Citrus Sinensis ID: 007197

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610---
MRRRVAASGPTEQMDKGAGKNHQNRLCFLVTLSAFFWILLLYFHFIVLGTNNVSESNQLETSIKNSESSFVHLTNDDHLAEPRKEATQPSTFRESTDSQFKPVNPEPTNPEPVVHESPQSQSKPINPEPIVHQSPASQPNPVIPEPISQESAGHEVKSFPFMKALETIENKSDPCGGRYIYVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYTTNQFAVDVIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDFRRGSDEESDWGSKLLFLPATKNMSMLVVESSPWGANDFAIPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINLIPRVIYADPRSKLATLKDSFDVAVQSIIDRVTRLRRLTIEGLPEYDNFVEQNGWKYALLDEGQRSVGPHEWDPFFSKPKKWR
cccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccEEEEEccccHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHcccccHHHHHHHHHccccccccccccccEEEEccccEEEEEEcccccccHHHHHHHHHHHHHHHccccccccccccEEEEEcccccccccccccccccccccccccccccccccEEcccccccccEEccccccccccccccHHHHHHHcccccccEEEEEEcccccccccHHHHHHHHHHHcccccEEEEccccccccccHHHHHHHHHccEEEEcccccccccHHHHHHHHHccEEEEEcccccccccccccccccccEEEEEEcHHHHcccccHHHHHccccHHHHHHHHHHHHHHcccEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccc
ccccccccccccHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEccccccccccccccccccccccccccccccccHHccccccccccccccEEEEEcccHHHcHHHHHHHcccccccccHHHccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccHHHccEEEEEccHcccHHHHccccccHHHHHHHHHHHHHHHccHHHHHcccccEEEEEccccccHcccccccccccHHHcccccccccEEEEEEccccccccEEEccccccccccHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHcccEccccccccccHHHHHHHHHHcccEEEEccccEEEEcccccccccccEEEEEcHHHHccccccHHHHHHcccHHHHHHHHHHHHHHcccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHcccccEcccccccccccccccccc
mrrrvaasgpteqmdkgagknhqnRLCFLVTLSAFFWILLLYFHFIVLgtnnvsesnQLETSIKnsessfvhltnddhlaeprkeatqpstfrestdsqfkpvnpeptnpepvvhespqsqskpinpepivhqspasqpnpvipepisqesaghevksfpfmKALETienksdpcggryiyvhdlpsrfnedmlkdckslSLWTNMCKYTanaglgpplantegvfsntgwyttnQFAVDVIFNNRMKQYecltndssiaaaifvpfyagfDIARYLWgynismrdaASLDLVNWltkrpewgimggkdhFLVAGRItwdfrrgsdeesdwgskllflpatknMSMLVVesspwgandfaipyptyfhpskdaevFDWQNRMRKLERKWLfsfagaprpgdplsirgQLMEQCRNSEVGkllecdfgeskchspssiMQMFQTSIfclqpqgdsytrrsafdsilagcipvffhpgsaytqytwhlpknyssysvfipeddirkRNVSIEERLKQISPEQIKEMRETVINLIprviyadprsklatlkdSFDVAVQSIIDRVTRLRRLTIeglpeydnfveqngwkyalldegqrsvgphewdpffskpkkwr
mrrrvaasgpteqmdkgagknhQNRLCFLVTLSAFFWILLLYFHFIVLGTNNVSESNQLETSIKNSESSFVHLTNDDHLAEPRKEatqpstfrestdsqfkpvnpEPTNPEPVVHESPQSQSKPINPEPIVHQSPASQPNPVIPEPISQESAGHEVKSFPFMKALETIenksdpcgGRYIYVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYTTNQFAVDVIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDFrrgsdeesdwGSKLLFLPATKNMSMLVVESSPWGANDFAIPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEerlkqispeqikEMRETVINLiprviyadprsklatlkdsfdvavqSIIDRVTRLRRLtieglpeydnfveQNGWKYALLDEGQrsvgphewdpffskpkkwr
MRRRVAASGPTEQMDKGAGKNHQNRLCFLVTLSAFFWILLLYFHFIVLGTNNVSESNQLETSIKNSESSFVHLTNDDHLAEPRKEATQPSTFRESTDSQFKpvnpeptnpepvvHESPQSQSKPINPEPIVHQSPASQPNPVIPEPISQESAGHEVKSFPFMKALETIENKSDPCGGRYIYVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYTTNQFAVDVIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDFRRGSDEESDWGSKLLFLPATKNMSMLVVESSPWGANDFAIPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINLIPRVIYADPRSKLATLKDSFDVAVQSIIDRVTRLRRLTIEGLPEYDNFVEQNGWKYALLDEGQRSVGPHEWDPFFSKPKKWR
***********************NRLCFLVTLSAFFWILLLYFHFIVLGTNN************************************************************************************************************FMKALETIENKSDPCGGRYIYVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYTTNQFAVDVIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDFRRGSDEESDWGSKLLFLPATKNMSMLVVESSPWGANDFAIPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAP*******IRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSI***********IKEMRETVINLIPRVIYADPRSKLATLKDSFDVAVQSIIDRVTRLRRLTIEGLPEYDNFVEQNGWKYALLDEGQ*******************
************************RLCFLVTLSAFFWILLLYFHFIVL*******************************************************************************************************************************GGRYIYVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYTTNQFAVDVIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDFRRGSDEESDWGSKLLFLPATKNMSMLVVESSPWGANDFAIPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINLIPRVIYADPRSKLATLKDSFDVAVQSIIDRVT***************FVEQNGWKYALLDEGQRSVGPHEWDPFFSKP****
********************NHQNRLCFLVTLSAFFWILLLYFHFIVLGTNNVSESNQLETSIKNSESSFVHLTNDDHLA*******************************************PINPEPIV********NPVIPEPISQESAGHEVKSFPFMKALETIENKSDPCGGRYIYVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYTTNQFAVDVIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDFRRGSDEESDWGSKLLFLPATKNMSMLVVESSPWGANDFAIPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINLIPRVIYADPRSKLATLKDSFDVAVQSIIDRVTRLRRLTIEGLPEYDNFVEQNGWKYALLDEGQRSVGPHEWDPFFSKPKKWR
*********************HQNRLCFLVTLSAFFWILLLYFHFIVLGTN************************************************************************************************************************SDPCGGRYIYVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYTTNQFAVDVIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDFRRGSDEESDWGSKLLFLPATKNMSMLVVESSPWGANDFAIPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINLIPRVIYADPRSKLATLKDSFDVAVQSIIDRVTRLRRLTIEGLPEYDNFVEQNGWKYALLDEGQRSVGPHEWDPFFSKP****
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRRRVAASGPTEQMDKGAGKNHQNRLCFLVTLSAFFWILLLYFHFIVLGTNNVSESNQLETSIKNSESSFVHLTNDDHLAEPRKEATQPSTFRESTDSQFKPVNPEPTNPEPVVHESPQSQSKPINPEPIVHQSPASQPNPVIPEPISQESAGHEVKSFPFMKALETIENKSDPCGGRYIYVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYTTNQFAVDVIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDFRRGSDEESDWGSKLLFLPATKNMSMLVVESSPWGANDFAIPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINLIPRVIYADPRSKLATLKDSFDVAVQSIIDRVTRLRRLTIEGLPEYDNFVEQNGWKYALLDEGQRSVGPHEWDPFFSKPKKWR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query613 2.2.26 [Sep-21-2011]
Q7XJ98619 Xyloglucan galactosyltran yes no 0.946 0.936 0.698 0.0
Q8H038588 Xyloglucan galactosyltran yes no 0.916 0.955 0.648 0.0
Q8S1X8415 Probable glucuronosyltran no no 0.517 0.763 0.211 0.0004
>sp|Q7XJ98|KATAM_ARATH Xyloglucan galactosyltransferase KATAMARI1 OS=Arabidopsis thaliana GN=KAM1 PE=1 SV=1 Back     alignment and function desciption
 Score =  896 bits (2315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/610 (69%), Positives = 491/610 (80%), Gaps = 30/610 (4%)

