLLEAAR----AG---QDDEVRILMANG--ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAI 79 (136)
T ss_dssp -CHH-HHHHHHHHH----HT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred cccc-cHHHHHHHH----hC---CHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCC
Confidence 4567 999999999 99 999999999997 67899999999999999999999999999999988 7889999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHh
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKR 162 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~ 162 (624)
|.||||+|+..|+.+++++|++++++.+. +|.+|.||||+|+..|+.++++.|++.
T Consensus 80 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 80 GFTPLHLAAFIGHLEIAEVLLKHGADVNA-QDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCcC-cCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 99999999999999999999999999888 899999999999999999999999875
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=175.96 Aligned_cols=125 Identities=26% Similarity=0.372 Sum_probs=118.8
Q ss_pred CCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCC
Q 006942 28 PGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGF 107 (624)
Q Consensus 28 ~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~ 107 (624)
+| +||||.|+. .| +.+++++|++.+ .+++.+|..|.||||+|+..|+.+++++|++.+++ ++.+|..|.
T Consensus 1 ~g-~t~L~~A~~----~~---~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~ 69 (126)
T 1n0r_A 1 NG-RTPLHLAAR----NG---HLEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGR 69 (126)
T ss_dssp CC-CCHHHHHHH----HT---CHHHHHHHHHHT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSC
T ss_pred CC-ccHHHHHHH----cC---cHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCC
Confidence 47 999999999 99 999999999996 67888999999999999999999999999999888 788999999
Q ss_pred hHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCC
Q 006942 108 LPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHP 164 (624)
Q Consensus 108 TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~ 164 (624)
||||+|+..|+.+++++|++++.+.+. ++.+|.||||+|+..|+.+++++|++++.
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 70 TPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 999999999999999999999999888 89999999999999999999999999865
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.7e-24 Score=198.00 Aligned_cols=147 Identities=10% Similarity=-0.010 Sum_probs=121.7
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchH----HHHHHHHHccCchhhccCCCCCChHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAI----CLLDKLASKVDPETLARQDNHGHTAA 76 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~----~iv~~Ll~~~~~~~~~~~d~~G~TpL 76 (624)
||+.|+.+.++.++..+....+ +..| +||||+|+. .| +. +++++|++.| ++++.+|.+|.|||
T Consensus 13 Aa~~g~~~~~~~l~~~~~~~~~---~~~g-~T~Lh~A~~----~~---~~~~~~~iv~~Ll~~G--advn~~d~~g~TpL 79 (186)
T 3t8k_A 13 AAMLGTYEDFLELFEKGYEDKE---SVLK-SNILYDVLR----NN---NDEARYKISMFLINKG--ADIKSRTKEGTTLF 79 (186)
T ss_dssp HHHHSCHHHHHHHHHHSSSCHH---HHHT-TTHHHHHTT----CS---CHHHHHHHHHHHHHTT--CCSSCCCTTCCCTH
T ss_pred HHHcCCHHHHHHHHhcCccccc---ccCC-CCHHHHHHH----cC---CcchHHHHHHHHHHCC--CCCCCCCCCCCcHH
Confidence 5778999999888887654321 2568 899999998 88 64 5899999987 77888899999999
Q ss_pred HHHHHcCC------HHHHHHHHhcCCCCcccCCCCCC-hHHHHHHHcC-----CHHHHHHHHH-hcCCCccccCCCCCcH
Q 006942 77 TLSAAKGN------LRALKLLVKYNPDLTNIRHGEGF-LPVHDAALYG-----HKDTFHYLLE-VTHGVDIYSGKDGANV 143 (624)
Q Consensus 77 h~Aa~~g~------~~iv~~Ll~~~~~l~~~~n~~G~-TPLh~Aa~~g-----~~~iv~~Ll~-~~~~~~~~~~~~G~t~ 143 (624)
|+|+..|+ .+++++|++++++ ++.+|..|. ||||+|+..+ +.+++++|++ .+++.+. +|..|.||
T Consensus 80 h~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~-~d~~G~Tp 157 (186)
T 3t8k_A 80 FPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI-KDKWGLTA 157 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC-CCTTSCCH
T ss_pred HHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc-cCCCCCCH
Confidence 99998887 6789999999888 888888998 9999998844 3568899998 8888888 89999999
Q ss_pred HHHHHHhCcHHHHHHHHHh
Q 006942 144 LSFLIAANLYDVALDLLKR 162 (624)
Q Consensus 144 Lh~A~~~~~~~~v~~Ll~~ 162 (624)
||+|+..|+.++++.|.+.
T Consensus 158 L~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 158 LEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp HHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHH
Confidence 9999999999888888765
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-23 Score=193.35 Aligned_cols=108 Identities=9% Similarity=0.083 Sum_probs=95.8
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCcccCC-CCCChHHHHHHHcCCH----HHHHHHHHhcCCCccccCCCCCcHHHH
Q 006942 72 GHTAATLSAAKGNLRALKLLVKYNPDLTNIRH-GEGFLPVHDAALYGHK----DTFHYLLEVTHGVDIYSGKDGANVLSF 146 (624)
Q Consensus 72 G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n-~~G~TPLh~Aa~~g~~----~iv~~Ll~~~~~~~~~~~~~G~t~Lh~ 146 (624)
+.++||.|++.|+.+.++.+++.+++ .++ ..|.||||+|+.+|+. +++++|++.|++++. ++.+|+||||+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~---~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~TpLh~ 81 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE---DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS-RTKEGTTLFFP 81 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS---CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC-CCTTCCCTHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc---cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC-CCCCCCcHHHH
Confidence 56899999999999999999998876 444 7799999999999985 599999999999999 89999999999
Q ss_pred HHHhCc------HHHHHHHHHhCCCCCcccCCCCC-CHHHHHHcC
Q 006942 147 LIAANL------YDVALDLLKRHPTIGRDSIDSRR-IILNTLAQK 184 (624)
Q Consensus 147 A~~~~~------~~~v~~Ll~~~~~l~~~~d~~G~-TpLh~Aa~~ 184 (624)
|+..++ .++++.|++++.++ +.+|..|. ||||+|+..
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~ 125 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNY 125 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGC
T ss_pred HHHcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHc
Confidence 999987 57899999998776 67888999 999988864
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-22 Score=178.08 Aligned_cols=101 Identities=13% Similarity=0.143 Sum_probs=94.6
Q ss_pred hhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCC-CC
Q 006942 63 ETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKD-GA 141 (624)
Q Consensus 63 ~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~-G~ 141 (624)
.+++.+|..|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+. |+.+++++|++.+++.+. ++.. |.
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~~g~ 79 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC-ADPATLT 79 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC-CBTTTTB
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC-cCCCCCC
Confidence 56789999999999999999999999999999887 78899999999999999 999999999999999888 8888 99
Q ss_pred cHHHHHHHhCcHHHHHHHHHhCCCC
Q 006942 142 NVLSFLIAANLYDVALDLLKRHPTI 166 (624)
Q Consensus 142 t~Lh~A~~~~~~~~v~~Ll~~~~~l 166 (624)
||||+|+..|+.++++.|++.+.++
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~ 104 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARL 104 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999886653
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A | Back alignment and structure |
|---|
Probab=99.87 E-value=9.4e-24 Score=207.21 Aligned_cols=141 Identities=14% Similarity=0.048 Sum_probs=118.5
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
...+ .+++.+++. .| +.+.+..+.... . ..+.+|.||||+||..|+.++++.|++ +.+ ++.+|..
T Consensus 12 ~~~~-~~~~l~~~~----~g---~~~~~~~~~~~~--~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~ 76 (244)
T 3ui2_A 12 AGEG-AMEYLIEWK----DG---HSPSWVPSSYIA--A---DVVSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDEN 76 (244)
T ss_dssp ETTT-EEEEEEEES----SC---CCCEEEEGGGSC--H---HHHHHHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTT
T ss_pred cCCC-ccHHHHHHH----cC---CCcccccccccc--c---ccccCCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCC
Confidence 3456 777777777 77 665555444432 2 234678999999999999999999999 666 7889999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHc
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQ 183 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~-~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~ 183 (624)
|.||||+||..|+.+++++|++++++.+. ++ ..|.||||+|+..|+.++++.|++.+.++ +.+|..|.||||+|++
T Consensus 77 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 77 GRTALLFVAGLGSDKCVRLLAEAGADLDH-RDMRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELARE 153 (244)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHTTCCTTC-CCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCc-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHH
Confidence 99999999999999999999999999887 66 88999999999999999999999997765 5678899999999884
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-22 Score=181.88 Aligned_cols=93 Identities=13% Similarity=0.121 Sum_probs=47.5
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCc-HHH
Q 006942 67 RQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGAN-VLS 145 (624)
Q Consensus 67 ~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t-~Lh 145 (624)
..+..|.||||+|+..|+.++|++|++++++ ++.+|..|.||||+|+ .|+.+++++|++.+.+.+. ++..|.| |||
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~-~d~~g~ttpL~ 83 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC-ADPATLTRPVH 83 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC-CCTTTCCCHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC-cCCCCCcHHHH
Confidence 3445555555555555555555555555554 4455555555555553 5555555555555554444 4444444 444
Q ss_pred HHHHhCcHHHHHHHHHh
Q 006942 146 FLIAANLYDVALDLLKR 162 (624)
Q Consensus 146 ~A~~~~~~~~v~~Ll~~ 162 (624)
+|+..|+.+++++|+++
T Consensus 84 ~A~~~~~~~~v~~Ll~~ 100 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRA 100 (156)
T ss_dssp HHHHHTCHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHc
Confidence 44444444444444443
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-22 Score=179.61 Aligned_cols=126 Identities=21% Similarity=0.216 Sum_probs=115.2
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
+.+| +||||+||. .| +.+++++|++.+ .+++.+|..|.||||+|+..|+.+++++|++++++ ++.+|..
T Consensus 7 ~~~g-~t~L~~A~~----~~---~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~ 75 (137)
T 3c5r_A 7 NHRG-ETLLHIASI----KG---DIPSVEYLLQNG--SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQ 75 (137)
T ss_dssp CTTC-CCHHHHHHH----HT---CHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGG
T ss_pred CCCC-CCHHHHHHH----cC---CHHHHHHHHHcC--CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCC
Confidence 7889 999999999 99 999999999997 67889999999999999999999999999999888 7889999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhC
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRH 163 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~ 163 (624)
|.||||+|+..|+.+++++|++.+++.+. +|.+|.||||+|+..+..++++.+.+..
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYGASRNA-VNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 99999999999999999999999999888 8999999999999998888877666543
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6.6e-22 Score=172.06 Aligned_cols=117 Identities=18% Similarity=0.191 Sum_probs=105.2
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
+..| +||||.|+. .| +.++++.|++.+ .+++.+|..|.||||+||..|+.+++++|++++++ ++.+|..
T Consensus 4 ~~~~-~~~l~~A~~----~~---~~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~ 72 (123)
T 3aaa_C 4 GSMC-DKEFMWALK----NG---DLDEVKDYVAKG--EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKH 72 (123)
T ss_dssp ---C-HHHHHHHHH----TT---CHHHHHHHHHTT--CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTT
T ss_pred cccc-chHHHHHHH----cC---CHHHHHHHHHcC--CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCC
Confidence 5678 999999999 99 999999999987 67889999999999999999999999999999988 8889999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHH
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYD 154 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~ 154 (624)
|.||||+|+..|+.+++++|++++++.+. +|.+|.||||+|...+..+
T Consensus 73 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 73 HITPLLSAVYEGHVSCVKLLLSKGADKTV-KGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHhCCHHHHH
Confidence 99999999999999999999999999888 8999999999995544333
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6.5e-22 Score=185.05 Aligned_cols=113 Identities=17% Similarity=0.098 Sum_probs=104.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHH
Q 006942 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSG-KDGANVLSF 146 (624)
Q Consensus 68 ~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~-~~G~t~Lh~ 146 (624)
.+.+|.||||.|+..|+.++++.|++ +.+ ++.+|..|.||||+|+..|+.+++++|++.+++.+. ++ .+|+||||+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~~g~tpL~~ 116 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH-RDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCSSSSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCCHHHH
Confidence 35689999999999999999999999 666 788999999999999999999999999999999887 66 899999999
Q ss_pred HHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 147 LIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 147 A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
|+..|+.++++.|++.+.++ +.+|.+|.||||+|++.
T Consensus 117 A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGADI-EVEDERGLTALELAREI 153 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHh
Confidence 99999999999999998775 67899999999999854
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=162.76 Aligned_cols=93 Identities=30% Similarity=0.422 Sum_probs=87.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Q 006942 71 HGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAA 150 (624)
Q Consensus 71 ~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~ 150 (624)
+|.||||+|+..|+.++++.|++++++ ++.+|..|.||||+|+..|+.+++++|++.+.+.+. ++..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHHc
Confidence 589999999999999999999999888 778899999999999999999999999999998888 899999999999999
Q ss_pred CcHHHHHHHHHhCCC
Q 006942 151 NLYDVALDLLKRHPT 165 (624)
Q Consensus 151 ~~~~~v~~Ll~~~~~ 165 (624)
++.+++++|++.+.+
T Consensus 79 ~~~~~~~~Ll~~g~~ 93 (126)
T 1n0r_A 79 GHLEVVKLLLEAGAD 93 (126)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred ChHHHHHHHHHcCCC
Confidence 999999999987654
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-21 Score=194.00 Aligned_cols=139 Identities=12% Similarity=0.116 Sum_probs=122.5
Q ss_pred CCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhcc------CCCCCChHHHHHHHc---CCHHHHHHHHhcCCCC
Q 006942 28 PGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLAR------QDNHGHTAATLSAAK---GNLRALKLLVKYNPDL 98 (624)
Q Consensus 28 ~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~------~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~~~~l 98 (624)
.+ .++||.|+. .| +.+.|+.|++.+ .+++. .|..|.||||+|+.. |+.+++++|++++++
T Consensus 150 ~~-~~~L~~A~~----~g---~~~~v~~ll~~g--~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad- 218 (301)
T 2b0o_E 150 PE-PQRLWTAIC----NR---DLLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH- 218 (301)
T ss_dssp -C-HHHHHHHHH----TT---CHHHHHHHHHTT--CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-
T ss_pred ch-HHHHhhhhh----cc---CHHHHHHHHhcC--CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-
Confidence 35 688999999 99 999999999987 55665 689999999999997 999999999999988
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHH
Q 006942 99 TNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIIL 178 (624)
Q Consensus 99 ~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpL 178 (624)
++.+|..|.||||+|+..|+.+++++|++.+++.+. +|.+|.||||+|+..|+.+++++|++.+.+ .|.|||
T Consensus 219 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpL 290 (301)
T 2b0o_E 219 LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGT-VNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPL 290 (301)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSC-CCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChh
Confidence 888999999999999999999999999999999988 999999999999999999999999997653 589999
Q ss_pred HHHHcCC
Q 006942 179 NTLAQKP 185 (624)
Q Consensus 179 h~Aa~~~ 185 (624)
|+|++.+
T Consensus 291 h~A~~~g 297 (301)
T 2b0o_E 291 HVDYSWV 297 (301)
T ss_dssp C------
T ss_pred HHHHhcC
Confidence 9999875
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A | Back alignment and structure |
|---|
Probab=99.84 E-value=3.7e-21 Score=179.91 Aligned_cols=129 Identities=18% Similarity=0.186 Sum_probs=117.1
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCC-C
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRH-G 104 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n-~ 104 (624)
+.+| +||||.||. .| +.++++.|++ + .+++.+|..|.||||+|+..|+.+++++|++++++ ++.+| .
T Consensus 41 ~~~g-~t~L~~A~~----~g---~~~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~ 108 (183)
T 3deo_A 41 VSEY-ETPWWTAAR----KA---DEQALSQLLE-D--RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMR 108 (183)
T ss_dssp HHHH-HHHHHHHHH----TT---CHHHHHHHTT-T--SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSS
T ss_pred CCCC-CCHHHHHHH----cC---CHHHHHHHHh-c--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCC
Confidence 5678 999999999 99 9999999999 5 67899999999999999999999999999999998 66666 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 105 EGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 105 ~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
.|.||||+|+..|+.+++++|++++++.+. +|.+|.||||+|+..++. ..+.+||++|++.
T Consensus 109 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~ 169 (183)
T 3deo_A 109 GGLTALHMAAGYVRPEVVEALVELGADIEV-EDERGLTALELAREILKT------------------TPKGNPMQFGRRI 169 (183)
T ss_dssp SSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHH
T ss_pred CCCCHHHHHHhcCcHHHHHHHHHcCCCCcC-CCCCCCCHHHHHHHhccC------------------cccccHHHHHHHc
Confidence 899999999999999999999999999988 899999999999975432 3567999999976
Q ss_pred C
Q 006942 185 P 185 (624)
Q Consensus 185 ~ 185 (624)
+
T Consensus 170 ~ 170 (183)
T 3deo_A 170 G 170 (183)
T ss_dssp H
T ss_pred C
Confidence 3
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-21 Score=187.39 Aligned_cols=129 Identities=16% Similarity=0.125 Sum_probs=114.3
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhc-CCCCcccCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKY-NPDLTNIRHG 104 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~-~~~l~~~~n~ 104 (624)
+.+| .||||+||. .| +.++|+.|++.+ .+++.+|..|.||||+||..|+.++|++|++. +.+ ++.+|.
T Consensus 70 ~~~g-~t~L~~A~~----~g---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~ 138 (222)
T 3ehr_A 70 AESI-DNPLHEAAK----RG---NLSWLRECLDNR--VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNK 138 (222)
T ss_dssp EEEE-SCHHHHHHH----HT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCT
T ss_pred cccc-ccccccccc----cC---cHHHHHHHHhCC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCC
Confidence 5678 999999999 99 999999999987 67899999999999999999999999999999 666 889999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCC
Q 006942 105 EGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTI 166 (624)
Q Consensus 105 ~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l 166 (624)
.|.||||+|+..|+.+++++|++++++.+. +|.+|.||||+|+..++.++++.|++.+...
T Consensus 139 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 139 LGDTALHAAAWKGYADIVQLLLAKGARTDL-RNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHTCCSCC-CCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcc-ccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 999999999999999999999999999988 9999999999999999999999999876543
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-21 Score=188.05 Aligned_cols=129 Identities=18% Similarity=0.195 Sum_probs=117.0
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCC-C
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRH-G 104 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n-~ 104 (624)
+.+| +||||.||. .| +.++|+.|++ + .+++.+|..|.||||+||..|+.++|++|++++++ ++.++ .
T Consensus 42 ~~~g-~t~L~~A~~----~g---~~~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~ 109 (244)
T 3ui2_A 42 VSEY-ETPWWTAAR----KA---DEQALSQLLE-D--RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMR 109 (244)
T ss_dssp HHHH-HHHHHHHHT----TT---CHHHHHHTTT-T--CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSS
T ss_pred ccCC-CCHHHHHHH----cC---CHHHHHHHHc-C--CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCC
Confidence 4578 999999999 99 9999999999 5 67899999999999999999999999999999998 66666 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 105 EGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 105 ~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
.|.||||+|+..|+.+++++|++++++.+. +|..|.||||+|+..+ .+..+.||||+|+..
