Citrus Sinensis ID: 006996
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 622 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SJT1 | 700 | SUMO-activating enzyme su | no | no | 0.782 | 0.695 | 0.806 | 0.0 | |
| Q54L40 | 661 | SUMO-activating enzyme su | yes | no | 0.747 | 0.703 | 0.398 | 1e-101 | |
| Q9UBT2 | 640 | SUMO-activating enzyme su | yes | no | 0.863 | 0.839 | 0.374 | 2e-95 | |
| Q9Z1F9 | 638 | SUMO-activating enzyme su | yes | no | 0.884 | 0.862 | 0.370 | 2e-95 | |
| Q28GH3 | 641 | SUMO-activating enzyme su | yes | no | 0.807 | 0.783 | 0.385 | 2e-94 | |
| Q7ZY60 | 641 | SUMO-activating enzyme su | N/A | no | 0.807 | 0.783 | 0.381 | 4e-93 | |
| Q7SXG4 | 650 | SUMO-activating enzyme su | yes | no | 0.754 | 0.721 | 0.386 | 5e-93 | |
| Q642Q1 | 641 | SUMO-activating enzyme su | N/A | no | 0.807 | 0.783 | 0.38 | 1e-92 | |
| O42939 | 628 | Ubiquitin-activating enzy | yes | no | 0.705 | 0.699 | 0.390 | 4e-88 | |
| Q9NAN1 | 582 | SUMO-activating enzyme su | yes | no | 0.749 | 0.800 | 0.345 | 1e-78 |
| >sp|Q9SJT1|SAE2_ARATH SUMO-activating enzyme subunit 2 OS=Arabidopsis thaliana GN=SAE2 PE=1 SV=1 | Back alignment and function desciption |
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Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/491 (80%), Positives = 447/491 (91%), Gaps = 4/491 (0%)
Query: 12 IDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVKDPKFNVEFF 71
IDMDTIEVSNLNRQFLFR+SHVGQSKAKVARDAVL+FRP ++I ++HANVK+P+F+V+FF
Sbjct: 42 IDMDTIEVSNLNRQFLFRRSHVGQSKAKVARDAVLRFRPNINIRSYHANVKNPEFDVDFF 101
Query: 72 KQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPA 131
KQF+VVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVH+KGKTECYECQ KPA
Sbjct: 102 KQFDVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHIKGKTECYECQTKPA 161
Query: 132 PKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQENDLNVRSSD-ASSSAHAEDVFV 190
PKTYPVCTITSTP+KFVHCIVWAKDLLFAKLFGDKNQ+NDLNVRS++ ASSS EDVF
Sbjct: 162 PKTYPVCTITSTPTKFVHCIVWAKDLLFAKLFGDKNQDNDLNVRSNNSASSSKETEDVFE 221
Query: 191 RRKDEDIDQYGRRIYDHVFGYNIEVASSNEETWKNRNRPKPIYSADVMPENLTEQNGNVA 250
R +DEDI+QYGR+IYDHVFG NIE A SNEETWKNR RP+PIYS DV+PE+LT+QNG+
Sbjct: 222 RSEDEDIEQYGRKIYDHVFGSNIEAALSNEETWKNRRRPRPIYSKDVLPESLTQQNGS-T 280
Query: 251 KNCVVDTSS--VSAMASLGLKNPQDTWTLLESSRIFLEALKLFFAKREKEIGNLSFDKDD 308
+NC V VSAM SLGLKNPQ+ W L ++S +F+EALKLFFAKR+KEIG+L+FDKDD
Sbjct: 281 QNCSVTDGDLMVSAMPSLGLKNPQELWGLTQNSLVFIEALKLFFAKRKKEIGHLTFDKDD 340
Query: 309 QLAVEFVTAAANIRAASFGISLHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVLLK 368
QLAVEFVTAAANIRA SFGI LHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVL K
Sbjct: 341 QLAVEFVTAAANIRAESFGIPLHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVLKK 400
Query: 369 DTDKYRMTYCLEHITKKMLLMPVEPYEPNKSCYVCSETPLSLEINTSRSKLRDFVEKIVK 428
D DK+RMTYCLEH +KK+LLMP+EPYEPN +CYVCSETPL LEINT +SKLRD V+KIVK
Sbjct: 401 DVDKFRMTYCLEHPSKKLLLMPIEPYEPNPACYVCSETPLVLEINTRKSKLRDLVDKIVK 460
Query: 429 AKLGINFPLIMHGSNLLYEVGDDLDEVEVANYAANLEKVLSQLPSPVTNGTMLTVEDLQQ 488
KLG+N PLIMHG++LLYEVGDDLD++ VANY ANLEK LS+LPSP+ NG++LTVEDLQQ
Sbjct: 461 TKLGMNLPLIMHGNSLLYEVGDDLDDIMVANYNANLEKYLSELPSPILNGSILTVEDLQQ 520
Query: 489 ELTCNINIKHR 499
EL+C IN+KHR
Sbjct: 521 ELSCKINVKHR 531
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The dimeric enzyme acts as a E1 ligase for SUMO1 and SUMO2. It mediates ATP-dependent activation of SUMO proteins and formation of a thioester with a conserved cysteine residue on SAE2. Arabidopsis thaliana (taxid: 3702) EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: - |
| >sp|Q54L40|SAE2_DICDI SUMO-activating enzyme subunit 2 OS=Dictyostelium discoideum GN=uba2 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9UBT2|SAE2_HUMAN SUMO-activating enzyme subunit 2 OS=Homo sapiens GN=UBA2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9Z1F9|SAE2_MOUSE SUMO-activating enzyme subunit 2 OS=Mus musculus GN=Uba2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q28GH3|SAE2_XENTR SUMO-activating enzyme subunit 2 OS=Xenopus tropicalis GN=uba2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7ZY60|SAE2B_XENLA SUMO-activating enzyme subunit 2-B OS=Xenopus laevis GN=uba2-b PE=2 SV=2 | Back alignment and function description |
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| >sp|Q7SXG4|SAE2_DANRE SUMO-activating enzyme subunit 2 OS=Danio rerio GN=uba2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q642Q1|SAE2A_XENLA SUMO-activating enzyme subunit 2-A OS=Xenopus laevis GN=uba2-a PE=2 SV=1 | Back alignment and function description |
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| >sp|O42939|UBA2_SCHPO Ubiquitin-activating enzyme E1-like OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uba2 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9NAN1|SAE2_CAEEL SUMO-activating enzyme subunit uba-2 OS=Caenorhabditis elegans GN=uba-2 PE=3 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 622 | ||||||
| 225428380 | 634 | PREDICTED: SUMO-activating enzyme subuni | 0.948 | 0.930 | 0.781 | 0.0 | |
| 297744435 | 618 | unnamed protein product [Vitis vinifera] | 0.948 | 0.954 | 0.781 | 0.0 | |
| 356544157 | 636 | PREDICTED: SUMO-activating enzyme subuni | 0.953 | 0.932 | 0.756 | 0.0 | |
| 449464696 | 641 | PREDICTED: SUMO-activating enzyme subuni | 0.959 | 0.931 | 0.750 | 0.0 | |
| 255543783 | 644 | ubiquitin-activating enzyme E1b, putativ | 0.924 | 0.892 | 0.784 | 0.0 | |
| 356546382 | 638 | PREDICTED: SUMO-activating enzyme subuni | 0.954 | 0.931 | 0.757 | 0.0 | |
| 449517032 | 641 | PREDICTED: LOW QUALITY PROTEIN: SUMO-act | 0.959 | 0.931 | 0.749 | 0.0 | |
| 224080387 | 610 | predicted protein [Populus trichocarpa] | 0.901 | 0.919 | 0.759 | 0.0 | |
| 224105339 | 662 | predicted protein [Populus trichocarpa] | 0.884 | 0.830 | 0.764 | 0.0 | |
| 30681414 | 625 | SUMO-activating enzyme subunit 2 [Arabid | 0.927 | 0.923 | 0.720 | 0.0 |
| >gi|225428380|ref|XP_002283529.1| PREDICTED: SUMO-activating enzyme subunit 2-like [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/614 (78%), Positives = 525/614 (85%), Gaps = 24/614 (3%)
Query: 12 IDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVKDPKFNVEFF 71
IDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVL+FRP +SIT++HANVKDP FNV+FF
Sbjct: 42 IDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLRFRPHISITSYHANVKDPDFNVDFF 101
Query: 72 KQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPA 131
KQFNVVLNGLDNLDARRHVNRLCLA+DVPLVESGTTGFLGQVTVHVKGKTECYECQPKP
Sbjct: 102 KQFNVVLNGLDNLDARRHVNRLCLASDVPLVESGTTGFLGQVTVHVKGKTECYECQPKPT 161
Query: 132 PKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQENDLNVRSSDASSSAHA-EDVFV 190
PKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQENDLN RSS+A+SS+ EDVF
Sbjct: 162 PKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQENDLNARSSNAASSSQQAEDVFE 221
Query: 191 RRKDEDIDQYGRRIYDHVFGYNIEVASSNEETWKNRNRPKPIYSADVMPENLTEQNGNVA 250
R+ DE ID+Y +RIYDHVFGYNI VA SNEETWKNRNRPKP+YS DV PE ++QNGN+
Sbjct: 222 RQNDEGIDEYAKRIYDHVFGYNIGVALSNEETWKNRNRPKPLYSRDVFPEEPSQQNGNMD 281
Query: 251 KNCVVDTS-SVSAMASLGLKNPQDTWTLLESSRIFLEALKLFFAKREKEIGNLSFDKDDQ 309
KNC D SVSAMASLGLKNPQD W+LLE+SRIFLEALKLFF KREKEIGNLSFDKDDQ
Sbjct: 282 KNCATDDPLSVSAMASLGLKNPQDIWSLLENSRIFLEALKLFFGKREKEIGNLSFDKDDQ 341
Query: 310 LAVEFVTAAANIRAASFGISLHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVLLKD 369
LAVEFVTAAANIRAASFGI LHSLFEAKGIAGNIVHAVATTNA+IAGLIVIEAIKVL +D
Sbjct: 342 LAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLQRD 401
Query: 370 TDKYRMTYCLEHITKKMLLMPVEPYEPNKSCYVCSETPLSLEINTSRSKLRDFVEKIVKA 429
+ YRMTYCLEH ++KMLLMPVEP+EPNKSCYVCSETPL LE+NT RSKLRDFVEKIVKA
Sbjct: 402 ANNYRMTYCLEHPSRKMLLMPVEPFEPNKSCYVCSETPLLLEVNTHRSKLRDFVEKIVKA 461
Query: 430 KLGINFPLIMHGSNLLYEVGDDLDEVEVANYAANLEKVLSQLPSPVTNGTMLTVEDLQQE 489
KLG+N PLIMHG LLYEVGDDLD+ ANYAANLEKVLS+LPSPVT GTMLTVEDLQQE