Query: 1   MRRRVAASGPTEQMDKGAGKNHQNRLCFLVTLSAFFWILLLYFHFIVLGTNNVSESNQLE 60
           MRRR A   PTE M+KG GKN  NR+C LV LS FFW LLLYFHF+VLGT+N+ +  QL+
Sbjct: 7   MRRRSAEVSPTEPMEKGNGKNQTNRICLLVALSLFFWALLLYFHFVVLGTSNIDKQLQLQ 66

Query: 61  TSIKNSESSFVHLTNDDHLAEPRKEATQPSTFRESTDSQFKPVNPEPTNPEPVVHESPQS 120
            S   S+ S V L  D    EP    ++P            P  P  T  +P+       
Sbjct: 67  PSYAQSQPSSVSLRVDKFPIEPHAAPSKPP-----------PKEPLVTIDKPI------- 108

Query: 121 QSKPINPEPIVHQSPASQPNPVIPEPISQESAGHEVKSFPFMKALETIENKSDPCGGRYI 180
               + P P+ + S   +P  ++     QE        F F++AL+T++NKSDPCGG+YI
Sbjct: 109 ----LPPAPVANSSSTFKPPRIVESGKKQE--------FSFIRALKTVDNKSDPCGGKYI 156

Query: 181 YVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYTTNQFAVD 240
           YVH+LPS+FNEDML+DCK LSLWTNMCK+T NAGLGPPL N EGVFS+ GWY TNQFAVD
Sbjct: 157 YVHNLPSKFNEDMLRDCKKLSLWTNMCKFTTNAGLGPPLENVEGVFSDEGWYATNQFAVD 216

Query: 241 VIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLTKRP 300
           VIF+NRMKQY+CLTNDSS+AAAIFVPFYAGFDIARYLWGYNIS RDAASL+LV+WL KRP
Sbjct: 217 VIFSNRMKQYKCLTNDSSLAAAIFVPFYAGFDIARYLWGYNISRRDAASLELVDWLMKRP 276

Query: 301 EWGIMGGKDHFLVAGRITWDFRRGSDEESDWGSKLLFLPATKNMSMLVVESSPWGANDFA 360
           EW IM GKDHFLVAGRITWDFRR S+EE+DWG+KLLFLPA KNMSMLVVESSPW ANDF 
Sbjct: 277 EWDIMRGKDHFLVAGRITWDFRRLSEEETDWGNKLLFLPAAKNMSMLVVESSPWNANDFG 336

