Citrus Sinensis ID: 007079
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 619 | ||||||
| 225432848 | 574 | PREDICTED: uncharacterized protein LOC10 | 0.920 | 0.993 | 0.636 | 0.0 | |
| 84468392 | 563 | hypothetical protein [Trifolium pratense | 0.840 | 0.923 | 0.645 | 0.0 | |
| 449465699 | 579 | PREDICTED: uncharacterized protein LOC10 | 0.925 | 0.989 | 0.615 | 0.0 | |
| 255552009 | 566 | conserved hypothetical protein [Ricinus | 0.894 | 0.978 | 0.6 | 0.0 | |
| 297816898 | 580 | hypothetical protein ARALYDRAFT_486012 [ | 0.859 | 0.917 | 0.614 | 0.0 | |
| 15228186 | 578 | uncharacterized protein [Arabidopsis tha | 0.854 | 0.915 | 0.612 | 0.0 | |
| 22655111 | 578 | putative protein [Arabidopsis thaliana] | 0.854 | 0.915 | 0.612 | 0.0 | |
| 224102135 | 536 | predicted protein [Populus trichocarpa] | 0.849 | 0.981 | 0.653 | 0.0 | |
| 297737133 | 414 | unnamed protein product [Vitis vinifera] | 0.663 | 0.992 | 0.726 | 1e-179 | |
| 356500589 | 575 | PREDICTED: uncharacterized protein LOC10 | 0.865 | 0.932 | 0.555 | 1e-169 |
| >gi|225432848|ref|XP_002279944.1| PREDICTED: uncharacterized protein LOC100256346 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/605 (63%), Positives = 452/605 (74%), Gaps = 35/605 (5%)
Query: 1 MASQLSHYPRATGHRANPPLIFTTRRTTPQQINFWSRRTGAKVG--VSNSEGGGSYLDMW 58
MAS L RAT A P + R + RR+G + + S+GG SYLDMW
Sbjct: 1 MASHLGASLRATARSAVP---VSHRHKHRVAVTVLVRRSGGRGASRIRVSDGGDSYLDMW 57
Query: 59 QKAVDRDRKEIEFQKIAGSLAESGDVDGNEGGGGRDLTEQLEKKSEEFSKILDVSKEERD 118
+KAVD++RK +EFQ+IAG+ G+ DG + E LE+KS EF KIL+VSKEERD
Sbjct: 58 KKAVDQERKGMEFQRIAGN--SGGEDDG-------ESAEALERKSGEFMKILEVSKEERD 108
Query: 119 RIQRLQVIDRAAAAIAAARAILEEKNGSVVKNGESS-GTAEVSRFVKKNSESSGAAEISP 177
++QR+QVIDRAAAAIAAARAIL+E K+GE G + V E SG+ +
Sbjct: 109 KVQRIQVIDRAAAAIAAARAILQES-----KSGEQELGYSRV--------EGSGSETMHD 155
Query: 178 FVKNSESNGTAEVPERGALSAGIFVPRSGTPGNRTPAPGPDFWSWSPPEDDDRDMRDVRD 237
+NS VP G + +FVP+S T N TP GPDFWSW+PP D + D +
Sbjct: 156 VFQNSV---IFIVP--GTQNGILFVPQSRTSVNSTP--GPDFWSWTPPMDSEGKSDDAGN 208
Query: 238 LQMAEKSSVYPTPVNPVVEKARSVDILPIPFESKLSEPKPDPLLPPFQSLLGVEKEEVSE 297
LQ A SS Y TP ++EK +SVD L IPFES+ SE +P LPP QSL V +VS
Sbjct: 209 LQTARTSSPYLTPAESLMEKEQSVDFLSIPFESRFSESSHNPPLPPLQSLTEVGTVDVSS 268
Query: 298 TNLETPSLEEERDLGALFSAHAAEAAHALDKVDELATRGINPDGSRWWKETGIEQRPDGV 357
++LE PSL++E +LG LF HAAEA HALD+VD + G++PDGSRWW+ETGIEQRPDGV
Sbjct: 269 SSLEMPSLKKEDELGVLFLGHAAEAVHALDEVDGALSHGVSPDGSRWWRETGIEQRPDGV 328
Query: 358 VCRWTMTRGVSADEALEWQEKFWEAADELGHKELGSEKSGRDATGNVWREFWTESMWQNQ 417
