Citrus Sinensis ID: 007079


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------62
MASQLSHYPRATGHRANPPLIFTTRRTTPQQINFWSRRTGAKVGVSNSEGGGSYLDMWQKAVDRDRKEIEFQKIAGSLAESGDVDGNEGGGGRDLTEQLEKKSEEFSKILDVSKEERDRIQRLQVIDRAAAAIAAARAILEEKNGSVVKNGESSGTAEVSRFVKKNSESSGAAEISPFVKNSESNGTAEVPERGALSAGIFVPRSGTPGNRTPAPGPDFWSWSPPEDDDRDMRDVRDLQMAEKSSVYPTPVNPVVEKARSVDILPIPFESKLSEPKPDPLLPPFQSLLGVEKEEVSETNLETPSLEEERDLGALFSAHAAEAAHALDKVDELATRGINPDGSRWWKETGIEQRPDGVVCRWTMTRGVSADEALEWQEKFWEAADELGHKELGSEKSGRDATGNVWREFWTESMWQNQGLVHLEKTADKWGKNGNGDEWQEKWWEHYDASGKAEKWAHKWCSIDPNTQLDAGHAHVWHERWGEKYDGHGGSMKYTDKWAERCEGDGWSKWGDKWDENFDPNSHGVKQGETWWAGKYGERWNRTWGERHNGSGWVHKYGKSSSGELWDTHEQQETWYERFPHFGFYHCFDNSVQLREVRKPSEFQEEPFEIQDKRSELQEP
ccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccHHHHHHHHHHHcccccccccccccccccHHHHHHccccccccEEEEEEEEccccccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHccccccHHHHHHHccccccccccccccHHHHHHcccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccEEEcccEEEccccccccHHHHcccccEEccccccccccccccccccccccccc
cccccccccHcccccccccEEEEccccccEEEEEcccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccHHHccccccHHHccccccccccccccEEEcccccccccccccccccHHHHHcHHHHHHHHHHHHHHHHcccccccccccccccEEEEcccccccccEEEEEEEEccccccccEEEEHHHHHHcccccccEcccEEcccccccccHHHHHHHHHHHHcccccHHHHHHHHcccccccHHHHHHHHHcccccccHHHHHHccccccccccccccccEHHHHccccccccccEEEEccHHHHccccccccccccccHHcccccccccccccEEEccccccccccccccccccccEEEEEcccccccccccEccccccccccccccHHHHHcccHHHHcccccccccccccEEEcccHHcccc
masqlshypratghranpplifttrrttpqqinfwsrrtgakvgvsnsegggsyLDMWQKAVDRDRKEIEFQKIAGSLaesgdvdgneggggrdLTEQLEKKSEEFSKILDVSKEERDRIQRLQVIDRAAAAIAAARAILEEkngsvvkngessgtaEVSRFVKknsessgaaeispfvknsesngtaevpergalsagifvprsgtpgnrtpapgpdfwswsppedddrdmrdVRDLQMaekssvyptpvnpvvekarsvdilpipfesklsepkpdpllppfqsllgvekeevsetnletpsleeerDLGALFSAHAAEAAHALDKVDElatrginpdgsrwwketgieqrpdgvvcrwtmtrgvsaDEALEWQEKFWEAADELghkelgseksgrdatgNVWREFWTESMWQNQGLVHLEKTAdkwgkngngdewQEKWWEHYDAsgkaekwahkwcsidpntqldaghahvwherwgekydghggsmkytdkwaercegdgwskwgdkwdenfdpnshgvkqgetwwagkygerwnrtwgerhngsgwvhkygksssgelwdthEQQEtwyerfphfgfyhcfdnsvqlrevrkpsefqeepfEIQDKRSELQEP
masqlshypratghranpplifttrrttpqqinfwsrrtgakvgvsnsegggsyLDMWQKAVDRDRKEIEFQKIagslaesgdvdgneggGGRDLTEQLEKKSEEFskildvskeerdRIQRLQVIDRAAAAIAAARAIleekngsvvkngessgtaevSRFVKknsessgaaeispfvknsesnGTAEVPERGALSAGIFVprsgtpgnrtpapgpdfwswsppeDDDRDMRDVRDLQMaekssvyptpvnpvvekARSVDILPIPfesklsepkpdpLLPPFQSLLGVEKEEVsetnletpsleEERDLGALFSAHAAEAAHALDKVDELatrginpdgsrwwketgieqrpdgvvcrWTMTRGVSADEALEWQEKFWEAADELGhkelgseksgrdaTGNVWREFWTESMWQNQGLVHLEKTADKWGKNGNGDEWQEKWWEHYDASGKAEKWAHKWCSIDPNTQLDAGHAHVWHERWGEKYDGHGGSMKYTDKWAERCEGDGWSKWGDKWDENFDpnshgvkqgetwwAGKYGERWNRTWGERHNGSGWVHKYGKSSSGELWDTHEQQETWYERFPHFGFYHCFDNSVQLREVRkpsefqeepfeiqdkrselqep
