Citrus Sinensis ID: 007115
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 617 | 2.2.26 [Sep-21-2011] | |||||||
| Q0GZS3 | 614 | UDP-sugar pyrophospharyla | N/A | no | 0.925 | 0.929 | 0.804 | 0.0 | |
| Q9C5I1 | 614 | UDP-sugar pyrophosphoryla | yes | no | 0.905 | 0.910 | 0.757 | 0.0 | |
| Q5W915 | 600 | UDP-sugar pyrophospharyla | N/A | no | 0.881 | 0.906 | 0.766 | 0.0 | |
| Q09WE7 | 600 | UDP-sugar pyrophosphoryla | yes | no | 0.881 | 0.906 | 0.764 | 0.0 | |
| A2YGP6 | 616 | UDP-sugar pyrophosphoryla | N/A | no | 0.922 | 0.923 | 0.722 | 0.0 | |
| Q5Z8Y4 | 616 | UDP-sugar pyrophosphoryla | yes | no | 0.901 | 0.902 | 0.727 | 0.0 | |
| Q7A0A0 | 395 | Probable uridylyltransfer | yes | no | 0.450 | 0.703 | 0.272 | 3e-19 | |
| Q6G7E3 | 395 | Probable uridylyltransfer | yes | no | 0.450 | 0.703 | 0.272 | 3e-19 | |
| Q7A4A4 | 395 | Probable uridylyltransfer | yes | no | 0.450 | 0.703 | 0.272 | 3e-19 | |
| Q99S95 | 395 | Probable uridylyltransfer | yes | no | 0.450 | 0.703 | 0.272 | 3e-19 |
| >sp|Q0GZS3|USP_CUCME UDP-sugar pyrophospharylase OS=Cucumis melo GN=USP PE=1 SV=1 | Back alignment and function desciption |
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Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/597 (80%), Positives = 531/597 (88%), Gaps = 26/597 (4%)
Query: 1 MASTVDSAAEQLSKLGIDGAFADSAPNLKKNLHLLSSEQVELAKMLMEMGQSHLFEKWAA 60
MAS++DSAA LS L I+G FA S PNL+KNLHLLS +QVELAK+L+E+GQSHLFE WA
Sbjct: 1 MASSLDSAALTLSNLSINGDFASSLPNLQKNLHLLSPQQVELAKILLELGQSHLFEHWAE 60
Query: 61 PGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTGEVL 120
PGVDDNEK+AFFDQVA+LNSSYPGGL SYIKTAR LLADSK GKNPFDGFTPSVPTGEVL
Sbjct: 61 PGVDDNEKKAFFDQVARLNSSYPGGLASYIKTARGLLADSKEGKNPFDGFTPSVPTGEVL 120
Query: 121 KFGDDTFINYEQAGVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIEC 180
FGDD+F+++E GV+EA+ AAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQ+YIE
Sbjct: 121 TFGDDSFVSFEDRGVREARKAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQSYIEY 180
Query: 181 ILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVAC 240
+LAL+E+S RLA EIPF IMTSDDTH+RT ELLESNSYFGMKP+QVKLLKQEKVAC
Sbjct: 181 VLALREASNRLAGESETEIPFVIMTSDDTHTRTVELLESNSYFGMKPSQVKLLKQEKVAC 240
Query: 241 LDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLF 300
LDDN+ARLA+DP NKYRIQTKPHGHGDVHALLYSSGLLK WH+AGL+WVLFFQDTNGLLF
Sbjct: 241 LDDNEARLAVDPHNKYRIQTKPHGHGDVHALLYSSGLLKNWHNAGLRWVLFFQDTNGLLF 300
Query: 301 KAIPASLGVSATKQYHVNSLAVPRKAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRAT 360
KAIPASLGVSAT++YHVNSLAVPRKAKEAIGGITRLTH DGRSMVINVEYNQLDPLLRAT
Sbjct: 301 KAIPASLGVSATREYHVNSLAVPRKAKEAIGGITRLTHTDGRSMVINVEYNQLDPLLRAT 360
Query: 361 GFPDGDVNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSS 420
GFPDGDVN ETGYSPFPGNINQLILELG Y+EEL KT GAIKEFVNPKYKDA+KTSFKSS
Sbjct: 361 GFPDGDVNNETGYSPFPGNINQLILELGSYIEELSKTQGAIKEFVNPKYKDATKTSFKSS 420
Query: 421 TRLECMMQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAI 480
TRLECMMQDYPKTLPPSA+VGFTVMDTW+AYAPVKNNPEDAAKVPKGNPYHSATSGEMAI
Sbjct: 421 TRLECMMQDYPKTLPPSARVGFTVMDTWVAYAPVKNNPEDAAKVPKGNPYHSATSGEMAI 480
Query: 481 YCANSLILRKVTRVSLSYCKNYSSELFWFLILSTCQAGAQVDDPVQEVFNGQEVEVWPRL 540
Y ANSL+LRK AG +V DPV++VFNGQEVEVWPR+
Sbjct: 481 YRANSLVLRK--------------------------AGVKVADPVEQVFNGQEVEVWPRI 514
Query: 541 TWKPKWGLTFSEIKNKVSGSCSVSQKSTMVIKGRNVVLEDLSLNGALIIDSVDDAEV 597
TWKPKWGLTFSEIK+K++G+CS+S +ST+VIKG+NV L+DLSL+G LI+++ +DAEV
Sbjct: 515 TWKPKWGLTFSEIKSKINGNCSISPRSTLVIKGKNVYLKDLSLDGTLIVNADEDAEV 571
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May function as the terminal enzyme of the myo-inositol oxidation (MIO) pathway. May also play a role in the salvage pathway for synthesis of nucleotide sugars. Can convert galactose-1-phosphate into glucose-1-phosphate by carrying out both the Gal-1-P conversion to UDP-Gal and, following an epimerase step, the subsequent reverse reaction of UDP-Glc to Glc-1-P. Cucumis melo (taxid: 3656) EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 6EC: 4 |
| >sp|Q9C5I1|USP_ARATH UDP-sugar pyrophosphorylase OS=Arabidopsis thaliana GN=USP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5W915|USP_PEA UDP-sugar pyrophospharylase OS=Pisum sativum GN=USP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q09WE7|USP1_SOYBN UDP-sugar pyrophosphorylase 1 OS=Glycine max GN=USP1 PE=1 SV=1 | Back alignment and function description |
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| >sp|A2YGP6|USP_ORYSI UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. indica GN=USP PE=3 SV=2 | Back alignment and function description |
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| >sp|Q5Z8Y4|USP_ORYSJ UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. japonica GN=USP PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7A0A0|URTF_STAAW Probable uridylyltransferase MW2097 OS=Staphylococcus aureus (strain MW2) GN=MW2097 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6G7E3|URTF_STAAS Probable uridylyltransferase SAS2072 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2072 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q7A4A4|URTF_STAAN Probable uridylyltransferase SA1974 OS=Staphylococcus aureus (strain N315) GN=SA1974 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q99S95|URTF_STAAM Probable uridylyltransferase SAV2171 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2171 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 617 | ||||||
| 122172235 | 614 | RecName: Full=UDP-sugar pyrophospharylas | 0.925 | 0.929 | 0.804 | 0.0 | |
| 449463426 | 611 | PREDICTED: UDP-sugar pyrophospharylase-l | 0.920 | 0.929 | 0.800 | 0.0 | |
| 255558548 | 622 | UDP-n-acteylglucosamine pyrophosphorylas | 0.918 | 0.911 | 0.808 | 0.0 | |
| 225459679 | 616 | PREDICTED: UDP-sugar pyrophospharylase i | 0.927 | 0.928 | 0.782 | 0.0 | |
| 359492281 | 644 | PREDICTED: UDP-sugar pyrophospharylase i | 0.927 | 0.888 | 0.747 | 0.0 | |
| 18423407 | 614 | UDP-sugar pyrophosphorylase [Arabidopsis | 0.905 | 0.910 | 0.757 | 0.0 | |
| 297792595 | 614 | hypothetical protein ARALYDRAFT_495327 [ | 0.905 | 0.910 | 0.755 | 0.0 | |
| 84468424 | 603 | hypothetical protein [Trifolium pratense | 0.884 | 0.905 | 0.780 | 0.0 | |
| 75110834 | 600 | RecName: Full=UDP-sugar pyrophospharylas | 0.881 | 0.906 | 0.766 | 0.0 | |
| 351727947 | 600 | UDP-sugar pyrophosphorylase 1 [Glycine m | 0.881 | 0.906 | 0.764 | 0.0 |
| >gi|122172235|sp|Q0GZS3.1|USP_CUCME RecName: Full=UDP-sugar pyrophospharylase; AltName: Full=UDP-galactose/glucose pyrophosphorylase; Short=UGGPase gi|88954061|gb|ABD59006.1| UDP-galactose/glucose pyrophosphorylase [Cucumis melo] | Back alignment and taxonomy information |
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Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/597 (80%), Positives = 531/597 (88%), Gaps = 26/597 (4%)
Query: 1 MASTVDSAAEQLSKLGIDGAFADSAPNLKKNLHLLSSEQVELAKMLMEMGQSHLFEKWAA 60
MAS++DSAA LS L I+G FA S PNL+KNLHLLS +QVELAK+L+E+GQSHLFE WA
Sbjct: 1 MASSLDSAALTLSNLSINGDFASSLPNLQKNLHLLSPQQVELAKILLELGQSHLFEHWAE 60
Query: 61 PGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTGEVL 120
PGVDDNEK+AFFDQVA+LNSSYPGGL SYIKTAR LLADSK GKNPFDGFTPSVPTGEVL
Sbjct: 61 PGVDDNEKKAFFDQVARLNSSYPGGLASYIKTARGLLADSKEGKNPFDGFTPSVPTGEVL 120
Query: 121 KFGDDTFINYEQAGVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIEC 180
FGDD+F+++E GV+EA+ AAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQ+YIE
Sbjct: 121 TFGDDSFVSFEDRGVREARKAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQSYIEY 180
Query: 181 ILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVAC 240
+LAL+E+S RLA EIPF IMTSDDTH+RT ELLESNSYFGMKP+QVKLLKQEKVAC
Sbjct: 181 VLALREASNRLAGESETEIPFVIMTSDDTHTRTVELLESNSYFGMKPSQVKLLKQEKVAC 240
Query: 241 LDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLF 300
LDDN+ARLA+DP NKYRIQTKPHGHGDVHALLYSSGLLK WH+AGL+WVLFFQDTNGLLF
Sbjct: 241 LDDNEARLAVDPHNKYRIQTKPHGHGDVHALLYSSGLLKNWHNAGLRWVLFFQDTNGLLF 300
Query: 301 KAIPASLGVSATKQYHVNSLAVPRKAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRAT 360
KAIPASLGVSAT++YHVNSLAVPRKAKEAIGGITRLTH DGRSMVINVEYNQLDPLLRAT
Sbjct: 301 KAIPASLGVSATREYHVNSLAVPRKAKEAIGGITRLTHTDGRSMVINVEYNQLDPLLRAT 360