VCRWT+ RGVSAD +EW+EKFWEAAD+ +KELGSEKSGRDATGNVWRE+W ESMWQ+
Sbjct: 329 VCRWTLIRGVSADHVVEWEEKFWEAADKFQYKELGSEKSGRDATGNVWREYWKESMWQDC 388
Query: 418 GLVHLEKTADKWGKNGNGDEWQEKWWEHYDASGKAEKWAHKWCSIDPNTQLDAGHAHVWH 477
GL+H+EKTADKWGKNG GDEW EKWWE YDASGKA+KWAHKWCSIDPNTQL+AGHAHVWH
Sbjct: 389 GLMHMEKTADKWGKNGKGDEWHEKWWEQYDASGKADKWAHKWCSIDPNTQLEAGHAHVWH 448
Query: 478 ERWGEKYDGHGGSMKYTDKWAERCEGDGWSKWGDKWDENFDPNSHGVKQGETWWAGKYGE 537
ERWGE+YDGHGGSMKYTDKWAERCEGD W+KWGDKWDENFDPNSHGVKQGETWW GK+GE
Sbjct: 449 ERWGERYDGHGGSMKYTDKWAERCEGDAWTKWGDKWDENFDPNSHGVKQGETWWEGKHGE 508
Query: 538 RWNRTWGERHNGSGWVHKYGKSSSGELWDTHEQQETWYERFPHFGFYHCFDNSVQLREVR 597
RWNRTWGE HNGSGWVHKYGKSSSGE WDTHE+Q+TWYERFPH+GFYHCF+NSVQLREV+
Sbjct: 509 RWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHEEQDTWYERFPHYGFYHCFENSVQLREVQ 568
Query: 598 KPSEF 602
P +
Sbjct: 569 TPPQL 573
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|84468392|dbj|BAE71279.1| hypothetical protein [Trifolium pratense] | Back alignment and taxonomy information |
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| >gi|449465699|ref|XP_004150565.1| PREDICTED: uncharacterized protein LOC101218256 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255552009|ref|XP_002517049.1| conserved hypothetical protein [Ricinus communis] gi|223543684|gb|EEF45212.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297816898|ref|XP_002876332.1| hypothetical protein ARALYDRAFT_486012 [Arabidopsis lyrata subsp. lyrata] gi|297322170|gb|EFH52591.1| hypothetical protein ARALYDRAFT_486012 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|15228186|ref|NP_191135.1| uncharacterized protein [Arabidopsis thaliana] gi|30694316|ref|NP_850708.1| uncharacterized protein [Arabidopsis thaliana] gi|334186001|ref|NP_001190098.1| uncharacterized protein [Arabidopsis thaliana] gi|58652076|gb|AAW80863.1| At3g55760 [Arabidopsis thaliana] gi|332645910|gb|AEE79431.1| uncharacterized protein [Arabidopsis thaliana] gi|332645911|gb|AEE79432.1| uncharacterized protein [Arabidopsis thaliana] gi|332645912|gb|AEE79433.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|22655111|gb|AAM98146.1| putative protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|224102135|ref|XP_002312560.1| predicted protein [Populus trichocarpa] gi|222852380|gb|EEE89927.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297737133|emb|CBI26334.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356500589|ref|XP_003519114.1| PREDICTED: uncharacterized protein LOC100810326 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 619 | ||||||