T Consensus 110 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t~l~~A~~~~------------------~~~~~~~~l~~a~~~ 170 (244)
T 3ui2_A 110 GGLTALHMAAGYVRPEVVEALVELGADIEV-EDERGLTALELAREIL------------------KTTPKGNPMQFGRRI 170 (244)
T ss_dssp SCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHH------------------TTCCCSSHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHHH------------------hccCCCCHHHHHHHc
Confidence 899999999999999999999999999988 8999999999998632 125688999999977
Q ss_pred C
Q 006942 185 P 185 (624)
Q Consensus 185 ~ 185 (624)
+
T Consensus 171 g 171 (244)
T 3ui2_A 171 G 171 (244)
T ss_dssp H
T ss_pred C
Confidence 4
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-20 Score=165.40 Aligned_cols=115 Identities=18% Similarity=0.245 Sum_probs=108.3
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHH
Q 006942 67 RQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSF 146 (624)
Q Consensus 67 ~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~ 146 (624)
.+|.+|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|++.+.+.+. ++..|.||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT-TGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC-cCCCCCCHHHH
Confidence 6789999999999999999999999999888 788999999999999999999999999999999888 89999999999
Q ss_pred HHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 147 LIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 147 A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
|+..|+.++++.|++.+.++ +.+|.+|.||||+|+..
T Consensus 83 A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~ 119 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGASR-NAVNIFGLRPVDYTDDE 119 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGCCCH
T ss_pred HHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhc
Confidence 99999999999999987765 67899999999999865
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-20 Score=160.34 Aligned_cols=113 Identities=16% Similarity=0.114 Sum_probs=103.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q 006942 69 DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLI 148 (624)
Q Consensus 69 d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~ 148 (624)
+..|.||||.|+..|+.++++.|++.+++ ++.+|..|.||||+|+..|+.+++++|++.+++.+. +|.+|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-PDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHH
Confidence 56788999999999999999999999988 788999999999999999999999999999999888 8999999999999
Q ss_pred HhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 149 AANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 149 ~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
..|+.++++.|++.+.++ +.+|.+|.||||+|...
T Consensus 82 ~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADK-TVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCCH
T ss_pred HcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHhCCH
Confidence 999999999999998775 67899999999998543
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-20 Score=190.53 Aligned_cols=134 Identities=21% Similarity=0.164 Sum_probs=113.6
Q ss_pred CccCCCHHHHHHHHHcCccccccc-----cCCCCCchHHHHHHhhhhhc---CCcchHHHHHHHHHccCchhhccCCCCC
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAK-----IVEPGSMTIFHMIVELLIDA---ESDEAICLLDKLASKVDPETLARQDNHG 72 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~-----~~~~g~~T~Lh~Aa~~~~~~---g~~~~~~iv~~Ll~~~~~~~~~~~d~~G 72 (624)
|+..|+.+.++.+++...+ ++.. .+..| +||||+||. . | +.++|++|++.+ .+++.+|.+|
T Consensus 158 A~~~g~~~~v~~ll~~g~d-~~~~~~~~~~~~~g-~t~Lh~A~~----~~~~~---~~~iv~~Ll~~g--advn~~d~~G 226 (301)
T 2b0o_E 158 AICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPE-ELVLHLAVK----VANQA---SLPLVDFIIQNG--GHLDAKAADG 226 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCC-TTSCEECSSSCSCE-ECHHHHHHH----TCCTT---THHHHHHHHHHS--SCTTCCCTTC
T ss_pred hhhccCHHHHHHHHhcCCc-ccccCCCcccCCCC-ccHHHHHHH----hcccC---cHHHHHHHHhcC--CCCCCCCCCC
Confidence 5789999999999977654 3331 27789 999999999 8 8 999999999997 7889999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCc
Q 006942 73 HTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANL 152 (624)
Q Consensus 73 ~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~ 152 (624)
+||||+|+..|+.++|++|++++++ ++.+|..|.||||+|+..|+.+++++|++.+++ .|.||||+|+..|+
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVI 298 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCC
Confidence 9999999999999999999999998 889999999999999999999999999998754 57899999999886
Q ss_pred H
Q 006942 153 Y 153 (624)
Q Consensus 153 ~ 153 (624)
.
T Consensus 299 ~ 299 (301)
T 2b0o_E 299 S 299 (301)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-20 Score=163.86 Aligned_cols=116 Identities=20% Similarity=0.198 Sum_probs=106.5
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
|+..|+.+.++.+++... .++.+ +..| .||||+||. .| +.+++++|++.+ .+++.+|..|.||||+|+
T Consensus 21 A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g-~t~L~~A~~----~~---~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 21 AARAGQDDEVRILMANGA-DVNAK-DEYG-LTPLYLATA----HG---HLEIVEVLLKNG--ADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp HHHHTCHHHHHHHHHTTC-CTTCC-CTTS-CCHHHHHHH----HT---CHHHHHHHHHTT--CCTTCCCTTCCCHHHHHH
T ss_pred HHHhCCHHHHHHHHHcCC-CCCCc-CCCC-CCHHHHHHH----cC---CHHHHHHHHHcC--CCCCcCCCCCCCHHHHHH
Confidence 678999999999998854 45555 8889 999999999 99 999999999997 678999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhc
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVT 129 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~ 129 (624)
..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 89 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999988 7889999999999999999999999999864
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=9e-20 Score=149.98 Aligned_cols=92 Identities=28% Similarity=0.417 Sum_probs=79.0
Q ss_pred CCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCC
Q 006942 28 PGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGF 107 (624)
Q Consensus 28 ~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~ 107 (624)
+| +||||+||. .| +.+++++|++.+ .+++.+|.+|.||||+|+..|+.+++++|++++++ ++.+|.+|.
T Consensus 1 ~g-~t~L~~A~~----~~---~~~~v~~Ll~~g--~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~ 69 (93)
T 1n0q_A 1 NG-RTPLHLAAR----NG---HLEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGR 69 (93)
T ss_dssp ---CCHHHHHHH----HT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSC
T ss_pred CC-CcHHHHHHH----cC---CHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCC
Confidence 36 899999999 89 899999999886 67788888899999999999999999999988887 778888899
Q ss_pred hHHHHHHHcCCHHHHHHHHHhcC
Q 006942 108 LPVHDAALYGHKDTFHYLLEVTH 130 (624)
Q Consensus 108 TPLh~Aa~~g~~~iv~~Ll~~~~ 130 (624)
||||+|+..|+.+++++|++.++
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 70 TPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999999999999988875
|
| >3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-19 Score=186.76 Aligned_cols=145 Identities=12% Similarity=0.138 Sum_probs=117.4
Q ss_pred CCCchHHHHHHhhhhhc-CCcchHHHHHHHHHccCchhhccCC--CCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCC
Q 006942 28 PGSMTIFHMIVELLIDA-ESDEAICLLDKLASKVDPETLARQD--NHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHG 104 (624)
Q Consensus 28 ~g~~T~Lh~Aa~~~~~~-g~~~~~~iv~~Ll~~~~~~~~~~~d--~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~ 104 (624)
.+ .|+||.|+. . | +.++++.|++.+ .+++..| ..|.||||+||..|+.++|++|++++++ ++.+|.
T Consensus 198 ~~-~t~L~~Aa~----~~g---~~~~v~~LL~~G--advn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~ 266 (368)
T 3jue_A 198 HP-GALLFRASG----HPP---SLPTMADALAHG--ADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADS 266 (368)
T ss_dssp CH-HHHHHHHTS----SSC---CHHHHHHHHHTT--CCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCT
T ss_pred CC-CcHHHHHHH----ccC---CHHHHHHHHHcC--CCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCC
Confidence 45 789999999 9 9 999999999997 6777777 8999999999999999999999999988 889999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCC--cccCCCCCCHHHHHH
Q 006942 105 EGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIG--RDSIDSRRIILNTLA 182 (624)
Q Consensus 105 ~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~--~~~d~~G~TpLh~Aa 182 (624)
.|.||||+|+..|+.+++++|++++++.+. +|.+|.||||+|+..++.+++++|++...... ...+..+.|+++++.
T Consensus 267 ~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~-~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 267 AGRGPLHHATILGHTGLACLFLKRGADLGA-RDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHCcCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence 999999999999999999999999999988 89999999999999999999999998754322 234566888888766
Q ss_pred cC
Q 006942 183 QK 184 (624)
Q Consensus 183 ~~ 184 (624)
..
T Consensus 346 ~~ 347 (368)
T 3jue_A 346 DF 347 (368)
T ss_dssp --
T ss_pred HH
Confidence 43
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=5.9e-19 Score=145.06 Aligned_cols=92 Identities=30% Similarity=0.426 Sum_probs=86.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Q 006942 71 HGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAA 150 (624)
Q Consensus 71 ~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~ 150 (624)
+|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|++.+++.+. +|.+|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHc
Confidence 589999999999999999999999988 889999999999999999999999999999999988 899999999999999
Q ss_pred CcHHHHHHHHHhCC
Q 006942 151 NLYDVALDLLKRHP 164 (624)
Q Consensus 151 ~~~~~v~~Ll~~~~ 164 (624)
|+.++++.|++.+.
T Consensus 79 ~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 79 GHLEVVKLLLEAGA 92 (93)
T ss_dssp TCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCC
Confidence 99999999998764
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=174.31 Aligned_cols=125 Identities=18% Similarity=0.179 Sum_probs=116.0
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchh----hccCCCCCChHHHHHHHc---CCHHHHHHHHhcCCCCcccCC
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPET----LARQDNHGHTAATLSAAK---GNLRALKLLVKYNPDLTNIRH 103 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~----~~~~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~~~~l~~~~n 103 (624)
.++||.|+. .| +.+.++.+++.+.+.. ++..|..|.||||+||.. |+.+++++|++++++ ++.+|
T Consensus 131 l~~l~~a~~----~~---d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d 202 (278)
T 1dcq_A 131 LHSLCEAVK----TR---DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQT 202 (278)
T ss_dssp HHHHHHHHH----TT---CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCC
T ss_pred hhhhhhHhh----hc---ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccC
Confidence 578999999 99 9999999999974322 566689999999999999 999999999999998 88999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCC
Q 006942 104 GEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHP 164 (624)
Q Consensus 104 ~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~ 164 (624)
..|.||||+|+..|+.+++++|++.+++.+. +|.+|.||||+|+..|+.++++.|++.+.
T Consensus 203 ~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 203 GKGSTALHYCCLTDNAECLKLLLRGKASIEI-ANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-ccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999999999999999999999998 99999999999999999999999999865
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-18 Score=174.49 Aligned_cols=121 Identities=23% Similarity=0.297 Sum_probs=109.8
Q ss_pred CccCCCHHHHHHHHHcCccc-----cccccCCCCCchHHHHHHhhhhhc---CCcchHHHHHHHHHccCchhhccCCCCC
Q 006942 1 MIEKNDWQGVEDFVTNHPDA-----LTAKIVEPGSMTIFHMIVELLIDA---ESDEAICLLDKLASKVDPETLARQDNHG 72 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~-----~~~~~~~~g~~T~Lh~Aa~~~~~~---g~~~~~~iv~~Ll~~~~~~~~~~~d~~G 72 (624)
|+..||.+.++.+++...+. ++.. +..| +||||+||. . | +.++|++|++.+ ++++.+|.+|
T Consensus 137 a~~~~d~~~~~~ll~~g~~~~~~~~l~~~-~~~g-~t~Lh~A~~----~~~~~---~~~~v~~Ll~~g--a~in~~d~~g 205 (278)
T 1dcq_A 137 AVKTRDIFGLLQAYADGVDLTEKIPLANG-HEPD-ETALHLAVR----SVDRT---SLHIVDFLVQNS--GNLDKQTGKG 205 (278)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTSBCCCSSC-SSTT-CBHHHHHHH----HCCTT---THHHHHHHHHHC--SCTTCCCTTC
T ss_pred HhhhcccHHHHHHHHhhcchhhhcccccc-ccCC-CCcchHHHH----hcccc---hHHHHHHHHHCC--CCccccCCCC
Confidence 56789999999999886653 3333 7889 999999999 9 8 999999999997 7889999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCc
Q 006942 73 HTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVD 133 (624)
Q Consensus 73 ~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~ 133 (624)
.||||+|+..|+.++|++|++++++ ++.+|.+|.||||+|+..|+.+++++|++.+++..
T Consensus 206 ~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 206 STALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999998 88999999999999999999999999999987643
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A | Back alignment and structure |
|---|
Probab=99.77 E-value=9.4e-19 Score=168.80 Aligned_cols=117 Identities=18% Similarity=0.128 Sum_probs=108.5
Q ss_pred hccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHh-cCCCccccCCCCCcH
Q 006942 65 LARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEV-THGVDIYSGKDGANV 143 (624)
Q Consensus 65 ~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~G~t~ 143 (624)
++..+..|.||||+||..|+.++++.|++.+++ ++.+|..|.||||+||..|+.+++++|++. +.+.+. +|..|.||
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~-~d~~g~tp 143 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ-QNKLGDTA 143 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC-CCTTSCCH
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc-cCCCCCCH
Confidence 455677899999999999999999999999988 788999999999999999999999999998 888888 89999999
Q ss_pred HHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 144 LSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 144 Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
||+|+..|+.++++.|++.+.++ +.+|.+|.||||+|+..
T Consensus 144 L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~ 183 (222)
T 3ehr_A 144 LHAAAWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNA 183 (222)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcch
Confidence 99999999999999999998775 67899999999999875
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.2e-19 Score=151.59 Aligned_cols=106 Identities=25% Similarity=0.282 Sum_probs=87.1
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
|.+| +||||+||. .| +.++++.|++.+ .+++.+|..|.||||+|+..|+.+++++|++++++ ++.+|..
T Consensus 6 d~~g-~t~L~~A~~----~~---~~~~~~~Ll~~g--~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~ 74 (115)
T 2l6b_A 6 SKDG-NTPLHNAAK----NG---HAEEVKKLLSKG--ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKD 74 (115)
T ss_dssp SCSS-CCHHHHHHH----HT---CHHHHHHHTTTT--CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTT
T ss_pred CCCC-CCHHHHHHH----cC---CHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCC
Confidence 6778 888888888 88 888888888886 56778888888888888888888888888888877 6778888
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcH
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANV 143 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~ 143 (624)
|.||||+|+..|+.+++++|++++++.+. ++..|.+|
T Consensus 75 g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~-~~~~~~~~ 111 (115)
T 2l6b_A 75 GNTPEHLAKKNGHHEIVKLLDAKGADVNA-RSWGSSHH 111 (115)
T ss_dssp CCCTTHHHHTTTCHHHHHHHHTTSSSHHH-HSCCCC--
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCc-CCcccccc
Confidence 88888888888888888888888888777 77777766
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-18 Score=147.76 Aligned_cols=109 Identities=21% Similarity=0.221 Sum_probs=99.6
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHH
Q 006942 67 RQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSF 146 (624)
Q Consensus 67 ~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~ 146 (624)
.+|.+|.||||+||..|+.++++.|++++++ ++.+|..|.||||+|+..|+.+++++|++.+++.+. +|..|.||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA-RSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC-CCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCCHHHH
Confidence 5789999999999999999999999999988 788999999999999999999999999999999888 89999999999
Q ss_pred HHHhCcHHHHHHHHHhCCCCCcccCCCCCCHH
Q 006942 147 LIAANLYDVALDLLKRHPTIGRDSIDSRRIIL 178 (624)
Q Consensus 147 A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpL 178 (624)
|+..++.++++.|++++.++ +.++..|.||-
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~-n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADV-NARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSH-HHHSCCCC---
T ss_pred HHHCCCHHHHHHHHHcCCCC-CcCCccccccc
Confidence 99999999999999988775 66788888773
|
| >3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.7e-17 Score=170.05 Aligned_cols=137 Identities=14% Similarity=0.081 Sum_probs=106.5
Q ss_pred CccC-CCHHHHHHHHHcCccccccccC--CCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHH
Q 006942 1 MIEK-NDWQGVEDFVTNHPDALTAKIV--EPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAAT 77 (624)
Q Consensus 1 Aa~~-G~~~~v~~ll~~~~~~~~~~~~--~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh 77 (624)
|+.. |+.+.++.+++...+ ++.. + ..| .||||+||. .| +.++|++|++.+ .+++.+|..|.||||
T Consensus 206 Aa~~~g~~~~v~~LL~~Gad-vn~~-~~~~~g-~TpLh~Aa~----~g---~~~iv~~LL~~G--advn~~d~~G~TpLh 273 (368)
T 3jue_A 206 ASGHPPSLPTMADALAHGAD-VNWV-NGGQDN-ATPLIQATA----AN---SLLACEFLLQNG--ANVNQADSAGRGPLH 273 (368)
T ss_dssp HTSSSCCHHHHHHHHHTTCC-TTCC-CTTTTC-CCHHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTSCCHHH
T ss_pred HHHccCCHHHHHHHHHcCCC-CCcc-ccccCC-CCHHHHHHH----CC---CHHHHHHHHHcC--CCCCCCCCCCCCHHH
Confidence 4667 999999999987543 4444 4 789 999999999 99 999999999997 788999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccc--cCCCCCcHHHHHHHh
Q 006942 78 LSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIY--SGKDGANVLSFLIAA 150 (624)
Q Consensus 78 ~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~--~~~~G~t~Lh~A~~~ 150 (624)
+|+..|+.++|++|++++++ ++.+|..|.||||+|+..|+.+++++|+..+...... .+..+.|+++.+...
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 99999999999999999998 7899999999999999999999999999887443221 566677787766543
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A | Back alignment and structure |
|---|
Probab=99.69 E-value=5.2e-17 Score=137.93 Aligned_cols=89 Identities=20% Similarity=0.149 Sum_probs=74.3
Q ss_pred CCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 26 VEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 26 ~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
+.+| .||||+||. .| +.+++++|++.+ .+++.+|..|.||||+||..|+.+++++|++++++ ++.+|..