Sbjct: 462 KLGMNCPLIMHGPALLYEVGDDLDKDMAANYAANLEKVLSELPSPVTGGTMLTVEDLQQE 521
Query: 490 LTCNINIKHREEFDEEKEPDGMLLSGWTQAPPAKDDKQSMNDKQSIGNGGDS-SNALQTE 548
TCNINIKHREEFDEEKEPDGMLLSGWTQAP + D D +++GNGG S SNA
Sbjct: 522 FTCNINIKHREEFDEEKEPDGMLLSGWTQAPRVEKD-----DNKTVGNGGSSTSNASSAM 576
Query: 549 PADAVKDGEMEEISEPSGKKRKLSEGSKASILDATDGTRNHKEVEKLDDDDDDDDDVVMF 608
P +A +D ++E + P+GKKRK+ E SKA+ + +D DDD +VM
Sbjct: 577 PVEAEEDDDIEFV--PTGKKRKVGEISKATNPNLSDVA--------------DDDVLVML 620
Query: 609 DDLDSMTNKKKRLQ 622
D + NKKK+LQ
Sbjct: 621 DGENLDINKKKKLQ 634
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297744435|emb|CBI37697.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356544157|ref|XP_003540521.1| PREDICTED: SUMO-activating enzyme subunit 2-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449464696|ref|XP_004150065.1| PREDICTED: SUMO-activating enzyme subunit 2-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255543783|ref|XP_002512954.1| ubiquitin-activating enzyme E1b, putative [Ricinus communis] gi|223547965|gb|EEF49457.1| ubiquitin-activating enzyme E1b, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356546382|ref|XP_003541605.1| PREDICTED: SUMO-activating enzyme subunit 2-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449517032|ref|XP_004165550.1| PREDICTED: LOW QUALITY PROTEIN: SUMO-activating enzyme subunit 2-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224080387|ref|XP_002306122.1| predicted protein [Populus trichocarpa] gi|222849086|gb|EEE86633.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224105339|ref|XP_002313776.1| predicted protein [Populus trichocarpa] gi|222850184|gb|EEE87731.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|30681414|ref|NP_179742.2| SUMO-activating enzyme subunit 2 [Arabidopsis thaliana] gi|26450535|dbj|BAC42380.1| putative ubiquitin activating enzyme [Arabidopsis thaliana] gi|208879522|gb|ACI31306.1| At2g21470 [Arabidopsis thaliana] gi|330252087|gb|AEC07181.1| SUMO-activating enzyme subunit 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 622 | ||||||
| TAIR|locus:2050069 | 700 | SAE2 "SUMO-activating enzyme 2 | 0.805 | 0.715 | 0.781 | 1.5e-225 | |
| DICTYBASE|DDB_G0286919 | 661 | uba2 "sumo-activating enzyme s | 0.765 | 0.720 | 0.400 | 8.4e-97 | |
| ZFIN|ZDB-GENE-040426-2681 | 651 | uba2 "ubiquitin-like modifier | 0.905 | 0.864 | 0.363 | 4.6e-89 | |
| UNIPROTKB|Q9UBT2 | 640 | UBA2 "SUMO-activating enzyme s | 0.866 | 0.842 | 0.381 | 7.5e-89 | |
| UNIPROTKB|Q28GH3 | 641 | uba2 "SUMO-activating enzyme s | 0.848 | 0.823 | 0.379 | 2.5e-88 | |
| UNIPROTKB|E2R837 | 640 | UBA2 "Uncharacterized protein" | 0.885 | 0.860 | 0.381 | 3.2e-88 | |
| MGI|MGI:1858313 | 638 | Uba2 "ubiquitin-like modifier | 0.864 | 0.843 | 0.383 | 4.1e-88 | |
| UNIPROTKB|F1NV31 | 591 | UBA2 "Uncharacterized protein" | 0.858 | 0.903 | 0.385 | 1.1e-87 | |
| UNIPROTKB|A4FV12 | 640 | UBA2 "UBA2 protein" [Bos tauru | 0.864 | 0.840 | 0.384 | 1.1e-87 | |
| UNIPROTKB|Q7ZY60 | 641 | uba2-b "SUMO-activating enzyme | 0.871 | 0.845 | 0.371 | 2.9e-87 |
| TAIR|locus:2050069 SAE2 "SUMO-activating enzyme 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2061 (730.6 bits), Expect = 1.5e-225, Sum P(2) = 1.5e-225
Identities = 397/508 (78%), Positives = 447/508 (87%)
Query: 12 IDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVKDPKFNVEFF 71
IDMDTIEVSNLNRQFLFR+SHVGQSKAKVARDAVL+FRP ++I ++HANVK+P+F+V+FF
Sbjct: 42 IDMDTIEVSNLNRQFLFRRSHVGQSKAKVARDAVLRFRPNINIRSYHANVKNPEFDVDFF 101
Query: 72 KQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPA 131
KQF+VVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVH+KGKTECYECQ KPA
Sbjct: 102 KQFDVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHIKGKTECYECQTKPA 161
Query: 132 PKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQENDLNVRXXXXXXXXX-XEDVFV 190
PKTYPVCTITSTP+KFVHCIVWAKDLLFAKLFGDKNQ+NDLNVR EDVF
Sbjct: 162 PKTYPVCTITSTPTKFVHCIVWAKDLLFAKLFGDKNQDNDLNVRSNNSASSSKETEDVFE 221
Query: 191 RRKDEDIDQYGRRIYDHVFGYNIEVASSNEETWKNRNRPKPIYSADVMPENLTEQNGNVA 250
R +DEDI+QYGR+IYDHVFG NIE A SNEETWKNR RP+PIYS DV+PE+LT+QNG+
Sbjct: 222 RSEDEDIEQYGRKIYDHVFGSNIEAALSNEETWKNRRRPRPIYSKDVLPESLTQQNGST- 280
Query: 251 KNCVVDTSS--VSAMASLGLKNPQDTWTLLESSRIFLEALKLFFAKREKEIGNLSFDKDD 308
+NC V VSAM SLGLKNPQ+ W L ++S +F+EALKLFFAKR+KEIG+L+FDKDD
Sbjct: 281 QNCSVTDGDLMVSAMPSLGLKNPQELWGLTQNSLVFIEALKLFFAKRKKEIGHLTFDKDD 340
Query: 309 QLAVEFVTAAANIRAASFGISLHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVLLK 368
QLAVEFVTAAANIRA SFGI LHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVL K
Sbjct: 341 QLAVEFVTAAANIRAESFGIPLHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVLKK 400
Query: 369 DTDKYRMTYCLEHITKKMLLMPVEPYEPNKSCYVCSETPLSLEINTSRSKLRDFVEKIVK 428
D DK+RMTYCLEH +KK+LLMP+EPYEPN +CYVCSETPL LEINT +SKLRD V+KIVK
Sbjct: 401 DVDKFRMTYCLEHPSKKLLLMPIEPYEPNPACYVCSETPLVLEINTRKSKLRDLVDKIVK 460
Query: 429 AKLGINFPLIMHGSNLLYEVGDDLDEVEVANYAANLEKVLSQLPSPVTNGTMLTVEDLQQ 488
KLG+N PLIMHG++LLYEVGDDLD++ VANY ANLEK LS+LPSP+ NG++LTVEDLQQ
Sbjct: 461 TKLGMNLPLIMHGNSLLYEVGDDLDDIMVANYNANLEKYLSELPSPILNGSILTVEDLQQ 520
Query: 489 ELTCNINIKHREEFDEEKEPDGMLLSGW 516
EL+C IN+KHR F E P +L S W
Sbjct: 521 ELSCKINVKHRF-FSEILNP--VLNSVW 545
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| DICTYBASE|DDB_G0286919 uba2 "sumo-activating enzyme subunit 2" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-2681 uba2 "ubiquitin-like modifier activating enzyme 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9UBT2 UBA2 "SUMO-activating enzyme subunit 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q28GH3 uba2 "SUMO-activating enzyme subunit 2" [Xenopus (Silurana) tropicalis (taxid:8364)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2R837 UBA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| MGI|MGI:1858313 Uba2 "ubiquitin-like modifier activating enzyme 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NV31 UBA2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A4FV12 UBA2 "UBA2 protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q7ZY60 uba2-b "SUMO-activating enzyme subunit 2-B" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9UBT2 | SAE2_HUMAN | 6, ., 3, ., 2, ., - | 0.3747 | 0.8633 | 0.8390 | yes | no |
| Q9Z1F9 | SAE2_MOUSE | 6, ., 3, ., 2, ., - | 0.3706 | 0.8842 | 0.8620 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 622 | |||
| cd01489 | 312 | cd01489, Uba2_SUMO, Ubiquitin activating enzyme (E | 1e-113 | |
| cd01484 | 234 | cd01484, E1-2_like, Ubiquitin activating enzyme (E | 1e-56 | |
| cd01489 | 312 | cd01489, Uba2_SUMO, Ubiquitin activating enzyme (E | 2e-47 | |
| cd01490 | 435 | cd01490, Ube1_repeat2, Ubiquitin activating enzyme | 2e-46 | |
| cd01488 | 291 | cd01488, Uba3_RUB, Ubiquitin activating enzyme (E1 | 3e-46 | |
| TIGR01408 | 1008 | TIGR01408, Ube1, ubiquitin-activating enzyme E1 | 1e-35 | |
| pfam00899 | 134 | pfam00899, ThiF, ThiF family | 1e-32 | |
| cd00757 | 228 | cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA | 1e-31 | |
| COG0476 | 254 | COG0476, ThiF, Dinucleotide-utilizing enzymes invo | 9e-29 | |
| pfam02134 | 66 | pfam02134, UBACT, Repeat in ubiquitin-activating ( | 2e-25 | |
| cd01483 | 143 | cd01483, E1_enzyme_family, Superfamily of activati | 2e-23 | |
| pfam10585 | 44 | pfam10585, UBA_e1_thiolCys, Ubiquitin-activating e | 3e-22 | |
| TIGR02356 | 202 | TIGR02356, adenyl_thiF, thiazole biosynthesis aden | 1e-19 | |
| PRK05690 | 245 | PRK05690, PRK05690, molybdopterin biosynthesis pro | 4e-19 | |
| TIGR02355 | 240 | TIGR02355, moeB, molybdopterin synthase sulfurylas | 3e-18 | |
| PRK08762 | 376 | PRK08762, PRK08762, molybdopterin biosynthesis pro | 8e-18 | |
| PRK07878 | 392 | PRK07878, PRK07878, molybdopterin biosynthesis-lik | 3e-15 | |
| cd01490 | 435 | cd01490, Ube1_repeat2, Ubiquitin activating enzyme | 4e-15 | |
| PRK05600 | 370 | PRK05600, PRK05600, thiamine biosynthesis protein | 4e-13 | |