Query: 361 GFPDGDVNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSS 420
GFPDGDVN ETGYSPFPGNINQLILELG Y+EEL KT GAIKEFVNPKYKDA+KTSFKSS
Sbjct: 361 GFPDGDVNNETGYSPFPGNINQLILELGSYIEELSKTQGAIKEFVNPKYKDATKTSFKSS 420
Query: 421 TRLECMMQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAI 480
TRLECMMQDYPKTLPPSA+VGFTVMDTW+AYAPVKNNPEDAAKVPKGNPYHSATSGEMAI
Sbjct: 421 TRLECMMQDYPKTLPPSARVGFTVMDTWVAYAPVKNNPEDAAKVPKGNPYHSATSGEMAI 480
Query: 481 YCANSLILRKVTRVSLSYCKNYSSELFWFLILSTCQAGAQVDDPVQEVFNGQEVEVWPRL 540
Y ANSL+LRK AG +V DPV++VFNGQEVEVWPR+
Sbjct: 481 YRANSLVLRK--------------------------AGVKVADPVEQVFNGQEVEVWPRI 514
Query: 541 TWKPKWGLTFSEIKNKVSGSCSVSQKSTMVIKGRNVVLEDLSLNGALIIDSVDDAEV 597
TWKPKWGLTFSEIK+K++G+CS+S +ST+VIKG+NV L+DLSL+G LI+++ +DAEV
Sbjct: 515 TWKPKWGLTFSEIKSKINGNCSISPRSTLVIKGKNVYLKDLSLDGTLIVNADEDAEV 571
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Source: Cucumis melo Species: Cucumis melo Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449463426|ref|XP_004149435.1| PREDICTED: UDP-sugar pyrophospharylase-like [Cucumis sativus] gi|449499082|ref|XP_004160716.1| PREDICTED: UDP-sugar pyrophospharylase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255558548|ref|XP_002520299.1| UDP-n-acteylglucosamine pyrophosphorylase, putative [Ricinus communis] gi|223540518|gb|EEF42085.1| UDP-n-acteylglucosamine pyrophosphorylase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225459679|ref|XP_002285885.1| PREDICTED: UDP-sugar pyrophospharylase isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359492281|ref|XP_003634394.1| PREDICTED: UDP-sugar pyrophospharylase isoform 2 [Vitis vinifera] gi|302141755|emb|CBI18958.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|18423407|ref|NP_568775.1| UDP-sugar pyrophosphorylase [Arabidopsis thaliana] gi|75168956|sp|Q9C5I1.1|USP_ARATH RecName: Full=UDP-sugar pyrophosphorylase; Short=AtUSP gi|13430648|gb|AAK25946.1|AF360236_1 unknown protein [Arabidopsis thaliana] gi|14532822|gb|AAK64093.1| unknown protein [Arabidopsis thaliana] gi|84181457|gb|ABC55066.1| nonspecific UDP-sugar pyrophosphorylase [Arabidopsis thaliana] gi|332008851|gb|AED96234.1| UDP-sugar pyrophosphorylase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297792595|ref|XP_002864182.1| hypothetical protein ARALYDRAFT_495327 [Arabidopsis lyrata subsp. lyrata] gi|297310017|gb|EFH40441.1| hypothetical protein ARALYDRAFT_495327 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|84468424|dbj|BAE71295.1| hypothetical protein [Trifolium pratense] | Back alignment and taxonomy information |
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| >gi|75110834|sp|Q5W915.1|USP_PEA RecName: Full=UDP-sugar pyrophospharylase; Short=PsUSP gi|54650280|dbj|BAD66876.1| UDP-sugar pyrophospharylase [Pisum sativum] | Back alignment and taxonomy information |
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| >gi|351727947|ref|NP_001237434.1| UDP-sugar pyrophosphorylase 1 [Glycine max] gi|122166709|sp|Q09WE7.1|USP1_SOYBN RecName: Full=UDP-sugar pyrophosphorylase 1 gi|82734755|gb|ABB89732.1| UDP-sugar pyrophosphorylase [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 617 | ||||||
| TAIR|locus:2149574 | 614 | USP "UDP-sugar pyrophosphoryla | 0.768 | 0.771 | 0.818 | 1.1e-244 | |
| GENEDB_PFALCIPARUM|PFE0875c | 855 | PFE0875c "hypothetical protein | 0.482 | 0.348 | 0.414 | 7e-77 | |
| UNIPROTKB|C0H4E3 | 855 | PFE0875c "Putative uncharacter | 0.482 | 0.348 | 0.414 | 7e-77 | |
| FB|FBgn0259749 | 536 | mmy "mummy" [Drosophila melano | 0.580 | 0.667 | 0.246 | 1.4e-17 | |
| CGD|CAL0000289 | 486 | UAP1 [Candida albicans (taxid: | 0.492 | 0.625 | 0.253 | 3e-17 | |
| UNIPROTKB|Q5AGB4 | 486 | UAP1 "Putative uncharacterized | 0.492 | 0.625 | 0.253 | 3e-17 | |
| UNIPROTKB|G4MYL3 | 504 | MGG_15671 "Uncharacterized pro | 0.495 | 0.607 | 0.262 | 4.2e-17 | |
| ASPGD|ASPL0000037237 | 505 | ungA [Emericella nidulans (tax | 0.489 | 0.598 | 0.268 | 1e-16 | |
| SGD|S000002261 | 477 | QRI1 "UDP-N-acetylglucosamine | 0.638 | 0.825 | 0.254 | 3.7e-15 | |
| UNIPROTKB|F1NGE7 | 499 | UAP1L1 "Uncharacterized protei | 0.508 | 0.629 | 0.263 | 4.1e-15 |
| TAIR|locus:2149574 USP "UDP-sugar pyrophosphorylase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2050 (726.7 bits), Expect = 1.1e-244, Sum P(2) = 1.1e-244
Identities = 389/475 (81%), Positives = 430/475 (90%)
Query: 17 IDGAFADSAPNLKKNLHLLSSEQVELAKMLMEMGQSHLFEKWAAPGVDDNEKRAFFDQVA 76
+D F S P L NL LLS +Q+ELAK+L+E GQSHLF++W GVDD EK AFFDQ+A
Sbjct: 5 VDSNFFSSVPALHSNLGLLSPDQIELAKILLENGQSHLFQQWPELGVDDKEKLAFFDQIA 64
Query: 77 KLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTGEVLKFGDDTFINYEQAGVK 136
+LNSSYPGGL +YIKTA+ELLADSK GKNP+DGF+PSVP+GE L FG D FI E+ GV
Sbjct: 65 RLNSSYPGGLAAYIKTAKELLADSKVGKNPYDGFSPSVPSGENLTFGTDNFIEMEKRGVV 124
Query: 137 EAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRL-AEGK 195
EA+NAAFVLVAGGLGERLGYNGIKVALP ETTTGTCFLQ+YIE ILALQE+S ++ ++G
Sbjct: 125 EARNAAFVLVAGGLGERLGYNGIKVALPRETTTGTCFLQHYIESILALQEASNKIDSDGS 184
Query: 196 CQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNK 255
++IPF IMTSDDTHSRT +LLE NSYFGMKPTQV LLKQEKVACLDDNDARLA+DP NK
Sbjct: 185 ERDIPFIIMTSDDTHSRTLDLLELNSYFGMKPTQVHLLKQEKVACLDDNDARLALDPHNK 244
Query: 256 YRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQY 315
Y IQTKPHGHGDVH+LLYSSGLL +W +AGLKWVLFFQDTNGLLF AIPASLGVSATKQY
Sbjct: 245 YSIQTKPHGHGDVHSLLYSSGLLHKWLEAGLKWVLFFQDTNGLLFNAIPASLGVSATKQY 304
Query: 316 HVNSLAVPRKAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCETGYSP 375
HVNSLAVPRKAKEAIGGI++LTH DGRSMVINVEYNQLDPLLRA+GFPDGDVNCETG+SP
Sbjct: 305 HVNSLAVPRKAKEAIGGISKLTHVDGRSMVINVEYNQLDPLLRASGFPDGDVNCETGFSP 364
Query: 376 FPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLP 435
FPGNINQLILELGPY +EL+KTGGAIKEFVNPKYKD++KT+FKSSTRLECMMQDYPKTLP
Sbjct: 365 FPGNINQLILELGPYKDELQKTGGAIKEFVNPKYKDSTKTAFKSSTRLECMMQDYPKTLP 424
Query: 436 PSAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYCANSLILRK 490
P+A+VGFTVMD WLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIY ANSLIL+K
Sbjct: 425 PTARVGFTVMDIWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLILQK 479
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| GENEDB_PFALCIPARUM|PFE0875c PFE0875c "hypothetical protein, conserved" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
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| UNIPROTKB|C0H4E3 PFE0875c "Putative uncharacterized protein" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
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| FB|FBgn0259749 mmy "mummy" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| CGD|CAL0000289 UAP1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5AGB4 UAP1 "Putative uncharacterized protein UAP1" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G4MYL3 MGG_15671 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000037237 ungA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| SGD|S000002261 QRI1 "UDP-N-acetylglucosamine pyrophosphorylase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NGE7 UAP1L1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q09WE7 | USP1_SOYBN | 2, ., 7, ., 7, ., 6, 4 | 0.7648 | 0.8816 | 0.9066 | yes | no |
| Q5Z8Y4 | USP_ORYSJ | 2, ., 7, ., 7, ., 6, 4 | 0.7277 | 0.9011 | 0.9025 | yes | no |
| A2YGP6 | USP_ORYSI | 2, ., 7, ., 7, ., 6, 4 | 0.7224 | 0.9222 | 0.9237 | N/A | no |
| Q9C5I1 | USP_ARATH | 2, ., 7, ., 7, ., 6, 4 | 0.7575 | 0.9059 | 0.9104 | yes | no |
| Q5W915 | USP_PEA | 2, ., 7, ., 7, ., 6, 4 | 0.7665 | 0.8816 | 0.9066 | N/A | no |
| Q0GZS3 | USP_CUCME | 2, ., 7, ., 7, ., 6, 4 | 0.8040 | 0.9254 | 0.9299 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.7.64 | 0.979 |
| 3rd Layer | 2.7.7 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00015459001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (616 aa) | |||||||||
(Vitis vinifera) | |||||||||||
 | GSVIVG00032365001 | • | • | 0.905 | |||||||
 | GSVIVG00017022001 | • | • | 0.904 | |||||||
 | GSVIVG00029850001 | • | 0.899 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 617 | |||
| PLN02830 | 615 | PLN02830, PLN02830, UDP-sugar pyrophosphorylase | 0.0 | |
| cd06424 | 315 | cd06424, UGGPase, UGGPase catalyzes the synthesis | 0.0 | |