T Consensus 21 ~~~g-~t~L~~A~~----~g---~~~~v~~Ll~~g--~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~ 89 (110)
T 2zgd_A 21 GSDL-GKKLLEAAR----AG---QDDEVRILMANG--ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKF 89 (110)
T ss_dssp -CCH-HHHHHHHHH----HT---CHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred CCcc-chHHHHHHH----cC---CHHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccC
Confidence 7778 888888888 88 888888888876 67778888888888888888888888888888777 7778888
Q ss_pred CChHHHHHHHcCCHHHHHHH
Q 006942 106 GFLPVHDAALYGHKDTFHYL 125 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~L 125 (624)
|.||||+|+..|+.+++++|
T Consensus 90 g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp SCCHHHHHHHHTCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHh
Confidence 88888888888888888876
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-16 Score=135.24 Aligned_cols=95 Identities=22% Similarity=0.223 Sum_probs=84.4
Q ss_pred hhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCc
Q 006942 63 ETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGAN 142 (624)
Q Consensus 63 ~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t 142 (624)
......|.+|.||||+||..|+.+++++|++.+++ ++.+|..|.||||+||..|+.+++++|++++++.+. +|..|.|
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~t 92 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA-QDKFGKT 92 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cccCCCc
Confidence 34567789999999999999999999999999887 788999999999999999999999999999999888 8999999
Q ss_pred HHHHHHHhCcHHHHHHH
Q 006942 143 VLSFLIAANLYDVALDL 159 (624)
Q Consensus 143 ~Lh~A~~~~~~~~v~~L 159 (624)
|||+|+..|+.++++.|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999876
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 624 | ||||
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 9e-09 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 3e-07 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 5e-07 | |
| d1s70b_ | 291 | d.211.1.1 (B:) Myosin phosphatase targeting subuni | 2e-06 | |
| d1wdya_ | 285 | d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas | 3e-06 | |
| d2ajaa1 | 346 | a.118.24.1 (A:3-348) Hypothetical protein LPG2416 | 2e-05 | |
| d2ajaa1 | 346 | a.118.24.1 (A:3-348) Hypothetical protein LPG2416 | 0.002 | |
| d1oy3d_ | 255 | d.211.1.1 (D:) Transcription factor inhibitor I-ka | 3e-05 | |
| d1oy3d_ | 255 | d.211.1.1 (D:) Transcription factor inhibitor I-ka | 8e-04 | |
| d2fo1e1 | 277 | d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele | 1e-04 | |
| d2fo1e1 | 277 | d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele | 5e-04 | |
| d1sw6a_ | 301 | d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker | 0.002 | |
| d1ixva_ | 229 | d.211.1.1 (A:) 26S proteasome non-ATPase regulator | 0.002 | |
| d1uoha_ | 223 | d.211.1.1 (A:) 26S proteasome non-ATPase regulator | 0.002 |
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.4 bits (132), Expect = 9e-09
Identities = 52/318 (16%), Positives = 97/318 (30%), Gaps = 44/318 (13%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
G T ++A G +R +LL++ + N G P+H A + + D LL
Sbjct: 128 MTKKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKLLLP 186
Query: 128 VTHGVDIYS-GKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPY 186
G +S +G L N +VA LL+ + P
Sbjct: 187 --RGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG---------SANAESVQGVTPL 235
Query: 187 AFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGS 246
A+ + L+ + + G + +H
Sbjct: 236 HLAA----------QEGHAEMVALLLSKQANGNLGNKSGL-------TPLHLVAQEGHVP 278
Query: 247 TQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQ 306
+ G M+ RM + +H +++V+ + + N +
Sbjct: 279 VADVLIKHGVMVDATTRMGYTPLHV------------ASHYGNIKLVKFLLQHQADVNAK 326
Query: 307 NSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQG 366
S + AA G ++V ++ +S N + DG T A V ++++
Sbjct: 327 TKLGYS-PLHQAAQQGHTDIV-TLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKV 384
Query: 367 VNFTTFLFSSRDKAGNNI 384
V T DK +
Sbjct: 385 VTDETSFVLVSDKHRMSF 402
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.4 bits (119), Expect = 3e-07
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Query: 74 TAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVD 133
T +++ G+L +K L++ N+ + + P+H AA GH + YLL+ +
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASP-NVSNVKVETPLHMAARAGHTEVAKYLLQ--NKAK 58
Query: 134 I-YSGKDGANVLSFLIAANLYDVALDLLKRHPTI 166
+ KD L ++ LL+ +
Sbjct: 59 VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANP 92
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.0 bits (118), Expect = 5e-07
Identities = 47/342 (13%), Positives = 104/342 (30%), Gaps = 33/342 (9%)
Query: 56 LASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAAL 115
L P + T ++A G+ K L++ + N + + P+H AA
Sbjct: 20 LQRGASPNV---SNVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAAR 75
Query: 116 YGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRR 175
GH + LLE ++ + +A + ++ +
Sbjct: 76 IGHTNMVKLLLENNANPNLATTAGH----------TPLHIAAREGHVETVLALLEKEASQ 125
Query: 176 IILNTLAQKPYAFAS-GSRLGRLQRLIYNCIPVEKE-------LVPSIQTNDYHDLDGDI 227
+ P A+ ++ + L+ L ++ N+ DI
Sbjct: 126 ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL-----DI 180
Query: 228 ESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKL-TH 286
++ G T + +L + ++G+ L
Sbjct: 181 VKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQ 240
Query: 287 MRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGH 346
E+V ++ N N + L+ L A +P V + ++ + + + + G+
Sbjct: 241 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVP--VADVLIKHGVMVDATTRMGY 298
Query: 347 TIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLA 388
T L++ + +++ K G + LH A
Sbjct: 299 TPLHV---ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQA 337
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 47.4 bits (111), Expect = 2e-06
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 67 RQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLL 126
R G TA ++AAKG LKLL++ D+ NI+ +G+ P+H AA +G ++ L+
Sbjct: 194 RHAKSGGTALHVAAAKGYTEVLKLLIQARYDV-NIKDYDGWTPLHAAAHWGKEEACRILV 252
Query: 127 EVTHGVDIYS-GKDGANVLSFLIAANLYDVALDLLKRH 163
E + D+ + K G + ++ +L K+
Sbjct: 253 E--NLCDMEAVNKVGQTAFD-VADEDILGYLEELQKKQ 287
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.9 bits (110), Expect = 3e-06
Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+ G T L+ K +L ++ L++ N +G + A K L +
Sbjct: 215 RGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK 274
Query: 128 VTHGVDI 134
G
Sbjct: 275 --RGAST 279
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Score = 44.5 bits (104), Expect = 2e-05
Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 10/94 (10%)
Query: 37 IVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALK---LLVK 93
+ +LL + + ++ ++A G AL LL+
Sbjct: 61 VRQLLCLYYAHYNRNAKQLWSD------AHKKGIKSEVICFVAAITGCSSALDTLCLLLT 114
Query: 94 YNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+ + + E + AA GH + L E
Sbjct: 115 SDEIV-KVIQAENYQAFRLAAENGHLHVLNRLCE 147
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Score = 37.9 bits (87), Expect = 0.002
Identities = 22/118 (18%), Positives = 36/118 (30%), Gaps = 8/118 (6%)
Query: 48 EAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNI-RHGEG 106
+ +CLL V + A L+A G+L L L + P E
Sbjct: 107 DTLCLLLTSDEIVK-----VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN 161
Query: 107 FLPVHDAALYGHKDTFHYLLEVTHGVDIY--SGKDGANVLSFLIAANLYDVALDLLKR 162
+ AA GH + L E+ ++ + ++V LL
Sbjct: 162 YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC 219
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Score = 43.9 bits (102), Expect = 3e-05
Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 3/111 (2%)
Query: 65 LARQDNHGHTAATLSAAKGNLRALKLLVKY--NPDLTNIRHGEGFLPVHDAALYGHKDTF 122
G TA L+ + L L+ + + ++++ G +H AA+ G T
Sbjct: 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61
Query: 123 HYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDS 173
L GV + + + A LL+ P+ RD+ D+
Sbjct: 62 EKLYAAGAGVLVAERGGHTAL-HLACRVRAHTCACVLLQPRPSHPRDASDT 111
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Score = 39.3 bits (90), Expect = 8e-04
Identities = 16/64 (25%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+ G T L+ L+LL+K D R G P+ A L + L
Sbjct: 188 EPTCGRTPLHLAVEAQAASVLELLLKAGADP-TARMYGGRTPLGSALLRPNPILARLLRA 246
Query: 128 VTHG 131
HG
Sbjct: 247 --HG 248
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Score = 42.0 bits (97), Expect = 1e-04
Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
+ G TA +A N+ +K LV + + +G P+ AA G + YL++
Sbjct: 183 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ 242
Query: 128 VTHGVDIYS-GKDGANVLSFLIAANLYDVALDLLKR 162
G + + A N +++ D+ R
Sbjct: 243 --QGASVEAVDATDHTARQLAQANNHHNIV-DIFDR 275
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Score = 40.1 bits (92), Expect = 5e-04
Identities = 33/287 (11%), Positives = 73/287 (25%), Gaps = 22/287 (7%)
Query: 79 SAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGK 138
+ A G+ + + + + ++ + RH +H A + L+ I +G
Sbjct: 8 TEAAGSYAITEPITRESVNIIDPRHNRT--VLHWIASNSSAEKSEDLIVHEAKECIAAG- 64
Query: 139 DGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQ 198
A++ + D L P + R Q
Sbjct: 65 -----------ADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQ 113
Query: 199 RLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAML 258
+ ++ S + + Q+ + +
Sbjct: 114 AAANRDFGMMVYMLNSTKLKGDIE------ELDRNGMTALMIVAHNEGRDQVASAKLLVE 167
Query: 259 HKLHRMLWNAXMHLSPGIKGIHDQKLTHMRT-VEIVRIICEGVVWTNFQNSAQLSVAMLA 317
A S KG + + IV+ + + ++
Sbjct: 168 KGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIML 227
Query: 318 AAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLI 364
AA G EVV +++ +S + HT A + ++
Sbjct: 228 AAQEGRIEVV-MYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIF 273
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.5 bits (88), Expect = 0.002
Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 4/81 (4%)
Query: 56 LASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLV--KYNPDLTNIRHGEGFLPVHDA 113
K + N + + L+ L ++ N + G ++ A
Sbjct: 207 WIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIA 266
Query: 114 ALYGHKDTFHYLLEVTHGVDI 134
A G+ LL+ +G D
Sbjct: 267 ARLGNISIVDALLD--YGADP 285
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.9 bits (86), Expect = 0.002
Identities = 6/51 (11%), Positives = 19/51 (37%)
Query: 74 TAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHY 124
+ + ++ L+ P L + +G +P+H + + + +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSF 52
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.6 bits (86), Expect = 0.002
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 68 QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLE 127
QD G+T L+ + + KLLV + I + E P+ A G ++E
Sbjct: 165 QDTEGNTPLHLACDEERVEEAKLLVSQGASI-YIENKEEKTPLQVAK-GGLGLILKRMVE 222
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 624 | |||
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1oy3d_ | 255 | Transcription factor inhibitor I-kappa-B-beta, IKB | 100.0 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1uoha_ | 223 | 26S proteasome non-ATPase regulatory subunit 10, g | 100.0 | |
| d1uoha_ | 223 | 26S proteasome non-ATPase regulatory subunit 10, g | 100.0 | |
| d1s70b_ | 291 | Myosin phosphatase targeting subunit 1, MYPT1 {Chi | 100.0 | |
| d1oy3d_ | 255 | Transcription factor inhibitor I-kappa-B-beta, IKB | 100.0 | |
| d2fo1e1 | 277 | Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | 99.98 | |
| d1ixva_ | 229 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.97 | |
| d1wdya_ | 285 | RNase L, 2-5a-dependent ribonuclease {Human (Homo | 99.97 | |
| d2fo1e1 | 277 | Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | 99.96 | |
| d1wdya_ | 285 | RNase L, 2-5a-dependent ribonuclease {Human (Homo | 99.96 | |
| d1k1aa_ | 228 | bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d1ixva_ | 229 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.96 | |
| d1iknd_ | 221 | I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 | 99.96 | |
| d1iknd_ | 221 | I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 | 99.96 | |
| d1s70b_ | 291 | Myosin phosphatase targeting subunit 1, MYPT1 {Chi | 99.95 | |
| d2ajaa1 | 346 | Hypothetical protein LPG2416 {Legionella pneumophi | 99.94 | |
| d1ot8a_ | 209 | Neurogenic locus notch receptor domain {Fruit fly | 99.94 | |
| d1ot8a_ | 209 | Neurogenic locus notch receptor domain {Fruit fly | 99.94 | |
| d1k1aa_ | 228 | bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.93 | |
| d1ihba_ | 156 | p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] | 99.92 | |
| d2ajaa1 | 346 | Hypothetical protein LPG2416 {Legionella pneumophi | 99.91 | |
| d1ihba_ | 156 | p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] | 99.91 | |
| d1bd8a_ | 156 | Cell cycle inhibitor p19ink4D {Human (Homo sapiens | 99.91 | |
| d1awcb_ | 153 | GA bindinig protein (GABP) beta 1 {Mouse (Mus musc | 99.9 | |
| d1bd8a_ | 156 | Cell cycle inhibitor p19ink4D {Human (Homo sapiens | 99.9 | |
| d1sw6a_ | 301 | Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch | 99.89 | |
| d1bi7b_ | 125 | Cell cycle inhibitor p16ink4A {Human (Homo sapiens | 99.87 | |
| d1awcb_ | 153 | GA bindinig protein (GABP) beta 1 {Mouse (Mus musc | 99.87 | |
| d1myoa_ | 118 | Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] | 99.86 | |
| d1sw6a_ | 301 | Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch | 99.85 | |
| d1ycsb1 | 130 | 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | 99.85 | |
| d1myoa_ | 118 | Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] | 99.83 | |
| d1dcqa1 | 154 | Pyk2-associated protein beta {Mouse (Mus musculus) | 99.82 | |
| d1dcqa1 | 154 | Pyk2-associated protein beta {Mouse (Mus musculus) | 99.81 | |
| d1bi7b_ | 125 | Cell cycle inhibitor p16ink4A {Human (Homo sapiens | 99.81 | |
| d1ycsb1 | 130 | 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | 99.79 |
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-37 Score=322.98 Aligned_cols=334 Identities=17% Similarity=0.134 Sum_probs=252.3
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
||..|+.+.|+.+++++ ..++.+ |.+| +||||+||. .| +.++|++|+++| ++++.+|.+|.||||+|+
T Consensus 7 Aa~~g~~~~v~~Ll~~g-~~in~~-d~~g-~TpL~~A~~----~g---~~~iv~~Ll~~g--adi~~~~~~g~t~L~~A~ 74 (408)
T d1n11a_ 7 ASFMGHLPIVKNLLQRG-ASPNVS-NVKV-ETPLHMAAR----AG---HTEVAKYLLQNK--AKVNAKAKDDQTPLHCAA 74 (408)
T ss_dssp HHHHTCHHHHHHHHHTT-CCSCCS-SSCC-CCHHHHHHH----HT---CHHHHHHHHHHT--CCSSCCCTTSCCHHHHHH
T ss_pred HHHCcCHHHHHHHHHCC-CCCCCC-CCCC-CCHHHHHHH----cC---CHHHHHHHHHCc--CCCCCCCCCCCCHHHHHH
Confidence 67899999999999875 456666 8899 999999999 99 999999999997 678999999999999999
Q ss_pred HcCCHHHHHHHHhcCCC--------------------------------CcccCCCCCChHHHHHHHcCCHHHHHHHHHh
Q 006942 81 AKGNLRALKLLVKYNPD--------------------------------LTNIRHGEGFLPVHDAALYGHKDTFHYLLEV 128 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~--------------------------------l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~ 128 (624)
..|+.+++++|++..++ .....+..|.+|++.|+..++.+++++|++.
T Consensus 75 ~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~ 154 (408)
T d1n11a_ 75 RIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER 154 (408)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999876442 1234577899999999999999999999999
Q ss_pred cCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhcccccc
Q 006942 129 THGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVE 208 (624)
Q Consensus 129 ~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~ 208 (624)
+.+.+. .+.+|.+|||+|+..|+.++++.|++++.+. +..+..|.||+|.+..... ......++......
T Consensus 155 ~~~~~~-~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~~t~l~~~~~~~~-------~~~~~~l~~~~~~~- 224 (408)
T d1n11a_ 155 DAHPNA-AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP-HSPAWNGYTPLHIAAKQNQ-------VEVARSLLQYGGSA- 224 (408)
T ss_dssp TCCTTC-CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCS-CCCCTTCCCHHHHHHHTTC-------HHHHHHHHHTTCCT-
T ss_pred CCCCCc-CCCcCchHHHHHHHcCCHHHHHHHHhcCCcc-cccCCCCCCcchhhhccch-------hhhhhhhhhccccc-
Confidence 988887 8999999999999999999999999988765 5678899999999987642 11111111111000
Q ss_pred ccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhh
Q 006942 209 KELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMR 288 (624)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 288 (624)
......+ .+.+ +++...++..
T Consensus 225 ------------------------------~~~~~~~----~t~l-------------------------~~a~~~~~~~ 245 (408)
T d1n11a_ 225 ------------------------------NAESVQG----VTPL-------------------------HLAAQEGHAE 245 (408)
T ss_dssp ------------------------------TCCCTTC----CCHH-------------------------HHHHHTTCHH
T ss_pred ------------------------------cccCCCC----CCHH-------------------------HHHHHhCcHh
Confidence 0000000 0111 1122222222
Q ss_pred HHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 289 TVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 289 ~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
. ++.......... ..+..|.||+|.|++.++.+++++|+++ +.+....+..+.||||.|+..++.++++++++.+
T Consensus 246 ~---~~~~~~~~~~~~-~~~~~g~~~l~~a~~~~~~~i~~~Ll~~-g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g 320 (408)
T d1n11a_ 246 M---VALLLSKQANGN-LGNKSGLTPLHLVAQEGHVPVADVLIKH-GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 320 (408)
T ss_dssp H---HHHHHTTTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT
T ss_pred H---hhhhhccccccc-cccCCCCChhhhhhhcCcHHHHHHHHHC-CCccccccccccccchhhcccCcceeeeeecccc
Confidence 2 233333322112 2566788999999999999999999998 8887766888899999999999999999999888
Q ss_pred ccccccccccCCCCchhhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcCc-ccccccCCCCCChhhhhhHH
Q 006942 369 FTTFLFSSRDKAGNNILHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVHP-FFREATNDLKQTPREVFTEE 440 (624)
Q Consensus 369 ~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~~-~~~~~~N~~G~Tp~dl~~~~ 440 (624)
..+|.+|.+|+||||+|++.|+.+ .|+.++.. ..++.+|++|+||++++.+.