| cd00755 | 231 | cd00755, YgdL_like, Family of activating enzymes ( | 4e-12 | |
| cd01484 | 234 | cd01484, E1-2_like, Ubiquitin activating enzyme (E | 2e-11 | |
| PRK05597 | 355 | PRK05597, PRK05597, molybdopterin biosynthesis pro | 2e-11 | |
| COG1179 | 263 | COG1179, COG1179, Dinucleotide-utilizing enzymes i | 1e-10 | |
| cd01488 | 291 | cd01488, Uba3_RUB, Ubiquitin activating enzyme (E1 | 8e-10 | |
| TIGR01408 | 1008 | TIGR01408, Ube1, ubiquitin-activating enzyme E1 | 1e-09 | |
| PRK07411 | 390 | PRK07411, PRK07411, hypothetical protein; Validate | 2e-08 | |
| PRK08328 | 231 | PRK08328, PRK08328, hypothetical protein; Provisio | 4e-08 | |
| cd01492 | 197 | cd01492, Aos1_SUMO, Ubiquitin activating enzyme (E | 7e-08 | |
| PRK08644 | 212 | PRK08644, PRK08644, thiamine biosynthesis protein | 1e-07 | |
| cd01487 | 174 | cd01487, E1_ThiF_like, E1_ThiF_like | 3e-07 | |
| PRK12475 | 338 | PRK12475, PRK12475, thiamine/molybdopterin biosynt | 2e-06 | |
| PRK08223 | 287 | PRK08223, PRK08223, hypothetical protein; Validate | 4e-06 | |
| TIGR02354 | 200 | TIGR02354, thiF_fam2, thiamine biosynthesis protei | 7e-06 | |
| PRK15116 | 268 | PRK15116, PRK15116, sulfur acceptor protein CsdL; | 8e-06 | |
| PRK07688 | 339 | PRK07688, PRK07688, thiamine/molybdopterin biosynt | 4e-05 | |
| PRK14851 | 679 | PRK14851, PRK14851, hypothetical protein; Provisio | 4e-04 | |
| PRK14852 | 989 | PRK14852, PRK14852, hypothetical protein; Provisio | 0.002 |
| >gnl|CDD|238766 cd01489, Uba2_SUMO, Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Score = 340 bits (874), Expect = e-113
Identities = 122/226 (53%), Positives = 148/226 (65%), Gaps = 44/226 (19%)
Query: 12 IDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVKDPKFNVEFF 71
ID+DTI++SNLNRQFLFR+ HVG+SKA+VA++AVL F P + I A+HAN+KDP FNVEFF
Sbjct: 29 IDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKDPDFNVEFF 88
Query: 72 KQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPA 131
KQF++V N LDNL ARRHVN++CLAADVPL+ESGTTGFLGQV V KGKTECYECQPK
Sbjct: 89 KQFDLVFNALDNLAARRHVNKMCLAADVPLIESGTTGFLGQVQVIKKGKTECYECQPKET 148
Query: 132 PKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQENDLNVRSSDASSSAHAEDVFVR 191
PKT+PVCTI STPS+ +HCIVWAK L F
Sbjct: 149 PKTFPVCTIRSTPSQPIHCIVWAKSLFF-------------------------------- 176
Query: 192 RKDEDIDQYGRRIYDHVFGYNIEVASSNEETWKNRNRPKPIYSADV 237
+++ VF +IE S EE WK R P P+ ++
Sbjct: 177 ------------LFNKVFKDDIERLLSMEELWKTRKPPVPLSWKEL 210
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. Length = 312 |
| >gnl|CDD|238761 cd01484, E1-2_like, Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
| >gnl|CDD|238766 cd01489, Uba2_SUMO, Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
| >gnl|CDD|238767 cd01490, Ube1_repeat2, Ubiquitin activating enzyme (E1), repeat 2 | Back alignment and domain information |
|---|
| >gnl|CDD|238765 cd01488, Uba3_RUB, Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
| >gnl|CDD|130475 TIGR01408, Ube1, ubiquitin-activating enzyme E1 | Back alignment and domain information |
|---|
| >gnl|CDD|216180 pfam00899, ThiF, ThiF family | Back alignment and domain information |
|---|
| >gnl|CDD|238386 cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA | Back alignment and domain information |
|---|
| >gnl|CDD|223552 COG0476, ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|202124 pfam02134, UBACT, Repeat in ubiquitin-activating (UBA) protein | Back alignment and domain information |
|---|
| >gnl|CDD|238760 cd01483, E1_enzyme_family, Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|192635 pfam10585, UBA_e1_thiolCys, Ubiquitin-activating enzyme active site | Back alignment and domain information |
|---|
| >gnl|CDD|162820 TIGR02356, adenyl_thiF, thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
| >gnl|CDD|180204 PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|131408 TIGR02355, moeB, molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
| >gnl|CDD|236337 PRK08762, PRK08762, molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|181156 PRK07878, PRK07878, molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|238767 cd01490, Ube1_repeat2, Ubiquitin activating enzyme (E1), repeat 2 | Back alignment and domain information |
|---|
| >gnl|CDD|235528 PRK05600, PRK05600, thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|238384 cd00755, YgdL_like, Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
| >gnl|CDD|238761 cd01484, E1-2_like, Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
| >gnl|CDD|235526 PRK05597, PRK05597, molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|224100 COG1179, COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|238765 cd01488, Uba3_RUB, Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
| >gnl|CDD|130475 TIGR01408, Ube1, ubiquitin-activating enzyme E1 | Back alignment and domain information |
|---|
| >gnl|CDD|180967 PRK07411, PRK07411, hypothetical protein; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|169382 PRK08328, PRK08328, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238769 cd01492, Aos1_SUMO, Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
| >gnl|CDD|236320 PRK08644, PRK08644, thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238764 cd01487, E1_ThiF_like, E1_ThiF_like | Back alignment and domain information |
|---|
| >gnl|CDD|183547 PRK12475, PRK12475, thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|181302 PRK08223, PRK08223, hypothetical protein; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|162819 TIGR02354, thiF_fam2, thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
| >gnl|CDD|185071 PRK15116, PRK15116, sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|181084 PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|184853 PRK14851, PRK14851, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|184854 PRK14852, PRK14852, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 622 | |||
| KOG2013 | 603 | consensus SMT3/SUMO-activating complex, catalytic | 100.0 | |
| TIGR01408 | 1008 | Ube1 ubiquitin-activating enzyme E1. This model re | 100.0 | |
| cd01490 | 435 | Ube1_repeat2 Ubiquitin activating enzyme (E1), rep | 100.0 | |
| KOG2012 | 1013 | consensus Ubiquitin activating enzyme UBA1 [Posttr | 100.0 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 100.0 | |
| KOG2015 | 422 | consensus NEDD8-activating complex, catalytic comp | 100.0 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 100.0 | |
| cd01488 | 291 | Uba3_RUB Ubiquitin activating enzyme (E1) subunit | 100.0 | |
| PRK08223 | 287 | hypothetical protein; Validated | 99.96 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 99.95 | |
| PRK07411 | 390 | hypothetical protein; Validated | 99.95 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 99.95 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 99.95 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 99.94 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 99.94 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 99.94 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 99.94 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 99.93 | |
| COG0476 | 254 | ThiF Dinucleotide-utilizing enzymes involved in mo | 99.93 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 99.93 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 99.93 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 99.92 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 99.92 | |
| KOG2017 | 427 | consensus Molybdopterin synthase sulfurylase [Coen | 99.92 | |
| TIGR03736 | 244 | PRTRC_ThiF PRTRC system ThiF family protein. A nov | 99.91 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 99.9 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 99.89 | |