| cd04180 | 266 | cd04180, UGPase_euk_like, Eukaryotic UGPase-like i | 1e-100 | |
| cd04193 | 323 | cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphoryl | 6e-34 | |
| PTZ00339 | 482 | PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyroph | 3e-26 | |
| PLN02435 | 493 | PLN02435, PLN02435, probable UDP-N-acetylglucosami | 1e-20 | |
| COG4284 | 472 | COG4284, COG4284, UDP-glucose pyrophosphorylase [C | 4e-19 | |
| pfam01704 | 417 | pfam01704, UDPGP, UTP--glucose-1-phosphate uridyly | 2e-07 |
| >gnl|CDD|215444 PLN02830, PLN02830, UDP-sugar pyrophosphorylase | Back alignment and domain information |
|---|
Score = 1026 bits (2654), Expect = 0.0
Identities = 395/588 (67%), Positives = 465/588 (79%), Gaps = 29/588 (4%)
Query: 13 SKLGIDGAFADSAPNLKKNLHLLSSEQVELAKMLMEMGQSHLFEKWAAPGVDDNEKRAFF 72
S L + S P+L NL LLS +Q L + L+E+GQSHLFE W PGVDD++KR
Sbjct: 1 SALSVASKSDSSVPSLHSNLALLSPDQRALVRRLLELGQSHLFEHWPEPGVDDDDKRRLL 60
Query: 73 DQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTGEVLKFGDDTFINYEQ 132
+QVA+L+ SYPGGL +Y+ A+ELLADSK G NPF+G+TPSVP GEVL++G + F+ E+
Sbjct: 61 EQVARLDESYPGGLAAYVSNAKELLADSKEGVNPFEGWTPSVPEGEVLEYGSEEFVELEE 120
Query: 133 AGVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLA 192
AG++EA NAAFVLVAGGLGERLGY+GIKVALP ET TGTC+LQ YIE ILALQE + +
Sbjct: 121 AGLREAGNAAFVLVAGGLGERLGYSGIKVALPTETATGTCYLQLYIESILALQERAKKRK 180
Query: 193 EGKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDP 252
K ++IP IMTSDDTH+RT +LLE N YFGM P QV LLKQEKVACL DNDARLA+DP
Sbjct: 181 AKKGRKIPLVIMTSDDTHARTLKLLERNDYFGMDPDQVTLLKQEKVACLMDNDARLALDP 240
Query: 253 KNKYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSAT 312
+ Y+IQTKPHGHGDVHALLYSSGLL +W AG KWV+FFQDTNGL+FKAIPA+LGVSAT
Sbjct: 241 NDPYKIQTKPHGHGDVHALLYSSGLLDKWLSAGKKWVVFFQDTNGLVFKAIPAALGVSAT 300
Query: 313 KQYHVNSLAVPRKAKEAIGGITRLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCETG 372
K + +NSLAVPRKAKEAIG I +LTH DGR MVINVEYNQLDPLLRATG PDGDVN ETG
Sbjct: 301 KGFDMNSLAVPRKAKEAIGAIAKLTHKDGREMVINVEYNQLDPLLRATGHPDGDVNDETG 360
Query: 373 YSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPK 432
YSPFPGNINQLIL+LGPY++EL KTGG I+EFVNPKYKDA+KT+FKS TRLECMMQDYPK
Sbjct: 361 YSPFPGNINQLILKLGPYVKELAKTGGVIEEFVNPKYKDATKTAFKSPTRLECMMQDYPK 420
Query: 433 TLPPSAKVGFTVMDTWLAYAPVKNNPEDA-AKVPKGNPYHSATSGEMAIYCANSLILRKV 491
TLPPSAKVGFTV D WLAY+PVKN+P D AKVP+GNP HSATSGEMAIY AN LILRK
Sbjct: 421 TLPPSAKVGFTVFDNWLAYSPVKNSPADGAAKVPEGNPTHSATSGEMAIYGANCLILRK- 479
Query: 492 TRVSLSYCKNYSSELFWFLILSTCQAGAQVDDPVQE-VFNGQEVEVWPRLTWKPKWGLTF 550
AGA V++PV++ VFNG EVEV PR+ KP + LTF
Sbjct: 480 -------------------------AGADVEEPVEDVVFNGIEVEVGPRIVLKPAFALTF 514
Query: 551 SEIKNKV-SGSCSVSQKSTMVIKGRNVVLEDLSLNGALIIDSVDDAEV 597
SE+K KV GS +SQ+ST+V++G ++V+E+LSL+GAL++ +V AEV
Sbjct: 515 SELKKKVAPGSVKISQRSTLVLEGADIVIENLSLDGALVVRAVPGAEV 562
|
Length = 615 |
| >gnl|CDD|133046 cd06424, UGGPase, UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose | Back alignment and domain information |
|---|
| >gnl|CDD|133023 cd04180, UGPase_euk_like, Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes | Back alignment and domain information |
|---|
| >gnl|CDD|133036 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc | Back alignment and domain information |
|---|
| >gnl|CDD|240368 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215238 PLN02435, PLN02435, probable UDP-N-acetylglucosamine pyrophosphorylase | Back alignment and domain information |
|---|
| >gnl|CDD|226734 COG4284, COG4284, UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|201928 pfam01704, UDPGP, UTP--glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 617 | |||
| PLN02830 | 615 | UDP-sugar pyrophosphorylase | 100.0 | |
| PLN02435 | 493 | probable UDP-N-acetylglucosamine pyrophosphorylase | 100.0 | |
| PLN02474 | 469 | UTP--glucose-1-phosphate uridylyltransferase | 100.0 | |
| KOG2638 | 498 | consensus UDP-glucose pyrophosphorylase [Carbohydr | 100.0 | |
| cd06424 | 315 | UGGPase UGGPase catalyzes the synthesis of UDP-Glu | 100.0 | |
| PTZ00339 | 482 | UDP-N-acetylglucosamine pyrophosphorylase; Provisi | 100.0 | |
| PF01704 | 420 | UDPGP: UTP--glucose-1-phosphate uridylyltransferas | 100.0 | |
| KOG2388 | 477 | consensus UDP-N-acetylglucosamine pyrophosphorylas | 100.0 | |
| cd04193 | 323 | UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catala | 100.0 | |
| cd00897 | 300 | UGPase_euk Eukaryotic UGPase catalyses the synthes | 100.0 | |
| COG4284 | 472 | UDP-glucose pyrophosphorylase [Carbohydrate transp | 100.0 | |
| cd04180 | 266 | UGPase_euk_like Eukaryotic UGPase-like includes UD | 100.0 | |
| COG1207 | 460 | GlmU N-acetylglucosamine-1-phosphate uridyltransfe | 98.28 | |
| PRK14359 | 430 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.13 | |
| PRK14356 | 456 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.09 | |
| PRK15480 | 292 | glucose-1-phosphate thymidylyltransferase RfbA; Pr | 98.07 | |
| PRK05293 | 380 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.97 | |
| PRK00844 | 407 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.94 | |
| TIGR01207 | 286 | rmlA glucose-1-phosphate thymidylyltransferase, sh | 97.93 | |
| cd04197 | 217 | eIF-2B_epsilon_N The N-terminal domain of epsilon | 97.92 | |
| cd02540 | 229 | GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | 97.79 | |
| cd06425 | 233 | M1P_guanylylT_B_like_N N-terminal domain of the M1 | 97.77 | |
| cd02509 | 274 | GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf | 97.75 | |
| KOG1322 | 371 | consensus GDP-mannose pyrophosphorylase/mannose-1- | 97.73 | |
| cd06422 | 221 | NTP_transferase_like_1 NTP_transferase_like_1 is a | 97.7 | |
| cd04181 | 217 | NTP_transferase NTP_transferases catalyze the tran | 97.7 | |
| PF00483 | 248 | NTP_transferase: Nucleotidyl transferase This Pros | 97.69 | |
| cd02538 | 240 | G1P_TT_short G1P_TT_short is the short form of glu | 97.68 | |
| PRK14352 | 482 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.68 | |
| PRK14360 | 450 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.68 | |
| PRK14353 | 446 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.68 | |
| TIGR02092 | 369 | glgD glucose-1-phosphate adenylyltransferase, GlgD | 97.66 | |
| cd06915 | 223 | NTP_transferase_WcbM_like WcbM_like is a subfamily | 97.64 | |
| cd04189 | 236 | G1P_TT_long G1P_TT_long represents the long form o | 97.63 | |
| PLN02241 | 436 | glucose-1-phosphate adenylyltransferase | 97.62 | |
| cd02524 | 253 | G1P_cytidylyltransferase G1P_cytidylyltransferase | 97.62 | |
| PRK00725 | 425 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.61 | |
| PRK14355 | 459 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.57 | |
| cd06426 | 220 | NTP_transferase_like_2 NTP_trnasferase_like_2 is a | 97.56 | |
| PRK14358 | 481 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.54 | |
| PRK05450 | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 97.5 | |
| TIGR02623 | 254 | G1P_cyt_trans glucose-1-phosphate cytidylyltransfe | 97.49 | |
| PRK02862 | 429 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.49 | |
| cd06428 | 257 | M1P_guanylylT_A_like_N N-terminal domain of M1P_gu | 97.48 | |
| PRK14357 | 448 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.46 | |
| cd02508 | 200 | ADP_Glucose_PP ADP-glucose pyrophosphorylase is in | 97.44 | |
| TIGR01208 | 353 | rmlA_long glucose-1-phosphate thymidylylransferase | 97.4 | |
| COG1213 | 239 | Predicted sugar nucleotidyltransferases [Cell enve | 97.37 | |
| PF01128 | 221 | IspD: 2-C-methyl-D-erythritol 4-phosphate cytidyly | 97.32 | |
| TIGR01173 | 451 | glmU UDP-N-acetylglucosamine diphosphorylase/gluco | 97.3 | |
| cd04198 | 214 | eIF-2B_gamma_N The N-terminal domain of gamma subu | 97.2 | |
| TIGR00454 | 183 | conserved hypothetical protein TIGR00454. At this | 97.17 | |
| TIGR02091 | 361 | glgC glucose-1-phosphate adenylyltransferase. This | 97.12 | |
| TIGR01105 | 297 | galF UTP-glucose-1-phosphate uridylyltransferase, | 97.1 | |
| PRK13385 | 230 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 97.1 | |
| PRK14354 | 458 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.08 | |
| PLN02728 | 252 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 97.0 | |