| TAIR|locus:2079001 | 578 | AT3G55760 [Arabidopsis thalian | 0.714 | 0.764 | 0.617 | 1e-164 | |
| TAIR|locus:2035898 | 426 | AT1G42430 "AT1G42430" [Arabido | 0.423 | 0.615 | 0.439 | 4.8e-62 | |
| TAIR|locus:2179979 | 1493 | KTF1 "AT5G04290" [Arabidopsis | 0.373 | 0.154 | 0.252 | 0.00037 |
| TAIR|locus:2079001 AT3G55760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1603 (569.3 bits), Expect = 1.0e-164, P = 1.0e-164
Identities = 279/452 (61%), Positives = 335/452 (74%)
Query: 153 SSGTAEVSRFVKKNSESSGAAEISPFVKNSESNGTAEVPERGAL---SAGIFVPRSGTPG 209
++ +R + ++ S E P N+ ++ E P+ L S ++VPRS T G
Sbjct: 132 AAAAISAARAILASNNSGDGKEGFPNEDNTVTSEVTETPKNAKLGMWSRTVYVPRSETSG 191
Query: 210 NRTPAPGPDFWSWSPPEXXXXXXXXXXXLQMAEKSSVYPTPVNPVVEKARSVDILPIPFE 269
TP GPDFWSW+PP+ LQ EK + +PT NPV+EK +S D L IP+E
Sbjct: 192 TETP--GPDFWSWTPPQGSEISSVD---LQAVEKPAEFPTLPNPVLEKDKSADSLSIPYE 246
Query: 270 SKLSEPKPDPLLPPFQSLLGVEKEEVSETNLETPSLEEERDLGALFSXXXXXXXXXLDKV 329
S LS + +PPF+SL+ V KE +ET + +L E DL + S LD +
Sbjct: 247 SMLSSERHSFTIPPFESLIEVRKE--AETKPSSETLSTEHDLDLISSANAEEVARVLDSL 304
Query: 330 DELATRGINPDGSRWWKETGIEQRPDGVVCRWTMTRGVSADEALEWQEKFWEAADELGHK 389
DE +T G++ DG +WWK+TG+E+RPDGVVCRWTM RGV+AD +EWQ+K+WEA+D+ G K
Sbjct: 305 DESSTHGVSEDGLKWWKQTGVEKRPDGVVCRWTMIRGVTADGVVEWQDKYWEASDDFGFK 364
Query: 390 ELGSEKSGRDATGNVWREFWTESMWQNQGLVHLEKTADKWGKNGNGDEWQEKWWEHYDAS 449
ELGSEKSGRDATGNVWREFW ESM Q G+VH+EKTADKWGK+G GDEWQEKWWEHYDA+
Sbjct: 365 ELGSEKSGRDATGNVWREFWRESMSQENGVVHMEKTADKWGKSGQGDEWQEKWWEHYDAT 424
Query: 450 GKAEKWAHKWCSIDPNTQLDAGHAHVWHERWGEKYDGHGGSMKYTDKWAERCEGDGWSKW 509
GK+EKWAHKWCSID NT LDAGHAHVWHERWGEKYDG GGS KYTDKWAER GDGW KW
Sbjct: 425 GKSEKWAHKWCSIDRNTPLDAGHAHVWHERWGEKYDGQGGSTKYTDKWAERWVGDGWDKW 484
Query: 510 GDKWDENFDPNSHGVKQGETWWAGKYGERWNRTWGERHNGSGWVHKYGKSSSGELWDTHE 569
GDKWDENF+P++ GVKQGETWW GK+G+RWNR+WGE HNGSGWVHKYGKSSSGE WDTH
Sbjct: 485 GDKWDENFNPSAQGVKQGETWWEGKHGDRWNRSWGEGHNGSGWVHKYGKSSSGEHWDTHV 544
Query: 570 QQETWYERFPHFGFYHCFDNSVQLREVRKPSE 601
QETWYE+FPHFGF+HCFDNSVQLR V+KPS+
Sbjct: 545 PQETWYEKFPHFGFFHCFDNSVQLRAVKKPSD 576
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| TAIR|locus:2035898 AT1G42430 "AT1G42430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2179979 KTF1 "AT5G04290" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh2_kg.5__2004__AT3G55760.2 | annotation not avaliable (580 aa) | ||||||||||
(Arabidopsis lyrata) | |||||||||||
| fgenesh2_kg.3__1291__AT3G12280.1 | • | 0.402 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00