MASQLSHYPRATGHRANPPLIFTTRRTTPQQINFWSRRTGAKVGVSNSEGGGSYLDMWQKAVDRDRKEIEFQKIAGSLAESgdvdgneggggrdLTEQLEKKSEEFSKILDVSKEERDRIQRLQVIDraaaaiaaaraiLEEKNGSVVKNGESSGTAEVSRFVKKNSESSGAAEISPFVKNSESNGTAEVPERGALSAGIFVPRSGTPGNRTPAPGPDFWSWSPPEdddrdmrdvrdLQMAEKSSVYPTPVNPVVEKARSVDILPIPFESKLSEPKPDPLLPPFQSLLGVEKEEVSETNLETPSLEEERDLGALFSahaaeaahaLDKVDELATRGINPDGSRWWKETGIEQRPDGVVCRWTMTRGVSADEALEWQEKFWEAADELGHKELGSEKSGRDATGNVWREFWTESMWQNQGLVHLEKTADKWGKNGNGDEWQEKWWEHYDASGKAEKWAHKWCSIDPNTQLDAGHAHVWHERWGEKYDGHGGSMKYTDKWAERCEGDGWSKWGDKWDENFDPNSHGVKQGETWWAGKYGERWNRTWGERHNGSGWVHKYGKSSSGELWDTHEQQETWYERFPHFGFYHCFDNSVQLREVRKPSEFQEEPFEIQDKRSELQEP
*******************LIFTTRRTTPQQINFWSRRTGAKVGV*******SYLDMWQKAV**********************************************************QRLQVIDRAAAAIAAARAIL**************************************************************************************************************************I**************************************************LFSAHAAEAAHALDKVDELATRGINPDGSRWWKETGIEQRPDGVVCRWTMTRGVSADEALEWQEKFWEAADEL**************TGNVWREFWTESMWQNQGLVHLEKTADKWGKNGNGDEWQEKWWEHYDASGKAEKWAHKWCSIDPNTQLDAGHAHVWHERWGEKYDGHGGSMKYTDKWAERCEGDGWSKWGDKWDENFDPNSHGVKQGETWWAGKYGERWNRTWGERHNGSGWVHKYGKSSSGELWDTHEQQETWYERFPHFGFYHCFDNSVQL**************************
****************NPPLIFTTRRTTP*****************************************************************************************************A*********************************************************************************************************************************************************************************************************************************VVCRWTMT*GV*****LEWQEKFWEAADELGHKELGSEKSGRDATGNVWREFWTESMWQNQGLVHLEK************EWQEKWWEHYDASGKAEKW************LDAGHAHVWHERWGEKYDGHGGSMKYTDKWAERCEGDGWSKWGDKWDENFDPNSHGVKQGETWWAGKYGERWNRTWGERHNGSGWVHKYGKSSSGELWDTHEQQETWYERFPHFGFYHCFDNSVQL**************************
********PRATGHRANPPLIFTTRRTTPQQINFWSRRTGAKVGVSNSEGGGSYLDMWQKAVDRDRKEIEFQKIAGSLAESGDVDGNEGGGGRDLTEQLEKKSEEFSKILDVSKEERDRIQRLQVIDRAAAAIAAARAILEEKNGSVVKNGESSGTAEV*************AEISPFVKNSESNGTAEVPERGALSAGIFVPRSGTPGNRTPAPGPDFWSWSPPEDDDRDMRDVRDLQMAEKSSVYPTPVNPVVEKARSVDILPIPFESKLSEPKPDPLLPPFQSLLGVE***************EERDLGALFSAHAAEAAHALDKVDELATRGINPDGSRWWKETGIEQRPDGVVCRWTMTRGVSADEALEWQEKFWEAADELGHKEL********ATGNVWREFWTESMWQNQGLVHLEKTADKWGKNGNGDEWQEKWWEHYDASGKAEKWAHKWCSIDPNTQLDAGHAHVWHERWGEKYDGHGGSMKYTDKWAERCEGDGWSKWGDKWDENFDPNSHGVKQGETWWAGKYGERWNRTWGERHNGSGWVHKYGKSSSGELWDTHEQQETWYERFPHFGFYHCFDNSVQLREVRK*********************