| cd04182 | 186 | GT_2_like_f GT_2_like_f is a subfamily of the glyc | 96.98 | |
| COG1208 | 358 | GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas | 96.98 | |
| cd02517 | 239 | CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th | 96.95 | |
| TIGR01479 | 468 | GMP_PMI mannose-1-phosphate guanylyltransferase/ma | 96.94 | |
| cd02523 | 229 | PC_cytidylyltransferase Phosphocholine cytidylyltr | 96.92 | |
| PF12804 | 160 | NTP_transf_3: MobA-like NTP transferase domain; PD | 96.86 | |
| COG2266 | 177 | GTP:adenosylcobinamide-phosphate guanylyltransfera | 96.86 | |
| PRK09451 | 456 | glmU bifunctional N-acetylglucosamine-1-phosphate | 96.84 | |
| cd02513 | 223 | CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N- | 96.77 | |
| PRK13368 | 238 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 96.71 | |
| TIGR03310 | 188 | matur_ygfJ molybdenum hydroxylase accessory protei | 96.69 | |
| COG1209 | 286 | RfbA dTDP-glucose pyrophosphorylase [Cell envelope | 96.59 | |
| PRK10122 | 297 | GalU regulator GalF; Provisional | 96.58 | |
| PF14134 | 513 | DUF4301: Domain of unknown function (DUF4301) | 96.54 | |
| PRK00560 | 196 | molybdopterin-guanine dinucleotide biosynthesis pr | 96.48 | |
| cd02503 | 181 | MobA MobA catalyzes the formation of molybdopterin | 96.46 | |
| TIGR02665 | 186 | molyb_mobA molybdopterin-guanine dinucleotide bios | 96.29 | |
| TIGR01099 | 260 | galU UTP-glucose-1-phosphate uridylyltransferase. | 96.21 | |
| TIGR00453 | 217 | ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl | 96.17 | |
| COG1211 | 230 | IspD 4-diphosphocytidyl-2-methyl-D-erithritol synt | 96.16 | |
| cd02516 | 218 | CDP-ME_synthetase CDP-ME synthetase is involved in | 96.1 | |
| cd02541 | 267 | UGPase_prokaryotic Prokaryotic UGPase catalyses th | 96.07 | |
| PRK00155 | 227 | ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl | 96.07 | |
| TIGR03202 | 190 | pucB xanthine dehydrogenase accessory protein pucB | 96.06 | |
| PRK00317 | 193 | mobA molybdopterin-guanine dinucleotide biosynthes | 96.02 | |
| PRK02726 | 200 | molybdopterin-guanine dinucleotide biosynthesis pr | 95.99 | |
| COG0448 | 393 | GlgC ADP-glucose pyrophosphorylase [Carbohydrate t | 95.88 | |
| PLN02917 | 293 | CMP-KDO synthetase | 95.73 | |
| PRK09382 | 378 | ispDF bifunctional 2-C-methyl-D-erythritol 4-phosp | 95.72 | |
| PRK14489 | 366 | putative bifunctional molybdopterin-guanine dinucl | 95.72 | |
| PRK14490 | 369 | putative bifunctional molybdopterin-guanine dinucl | 95.64 | |
| PRK14500 | 346 | putative bifunctional molybdopterin-guanine dinucl | 95.43 | |
| cd02507 | 216 | eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma | 95.27 | |
| PRK13389 | 302 | UTP--glucose-1-phosphate uridylyltransferase subun | 95.26 | |
| cd04183 | 231 | GT2_BcE_like GT2_BcbE_like is likely involved in t | 95.24 | |
| COG0836 | 333 | {ManC} Mannose-1-phosphate guanylyltransferase [Ce | 95.05 | |
| PRK15460 | 478 | cpsB mannose-1-phosphate guanyltransferase; Provis | 94.92 | |
| COG0746 | 192 | MobA Molybdopterin-guanine dinucleotide biosynthes | 94.78 | |
| TIGR00466 | 238 | kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe | 94.6 | |
| KOG1460 | 407 | consensus GDP-mannose pyrophosphorylase [Carbohydr | 93.5 | |
| cd02518 | 233 | GT2_SpsF SpsF is a glycosyltrnasferase implicated | 93.17 | |
| COG4750 | 231 | LicC CTP:phosphocholine cytidylyltransferase invol | 90.54 | |
| COG1210 | 291 | GalU UDP-glucose pyrophosphorylase [Cell envelope | 90.04 | |
| COG2068 | 199 | Uncharacterized MobA-related protein [General func | 86.81 | |
| TIGR03584 | 222 | PseF pseudaminic acid CMP-transferase. The sequenc | 84.43 |
| >PLN02830 UDP-sugar pyrophosphorylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-128 Score=1080.15 Aligned_cols=570 Identities=68% Similarity=1.089 Sum_probs=524.8
Q ss_pred hcCCchhhccCcchhhhccCCChhHHHHHHHHHHCCCcccccccccCCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHH
Q 007115 15 LGIDGAFADSAPNLKKNLHLLSSEQVELAKMLMEMGQSHLFEKWAAPGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTAR 94 (617)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~gQ~HL~~~~~~l~~~~~e~~~L~~qL~~id~~~~~~l~~~~~~~~ 94 (617)
+-++.......+.|+.+++.+|+++++|+++|.++||+|||+||++++.+++||++|++||..+|..|++++.+|+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gQ~HL~~~w~~l~~~~~e~~~L~~qL~~ld~~y~g~l~~~~~~~~ 82 (615)
T PLN02830 3 LSVASKSDSSVPSLHSNLALLSPDQRALVRRLLELGQSHLFEHWPEPGVDDDDKRRLLEQVARLDESYPGGLAAYVSNAK 82 (615)
T ss_pred CcccccccccccccccccccCChhHHHHHHHHHHcCcHHHHhhhhccCCCHHHHHHHHHHHHhccccccchHHHHHHHHH
Confidence 44566666778999999999999999999999999999999999998667999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCCCCCCCCcccccCCChhhhHHHHHhHHhhcceEEEEEcCCcCCcCCccCCcccCCcccCCCcchH
Q 007115 95 ELLADSKAGKNPFDGFTPSVPTGEVLKFGDDTFINYEQAGVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFL 174 (617)
Q Consensus 95 ~~l~~s~~~~~~~~~~~p~vp~~~~l~~~~~~~~~~~~~G~~~l~kvavvlLaGGlGTRLG~~~pK~~lpv~~~~gks~l 174 (617)
+++..+..+.++|+.+.|.+|.+..+++++.+..+|++.|+++|+|+|||+|||||||||||++||++||+++.+++|||
T Consensus 83 ~~l~~s~~~~~~~~~i~P~vp~~~~~~~~~~~~~~~~~~Gl~~l~kvavllLaGGlGTRLG~~~pK~~lpv~~~~gkt~l 162 (615)
T PLN02830 83 ELLADSKEGVNPFEGWTPSVPEGEVLEYGSEEFVELEEAGLREAGNAAFVLVAGGLGERLGYSGIKVALPTETATGTCYL 162 (615)
T ss_pred HHHhhcccCCCchhhcccCCCccccccccchhhhHHHHHHHHHhCcEEEEEecCCcccccCCCCCCcceecccCCCCcHH
Confidence 99986656678999998867888888888877788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhccCCcccccEEEecCccchHHHHHHHHhCCCCCCCCCcEEEEEeCceeeEecCCCceecCCCC
Q 007115 175 QNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKN 254 (617)
Q Consensus 175 ql~~~~i~~l~~~~~~~~~g~~~~iPl~IMTS~~T~~~T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~ 254 (617)
|++++||+++|+++.+...+..+.||||||||++||++|++||++|+|||++++||+||+|+++||+++++|++++++.+
T Consensus 163 ql~~e~I~~lq~la~~~~~~~~~~IPl~IMTS~~T~~~T~~~~~~n~~FGl~~~~v~~F~Q~~~P~~~~~~g~~~l~~~d 242 (615)
T PLN02830 163 QLYIESILALQERAKKRKAKKGRKIPLVIMTSDDTHARTLKLLERNDYFGMDPDQVTLLKQEKVACLMDNDARLALDPND 242 (615)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCceEEEECCcchhHHHHHHHHHCCccCCCccceEEEEcCcceeEecCCCcccccCCC
Confidence 99999999999998754233346899999999999999999999999999999999999999999998888999995555
Q ss_pred CCccccccCCCchhhHhhhhcChhHHHHHcCceEEEEEeCCCccccccchHHHHHHhhcCCceeEEeeeCCcccccceEE
Q 007115 255 KYRIQTKPHGHGDVHALLYSSGLLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPRKAKEAIGGIT 334 (617)
Q Consensus 255 ~~~i~~~P~GhGdi~~aL~~sG~ld~l~~~G~eyi~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~~~E~vG~i~ 334 (617)
+++++|+|+||||+|.+|++||+|++|+++|+||+||+||||+|++.+||.|||||+.++++|++|||+|+|+|++|++|
T Consensus 243 ~~~i~~~P~GhGdi~~aL~~sGlLd~l~~~G~~yi~v~~vDN~L~~~Adp~flG~~~~~~~d~~~kvv~K~~~E~vGvi~ 322 (615)
T PLN02830 243 PYKIQTKPHGHGDVHALLYSSGLLDKWLSAGKKWVVFFQDTNGLVFKAIPAALGVSATKGFDMNSLAVPRKAKEAIGAIA 322 (615)
T ss_pred CCccccCCCCccHHHHHHHHCCCHHHHHHcCCEEEEEEeccchhhhcccHHHhHHHHhcCCceEEEEEECCCCcccceEE
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCceeEEEEeecCCCHHHhhcCCCCCCCccCCCCCCCccceeeeeeehhhhHHHHhhcCCccccccCCcccCCCC
Q 007115 335 RLTHADGRSMVINVEYNQLDPLLRATGFPDGDVNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASK 414 (617)
Q Consensus 335 ~~~~~dG~~~v~nVEYsel~~~l~~~~~~~g~l~~~~gf~~f~gNinn~~~~L~~~~~~l~~~~~~l~~~vnpk~~d~~~ 414 (617)
++++.||+..++||||+|++++++.+++|+|++.+++||++|||||||+|++|++|+++|+++.+.||+||||||.|+++
T Consensus 323 ~~~~~dG~~l~~vVEYse~~~ll~~a~~p~g~l~~~~~~s~FPgNtN~L~v~L~a~~~~l~~~~~~lp~ivNpK~~d~~~ 402 (615)
T PLN02830 323 KLTHKDGREMVINVEYNQLDPLLRATGHPDGDVNDETGYSPFPGNINQLILKLGPYVKELAKTGGVIEEFVNPKYKDATK 402 (615)
T ss_pred EEecCCCCeeeEEEeecccCHHHHhccCCCcccccccccccCCCCceeeEeeHHHHHHHHHhCCCccceeccCcccCCCC
Confidence 99889999776779999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred CcccCcchhhhhhcccccCCCCCCceeEEEecCCceeecccCCCccc-ccCCCCCCCCChhhHHHHHHHHHHHHHHhhcc
Q 007115 415 TSFKSSTRLECMMQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDA-AKVPKGNPYHSATSGEMAIYCANSLILRKVTR 493 (617)
Q Consensus 415 ~~~~~~~kLE~~m~D~~~~f~~~~~~g~~~V~R~~~FsPvKN~~~~~-~~~~~g~~~dsp~t~~~dl~~~~~~~L~~~~~ 493 (617)
+.++.+++||||||||++.+..+.++||++++||.+|+||||+..+| +|+++|++++||++++.|+|+.++++|+.
