Citrus Sinensis ID: 006998
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 622 | ||||||
| 225432848 | 574 | PREDICTED: uncharacterized protein LOC10 | 0.916 | 0.993 | 0.633 | 0.0 | |
| 84468392 | 563 | hypothetical protein [Trifolium pratense | 0.836 | 0.923 | 0.642 | 0.0 | |
| 449465699 | 579 | PREDICTED: uncharacterized protein LOC10 | 0.921 | 0.989 | 0.607 | 0.0 | |
| 255552009 | 566 | conserved hypothetical protein [Ricinus | 0.892 | 0.980 | 0.594 | 0.0 | |
| 297816898 | 580 | hypothetical protein ARALYDRAFT_486012 [ | 0.855 | 0.917 | 0.609 | 0.0 | |
| 15228186 | 578 | uncharacterized protein [Arabidopsis tha | 0.850 | 0.915 | 0.609 | 0.0 | |
| 22655111 | 578 | putative protein [Arabidopsis thaliana] | 0.850 | 0.915 | 0.609 | 0.0 | |
| 224102135 | 536 | predicted protein [Populus trichocarpa] | 0.852 | 0.988 | 0.651 | 0.0 | |
| 297737133 | 414 | unnamed protein product [Vitis vinifera] | 0.654 | 0.983 | 0.731 | 1e-179 | |
| 356500589 | 575 | PREDICTED: uncharacterized protein LOC10 | 0.861 | 0.932 | 0.553 | 1e-169 |
| >gi|225432848|ref|XP_002279944.1| PREDICTED: uncharacterized protein LOC100256346 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/608 (63%), Positives = 452/608 (74%), Gaps = 38/608 (6%)
Query: 1 MASQLSHYPRATGHRANPPLIFTTRRTTPQQINFWSRRTGAKVG--VSNSEGGGSYLDMW 58
MAS L RAT A P + R + RR+G + + S+GG SYLDMW
Sbjct: 1 MASHLGASLRATARSAVP---VSHRHKHRVAVTVLVRRSGGRGASRIRVSDGGDSYLDMW 57
Query: 59 QKAVDRDRKEIEFQKIAGSLAESGDVDGNEGGGGRDLTEQLEKKSEEFSKILDVSKEERD 118
+KAVD++RK +EFQ+IAG+ G+ DG + E LE+KS EF KIL+VSKEERD
Sbjct: 58 KKAVDQERKGMEFQRIAGN--SGGEDDG-------ESAEALERKSGEFMKILEVSKEERD 108
Query: 119 RIQRLQVIDRAAAAIAAARAILEEKNGSVVKNGESS-GTAEVSRFVKKNSESSGAAEISP 177
++QR+QVIDRAAAAIAAARAIL+E K+GE G + V E SG+ +
Sbjct: 109 KVQRIQVIDRAAAAIAAARAILQES-----KSGEQELGYSRV--------EGSGSETMHD 155
Query: 178 FVKNSESNGTAEVPERDSSGALSAGIFVPRSGTPGNRTPAPGPDFWSWSPPEDDDRDMRD 237
+NS VP G + +FVP+S T N TP GPDFWSW+PP D + D
Sbjct: 156 VFQNSV---IFIVP-----GTQNGILFVPQSRTSVNSTP--GPDFWSWTPPMDSEGKSDD 205
Query: 238 VRDLQMAEKSSVYPTPVNPVVEKARSVDILPIPFESKLSEPKPDPLLPPFQSLLGVEKEE 297
+LQ A SS Y TP ++EK +SVD L IPFES+ SE +P LPP QSL V +
Sbjct: 206 AGNLQTARTSSPYLTPAESLMEKEQSVDFLSIPFESRFSESSHNPPLPPLQSLTEVGTVD 265
Query: 298 VSETNLETPSLEEERDLGALFSAHAAEAAHALDKVDELATRGINPDGSRWWKETGIEQRP 357
VS ++LE PSL++E +LG LF HAAEA HALD+VD + G++PDGSRWW+ETGIEQRP
Sbjct: 266 VSSSSLEMPSLKKEDELGVLFLGHAAEAVHALDEVDGALSHGVSPDGSRWWRETGIEQRP 325