***************ANPPLIFTTRRTTPQQINFWSRRTGAKVGVSNSEGGGSYLDMWQKAVDRDRKEIEFQKIAGSLAE****************EQLEKKSEEFSKILDVSKEERDRIQRLQVIDRAAAAIAAARAILEEK*******************************************************************RTPAPGPDFWSWSPP************************************DILPIPFESKLSEPKPDPLLPPFQSLLGVEK*******************GALFSAHAAEAAHALDKVDE**TRGI*PDGSRWWKETGIEQRPDGVVCRWTMTRGVSADEALEWQEKFWEAADELGHKELGSEKSGRDATGNVWREFWTESMWQNQGLVHLEKTADKWGKNGNGDEWQEKWWEHYDASGKAEKWAHKWCSIDPNTQLDAGHAHVWHERWGEKYDGHGGSMKYTDKWAERCEGDGWSKWGDKWDENFDPNSHGVKQGETWWAGKYGERWNRTWGERHNGSGWVHKYGKSSSGELWDTHEQQETWYERFPHFGFYHCFDNSVQLREVRKPSEFQEEP***QDKR******
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASQLSHYPRATGHRANPPLIFTTRRTTPQQINFWSRRTGAKVGVSNSEGGGSYLDMWQKAVDRDRKEIEFQKIAGSLAESGDVDGNEGGGGRDLTEQLEKKSEEFSKILDVSKEERDRIQRLQVIDRAAAAIAAARAILEEKNGSVVKNGESSGTAEVSRFVKKNSESSGAAEISPFVKNSESNGTAEVPERGALSAGIFVPRSGTPGNRTPAPGPDFWSWSPPEDDDRDMRDVRDLQMAEKSSVYPTPVNPVVEKARSVDILPIPFESKLSEPKPDPLLPPFQSLLGVEKEEVSETNLETPSLEEERDLGALFSAHAAEAAHALDKVDELATRGINPDGSRWWKETGIEQRPDGVVCRWTMTRGVSADEALEWQEKFWEAADELGHKELGSEKSGRDATGNVWREFWTESMWQNQGLVHLEKTADKWGKNGNGDEWQEKWWEHYDASGKAEKWAHKWCSIDPNTQLDAGHAHVWHERWGEKYDGHGGSMKYTDKWAERCEGDGWSKWGDKWDENFDPNSHGVKQGETWWAGKYGERWNRTWGERHNGSGWVHKYGKSSSGELWDTHEQQETWYERFPHFGFYHCFDNSVQLREVRKPSEFQEEPFEIQDKRSELQEP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query619
225432848574 PREDICTED: uncharacterized protein LOC10 0.920 0.993 0.636 0.0
84468392563 hypothetical protein [Trifolium pratense 0.840 0.923 0.645 0.0
449465699579 PREDICTED: uncharacterized protein LOC10 0.925 0.989 0.615 0.0
255552009566 conserved hypothetical protein [Ricinus 0.894 0.978 0.6 0.0
297816898580 hypothetical protein ARALYDRAFT_486012 [ 0.859 0.917 0.614 0.0
15228186578 uncharacterized protein [Arabidopsis tha 0.854 0.915 0.612 0.0
22655111578 putative protein [Arabidopsis thaliana] 0.854 0.915 0.612 0.0
224102135536 predicted protein [Populus trichocarpa] 0.849 0.981 0.653 0.0
297737133414 unnamed protein product [Vitis vinifera] 0.663 0.992 0.726 1e-179
356500589575 PREDICTED: uncharacterized protein LOC10 0.865 0.932 0.555 1e-169
>gi|225432848|ref|XP_002279944.1| PREDICTED: uncharacterized protein LOC100256346 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/605 (63%), Positives = 452/605 (74%), Gaps = 35/605 (5%)