T Consensus 403 ~v~q~~trle~~mq~f~~~~~~~~~vg~~v~~~~~~f~PVKn~~s~a~~k~~~~~~~~~~~s~e~d~y~~~~llL~~--- 479 (615)
T PLN02830 403 TAFKSPTRLECMMQDYPKTLPPSAKVGFTVFDNWLAYSPVKNSPADGAAKVPEGNPTHSATSGEMAIYGANCLILRK--- 479 (615)
T ss_pred ceeecchHHHHHHHHHhhhcCcccccCceecCchheeccccCChHHhhhhcccCCCccCcchhhHHHHHHHHHHHHh---
Confidence 99999999999999999999877899998888999999999996666 66799999999999999999999999987
Q ss_pred ccccccccCCchhHHHhhhhccccCeeecCccccccCCeeecCCCeEEEcCCCCCCHHHHHhhc-CCCCCCCCCceEEEE
Q 007115 494 VSLSYCKNYSSELFWFLILSTCQAGAQVDDPVQEVFNGQEVEVWPRLTWKPKWGLTFSEIKNKV-SGSCSVSQKSTMVIK 572 (617)
Q Consensus 494 ~~~~y~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~i~l~p~f~~~~~~~~~r~-~~~~~i~~~s~L~v~ 572 (617)
|++|.++... . ..+++++++.+|.|+|+|.|++++++|++|| +++|+|+++|+|+|+
T Consensus 480 -s~~~~~~~~~---------------~------~~~~~~~~~~~P~I~L~p~f~~~~~~~~~k~~~~~~si~~~s~L~v~ 537 (615)
T PLN02830 480 -AGADVEEPVE---------------D------VVFNGIEVEVGPRIVLKPAFALTFSELKKKVAPGSVKISQRSTLVLE 537 (615)
T ss_pred -cCCccccCcc---------------c------cccCCcccCCCCeEEECchhhhHHHHHHHHhcCCCCcccCCCeEEEE
Confidence 6666554321 1 1356678899999999999999999999999 999999999999999
Q ss_pred eceEEeeCeEEEEEEEEEcCCCCeEEecCCeEEeCCe
Q 007115 573 GRNVVLEDLSLNGALIIDSVDDAEVCYIMPILRYGGQ 609 (617)
Q Consensus 573 g~~~~~~~v~l~G~v~I~a~~~~~~~i~~~~~~~~~~ 609 (617)
|+++||+||+|+|+|+|.|++|++++|...+|.+.|-
T Consensus 538 G~~~~~~~v~LdG~viI~a~~~~~~~i~g~~v~N~g~ 574 (615)
T PLN02830 538 GADIVIENLSLDGALVVRAVPGAEVTVGGLRVKNKGW 574 (615)
T ss_pred eeeEEecCeEEEEEEEEEcCCCCeEEecCeEEecCCc
Confidence 9999999999999999999999999994435555443
|
|
| >PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase | Back alignment and domain information |
|---|
| >PLN02474 UTP--glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >KOG2638 consensus UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose | Back alignment and domain information |
|---|
| >PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2 | Back alignment and domain information |
|---|
| >KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc | Back alignment and domain information |
|---|
| >cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose | Back alignment and domain information |
|---|
| >COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes | Back alignment and domain information |
|---|
| >COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional | Back alignment and domain information |
|---|
| >PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form | Back alignment and domain information |
|---|
| >cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2 | Back alignment and domain information |
|---|
| >cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | Back alignment and domain information |
|---|
| >cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins | Back alignment and domain information |
|---|
| >cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose | Back alignment and domain information |
|---|
| >KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
| >cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars | Back alignment and domain information |
|---|
| >PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry | Back alignment and domain information |
|---|
| >cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
| >PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit | Back alignment and domain information |
|---|
| >cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases | Back alignment and domain information |
|---|
| >cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
| >PLN02241 glucose-1-phosphate adenylyltransferase | Back alignment and domain information |
|---|
| >cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose | Back alignment and domain information |
|---|
| >PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
| >PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase | Back alignment and domain information |
|---|
| >PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch | Back alignment and domain information |
|---|
| >TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form | Back alignment and domain information |
|---|
| >COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate [] | Back alignment and domain information |
|---|
| >TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
| >cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2 | Back alignment and domain information |
|---|
| >TIGR00454 conserved hypothetical protein TIGR00454 | Back alignment and domain information |
|---|
| >TIGR02091 glgC glucose-1-phosphate adenylyltransferase | Back alignment and domain information |
|---|
| >TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit | Back alignment and domain information |
|---|
| >PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function | Back alignment and domain information |
|---|
| >COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide | Back alignment and domain information |
|---|
| >TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | Back alignment and domain information |
|---|
| >cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline | Back alignment and domain information |
|---|
| >PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B | Back alignment and domain information |
|---|
| >COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety | Back alignment and domain information |
|---|
| >PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family | Back alignment and domain information |
|---|
| >COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK10122 GalU regulator GalF; Provisional | Back alignment and domain information |
|---|
| >PF14134 DUF4301: Domain of unknown function (DUF4301) | Back alignment and domain information |
|---|
| >PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
| >cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide | Back alignment and domain information |
|---|
| >TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial | Back alignment and domain information |
|---|
| >TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] | Back alignment and domain information |
|---|
| >cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production | Back alignment and domain information |
|---|
| >cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose | Back alignment and domain information |
|---|
| >PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed | Back alignment and domain information |
|---|
| >TIGR03202 pucB xanthine dehydrogenase accessory protein pucB | Back alignment and domain information |
|---|
| >PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed | Back alignment and domain information |
|---|
| >PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
| >COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02917 CMP-KDO synthetase | Back alignment and domain information |
|---|
| >PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional | Back alignment and domain information |
|---|
| >PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional | Back alignment and domain information |
|---|
| >PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional | Back alignment and domain information |
|---|
| >PRK14500 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MoaC/MobA; Provisional | Back alignment and domain information |
|---|
| >cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity | Back alignment and domain information |
|---|
| >PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional | Back alignment and domain information |
|---|
| >cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule | Back alignment and domain information |
|---|
| >COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional | Back alignment and domain information |
|---|
| >COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase | Back alignment and domain information |
|---|
| >KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat | Back alignment and domain information |
|---|
| >COG4750 LicC CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG2068 Uncharacterized MobA-related protein [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03584 PseF pseudaminic acid CMP-transferase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 617 | ||||
| 3oh0_A | 641 | Protein Structure Of Usp From L. Major Bound To Uri | 2e-72 | ||
| 3ogz_A | 630 | Protein Structure Of Usp From L. Major In Apo-Form | 2e-72 | ||
| 2yqc_A | 486 | Crystal Structure Of Uridine-Diphospho-N-Acetylgluc | 4e-19 | ||
| 1jv1_A | 505 | Crystal Structure Of Human Agx1 Complexed With Udpg | 5e-12 | ||
| 1jvd_A | 522 | Crystal Structure Of Human Agx2 Complexed With Udpg | 5e-12 | ||
| 1vm8_A | 534 | Crystal Structure Of Udp-N-Acetylglucosamine Pyroph | 5e-11 | ||
| 3oc9_A | 405 | Crystal Structure Of Putative Udp-N-Acetylglucosami | 1e-08 | ||
| 3gue_A | 484 | Crystal Structure Of Udp-Glucose Phosphorylase From | 9e-05 |
| >pdb|3OH0|A Chain A, Protein Structure Of Usp From L. Major Bound To Uridine-5'- Triphosphate Length = 641 | Back alignment and structure |
|
| >pdb|3OGZ|A Chain A, Protein Structure Of Usp From L. Major In Apo-Form Length = 630 | Back alignment and structure |
| >pdb|2YQC|A Chain A, Crystal Structure Of Uridine-Diphospho-N-Acetylglucosamine Pyrophosphorylase From Candida Albicans, In The Apo-Like Form Length = 486 | Back alignment and structure |
| >pdb|1JV1|A Chain A, Crystal Structure Of Human Agx1 Complexed With Udpglcnac Length = 505 | Back alignment and structure |
| >pdb|1JVD|A Chain A, Crystal Structure Of Human Agx2 Complexed With Udpglcnac Length = 522 | Back alignment and structure |
| >pdb|1VM8|A Chain A, Crystal Structure Of Udp-N-Acetylglucosamine Pyrophosphorylase (Agx2) From Mus Musculus At 2.50 A Resolution Length = 534 | Back alignment and structure |
| >pdb|3OC9|A Chain A, Crystal Structure Of Putative Udp-N-Acetylglucosamine Pyrophosphorylase From Entamoeba Histolytica Length = 405 | Back alignment and structure |
| >pdb|3GUE|A Chain A, Crystal Structure Of Udp-Glucose Phosphorylase From Trypanosoma Brucei, (Tb10.389.0330) Length = 484 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Length = 630 | Back alignment and structure |
|---|
Score = 379 bits (974), Expect = e-124
Identities = 189/597 (31%), Positives = 273/597 (45%), Gaps = 77/597 (12%)
Query: 35 LSSEQVELAKMLME--MGQSHLFEKWAAPGVDDN-EKRAFFDQVAKLNSSYPGGLKSYIK 91
+S L + L + Q HLFE W + N + A + ++ YPGG+ YI+
Sbjct: 5 SNSNLQALREELCTPGLDQGHLFEGWPETVDECNERQIALLTDLYMFSNMYPGGVAQYIR 64
Query: 92 TARELLADSKAGKNP-FDGFTPSVPTGEVLKFGDDTFINYEQAGVKEAKNAAFVLVAGGL 150
ELLA + P + L E AG FVLVAGGL
Sbjct: 65 NGHELLARESEEVDFAALEMPPLIFEAPSLHRRTAERTALENAGTAMLCKTVFVLVAGGL 124
Query: 151 GERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTH 210
GERLGY+ IKV+LP ET T T +L Y+ + +E+PF IMTSDDTH
Sbjct: 125 GERLGYSSIKVSLPVETATNTTYLAYYLRWAQRVGG----------KEVPFVIMTSDDTH 174
Query: 211 SRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHA 270
RT +LL ++ + +LKQ +V C D+ A LA+D K + KPHGHGDVH+
Sbjct: 175 DRTLQLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLALDETGK--LLRKPHGHGDVHS 229
Query: 271 LLYSSG------------------LLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSAT 312
L+Y++ L+ +W AG + ++F QDTN IP SL +SA