Query: 361 IPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGK 420
           IPYPTYFHP+KD+EVF+WQ+RMR LERKWLFSFAGAPRP +P SIRGQ+++QCRNS VGK
Sbjct: 337 IPYPTYFHPAKDSEVFEWQDRMRNLERKWLFSFAGAPRPDNPKSIRGQIIDQCRNSNVGK 396

Query: 421 LLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYT 480
           LLECDFGESKCH+PSSIMQMFQ+S+FCLQPQGDSYTRRSAFDS+LAGCIPVFFHPGSAYT
Sbjct: 397 LLECDFGESKCHAPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYT 456

Query: 481 QYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINLIPRVIYADP 540
           QYTWHLPKNY++YSVFIPEDD+RKRN+SIEERL QI  +Q+K MRE VINLIPR+IYADP
Sbjct: 457 QYTWHLPKNYTTYSVFIPEDDVRKRNISIEERLLQIPAKQVKIMRENVINLIPRLIYADP 516

Query: 541 RSKLATLKDSFDVAVQSIIDRVTRLRRLTIEGLPEYDNFVEQNGWKYALLDEGQRSVGPH 600
           RS+L T KD+FDV+VQ++ID+VTRLR+  IEG  EYD FVE+N WKYALL+EGQR  G H
Sbjct: 517 RSELETQKDAFDVSVQAVIDKVTRLRKNMIEGRTEYDYFVEENSWKYALLEEGQREAGGH 576

Query: 601 EWDPFFSKPK 610
            WDPFFSKPK
Sbjct: 577 VWDPFFSKPK 586
Involved in the attachment of the Gal residue on the third xylosyl unit within the XXXG core structure of xyloglucan, the principal glycan that interlaces the cellulose microfibrils in plant cell wall. Interacts with actin and is required for the proper endomembrane organization and for the cell elongation. Not involved in the trafficking from the endoplasmic reticulum to the vacuoles.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q8H038|KATAM_ORYSJ Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1 Back     alignment and function description
>sp|Q8S1X8|GT14_ORYSJ Probable glucuronosyltransferase Os01g0926600 OS=Oryza sativa subsp. japonica GN=Os01g0926600 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query613
262070776617 xyloglucan galactosyltransferase [Eucaly 0.965 0.959 0.727 0.0
224065537585 glycosyltransferase, CAZy family GT47 [P 0.910 0.953 0.727 0.0
359480321610 PREDICTED: xyloglucan galactosyltransfer 0.946 0.950 0.713 0.0
30680972619 xyloglucan galactosyltransferase KATAMAR 0.946 0.936 0.698 0.0
110740845619 hypothetical protein [Arabidopsis thalia 0.944 0.935 0.697 0.0
449513253586 PREDICTED: xyloglucan galactosyltransfer 0.916 0.959 0.703 0.0
449468590586 PREDICTED: xyloglucan galactosyltransfer 0.916 0.959 0.703 0.0
297832632600 hypothetical protein ARALYDRAFT_480865 [ 0.924 0.945 0.703 0.0
4512698600 unknown protein [Arabidopsis thaliana] 0.924 0.945 0.700 0.0
356545902592 PREDICTED: xyloglucan galactosyltransfer 0.913 0.945 0.708 0.0
>gi|262070776|gb|ACY08857.1| xyloglucan galactosyltransferase [Eucalyptus grandis] Back     alignment and taxonomy information
 Score =  927 bits (2396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/610 (72%), Positives = 503/610 (82%), Gaps = 18/610 (2%)

Query: 1   MRRRVAASGPTEQMDKGAGKNHQNRLCFLVTLSAFFWILLLYFHFIVLGTNNVSESNQLE 60
           MRRR +AS  +EQM+KG  KN  +RLCFL TLS FFW+LLLYFHF+VLG N + ES +L+
Sbjct: 1   MRRRSSASVGSEQMEKGTAKNQHSRLCFLATLSLFFWVLLLYFHFVVLGGNPLEESAKLQ 60

Query: 61  TSIKNSESSFVHLTNDDHLAEPRKEATQPSTFRESTDSQFKPVNPEPTNPEPVVHESPQS 120
                +E +  H   DD  +EPR  AT        T+S  +     P   +P + E+P+ 
Sbjct: 61  PIAVRTEFTPSHRI-DDPSSEPRTSATP------LTESHLE----TPRVVDPPIRETPRV 109

Query: 121 QSKPINPEPIVHQSPASQPNPVIPEPISQESAGHEVKSFPFMKALETIENKSDPCGGRYI 180
              P    P V   P  +   V+           ++++FPFM+AL T ENK+DPCGGRYI
Sbjct: 110 VDPPKRETPRVVDPPKREAPKVV-------GTKSKMENFPFMRALRTTENKTDPCGGRYI 162

Query: 181 YVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYTTNQFAVD 240
           YVHDLP RFNEDMLK+C+ LSLWTNMCK+T+NAGLGPPL N EGVFSNTGWY TNQFAVD
Sbjct: 163 YVHDLPPRFNEDMLKECRKLSLWTNMCKFTSNAGLGPPLENVEGVFSNTGWYATNQFAVD 222

Query: 241 VIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLTKRP 300
           VIFNNRMKQY+CLT DSSIAAAIFVPFYAGFDIARYLWGYN S+RDAASLDLVNWL KRP
Sbjct: 223 VIFNNRMKQYDCLTRDSSIAAAIFVPFYAGFDIARYLWGYNTSVRDAASLDLVNWLAKRP 282