| PF02134 | 67 | UBACT: Repeat in ubiquitin-activating (UBA) protei | 99.89 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 99.89 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 99.89 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 99.89 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 99.89 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 99.88 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 99.88 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 99.88 | |
| TIGR03603 | 318 | cyclo_dehy_ocin bacteriocin biosynthesis cyclodehy | 99.87 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 99.87 | |
| cd01493 | 425 | APPBP1_RUB Ubiquitin activating enzyme (E1) subuni | 99.85 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 99.85 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 99.84 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 99.79 | |
| TIGR01408 | 1008 | Ube1 ubiquitin-activating enzyme E1. This model re | 99.79 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 99.77 | |
| KOG2336 | 422 | consensus Molybdopterin biosynthesis-related prote | 99.77 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 99.75 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 99.75 | |
| PF14732 | 87 | UAE_UbL: Ubiquitin/SUMO-activating enzyme ubiquiti | 99.69 | |
| PF10585 | 45 | UBA_e1_thiolCys: Ubiquitin-activating enzyme activ | 99.53 | |
| KOG2014 | 331 | consensus SMT3/SUMO-activating complex, AOS1/RAD31 | 99.4 | |
| KOG2018 | 430 | consensus Predicted dinucleotide-utilizing enzyme | 99.36 | |
| PTZ00245 | 287 | ubiquitin activating enzyme; Provisional | 99.26 | |
| KOG2012 | 1013 | consensus Ubiquitin activating enzyme UBA1 [Posttr | 99.19 | |
| KOG2016 | 523 | consensus NEDD8-activating complex, APP-BP1/UBA5 c | 99.14 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 99.02 | |
| KOG2337 | 669 | consensus Ubiquitin activating E1 enzyme-like prot | 98.92 | |
| PF08825 | 84 | E2_bind: E2 binding domain; InterPro: IPR014929 E1 | 98.79 | |
| PF09358 | 125 | UBA_e1_C: Ubiquitin-activating enzyme e1 C-termina | 98.76 | |
| cd01490 | 435 | Ube1_repeat2 Ubiquitin activating enzyme (E1), rep | 97.6 | |
| PF05237 | 84 | MoeZ_MoeB: MoeZ/MoeB domain; InterPro: IPR007901 T | 93.86 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 93.4 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 91.31 | |
| TIGR03882 | 193 | cyclo_dehyd_2 bacteriocin biosynthesis cyclodehydr | 91.02 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 89.86 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 88.61 | |
| TIGR03603 | 318 | cyclo_dehy_ocin bacteriocin biosynthesis cyclodehy | 87.67 | |
| COG4015 | 217 | Predicted dinucleotide-utilizing enzyme of the Thi | 84.54 | |
| PF14560 | 87 | Ubiquitin_2: Ubiquitin-like domain; PDB: 1WJN_A 2K | 83.4 | |
| PF11543 | 80 | UN_NPL4: Nuclear pore localisation protein NPL4; I | 82.37 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 80.01 |
| >KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-111 Score=891.63 Aligned_cols=483 Identities=48% Similarity=0.752 Sum_probs=407.7
Q ss_pred CcccCccEEEEEeCCccCccccccccCCCccccCchHHHHHHHHHHhhCCCCeEEEEeccCCCCCchhhhhccCCEEEEe
Q 006996 1 MVSERQLEAIKIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVKDPKFNVEFFKQFNVVLNG 80 (622)
Q Consensus 1 lv~~GvG~I~IvD~DtIe~SNLnRQfLf~~~dIGk~KaevAa~~l~~~NP~v~I~a~~~~i~~~~~~~~f~~~~DlVi~a 80 (622)
|+.+|.++|||||+|||++||||||||||++|||++||.||++.++++||++++.+|+++|++..|+.+||+|||+|+||
T Consensus 31 Lal~gf~~IhiIDlDTIDlSNLNRQFLFrkkhVgqsKA~vA~~~v~~Fnpn~~l~~yhanI~e~~fnv~ff~qfdiV~Na 110 (603)
T KOG2013|consen 31 LALTGFEEIHIIDLDTIDLSNLNRQFLFRKKHVGQSKATVAAKAVKQFNPNIKLVPYHANIKEPKFNVEFFRQFDIVLNA 110 (603)
T ss_pred HHHhcCCeeEEEeccceeccchhhhheeehhhcCchHHHHHHHHHHHhCCCCceEeccccccCcchHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeccccccceEEEEeCCCCccccccCCCCCCCCCcccccCCCCCceeeehhhhHHHHH
Q 006996 81 LDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFA 160 (622)
Q Consensus 81 lDn~~aR~~vn~~c~~~~iPlI~sGt~G~~G~v~vi~p~~t~Cy~C~~~~~~~~~P~CTi~~~P~~~~hcI~wa~~~~f~ 160 (622)
|||.+||+|||++|+.+++|||+|||.||.|||++|.+|.|+||+|.++|.|++||+|||||+|+.|+|||+|||+++|.
T Consensus 111 LDNlaAR~yVNr~C~~a~vPLIesGt~Gf~GQv~~ii~GkTECyeC~pK~~~kTypvCTIRstPS~~iHCIVWAK~~lF~ 190 (603)
T KOG2013|consen 111 LDNLAARRYVNRMCLAASVPLIESGTGGFLGQVQVIIKGKTECYECIPKPVPKTYPVCTIRSTPSEPIHCIVWAKHYLFN 190 (603)
T ss_pred hccHHHHHHHHHHHHhhcCCceecCcccccceEEEEecCCcceecccCCCCCCcCCceEeecCCCCceeeeeehHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCccc--ccccCCCcc---------cchhhHHhhhhcCChhhHHHHH-----HHhhhccccccHHHHhcCCcccC
Q 006996 161 KLFGDKNQEN--DLNVRSSDA---------SSSAHAEDVFVRRKDEDIDQYG-----RRIYDHVFGYNIEVASSNEETWK 224 (622)
Q Consensus 161 ~lF~~~~~~~--dl~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~a-----~~lf~~~F~~~I~~Ll~~~~~W~ 224 (622)
+|||+..... ..+....+. ...+...++++++......... ..+|+++|..||++||.|+..|+
T Consensus 191 qlF~~d~~~q~~~~d~~d~d~~e~~t~~~~~~~~et~d~~Er~~~i~~~~~~~~~~~~~i~~klF~~dI~yl~~~e~~wk 270 (603)
T KOG2013|consen 191 QLFGEDDDDQYGRHDNADPDNCEDMTEEEAEAFRETEDLKERRESIVEIDKNLDFGPFKIFNKLFIYDIEYLLGMEALWK 270 (603)
T ss_pred HHhccccccccccccccCchhhhccChhhhhhhccchHHHHHHHHHHHHhhccCCChhhhhhHHHHHHHHHHHhhhhhcc
Confidence 9999744321 111111110 0111223333333222222222 56899999999999999999999
Q ss_pred CCCCCCcccCCCCCCcchhhhcccccccccccchhhhHHhhcCCCCCCCccccccchHHHHHHHHHHHHhhhhccCC--c
Q 006996 225 NRNRPKPIYSADVMPENLTEQNGNVAKNCVVDTSSVSAMASLGLKNPQDTWTLLESSRIFLEALKLFFAKREKEIGN--L 302 (622)
Q Consensus 225 ~rr~P~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~e~~~~f~~~~~~~~~~~~~~~~~--l 302 (622)
.|++|.||+|...+.....+.+... + +.--...++|.+|++.++..+|..+++.+.-+..+.... +
T Consensus 271 ~r~~p~pl~~~~~i~~~~~t~ns~~----------q--~~~~a~~~~~~v~~v~~~~~vf~~~i~~l~~~~~~~~~h~~l 338 (603)
T KOG2013|consen 271 PRSRPVPLSIAEVISTSLETINSIV----------Q--SITSAQLNDQNVWTVDEGAVVFRLSIQALDLRCPKESDHWYL 338 (603)
T ss_pred CCCCCCCcchhhccCCccccccchh----------h--hccccccCCcceeeeccccHHHHHHHHHhcccCCccCCCceE
Confidence 9999999999876655443322111 0 111134578999999999999999999986665554455 8
Q ss_pred cCCCCcHhHHHHHHHHHHHHHHHcCCCCCCHHHHHhhhcccccchhhhHHHHHHHHHHHHHHHHhcCcccceeeEeeccc
Q 006996 303 SFDKDDQLAVEFVTAAANIRAASFGISLHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVLLKDTDKYRMTYCLEHI 382 (622)
Q Consensus 303 ~FDKDD~~h~dFV~AaaNLRA~~f~I~~~s~~~vK~iAGnIIPAIATTnAiVAGl~vlE~~Kvl~~~~~~~r~~f~~~~~ 382 (622)
.|||||...|+||+||||+||++|+||++|+|++|+||||||||||||||||||++|+|++|+|++....++++|+..+|
T Consensus 339 ~fdKdd~~~~~FVaaaaNiRa~if~ipmkS~Fdik~mAgnIipaIAtTNAiIagliv~eaiKvl~~~~~~~~~~f~~~~~ 418 (603)
T KOG2013|consen 339 IFDKDDASTMEFVAAAANIRAHIFGIPMKSLFDIKQMAGNIIPAIATTNAIIAGLIVTEAIKVLGGDFDDCNMIFLAKRP 418 (603)
T ss_pred EEcCCcHHHHHHHHHHhhhhhhhhccchhhhhchHhHhcccchhhhhhhhHHHHHHHHHHHHHhccchhcceeeEEccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999884
Q ss_pred c-cceeecccCCCCCCCCcccCCcccEEEEEcCCCCCHHHHHHHHHHHhcCCCCcceeec-CcEEEeeCCCccHHHHHHH
Q 006996 383 T-KKMLLMPVEPYEPNKSCYVCSETPLSLEINTSRSKLRDFVEKIVKAKLGINFPLIMHG-SNLLYEVGDDLDEVEVANY 460 (622)
Q Consensus 383 ~-~~~~~~~~~~~~pn~~C~vC~~~~~~l~i~~~~~TL~~li~~ilk~~~~~~~~~I~~g-~~~LY~~~~~l~~~~~~~~ 460 (622)
. +++++.|..+.||||.||||+...+.++++...+||..|+++|+|.+++| .|.|+.- ..++|+. .|
T Consensus 419 n~r~r~l~~~~~~~PNp~C~vCs~~~~~l~ln~~~~~~~~L~D~ivk~r~~~-~pdvsll~~~Li~~~----------d~ 487 (603)
T KOG2013|consen 419 NPRKRVLLPWALRPPNPNCPVCSEVPLVLELNTRKSTLRDLVDKIVKTRLGY-LPDVSLLDDDLIDDM----------DF 487 (603)
T ss_pred CccceeecccccCCCCCCCccccccceEEEeccccchHHHHHHHHHHHHhcc-Ccccchhhhhhcccc----------cc
Confidence 3 78899999999999999999998899999999999999999999999999 6776543 3455543 37
Q ss_pred hhhhhcccccCCCCCCCCcEEEEeeCCCCeEEEEEEEeccCCCCCCCCCc
Q 006996 461 AANLEKVLSQLPSPVTNGTMLTVEDLQQELTCNINIKHREEFDEEKEPDG 510 (622)
Q Consensus 461 ~~nl~k~L~el~~~i~~g~~l~v~D~~~~~~~~l~i~~~~~~~~~~~~~~ 510 (622)
++|+.|+|+|| ||.+|+.+.+-|.-.+-.++ +...+.-..+..|..