Sbjct: 230 LIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIPISLALSAE 289
Query: 313 KQYHVNSLAVPRKAKEAIGGITRLTHADGR-SMVINVEYNQLDPLLRATGFPDGD-VNCE 370
+N +PR KE IG + R G +V NVEYN + RA GD V+
Sbjct: 290 HSLDMNFTCIPRVPKEPIGLLCRTKKNSGDPWLVANVEYNVFAEVSRALNKDGGDEVSDP 349
Query: 371 TGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDY 430
TG+SPFPG++N L+ +L Y++ L+++ G + EF+NPKY D ++ SFK R+E +MQD
Sbjct: 350 TGFSPFPGSVNTLVFKLSSYVDRLRESHGIVPEFINPKYSDETRRSFKKPARIESLMQDI 409
Query: 431 PKTLPPS-AKVGFTVMDTWLAYAPVKNNPEDA-AKVPKGNPYHSATSGEMAIYCANSLIL 488
+VG TV + + +Y PVKN+ E+A V +GN + A +GE A Y L
Sbjct: 410 ALLFSEDDYRVGGTVFERF-SYQPVKNSLEEAAGLVAQGNGAYCAATGEAAFYELQRRRL 468
Query: 489 RKVTRVSLSYCKNYSSELFWFLILSTCQAGAQVDDP----VQEVFNGQEVEVWPRLTWKP 544
+ G + V + V ++P +
Sbjct: 469 KA--------------------------IGLPLFYSSQPEVTVAKDAFGVRLFPIIVLDT 502
Query: 545 KWGLTFSEI----KNKVSGSCSVSQKSTMVIKGRNVVLEDLSLNGALIIDSVDDAEV 597
+ S + Q ST++++G V++E L L GAL I D+
Sbjct: 503 VCASSGSLDDLARVFPTPEKVHIDQHSTLIVEG-RVIIESLELYGALTIRGPTDSMA 558
|
| >2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Length = 486 | Back alignment and structure |
|---|
| >1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Length = 505 | Back alignment and structure |
|---|
| >3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Length = 405 | Back alignment and structure |
|---|
| >2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Length = 505 | Back alignment and structure |
|---|
| >3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Length = 484 | Back alignment and structure |
|---|
| >3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Length = 528 | Back alignment and structure |
|---|
| >2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Length = 488 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 617 | |||
| 3ogz_A | 630 | UDP-sugar pyrophosphorylase; LEFT handed beta heli | 100.0 | |
| 3r3i_A | 528 | UTP--glucose-1-phosphate uridylyltransferase; ross | 100.0 | |
| 3gue_A | 484 | UTP-glucose-1-phosphate uridylyltransferase 2; pho | 100.0 | |
| 2yqc_A | 486 | UDP-N-acetylglucosamine pyrophosphorylase; uridine | 100.0 | |
| 2oeg_A | 505 | UTP-glucose-1-phosphate uridylyltransferase 2, put | 100.0 | |
| 1jv1_A | 505 | Glcnac1P uridyltransferase isoform 1: AGX1; nucleo | 100.0 | |
| 2icy_A | 469 | Probable UTP-glucose-1-phosphate uridylyltransfera | 100.0 | |
| 3oc9_A | 405 | UDP-N-acetylglucosamine pyrophosphorylase; structu | 100.0 | |
| 2i5k_A | 488 | UTP--glucose-1-phosphate uridylyltransferase; LEFT | 100.0 | |
| 3st8_A | 501 | Bifunctional protein GLMU; acetyltransferase, pyro | 98.44 | |
| 4ecm_A | 269 | Glucose-1-phosphate thymidylyltransferase; HET: DA | 97.96 | |
| 3oam_A | 252 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 97.84 | |
| 2qh5_A | 308 | PMI, ALGA, mannose-6-phosphate isomerase; structur | 97.82 | |
| 1fxo_A | 293 | Glucose-1-phosphate thymidylyltransferase; rhamnos | 97.72 | |
| 1yp2_A | 451 | Glucose-1-phosphate adenylyltransferase small subu | 97.71 | |
| 3brk_X | 420 | Glucose-1-phosphate adenylyltransferase; ADP-gluco | 97.69 | |
| 1h7e_A | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; n | 97.58 | |
| 1lvw_A | 295 | Glucose-1-phosphate thymidylyltransferase; protein | 97.55 | |
| 3k8d_A | 264 | 3-deoxy-manno-octulosonate cytidylyltransferase; K | 97.54 | |
| 2y6p_A | 234 | 3-deoxy-manno-octulosonate cytidylyltransferase; l | 97.53 | |
| 1mc3_A | 296 | Glucose-1-phosphate thymidylyltransferase; glucose | 97.46 | |
| 3tqd_A | 256 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 97.43 | |
| 4fce_A | 459 | Bifunctional protein GLMU; GLMU. csgid, niaid, str | 97.42 | |
| 3pnn_A | 303 | Conserved domain protein; structural genomics, PSI | 97.37 | |
| 1hm9_A | 468 | GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr | 97.36 | |
| 2v0h_A | 456 | Bifunctional protein GLMU; cell WALL, magnesium, c | 97.31 | |
| 2wee_A | 197 | MOBA-related protein; unknown function; 1.65A {Myc | 97.21 | |
| 2xwl_A | 223 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; | 97.21 | |
| 2waw_A | 199 | MOBA relate protein; unknown function; HET: PGE; 1 | 97.17 | |
| 1qwj_A | 229 | Cytidine monophospho-N-acetylneuraminic acid synth | 97.16 | |
| 1vic_A | 262 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 97.16 | |
| 3q80_A | 231 | 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; | 97.14 | |
| 1tzf_A | 259 | Glucose-1-phosphate cytidylyltransferase; nucleoti | 97.07 | |
| 3juk_A | 281 | UDP-glucose pyrophosphorylase (GALU); transfer; HE | 97.07 | |
| 3f1c_A | 246 | Putative 2-C-methyl-D-erythritol 4-phosphate cytid | 97.07 | |
| 1ezi_A | 228 | CMP-N-acetylneuraminic acid synthetase; homodimer, | 97.03 | |
| 1vgw_A | 231 | 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; | 97.02 | |
| 2yc3_A | 228 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran | 96.91 | |
| 2vsh_A | 236 | TARI, 2-C-methyl-D-erythritol 4-phosphate cytidyly | 96.86 | |
| 1i52_A | 236 | 4-diphosphocytidyl-2-C-methylerythritol synthase; | 96.86 | |
| 3rsb_A | 196 | Adenosylcobinamide-phosphate guanylyltransferase; | 96.85 | |
| 1vpa_A | 234 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; | 96.76 | |
| 3d5n_A | 197 | Q97W15_sulso; NESG, SSR125, structural genomics, P | 96.73 | |
| 1e5k_A | 201 | Molybdopterin-guanine dinucleotide biosynthesis pr | 96.69 | |
| 1jyk_A | 254 | LICC protein, CTP:phosphocholine cytidylytransfera | 96.64 | |
| 4fcu_A | 253 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 96.6 | |
| 2px7_A | 236 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 96.58 | |
| 4evw_A | 255 | Nucleoside-diphosphate-sugar pyrophosphorylase; st | 96.48 | |
| 2e3d_A | 302 | UTP--glucose-1-phosphate uridylyltransferase; UDP- | 96.47 | |
| 2ux8_A | 297 | Glucose-1-phosphate uridylyltransferase; UGPG, GAL | 96.42 | |
| 3ngw_A | 208 | Molybdopterin-guanine dinucleotide biosynthesis P | 96.42 | |
| 2x65_A | 336 | Mannose-1-phosphate guanylyltransferase; nucleotid | 96.39 | |
| 2xme_A | 232 | CTP-inositol-1-phosphate cytidylyltransferase; CDP | 96.32 | |
| 2e8b_A | 201 | Probable molybdopterin-guanine dinucleotide biosy | 96.16 | |
| 2pa4_A | 323 | UTP-glucose-1-phosphate uridylyltransferase; phosp | 96.1 | |
| 1w55_A | 371 | ISPD/ISPF bifunctional enzyme; biosynthetic pathwa | 95.66 | |
| 2cu2_A | 337 | Putative mannose-1-phosphate guanylyl transferase; | 95.33 | |
| 2ggo_A | 401 | 401AA long hypothetical glucose-1-phosphate thymid | 95.14 | |
| 2dpw_A | 232 | Hypothetical protein TTHA0179; transferase, struct | 94.74 |
| >3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-119 Score=1003.69 Aligned_cols=529 Identities=36% Similarity=0.609 Sum_probs=479.2
Q ss_pred hhHHHHHHHHHH--CCCccccccccc-CCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHhhccCCCCCCCCCC--
Q 007115 37 SEQVELAKMLME--MGQSHLFEKWAA-PGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFT-- 111 (617)
Q Consensus 37 ~~~~~l~~~L~~--~gQ~HL~~~~~~-l~~~~~e~~~L~~qL~~id~~~~~~l~~~~~~~~~~l~~s~~~~~~~~~~~-- 111 (617)
.+.++|+++|.+ +||+|||+||++ ++..++||++|++||..||..|+++|..|++++++++ .+..+.++++.+.
T Consensus 7 ~~~~~L~~~l~~~~~gQ~HLf~~w~~~l~~~~~e~~~L~~qL~~~d~~~~~gl~~~~~~a~~~l-~~~~~~~~~~~~~p~ 85 (630)
T 3ogz_A 7 SNLQALREELCTPGLDQGHLFEGWPETVDECNERQIALLTDLYMFSNMYPGGVAQYIRNGHELL-ARESEEVDFAALEMP 85 (630)
T ss_dssp HHHHHHHHHHTSTTTCCGGGGTTCCSSGGGCCHHHHHHHHHHHHGGGTSTTHHHHHHHHHHHHH-HHHTSCCCCSEEECC
T ss_pred hhHHHHHHHhhhccCCchhhhhhcccccCCCHHHHHHHHHHHHhhChhhhhhHHHHHHHHHHHh-hccccCCcccccccC
Confidence 456889999997 999999999998 5333899999999999999999999999999999999 4445567777777
Q ss_pred CCCCCcccccCCChhhhHHHHHhHHhhcceEEEEEcCCcCCcCCccCCcccCCcccCCCcchHHHHHHHHHHHHHHhhhh
Q 007115 112 PSVPTGEVLKFGDDTFINYEQAGVKEAKNAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRL 191 (617)
Q Consensus 112 p~vp~~~~l~~~~~~~~~~~~~G~~~l~kvavvlLaGGlGTRLG~~~pK~~lpv~~~~gks~lql~~~~i~~l~~~~~~~ 191 (617)
|.+|.+..++.+++++.+|+++|+++|+|+|||+||||||||||+++||+++|+++++++||||++++||+ ++++
T Consensus 86 P~~~~~~~l~~~~~~~~~~~~~Gl~~i~kvavvllaGGlGTRLG~~~pK~~lpv~~~s~ks~lql~~e~i~---~~~g-- 160 (630)
T 3ogz_A 86 PLIFEAPSLHRRTAERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKVSLPVETATNTTYLAYYLRWAQ---RVGG-- 160 (630)
T ss_dssp SCEEECCCTTCCCHHHHHHHHHHHHHGGGEEEEEECCCEEGGGTEEEEGGGSBSCTTTCCBHHHHHHHHHH---HHHC--
T ss_pred CCCCccccccCCHHHHHHHHHHhHHHHhhceEEEecCCcccccCCCCCcccceecCCCCCcHHHHHHHHHH---HHhC--
Confidence 33345666777778889999999999999999999999999999999999999999999999999999999 3454
Q ss_pred ccCCcccccEEEecCccchHHHHHHHHhCCCCCCCCCcEEEEEeCceeeEecCCCceecCCCCCCccccccCCCchhhHh
Q 007115 192 AEGKCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHAL 271 (617)
Q Consensus 192 ~~g~~~~iPl~IMTS~~T~~~T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~a 271 (617)
+.||||||||++||++|++||++ ||++++||+||+|+++||+++++|++++ +++++++|+|+||||+|.+
T Consensus 161 -----~~iPl~IMTS~~T~~~T~~~~~~---fgl~~~~V~~F~Q~~~P~i~~~~g~l~l--~~~~~i~~~P~GhGdv~~a 230 (630)
T 3ogz_A 161 -----KEVPFVIMTSDDTHDRTLQLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLAL--DETGKLLRKPHGHGDVHSL 230 (630)
T ss_dssp -----TTCCEEEEECTTTHHHHHHHHHH---TTCCCTTEEEEECCCEECBSSTTCCBCB--CTTSSBCEECCCTTHHHHH
T ss_pred -----CCCcEEEEecccchHHHHHHHHH---hCCCcccEEEEEcCCEEEEecCCCceee--cCCCcccCCCCCCHHHHHH
Confidence 58999999999999999999999 9999999999999999999878899999 6677999999999999999
Q ss_pred hhhcC------------------hhHHHHHcCceEEEEEeCCCccccccchHHHHHHhhcCCceeEEeeeCCcccccceE
Q 007115 272 LYSSG------------------LLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPRKAKEAIGGI 333 (617)
Q Consensus 272 L~~sG------------------~ld~l~~~G~eyi~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~~~E~vG~i 333 (617)
|+++| +|++|+++|+||+||+||||+|++++||.||||++.+++||++|||+|+|+|++|++
T Consensus 231 L~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~p~E~vG~l 310 (630)
T 3ogz_A 231 IYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIPISLALSAEHSLDMNFTCIPRVPKEPIGLL 310 (630)
T ss_dssp HHHCBC--------------CCBHHHHHHHTTCCEEEEECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCCSSCSSCEE
T ss_pred HHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEEccCCccccccCHHHhHHHHhcCCCEEEEEEECCCCcceeeE
Confidence 99999 999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCce-eEEEEeecCCCHHHhhcCCCCCC-CccCCCCCCCccceeeeeeehhhhHHHHhhcCCccccccCCcccC
Q 007115 334 TRLTHADGRS-MVINVEYNQLDPLLRATGFPDGD-VNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPKYKD 411 (617)
Q Consensus 334 ~~~~~~dG~~-~v~nVEYsel~~~l~~~~~~~g~-l~~~~gf~~f~gNinn~~~~L~~~~~~l~~~~~~l~~~vnpk~~d 411 (617)
|++++.||++ +|+||||+|++++++..++++|+ +.+.++|++||||||||||+|++|+++|..+.+.||+||||||.|
T Consensus 311 ~~~~~~dGk~~~v~vVEYsei~~~~~~~~~~~g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~~~~~ip~~vNpK~~d 390 (630)
T 3ogz_A 311 CRTKKNSGDPWLVANVEYNVFAEVSRALNKDGGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRESHGIVPEFINPKYSD 390 (630)
T ss_dssp EEEESSTTSCCEEEEECHHHHHHHHHHC------------CCCSSCEEEEEEEEEHHHHHHHHHHHTTCCCCEECCCBSS
T ss_pred EEEecCCCceeeeeEEEeccCCHhHhhccCCCccccccccccccccccceeeeEEHHHHHHHHHhccCccceecCCcccC
Confidence 9988889999 87889999999999999988888 777788999999999999999999999998889999999999999
Q ss_pred CCCCcccCcchhhhhhcccccCCCCCC-ceeEEEecCCceeecccCCCcccc-cCCCCCCCCChhhHHHHHHHHHHHHHH
Q 007115 412 ASKTSFKSSTRLECMMQDYPKTLPPSA-KVGFTVMDTWLAYAPVKNNPEDAA-KVPKGNPYHSATSGEMAIYCANSLILR 489 (617)