Query: 358 DGVVCRWTMTRGVSADEALEWQEKFWEAADELGHKELGSEKSGRDATGNVWREFWTESMW 417
DGVVCRWT+ RGVSAD +EW+EKFWEAAD+ +KELGSEKSGRDATGNVWRE+W ESMW
Sbjct: 326 DGVVCRWTLIRGVSADHVVEWEEKFWEAADKFQYKELGSEKSGRDATGNVWREYWKESMW 385
Query: 418 QNQGLVHLEKTADKWGKNGNGDEWQEKWWEHYDASGKAEKWAHKWCSIDPNTQLDAGHAH 477
Q+ GL+H+EKTADKWGKNG GDEW EKWWE YDASGKA+KWAHKWCSIDPNTQL+AGHAH
Sbjct: 386 QDCGLMHMEKTADKWGKNGKGDEWHEKWWEQYDASGKADKWAHKWCSIDPNTQLEAGHAH 445
Query: 478 VWHERWGEKYDGHGGSMKYTDKWAERCEGDGWSKWGDKWDENFDPNSHGVKQGETWWAGK 537
VWHERWGE+YDGHGGSMKYTDKWAERCEGD W+KWGDKWDENFDPNSHGVKQGETWW GK
Sbjct: 446 VWHERWGERYDGHGGSMKYTDKWAERCEGDAWTKWGDKWDENFDPNSHGVKQGETWWEGK 505
Query: 538 YGERWNRTWGERHNGSGWVHKYGKSSSGELWDTHEQQETWYERFPHFGFYHCFDNSVQLR 597
+GERWNRTWGE HNGSGWVHKYGKSSSGE WDTHE+Q+TWYERFPH+GFYHCF+NSVQLR
Sbjct: 506 HGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHEEQDTWYERFPHYGFYHCFENSVQLR 565
Query: 598 EVRKPSEF 605
EV+ P +
Sbjct: 566 EVQTPPQL 573
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|84468392|dbj|BAE71279.1| hypothetical protein [Trifolium pratense] | Back alignment and taxonomy information |
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| >gi|449465699|ref|XP_004150565.1| PREDICTED: uncharacterized protein LOC101218256 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255552009|ref|XP_002517049.1| conserved hypothetical protein [Ricinus communis] gi|223543684|gb|EEF45212.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297816898|ref|XP_002876332.1| hypothetical protein ARALYDRAFT_486012 [Arabidopsis lyrata subsp. lyrata] gi|297322170|gb|EFH52591.1| hypothetical protein ARALYDRAFT_486012 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|15228186|ref|NP_191135.1| uncharacterized protein [Arabidopsis thaliana] gi|30694316|ref|NP_850708.1| uncharacterized protein [Arabidopsis thaliana] gi|334186001|ref|NP_001190098.1| uncharacterized protein [Arabidopsis thaliana] gi|58652076|gb|AAW80863.1| At3g55760 [Arabidopsis thaliana] gi|332645910|gb|AEE79431.1| uncharacterized protein [Arabidopsis thaliana] gi|332645911|gb|AEE79432.1| uncharacterized protein [Arabidopsis thaliana] gi|332645912|gb|AEE79433.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|22655111|gb|AAM98146.1| putative protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|224102135|ref|XP_002312560.1| predicted protein [Populus trichocarpa] gi|222852380|gb|EEE89927.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297737133|emb|CBI26334.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356500589|ref|XP_003519114.1| PREDICTED: uncharacterized protein LOC100810326 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 622 | ||||||