T Consensus 488 e~n~~k~lsel--~i~ngsli~~~~e~~d~~~~--~~~~~~~~~~~l~~~ 533 (603)
T KOG2013|consen 488 EDNLDKTLSEL--GILNGSLINVKDEILDPVLE--VHFTESRNTEGLPLD 533 (603)
T ss_pred hhhhhhhHHhh--CCCCCceEeeecccCCccee--eeecccccccccchh
Confidence 89999999999 99999999999976665555 333333334556653
|
|
| >TIGR01408 Ube1 ubiquitin-activating enzyme E1 | Back alignment and domain information |
|---|
| >cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2 | Back alignment and domain information |
|---|
| >KOG2012 consensus Ubiquitin activating enzyme UBA1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
| >KOG2015 consensus NEDD8-activating complex, catalytic component UBA3 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
| >cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
| >COG0476 ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
| >KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein | Back alignment and domain information |
|---|
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
| >PF02134 UBACT: Repeat in ubiquitin-activating (UBA) protein; InterPro: IPR000127 The post-translational attachment of ubiquitin (IPR000626 from INTERPRO) to proteins (ubiquitinylation) alters the function, location or trafficking of a protein, or targets it to the 26S proteasome for degradation [, , ] | Back alignment and domain information |
|---|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
| >TIGR03603 cyclo_dehy_ocin bacteriocin biosynthesis cyclodehydratase, SagC family | Back alignment and domain information |
|---|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1 | Back alignment and domain information |
|---|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
| >TIGR01408 Ube1 ubiquitin-activating enzyme E1 | Back alignment and domain information |
|---|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >KOG2336 consensus Molybdopterin biosynthesis-related protein [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
| >PF14732 UAE_UbL: Ubiquitin/SUMO-activating enzyme ubiquitin-like domain; PDB: 1Y8Q_B 1Y8R_E 3KYD_B 3KYC_B | Back alignment and domain information |
|---|
| >PF10585 UBA_e1_thiolCys: Ubiquitin-activating enzyme active site ; InterPro: IPR019572 Ubiquitin-activating enzyme (E1 enzyme) activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
| >KOG2014 consensus SMT3/SUMO-activating complex, AOS1/RAD31 component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PTZ00245 ubiquitin activating enzyme; Provisional | Back alignment and domain information |
|---|
| >KOG2012 consensus Ubiquitin activating enzyme UBA1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2016 consensus NEDD8-activating complex, APP-BP1/UBA5 component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
| >KOG2337 consensus Ubiquitin activating E1 enzyme-like protein [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
| >PF08825 E2_bind: E2 binding domain; InterPro: IPR014929 E1 and E2 enzymes play a central role in ubiquitin and ubiquitin-like protein transfer cascades | Back alignment and domain information |
|---|
| >PF09358 UBA_e1_C: Ubiquitin-activating enzyme e1 C-terminal domain; InterPro: IPR018965 This presumed domain found at the C terminus of Ubiquitin-activating enzyme e1 proteins is functionally uncharacterised | Back alignment and domain information |
|---|
| >cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2 | Back alignment and domain information |
|---|
| >PF05237 MoeZ_MoeB: MoeZ/MoeB domain; InterPro: IPR007901 This putative domain is found in the MoeZ protein and the MoeB protein | Back alignment and domain information |
|---|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03882 cyclo_dehyd_2 bacteriocin biosynthesis cyclodehydratase domain | Back alignment and domain information |
|---|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
| >TIGR03603 cyclo_dehy_ocin bacteriocin biosynthesis cyclodehydratase, SagC family | Back alignment and domain information |
|---|
| >COG4015 Predicted dinucleotide-utilizing enzyme of the ThiF/HesA family [General function prediction only] | Back alignment and domain information |
|---|
| >PF14560 Ubiquitin_2: Ubiquitin-like domain; PDB: 1WJN_A 2KJ6_A 2KJR_A 1V6E_A 1T0Y_A | Back alignment and domain information |
|---|
| >PF11543 UN_NPL4: Nuclear pore localisation protein NPL4; InterPro: IPR024682 Npl4, along with Ufd1, forms the heterodimer adaptor complex UN, which is involved in the recruitment of p97, an AAA ATPase, for tasks involving the ubiquitin pathway | Back alignment and domain information |
|---|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 622 | ||||
| 3kyc_B | 660 | Human Sumo E1 Complex With A Sumo1-Amp Mimic Length | 6e-95 | ||
| 1y8q_B | 640 | Sumo E1 Activating Enzyme Sae1-Sae2-Mg-Atp Complex | 4e-94 | ||
| 3kyd_B | 551 | Human Sumo E1~sumo1-amp Tetrahedral Intermediate Mi | 2e-92 | ||
| 4ii2_A | 1001 | Crystal Structure Of Ubiquitin Activating Enzyme 1 | 2e-28 | ||
| 4ii2_A | 1001 | Crystal Structure Of Ubiquitin Activating Enzyme 1 | 1e-07 | ||
| 2nvu_B | 805 | Structure Of Appbp1-Uba3~nedd8-Nedd8-Mgatp-Ubc12(C1 | 7e-27 | ||
| 3gzn_B | 463 | Structure Of Nedd8-Activating Enzyme In Complex Wit | 1e-26 | ||
| 1tt5_B | 434 | Structure Of Appbp1-Uba3-Ubc12n26: A Unique E1-E2 I | 2e-26 | ||
| 1yov_B | 444 | Insights Into The Ubiquitin Transfer Cascade From T | 2e-26 | ||
| 3cmm_A | 1015 | Crystal Structure Of The Uba1-Ubiquitin Complex Len | 4e-26 | ||
| 3cmm_A | 1015 | Crystal Structure Of The Uba1-Ubiquitin Complex Len | 2e-06 | ||
| 3dbh_B | 434 | Structural Dissection Of A Gating Mechanism Prevent | 2e-25 | ||
| 3dbr_B | 434 | Structural Dissection Of A Gating Mechanism Prevent | 2e-25 | ||
| 3dbl_B | 434 | Structural Dissection Of A Gating Mechanism Prevent | 3e-25 | ||
| 1r4m_B | 431 | Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Com | 3e-25 | ||
| 2px9_A | 217 | The Intrinsic Affinity Between E2 And The Cys Domai | 1e-17 | ||
| 1jwb_B | 249 | Structure Of The Covalent Acyl-Adenylate Form Of Th | 2e-14 | ||
| 1zfn_A | 253 | Structural Analysis Of Escherichia Coli Thif Length | 3e-10 | ||
| 1zud_1 | 251 | Structure Of This-Thif Protein Complex Length = 251 | 4e-10 | ||
| 3h5a_A | 358 | Crystal Structure Of E. Coli Mccb Length = 358 | 4e-09 | ||
| 3h5n_A | 353 | Crystal Structure Of E. Coli Mccb + Atp Length = 35 | 4e-09 | ||
| 3guc_A | 292 | Human Ubiquitin-Activating Enzyme 5 In Complex With | 3e-07 |
| >pdb|3KYC|B Chain B, Human Sumo E1 Complex With A Sumo1-Amp Mimic Length = 660 | Back alignment and structure |
|
| >pdb|1Y8Q|B Chain B, Sumo E1 Activating Enzyme Sae1-Sae2-Mg-Atp Complex Length = 640 | Back alignment and structure |
| >pdb|3KYD|B Chain B, Human Sumo E1~sumo1-amp Tetrahedral Intermediate Mimic Length = 551 | Back alignment and structure |
| >pdb|4II2|A Chain A, Crystal Structure Of Ubiquitin Activating Enzyme 1 (uba1) In Complex With The Ub E2 Ubc4, Ubiquitin, And Atp/mg Length = 1001 | Back alignment and structure |