T Consensus 321 ---~~in~~d~~G~T~Lh~A~~~g~~~-----------------iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~ 373 (408)
T d1n11a_ 321 ---ADVNAKTKLGYSPLHQAAQQGHTD-----------------IVTLLLKNGASPNEVSSDGTTPLAIAKRL 373 (408)
T ss_dssp ---CCTTCCCTTSCCHHHHHHHTTCHH-----------------HHHHHHHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred ---ccccccCCCCCCHHHHHHHcCCHH-----------------HHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 567799999999999999988743 23333322 35788899999999988664
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.6e-34 Score=278.33 Aligned_cols=99 Identities=23% Similarity=0.203 Sum_probs=89.9
Q ss_pred cCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccC-chhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCC
Q 006942 25 IVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVD-PETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRH 103 (624)
Q Consensus 25 ~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~-~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n 103 (624)
++++| +||||+||+ .| +.++|++|++.+. +..++.+|.+|.||||+||..|+.+++++|++++++ ++.+|
T Consensus 5 i~~~G-~t~Lh~A~~----~~---~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-i~~~d 75 (255)
T d1oy3d_ 5 VTEDG-DTALHLAVI----HQ---HEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VLVAE 75 (255)
T ss_dssp CCTTC-CCHHHHHHH----TT---CHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCC
T ss_pred CCcCC-CCHHHHHHH----cC---CHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhccccccccccccccc-ccccc
Confidence 58899 999999999 99 9999999999873 344888999999999999999999999999999988 78899
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhcCCC
Q 006942 104 GEGFLPVHDAALYGHKDTFHYLLEVTHGV 132 (624)
Q Consensus 104 ~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~ 132 (624)
.+|.||||+|+..|+.+++++|++.....
T Consensus 76 ~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~ 104 (255)
T d1oy3d_ 76 RGGHTALHLACRVRAHTCACVLLQPRPSH 104 (255)
T ss_dssp TTSCCHHHHHTTTTCHHHHHHHSSSCCSS
T ss_pred cccchhhhhhhccCchHHHHHHHhhccch
Confidence 99999999999999999999999876543
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-32 Score=286.79 Aligned_cols=307 Identities=16% Similarity=0.116 Sum_probs=243.2
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCc------------------
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDP------------------ 62 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~------------------ 62 (624)
|+..|+.+.++.|++++. .++.+ +.+| .||||+|+. .| +.++++.|+.....
T Consensus 40 A~~~g~~~iv~~Ll~~ga-di~~~-~~~g-~t~L~~A~~----~g---~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 109 (408)
T d1n11a_ 40 AARAGHTEVAKYLLQNKA-KVNAK-AKDD-QTPLHCAAR----IG---HTNMVKLLLENNANPNLATTAGHTPLHIAARE 109 (408)
T ss_dssp HHHHTCHHHHHHHHHHTC-CSSCC-CTTS-CCHHHHHHH----HT---CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCcC-CCCCC-CCCC-CCHHHHHHH----cC---CHHHHHHHHHhhhccccccccccchhhhhhhh
Confidence 678899999999998754 56666 8899 999999999 99 99999999976432
Q ss_pred -------------hhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhc
Q 006942 63 -------------ETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVT 129 (624)
Q Consensus 63 -------------~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~ 129 (624)
...+..+.+|.++|+.|+..++.++++.|++++.+ ++..+.+|.+|||+|+..|+.+++++|++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~-~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g 188 (408)
T d1n11a_ 110 GHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRG 188 (408)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGT
T ss_pred cccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCcCchHHHHHHHcCCHHHHHHHHhcC
Confidence 12355678899999999999999999999999887 7788999999999999999999999999999
Q ss_pred CCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccc
Q 006942 130 HGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEK 209 (624)
Q Consensus 130 ~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~ 209 (624)
++.+. .+..|.||+|.++...+.+....++...... ...+.+|.||||+|+..+. ....+.........
T Consensus 189 ~~~~~-~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~t~l~~a~~~~~-------~~~~~~~~~~~~~~-- 257 (408)
T d1n11a_ 189 GSPHS-PAWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGH-------AEMVALLLSKQANG-- 257 (408)
T ss_dssp CCSCC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC-------HHHHHHHHTTTCCT--
T ss_pred Ccccc-cCCCCCCcchhhhccchhhhhhhhhhccccc-cccCCCCCCHHHHHHHhCc-------HhHhhhhhcccccc--
Confidence 98888 8999999999999999999999998876654 5667889999999998742 12222111110000
Q ss_pred cccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhH
Q 006942 210 ELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRT 289 (624)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~ 289 (624)
...+..+. ...+.+...++...
T Consensus 258 -----------------------------~~~~~~g~-----------------------------~~l~~a~~~~~~~i 279 (408)
T d1n11a_ 258 -----------------------------NLGNKSGL-----------------------------TPLHLVAQEGHVPV 279 (408)
T ss_dssp -----------------------------TCCCTTCC-----------------------------CHHHHHHHHTCHHH
T ss_pred -----------------------------ccccCCCC-----------------------------ChhhhhhhcCcHHH
Confidence 00000000 01233334455555
Q ss_pred HHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCc
Q 006942 290 VEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNF 369 (624)
Q Consensus 290 ~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~ 369 (624)
+++|. +...... ..+..+.||||.|+..++.++++.+++. +.++...|.+|+||||+|+++|+.+++++|+++|
T Consensus 280 ~~~Ll---~~g~~~~-~~~~~~~t~L~~~~~~~~~~~~~~ll~~-g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~G- 353 (408)
T d1n11a_ 280 ADVLI---KHGVMVD-ATTRMGYTPLHVASHYGNIKLVKFLLQH-QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG- 353 (408)
T ss_dssp HHHHH---HHTCCTT-CCCSSCCCHHHHHHHSSCSHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-
T ss_pred HHHHH---HCCCccc-cccccccccchhhcccCcceeeeeeccc-cccccccCCCCCCHHHHHHHcCCHHHHHHHHHCC-
Confidence 55543 3322112 2556779999999999999999999999 9888777999999999999999999999999999
Q ss_pred cccccccccCCCCchhhhhhhcCCCC
Q 006942 370 TTFLFSSRDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 370 ~~~~vn~~D~~GnTpLHlAa~~~~~~ 395 (624)
..+|.+|++|+||||+|++.|+.+
T Consensus 354 --Ad~n~~d~~G~t~L~~A~~~~~~~ 377 (408)
T d1n11a_ 354 --ASPNEVSSDGTTPLAIAKRLGYIS 377 (408)
T ss_dssp --CCSCCCCSSSCCHHHHHHHTTCHH
T ss_pred --CCCCCCCCCCCCHHHHHHHcCCHH
Confidence 667799999999999999999853
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-33 Score=267.68 Aligned_cols=143 Identities=17% Similarity=0.207 Sum_probs=115.6
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPV 110 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPL 110 (624)
+++|+.+|. .| +.+.|+.+++.. +.+++.+|.+|+||||+||..|+.+++++|++.... ....+..+.+|+
T Consensus 4 ~~~~~~~a~----~G---~~~~v~~~l~~~-~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~-~~~~~~~~~~~~ 74 (223)
T d1uoha_ 4 NLMVCNLAY----SG---KLEELKESILAD-KSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSPL 74 (223)
T ss_dssp SSHHHHHHH----TT---CHHHHHHHHHHC-GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-SCCCCTTCCCHH
T ss_pred HHHHHHHHH----hC---CHHHHHHHHHhC-CCcCcCcCCCCCCHHHHHHHhhhhcccccccccccc-cccccccccccc
Confidence 688888888 88 888888877764 677888888888888888888888888888888776 445666788888
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcC
Q 006942 111 HDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQK 184 (624)
Q Consensus 111 h~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~ 184 (624)
+.|+..|+.+++++|++++.+.+. .|.+|.||||+|+..|+.++++.|++++.++ +.+|.+|.||||+|+..
T Consensus 75 ~~~~~~~~~~i~~~Ll~~~~d~~~-~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~-~~~~~~~~t~L~~a~~~ 146 (223)
T d1uoha_ 75 HIAASAGRDEIVKALLGKGAQVNA-VNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYEATAMHRAAAK 146 (223)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred cccccccccchhHHHhccCceeEe-eCCCCCchhhHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCccchhhhhc
Confidence 888888888888888888887777 7888888888888888888888888876654 45666677777776655
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-32 Score=260.18 Aligned_cols=211 Identities=19% Similarity=0.153 Sum_probs=183.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Q 006942 72 GHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAAN 151 (624)
Q Consensus 72 G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~ 151 (624)
+++.||.+|+.|+.+.|+.+++.++..++.+|.+|.||||+||..|+.+++++|++....... .+..+.++++.++..+
T Consensus 3 ~~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~ 81 (223)
T d1uoha_ 3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND-KDDAGWSPLHIAASAG 81 (223)
T ss_dssp SSSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCC-CCTTCCCHHHHHHHHT
T ss_pred CHHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhccccccccccccccc-cccccccccccccccc
Confidence 578999999999999999999999888999999999999999999999999999999988877 7889999999999999
Q ss_pred cHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhh
Q 006942 152 LYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFI 231 (624)
Q Consensus 152 ~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (624)
+.++++.|++++.++ +.+|.+|.||||+|+..++
T Consensus 82 ~~~i~~~Ll~~~~d~-~~~d~~g~tpL~~A~~~~~--------------------------------------------- 115 (223)
T d1uoha_ 82 RDEIVKALLGKGAQV-NAVNQNGCTPLHYAASKNR--------------------------------------------- 115 (223)
T ss_dssp CHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTC---------------------------------------------
T ss_pred ccchhHHHhccCcee-EeeCCCCCchhhHHHHcCC---------------------------------------------
Confidence 999999999998765 6789999999999997642
Q ss_pred hhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccc
Q 006942 232 VTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQL 311 (624)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g 311 (624)
.++++.+.+...+... .+..|
T Consensus 116 ----------------------------------------------------------~e~~~~Ll~~g~d~~~-~~~~~ 136 (223)
T d1uoha_ 116 ----------------------------------------------------------HEIAVMLLEGGANPDA-KDHYE 136 (223)
T ss_dssp ----------------------------------------------------------HHHHHHHHHTTCCTTC-CCTTS
T ss_pred ----------------------------------------------------------HHHHHHHHHCCCCCCC-cCCCC
Confidence 1222223333221122 67788
Q ss_pred cHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhc
Q 006942 312 SVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRL 391 (624)
Q Consensus 312 ~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~ 391 (624)
.||||+|+..|+.++++.|++. +.++...|..|+||||+|+.+|+.+++++|++.| .+++.+|.+|+||||+|+ .
T Consensus 137 ~t~L~~a~~~~~~~~~~~L~~~-~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~G---ad~~~~d~~g~tpl~~A~-~ 211 (223)
T d1uoha_ 137 ATAMHRAAAKGNLKMIHILLYY-KASTNIQDTEGNTPLHLACDEERVEEAKLLVSQG---ASIYIENKEEKTPLQVAK-G 211 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCSCCCCTTSCCHHHHCC-T
T ss_pred CccchhhhhcCCcchhhhhccc-cceeeeccCCCCceeccccccCcHHHHHHHHHCC---CCCCCCCCCCCCHHHHHH-C
Confidence 9999999999999999999999 8887766999999999999999999999999998 667799999999999984 3
Q ss_pred CC
Q 006942 392 VP 393 (624)
Q Consensus 392 ~~ 393 (624)
|+
T Consensus 212 ~~ 213 (223)
T d1uoha_ 212 GL 213 (223)
T ss_dssp TH
T ss_pred CC
Confidence 44
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=100.00 E-value=1.9e-33 Score=281.63 Aligned_cols=258 Identities=17% Similarity=0.207 Sum_probs=204.2
Q ss_pred CHHHHHHHHHcCcccc-------ccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHH
Q 006942 6 DWQGVEDFVTNHPDAL-------TAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATL 78 (624)
Q Consensus 6 ~~~~v~~ll~~~~~~~-------~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~ 78 (624)
..+.++.++....... ..+++.+| .||||.||+ .| +.++|++|++.| ++++.+|.+|.||||+
T Consensus 10 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~l~~A~~----~G---~~~~v~~Ll~~G--advn~~d~~G~T~L~~ 79 (291)
T d1s70b_ 10 RNEQLKRWIGSETDLEPPVVKRKKTKVKFDD-GAVFLAACS----SG---DTEEVLRLLERG--ADINYANVDGLTALHQ 79 (291)
T ss_dssp HHHHHHHHHHTTTSSCCSCCCCSCCCCEECH-HHHHHHHHH----HT---CHHHHHHHHHHC--CCTTCBCTTCCBHHHH
T ss_pred hHHHHHHHHhCcccccCchhhccccccCCCC-chHHHHHHH----cC---CHHHHHHHHHCC--CCCCccCCCCCcHHHH
Confidence 3466666666543311 11223445 799999999 99 999999999998 7789999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHH
Q 006942 79 SAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALD 158 (624)
Q Consensus 79 Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~ 158 (624)
|+..|+.++|++|++++++ ....+..+.||||+|+..|+.++++.|++.+..... .+.+|.+++++|+..++.+.+..
T Consensus 80 A~~~g~~eiv~~Ll~~~~~-~~~~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~ 157 (291)
T d1s70b_ 80 ACIDDNVDMVKFLVENGAN-INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGA-VNSEGDTPLDIAEEEAMEELLQN 157 (291)
T ss_dssp HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCCSHHHHHHHHH
T ss_pred HHhcCCceeeeeecccccc-cccccccccccccccccccccchhhcccccCccccc-ccccCccccccccccccchhccc
Confidence 9999999999999999887 677888999999999999999999999999988877 89999999999999999999999
Q ss_pred HHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccC
Q 006942 159 LLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHS 238 (624)
Q Consensus 159 Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (624)
++.............+..+.+..
T Consensus 158 ll~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------------- 180 (291)
T d1s70b_ 158 EVNRQGVDIEAARKEEERIMLRD--------------------------------------------------------- 180 (291)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHH---------------------------------------------------------
T ss_pred ccccccccccccccccccccccc---------------------------------------------------------
Confidence 88764322111000000000000
Q ss_pred cccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHH
Q 006942 239 KESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAA 318 (624)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~A 318 (624)
....+.. .... ....+..|.||||.|
T Consensus 181 --------------------------------------------------~~~~~~~--~~~~--~~~~~~~g~t~L~~a 206 (291)
T d1s70b_ 181 --------------------------------------------------ARQWLNS--GHIN--DVRHAKSGGTALHVA 206 (291)
T ss_dssp --------------------------------------------------HHHHHHH--TCCC--CCCCTTTCCCHHHHH
T ss_pred --------------------------------------------------chhhhcc--cccc--cccccCCCCChhhHH
Confidence 0000000 0001 223667889999999
Q ss_pred HHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhh
Q 006942 319 AILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGR 390 (624)
Q Consensus 319 a~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~ 390 (624)
+..|+.++++.|++. ++++...|..|+||||+|+..|+.+++++|+++| .++|.+|++|+||||+|++
T Consensus 207 ~~~~~~~~~~~Ll~~-g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~G---adv~~~d~~G~TaL~~A~e 274 (291)
T d1s70b_ 207 AAKGYTEVLKLLIQA-RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL---CDMEAVNKVGQTAFDVADE 274 (291)
T ss_dssp HHHTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCTTTSCCS
T ss_pred HHcCChhhhcccccc-eecccccccCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHH
Confidence 999999999999999 9888766999999999999999999999999998 5677999999999999985
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.1e-32 Score=270.44 Aligned_cols=234 Identities=18% Similarity=0.116 Sum_probs=172.6
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHhcCC--CCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcH
Q 006942 66 ARQDNHGHTAATLSAAKGNLRALKLLVKYNP--DLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANV 143 (624)
Q Consensus 66 ~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~--~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~ 143 (624)
...|++|+||||+||+.|+.+++++|+++++ ..++.+|..|.||||+||..|+.+++++|++++++++. +|.+|.||
T Consensus 3 ~~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~-~d~~g~tp 81 (255)
T d1oy3d_ 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLV-AERGGHTA 81 (255)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTSCCH
T ss_pred ccCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccc-cccccchh
Confidence 4578999999999999999999999999854 45678899999999999999999999999999999988 89999999
Q ss_pred HHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCC
Q 006942 144 LSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDL 223 (624)
Q Consensus 144 Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 223 (624)
||+|+..++.++++.|++.................. ...+.. ......+..
T Consensus 82 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~-------------------- 132 (255)
T d1oy3d_ 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQ--DCTPDT-------SHAPAAVDS-------------------- 132 (255)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------------------------
T ss_pred hhhhhccCchHHHHHHHhhccchhcccchhhhhHHh--hhcccc-------hHHHHHHHh--------------------
Confidence 999999999999999988754322111110000000 000000 000000000
Q ss_pred CCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccc
Q 006942 224 DGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWT 303 (624)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~ 303 (624)
..................
T Consensus 133 --------------------------------------------------------------~~~~~~~~~~~~~~~~~~ 150 (255)
T d1oy3d_ 133 --------------------------------------------------------------QPNPENEEEPRDEDWRLQ 150 (255)
T ss_dssp -------------------------------------------------------------------------CCCGGGG
T ss_pred --------------------------------------------------------------hcchhHHHHHHhhhcCcc
Confidence 000000000000000000
Q ss_pred cccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceec-CCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCC
Q 006942 304 NFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWS-NQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGN 382 (624)
Q Consensus 304 ~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~-d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~Gn 382 (624)
....+..|.||||+|+..|+.++++.|++. +++.... +..|+||||+|++.++.+++++|++++ ..+|.+|++|+
T Consensus 151 in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~g---adin~~d~~g~ 226 (255)
T d1oy3d_ 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDA-GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG---ADPTARMYGGR 226 (255)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSC
T ss_pred cccccccCcccccccccccccccccchhcc-cccccccccccccccccccccccHHHHHHHHHHCC---CCCCCCCCCCC
Confidence 113678899999999999999999999999 9998887 899999999999999999999999988 66789999999
Q ss_pred chhhhhhhcCCCC
Q 006942 383 NILHLAGRLVPSS 395 (624)
Q Consensus 383 TpLHlAa~~~~~~ 395 (624)
||||+|++.++.+
T Consensus 227 t~L~~A~~~~~~~ 239 (255)
T d1oy3d_ 227 TPLGSALLRPNPI 239 (255)
T ss_dssp CHHHHHHTSSCHH
T ss_pred CHHHHHHHCCCHH
Confidence 9999999999854
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.98 E-value=4.6e-33 Score=276.34 Aligned_cols=256 Identities=14% Similarity=0.077 Sum_probs=194.9
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCC-CCCChHHHHHHHcCCHHHHHHHH--------hcCCCCccc
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQD-NHGHTAATLSAAKGNLRALKLLV--------KYNPDLTNI 101 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d-~~G~TpLh~Aa~~g~~~iv~~Ll--------~~~~~l~~~ 101 (624)
+||||+|++ ..| +.++++.|.+.+ ++..| ++|.||||+||..|+.++|+.|+ +.|++ ++.