Query: 1   MASQLSHYPRATGHRANPPLIFTTRRTTPQQINFWSRRTGAKVG--VSNSEGGGSYLDMW 58
           MAS L    RAT   A P    + R      +    RR+G +    +  S+GG SYLDMW
Sbjct: 1   MASHLGASLRATARSAVP---VSHRHKHRVAVTVLVRRSGGRGASRIRVSDGGDSYLDMW 57

Query: 59  QKAVDRDRKEIEFQKIAGSLAESGDVDGNEGGGGRDLTEQLEKKSEEFSKILDVSKEERD 118
           +KAVD++RK +EFQ+IAG+    G+ DG       +  E LE+KS EF KIL+VSKEERD
Sbjct: 58  KKAVDQERKGMEFQRIAGN--SGGEDDG-------ESAEALERKSGEFMKILEVSKEERD 108

Query: 119 RIQRLQVIDRAAAAIAAARAILEEKNGSVVKNGESS-GTAEVSRFVKKNSESSGAAEISP 177
           ++QR+QVIDRAAAAIAAARAIL+E      K+GE   G + V        E SG+  +  
Sbjct: 109 KVQRIQVIDRAAAAIAAARAILQES-----KSGEQELGYSRV--------EGSGSETMHD 155

Query: 178 FVKNSESNGTAEVPERGALSAGIFVPRSGTPGNRTPAPGPDFWSWSPPEDDDRDMRDVRD 237
             +NS       VP  G  +  +FVP+S T  N TP  GPDFWSW+PP D +    D  +
Sbjct: 156 VFQNSV---IFIVP--GTQNGILFVPQSRTSVNSTP--GPDFWSWTPPMDSEGKSDDAGN 208

Query: 238 LQMAEKSSVYPTPVNPVVEKARSVDILPIPFESKLSEPKPDPLLPPFQSLLGVEKEEVSE 297
           LQ A  SS Y TP   ++EK +SVD L IPFES+ SE   +P LPP QSL  V   +VS 
Sbjct: 209 LQTARTSSPYLTPAESLMEKEQSVDFLSIPFESRFSESSHNPPLPPLQSLTEVGTVDVSS 268

Query: 298 TNLETPSLEEERDLGALFSAHAAEAAHALDKVDELATRGINPDGSRWWKETGIEQRPDGV 357
           ++LE PSL++E +LG LF  HAAEA HALD+VD   + G++PDGSRWW+ETGIEQRPDGV
Sbjct: 269 SSLEMPSLKKEDELGVLFLGHAAEAVHALDEVDGALSHGVSPDGSRWWRETGIEQRPDGV 328