| >pdb|4II2|A Chain A, Crystal Structure Of Ubiquitin Activating Enzyme 1 (uba1) In Complex With The Ub E2 Ubc4, Ubiquitin, And Atp/mg Length = 1001 | Back alignment and structure |
| >pdb|2NVU|B Chain B, Structure Of Appbp1-Uba3~nedd8-Nedd8-Mgatp-Ubc12(C111a), A Trapped Ubiquitin-Like Protein Activation Complex Length = 805 | Back alignment and structure |
| >pdb|3GZN|B Chain B, Structure Of Nedd8-Activating Enzyme In Complex With Nedd8 And Mln4924 Length = 463 | Back alignment and structure |
| >pdb|1TT5|B Chain B, Structure Of Appbp1-Uba3-Ubc12n26: A Unique E1-E2 Interaction Required For Optimal Conjugation Of The Ubiquitin-Like Protein Nedd8 Length = 434 | Back alignment and structure |
| >pdb|1YOV|B Chain B, Insights Into The Ubiquitin Transfer Cascade From The Refined Structure Of The Activating Enzyme For Nedd8 Length = 444 | Back alignment and structure |
| >pdb|3CMM|A Chain A, Crystal Structure Of The Uba1-Ubiquitin Complex Length = 1015 | Back alignment and structure |
| >pdb|3CMM|A Chain A, Crystal Structure Of The Uba1-Ubiquitin Complex Length = 1015 | Back alignment and structure |
| >pdb|3DBH|B Chain B, Structural Dissection Of A Gating Mechanism Preventing Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1- Uba3arg190ala-Nedd8ala72arg) Length = 434 | Back alignment and structure |
| >pdb|3DBR|B Chain B, Structural Dissection Of A Gating Mechanism Preventing Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1- Uba3arg190gln-Nedd8ala72arg) Length = 434 | Back alignment and structure |
| >pdb|3DBL|B Chain B, Structural Dissection Of A Gating Mechanism Preventing Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1- Uba3arg190wt-Nedd8ala72gln) Length = 434 | Back alignment and structure |
| >pdb|1R4M|B Chain B, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex Length = 431 | Back alignment and structure |
| >pdb|2PX9|A Chain A, The Intrinsic Affinity Between E2 And The Cys Domain Of E1 In Ubiquitin-Like Modifications Length = 217 | Back alignment and structure |
| >pdb|1JWB|B Chain B, Structure Of The Covalent Acyl-Adenylate Form Of The Moeb-Moad Protein Complex Length = 249 | Back alignment and structure |
| >pdb|1ZFN|A Chain A, Structural Analysis Of Escherichia Coli Thif Length = 253 | Back alignment and structure |
| >pdb|1ZUD|1 Chain 1, Structure Of This-Thif Protein Complex Length = 251 | Back alignment and structure |
| >pdb|3H5A|A Chain A, Crystal Structure Of E. Coli Mccb Length = 358 | Back alignment and structure |
| >pdb|3H5N|A Chain A, Crystal Structure Of E. Coli Mccb + Atp Length = 353 | Back alignment and structure |
| >pdb|3GUC|A Chain A, Human Ubiquitin-Activating Enzyme 5 In Complex With Amppnp Length = 292 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A Length = 640 | Back alignment and structure |
|---|
Score = 477 bits (1229), Expect = e-162
Identities = 210/625 (33%), Positives = 332/625 (53%), Gaps = 58/625 (9%)
Query: 12 IDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVKDPKFNVEFF 71
ID+DTI+VSNLNRQFLF++ HVG+SKA+VA+++VL+F P+ +I A+H ++ +P +NVEFF
Sbjct: 47 IDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDSIMNPDYNVEFF 106
Query: 72 KQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPA 131
+QF +V+N LDN AR HVNR+CLAADVPL+ESGT G+LGQVT KG TECYEC PKP
Sbjct: 107 RQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKGVTECYECHPKPT 166
Query: 132 PKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQENDLNVRSSDASSSAHAEDVFVR 191
+T+P TI +TPS+ +HCIVWAK LF +LFG+++ + +++ +D ++ + R
Sbjct: 167 QRTFPGATIRNTPSEPIHCIVWAKY-LFNQLFGEEDADQEVSPDRADPEAAWEPTEAEAR 225
Query: 192 RKD----------------EDIDQYGRRIYDHVFGYNIEVASSNEETWKNRNRPKPIYSA 235
+ + +++ +F +I + ++ W+ R P P+ A
Sbjct: 226 ARASNEDGDIKRISTKEWAKSTGYDPVKLFTKLFKDDIRYLLTMDKLWRKRKPPVPLDWA 285
Query: 236 DVMPENLTEQNGNVAKNCVVDTSSVSAMASLGLKNPQDTWTLLESSRIFLEALKLF--FA 293
+V + + S LGLK+ Q + +R+F ++++
Sbjct: 286 EVQSQGEE-----------TNASDQQNEPQLGLKD-QQVLDVKSYARLFSKSIETLRVHL 333
Query: 294 KREKEIGNLSFDKDDQLAVEFVTAAANIRAASFGISLHSLFEAKGIAGNIVHAVATTNAI 353
+ + L +DKDD A++FVT+AAN+R F +++ S F+ K +AGNI+ A+ATTNA+
Sbjct: 334 AEKGDGAELIWDKDDPSAMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAV 393
Query: 354 IAGLIVIEAIKVLLKDTDKYRMTYCLEHIT-KKMLLMPVEPYEPNKSCYVCSETP-LSLE 411
IAGLIV+E +K+L D+ R + + +K LL+P PN +CYVC+ P +++
Sbjct: 394 IAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNPNCYVCASKPEVTVR 453
Query: 412 INTSRSKLRDFVEKIVKAKLGINFPLIMHGSNLLYEVGDDLDEVEVANYAANLEKVLSQL 471
+N + + +KIVK K + P + + G L E AN K LS+
Sbjct: 454 LNVHKVTVLTLQDKIVKEKFAMVAPDVQ----IEDGKGTILISSEEGETEANNHKKLSEF 509
Query: 472 PSPVTNGTMLTVEDLQQELTCNINIKHREEFDEEKEPDGMLLSGWTQAPPAKDDKQSMND 531
+ NG+ L +D Q+ T INI H E+ ++ E + + + P +D
Sbjct: 510 --GIRNGSRLQADDFLQDYTLLINILHSEDLGKDVEFEVVGDAPEKVGPKQAEDAAKSIT 567
Query: 532 KQSIGNGGDSSNALQTEPADAVKDGEMEEIS-------EPSGKKRKLSEGSKASILDATD 584
S S++ Q + + D + E+ S E +KRKL E
Sbjct: 568 NGSDDGAQPSTSTAQEQDDVLIVDSDEEDSSNNADVSEEERSRKRKLDE----------K 617
Query: 585 GTRNHKEVEKLDDDDDDDDDVVMFD 609
+ K + ++ DDV+ D
Sbjct: 618 ENLSAKRSRI--EQKEELDDVIALD 640
|
| >3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae} Length = 1015 | Back alignment and structure |
|---|
| >3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae} Length = 1015 | Back alignment and structure |
|---|
| >2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1 Length = 805 | Back alignment and structure |
|---|
| >2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1 Length = 805 | Back alignment and structure |
|---|
| >1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B* Length = 434 | Back alignment and structure |
|---|
| >1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B* Length = 434 | Back alignment and structure |
|---|
| >1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A* Length = 531 | Back alignment and structure |
|---|
| >1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus} Length = 276 | Back alignment and structure |
|---|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* Length = 292 | Back alignment and structure |
|---|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* Length = 249 | Back alignment and structure |
|---|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A Length = 251 | Back alignment and structure |
|---|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* Length = 346 | Back alignment and structure |
|---|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* Length = 340 | Back alignment and structure |
|---|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A Length = 598 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 622 | |||
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 100.0 | |
| 3cmm_A | 1015 | Ubiquitin-activating enzyme E1 1; UBA1, protein tu | 100.0 | |
| 1tt5_B | 434 | Ubiquitin-activating enzyme E1C isoform 1; cell cy | 100.0 | |