T Consensus 1 ~~p~~~~~~---~~~---~~~~~~~l~~~~----~n~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gad-vn~ 69 (277)
T d2fo1e1 1 ESPIKLHTE---AAG---SYAITEPITRES----VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD-VNA 69 (277)
T ss_dssp CCCCHHHHH---HHS---SSCCCSCCSTTT----TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC-TTC
T ss_pred CChHHHHHH---hCC---CHHHHHHHHhcC----CCcCCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCC-ccc
Confidence 589998877 145 667777666653 34444 46999999999999999998875 44666 788
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCC--CCCcccCCCCCCHHH
Q 006942 102 RHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHP--TIGRDSIDSRRIILN 179 (624)
Q Consensus 102 ~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~--~l~~~~d~~G~TpLh 179 (624)
+|.+|.||||+|+..|+.+++++|+++|++++. ++.+|.||||.|+..++.++...+..... ......+..+.++.+
T Consensus 70 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~-~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 148 (277)
T d2fo1e1 70 MDCDENTPLMLAVLARRRRLVAYLMKAGADPTI-YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALM 148 (277)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHH
T ss_pred cCCCCCeeecccccccccccccccccccccccc-ccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHH
Confidence 999999999999999999999999999999888 89999999999999999999988875532 223456778889999
Q ss_pred HHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhH
Q 006942 180 TLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLH 259 (624)
Q Consensus 180 ~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (624)
.+....... .+..........
T Consensus 149 ~~~~~~~~~----~~~~~~~~~~~~------------------------------------------------------- 169 (277)
T d2fo1e1 149 IVAHNEGRD----QVASAKLLVEKG------------------------------------------------------- 169 (277)
T ss_dssp HHHHSCSTT----HHHHHHHHHHHT-------------------------------------------------------
T ss_pred HHHhccccc----cccccccccccc-------------------------------------------------------
Confidence 887653210 000000000000
Q ss_pred HHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCce
Q 006942 260 KLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSN 339 (624)
Q Consensus 260 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~ 339 (624)
...... ........+..|.||||.++..|+.++++.++.. .+...
T Consensus 170 --------~~~~~~--------------------------~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~-~~~~~ 214 (277)
T d2fo1e1 170 --------AKVDYD--------------------------GAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE-KGSNK 214 (277)
T ss_dssp --------CCSSCC--------------------------SGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH-SCCCT
T ss_pred --------cccccc--------------------------ccccccccccCCCCcccccccccccccccccccc-ccccc
Confidence 000000 0000112566789999999999999999988776 56555
Q ss_pred ec-CCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCC
Q 006942 340 WS-NQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 340 ~~-d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 395 (624)
.. |..|+||||+|+++|+.+++++|+++| .++|.+|.+|+||||+|++.|+.+
T Consensus 215 ~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~g---adin~~d~~G~T~L~~A~~~~~~~ 268 (277)
T d2fo1e1 215 DKQDEDGKTPIMLAAQEGRIEVVMYLIQQG---ASVEAVDATDHTARQLAQANNHHN 268 (277)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCSSCCCSSSCCHHHHHHHTTCHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHCc---CCCCCcCCCCCCHHHHHHHcCCHH
Confidence 55 999999999999999999999999998 667899999999999999999853
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=3.5e-31 Score=255.10 Aligned_cols=210 Identities=16% Similarity=0.182 Sum_probs=172.1
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCC--CcccCCCCCCh
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPD--LTNIRHGEGFL 108 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~--l~~~~n~~G~T 108 (624)
+||||.||+ .| +.+.|+.|++.. +.+++.+|.+|.||||+|+..|+.+++++|++++++ .....|..|.|
T Consensus 1 n~pLh~A~~----~g---~~~~v~~Ll~~~-~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~ 72 (229)
T d1ixva_ 1 NYPLHQACM----EN---EFFKVQELLHSK-PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWT 72 (229)
T ss_dssp CCHHHHHHH----HT---CHHHHHHHHHHC-GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCC
T ss_pred CHhHHHHHH----cC---CHHHHHHHHHcC-CCcccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccc
Confidence 489999999 99 999999988874 577888999999999999999999999999988654 34567778889
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCCCccc-cCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCC
Q 006942 109 PVHDAALYGHKDTFHYLLEVTHGVDIY-SGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYA 187 (624)
Q Consensus 109 PLh~Aa~~g~~~iv~~Ll~~~~~~~~~-~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~ 187 (624)
|+|+|+..+..++++.++..+...... .+..+.|+++.++..++.+++..|++.+... ..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~------------------ 133 (229)
T d1ixva_ 73 PFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RI------------------ 133 (229)
T ss_dssp HHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CC------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccc-cc------------------
Confidence 999999999999998888877654332 6777888999998888888888888765432 11
Q ss_pred CCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhh
Q 006942 188 FASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWN 267 (624)
Q Consensus 188 ~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (624)
T Consensus 134 -------------------------------------------------------------------------------- 133 (229)
T d1ixva_ 134 -------------------------------------------------------------------------------- 133 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceec-CCCCC
Q 006942 268 AXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWS-NQDGH 346 (624)
Q Consensus 268 ~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~-d~~G~ 346 (624)
.+..|.||||+|+..|+.++++.|++. +++..+. |.+|+
T Consensus 134 ---------------------------------------~~~~g~t~l~~a~~~~~~~~~~~Ll~~-~~~~in~~d~~g~ 173 (229)
T d1ixva_ 134 ---------------------------------------KDKFNQIPLHRAASVGSLKLIELLCGL-GKSAVNWQDKQGW 173 (229)
T ss_dssp ---------------------------------------CCTTSCCHHHHHHHHTCHHHHHHHHTT-TCCCSCCCCTTSC
T ss_pred ---------------------------------------cCCCCCCccchhhhccccccccccccc-ccccccccccccC
Confidence 345567888888888889999999998 8766666 99999
Q ss_pred cHHHHHHHcCChhHHHHHhcC-CccccccccccCCCCchhhhhhh
Q 006942 347 TIFDHAVLYRREKVFNLIQGV-NFTTFLFSSRDKAGNNILHLAGR 390 (624)
Q Consensus 347 T~Lh~A~~~~~~~iv~~Ll~~-~~~~~~vn~~D~~GnTpLHlAa~ 390 (624)
||||+|+.+|+.+++++|++. | .+++.+|++|+||||+|+.
T Consensus 174 TpLh~A~~~~~~~~v~~Ll~~~g---ad~~~~d~~g~t~l~~A~~ 215 (229)
T d1ixva_ 174 TPLFHALAEGHGDAAVLLVEKYG---AEYDLVDNKGAKAEDVALN 215 (229)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHC---CCSCCCCTTSCCTGGGCSC
T ss_pred CchhhhcccccHHHHHHHHHhcC---CCCCCcCCCCCCHHHHHhh
Confidence 999999999999999999864 6 4577999999999999984
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.7e-29 Score=248.93 Aligned_cols=268 Identities=16% Similarity=0.116 Sum_probs=154.5
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCC-CCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQD-NHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLP 109 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d-~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TP 109 (624)
+|+||.|++ .| +.++|++|++.| .+++.++ ..|.||||+|+..|+.+++++|++.++. ....+..+.+|
T Consensus 6 ~~~L~~Ai~----~~---~~e~vk~Ll~~G--~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~-~~~~~~~~~~~ 75 (285)
T d1wdya_ 6 NHLLIKAVQ----NE---DVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATP 75 (285)
T ss_dssp HHHHHHHHH----TT---CHHHHHHHHHTT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCH
T ss_pred cHHHHHHHH----cC---CHHHHHHHHHCC--CCcCccCCCCCCCHHHHHHHcCCHHHhhhhcccccc-ccccccccchh
Confidence 566666666 66 666666666665 4444433 3466666666666666666666666555 44455556666
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCc---------ccCCCCCCHHHH
Q 006942 110 VHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGR---------DSIDSRRIILNT 180 (624)
Q Consensus 110 Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~---------~~d~~G~TpLh~ 180 (624)
.+.|+..+..+...++++....... .+..|.|+++.|+..++...+..++....+... ..+..|.||||+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 154 (285)
T d1wdya_ 76 FLLAAIAGSVKLLKLFLSKGADVNE-CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMD 154 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHH
T ss_pred hHHHhhcCCccccchhhhhcccccc-cccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHH
Confidence 6666666666666666666555444 556666666666666666666666654433211 123446666666
Q ss_pred HHcCCCCCCCCCcchhhhhhhhcc-ccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhH
Q 006942 181 LAQKPYAFASGSRLGRLQRLIYNC-IPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLH 259 (624)
Q Consensus 181 Aa~~~~~~~~~~~l~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (624)
|+++++ ...++.++.+. ..++ .....+..+....
T Consensus 155 A~~~~~-------~~~~~~Ll~~~~~~i~-------------------------------~~~~~~~~~~~~~------- 189 (285)
T d1wdya_ 155 AAEKGH-------VEVLKILLDEMGADVN-------------------------------ACDNMGRNALIHA------- 189 (285)
T ss_dssp HHHHTC-------HHHHHHHHHTSCCCTT-------------------------------CCCTTSCCHHHHH-------
T ss_pred HHHcCC-------HHHHHHHHhccCCCcc-------------------------------cccCCCCcccccc-------
Confidence 665532 22222222110 0000 0000000000000
Q ss_pred HHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCce
Q 006942 260 KLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSN 339 (624)
Q Consensus 260 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~ 339 (624)
... ........+++.+.+...+.+ ..+..|.||||.|++.|+.++|+.||+..+.++.
T Consensus 190 -------------------~~~--~~~~~~~~i~~~Li~~ga~~n-~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din 247 (285)
T d1wdya_ 190 -------------------LLS--SDDSDVEAITHLLLDHGADVN-VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN 247 (285)
T ss_dssp -------------------HHC--SCTTTHHHHHHHHHHTTCCSS-CCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTT
T ss_pred -------------------ccc--ccchHHHHHHHHHHHCCCCCC-ccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCc
Confidence 000 001112234444444433222 3677889999999999999999999986144554
Q ss_pred ecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccC
Q 006942 340 WSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDK 379 (624)
Q Consensus 340 ~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~ 379 (624)
..|.+|+||||+|+++|+.+++++|+++| +++|++|.
T Consensus 248 ~~d~~G~TpL~~A~~~~~~eiv~~Ll~~G---Ad~n~~d~ 284 (285)
T d1wdya_ 248 DTDSDGKTALLLAVELKLKKIAELLCKRG---ASTDCGDL 284 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHS---SCSCCSSC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCcccC
Confidence 44999999999999999999999999999 66777773
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.96 E-value=8.1e-30 Score=252.66 Aligned_cols=227 Identities=18% Similarity=0.162 Sum_probs=179.4
Q ss_pred CCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccC------chhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcc
Q 006942 27 EPGSMTIFHMIVELLIDAESDEAICLLDKLASKVD------PETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTN 100 (624)
Q Consensus 27 ~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~------~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~ 100 (624)
++| +||||+||. .| +.++|+.|+.+.. .+++|.+|.+|+||||+|+..|+.++|++|++++++ ++
T Consensus 31 ~~g-~T~Lh~A~~----~g---~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad-~n 101 (277)
T d2fo1e1 31 RHN-RTVLHWIAS----NS---SAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD-PT 101 (277)
T ss_dssp SSC-CCHHHHHHC----TT---CCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SC
T ss_pred CCC-ccHHHHHHH----cC---CHHHHHHHHhcchhHHHHcCCCccccCCCCCeeeccccccccccccccccccccc-cc
Confidence 468 999999999 99 9999988875421 257899999999999999999999999999999998 88
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHhcC---CCccccCCCCCcHHHHHHHhCcHH---HHHHHHHhCCCC-------C
Q 006942 101 IRHGEGFLPVHDAALYGHKDTFHYLLEVTH---GVDIYSGKDGANVLSFLIAANLYD---VALDLLKRHPTI-------G 167 (624)
Q Consensus 101 ~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~---~~~~~~~~~G~t~Lh~A~~~~~~~---~v~~Ll~~~~~l-------~ 167 (624)
.+|.+|.||||+|+..++.++++++..... .... .+..+.++.+.+...+..+ .+..+.+..... .
T Consensus 102 ~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (277)
T d2fo1e1 102 IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE-LDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180 (277)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC-CCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGT
T ss_pred cccccccccccchhhhcchhhhhhhhhcccccccccc-cccccchhHHHHHhcccccccccccccccccccccccccccc
Confidence 899999999999999999999999987653 2333 7888999999999877544 344444443221 2
Q ss_pred cccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCC
Q 006942 168 RDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGST 247 (624)
Q Consensus 168 ~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (624)
...+..|.||||.++..++ ..
T Consensus 181 ~~~~~~g~t~L~~~~~~~~-------~~---------------------------------------------------- 201 (277)
T d2fo1e1 181 DSEKYKGRTALHYAAQVSN-------MP---------------------------------------------------- 201 (277)
T ss_dssp SSSSCCCCCTHHHHHSSCC-------HH----------------------------------------------------
T ss_pred cccccCCCCcccccccccc-------cc----------------------------------------------------
Confidence 3446779999999987642 00
Q ss_pred cchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHH
Q 006942 248 QQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVV 327 (624)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv 327 (624)
....+ +..... .....+..|.||||+|++.|+.++|
T Consensus 202 -----------------------------------------~~~~~--l~~~~~-~~~~~d~~g~tpL~~A~~~g~~~iv 237 (277)
T d2fo1e1 202 -----------------------------------------IVKYL--VGEKGS-NKDKQDEDGKTPIMLAAQEGRIEVV 237 (277)
T ss_dssp -----------------------------------------HHHHH--HHHSCC-CTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred -----------------------------------------ccccc--cccccc-cccccCCCCCCHHHHHHHcCCHHHH
Confidence 00000 001111 0223678899999999999999999
Q ss_pred HHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcC
Q 006942 328 NEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGV 367 (624)
Q Consensus 328 ~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 367 (624)
++|++. |+++...|.+|+||||+|+++|+.+++++|.++
T Consensus 238 ~~Ll~~-gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~c 276 (277)
T d2fo1e1 238 MYLIQQ-GASVEAVDATDHTARQLAQANNHHNIVDIFDRC 276 (277)
T ss_dssp HHHHHT-TCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred HHHHHC-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 999999 999876799999999999999999999999875
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.1e-29 Score=246.87 Aligned_cols=260 Identities=13% Similarity=0.072 Sum_probs=183.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Q 006942 71 HGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAA 150 (624)
Q Consensus 71 ~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~ 150 (624)
+++|+||.|++.|+.++|++|+++++++-...+..|.||||+|+..|+.+++++|++.+..... .+..+.+|.+.+...
T Consensus 4 ~~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~-~~~~~~~~~~~~~~~ 82 (285)
T d1wdya_ 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL-RKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHH
T ss_pred CCcHHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccc-cccccchhhHHHhhc
Confidence 4679999999999999999999999983334456799999999999999999999999998887 788999999999999
Q ss_pred CcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhh
Q 006942 151 NLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESF 230 (624)
Q Consensus 151 ~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (624)
+..+.....++...+. ...+..|.|+++.++..+.... . ...+...... +........
T Consensus 83 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~a~~~~~~~~------~-~~~~~~~~~~--------------~~~~~~~~~ 140 (285)
T d1wdya_ 83 GSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKA------L-KFLYKRGANV--------------NLRRKTKED 140 (285)
T ss_dssp TCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTCHHH------H-HHHHHTTCCT--------------TCCCCCCHH
T ss_pred CCccccchhhhhcccc-cccccCCCchhHHHHHhcchhh------h-hhhhhhcccc--------------cccccchhh
Confidence 9999999999886654 4567889999999998864321 1 1111111000 000000000
Q ss_pred hhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCcc
Q 006942 231 IVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQ 310 (624)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~ 310 (624)
.......+ .....++...++...++.| .+.........+..
T Consensus 141 ----------------------------------~~~~~~~g--~t~L~~A~~~~~~~~~~~L---l~~~~~~i~~~~~~ 181 (285)
T d1wdya_ 141 ----------------------------------QERLRKGG--ATALMDAAEKGHVEVLKIL---LDEMGADVNACDNM 181 (285)
T ss_dssp ----------------------------------HHHTTCCC--CCHHHHHHHHTCHHHHHHH---HHTSCCCTTCCCTT
T ss_pred ----------------------------------hhhhcccC--chHHHHHHHcCCHHHHHHH---HhccCCCcccccCC
Confidence 00000000 0112334444554454443 32211111124566
Q ss_pred ccHHHHHHHH----cCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhh
Q 006942 311 LSVAMLAAAI----LGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILH 386 (624)
Q Consensus 311 g~tpLh~Aa~----~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLH 386 (624)
|.++++.+.. .+..++++.|+++ ++++...|..|+||||.|+++|+.+++++|++... .++|.+|.+|+||||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~i~~~Li~~-ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g--~din~~d~~G~TpL~ 258 (285)
T d1wdya_ 182 GRNALIHALLSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH--IEINDTDSDGKTALL 258 (285)
T ss_dssp SCCHHHHHHHCSCTTTHHHHHHHHHHT-TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSS--CCTTCCCTTSCCHHH
T ss_pred CCcccccccccccchHHHHHHHHHHHC-CCCCCccCCCCCCccchhhhcCcHHHHHHHHHcCC--CCCcCCCCCCCCHHH
Confidence 6666665543 3345799999999 99877669999999999999999999999997542 458899999999999
Q ss_pred hhhhcCCCC
Q 006942 387 LAGRLVPSS 395 (624)
Q Consensus 387 lAa~~~~~~ 395 (624)
+|++.|+.+
T Consensus 259 ~A~~~~~~e 267 (285)
T d1wdya_ 259 LAVELKLKK 267 (285)
T ss_dssp HHHHTTCHH
T ss_pred HHHHcCCHH
Confidence 999999854
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.9e-29 Score=236.96 Aligned_cols=84 Identities=10% Similarity=-0.052 Sum_probs=73.3
Q ss_pred CCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhh
Q 006942 307 NSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILH 386 (624)
Q Consensus 307 ~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLH 386 (624)
....+.+||+.|+..+..++++.+++. +.+....|..|+||||+|+.+|+.+++++|+++| .++|.+|.+|+||||
T Consensus 140 ~~~~~~~~l~~a~~~~~~~~~~~~~~~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~G---ad~n~~d~~G~TpL~ 215 (228)
T d1k1aa_ 140 DIKSGRSPLIHAVENNSLSMVQLLLQH-GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG---ADSSLKNCHNDTPLM 215 (228)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCTTT
T ss_pred cccchhhHHHHHHHhhhhhhhhhhhhh-ccccccccccCcchHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCCHHH
Confidence 344567888888888999999999998 7777766999999999999999999999999998 567799999999999
Q ss_pred hhhhcCCC
Q 006942 387 LAGRLVPS 394 (624)
Q Consensus 387 lAa~~~~~ 394 (624)
+|++.|+.