Query: 358 VCRWTMTRGVSADEALEWQEKFWEAADELGHKELGSEKSGRDATGNVWREFWTESMWQNQ 417
           VCRWT+ RGVSAD  +EW+EKFWEAAD+  +KELGSEKSGRDATGNVWRE+W ESMWQ+ 
Sbjct: 329 VCRWTLIRGVSADHVVEWEEKFWEAADKFQYKELGSEKSGRDATGNVWREYWKESMWQDC 388

Query: 418 GLVHLEKTADKWGKNGNGDEWQEKWWEHYDASGKAEKWAHKWCSIDPNTQLDAGHAHVWH 477
           GL+H+EKTADKWGKNG GDEW EKWWE YDASGKA+KWAHKWCSIDPNTQL+AGHAHVWH
Sbjct: 389 GLMHMEKTADKWGKNGKGDEWHEKWWEQYDASGKADKWAHKWCSIDPNTQLEAGHAHVWH 448

Query: 478 ERWGEKYDGHGGSMKYTDKWAERCEGDGWSKWGDKWDENFDPNSHGVKQGETWWAGKYGE 537
           ERWGE+YDGHGGSMKYTDKWAERCEGD W+KWGDKWDENFDPNSHGVKQGETWW GK+GE
Sbjct: 449 ERWGERYDGHGGSMKYTDKWAERCEGDAWTKWGDKWDENFDPNSHGVKQGETWWEGKHGE 508

Query: 538 RWNRTWGERHNGSGWVHKYGKSSSGELWDTHEQQETWYERFPHFGFYHCFDNSVQLREVR 597
           RWNRTWGE HNGSGWVHKYGKSSSGE WDTHE+Q+TWYERFPH+GFYHCF+NSVQLREV+
Sbjct: 509 RWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHEEQDTWYERFPHYGFYHCFENSVQLREVQ 568

Query: 598 KPSEF 602
            P + 
Sbjct: 569 TPPQL 573




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|84468392|dbj|BAE71279.1| hypothetical protein [Trifolium pratense] Back     alignment and taxonomy information
>gi|449465699|ref|XP_004150565.1| PREDICTED: uncharacterized protein LOC101218256 [Cucumis sativus] Back     alignment and taxonomy information
>gi|255552009|ref|XP_002517049.1| conserved hypothetical protein [Ricinus communis] gi|223543684|gb|EEF45212.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|297816898|ref|XP_002876332.1| hypothetical protein ARALYDRAFT_486012 [Arabidopsis lyrata subsp. lyrata] gi|297322170|gb|EFH52591.1| hypothetical protein ARALYDRAFT_486012 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15228186|ref|NP_191135.1| uncharacterized protein [Arabidopsis thaliana] gi|30694316|ref|NP_850708.1| uncharacterized protein [Arabidopsis thaliana] gi|334186001|ref|NP_001190098.1| uncharacterized protein [Arabidopsis thaliana] gi|58652076|gb|AAW80863.1| At3g55760 [Arabidopsis thaliana] gi|332645910|gb|AEE79431.1| uncharacterized protein [Arabidopsis thaliana] gi|332645911|gb|AEE79432.1| uncharacterized protein [Arabidopsis thaliana] gi|332645912|gb|AEE79433.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|22655111|gb|AAM98146.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224102135|ref|XP_002312560.1| predicted protein [Populus trichocarpa] gi|222852380|gb|EEE89927.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297737133|emb|CBI26334.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356500589|ref|XP_003519114.1| PREDICTED: uncharacterized protein LOC100810326 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query619
TAIR|locus:2079001578 AT3G55760 [Arabidopsis thalian 0.714 0.764 0.617 1e-164
TAIR|locus:2035898426 AT1G42430 "AT1G42430" [Arabido 0.423 0.615 0.439 4.8e-62
TAIR|locus:2179979 1493 KTF1 "AT5G04290" [Arabidopsis 0.373 0.154 0.252 0.00037
TAIR|locus:2079001 AT3G55760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1603 (569.3 bits), Expect = 1.0e-164, P = 1.0e-164
 Identities = 279/452 (61%), Positives = 335/452 (74%)