| 2nvu_B | 805 | Maltose binding protein/NEDD8-activating enzyme E1 | 100.0 | |
| 1z7l_A | 276 | Ubiquitin-activating enzyme E1 1; SCCH, second cat | 100.0 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 99.97 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 99.95 | |
| 1tt5_A | 531 | APPBP1, amyloid protein-binding protein 1; cell cy | 99.94 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 99.93 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 99.93 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 99.92 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 99.91 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 99.91 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 99.9 | |
| 3cmm_A | 1015 | Ubiquitin-activating enzyme E1 1; UBA1, protein tu | 99.88 | |
| 1y8x_B | 98 | Ubiquitin-activating enzyme E1C; ubiquitin-conjuga | 99.01 | |
| 3onh_A | 127 | Ubiquitin-activating enzyme E1-like; ligase, SUMO | 98.98 | |
| 1z7l_A | 276 | Ubiquitin-activating enzyme E1 1; SCCH, second cat | 98.45 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 92.46 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 92.19 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 91.44 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 87.83 |
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-110 Score=941.46 Aligned_cols=496 Identities=38% Similarity=0.647 Sum_probs=420.3
Q ss_pred CcccCccEEEEEeCCccCccccccccCCCccccCchHHHHHHHHHHhhCCCCeEEEEeccCCCCCchhhhhccCCEEEEe
Q 006996 1 MVSERQLEAIKIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVKDPKFNVEFFKQFNVVLNG 80 (622)
Q Consensus 1 lv~~GvG~I~IvD~DtIe~SNLnRQfLf~~~dIGk~KaevAa~~l~~~NP~v~I~a~~~~i~~~~~~~~f~~~~DlVi~a 80 (622)
|+++|||+|+|+|+|+|+.|||||||||+.+|||++||++|+++++++||+++|+++..++++..+..+|+.+||+||+|
T Consensus 36 La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~~~i~~~~~~~~~~~~~DlVvda 115 (640)
T 1y8q_B 36 LVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDSIMNPDYNVEFFRQFILVMNA 115 (640)
T ss_dssp HHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEESCTTSTTSCHHHHTTCSEEEEC
T ss_pred HHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEecccchhhhhHhhhcCCCEEEEC
Confidence 46789999999999999999999999999999999999999999999999999999999998777778999999999999
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeccccccceEEEEeCCCCccccccCCCCCCCCCcccccCCCCCceeeehhhhHHHHH
Q 006996 81 LDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFA 160 (622)
Q Consensus 81 lDn~~aR~~vn~~c~~~~iPlI~sGt~G~~G~v~vi~p~~t~Cy~C~~~~~~~~~P~CTi~~~P~~~~hcI~wa~~~~f~ 160 (622)
+||+.+|++||++|+.+++|||++|+.|+.|+++++.|+.|+||+|.+.|+++++|+||++++|+.++|||+||++ +|+
T Consensus 116 ~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p~~t~Cy~C~~~p~~~~~p~Cti~~~p~~~~hci~~a~~-~f~ 194 (640)
T 1y8q_B 116 LDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKGVTECYECHPKPTQRTFPGATIRNTPSEPIHCIVWAKY-LFN 194 (640)
T ss_dssp CSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTTTSCCTTSSCCCCCCCCCTTTTTSCCCSHHHHHHHHHH-HHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECCCCCCCcccCCCCCCcccceeeecCCCCchHHHHHHHHH-HHH
Confidence 9999999999999999999999999999999999999999999999998888999999999999999999999998 899
Q ss_pred HHhCCCCcccccc----cCCCc-cc-----------chhhHHhhhhcCChhhHHHHHH-HhhhccccccHHHHhcCCccc
Q 006996 161 KLFGDKNQENDLN----VRSSD-AS-----------SSAHAEDVFVRRKDEDIDQYGR-RIYDHVFGYNIEVASSNEETW 223 (622)
Q Consensus 161 ~lF~~~~~~~dl~----~~~~~-~~-----------~~~~~~~~~~~~~~~~~~~~a~-~lf~~~F~~~I~~Ll~~~~~W 223 (622)
.|||+....+++. ..... .. .++.+... ..+.|.+|+.||+ .+|+++|+++|++||+|++||
T Consensus 195 ~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~f~k~F~~~I~~Ll~~~~fW 273 (640)
T 1y8q_B 195 QLFGEEDADQEVSPDRADPEAAWEPTEAEARARASNEDGDIKRI-STKEWAKSTGYDPVKLFTKLFKDDIRYLLTMDKLW 273 (640)
T ss_dssp HHHSCCCGGGCCSCCTTCTTSCCC----------------------CHHHHHHTTSCHHHHHHHHHTHHHHHHTTCGGGC
T ss_pred HHhCCcchhhhhcccccchhhhhhhhhhhhhhhhhhhhhHHHHH-hhhhHHHhHhHHHHHHHHHHHhhHHHHHHhCcccc
Confidence 9999865333221 11100 00 00011111 1224667777876 499999999999999999999
Q ss_pred CCCCCCCcccCCCCCCcchhhhcccccccccccchhhhHHhhcCCCCCCCccccccchHHHHHHHHHHHHhhhh--ccCC
Q 006996 224 KNRNRPKPIYSADVMPENLTEQNGNVAKNCVVDTSSVSAMASLGLKNPQDTWTLLESSRIFLEALKLFFAKREK--EIGN 301 (622)
Q Consensus 224 ~~rr~P~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~e~~~~f~~~~~~~~~~~~~--~~~~ 301 (622)
++||+|+||.|+.+.+.++.. .....+.+..+|+++ +.+|++.++.++|.++++++.++... .+.+
T Consensus 274 ~~kr~P~pl~fd~~~~~~~~~-----------~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 341 (640)
T 1y8q_B 274 RKRKPPVPLDWAEVQSQGEET-----------NASDQQNEPQLGLKD-QQVLDVKSYARLFSKSIETLRVHLAEKGDGAE 341 (640)
T ss_dssp SSSCCCCCCCHHHHHHC-------------------------CCCGG-GSCCCHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred cCCCCCCCcccCccccccccc-----------cccccccccccCCCh-hhhcChhhhhhhHHHHHHHHHHHhhhcccCCC
Confidence 999999999998533221110 000111223445544 77999999999999999999877532 4789
Q ss_pred ccCCCCcHhHHHHHHHHHHHHHHHcCCCCCCHHHHHhhhcccccchhhhHHHHHHHHHHHHHHHHhcCcccceeeEeecc
Q 006996 302 LSFDKDDQLAVEFVTAAANIRAASFGISLHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVLLKDTDKYRMTYCLEH 381 (622)
Q Consensus 302 l~FDKDD~~h~dFV~AaaNLRA~~f~I~~~s~~~vK~iAGnIIPAIATTnAiVAGl~vlE~~Kvl~~~~~~~r~~f~~~~ 381 (622)
++|||||+.||+||+|||||||++|+||++|+|++|+|||||||||||||||||||+|+|+||++++..+.|||+|++++
T Consensus 342 ~~FdKDDd~h~dFV~aaaNlRA~~y~I~~~~~~~~K~iAG~IIPAIATTnAiVaGl~~lE~~Kvl~~~~~~~kn~f~n~a 421 (640)
T 1y8q_B 342 LIWDKDDPSAMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSGKIDQCRTIFLNKQ 421 (640)
T ss_dssp CCCCTTCHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHTTCGGGCEEEEECSS
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCcccchhhHHHHHHHHHHHHHHHHHhccHHhhhhhheeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999899999999998
Q ss_pred -cccceeecccCCCCCCCCcccCC-cccEEEEEcCCCCCHHHHHHHHHHHhcCCCCcceee---cCcEEEeeCCCccHHH
Q 006996 382 -ITKKMLLMPVEPYEPNKSCYVCS-ETPLSLEINTSRSKLRDFVEKIVKAKLGINFPLIMH---GSNLLYEVGDDLDEVE 456 (622)
Q Consensus 382 -~~~~~~~~~~~~~~pn~~C~vC~-~~~~~l~i~~~~~TL~~li~~ilk~~~~~~~~~I~~---g~~~LY~~~~~l~~~~ 456 (622)
+.+++++.++.|.+|+|+|++|+ .++++++++.+++||++|++++++++|||+.++|++ |+++||..+++
T Consensus 422 ~~~~~~~~~~~~p~~p~~~c~vc~~~~~~~~~~~~~~~TL~~li~~~~~~~~~l~~~~is~~~~~~~~ly~~~~~----- 496 (640)
T 1y8q_B 422 PNPRKKLLVPCALDPPNPNCYVCASKPEVTVRLNVHKVTVLTLQDKIVKEKFAMVAPDVQIEDGKGTILISSEEG----- 496 (640)
T ss_dssp CCTTSEEEEEEECCCCCTTCTTTSSSCEEEEEECTTTCBHHHHHHCCCCCCTCCSSCEEEESSSSCCEEECSSSS-----
T ss_pred cCCCCcEEeecccCCCCCCCcccCCccEEEEEEeCCCCcHHHHHHHHHHHhhCCCCceEEEEcCCCcEEEeccch-----
Confidence 55778999999999999999995 668899999889999999999778999999999999 88999987653
Q ss_pred HHHHhhhhhcccccCCCCCCCCcEEEEeeCCCCeEEEEEEEeccCCCCCCCCCceEecCCCCCCCC
Q 006996 457 VANYAANLEKVLSQLPSPVTNGTMLTVEDLQQELTCNINIKHREEFDEEKEPDGMLLSGWTQAPPA 522 (622)
Q Consensus 457 ~~~~~~nl~k~L~el~~~i~~g~~l~v~D~~~~~~~~l~i~~~~~~~~~~~~~~~~l~g~~~~~~~ 522 (622)
.+++||.|+|++| ++++|++++|+|+.+.+.++|.+.|+++. +++.+|+|+|+.+....