T Consensus 216 ~A~~~~~~ 223 (228)
T d1k1aa_ 216 VARSRRVI 223 (228)
T ss_dssp TCSSHHHH
T ss_pred HHHhCCCc
Confidence 99988763
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=6.7e-29 Score=238.97 Aligned_cols=218 Identities=18% Similarity=0.123 Sum_probs=187.1
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCch-hhccCCCCCChHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPE-TLARQDNHGHTAATLS 79 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~-~~~~~d~~G~TpLh~A 79 (624)
||.+|+.+.++.+++..+..++.+ |.+| +||||+||. .| +.++|++|++.+.+. ..+..+..|.||+|+|
T Consensus 7 A~~~g~~~~v~~Ll~~~~~~~~~~-d~~G-~TpL~~A~~----~g---~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 77 (229)
T d1ixva_ 7 ACMENEFFKVQELLHSKPSLLLQK-DQDG-RIPLHWSVS----FQ---AHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 77 (229)
T ss_dssp HHHHTCHHHHHHHHHHCGGGTTCC-CTTS-CCHHHHHHH----TT---CHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCccccc-CCCC-CCHHHHHHH----cC---Cccccchhhhhhcccccccccccccccccccc
Confidence 688999999999999998888887 9999 999999999 99 999999999997432 2456788999999999
Q ss_pred HHcCCHHHHHHHHhcCCC-CcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHH
Q 006942 80 AAKGNLRALKLLVKYNPD-LTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALD 158 (624)
Q Consensus 80 a~~g~~~iv~~Ll~~~~~-l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~ 158 (624)
+..+..++++.++..+.. .....+..+.||++.++..++.+++++|++.+..... ++.+|+||||+|+..|+.++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~ 156 (229)
T d1ixva_ 78 CSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRI-KDKFNQIPLHRAASVGSLKLIEL 156 (229)
T ss_dssp HHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccc-cCCCCCCccchhhhccccccccc
Confidence 999999999999988654 2456778899999999999999999999999998888 89999999999999999999999
Q ss_pred HHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccC
Q 006942 159 LLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHS 238 (624)
Q Consensus 159 Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (624)
|++.++...+.
T Consensus 157 Ll~~~~~~in~--------------------------------------------------------------------- 167 (229)
T d1ixva_ 157 LCGLGKSAVNW--------------------------------------------------------------------- 167 (229)
T ss_dssp HHTTTCCCSCC---------------------------------------------------------------------
T ss_pred ccccccccccc---------------------------------------------------------------------
Confidence 99876543332
Q ss_pred cccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHH
Q 006942 239 KESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAA 318 (624)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~A 318 (624)
.+.+|.||||+|
T Consensus 168 --------------------------------------------------------------------~d~~g~TpLh~A 179 (229)
T d1ixva_ 168 --------------------------------------------------------------------QDKQGWTPLFHA 179 (229)
T ss_dssp --------------------------------------------------------------------CCTTSCCHHHHH
T ss_pred --------------------------------------------------------------------cccccCCchhhh
Confidence 344567777777
Q ss_pred HHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 319 AILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 319 a~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
+.+|+.++|++|++++|.++...|.+|+||||+|+. .+++++|+++|
T Consensus 180 ~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g 226 (229)
T d1ixva_ 180 LAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNV 226 (229)
T ss_dssp HHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHC
T ss_pred cccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh---HHHHHHHHHcC
Confidence 788888999999964266776559999999999984 58999999887
|
| >d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: I-kappa-B-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.4e-29 Score=239.99 Aligned_cols=194 Identities=15% Similarity=0.156 Sum_probs=158.6
Q ss_pred CCCchHHHHHHhhhhhcCCcchHHHHHHHHHccC--chhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCC
Q 006942 28 PGSMTIFHMIVELLIDAESDEAICLLDKLASKVD--PETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 28 ~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~--~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
+| +||||+|+. .| +.++++.|++... ..+++.+|.+|+||||+||..|+.+++++|++++++ ++.+|..
T Consensus 1 dG-~t~Lh~A~~----~g---~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d-~~~~d~~ 71 (221)
T d1iknd_ 1 DG-DSFLHLAII----HE---EKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PELRDFR 71 (221)
T ss_dssp CC-CCTTHHHHH----TT---CSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCCCCTT
T ss_pred CC-ChHHHHHHH----cC---CHHHHHHHHHHHHhCCCCcccCCCCCCcccccccccccccccccccccccc-ccccccc
Confidence 57 999999999 99 8665555554321 256888999999999999999999999999999888 7888999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccc-----cCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHH
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIY-----SGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNT 180 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~-----~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~ 180 (624)
|.||||+|+..|+.++++.|++.+...... ...+|.||||.|+..++.+.+..++..+..+..
T Consensus 72 g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~------------ 139 (221)
T d1iknd_ 72 GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA------------ 139 (221)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTC------------
T ss_pred cccccccccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCccccc------------
Confidence 999999999999999999999876543221 556678888888888888888888776554321
Q ss_pred HHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHH
Q 006942 181 LAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHK 260 (624)
Q Consensus 181 Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (624)
T Consensus 140 -------------------------------------------------------------------------------- 139 (221)
T d1iknd_ 140 -------------------------------------------------------------------------------- 139 (221)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCcee
Q 006942 261 LHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNW 340 (624)
Q Consensus 261 ~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~ 340 (624)
+.+.+|.||||+|+..|+.+++++|+++ |+|+..
T Consensus 140 ---------------------------------------------~~~~~G~T~L~~A~~~g~~~~v~~Ll~~-gad~~~ 173 (221)
T d1iknd_ 140 ---------------------------------------------QEPCNGRTALHLAVDLQNPDLVSLLLKC-GADVNR 173 (221)
T ss_dssp ---------------------------------------------CCTTTCCCHHHHHHHTTCHHHHHHHHTT-TCCSCC
T ss_pred ---------------------------------------------ccccCCCCccccccccccHHHHHHHHhc-CCcccc
Confidence 1445578888888899999999999999 999776
Q ss_pred cCCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 341 SNQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 341 ~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
.|.+|+||||+|+++++.+++++|++..
T Consensus 174 ~~~~G~tpl~~A~~~~~~~~~~~l~~~~ 201 (221)
T d1iknd_ 174 VTYQGYSPYQLTWGRPSTRIQQQLGQLT 201 (221)
T ss_dssp CCTTCCCGGGGCTTSSCHHHHHHHHTTS
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 6999999999999999999999999876
|
| >d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: I-kappa-B-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=4.7e-29 Score=238.95 Aligned_cols=186 Identities=14% Similarity=0.068 Sum_probs=159.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHh----cCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHH
Q 006942 71 HGHTAATLSAAKGNLRALKLLVK----YNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSF 146 (624)
Q Consensus 71 ~G~TpLh~Aa~~g~~~iv~~Ll~----~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~ 146 (624)
+|+||||+|+..|+.++++.|++ .+.+ ++.+|.+|+||||+||..|+.+++++|++.+++.+. +|.+|.||||.
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~-in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~-~d~~g~t~l~~ 78 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAF-LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPEL-RDFRGNTPLHL 78 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCC-CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC-CCTTCCCHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHHHHhCCCC-cccCCCCCCccccccccccccccccccccccccccc-ccccccccccc
Confidence 69999999999999876665554 4444 889999999999999999999999999999999888 89999999999
Q ss_pred HHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCc
Q 006942 147 LIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGD 226 (624)
Q Consensus 147 A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (624)
++..++.++++.+++..........
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~~~~~~------------------------------------------------------- 103 (221)
T d1iknd_ 79 ACEQGCLASVGVLTQSCTTPHLHSI------------------------------------------------------- 103 (221)
T ss_dssp HHHHTCHHHHHHHHHSTTTTSSSCG-------------------------------------------------------
T ss_pred ccccccccccchhhhhccccccccc-------------------------------------------------------
Confidence 9999999999999876432210000
Q ss_pred chhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhccccccc
Q 006942 227 IESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQ 306 (624)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~ 306 (624)
...
T Consensus 104 -----------------------------------------------------------------------------~~~ 106 (221)
T d1iknd_ 104 -----------------------------------------------------------------------------LKA 106 (221)
T ss_dssp -----------------------------------------------------------------------------GGC
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 001
Q ss_pred CCccccHHHHHHHHcCCHHHHHHHHHccCCCceec-CCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchh
Q 006942 307 NSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWS-NQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNIL 385 (624)
Q Consensus 307 ~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~-d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpL 385 (624)
....|.||||.|+..|+.++++.|++. +++.... +.+|+||||+|+..|+.+++++|+++| .++|.+|.+|+|||
T Consensus 107 ~~~~~~t~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~g---ad~~~~~~~G~tpl 182 (221)
T d1iknd_ 107 TNYNGHTCLHLASIHGYLGIVELLVSL-GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG---ADVNRVTYQGYSPY 182 (221)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT---CCSCCCCTTCCCGG
T ss_pred cccccchhhhHHhhcCChhheeeeccc-CcccccccccCCCCccccccccccHHHHHHHHhcC---CcccccCCCCCCHH
Confidence 344578999999999999999999999 9998888 789999999999999999999999998 66779999999999
Q ss_pred hhhhhcCCC
Q 006942 386 HLAGRLVPS 394 (624)
Q Consensus 386 HlAa~~~~~ 394 (624)
|+|++.++.
T Consensus 183 ~~A~~~~~~ 191 (221)
T d1iknd_ 183 QLTWGRPST 191 (221)
T ss_dssp GGCTTSSCH
T ss_pred HHHHHCCCH
Confidence 999999874
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.95 E-value=2.1e-27 Score=237.08 Aligned_cols=243 Identities=16% Similarity=0.153 Sum_probs=180.1
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHH
Q 006942 70 NHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIA 149 (624)
Q Consensus 70 ~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~ 149 (624)
.+|.||||.||..|+.++|++|++++++ ++.+|.+|.||||+|+.+|+.+++++|++++.+... .+..+.+|||.|+.
T Consensus 38 ~~~~t~l~~A~~~G~~~~v~~Ll~~Gad-vn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~-~~~~~~~~L~~a~~ 115 (291)
T d1s70b_ 38 FDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFLVENGANINQ-PDNEGWIPLHAAAS 115 (291)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHH
T ss_pred CCCchHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCcHHHHHHhcCCceeeeeeccccccccc-cccccccccccccc
Confidence 3466999999999999999999999998 889999999999999999999999999999988777 88999999999999
Q ss_pred hCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchh
Q 006942 150 ANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIES 229 (624)
Q Consensus 150 ~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (624)
.++.++++.|++.+... ...|.+|.+|+++|+..+.
T Consensus 116 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~a~~~~~------------------------------------------- 151 (291)
T d1s70b_ 116 CGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAM------------------------------------------- 151 (291)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHH-------------------------------------------
T ss_pred ccccchhhcccccCccc-ccccccCcccccccccccc-------------------------------------------
Confidence 99999999999987653 5678899999999875421
Q ss_pred hhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCc
Q 006942 230 FIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSA 309 (624)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~ 309 (624)
.+.+..+..... .
T Consensus 152 ------------------------------------------------------------~~~~~~ll~~~~-------~ 164 (291)
T d1s70b_ 152 ------------------------------------------------------------EELLQNEVNRQG-------V 164 (291)
T ss_dssp ------------------------------------------------------------HHHHHHHHHHHT-------C
T ss_pred ------------------------------------------------------------chhccccccccc-------c
Confidence 000000000000 0
Q ss_pred cccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhh
Q 006942 310 QLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAG 389 (624)
Q Consensus 310 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa 389 (624)
....................+... ..+....+..|.||||.|+..|+.++++.|++.+ ..+|.+|.+|+||||+|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g---~din~~~~~g~TpL~~A~ 240 (291)
T d1s70b_ 165 DIEAARKEEERIMLRDARQWLNSG-HINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR---YDVNIKDYDGWTPLHAAA 240 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHT-CCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT---CCTTCCCTTCCCHHHHHH
T ss_pred ccccccccccccccccchhhhccc-ccccccccCCCCChhhHHHHcCChhhhcccccce---ecccccccCCCCHHHHHH
Confidence 000000000000111222333333 3333333899999999999999999999999988 557799999999999999
Q ss_pred hcCCCCCccchHHHhHHHHhHHHHHHhhcCc-ccccccCCCCCChhhhhhHHHHHhHH
Q 006942 390 RLVPSSEVAGAALQMQRELQWFKAIENLVHP-FFREATNDLKQTPREVFTEEHKELVK 446 (624)
Q Consensus 390 ~~~~~~~~~gaalq~~~~l~~~~~v~~~~~~-~~~~~~N~~G~Tp~dl~~~~~~~l~~ 446 (624)
+.|+.+ .|+.++.. .+++.+|++|+||++++.+...+++.
T Consensus 241 ~~g~~~-----------------iv~lLl~~Gadv~~~d~~G~TaL~~A~e~~~~~L~ 281 (291)
T d1s70b_ 241 HWGKEE-----------------ACRILVENLCDMEAVNKVGQTAFDVADEDILGYLE 281 (291)
T ss_dssp HTTCHH-----------------HHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHH
T ss_pred HcCCHH-----------------HHHHHHHCCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 999854 23333322 35789999999999999765444443
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Probab=99.94 E-value=1.3e-28 Score=252.15 Aligned_cols=132 Identities=18% Similarity=0.112 Sum_probs=108.8
Q ss_pred ccccCCCCCchHHHHHHhhhhhcCCcchHHHHHH---HHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCC
Q 006942 22 TAKIVEPGSMTIFHMIVELLIDAESDEAICLLDK---LASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDL 98 (624)
Q Consensus 22 ~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~---Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l 98 (624)
+.+ +..| .||||+||+ .| |.+++++ |++.+ ++++.+|.+|.||||+||+.||.++|++|++.+++
T Consensus 84 ~~~-~~~~-~t~L~~Aa~----~g---~~~~~~~~~~L~~~~--~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~- 151 (346)
T d2ajaa1 84 HKK-GIKS-EVICFVAAI----TG---CSSALDTLCLLLTSD--EIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPT- 151 (346)
T ss_dssp HHH-TCCH-HHHHHHHHH----HC---CHHHHHHHTTC--CC--SSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTT-
T ss_pred Hhc-cCCC-CcHHHHHHH----hC---CHHHHHHHHHHHhCC--CcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-
Confidence 344 6788 999999999 99 9877765 66765 78899999999999999999999999999999998
Q ss_pred cccCC--CCCChHHHHHHHcCCHHHHHHHHHhcCCCccc--cCCCCCcHHHHHHHhCcHHHHHHHHHhCCC
Q 006942 99 TNIRH--GEGFLPVHDAALYGHKDTFHYLLEVTHGVDIY--SGKDGANVLSFLIAANLYDVALDLLKRHPT 165 (624)
Q Consensus 99 ~~~~n--~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~--~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~ 165 (624)
++..+ .+|.||||+||.+||.++|++|++.++..... .+.+|.||+|.|+.+|+.+++++|++.+.+
T Consensus 152 ~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~ 222 (346)
T d2ajaa1 152 EIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM 222 (346)
T ss_dssp THHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred ccccccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCC
Confidence 54544 56999999999999999999999998764321 455677888999999999999999987553
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.94 E-value=8.5e-26 Score=213.71 Aligned_cols=205 Identities=18% Similarity=0.152 Sum_probs=132.5
Q ss_pred HHHHHHHHccCchhhcc-CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhc
Q 006942 51 CLLDKLASKVDPETLAR-QDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVT 129 (624)
Q Consensus 51 ~iv~~Ll~~~~~~~~~~-~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~ 129 (624)
|+|+.|+++| .+++. .|.+|+||||+||..|+.+++++|++.+++ ++.+|..+.+|++.++..++.+.........
T Consensus 3 ~~v~~Ll~~g--~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~-~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (209)
T d1ot8a_ 3 QVISDLLAQG--AELNATMDKTGETSLHLAARFARADAAKRLLDAGAD-ANSQDNTGRTPLHAAVAADAMGVFQILLRNR 79 (209)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTCT
T ss_pred HHHHHHHHCC--CCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhccc-ccccccccccccccccccccccccccccccc
Confidence 5667777765 45654 466677777777777777777777776665 5566666777777777666666555555444
Q ss_pred CCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccc
Q 006942 130 HGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEK 209 (624)
Q Consensus 130 ~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~ 209 (624)
..........|.++.+.+.........+.|...+.++ ..++..|.|||+.++..+. ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~-~~~~~~~~t~l~~~~~~~~-------~~-------------- 137 (209)
T d1ot8a_ 80 ATNLNARMHDGTTPLILAARLAIEGMVEDLITADADI-NAADNSGKTALHWAAAVNN-------TE-------------- 137 (209)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTC-------HH--------------
T ss_pred ccccccccccccccccccccccchhhhhhhhhhcccc-cccCCCCCCcchhhcccCc-------ce--------------
Confidence 3333224555666666666666666666666554443 3455666666666664421 00
Q ss_pred cccCCcccCCCCCCCCcchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhH
Q 006942 210 ELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRT 289 (624)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~ 289 (624)
.
T Consensus 138 -------------------------------------------------------------------------------~ 138 (209)
T d1ot8a_ 138 -------------------------------------------------------------------------------A 138 (209)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred -------------------------------------------------------------------------------e
Confidence 1
Q ss_pred HHHHHHHHhhcccccccCCccccHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHH
Q 006942 290 VEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLI 364 (624)
Q Consensus 290 ~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~L 364 (624)
+..+....... +. .+..|.||||+|+..|+.++|+.|++. |+|+...|..|+||||+|+++|+.++|++|
T Consensus 139 ~~~l~~~~~~~---~~-~d~~g~TpL~~A~~~g~~~~v~~Ll~~-gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL 208 (209)
T d1ot8a_ 139 VNILLMHHANR---DA-QDDKDETPLFLAAREGSYEASKALLDN-FANREITDHMDRLPRDVASERLHHDIVRLL 208 (209)
T ss_dssp HHHHHHTTCCT---TC-CCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred eeeeccccccc---cc-cccccccccchhccccHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence 11111111111 11 466778889999999999999999998 888775688999999999999999999876
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.94 E-value=7.3e-26 Score=214.19 Aligned_cols=201 Identities=16% Similarity=0.078 Sum_probs=165.7
Q ss_pred HHHHHHHHhcCCCCccc-CCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhC
Q 006942 85 LRALKLLVKYNPDLTNI-RHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRH 163 (624)
Q Consensus 85 ~~iv~~Ll~~~~~l~~~-~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~ 163 (624)
.|+|+.|++++++ ++. .|.+|.||||+||.+|+.+++++|++.++.++. ++..+.++++.++..++...........
T Consensus 2 ~~~v~~Ll~~g~d-in~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (209)
T d1ot8a_ 2 AQVISDLLAQGAE-LNATMDKTGETSLHLAARFARADAAKRLLDAGADANS-QDNTGRTPLHAAVAADAMGVFQILLRNR 79 (209)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHTCT
T ss_pred HHHHHHHHHCCCC-cCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccc-cccccccccccccccccccccccccccc
Confidence 5899999999999 654 689999999999999999999999999999888 8999999999999999988887777766
Q ss_pred CCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhhhcccCccccc
Q 006942 164 PTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVTSKIHSKESTR 243 (624)
Q Consensus 164 ~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (624)
..........|.++.+.+......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------------- 103 (209)
T d1ot8a_ 80 ATNLNARMHDGTTPLILAARLAIE-------------------------------------------------------- 103 (209)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCT--------------------------------------------------------
T ss_pred ccccccccccccccccccccccch--------------------------------------------------------
Confidence 655556667788888876644210
Q ss_pred CCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccHHHHHHHHcCC
Q 006942 244 FGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSVAMLAAAILGI 323 (624)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~tpLh~Aa~~g~ 323 (624)
...+.|....... . ..+..|.||||.|+.+|.