Query: 301 EWGIMGGKDHFLVAGRITWDFRRGSDEESDWGSKLLFLPATKNMSMLVVESSPWGANDFA 360
           EW IMGGKDHFLVAGRITWDFRR SDEE+DWG+KLLFLPA +NMSMLVVESSPW ANDF 
Sbjct: 283 EWNIMGGKDHFLVAGRITWDFRRLSDEETDWGNKLLFLPAARNMSMLVVESSPWNANDFG 342

Query: 361 IPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGK 420
           IPYPTYFHP+KDA+VF WQ+RMR LERKWLFSFAGAPRP +P SIRGQ+++QCRNS+VGK
Sbjct: 343 IPYPTYFHPAKDADVFMWQDRMRNLERKWLFSFAGAPRPDNPKSIRGQIIDQCRNSKVGK 402

Query: 421 LLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYT 480
           LLECDFGESKCHSPSSIMQMFQ+S+FCLQPQGDSYTRRSAFDS+LAGCIPVFFHPGSAYT
Sbjct: 403 LLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYT 462

Query: 481 QYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINLIPRVIYADP 540
           QYTWHLPKN++ YSVFIPEDDIRKRNVSIEERL+QI PEQ+K MRE VINLIPR+IYADP
Sbjct: 463 QYTWHLPKNFTKYSVFIPEDDIRKRNVSIEERLRQIPPEQVKIMREEVINLIPRLIYADP 522

Query: 541 RSKLATLKDSFDVAVQSIIDRVTRLRRLTIEGLPEYDNFVEQNGWKYALLDEGQRSVGPH 600
           RSKL TLKD+FDVAVQ++ID+VTRLRR  IEG  EYDNF+E+N WKYALL+EG+R VG H
Sbjct: 523 RSKLETLKDAFDVAVQAVIDKVTRLRRNIIEGRTEYDNFIEENSWKYALLEEGEREVGGH 582

Query: 601 EWDPFFSKPK 610
           EWDPFFSKPK
Sbjct: 583 EWDPFFSKPK 592

Source: Eucalyptus grandis

Species: Eucalyptus grandis

Genus: Eucalyptus

Family: Myrtaceae

Order: Myrtales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224065537|ref|XP_002301846.1| glycosyltransferase, CAZy family GT47 [Populus trichocarpa] gi|222843572|gb|EEE81119.1| glycosyltransferase, CAZy family GT47 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359480321|ref|XP_003632432.1| PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|30680972|ref|NP_179627.2| xyloglucan galactosyltransferase KATAMARI1 [Arabidopsis thaliana] gi|68052329|sp|Q7XJ98.1|KATAM_ARATH RecName: Full=Xyloglucan galactosyltransferase KATAMARI1; AltName: Full=Protein MURUS 3 gi|32329134|gb|AAO39815.1| xyloglucan galactosyltransferase [Arabidopsis thaliana] gi|71143070|gb|AAZ23926.1| At2g20370 [Arabidopsis thaliana] gi|330251905|gb|AEC06999.1| xyloglucan galactosyltransferase KATAMARI1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|110740845|dbj|BAE98519.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449513253|ref|XP_004164276.1| PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449468590|ref|XP_004152004.1| PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297832632|ref|XP_002884198.1| hypothetical protein ARALYDRAFT_480865 [Arabidopsis lyrata subsp. lyrata] gi|297330038|gb|EFH60457.1| hypothetical protein ARALYDRAFT_480865 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|4512698|gb|AAD21751.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356545902|ref|XP_003541372.1| PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query613
TAIR|locus:2039002619 MUR3 "AT2G20370" [Arabidopsis 0.804 0.796 0.758 8.8e-239
TAIR|locus:2066091720 AT2G29040 "AT2G29040" [Arabido 0.716 0.609 0.553 1e-141
TAIR|locus:2129281521 AT4G13990 "AT4G13990" [Arabido 0.722 0.850 0.508 6e-133
TAIR|locus:2046372509 AT2G32750 "AT2G32750" [Arabido 0.680 0.819 0.505 5.1e-122
TAIR|locus:2046387468 GT13 "AT2G32740" [Arabidopsis 0.655 0.858 0.480 9e-109
TAIR|locus:2045527479 AT2G31990 "AT2G31990" [Arabido 0.647 0.828 0.495 2.7e-107
TAIR|locus:2201297455 AT1G68470 "AT1G68470" [Arabido 0.632 0.852 0.432 7e-92
TAIR|locus:2031346664 RHS8 "AT1G63450" [Arabidopsis 0.626 0.578 0.402 6e-87
TAIR|locus:2167933517 GT18 "AT5G62220" [Arabidopsis 0.634 0.752 0.418 1.6e-86
TAIR|locus:2155110561 AT5G41250 "AT5G41250" [Arabido 0.623 0.680 0.402 6.9e-86
TAIR|locus:2039002 MUR3 "AT2G20370" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2090 (740.8 bits), Expect = 8.8e-239, Sum P(2) = 8.8e-239
 Identities = 380/501 (75%), Positives = 436/501 (87%)