Q Consensus 412 ~~~~~~~~~~kLE~~m~D~~~~f~~~~-~~g~~~V~R~~~FsPvKN~~~~~~-~~~~g~~~dsp~t~~~dl~~~~~~~L~ 489 (617)
++++.+++++||||||||++++|+... ++++++||| +||+||||++++|+ |+++|++.|||.||++|+|+++++||+
T Consensus 391 ~~~~~~~~~~qLEt~m~d~~~~F~~~~~~v~~~~V~R-~~F~PVKn~~~~a~~k~~~g~~~~sp~t~~~dly~~~~~~L~ 469 (630)
T 3ogz_A 391 ETRRSFKKPARIESLMQDIALLFSEDDYRVGGTVFER-FSYQPVKNSLEEAAGLVAQGNGAYCAATGEAAFYELQRRRLK 469 (630)
T ss_dssp SSSCCBSSCBCEECCGGGGGGGCCTTTCCEEEEECCG-GGCCBCCBCHHHHHHHHHTTCCCCBHHHHHHHHHHHHHHHHH
T ss_pred CcccccCcchhhhhHHHHHHHhccccCcceeEEEECC-CeeecccCChhHhhhhhccCCCcCChHHHHHHHHHHHHHHHH
Confidence 998889899999999999999997455 889999999 99999999998884 459999999999999999999999999
Q ss_pred hhccccccccccCCchhHHHhhhhccccCeeec---CccccccCCe-eecCCCeEEEcCCCCCC--HHHHHhhcCC--CC
Q 007115 490 KVTRVSLSYCKNYSSELFWFLILSTCQAGAQVD---DPVQEVFNGQ-EVEVWPRLTWKPKWGLT--FSEIKNKVSG--SC 561 (617)
Q Consensus 490 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~-~~~~~P~i~l~p~f~~~--~~~~~~r~~~--~~ 561 (617)
+ ||+.++ .+...+++|+ +++.+|+|.|+|+|+++ ++++++||++ ++
T Consensus 470 ~--------------------------aG~~v~~~~~~~~~~~~~~~~~~~~P~i~l~p~~~~~~~~~~~~~k~~~~~~~ 523 (630)
T 3ogz_A 470 A--------------------------IGLPLFYSSQPEVTVAKDAFGVRLFPIIVLDTVCASSGSLDDLARVFPTPEKV 523 (630)
T ss_dssp H--------------------------TTCCCCCCCSCSEEETTTTEEECCCSEEEECHHHHTTCCHHHHHHHCSSGGGE
T ss_pred H--------------------------cCceecccccchhhhhcCccccCCCCEEEEeccccccccHHHHHHHhCCCCCc
Confidence 9 899987 4666678888 89999999999999999 9999999999 78
Q ss_pred CCCCCceEEEEeceEEeeCeEEEEEEEEEcCCCCe----EEecCCeEEeCCee
Q 007115 562 SVSQKSTMVIKGRNVVLEDLSLNGALIIDSVDDAE----VCYIMPILRYGGQS 610 (617)
Q Consensus 562 ~i~~~s~L~v~g~~~~~~~v~l~G~v~I~a~~~~~----~~i~~~~~~~~~~~ 610 (617)
+|+++|+|+|+|+ ++++||.|+|+|+|.|++|++ +.+.. +|.+.|-.
T Consensus 524 ~i~~~S~L~veg~-v~~~~l~LdG~lvI~a~~~~~~~~~v~~~~-~v~n~g~~ 574 (630)
T 3ogz_A 524 HIDQHSTLIVEGR-VIIESLELYGALTIRGPTDSMALPHVVRNA-VVRNAGWS 574 (630)
T ss_dssp EECTTCEEEEESS-EEESCEEEESEEEEECCSSTTSCCEEECSE-EEECCCCE
T ss_pred eecCCcEEEEEEE-EEEEEEEEeeEEEEEcCCCCccCceEEecc-eEecCCcE
Confidence 9999999999999 999999999999999999999 88887 88887765
|
| >3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A | Back alignment and structure |
|---|
| >3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} | Back alignment and structure |
|---|
| >2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* | Back alignment and structure |
|---|
| >2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* | Back alignment and structure |
|---|
| >1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* | Back alignment and structure |
|---|
| >3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* | Back alignment and structure |
|---|
| >4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* | Back alignment and structure |
|---|
| >3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori} | Back alignment and structure |
|---|
| >1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ... | Back alignment and structure |
|---|
| >1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* | Back alignment and structure |
|---|
| >3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
| >1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A* | Back alignment and structure |
|---|
| >1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6 | Back alignment and structure |
|---|
| >3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* | Back alignment and structure |
|---|
| >2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6 | Back alignment and structure |
|---|
| >3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 | Back alignment and structure |
|---|
| >4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* | Back alignment and structure |
|---|
| >3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
| >1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* | Back alignment and structure |
|---|
| >2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* | Back alignment and structure |
|---|
| >2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A | Back alignment and structure |
|---|
| >2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A* | Back alignment and structure |
|---|
| >2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP} | Back alignment and structure |
|---|
| >1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A* | Back alignment and structure |
|---|
| >3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A* | Back alignment and structure |
|---|
| >1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A* | Back alignment and structure |
|---|
| >3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* | Back alignment and structure |
|---|
| >3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0 | Back alignment and structure |
|---|
| >1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A | Back alignment and structure |
|---|
| >1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A | Back alignment and structure |
|---|
| >2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A* | Back alignment and structure |
|---|
| >2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A* | Back alignment and structure |
|---|
| >1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A | Back alignment and structure |
|---|
| >3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
| >1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A* | Back alignment and structure |
|---|
| >1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A* | Back alignment and structure |
|---|
| >4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A | Back alignment and structure |
|---|
| >2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
| >4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae} | Back alignment and structure |
|---|
| >2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli} | Back alignment and structure |
|---|
| >2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea} | Back alignment and structure |
|---|
| >3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A* | Back alignment and structure |
|---|
| >2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A* | Back alignment and structure |
|---|
| >2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
| >1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A* | Back alignment and structure |
|---|
| >2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20 | Back alignment and structure |
|---|
| >2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* | Back alignment and structure |
|---|
| >2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 617 | ||||
| d1jv1a_ | 501 | c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphor | 1e-100 | |
| d2icya2 | 378 | c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 | 1e-57 |
| >d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Length = 501 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: UDP-N-acetylglucosamine pyrophosphorylase species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Score = 312 bits (800), Expect = e-100
Identities = 107/562 (19%), Positives = 189/562 (33%), Gaps = 83/562 (14%)
Query: 41 ELAKMLMEMGQSHLFEKWAAPGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADS 100
+L L + GQ HL W +++ ++ + ++ +N L + + A E S
Sbjct: 5 DLKLTLSKAGQEHLLRFW--NELEEAQQVELYAELQAMN---FEELNFFFQKAIEGFNQS 59
Query: 101 KAGKNPFDGFTPSVPTG-EVLKFGDDTFINYEQAGVKEAKN--AAFVLVAGGLGERLGYN 157
KN P D +E G+ + A +L+AGG G RLG
Sbjct: 60 SHQKNVDARMEPVPREVLGSATRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVA 119
Query: 158 GIKVALPAETTTGTCFLQNYIECILALQESSCRLAEGKCQEIPFAIMTSDDTHSRTQELL 217
K + Q E IL LQ+ + + G IP+ IMTS T T+E
Sbjct: 120 YPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYY-GNKCIIPWYIMTSGRTMESTKEFF 178
Query: 218 ESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYSSGL 277
+ YFG+K V +Q + + + + + K ++ P G+G ++ L + +
Sbjct: 179 TKHKYFGLKKENVIFFQQGMLPAMSFDGKIIL---EEKNKVSMAPDGNGGLYRALAAQNI 235
Query: 278 LKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPR-KAKEAIGGITRL 336
+++ G+ + + N L+ A P +G K + V + E +G + R+
Sbjct: 236 VEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV 295
Query: 337 THADGRSMVINVEYNQLDPLLRATGFPDGDVNCETGYSPFPGNINQLILELGPYMEELKK 396
DG V+ EY+++ DG + GNI + + +
Sbjct: 296 ---DGVYQVV--EYSEISLATAQKRSSDGRLLF------NAGNIANHFFTVPFLRDVVNV 344
Query: 397 TGGAIKEFVNPK---YKDASKTSFKSST----RLECMMQDYPKTLPPSAKVGFTVMDTWL 449
++ V K Y D K ++E + D + K +
Sbjct: 345 YEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFD---IFQFAKKFVVYEVLRED 401
Query: 450 AYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYCANSLILRKVTRVSLSYCKNYSSELFWF 509
++P+KN K + T+ A+ + +
Sbjct: 402 EFSPLKNADSQNGK-------DNPTTARHALMSLHHCWVLN------------------- 435
Query: 510 LILSTCQAGAQVDDPVQEVFNGQEVEVWPRLTWKPKWGLTFSEIKNKVSGSCSVSQKSTM 569
AG D E RL P+ + N V C +S +
Sbjct: 436 -------AGGHFID-----------ENGSRLPAIPR-----LKDANDVPIQCEISPLISY 472
Query: 570 VIKGRNVVLEDLSLNGALIIDS 591
+G + D + LIID
Sbjct: 473 AGEGLESYVADKEFHAPLIIDE 494
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 617 | |||
| d1jv1a_ | 501 | UDP-N-acetylglucosamine pyrophosphorylase {Human ( | 100.0 | |
| d2icya2 | 378 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 100.0 | |
| d2icya1 | 83 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 99.69 | |
| d1lvwa_ | 295 | RmlA (RfbA) {Archaeon Methanobacterium thermoautot | 98.06 | |
| d1mc3a_ | 291 | RffH {Escherichia coli [TaxId: 562]} | 98.06 | |
| d1fxoa_ | 292 | RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} | 98.05 | |
| d1yp2a2 | 307 | Glucose-1-phosphate adenylyltransferase small subu | 98.01 | |
| d1g97a2 | 250 | N-acetylglucosamine 1-phosphate uridyltransferase | 97.86 | |
| d2cu2a2 | 268 | Putative mannose-1-phosphate guanylyl transferase | 97.83 | |
| d2oi6a2 | 248 | N-acetylglucosamine 1-phosphate uridyltransferase | 97.78 | |
| d1tzfa_ | 259 | Glucose-1-phosphate cytidylyltransferase RfbF {Sal | 97.61 | |
| d1i52a_ | 225 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.56 | |
| d1w77a1 | 226 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.56 | |
| d1jyka_ | 229 | CTP:phosphocholine cytidylytransferase LicC {Strep | 97.47 | |
| d1vpaa_ | 221 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.39 | |
| d1w55a1 | 205 | IspD/IspF bifunctional enzyme, CDP-me synthase dom | 97.29 | |
| d1vgwa_ | 226 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.28 | |
| d1e5ka_ | 188 | Molybdenum cofactor biosynthesis protein MobA {Esc | 97.11 | |
| d2dpwa1 | 231 | Uncharacterized protein TTHA0179 {Thermus thermoph | 95.99 | |
| d1qwja_ | 228 | CMP acylneuraminate synthetase {Mouse (Mus musculu | 82.07 |
| >d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: UDP-N-acetylglucosamine pyrophosphorylase species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Probab=100.00 E-value=3.7e-95 Score=798.79 Aligned_cols=421 Identities=22% Similarity=0.311 Sum_probs=367.2
Q ss_pred HHHHHHHHHHCCCcccccccccCCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcc
Q 007115 39 QVELAKMLMEMGQSHLFEKWAAPGVDDNEKRAFFDQVAKLNSSYPGGLKSYIKTARELLADSKAGKNPFDGFTPSVPTGE 118 (617)
Q Consensus 39 ~~~l~~~L~~~gQ~HL~~~~~~l~~~~~e~~~L~~qL~~id~~~~~~l~~~~~~~~~~l~~s~~~~~~~~~~~p~vp~~~ 118 (617)
.++|+++|+++||+|||++|+++ +++||++|++||.++|+ +++..+++++.+.+..+....++|+.+.| +|...