T Consensus 104 --------------------------------------------~~~~~L~~~~~~~---~-~~~~~~~t~l~~~~~~~~ 135 (209)
T d1ot8a_ 104 --------------------------------------------GMVEDLITADADI---N-AADNSGKTALHWAAAVNN 135 (209)
T ss_dssp --------------------------------------------THHHHHHHTTCCT---T-CBCTTSCBHHHHHHHTTC
T ss_pred --------------------------------------------hhhhhhhhhcccc---c-ccCCCCCCcchhhcccCc
Confidence 0111111111111 1 256778999999999999
Q ss_pred HHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCchhhhhhhcCCCC
Q 006942 324 PEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNILHLAGRLVPSS 395 (624)
Q Consensus 324 ~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 395 (624)
.++++.+++. +.+....|..|.||||+|+.+|+.+++++|++.+ .++|.+|.+|+||||+|++.|+.+
T Consensus 136 ~~~~~~l~~~-~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g---ad~n~~d~~g~Tpl~~A~~~~~~~ 203 (209)
T d1ot8a_ 136 TEAVNILLMH-HANRDAQDDKDETPLFLAAREGSYEASKALLDNF---ANREITDHMDRLPRDVASERLHHD 203 (209)
T ss_dssp HHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred ceeeeeeccc-cccccccccccccccchhccccHHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHHcCCHH
Confidence 9999999999 8887766999999999999999999999999998 567799999999999999999854
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=6.5e-25 Score=208.56 Aligned_cols=213 Identities=17% Similarity=0.106 Sum_probs=174.3
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHh----cCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHH
Q 006942 70 NHGHTAATLSAAKGNLRALKLLVK----YNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLS 145 (624)
Q Consensus 70 ~~G~TpLh~Aa~~g~~~iv~~Ll~----~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh 145 (624)
.+|+||||+||..|+.++|+.|++ .+.+ ++.+|.+|.||||+|+..|+.+++++|+++++..+. .+.+|.++++
T Consensus 1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~-in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~-~~~~~~~~~~ 78 (228)
T d1k1aa_ 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMA-LDRHGQTAAH 78 (228)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHH
T ss_pred CCCccHHHHHHHcCCHHHHHHHHHHHHHCCCC-CCccCCCCCccceehhcccccccccccccccccccc-cccccccccc
Confidence 369999999999999999999986 4555 788999999999999999999999999999998888 8999999999
Q ss_pred HHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCC
Q 006942 146 FLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDG 225 (624)
Q Consensus 146 ~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 225 (624)
.|...++.++++.............+
T Consensus 79 ~a~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------------ 104 (228)
T d1k1aa_ 79 LACEHRSPTCLRALLDSAAPGTLDLE------------------------------------------------------ 104 (228)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTSCCTT------------------------------------------------------
T ss_pred cccccccccchhhhhhcccccccccc------------------------------------------------------
Confidence 99999999988877665332110000
Q ss_pred cchhhhhhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccc
Q 006942 226 DIESFIVTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNF 305 (624)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~ 305 (624)
T Consensus 105 -------------------------------------------------------------------------------- 104 (228)
T d1k1aa_ 105 -------------------------------------------------------------------------------- 104 (228)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccHHHHHHHHcCCHHHHHHHHHccCCCceec-CCCCCcHHHHHHHcCChhHHHHHhcCCccccccccccCCCCch
Q 006942 306 QNSAQLSVAMLAAAILGIPEVVNEFIMAYDSSSNWS-NQDGHTIFDHAVLYRREKVFNLIQGVNFTTFLFSSRDKAGNNI 384 (624)
Q Consensus 306 ~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~-d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~vn~~D~~GnTp 384 (624)
.......+|||.+.........+.|... .++.... +..|+++||.|+..+..++++.+++.+ ...+.+|..|+||
T Consensus 105 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~---~~~~~~d~~g~t~ 180 (228)
T d1k1aa_ 105 ARNYDGLTALHVAVNTECQETVQLLLER-GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHG---ANVNAQMYSGSSA 180 (228)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCBCTTSCBH
T ss_pred ccccccccccccccccccchhhhhhhcc-ccccccccccchhhHHHHHHHhhhhhhhhhhhhhc---cccccccccCcch
Confidence 0222336788888888888889999988 7777777 899999999999999999999999988 5567999999999
Q ss_pred hhhhhhcCCCCCccchHHHhHHHHhHHHHHHhhcCc-ccccccCCCCCChhhhhhH
Q 006942 385 LHLAGRLVPSSEVAGAALQMQRELQWFKAIENLVHP-FFREATNDLKQTPREVFTE 439 (624)
Q Consensus 385 LHlAa~~~~~~~~~gaalq~~~~l~~~~~v~~~~~~-~~~~~~N~~G~Tp~dl~~~ 439 (624)
||+|++.|+.+ .++.++.. .+++.+|.+|+||++++.+
T Consensus 181 L~~A~~~g~~~-----------------~v~~Ll~~Gad~n~~d~~G~TpL~~A~~ 219 (228)
T d1k1aa_ 181 LHSASGRGLLP-----------------LVRTLVRSGADSSLKNCHNDTPLMVARS 219 (228)
T ss_dssp HHHHHHHTCHH-----------------HHHHHHHTTCCTTCCCTTSCCTTTTCSS
T ss_pred HHHHHHcCCHH-----------------HHHHHHHCCCCCCCCCCCCCCHHHHHHh
Confidence 99999999853 12222222 3578999999999999864
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1e-24 Score=196.11 Aligned_cols=153 Identities=24% Similarity=0.282 Sum_probs=135.6
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcH
Q 006942 74 TAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLY 153 (624)
Q Consensus 74 TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~ 153 (624)
+|||+||..|+.++|+.|++++++ ++.+|.+|.||||+|+ .|+.+++++|++.+++.+. .+.+|.++++.++..++.
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d-~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~-~~~~~~~~l~~~~~~~~~ 79 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDL-KDRTGFAVIHDAARAGFL 79 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCC-TTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-cCccCCcccccccccc-ccccccccccccccccccc-ccccCccccccccccccc
Confidence 899999999999999999999998 7899999999999886 7999999999999999888 899999999999999999
Q ss_pred HHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhh
Q 006942 154 DVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVT 233 (624)
Q Consensus 154 ~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (624)
+.+..+++.+.+. ..
T Consensus 80 ~~~~~l~~~~~~~-~~---------------------------------------------------------------- 94 (156)
T d1ihba_ 80 DTLQTLLEFQADV-NI---------------------------------------------------------------- 94 (156)
T ss_dssp HHHHHHHHTTCCT-TC----------------------------------------------------------------
T ss_pred ccccccccccccc-cc----------------------------------------------------------------
Confidence 9999998875532 11
Q ss_pred hcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccH
Q 006942 234 SKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSV 313 (624)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~t 313 (624)
.+..|.+
T Consensus 95 -------------------------------------------------------------------------~~~~~~~ 101 (156)
T d1ihba_ 95 -------------------------------------------------------------------------EDNEGNL 101 (156)
T ss_dssp -------------------------------------------------------------------------CCTTSCC
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 3445677
Q ss_pred HHHHHHHcCCHHHHHHHHHccCCCceec-CCCCCcHHHHHHHcCChhHHHHHhcCC
Q 006942 314 AMLAAAILGIPEVVNEFIMAYDSSSNWS-NQDGHTIFDHAVLYRREKVFNLIQGVN 368 (624)
Q Consensus 314 pLh~Aa~~g~~~iv~~Ll~~~~~d~~~~-d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 368 (624)
|||.|+..|+.++++.|+++ ++..... |.+|+||||+|+++++.+++++|+++|
T Consensus 102 ~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G 156 (156)
T d1ihba_ 102 PLHLAAKEGHLRVVEFLVKH-TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156 (156)
T ss_dssp HHHHHHHTTCHHHHHHHHHH-SCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred cccccccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 88888888899999999999 8855555 999999999999999999999999875
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Probab=99.91 E-value=4.3e-27 Score=240.77 Aligned_cols=147 Identities=12% Similarity=0.036 Sum_probs=112.6
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCc---------hhhccCCCCCChHHHHHHHcCCHHHHHH---HHhcCCCC
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDP---------ETLARQDNHGHTAATLSAAKGNLRALKL---LVKYNPDL 98 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~---------~~~~~~d~~G~TpLh~Aa~~g~~~iv~~---Ll~~~~~l 98 (624)
.+.++++.. .+ ..++.+.|...+.. .+++.++..|.||||+||.+||.+++++ |++.+++
T Consensus 47 ~~~~~~~~~----~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~- 118 (346)
T d2ajaa1 47 AIHIFLPGT----KN---MEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEI- 118 (346)
T ss_dssp HHHHCCCCS----SH---HHHHHHHHHHHHHHTTTTCTTHHHHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSS-
T ss_pred HHHHHHHhh----cc---HHHHHHHHHHcchhhccchhhhhhHHHhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCc-
Confidence 344444555 55 67777777655311 2356778899999999999999988776 6777776
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccc-cCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCC--cccCCCCC
Q 006942 99 TNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIY-SGKDGANVLSFLIAANLYDVALDLLKRHPTIG--RDSIDSRR 175 (624)
Q Consensus 99 ~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~-~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~--~~~d~~G~ 175 (624)
++.+|.+|.||||+||++||.++|++|++.+++.+.. .+.+|.||||+|+.+|+.+++++|++.++... ...+.+|.
T Consensus 119 in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~ 198 (346)
T d2ajaa1 119 VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYY 198 (346)
T ss_dssp CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCc
Confidence 8889999999999999999999999999999987662 24579999999999999999999999876542 23345677
Q ss_pred CHHHHHHcCC
Q 006942 176 IILNTLAQKP 185 (624)
Q Consensus 176 TpLh~Aa~~~ 185 (624)
||+|.|+++|
T Consensus 199 t~l~~A~~~g 208 (346)
T d2ajaa1 199 AFRWAAVGRG 208 (346)
T ss_dssp HHHHHHSTTC
T ss_pred chhhHHhhcC
Confidence 8888888765
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=5.3e-24 Score=191.42 Aligned_cols=139 Identities=20% Similarity=0.217 Sum_probs=122.9
Q ss_pred hHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHH
Q 006942 32 TIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVH 111 (624)
Q Consensus 32 T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh 111 (624)
+|||+||. .| +.++|+.|++.| .+++.+|.+|.||||+|+ .|+.+++++|++++++ ++.++..|.+|++
T Consensus 3 ~~Lh~Aa~----~g---~~~~v~~Ll~~g--~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~-~~~~~~~~~~~l~ 71 (156)
T d1ihba_ 3 NELASAAA----RG---DLEQLTSLLQNN--VNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGAN-PDLKDRTGFAVIH 71 (156)
T ss_dssp HHHHHHHH----HT---CHHHHHHHTTSC--CCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred HHHHHHHH----cC---CHHHHHHHHHCC--CCcCccCCcccccccccc-cccccccccccccccc-cccccccCccccc
Confidence 89999999 99 999999999997 678999999999999886 7999999999999988 7889999999999
Q ss_pred HHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 006942 112 DAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLA 182 (624)
Q Consensus 112 ~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa 182 (624)
.++..++.++++.|++.+...+. .+..|.+|||+|+..++.++++.|+++.+.....+|.+|+||||+|+
T Consensus 72 ~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~ 141 (156)
T d1ihba_ 72 DAARAGFLDTLQTLLEFQADVNI-EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLAR 141 (156)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHH
T ss_pred ccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccCCCCCCHHHHHH
Confidence 99999999999999999998888 89999999999999999999999999877544444444444444433
|
| >d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p19ink4D species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=4.4e-24 Score=192.15 Aligned_cols=147 Identities=22% Similarity=0.260 Sum_probs=111.8
Q ss_pred CccCCCHHHHHHHHHcCccccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSA 80 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa 80 (624)
||.+|+++.|+.++++++..++.+ |..| +||||+|+ .| +.+++++|++.+ .+++.++..|.+||+.|+
T Consensus 9 Aa~~g~~~~vk~lL~~~~~~~n~~-d~~g-~t~L~~A~-----~~---~~~~v~~Ll~~~--~~~~~~~~~~~~~l~~~~ 76 (156)
T d1bd8a_ 9 AAARGDVQEVRRLLHRELVHPDAL-NRFG-KTALQVMM-----FG---STAIALELLKQG--ASPNVQDTSGTSPVHDAA 76 (156)
T ss_dssp HHHHTCHHHHHHHHHTTCCCTTCC-CTTS-CCHHHHSC-----TT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHhCCCCCCcc-CCCC-Cccccccc-----cc---cccccccccccc--cccccccccccccccccc
Confidence 567788888888887777666666 7778 88888664 46 667788888775 556777777888888888
Q ss_pred HcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHH
Q 006942 81 AKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLL 160 (624)
Q Consensus 81 ~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll 160 (624)
..++.++++.+++++++ ++.+|..|.||||+||..|+.+++++|+ .+++.+. +|.+|+||||+|+..|+.++++.|+
T Consensus 77 ~~~~~~~~~~~l~~~~~-~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~-~d~~G~TpL~~A~~~g~~~iv~~Ll 153 (156)
T d1bd8a_ 77 RTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHR-RDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp HTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTC-CCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred ccccccccccccccccc-cccccCCCCeeecccccccccccccccc-ccccccc-cCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 88888888888888776 6677778888888888888888887776 4555655 7788888888888888888887777
Q ss_pred Hh
Q 006942 161 KR 162 (624)
Q Consensus 161 ~~ 162 (624)
++
T Consensus 154 ~h 155 (156)
T d1bd8a_ 154 GH 155 (156)
T ss_dssp TT
T ss_pred hh
Confidence 54
|
| >d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: GA bindinig protein (GABP) beta 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.90 E-value=3e-23 Score=185.75 Aligned_cols=151 Identities=20% Similarity=0.151 Sum_probs=128.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Q 006942 72 GHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAAN 151 (624)
Q Consensus 72 G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~ 151 (624)
..||||.||+.|+.++|+.|++++++ .+ .|..|.||||+|+..++.++++.++........ .+..+.++++.++...
T Consensus 2 ~~t~L~~Aa~~g~~~~v~~LL~~ga~-~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 78 (153)
T d1awcb_ 2 LGKKLLEAARAGQDDEVRILMANGAP-FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA-RTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC-CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHT
T ss_pred CCHHHHHHHHCCCHHHHHHHHHcCCC-cc-cccCCCccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 34999999999999999999999887 33 688899999999999999999999888877766 7788888999999999
Q ss_pred cHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhh
Q 006942 152 LYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFI 231 (624)
Q Consensus 152 ~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (624)
+.+.++.++....+. .
T Consensus 79 ~~~~~~~l~~~~~~~-~--------------------------------------------------------------- 94 (153)
T d1awcb_ 79 HANIVEVLLKHGADV-N--------------------------------------------------------------- 94 (153)
T ss_dssp CHHHHHHHHTTTCCT-T---------------------------------------------------------------
T ss_pred cceeeecccccCCcc-c---------------------------------------------------------------
Confidence 999888887654322 1
Q ss_pred hhhcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccc
Q 006942 232 VTSKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQL 311 (624)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g 311 (624)
..+..|
T Consensus 95 --------------------------------------------------------------------------~~~~~g 100 (153)
T d1awcb_ 95 --------------------------------------------------------------------------AKDMLK 100 (153)
T ss_dssp --------------------------------------------------------------------------CCCTTS
T ss_pred --------------------------------------------------------------------------cccccC
Confidence 145567
Q ss_pred cHHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHH
Q 006942 312 SVAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLI 364 (624)
Q Consensus 312 ~tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~L 364 (624)
+||||+|+..|+.++|++|++. ++++...|.+|+||||+|+.+|+.+++++|
T Consensus 101 ~T~L~~A~~~g~~~iv~~ll~~-gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL 152 (153)
T d1awcb_ 101 MTALHWATEHNHQEVVELLIKY-GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred chHHHhhhhcchhheeeecccc-ccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence 8888888899999999999999 998886699999999999999999999876
|
| >d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p19ink4D species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.7e-23 Score=186.87 Aligned_cols=152 Identities=14% Similarity=0.167 Sum_probs=130.9
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcH
Q 006942 74 TAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLY 153 (624)
Q Consensus 74 TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~ 153 (624)
+.||.||..|+.++|+.|++.++..++.+|..|.||||+|+ .|+.+++++|++++.+.+. .+..|.+|++.++..++.
T Consensus 4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~-~~~~~~~~l~~~~~~~~~ 81 (156)
T d1bd8a_ 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNV-QDTSGTSPVHDAARTGFL 81 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-ccccccccccccccccccc-cccccccccccccccccc
Confidence 56999999999999999999866558899999999999987 5899999999999998888 889999999999999999
Q ss_pred HHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCCCCCCCCcchhhhhhhhccccccccccCCcccCCCCCCCCcchhhhhh
Q 006942 154 DVALDLLKRHPTIGRDSIDSRRIILNTLAQKPYAFASGSRLGRLQRLIYNCIPVEKELVPSIQTNDYHDLDGDIESFIVT 233 (624)
Q Consensus 154 ~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (624)
++++.+++.++++ +.
T Consensus 82 ~~~~~~l~~~~~~-n~---------------------------------------------------------------- 96 (156)
T d1bd8a_ 82 DTLKVLVEHGADV-NV---------------------------------------------------------------- 96 (156)
T ss_dssp HHHHHHHHTTCCS-CC----------------------------------------------------------------
T ss_pred ccccccccccccc-cc----------------------------------------------------------------
Confidence 9999999876643 11
Q ss_pred hcccCcccccCCCCcchhhhhhhhhHHHHHHhhhccCCCCCCccchHhhhhhhhhHHHHHHHHHhhcccccccCCccccH
Q 006942 234 SKIHSKESTRFGSTQQITTTFGAMLHKLHRMLWNAXMHLSPGIKGIHDQKLTHMRTVEIVRIICEGVVWTNFQNSAQLSV 313 (624)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~lL~~l~~~~~~~~~~~~~~g~t 313 (624)
.+..|.|
T Consensus 97 -------------------------------------------------------------------------~~~~~~t 103 (156)
T d1bd8a_ 97 -------------------------------------------------------------------------PDGTGAL 103 (156)
T ss_dssp -------------------------------------------------------------------------CCTTSCC
T ss_pred -------------------------------------------------------------------------ccCCCCe
Confidence 3345677
Q ss_pred HHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHhcC
Q 006942 314 AMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQGV 367 (624)
Q Consensus 314 pLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 367 (624)
|||+|+..|+.+++++|+ . ++++...|.+|+||||+|+++|+.+++++|+++
T Consensus 104 ~L~~A~~~~~~~i~~~L~-~-~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h 155 (156)
T d1bd8a_ 104 PIHLAVQEGHTAVVSFLA-A-ESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHTCHHHHHHHH-T-TSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred eecccccccccccccccc-c-cccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence 778888888899998777 5 677765599999999999999999999999875
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.89 E-value=1.4e-23 Score=210.41 Aligned_cols=83 Identities=20% Similarity=0.214 Sum_probs=62.2
Q ss_pred hhccC-CCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCH-------HHHHHHHHhcCCCccc
Q 006942 64 TLARQ-DNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHK-------DTFHYLLEVTHGVDIY 135 (624)
Q Consensus 64 ~~~~~-d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~-------~iv~~Ll~~~~~~~~~ 135 (624)
++|.. |.+|+||||+||..|+.++|++|++++++ ++.+|..|+||||.||..++. +++++|.+ ....