Query:   115 HESPQSQSKPINP-----EPIVHQSPASQPNPVIPEPISQESAGHEVKSFPFMKALETIE 169
             H +P S+  P  P     +PI+  +P +  +     P   ES   + + F F++AL+T++
Sbjct:    89 HAAP-SKPPPKEPLVTIDKPILPPAPVANSSSTFKPPRIVESG--KKQEFSFIRALKTVD 145

Query:   170 NKSDPCGGRYIYVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNT 229
             NKSDPCGG+YIYVH+LPS+FNEDML+DCK LSLWTNMCK+T NAGLGPPL N EGVFS+ 
Sbjct:   146 NKSDPCGGKYIYVHNLPSKFNEDMLRDCKKLSLWTNMCKFTTNAGLGPPLENVEGVFSDE 205

Query:   230 GWYTTNQFAVDVIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAAS 289
             GWY TNQFAVDVIF+NRMKQY+CLTNDSS+AAAIFVPFYAGFDIARYLWGYNIS RDAAS
Sbjct:   206 GWYATNQFAVDVIFSNRMKQYKCLTNDSSLAAAIFVPFYAGFDIARYLWGYNISRRDAAS 265

Query:   290 LDLVNWLTKRPEWGIMGGKDHFLVAGRITWDFRRGSDEESDWGSKLLFLPATKNMSMLVV 349
             L+LV+WL KRPEW IM GKDHFLVAGRITWDFRR S+EE+DWG+KLLFLPA KNMSMLVV
Sbjct:   266 LELVDWLMKRPEWDIMRGKDHFLVAGRITWDFRRLSEEETDWGNKLLFLPAAKNMSMLVV 325

Query:   350 ESSPWGANDFAIPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQL 409
             ESSPW ANDF IPYPTYFHP+KD+EVF+WQ+RMR LERKWLFSFAGAPRP +P SIRGQ+
Sbjct:   326 ESSPWNANDFGIPYPTYFHPAKDSEVFEWQDRMRNLERKWLFSFAGAPRPDNPKSIRGQI 385

Query:   410 MEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCI 469
             ++QCRNS VGKLLECDFGESKCH+PSSIMQMFQ+S+FCLQPQGDSYTRRSAFDS+LAGCI
Sbjct:   386 IDQCRNSNVGKLLECDFGESKCHAPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCI 445

Query:   470 PVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVI 529
             PVFFHPGSAYTQYTWHLPKNY++YSVFIPEDD+RKRN+SIEERL QI  +Q+K MRE VI
Sbjct:   446 PVFFHPGSAYTQYTWHLPKNYTTYSVFIPEDDVRKRNISIEERLLQIPAKQVKIMRENVI 505

Query:   530 NLIPRVIYADPRSKLATLKDSFDVAVQSIIDRVTRLRRLTIEGLPEYDNFVEQNGWKYAL 589
             NLIPR+IYADPRS+L T KD+FDV+VQ++ID+VTRLR+  IEG  EYD FVE+N WKYAL
Sbjct:   506 NLIPRLIYADPRSELETQKDAFDVSVQAVIDKVTRLRKNMIEGRTEYDYFVEENSWKYAL 565

Query:   590 LDEGQRSVGPHEWDPFFSKPK 610
             L+EGQR  G H WDPFFSKPK
Sbjct:   566 LEEGQREAGGHVWDPFFSKPK 586
GO:0003824 "catalytic activity" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0016020 "membrane" evidence=IEA;ISS
GO:0009969 "xyloglucan biosynthetic process" evidence=IMP
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IDA
GO:0009826 "unidimensional cell growth" evidence=IMP
GO:0010256 "endomembrane system organization" evidence=IMP
GO:0030173 "integral to Golgi membrane" evidence=IDA
GO:0009863 "salicylic acid mediated signaling pathway" evidence=IMP
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
GO:0042353 "fucose biosynthetic process" evidence=IMP
TAIR|locus:2066091 AT2G29040 "AT2G29040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129281 AT4G13990 "AT4G13990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046372 AT2G32750 "AT2G32750" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046387 GT13 "AT2G32740" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045527 AT2G31990 "AT2G31990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201297 AT1G68470 "AT1G68470" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031346 RHS8 "AT1G63450" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167933 GT18 "AT5G62220" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155110 AT5G41250 "AT5G41250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8H038KATAM_ORYSJ2, ., 4, ., 1, ., -0.64820.91680.9557yesno
Q7XJ98KATAM_ARATH2, ., 4, ., 1, ., -0.69830.94610.9369yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query613
pfam03016292 pfam03016, Exostosin, Exostosin family 6e-70
pfam05104151 pfam05104, Rib_recp_KP_reg, Ribosome receptor lysi 0.004
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information 
 Score =  227 bits (581), Expect = 6e-70
 Identities = 113/359 (31%), Positives = 149/359 (41%), Gaps = 83/359 (23%)

Query: 174 PCGGRYIYVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYT 233
            C G  +YV+DLP RFN                                E V   T WY 
Sbjct: 1   SCKGLKVYVYDLPRRFNL------------------------------LEDVLPETSWYL 30

Query: 234 TNQFAVDVIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLV 293
           T+Q+A + I +  +    C T D   A   FVPFY    +       N   RD    +LV
Sbjct: 31  THQYAAESILHKSILNSRCRTLDPDEADLFFVPFYTSLSVGT-----NAVERDLLPSELV 85