T Consensus 497 --~~~~~l~~~l~el--~v~~~~~~~v~d~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~ 555 (640)
T 1y8q_B 497 --ETEANNHKKLSEF--GIRNGSRLQADDFLQDYTLLINILHSEDL---GKDVEFEVVGDAPEKVG 555 (640)
T ss_dssp --SSTTGGGSBGGGG--TCCTTCEEEEEETTTTEEEEEEEEECSCC---CTTCCEEETTCC-----
T ss_pred --hhHHhhhCcHHHh--CccCCcEEEecCCCccEEEEEEEEecCcc---cCCCCeEEecCCccccC
Confidence 2568999999999 89999999999999999999999998743 34567999998776653
|
| >3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B* | Back alignment and structure |
|---|
| >2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1 | Back alignment and structure |
|---|
| >1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus} | Back alignment and structure |
|---|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
| >1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A* | Back alignment and structure |
|---|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
| >3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1y8x_B Ubiquitin-activating enzyme E1C; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: c.111.1.2 PDB: 3fn1_A | Back alignment and structure |
|---|
| >3onh_A Ubiquitin-activating enzyme E1-like; ligase, SUMO conjugation, UBC9; 1.60A {Saccharomyces cerevisiae} PDB: 3ong_A | Back alignment and structure |
|---|
| >1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus} | Back alignment and structure |
|---|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 622 | ||||
| d1yovb1 | 426 | c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [T | 2e-39 | |
| d1yovb1 | 426 | c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [T | 2e-32 | |
| d1yova1 | 529 | c.111.1.2 (A:6-534) Amyloid beta precursor protein | 1e-36 |
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} Length = 426 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (373), Expect = 2e-39
Identities = 62/162 (38%), Positives = 94/162 (58%), Gaps = 16/162 (9%)
Query: 12 IDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVKDPKFNVEFF 71
IDMDTI+VSNLNRQFLFR +G+ KA+VA + + P ++ H ++D FN F+
Sbjct: 67 IDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQD--FNDTFY 124
Query: 72 KQFNVVLNGLDNLDARRHVNRLCL------------AADVPLVESGTTGFLGQVTVHVKG 119
+QF++++ GLD++ ARR +N + + ++ VPL++ GT GF G V + G
Sbjct: 125 RQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPG 184
Query: 120 KTECYECQPK--PAPKTYPVCTITSTPSKFVHCIVWAKDLLF 159
T C EC + P +P+CTI S P HCI + + L +
Sbjct: 185 MTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQW 226
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} Length = 426 | Back information, alignment and structure |
|---|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 529 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 622 | |||
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 99.93 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 99.92 | |
| d1y8xb1 | 92 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 98.81 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 93.06 |
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-72 Score=611.89 Aligned_cols=349 Identities=30% Similarity=0.491 Sum_probs=275.2
Q ss_pred CcccCccEEEEEeCCccCccccccccCCCccccCchHHHHHHHHHHhhCCCCeEEEEeccCCCCCchhhhhccCCEEEEe
Q 006996 1 MVSERQLEAIKIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPQMSITAHHANVKDPKFNVEFFKQFNVVLNG 80 (622)
Q Consensus 1 lv~~GvG~I~IvD~DtIe~SNLnRQfLf~~~dIGk~KaevAa~~l~~~NP~v~I~a~~~~i~~~~~~~~f~~~~DlVi~a 80 (622)
|+++|+|+|+|+|+|+|+.|||||||||+.+|||++||++|+++++++||+++|+++..++.+ ++.+|+++||+||+|
T Consensus 56 L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~~--~~~~~~~~~DlVi~~ 133 (426)
T d1yovb1 56 LALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQD--FNDTFYRQFHIIVCG 133 (426)
T ss_dssp HHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCGGG--BCHHHHTTCSEEEEC
T ss_pred HHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeeccccc--hHHHHHHhcchheec
Confidence 468899999999999999999999999999999999999999999999999999999999965 457899999999999
Q ss_pred cCCHHHHHHHHHHHH------------HcCCCEEEeccccccceEEEEeCCCCccccccCC--CCCCCCCcccccCCCCC
Q 006996 81 LDNLDARRHVNRLCL------------AADVPLVESGTTGFLGQVTVHVKGKTECYECQPK--PAPKTYPVCTITSTPSK 146 (622)
Q Consensus 81 lDn~~aR~~vn~~c~------------~~~iPlI~sGt~G~~G~v~vi~p~~t~Cy~C~~~--~~~~~~P~CTi~~~P~~ 146 (622)
+||+.+|+++|++|+ ..++|||++|+.|+.||++++.|+.|+||+|.++ |+++++|.|||+++|+.
T Consensus 134 ~Dn~~aR~~in~~c~~l~k~~~~~~~~~~~iPlI~gg~~G~~G~~~vi~p~~t~Cy~C~~~~~p~~~~~p~CTi~~~P~~ 213 (426)
T d1yovb1 134 LDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRL 213 (426)
T ss_dssp CSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEEEEETTEEEEEEECTTTSCCGGGGGGGSCCCCCCCHHHHHHCCCS
T ss_pred cCcHHHHHHHHHHHHHhhcccccccccccCCceEEeEEeeeEEEEEEECCCCCCCcCcCCCCCCCCCCCCcccccCCCCC
Confidence 999999999999997 4578999999999999999999999999999875 56789999999999999
Q ss_pred ceeeehhhhHHHHHHHhCCCCcccccccCCCcccchhhHHhhhhcCChhhHHHHHHHhhhccccccHHHHhcCCcccCCC
Q 006996 147 FVHCIVWAKDLLFAKLFGDKNQENDLNVRSSDASSSAHAEDVFVRRKDEDIDQYGRRIYDHVFGYNIEVASSNEETWKNR 226 (622)
Q Consensus 147 ~~hcI~wa~~~~f~~lF~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~lf~~~F~~~I~~Ll~~~~~W~~r 226 (622)
|+|||+||+.+.|...+. |
T Consensus 214 ~~hci~~ak~l~~~~~~~--------------------------------------------~----------------- 232 (426)
T d1yovb1 214 PEHCIEYVRMLQWPKEQP--------------------------------------------F----------------- 232 (426)
T ss_dssp HHHHHHHHHHTHHHHSCT--------------------------------------------T-----------------
T ss_pred chheeehhhhhccccccc--------------------------------------------c-----------------
Confidence 999999999843322110 0
Q ss_pred CCCCcccCCCCCCcchhhhcccccccccccchhhhHHhhcCCCCCCCccccccchHHHHHHHHHHHHhhhhccCCccCCC
Q 006996 227 NRPKPIYSADVMPENLTEQNGNVAKNCVVDTSSVSAMASLGLKNPQDTWTLLESSRIFLEALKLFFAKREKEIGNLSFDK 306 (622)
Q Consensus 227 r~P~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~e~~~~f~~~~~~~~~~~~~~~~~l~FDK 306 (622)
.....||+
T Consensus 233 ------------------------------------------------------------------------~~~~~~d~ 240 (426)
T d1yovb1 233 ------------------------------------------------------------------------GEGVPLDG 240 (426)
T ss_dssp ------------------------------------------------------------------------STTCCCCT
T ss_pred ------------------------------------------------------------------------cccCCCCC
Confidence 01126999
Q ss_pred CcHhHHHHHHHHHHHHHHHcCCCCCCHHHHHhhhcccccchhhhHHHHHHHHHHHHHHHHhcCcccceeeEeecccccce
Q 006996 307 DDQLAVEFVTAAANIRAASFGISLHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVLLKDTDKYRMTYCLEHITKKM 386 (622)
Q Consensus 307 DD~~h~dFV~AaaNLRA~~f~I~~~s~~~vK~iAGnIIPAIATTnAiVAGl~vlE~~Kvl~~~~~~~r~~f~~~~~~~~~ 386 (622)
||+.||+||+++||+||.+|+|+.++++.+|+||||||||||||||||||++++|++|++++.....++.|+..... +
T Consensus 241 dd~~~i~~i~~~a~~ra~~~~I~~~~~~~~k~ia~nIIPaiatTnAIVagl~~~E~iK~lt~~~~p~~n~~~~~~~~-~- 318 (426)
T d1yovb1 241 DDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVD-G- 318 (426)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHCSSCCCCSEEEEECSB-S-
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCccHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhcCCccccceEEEecCC-C-
Confidence 99999999999999999999999999999999999999999999999999999999999999865555544433321 1
Q ss_pred eecccCCCCCCCCcccCCcccEEEEEcCCCCCHHHHHHHHHHHh--cCCCCccee----ecCcEEEeeCCCccHHHHHHH
Q 006996 387 LLMPVEPYEPNKSCYVCSETPLSLEINTSRSKLRDFVEKIVKAK--LGINFPLIM----HGSNLLYEVGDDLDEVEVANY 460 (622)
Q Consensus 387 ~~~~~~~~~pn~~C~vC~~~~~~l~i~~~~~TL~~li~~ilk~~--~~~~~~~I~----~g~~~LY~~~~~l~~~~~~~~ 460 (622)
......+.+|+|+|++|+.....++++ .++||++|++.+ +++ +++..|++. .++++||....+ +..+.+
T Consensus 319 ~~~~~~~~~k~~~C~vC~~~~~~~~~~-~~~tL~~li~~~-~~~~~l~~~~p~~~~~~~~~~~~Ly~~~~~---~le~~~ 393 (426)
T d1yovb1 319 LYTYTFEAERKENCPACSQLPQNIQFS-PSAKLQEVLDYL-TNSASLQMKSPAITATLEGKNRTLYLQSVT---SIEERT 393 (426)
T ss_dssp CEEEEECCCCCTTCTTTCSSCBCCC-------CTTHHHHT-TTCSSSCCSSCCEECC-----CEECCCC-------CGGG
T ss_pred ceEeeeeccCCCCCCeeCCceEEEEEC-CCCCHHHHHHHH-HHhhCcCccCCcceeeecCCCcEEEecCCc---hhhHHh
Confidence 233444567999999999877777777 579999999995 554 556667653 357799976543 122458
Q ss_pred hhhhhcccccCCCCCCCCcEEEEeeCCCCeEEE
Q 006996 461 AANLEKVLSQLPSPVTNGTMLTVEDLQQELTCN 493 (622)
Q Consensus 461 ~~nl~k~L~el~~~i~~g~~l~v~D~~~~~~~~ 493 (622)
++||+|+|+|| |+.+|++|+|+|...+.++.
T Consensus 394 ~~nl~k~L~eL--~~~~g~~l~v~D~~~~~~~~ 424 (426)
T d1yovb1 394 RPNLSKTLKEL--GLVDGQELAVADVTTPQTVL 424 (426)
T ss_dssp STTC----------------CBCCBTTBSSCCB
T ss_pred hhhhcCCHHHh--CCCCCCEEEEECCCCCccee
Confidence 89999999999 99999999999998765543
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1y8xb1 c.111.1.2 (B:349-440) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|