T Consensus 98 dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~---~~~~- 172 (301)
T d1sw6a_ 98 NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---CLIL- 172 (301)
T ss_dssp CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---GGGE-
T ss_pred CcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhh---hhhh-
Confidence 45544 88899999999999999999999998887 778888899999999987652 34444432 2233
Q ss_pred cCCCCCcHHHHHHHhC
Q 006942 136 SGKDGANVLSFLIAAN 151 (624)
Q Consensus 136 ~~~~G~t~Lh~A~~~~ 151 (624)
.|..|+||||+++..+
T Consensus 173 ~d~~g~t~lh~~~~~~ 188 (301)
T d1sw6a_ 173 EDSMNRTILHHIIITS 188 (301)
T ss_dssp ECTTCCCHHHHHHHHH
T ss_pred cccccCCHHHHHHHHh
Confidence 6778888888877544
|
| >d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p16ink4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=9.9e-23 Score=175.66 Aligned_cols=119 Identities=19% Similarity=0.157 Sum_probs=110.4
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCC-hH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGF-LP 109 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~-TP 109 (624)
.++||+||+ .| +.++|+.|+++| .+++.+|.+|.||||.|+ .|+.+++++|++++++ ++.+|..|. ||
T Consensus 4 ~~~L~~Aa~----~G---~~~~v~~Ll~~g--ad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~ 72 (125)
T d1bi7b_ 4 ADWLATAAA----RG---RVEEVRALLEAG--ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRP 72 (125)
T ss_dssp TTHHHHHHH----HT---CHHHHHHHHTTT--CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCH
T ss_pred hhHHHHHHH----CC---CHHHHHHHHHcC--Cccccccccccccccccc-cccccccccccccccc-cccccccccccc
Confidence 799999999 99 999999999997 678999999999999764 7999999999999988 677777765 69
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHH
Q 006942 110 VHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLK 161 (624)
Q Consensus 110 Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~ 161 (624)
||+||+.|+.+++++|++++++.+. +|.+|+||||+|+.+|+.+++++|+.
T Consensus 73 L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~G~T~l~~A~~~g~~~~v~~Lls 123 (125)
T d1bi7b_ 73 VHDAAREGFLDTLVVLHRAGARLDV-RDAWGRLPVDLAEELGHRDVARYLRA 123 (125)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred ccccccccccccccccccccccccc-ccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 9999999999999999999999888 89999999999999999999999874
|
| >d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: GA bindinig protein (GABP) beta 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.87 E-value=6.3e-22 Score=177.01 Aligned_cols=143 Identities=16% Similarity=0.126 Sum_probs=131.0
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPV 110 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPL 110 (624)
.||||.||+ .| +.++|+.|++++. +++ .|..|.||||+|+..++.++++.++..... ....+..+.+++
T Consensus 3 ~t~L~~Aa~----~g---~~~~v~~LL~~ga--~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 71 (153)
T d1awcb_ 3 GKKLLEAAR----AG---QDDEVRILMANGA--PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPL 71 (153)
T ss_dssp HHHHHHHHH----HT---CHHHHHHHHHHTC--CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHH
T ss_pred CHHHHHHHH----CC---CHHHHHHHHHcCC--Ccc-cccCCCcccccccccccccccccccccccc-cccccccccccc
Confidence 599999999 99 9999999999983 444 699999999999999999999999998777 456677889999
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHHcCCC
Q 006942 111 HDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLAQKPY 186 (624)
Q Consensus 111 h~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~~~~ 186 (624)
+.++...+.+++++|++.+.+... ++.+|.||||+|+..|+.+++++|++.+.++ +.+|.+|.||||+|+.+++
T Consensus 72 ~~~~~~~~~~~~~~l~~~~~~~~~-~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~-~~~d~~g~Tpl~~A~~~g~ 145 (153)
T d1awcb_ 72 HMAASEGHANIVEVLLKHGADVNA-KDMLKMTALHWATEHNHQEVVELLIKYGADV-HTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred ccccccccceeeecccccCCcccc-ccccCchHHHhhhhcchhheeeeccccccCC-cccCCCCCCHHHHHHHcCC
Confidence 999999999999999999998888 8999999999999999999999999998775 6789999999999998864
|
| >d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myotrophin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.86 E-value=2.6e-23 Score=177.30 Aligned_cols=107 Identities=21% Similarity=0.239 Sum_probs=93.4
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPV 110 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPL 110 (624)
+|||++||+ .| +.++|+.|++.| .+++.+|.+|.||||+|+..|+.+++++|++++++ ++.+|..|.|||
T Consensus 3 ~tpL~~A~~----~g---~~~~v~~Ll~~g--~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~d-in~~d~~g~tpL 72 (118)
T d1myoa_ 3 DKEFMWALK----NG---DLDEVKDYVAKG--EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPL 72 (118)
T ss_dssp HHHHHHHHH----TT---CHHHHHHHHTTT--CCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCT-TTCCSSSCSCHH
T ss_pred ChHHHHHHH----CC---CHHHHHHHHHhh--hccccccccccccccccccccccccccccccccce-eeecccccccch
Confidence 689999999 99 999999999886 67788888899999999999999999999988887 778888899999
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q 006942 111 HDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLI 148 (624)
Q Consensus 111 h~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~ 148 (624)
|+|+.+|+.+++++|+++|++.+. +|.+|.||||+|.
T Consensus 73 h~A~~~~~~~~v~~Ll~~Gad~~~-~d~~G~t~l~~a~ 109 (118)
T d1myoa_ 73 LSAVYEGHVSCVKLLLSKGADKTV-KGPDGLTALEATD 109 (118)
T ss_dssp HHHHTTTCCHHHHHHHTTCCCSSS-SSSSTCCCCCTCS
T ss_pred hhhhhcCchhhhhhhhccccccee-eCCCCCCHHHHHh
Confidence 999999999999999998888887 8888888888873
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.85 E-value=5.1e-22 Score=198.82 Aligned_cols=147 Identities=14% Similarity=0.094 Sum_probs=118.1
Q ss_pred ccccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCH-------HHHHHHH
Q 006942 20 ALTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNL-------RALKLLV 92 (624)
Q Consensus 20 ~~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~-------~iv~~Ll 92 (624)
+++..+|.+| +||||+||. .| +.++|+.|++.| ++++.+|..|+||||.||..|+. ++++++.
T Consensus 98 dvn~~~D~~G-~T~LH~Aa~----~g---~~~~v~~Ll~~g--ad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~ 167 (301)
T d1sw6a_ 98 NLNIPVDEHG-NTPLHWLTS----IA---NLELVKHLVKHG--SNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY 167 (301)
T ss_dssp CSCSCCSTTC-CCHHHHHHH----TT---CHHHHHHHHHTT--CCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG
T ss_pred CcCcCcCCCC-CCHHHHHHH----cC---CHHHHHHHHHCC--CCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHh
Confidence 4555568899 999999999 99 999999999997 78899999999999999987763 3444443
Q ss_pred hcCCCCcccCCCCCChHHHHHHHcCC----HH--------HHHHHHHhcCC-----------------------------
Q 006942 93 KYNPDLTNIRHGEGFLPVHDAALYGH----KD--------TFHYLLEVTHG----------------------------- 131 (624)
Q Consensus 93 ~~~~~l~~~~n~~G~TPLh~Aa~~g~----~~--------iv~~Ll~~~~~----------------------------- 131 (624)
+ .+..+|..|.||||+|+..+. .+ ++.++...+..
T Consensus 168 ~----~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (301)
T d1sw6a_ 168 P----CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD 243 (301)
T ss_dssp G----GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS
T ss_pred h----hhhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHh
Confidence 2 255778999999999987654 22 23344443332
Q ss_pred --------CccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 006942 132 --------VDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTIGRDSIDSRRIILNTLA 182 (624)
Q Consensus 132 --------~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa 182 (624)
.+. +|.+|+||||+|++.|+.+++++|++.+.++ +.+|.+|.|||++|+
T Consensus 244 ~~~~~~~~in~-~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~-~~~n~~G~Tpl~~A~ 300 (301)
T d1sw6a_ 244 LKWIIANMLNA-QDSNGDTCLNIAARLGNISIVDALLDYGADP-FIANKSGLRPVDFGA 300 (301)
T ss_dssp HHHHHHHTTTC-CCTTSCCHHHHHHHHCCHHHHHHHHHTTCCT-TCCCTTSCCGGGGTC
T ss_pred hHHHHhcCccC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHcC
Confidence 233 6899999999999999999999999998875 778999999999986
|
| >d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 53BP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=1.1e-21 Score=170.15 Aligned_cols=122 Identities=16% Similarity=0.215 Sum_probs=110.9
Q ss_pred chHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHH
Q 006942 31 MTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPV 110 (624)
Q Consensus 31 ~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPL 110 (624)
.++||.||. .| +.++|+.|++++ .+++.+|.+|+||||+||..|+.+++++|++.+++ ++.+|.+|.|||
T Consensus 2 l~lL~~A~~----~G---~~~~v~~Ll~~g--~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~-~~~~d~~g~tpL 71 (130)
T d1ycsb1 2 LALLLDSSL----EG---EFDLVQRIIYEV--DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPL 71 (130)
T ss_dssp HHHHHHHHH----HT---CHHHHHHHTSTT--SSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHH
T ss_pred hHHHHHHHH----cC---CHHHHHHHHHcC--CCccccccccccccccccccccccccccccccccc-cccccccCcccc
Confidence 378999999 99 999999999997 67899999999999999999999999999999988 789999999999
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHH--HHhCcHHHHHHHHHh
Q 006942 111 HDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFL--IAANLYDVALDLLKR 162 (624)
Q Consensus 111 h~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A--~~~~~~~~v~~Ll~~ 162 (624)
|+|+.+|+.+++++|++++++++.....+|.|+++.+ +.+|+.+++++|+..
T Consensus 72 h~A~~~g~~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~ 125 (130)
T d1ycsb1 72 HCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 125 (130)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence 9999999999999999999988863345688887765 577889999999875
|
| >d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myotrophin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.83 E-value=2.7e-21 Score=164.63 Aligned_cols=108 Identities=18% Similarity=0.128 Sum_probs=101.8
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCc
Q 006942 73 HTAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANL 152 (624)
Q Consensus 73 ~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~ 152 (624)
+|||++|++.|+.++|+.|++++++ ++.+|..|.||||+|+..|+.+++++|++.+++.+. +|.+|+||||+|+.+|+
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll~~g~d-~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~-~d~~g~tpLh~A~~~~~ 80 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-PDKHHITPLLSAVYEGH 80 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTTCC-CCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTC-CSSSCSCHHHHHHTTTC
T ss_pred ChHHHHHHHCCCHHHHHHHHHhhhc-cccccccccccccccccccccccccccccccceeee-cccccccchhhhhhcCc
Confidence 5899999999999999999999988 889999999999999999999999999999999988 89999999999999999
Q ss_pred HHHHHHHHHhCCCCCcccCCCCCCHHHHHHc
Q 006942 153 YDVALDLLKRHPTIGRDSIDSRRIILNTLAQ 183 (624)
Q Consensus 153 ~~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~ 183 (624)
.++++.|++++.++ +.+|.+|.||||+|..
T Consensus 81 ~~~v~~Ll~~Gad~-~~~d~~G~t~l~~a~~ 110 (118)
T d1myoa_ 81 VSCVKLLLSKGADK-TVKGPDGLTALEATDN 110 (118)
T ss_dssp CHHHHHHHTTCCCS-SSSSSSTCCCCCTCSS
T ss_pred hhhhhhhhcccccc-eeeCCCCCCHHHHHhH
Confidence 99999999998775 6789999999998753
|
| >d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Pyk2-associated protein beta species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.82 E-value=3.6e-20 Score=164.95 Aligned_cols=125 Identities=22% Similarity=0.262 Sum_probs=106.2
Q ss_pred CccCCCHHHHHHHHHcCccc----cccccCCCCCchHHHHHHhhhhhcCCcchHHHHHHHHHccCchhhccCCCCCChHH
Q 006942 1 MIEKNDWQGVEDFVTNHPDA----LTAKIVEPGSMTIFHMIVELLIDAESDEAICLLDKLASKVDPETLARQDNHGHTAA 76 (624)
Q Consensus 1 Aa~~G~~~~v~~ll~~~~~~----~~~~~~~~g~~T~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~~~~~~d~~G~TpL 76 (624)
|++++|...+.+++.+..+. .....+..| +||||+|++ .++..+.++|++|++++ .+++.+|.+|+|||
T Consensus 13 Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g-~t~Lh~A~~----~~~~~~~~iv~~Ll~~g--adin~~d~~g~TpL 85 (154)
T d1dcqa1 13 AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPD-ETALHLAVR----SVDRTSLHIVDFLVQNS--GNLDKQTGKGSTAL 85 (154)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTT-CBHHHHHHH----HCCTTTHHHHHHHHHHC--SCTTCCCTTCCCHH
T ss_pred HHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCC-CchHHHHHH----hcCCCCHHHHHHHHHcC--CChhhhhhhhcccc
Confidence 56789999999998874321 112226778 999999998 53222899999999997 67899999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCc
Q 006942 77 TLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVD 133 (624)
Q Consensus 77 h~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~ 133 (624)
|+||..|+.+++++|++++++ ++.+|.+|.||||+|+..|+.+++++|++.+....
T Consensus 86 h~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~~ 141 (154)
T d1dcqa1 86 HYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 141 (154)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred ccccccccccccccccccCcc-ccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 999999999999999999998 78999999999999999999999999999876543
|
| >d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Pyk2-associated protein beta species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=1.3e-19 Score=161.36 Aligned_cols=125 Identities=17% Similarity=0.157 Sum_probs=108.3
Q ss_pred HHHHHHhhhhhcCCcchHHHHHHHHHccCch----hhccCCCCCChHHHHHHHc---CCHHHHHHHHhcCCCCcccCCCC
Q 006942 33 IFHMIVELLIDAESDEAICLLDKLASKVDPE----TLARQDNHGHTAATLSAAK---GNLRALKLLVKYNPDLTNIRHGE 105 (624)
Q Consensus 33 ~Lh~Aa~~~~~~g~~~~~~iv~~Ll~~~~~~----~~~~~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~~~~l~~~~n~~ 105 (624)
.|+.|++ .+ ++..+..++..+.+. .....+..|+||||+|++. |+.++|++|++++++ ++.+|.+
T Consensus 9 ~L~~Av~----~~---dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-in~~d~~ 80 (154)
T d1dcqa1 9 SLCEAVK----TR---DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGK 80 (154)
T ss_dssp HHHHHHH----TT---CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTT
T ss_pred HHHHHHH----hC---CHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCC-hhhhhhh
Confidence 3456677 88 999998888876321 1233477899999999974 789999999999998 7899999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcHHHHHHHHHhCCCC
Q 006942 106 GFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLYDVALDLLKRHPTI 166 (624)
Q Consensus 106 G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~~~v~~Ll~~~~~l 166 (624)
|.||||+||..|+.+++++|++++++.+. +|.+|.||||+|+..|+.++++.|++.....
T Consensus 81 g~TpLh~A~~~~~~~~v~~Ll~~gad~~~-~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~ 140 (154)
T d1dcqa1 81 GSTALHYCCLTDNAECLKLLLRGKASIEI-ANESGETPLDIAKRLKHEHCEELLTQALSGR 140 (154)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred hccccccccccccccccccccccCccccc-cCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence 99999999999999999999999999988 9999999999999999999999999876543
|
| >d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p16ink4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=2.9e-20 Score=159.97 Aligned_cols=52 Identities=15% Similarity=0.058 Sum_probs=28.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHccCCCceecCCCCCcHHHHHHHcCChhHHHHHh
Q 006942 313 VAMLAAAILGIPEVVNEFIMAYDSSSNWSNQDGHTIFDHAVLYRREKVFNLIQ 365 (624)
Q Consensus 313 tpLh~Aa~~g~~~iv~~Ll~~~~~d~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll 365 (624)
||||+|++.|+.++++.|+++ |++....|..|+||||+|+++|+.+++++|+
T Consensus 71 ~~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Ll 122 (125)
T d1bi7b_ 71 RPVHDAAREGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHRDVARYLR 122 (125)
T ss_dssp CHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHS
T ss_pred ccccccccccccccccccccc-ccccccccCCCCCHHHHHHHcCCHHHHHHHH
Confidence 455555555555555555555 5554444555555555555555555555554
|
| >d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 53BP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=3.6e-19 Score=154.07 Aligned_cols=108 Identities=16% Similarity=0.224 Sum_probs=99.5
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCcH
Q 006942 74 TAATLSAAKGNLRALKLLVKYNPDLTNIRHGEGFLPVHDAALYGHKDTFHYLLEVTHGVDIYSGKDGANVLSFLIAANLY 153 (624)
Q Consensus 74 TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~n~~G~TPLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~t~Lh~A~~~~~~ 153 (624)
++||.||..|+.++|+.|++++++ ++.+|.+|.||||+||..|+.+++++|++.+.+.+. +|.+|+||||+|+.+|+.
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d-~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~-~d~~g~tpLh~A~~~g~~ 80 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA-ADSDGWTPLHCAASCNNV 80 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCC-cccccccccccccccccccccccccccccccccccc-ccccCcccccccchhhHH
Confidence 689999999999999999999988 889999999999999999999999999999999888 899999999999999999
Q ss_pred HHHHHHHHhCCCCCcccCCCCCCHHHHHHc
Q 006942 154 DVALDLLKRHPTIGRDSIDSRRIILNTLAQ 183 (624)
Q Consensus 154 ~~v~~Ll~~~~~l~~~~d~~G~TpLh~Aa~ 183 (624)
++++.|++++.++....+..|.||++++..
T Consensus 81 ~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a 110 (130)
T d1ycsb1 81 QVCKFLVESGAAVFAMTYSDMQTAADKCEE 110 (130)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHCCS
T ss_pred HHHHHHHHcCCCcccccCCCCCCHHHHHHH
Confidence 999999999887755555679999887653
|