Query: 294 NWLTKRPEWGIMGGKDHFLVAGRITWDFRRGSDEESDWGSKLLFLPATKNMSMLVV---- 349
            WL   P W   GG+DH +V                  GS    LPA  N ++L V    
Sbjct: 86  EWLESLPYWNRSGGRDHIIVNSH------------PFGGSAFDRLPALNNNTILAVLAGG 133

Query: 350 ---ESSPWGANDFAIPYPTYFHP-SKDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLS- 404
              E       D  +P P YFHP S D    D    M   +RK L  FAG PRP    + 
Sbjct: 134 GFSEDQFRPGFD--VPLPAYFHPNSVDDLESD---GMPPSKRKTLLFFAGGPRPAGKGAL 188

Query: 405 ---IRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAF 461
              IR  L+E+C+NS   +      G   C +P + M++ ++S FCL P GD+ T    F
Sbjct: 189 ANAIRDLLIEECKNSPDFQC----EGNQSCGNPENYMELLRSSRFCLVPPGDTPTSPRLF 244

Query: 462 DSILAGCIPVFFHPGSAYTQYTWHLPK----NYSSYSVFIPEDDIRKRNVSIEERLKQI 516
           D++ AGCIPV    G       W LP     ++S +SV +PE+DI     S+ E L+ I
Sbjct: 245 DALRAGCIPVIISDG-------WELPFEDVIDWSKFSVRVPENDI----PSLPEILRAI 292

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292
>gnl|CDD|218435 pfam05104, Rib_recp_KP_reg, Ribosome receptor lysine/proline rich region Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 613
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 100.0
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 100.0
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 99.86
KOG1022 691 consensus Acetylglucosaminyltransferase EXT2/exost 99.2
cd03814364 GT1_like_2 This family is most closely related to 95.66
cd03820348 GT1_amsD_like This family is most closely related 94.79
cd03801374 GT1_YqgM_like This family is most closely related 94.17
cd03794394 GT1_wbuB_like This family is most closely related 93.97
cd03822366 GT1_ecORF704_like This family is most closely rela 93.08
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 92.85
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 92.81
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 92.33
cd03821375 GT1_Bme6_like This family is most closely related 92.13
cd03808359 GT1_cap1E_like This family is most closely related 91.98
cd03823359 GT1_ExpE7_like This family is most closely related 91.88
cd03818396 GT1_ExpC_like This family is most closely related 91.5
cd03809365 GT1_mtfB_like This family is most closely related 91.08
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 90.91
cd03806419 GT1_ALG11_like This family is most closely related 90.87
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 90.8
cd03807365 GT1_WbnK_like This family is most closely related 90.39
cd04962371 GT1_like_5 This family is most closely related to 90.04
cd03819355 GT1_WavL_like This family is most closely related 89.71
cd03800398 GT1_Sucrose_synthase This family is most closely r 89.66
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 89.35
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 88.86
cd03798377 GT1_wlbH_like This family is most closely related 88.46
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 88.42
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 88.42
cd03811353 GT1_WabH_like This family is most closely related 88.38
cd04949372 GT1_gtfA_like This family is most closely related 87.27
cd04951360 GT1_WbdM_like This family is most closely related 86.72
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 85.36
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 84.73
cd03795357 GT1_like_4 This family is most closely related to 82.61
cd03804351 GT1_wbaZ_like This family is most closely related 82.55
TIGR02918500 accessory Sec system glycosylation protein GtfA. M 82.19
PLN02949463 transferase, transferring glycosyl groups 82.17
KOG1387465 consensus Glycosyltransferase [Cell wall/membrane/ 81.49
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 81.05
cd03816415 GT1_ALG1_like This family is most closely related 80.48
cd03802335 GT1_AviGT4_like This family is most closely relate 80.22
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information 
Probab=100.00  E-value=1.8e-68  Score=586.37  Aligned_cols=374  Identities=36%  Similarity=0.619  Sum_probs=336.0

Q ss_pred             CCCceEEecCCchhhhHHHHHhcccCC-cccc---cccccccCCCCCCCCCCCC---cccCCccccccchhhHHHHHHhh
Q 007197          175 CGGRYIYVHDLPSRFNEDMLKDCKSLS-LWTN---MCKYTANAGLGPPLANTEG---VFSNTGWYTTNQFAVDVIFNNRM  247 (613)
Q Consensus       175 c~gr~IYVYdLP~~FN~~ll~~c~~~~-~w~~---~C~~~~n~G~gp~~~~~~g---~~~~~~Wy~T~qyalE~ifherL  247 (613)
                      |.+.+||||++|+.||.++++.|.... .|..   +|.+..|+++++.+....|   .+...+|+.|+||++|.+||++|
T Consensus        70 ~~~~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~  149 (464)
T KOG1021|consen   70 CAGASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRM  149 (464)
T ss_pred             ccCcceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHH
Confidence            889999999999999999999998875 6665   9999999999998776555   35677999999999999999999


Q ss_pred             --hcCccccCCcCCceEEEEccccccchhhcccCCC----cchhhHHHHHHHHHHhcCccccccCCcCeEEEcccccccc
Q 007197          248 --KQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYN----ISMRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDF  321 (613)
Q Consensus       248 --l~S~~rT~DPeeAdlFyVP~y~~l~~~r~~~~~n----~s~rd~l~~~lv~~L~~~PyWnRsgGrDHf~V~~~~~WDf  321 (613)
                        ..++|||.||++||+||||||+++++++++..++    ...++.++..++.|+++||||||++|+|||||++|+.|++
T Consensus       150 ~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~~  229 (464)
T KOG1021|consen  150 LRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGDF  229 (464)
T ss_pred             hcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchhe
Confidence              5789999999999999999999999988754432    2345667888889999999999999999999999999998