Query:   153 SSGTAEVSRFVKKNSESSGAAEISPFVKNSESNGTAEVPERGAL---SAGIFVPRSGTPG 209
             ++     +R +  ++ S    E  P   N+ ++   E P+   L   S  ++VPRS T G
Sbjct:   132 AAAAISAARAILASNNSGDGKEGFPNEDNTVTSEVTETPKNAKLGMWSRTVYVPRSETSG 191

Query:   210 NRTPAPGPDFWSWSPPEXXXXXXXXXXXLQMAEKSSVYPTPVNPVVEKARSVDILPIPFE 269
               TP  GPDFWSW+PP+           LQ  EK + +PT  NPV+EK +S D L IP+E
Sbjct:   192 TETP--GPDFWSWTPPQGSEISSVD---LQAVEKPAEFPTLPNPVLEKDKSADSLSIPYE 246

Query:   270 SKLSEPKPDPLLPPFQSLLGVEKEEVSETNLETPSLEEERDLGALFSXXXXXXXXXLDKV 329
             S LS  +    +PPF+SL+ V KE  +ET   + +L  E DL  + S         LD +
Sbjct:   247 SMLSSERHSFTIPPFESLIEVRKE--AETKPSSETLSTEHDLDLISSANAEEVARVLDSL 304

Query:   330 DELATRGINPDGSRWWKETGIEQRPDGVVCRWTMTRGVSADEALEWQEKFWEAADELGHK 389
             DE +T G++ DG +WWK+TG+E+RPDGVVCRWTM RGV+AD  +EWQ+K+WEA+D+ G K
Sbjct:   305 DESSTHGVSEDGLKWWKQTGVEKRPDGVVCRWTMIRGVTADGVVEWQDKYWEASDDFGFK 364

Query:   390 ELGSEKSGRDATGNVWREFWTESMWQNQGLVHLEKTADKWGKNGNGDEWQEKWWEHYDAS 449
             ELGSEKSGRDATGNVWREFW ESM Q  G+VH+EKTADKWGK+G GDEWQEKWWEHYDA+
Sbjct:   365 ELGSEKSGRDATGNVWREFWRESMSQENGVVHMEKTADKWGKSGQGDEWQEKWWEHYDAT 424

Query:   450 GKAEKWAHKWCSIDPNTQLDAGHAHVWHERWGEKYDGHGGSMKYTDKWAERCEGDGWSKW 509
             GK+EKWAHKWCSID NT LDAGHAHVWHERWGEKYDG GGS KYTDKWAER  GDGW KW
Sbjct:   425 GKSEKWAHKWCSIDRNTPLDAGHAHVWHERWGEKYDGQGGSTKYTDKWAERWVGDGWDKW 484

Query:   510 GDKWDENFDPNSHGVKQGETWWAGKYGERWNRTWGERHNGSGWVHKYGKSSSGELWDTHE 569
             GDKWDENF+P++ GVKQGETWW GK+G+RWNR+WGE HNGSGWVHKYGKSSSGE WDTH 
Sbjct:   485 GDKWDENFNPSAQGVKQGETWWEGKHGDRWNRSWGEGHNGSGWVHKYGKSSSGEHWDTHV 544

Query:   570 QQETWYERFPHFGFYHCFDNSVQLREVRKPSE 601
              QETWYE+FPHFGF+HCFDNSVQLR V+KPS+
Sbjct:   545 PQETWYEKFPHFGFFHCFDNSVQLRAVKKPSD 576


GO:0009507 "chloroplast" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
TAIR|locus:2035898 AT1G42430 "AT1G42430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179979 KTF1 "AT5G04290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
fgenesh2_kg.5__2004__AT3G55760.2
annotation not avaliable (580 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
fgenesh2_kg.3__1291__AT3G12280.1
annotation not avaliable (1012 aa)
       0.402

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00