T Consensus 3 ~~~l~~~L~~~gQ~HLl~~~~~l--~~~ek~~L~~qL~~id~---~~l~~~~~~a~~~~~~~~~~~~~~~~~~p-~p~~~ 76 (501)
T d1jv1a_ 3 INDLKLTLSKAGQEHLLRFWNEL--EEAQQVELYAELQAMNF---EELNFFFQKAIEGFNQSSHQKNVDARMEP-VPREV 76 (501)
T ss_dssp HHHHHHHHHHTTCGGGGTTGGGS--CHHHHHHHHHHHHTCCH---HHHHHHHHHHHHCC-----------CCBC-CCGGG
T ss_pred HHHHHHHHHHhCcHHHHhhhhhC--CHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHhhhcccccCccccccC-CChhh
Confidence 56799999999999999999996 68999999999999994 67888888887766655556677787776 35543
Q ss_pred c--ccCCChhhhHHHHHhHHhhc--ceEEEEEcCCcCCcCCccCCcccCCcccCCCcchHHHHHHHHHHHHHHhhhhccC
Q 007115 119 V--LKFGDDTFINYEQAGVKEAK--NAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQNYIECILALQESSCRLAEG 194 (617)
Q Consensus 119 ~--l~~~~~~~~~~~~~G~~~l~--kvavvlLaGGlGTRLG~~~pK~~lpv~~~~gks~lql~~~~i~~l~~~~~~~~~g 194 (617)
. .....+++.+|++.|+++|+ |||||+||||||||||+++||+++|+.+++++||||++++||+++++++.++ +|
T Consensus 77 ~~~~~~~~~~~~~~~~~G~~~i~~gkvavvllaGG~GTRLG~~~pK~~~~v~~~~~ksllql~~e~i~~l~~~a~~~-~~ 155 (501)
T d1jv1a_ 77 LGSATRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKY-YG 155 (501)
T ss_dssp EEETTTTGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHH-HS
T ss_pred hcccccChHHHHHHHHhhHHHHhcCCEEEEEECCCccccCCCCCCceeeeeccCCCCcHHHHHHHHHHHHHHHHHHh-cC
Confidence 2 23344567889999999996 8999999999999999999999999999999999999999999999988764 45
Q ss_pred CcccccEEEecCccchHHHHHHHHhCCCCCCCCCcEEEEEeCceeeEecCCCceecCCCCCCccccccCCCchhhHhhhh
Q 007115 195 KCQEIPFAIMTSDDTHSRTQELLESNSYFGMKPTQVKLLKQEKVACLDDNDARLAMDPKNKYRIQTKPHGHGDVHALLYS 274 (617)
Q Consensus 195 ~~~~iPl~IMTS~~T~~~T~~~l~~~~~FGl~~~~V~~F~Q~~~P~l~~~~g~~~l~~~~~~~i~~~P~GhGdi~~aL~~ 274 (617)
....||||||||+.||++|++||++|+|||+++++|+||+|+++||++ .+|++++ +++++++|+|+||||+|.+|++
T Consensus 156 ~~~~iPl~IMtS~~T~~~t~~~l~~~~~FGl~~~~v~~f~Q~~~P~~~-~~g~i~~--~~~~~i~~~P~GhG~i~~aL~~ 232 (501)
T d1jv1a_ 156 NKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMS-FDGKIIL--EEKNKVSMAPDGNGGLYRALAA 232 (501)
T ss_dssp SCCCCCEEEEECTTTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEE-TTSCBCE--EETTEECEEECCGGGHHHHHHH
T ss_pred CCCCceEEEECChhHhHHHHHHHHhccccCCCcCceEEEEecCcceEC-CCCCccc--CCCCcccccCCCchHHHHHHHH
Confidence 567899999999999999999999999999999999999999999995 6899999 7788999999999999999999
Q ss_pred cChhHHHHHcCceEEEEEeCCCccccccchHHHHHHhhcCCceeEEeeeCC-cccccceEEEEecCCCceeEEEEeecCC
Q 007115 275 SGLLKEWHDAGLKWVLFFQDTNGLLFKAIPASLGVSATKQYHVNSLAVPRK-AKEAIGGITRLTHADGRSMVINVEYNQL 353 (617)
Q Consensus 275 sG~ld~l~~~G~eyi~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~-~~E~vG~i~~~~~~dG~~~v~nVEYsel 353 (617)
||+|++|+++|++|+||+||||+|++++||.||||++.++++|++|||+|+ |.|++|++|.. ||++++ |||+|+
T Consensus 233 sG~ld~l~~~Gi~yi~v~~vDN~l~~~~Dp~~lG~~~~~~~~~~~kvv~k~~~~e~~G~l~~~---dg~~~v--vEysel 307 (501)
T d1jv1a_ 233 QNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV---DGVYQV--VEYSEI 307 (501)
T ss_dssp TTHHHHHHHTTCCEEEEEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE---TTEEEE--ECGGGS
T ss_pred CCcHHHHHHCCCEEEEEEecCCccccccCHHHHHHHHhcccceeEEEEEcCCCCcccceEEEE---CCeEEE--EEeccC
Confidence 999999999999999999999999999999999999999999999999985 89999999976 999988 999999
Q ss_pred CHHHhhcCCCCCCCccCCCCCCCccceeeeeeehhhhHHHHhhcCCccccccCCc---ccCCCCC----cccCcchhhhh
Q 007115 354 DPLLRATGFPDGDVNCETGYSPFPGNINQLILELGPYMEELKKTGGAIKEFVNPK---YKDASKT----SFKSSTRLECM 426 (617)
Q Consensus 354 ~~~l~~~~~~~g~l~~~~gf~~f~gNinn~~~~L~~~~~~l~~~~~~l~~~vnpk---~~d~~~~----~~~~~~kLE~~ 426 (617)
++.++....++|.+. +.+||||||||++++++++++.....||+|+|+| |.|.+++ ..++++|||+|
T Consensus 308 ~~~~~~~~~~~g~l~------f~~~Ni~~~~fsl~fl~~~~~~~~~~l~~hva~Kki~~~d~~~~~~~p~~~n~iklE~f 381 (501)
T d1jv1a_ 308 SLATAQKRSSDGRLL------FNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKF 381 (501)
T ss_dssp CHHHHHCBCTTSSBS------SCEEEEEEEEEEHHHHHHHHHTTGGGCCCEEEEECCCEECTTSCEECCSSCCEEEEECC
T ss_pred CHHHHhhccCCCccc------ccccceeheeeEHHHHHHHHHhcccCCCceEeccccCccCCCCCcccCCCCcchhHHHH
Confidence 999998888777654 3478999999999999999887667899999998 5565543 23356899999
Q ss_pred hcccccCCCCCCceeEEEecCCceeecccCCCcccccCCCCCCCCChhhHHHHHHHHHHHHHHh
Q 007115 427 MQDYPKTLPPSAKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYCANSLILRK 490 (617)
Q Consensus 427 m~D~~~~f~~~~~~g~~~V~R~~~FsPvKN~~~~~~~~~~g~~~dsp~t~~~dl~~~~~~~L~~ 490 (617)
|||++.++ .++++++|+|++||+||||+++. ...|||+||+.+++++|++||+.
T Consensus 382 ifD~~~~~---~~~~~~~V~R~~eFaPvKN~~~~-------~~~dsp~ta~~~l~~~~~~wl~~ 435 (501)
T d1jv1a_ 382 VFDIFQFA---KKFVVYEVLREDEFSPLKNADSQ-------NGKDNPTTARHALMSLHHCWVLN 435 (501)
T ss_dssp GGGGGGGC---SSEEEEEECHHHHCCBCCSCTTS-------SSSSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc---cceEEEEEchhhccccccCCCCC-------CCCCCHHHHHHHHHHHhHHHHHH
Confidence 99987765 57889999999999999999874 23799999999999999999998
|
| >d2icya1 b.81.1.4 (A:384-466) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
| >d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]} | Back information, alignment and structure |
|---|
| >d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|