Q ss_pred             CCCCCCCCccccccccccccccceEEEeecCCCCCCCCCCCCCCccCCCCCcccchhhhhccccCCCeeEEeccCCCCCC
Q 007197          322 RRGSDEESDWGSKLLFLPATKNMSMLVVESSPWGANDFAIPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGD  401 (613)
Q Consensus       322 rr~~d~~~dwG~~l~~lp~~~N~til~ve~~~w~~~d~~iPypt~fhP~kD~~vp~w~~~~~~~~R~~L~~FaG~~~~~~  401 (613)
                      .+.    .+|+..+..++++.|++.+..++.+|. +|+++||+..+||.+..+. .|+..++..+|++|++|+|++   .
T Consensus       230 ~~~----~~~~~~~~~i~~~~n~a~ls~~~~~~~-~dv~iP~~~~~~~~~~~~~-~~~~~~~~~~R~~L~~F~G~~---~  300 (464)
T KOG1021|consen  230 RRR----SDWGASISLIPEFCNGALLSLEFFPWN-KDVAIPYPTIPHPLSPPEN-SWQGGVPFSNRPILAFFAGAP---A  300 (464)
T ss_pred             eec----cchhhHHHHHHhhCCcceeecccccCC-CcccCCCccCcCccCcccc-ccccCCCCCCCceEEEEeccc---c
Confidence            875    478888888999999899999998887 8999999999999999888 898888889999999999996   4


Q ss_pred             ChhhHHHHHHHhhc-CCCceeeeecCCCCcCCCchhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccc
Q 007197          402 PLSIRGQLMEQCRN-SEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYT  480 (613)
Q Consensus       402 ~~~IR~~L~~~~~~-~~~~~~v~c~~g~~~c~~~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~  480 (613)
                      ++.||+.|+++|++ .+.+..++|..|..+|+++..|++.|++|+|||||+||+++++|+||||++|||||||+|+   .
T Consensus       301 ~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~---~  377 (464)
T KOG1021|consen  301 GGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDG---I  377 (464)
T ss_pred             CCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCC---c
Confidence            57899999999999 4558899999888889999999999999999999999999999999999999999999998   7


Q ss_pred             cccccCCCCCcceEEEeecchhccccccHHHHHccCCHHHHHHHHHHHhh-hcceeeeeC--CCCCcCCcCCHHHHHHHH
Q 007197          481 QYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVIN-LIPRVIYAD--PRSKLATLKDSFDVAVQS  557 (613)
Q Consensus       481 qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~sIp~e~i~~Mr~~l~~-v~~~f~Y~~--p~~~~~~~~DAFd~~l~~  557 (613)
                      ||||++++||++|||+|++++|+++   |.++|.+|+.+++.+||+++++ +.++|.+..  |...    +||||+++++
T Consensus       378 ~lpf~~~~d~~~fSV~v~~~~v~~~---~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~----~da~~~~~~~  450 (464)
T KOG1021|consen  378 QLPFGDVLDWTEFSVFVPEKDVPEL---IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKR----GDAFHMILHS  450 (464)
T ss_pred             ccCcCCCccceEEEEEEEHHHhhhH---HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCc----chhHHHHHhh
Confidence            9999999999999999999999973   5999999999999999999995 888888877  4443    8999999999


Q ss_pred             HHHHHHHhhH
Q 007197          558 IIDRVTRLRR  567 (613)
Q Consensus       558 L~~Rv~~ir~  567 (613)
                      |+.|+..++.
T Consensus       451 v~~r~~~~~~  460 (464)
T KOG1021|consen  451 LWRRLHKLRS  460 (464)
T ss_pred             hhhccccccc
Confidence            9999988764

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query613
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 53.3 bits (127), Expect = 2e-07
 Identities = 53/353 (15%), Positives = 104/353 (29%), Gaps = 117/353 (33%)

Query: 320 DFRRG--SDEESD---------WGSKLLF---LPATKNMSMLVVESS-----PWGANDFA 360
           D  +   S EE D          G+  LF   L   + M    VE        +  +   
Sbjct: 40  DMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIK 99

Query: 361 ----------IPYPTYFHP-SKDAEVFDWQN--RMRKLE--RKWLFSFAGAPRPGDPLSI 405
                       Y         D +VF   N  R++     R+ L       RP   + I
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL----RPAKNVLI 155

Query: 406 RGQLM----------EQCRNSEVGKLLEC-----DFGESKCHSPSSIMQMFQTSIFCLQP 450
            G  +          + C + +V   ++      +     C+SP ++++M Q      Q 
Sbjct: 156 DG--VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK--NCNSPETVLEMLQK--LLYQI 209

Query: 451 QGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDI-------- 502
             +  +R     +     I +  H   A  +         +   V     ++        
Sbjct: 210 DPNWTSRSDHSSN-----IKLRIHSIQAELRRLLKSKPYENCLLVL---LNVQNAKAWNA 261

Query: 503 -----------RKRNV------------SIEERLKQISPEQIKEMRETVINL----IPR- 534
                      R + V            S++     ++P+++K +    ++     +PR 
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321