| TAIR|locus:2079001 | 578 | AT3G55760 [Arabidopsis thalian | 0.715 | 0.769 | 0.617 | 1.1e-165 | |
| TAIR|locus:2035898 | 426 | AT1G42430 "AT1G42430" [Arabido | 0.421 | 0.615 | 0.439 | 4.8e-62 | |
| TAIR|locus:2179979 | 1493 | KTF1 "AT5G04290" [Arabidopsis | 0.371 | 0.154 | 0.252 | 0.00031 |
| TAIR|locus:2079001 AT3G55760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1612 (572.5 bits), Expect = 1.1e-165, P = 1.1e-165
Identities = 279/452 (61%), Positives = 335/452 (74%)
Query: 153 SSGTAEVSRFVKKNSESSGAAEISPFVKNSESNGTAEVPERDSSGALSAGIFVPRSGTPG 212
++ +R + ++ S E P N+ ++ E P+ G S ++VPRS T G
Sbjct: 132 AAAAISAARAILASNNSGDGKEGFPNEDNTVTSEVTETPKNAKLGMWSRTVYVPRSETSG 191
Query: 213 NRTPAPGPDFWSWSPPEXXXXXXXXXXXLQMAEKSSVYPTPVNPVVEKARSVDILPIPFE 272
TP GPDFWSW+PP+ LQ EK + +PT NPV+EK +S D L IP+E
Sbjct: 192 TETP--GPDFWSWTPPQGSEISSVD---LQAVEKPAEFPTLPNPVLEKDKSADSLSIPYE 246
Query: 273 SKLSEPKPDPLLPPFQSLLGVEKEEVSETNLETPSLEEERDLGALFSXXXXXXXXXLDKV 332
S LS + +PPF+SL+ V KE +ET + +L E DL + S LD +
Sbjct: 247 SMLSSERHSFTIPPFESLIEVRKE--AETKPSSETLSTEHDLDLISSANAEEVARVLDSL 304
Query: 333 DELATRGINPDGSRWWKETGIEQRPDGVVCRWTMTRGVSADEALEWQEKFWEAADELGHK 392
DE +T G++ DG +WWK+TG+E+RPDGVVCRWTM RGV+AD +EWQ+K+WEA+D+ G K
Sbjct: 305 DESSTHGVSEDGLKWWKQTGVEKRPDGVVCRWTMIRGVTADGVVEWQDKYWEASDDFGFK 364
Query: 393 ELGSEKSGRDATGNVWREFWTESMWQNQGLVHLEKTADKWGKNGNGDEWQEKWWEHYDAS 452
ELGSEKSGRDATGNVWREFW ESM Q G+VH+EKTADKWGK+G GDEWQEKWWEHYDA+
Sbjct: 365 ELGSEKSGRDATGNVWREFWRESMSQENGVVHMEKTADKWGKSGQGDEWQEKWWEHYDAT 424
Query: 453 GKAEKWAHKWCSIDPNTQLDAGHAHVWHERWGEKYDGHGGSMKYTDKWAERCEGDGWSKW 512
GK+EKWAHKWCSID NT LDAGHAHVWHERWGEKYDG GGS KYTDKWAER GDGW KW
Sbjct: 425 GKSEKWAHKWCSIDRNTPLDAGHAHVWHERWGEKYDGQGGSTKYTDKWAERWVGDGWDKW 484
Query: 513 GDKWDENFDPNSHGVKQGETWWAGKYGERWNRTWGERHNGSGWVHKYGKSSSGELWDTHE 572
GDKWDENF+P++ GVKQGETWW GK+G+RWNR+WGE HNGSGWVHKYGKSSSGE WDTH
Sbjct: 485 GDKWDENFNPSAQGVKQGETWWEGKHGDRWNRSWGEGHNGSGWVHKYGKSSSGEHWDTHV 544
Query: 573 QQETWYERFPHFGFYHCFDNSVQLREVRKPSE 604
QETWYE+FPHFGF+HCFDNSVQLR V+KPS+
Sbjct: 545 PQETWYEKFPHFGFFHCFDNSVQLRAVKKPSD 576
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| TAIR|locus:2035898 AT1G42430 "AT1G42430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2179979 KTF1 "AT5G04290" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00