Query: 535 ----------VIYADPRSKLATLKDSFDVAVQSIIDRVTRLRRLTIEGLPEYD 577
                     +I    R  LAT  D++        D++T +   ++  L   +
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATW-DNWK---HVNCDKLTTIIESSLNVLEPAE 370
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query613
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 97.13
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 94.63
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 93.74
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 93.36
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 92.77
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 91.69
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 91.46
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 91.2
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 90.85
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 89.24
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 88.3
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 85.74
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 85.62
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 85.25
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 84.91
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 84.7
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 84.58
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
Probab=97.13  E-value=0.0034  Score=56.73  Aligned_cols=132  Identities=11%  Similarity=0.160  Sum_probs=76.5

Q ss_pred             CCeeEEeccCCCCCCChhhHHHHHHHhhcCCCceeeeecCCCCcCCCchhHHhhcccCeEEEccCCCCCCcchHHHHHhh
Q 007197          387 RKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILA  466 (613)
Q Consensus       387 R~~L~~FaG~~~~~~~~~IR~~L~~~~~~~~~~~~v~c~~g~~~c~~~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~a  466 (613)
                      .++-+.+.|.-      ..++.+.+..+..+.  .+.  +|.   ....+..+.|+.+.+++.|.-.......++|||.+
T Consensus        31 ~~~~l~i~G~g------~~~~~~~~~~~~~~~--~v~--~g~---~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~   97 (166)
T 3qhp_A           31 QDIVLLLKGKG------PDEKKIKLLAQKLGV--KAE--FGF---VNSNELLEILKTCTLYVHAANVESEAIACLEAISV   97 (166)
T ss_dssp             GGEEEEEECCS------TTHHHHHHHHHHHTC--EEE--CCC---CCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT
T ss_pred             CCeEEEEEeCC------ccHHHHHHHHHHcCC--eEE--Eee---cCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc
Confidence            36777888842      234444444443322  111  121   12467889999999999997554445569999999


Q ss_pred             CceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHccCCHHHHHHHHHHHhhhcceeeeeC
Q 007197          467 GCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINLIPRVIYAD  539 (613)
Q Consensus       467 GCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~sIp~e~i~~Mr~~l~~v~~~f~Y~~  539 (613)
                      ||||||..+.....   -++ +.-..+  .++..+...-.-.|..++.  .++...+|.++.++...+|.|..
T Consensus        98 G~vPvi~~~~~~~~---~~~-~~~~~~--~~~~~~~~~l~~~i~~l~~--~~~~~~~~~~~~~~~~~~~s~~~  162 (166)
T 3qhp_A           98 GIVPVIANSPLSAT---RQF-ALDERS--LFEPNNAKDLSAKIDWWLE--NKLERERMQNEYAKSALNYTLEN  162 (166)
T ss_dssp             TCCEEEECCTTCGG---GGG-CSSGGG--EECTTCHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHC---
T ss_pred             CCCcEEeeCCCCch---hhh-ccCCce--EEcCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHCChhh
Confidence            99999994431110   112 222333  4444444320002444444  68888999999888777777743
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query613
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 95.06
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 88.73
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 87.94
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 86.95
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=95.06  E-value=0.05  Score=54.98  Aligned_cols=83  Identities=14%  Similarity=0.237  Sum_probs=56.5

Q ss_pred             cCCCeeEEeccCCCCCCChhhHHHHHHHhhcCCCceeeeecCCCCcCC-----CchhHHhhcccCeEEEccC---CCCCC
Q 007197          385 LERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKCH-----SPSSIMQMFQTSIFCLQPQ---GDSYT  456 (613)
Q Consensus       385 ~~R~~L~~FaG~~~~~~~~~IR~~L~~~~~~~~~~~~v~c~~g~~~c~-----~~~~y~~~m~~SkFCL~P~---GDs~t  456 (613)
                      ..|+.+.+|.-+-   ....+|..+++++....   .+++.   +.|.     ...+-.+.|.+.+|+||.-   -.++.
T Consensus       177 ~~K~kFcs~v~Sn---~~~~~R~~~~~~L~k~~---~Vd~~---G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~Yv  247 (349)
T d2nzwa1         177 PLKRGFASFVASN---PNAPIRNAFYDALNSIE---PVTGG---GSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYV  247 (349)
T ss_dssp             TTSSEEEEECCSC---CCCHHHHHHHHHHTTTS---CCEEC---SSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCC
T ss_pred             cccCceEEEEEcC---CCCchHHHHHHHHhccC---eeccc---CccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCc
Confidence            4566666665321   12468999999987764   23331   2231     2235567899999999974   33455


Q ss_pred             cchHHHHHhhCceeEEecCC
Q 007197          457 RRSAFDSILAGCIPVFFHPG  476 (613)
Q Consensus       457 srRlfDAI~aGCIPVIisD~  476 (613)
                      +-.++||+++|||||..++.
T Consensus       248 TEKi~da~~~g~iPIy~G~~  267 (349)
T d2nzwa1         248 TEKIIDAYFSHTIPIYWGSP  267 (349)
T ss_dssp             CTHHHHHHHTTCEEEEESCT
T ss_pred             chHHHHHHhCCeEEEEECCC
Confidence            66699999999999999975
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure