Citrus Sinensis ID: 007212
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 612 | 2.2.26 [Sep-21-2011] | |||||||
| Q43784 | 608 | Granule-bound starch synt | N/A | no | 0.985 | 0.991 | 0.724 | 0.0 | |
| O82627 | 608 | Granule-bound starch synt | N/A | no | 0.988 | 0.995 | 0.718 | 0.0 | |
| Q00775 | 607 | Granule-bound starch synt | N/A | no | 0.988 | 0.996 | 0.714 | 0.0 | |
| Q42857 | 608 | Granule-bound starch synt | N/A | no | 0.986 | 0.993 | 0.712 | 0.0 | |
| Q9MAQ0 | 610 | Probable granule-bound st | yes | no | 0.991 | 0.995 | 0.687 | 0.0 | |
| Q43092 | 603 | Granule-bound starch synt | N/A | no | 0.915 | 0.928 | 0.722 | 0.0 | |
| Q8LL05 | 565 | Granule-bound starch synt | N/A | no | 0.905 | 0.980 | 0.707 | 0.0 | |
| P09842 | 603 | Granule-bound starch synt | N/A | no | 0.946 | 0.960 | 0.658 | 0.0 | |
| Q0DEV5 | 609 | Granule-bound starch synt | no | no | 0.923 | 0.927 | 0.675 | 0.0 | |
| A2Y8X2 | 609 | Granule-bound starch synt | N/A | no | 0.923 | 0.927 | 0.675 | 0.0 |
| >sp|Q43784|SSG1_MANES Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/617 (72%), Positives = 514/617 (83%), Gaps = 14/617 (2%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF-----RCMKHSGLRSLNIIDDLQVKTMA 55
MAT +AA FVSRS H L +KA+ + + + +GLRSLN +D LQ+KT
Sbjct: 1 MATVIAAH-FVSRS-SHLSIHALETKANNLSHTGPWTQTITPNGLRSLNTMDKLQMKTQ- 57
Query: 56 SKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALA 115
SK A NG P+ I+CG G+N++FVG EV PWSKTGGLGDVLGGLPPA+A
Sbjct: 58 SKAVKKVSATGNG-----RPAAKIICGHGMNLIFVGAEVGPWSKTGGLGDVLGGLPPAMA 112
Query: 116 ANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAK 175
A GHRVMT++PRYDQYKDAWDT V +E+K+GD+IE VRFFH +KRGVDRVFVDHP FL K
Sbjct: 113 ARGHRVMTVSPRYDQYKDAWDTSVSVEIKIGDRIETVRFFHSYKRGVDRVFVDHPMFLEK 172
Query: 176 VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVA 235
VWGKT SKIYGPR G DYQDNQLRFSLLC AALEAPR+LNLNS+K FSGPYG++ V F+A
Sbjct: 173 VWGKTGSKIYGPRAGLDYQDNQLRFSLLCLAALEAPRVLNLNSSKNFSGPYGEE-VAFIA 231
Query: 236 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 295
NDWHT+L+PCYLK +Y+P G+YK AKV FCIHNIAYQGRFAF DF LNLP +FKSSFDF
Sbjct: 232 NDWHTALLPCYLKAIYQPMGIYKHAKVAFCIHNIAYQGRFAFSDFPRLNLPDKFKSSFDF 291
Query: 296 IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIV 355
IDGY KPV+GRKINWMKAGILESD VLTVSP+YAQE++SG ++GVELDN IRKTGI GI+
Sbjct: 292 IDGYEKPVKGRKINWMKAGILESDRVLTVSPYYAQEVISGVERGVELDNFIRKTGIAGII 351
Query: 356 NGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQ 415
NGMDVQEWNP+TDKYI + YDA+TVMDAKPLLKEALQAEVGLPVDRN+P+IGFIGRLEEQ
Sbjct: 352 NGMDVQEWNPVTDKYIDIHYDATTVMDAKPLLKEALQAEVGLPVDRNVPLIGFIGRLEEQ 411
Query: 416 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475
KGSDI AAI ++ NVQI++LGTGKK EKQ+E LE+LYP+KARGVAKFN+PLAHMI
Sbjct: 412 KGSDIFVAAISQLVEHNVQIVILGTGKKKFEKQIEHLEVLYPDKARGVAKFNVPLAHMIT 471
Query: 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 535
AGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EG+TGFQMG+ V+C+ +
Sbjct: 472 AGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGYTGFQMGALHVECDKI 531
Query: 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPG 595
D DVAA+ TV RAL TY T AL EM+ N MAQDLSWKGPA+ WE+ LL+LEV GSEPG
Sbjct: 532 DSADVAAIVKTVARALGTYATAALREMILNCMAQDLSWKGPARMWEKMLLDLEVTGSEPG 591
Query: 596 IDGEEIAPLAKENVATP 612
+GEEIAPLAKENV TP
Sbjct: 592 TEGEEIAPLAKENVPTP 608
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Responsible for the synthesis of amylose in reserve starch. Manihot esculenta (taxid: 3983) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 4EC: 2 |
| >sp|O82627|SSG1_ANTMA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1 | Back alignment and function description |
|---|
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/615 (71%), Positives = 510/615 (82%), Gaps = 10/615 (1%)
Query: 1 MATAVAASSFVSRSYGHEVAS-GLNSKASQMKFRCMK--HSGLRSLNIIDDLQVKTMASK 57
MAT V AS VS +G +S + +Q+ R + H+GLRS+N++D LQ++ A +
Sbjct: 1 MAT-VTASQLVSHVHGGATSSPDTKTNLAQVGLRNQQFTHNGLRSINMVDKLQMRNNAKQ 59
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN 117
+ + NG P I+CG G+N++FV EV PWSKTGGLGDV+GGLPPA+A N
Sbjct: 60 SRSLVKKTDNG-----SPLGKIICGTGMNLVFVLAEVGPWSKTGGLGDVVGGLPPAMAGN 114
Query: 118 GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
GHRVMT++PRYDQYKDAWDT VV+E+KVGD IE VRFFHC+KRGVDRVFVDHP FL KVW
Sbjct: 115 GHRVMTVSPRYDQYKDAWDTSVVVEIKVGDSIETVRFFHCYKRGVDRVFVDHPIFLEKVW 174
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAND 237
GKT+SKIYGP G DYQDNQLRFSLLCQAALEAPR+LNL S+KYFSGPYG+ +VVFVAND
Sbjct: 175 GKTKSKIYGPNAGTDYQDNQLRFSLLCQAALEAPRVLNLTSSKYFSGPYGE-DVVFVAND 233
Query: 238 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 297
WHT+L+PCYLK+MY+ KGMY AKV FCIHNIAYQGRF DF LLNLP QFKSSFDF D
Sbjct: 234 WHTALLPCYLKSMYQSKGMYLHAKVAFCIHNIAYQGRFGSSDFCLLNLPDQFKSSFDFFD 293
Query: 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 357
GY KPV+GRKINWMKAGILESD V+TVSP+YA ELVSG +KGVELDN+I KT I GIVNG
Sbjct: 294 GYEKPVKGRKINWMKAGILESDRVVTVSPYYAMELVSGAEKGVELDNVIAKTSITGIVNG 353
Query: 358 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 417
MD QEWNP TDK+I YD +TVMDAKPLLKEALQA VGLPVD+NIPVIGFIGRLEEQKG
Sbjct: 354 MDTQEWNPATDKHIDTNYDITTVMDAKPLLKEALQAAVGLPVDKNIPVIGFIGRLEEQKG 413
Query: 418 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477
SDIL AAI F+ +VQII+LGTGKK E+Q+++LE+LYP+KARGVAKFN+PLAHMI AG
Sbjct: 414 SDILVAAISKFVGLDVQIIILGTGKKKFEQQIQELEVLYPDKARGVAKFNVPLAHMITAG 473
Query: 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537
ADF+L+PSRFEPCGLIQLHAMRYGT+PI ASTGGLVDTV EGFTGF MG+F+V+C VDP
Sbjct: 474 ADFMLVPSRFEPCGLIQLHAMRYGTIPICASTGGLVDTVTEGFTGFHMGAFNVECATVDP 533
Query: 538 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 597
DV ++TTV RALA YG+ A EM++N MAQDLSWKGPAK WE+ LL+L V+GSEPG+D
Sbjct: 534 ADVQKIATTVERALAAYGSVAYKEMIQNCMAQDLSWKGPAKNWEKMLLSLGVSGSEPGVD 593
Query: 598 GEEIAPLAKENVATP 612
GEEIAPLAKENVATP
Sbjct: 594 GEEIAPLAKENVATP 608
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Antirrhinum majus (taxid: 4151) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|Q00775|SSG1_SOLTU Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/614 (71%), Positives = 511/614 (83%), Gaps = 9/614 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTMASKL 58
MA+ A+ FVSRS + + S SQ+ R + H+GLR++N +D LQ +T
Sbjct: 1 MASITASHHFVSRS---QTSLDTKSTLSQIGLRNHTLTHNGLRAVNKLDGLQSRTNTK-- 55
Query: 59 ATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG 118
T + A R + + G S IVCG G+N++FVGTEV PWSKTGGLGDVLGGLPPALAA G
Sbjct: 56 VTPKMASRTETK-RPGCSATIVCGKGMNLIFVGTEVGPWSKTGGLGDVLGGLPPALAARG 114
Query: 119 HRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG 178
HRVMTI+PRYDQYKDAWDT V +E+KVGD IE VRFFHC+KRGVDRVFVDHP FL KVWG
Sbjct: 115 HRVMTISPRYDQYKDAWDTSVAVEVKVGDSIEIVRFFHCYKRGVDRVFVDHPMFLEKVWG 174
Query: 179 KTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDW 238
KT SKIYGP+ G DY DN+LRFSLLCQAALEAP++LNLNS+ YFSGPYG+ +V+F+ANDW
Sbjct: 175 KTGSKIYGPKAGLDYLDNELRFSLLCQAALEAPKVLNLNSSNYFSGPYGE-DVLFIANDW 233
Query: 239 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 298
HT+LIPCYLK+MY+ +G+Y +AKV FCIHNIAYQGRF+F DF LLNLP +F+ SFDFIDG
Sbjct: 234 HTALIPCYLKSMYQSRGIYLNAKVAFCIHNIAYQGRFSFSDFPLLNLPDEFRGSFDFIDG 293
Query: 299 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 358
Y KPV+GRKINWMKAGILES V+TVSP+YAQELVS DKGVELD+++RKT I GIVNGM
Sbjct: 294 YEKPVKGRKINWMKAGILESHRVVTVSPYYAQELVSAVDKGVELDSVLRKTCITGIVNGM 353
Query: 359 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 418
D QEWNP TDKY VKYD +TVMDAKPLLKEALQA VGLPVD+ IP+IGFIGRLEEQKGS
Sbjct: 354 DTQEWNPATDKYTDVKYDITTVMDAKPLLKEALQAAVGLPVDKKIPLIGFIGRLEEQKGS 413
Query: 419 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478
DIL AAI FI +VQI+VLGTGKK E+++EQLE+LYP KA+GVAKFN+PLAHMI AGA
Sbjct: 414 DILVAAIHKFIGLDVQIVVLGTGKKEFEQEIEQLEVLYPNKAKGVAKFNVPLAHMITAGA 473
Query: 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 538
DF+L+PSRFEPCGLIQLHAMRYGTVPI ASTGGLVDTV+EG+TGF MG+F+V+C+ VDP
Sbjct: 474 DFMLVPSRFEPCGLIQLHAMRYGTVPICASTGGLVDTVKEGYTGFHMGAFNVECDVVDPA 533
Query: 539 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDG 598
DV + TTV RALA YGT A AEM+KN M+++LSWK PAKKWE LL L +GSEPG++G
Sbjct: 534 DVLKIVTTVARALAVYGTLAFAEMIKNCMSEELSWKEPAKKWETLLLGLGASGSEPGVEG 593
Query: 599 EEIAPLAKENVATP 612
EEIAPLAKENVATP
Sbjct: 594 EEIAPLAKENVATP 607
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Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q42857|SSG1_IPOBA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2 | Back alignment and function description |
|---|
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/616 (71%), Positives = 504/616 (81%), Gaps = 12/616 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTMASKL 58
MAT + AS FVS G + Q+ R + H+GLR +N ID LQ++T A K
Sbjct: 1 MAT-ITASHFVSHVCGGATSGESKVGLGQLALRSQAVTHNGLRPVNKIDMLQLRTSAKK- 58
Query: 59 ATSRQAGRNGFRSQNGPSL-MIVCGV-GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
+NG ++ G + IVC G+N++FVG EV PW KTGGLGDVLGGLPPALAA
Sbjct: 59 -----PSKNGRENEGGMAAGTIVCKQQGMNLVFVGCEVGPWCKTGGLGDVLGGLPPALAA 113
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT VV+EL+VGD+IE VRFFH +KRGVDRVFVDHP FL KV
Sbjct: 114 RGHRVMTVCPRYDQYKDAWDTCVVVELQVGDRIEPVRFFHSYKRGVDRVFVDHPMFLEKV 173
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAN 236
WGKT S +YGP+ G+DY+DNQLRFSLLCQAALEAPR+LNLNS+ YFSGPYG+ +VVFVAN
Sbjct: 174 WGKTGSMLYGPKAGKDYKDNQLRFSLLCQAALEAPRVLNLNSSNYFSGPYGE-DVVFVAN 232
Query: 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 296
DWHT+L+PCYLKTMY+ +G+Y +AKV FCIHNIAYQGRFAF DF LLNLP ++K SFDFI
Sbjct: 233 DWHTALLPCYLKTMYQSRGIYMNAKVAFCIHNIAYQGRFAFSDFSLLNLPDEYKGSFDFI 292
Query: 297 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356
DGY+KPV+GRKINWMKAGI E+D V TVSP+YA+ELVS KGVELDN IR GI GI N
Sbjct: 293 DGYDKPVKGRKINWMKAGIREADRVFTVSPNYAKELVSCVSKGVELDNHIRDCGITGICN 352
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 416
GMD QEWNP TDKY+ VKYD +TVM AKPLLKEALQA VGLPVDRNIP+IGFIGRLEEQK
Sbjct: 353 GMDTQEWNPATDKYLAVKYDITTVMQAKPLLKEALQAAVGLPVDRNIPLIGFIGRLEEQK 412
Query: 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476
GSDIL AAI FI +VQI++LGTGKK E+Q+EQLE++YP+KARGVAKFN+PLAHMI A
Sbjct: 413 GSDILYAAISKFISMDVQILILGTGKKKFEQQIEQLEVMYPDKARGVAKFNVPLAHMITA 472
Query: 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536
GADF+LIPSRFEPCGLIQLHAMRYGT I ASTGGLVDTV+EG+TGF MG+F+VDCE VD
Sbjct: 473 GADFMLIPSRFEPCGLIQLHAMRYGTPCICASTGGLVDTVKEGYTGFHMGAFNVDCETVD 532
Query: 537 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGI 596
P DV V TTV RALA YGT A EM+KN M+Q+LSWKGPAK WE LL+L VAGSEPG+
Sbjct: 533 PEDVLKVITTVGRALAMYGTLAFTEMIKNCMSQELSWKGPAKNWETVLLSLGVAGSEPGV 592
Query: 597 DGEEIAPLAKENVATP 612
+G+EIAPLAKENVATP
Sbjct: 593 EGDEIAPLAKENVATP 608
|
Required for the synthesis of amylose. Ipomoea batatas (taxid: 4120) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q9MAQ0|SSG1_ARATH Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1 | Back alignment and function description |
|---|
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/615 (68%), Positives = 502/615 (81%), Gaps = 8/615 (1%)
Query: 1 MATAVAASSFVSRSY---GHEVASGLNSKASQMKFRCMKHSGLRSLNIIDDLQVKTMASK 57
MAT A+S+FVSR+ H +S + +K + + H GLRS N++D+LQ ++ A
Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQAKP 60
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN 117
++ + ++ IVC G++++F+G EV PWSKTGGLGDVLGGLPPALAA
Sbjct: 61 VSAKSSKRSSKVKTAG----KIVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAAR 116
Query: 118 GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
GHRVMTI PRYDQYKDAWDT VV+++KVGDK+E VRFFHC+KRGVDRVFVDHP FLAKV
Sbjct: 117 GHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVV 176
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAND 237
GKT SKIYGP TG DY DNQLRFSLLCQAALEAP++LNLNS+KYFSGPYG+ +VVFVAND
Sbjct: 177 GKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGE-DVVFVAND 235
Query: 238 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 297
WHT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+D
Sbjct: 236 WHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMD 295
Query: 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 357
GY KPV+GRKINWMKA ILE+ VLTVSP+YAQEL+SG D+GVEL +R + GI+NG
Sbjct: 296 GYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIING 355
Query: 358 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 417
MDVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKG
Sbjct: 356 MDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKG 415
Query: 418 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477
SDIL AI F+ NVQ+++LGTGKK ME Q+ +LE +P KA GVAKFN+PLAHMI AG
Sbjct: 416 SDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAG 475
Query: 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537
ADFI++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP
Sbjct: 476 ADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDP 535
Query: 538 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 597
DV A + V RA+A YGT A+ EM+KN M QD SWKGPA+ WE+ LL+L VAGSE G +
Sbjct: 536 DDVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTE 595
Query: 598 GEEIAPLAKENVATP 612
GEEIAPLAKENVATP
Sbjct: 596 GEEIAPLAKENVATP 610
|
Required for the synthesis of amylose in endosperm. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q43092|SSG1_PEA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/574 (72%), Positives = 481/574 (83%), Gaps = 14/574 (2%)
Query: 39 GLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWS 98
GLRSLN L V+T + +S + ++ + IVCG+ L +FVG EV PWS
Sbjct: 44 GLRSLN---KLHVRTARATSGSSDTSEKSLGK--------IVCGMSL--VFVGAEVGPWS 90
Query: 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCH 158
KTGGLGDVLGGLPP LA NGHRVMT++PRYDQYKDAWDT+V++E+KVGDKIE VRFFHC+
Sbjct: 91 KTGGLGDVLGGLPPVLAGNGHRVMTVSPRYDQYKDAWDTNVLVEVKVGDKIETVRFFHCY 150
Query: 159 KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNS 218
KRGVDRVFVDHP FL +VWGKT SK+YGP+TG DY+DNQLRFSLLCQAALEAPR+LNLNS
Sbjct: 151 KRGVDRVFVDHPLFLERVWGKTGSKLYGPKTGIDYRDNQLRFSLLCQAALEAPRVLNLNS 210
Query: 219 NKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFE 278
+KYFSGPYG+ +V+FVANDWH++LIPCYLK+MYK +G+YK+AKV FCIHNIAYQGR AF
Sbjct: 211 SKYFSGPYGE-DVIFVANDWHSALIPCYLKSMYKSRGLYKNAKVAFCIHNIAYQGRNAFS 269
Query: 279 DFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK 338
DF LLNLP +F+SSFDFIDGYNKP G+KINWMKAGILESD V TVSPHYA+EL+SGED+
Sbjct: 270 DFSLLNLPDEFRSSFDFIDGYNKPCEGKKINWMKAGILESDQVFTVSPHYAKELISGEDR 329
Query: 339 GVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398
GVELDNIIR TGI GIVNGMD +EW+P TD+YI V Y+ +TV +AKPLLK LQAE+GLP
Sbjct: 330 GVELDNIIRSTGIIGIVNGMDNREWSPQTDRYIDVHYNETTVTEAKPLLKGTLQAEIGLP 389
Query: 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE 458
VD +IP+IGFIGRLEEQKGSDIL AI F ENVQI+VLGTGKK MEKQ+E LE YP
Sbjct: 390 VDSSIPLIGFIGRLEEQKGSDILVEAIAKFADENVQIVVLGTGKKIMEKQIEVLEEKYPG 449
Query: 459 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 518
KA G+ KFN PLAH IIAGADFI+IPSRFEPCGL+QLHAM YGTVPIV+STGGLVDTV+E
Sbjct: 450 KAIGITKFNSPLAHKIIAGADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVKE 509
Query: 519 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAK 578
G+TGF G F V+CE VDP DV ++ TV+RAL TYGTQA+ +++ N MAQ+ SWK PAK
Sbjct: 510 GYTGFHAGPFDVECEDVDPDDVDKLAATVKRALKTYGTQAMKQIILNCMAQNFSWKKPAK 569
Query: 579 KWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 612
WE+ LLNLEV G+ GIDG+EIAPLAKENVATP
Sbjct: 570 LWEKALLNLEVTGNVAGIDGDEIAPLAKENVATP 603
|
May be responsible for the synthesis of amylose. Pisum sativum (taxid: 3888) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q8LL05|SSG1B_HORVU Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1 | Back alignment and function description |
|---|
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/560 (70%), Positives = 459/560 (81%), Gaps = 6/560 (1%)
Query: 54 MASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
+A + AT+ + RN R+ S IVC G+ I+FV TEV PW KTGGLGDV+GGLPPA
Sbjct: 11 LAKRRATNYETHRNSSRT----SSPIVCSTGMPIIFVATEVHPWCKTGGLGDVVGGLPPA 66
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
LAA GHRVMTIAPRYDQYKD WDT+V++E+ VGD+ E VRFFHC+KRGVDRVFVDHP FL
Sbjct: 67 LAAMGHRVMTIAPRYDQYKDTWDTNVLVEVIVGDRTETVRFFHCYKRGVDRVFVDHPMFL 126
Query: 174 AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVF 233
KVWGKT SK+YGP TG D++DNQLRF LLC AALEAPR+LNLN+++YFSGPYG+ NVVF
Sbjct: 127 EKVWGKTGSKLYGPTTGTDFRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGE-NVVF 185
Query: 234 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSF 293
VANDWHT+++PCYLK+MYK G+Y++AKV FCIHNIAYQGRF DF LLNLP F SF
Sbjct: 186 VANDWHTAVLPCYLKSMYKQNGIYENAKVAFCIHNIAYQGRFPRADFELLNLPESFMPSF 245
Query: 294 DFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK- 352
DF+DG+ KPV GRKINWMKAGI E D+VLTVSPHY +EL SG +KGVELD ++R ++
Sbjct: 246 DFVDGHVKPVVGRKINWMKAGITECDVVLTVSPHYVKELTSGPEKGVELDGVLRTKPLET 305
Query: 353 GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL 412
GIVNGMDV +WNP TDKYI VKY+A+TV A+ L KE LQAEVGL VD +IPVI FIGRL
Sbjct: 306 GIVNGMDVIDWNPATDKYISVKYNATTVAQARALNKEILQAEVGLSVDSSIPVIVFIGRL 365
Query: 413 EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 472
EEQKGSDIL AA P F++ENVQIIVLGTGKK ME++L LE+ YP+ ARG+AKFN+PLAH
Sbjct: 366 EEQKGSDILIAASPEFVEENVQIIVLGTGKKKMEEELMLLEVKYPQNARGIAKFNVPLAH 425
Query: 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDC 532
M+ AGADFI+IPSRFEPCGLIQL M YG VPI +STGGLVDTV EG TGF MGSF+V+
Sbjct: 426 MMFAGADFIIIPSRFEPCGLIQLQGMSYGVVPICSSTGGLVDTVREGVTGFHMGSFNVEF 485
Query: 533 EAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 592
E VDP DVAAV + V RAL Y T M++N MAQDLSWKGPAKKWEE LL+L V GS
Sbjct: 486 ETVDPTDVAAVGSNVTRALKQYRTPVFHAMVQNCMAQDLSWKGPAKKWEEALLSLGVEGS 545
Query: 593 EPGIDGEEIAPLAKENVATP 612
+PGI+GEEIAPLAK+NVATP
Sbjct: 546 QPGIEGEEIAPLAKQNVATP 565
|
Involved in the synthesis of amylose in endosperm. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|P09842|SSG1_HORVU Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/586 (65%), Positives = 462/586 (78%), Gaps = 7/586 (1%)
Query: 31 KFRCMKHSGLRSLNIIDD-LQVKTMASKLA--TSRQAGRNGFRSQNGPSLMIVCGVGLNI 87
+FR GLR N D L ++T+ + A SR+A R R + ++ G G+N+
Sbjct: 21 RFRRPGFQGLRPRNPADAALGMRTIGASAAPKQSRKAHRGSRRCLS--VVVSATGSGMNL 78
Query: 88 LFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGD 147
+FVG E+APWSKTGGLGDVLGGLPPA+AANGHRVM ++PRYDQYKDAWDT V+ E+KV D
Sbjct: 79 VFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVISEIKVAD 138
Query: 148 KIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAA 207
+ E+VRFFHC+KRGVDRVF+DHPWFL KV GKT+ KIYGP G DY+DNQ RFSLLCQAA
Sbjct: 139 EYERVRFFHCYKRGVDRVFIDHPWFLEKVRGKTKEKIYGPDAGTDYEDNQQRFSLLCQAA 198
Query: 208 LEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIH 267
LEAPRILNLN+N YFSGPYG+ +VVFV NDWHT L+ CYLK+ Y+ G+Y++AKV FCIH
Sbjct: 199 LEAPRILNLNNNPYFSGPYGE-DVVFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAFCIH 257
Query: 268 NIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 327
NI+YQGRF+F+DF LNLP +FKSSFDFIDGY+KPV GRKINWMKAGIL++D VLTVSP+
Sbjct: 258 NISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQADKVLTVSPY 317
Query: 328 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387
YA+EL+SGE +G ELDNI+R TGI GIVNGMDV EW+P DK++ V YD +T ++AK L
Sbjct: 318 YAEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPTKDKFLAVNYDITTALEAKALN 377
Query: 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPME 446
KEALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP +K E+VQII+LGTGKK E
Sbjct: 378 KEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQIILLGTGKKKFE 437
Query: 447 KQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV 506
K L+ +E +P K R V +FN PLAH ++AGAD + + SRFEPCGLIQL MRYGT +
Sbjct: 438 KLLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPCGLIQLQGMRYGTPCVC 497
Query: 507 ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG 566
ASTGGLVDT+ EG TGF MG SVDC V+P DV V+TT++RA+ GT A EM+KN
Sbjct: 498 ASTGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRAVKVVGTPAYQEMVKNC 557
Query: 567 MAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 612
M QDLSWKGPAK WE+ LL L V GSEPGI GEEIAPLA ENVA P
Sbjct: 558 MIQDLSWKGPAKNWEDVLLELGVEGSEPGIVGEEIAPLAMENVAAP 603
|
Required for the synthesis of amylose in endosperm. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q0DEV5|SSG1_ORYSJ Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/567 (67%), Positives = 449/567 (79%), Gaps = 2/567 (0%)
Query: 47 DDLQVKTMASKLATSRQAGRNGFRSQNGPSLMI-VCGVGLNILFVGTEVAPWSKTGGLGD 105
D + S AT +Q S+ PS+++ G G+N++FVG E+APWSKTGGLGD
Sbjct: 44 DATSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGD 103
Query: 106 VLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165
VLGGLPPA+AANGHRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRV
Sbjct: 104 VLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRV 163
Query: 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGP 225
F+DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G
Sbjct: 164 FIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGT 223
Query: 226 YGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNL 285
YG+ +VVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL
Sbjct: 224 YGE-DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNL 282
Query: 286 PAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI 345
+F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI
Sbjct: 283 SERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNI 342
Query: 346 IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405
+R TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+
Sbjct: 343 MRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPL 402
Query: 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465
I FIGRLEEQKG D++AAAIP ++E+VQI++LGTGKK EK L+ +E YP K R V K
Sbjct: 403 IAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVK 462
Query: 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 525
FN PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF M
Sbjct: 463 FNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHM 522
Query: 526 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585
G SVDC+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL
Sbjct: 523 GRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLL 582
Query: 586 NLEVAGSEPGIDGEEIAPLAKENVATP 612
L VAGS PGI+G+EIAPLAKENVA P
Sbjct: 583 GLGVAGSAPGIEGDEIAPLAKENVAAP 609
|
Required for the synthesis of amylose in endosperm. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|A2Y8X2|SSG1_ORYSI Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=WAXY PE=3 SV=2 | Back alignment and function description |
|---|
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/567 (67%), Positives = 449/567 (79%), Gaps = 2/567 (0%)
Query: 47 DDLQVKTMASKLATSRQAGRNGFRSQNGPSLMI-VCGVGLNILFVGTEVAPWSKTGGLGD 105
D + S AT +Q S+ PS+++ G G+N++FVG E+APWSKTGGLGD
Sbjct: 44 DATSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGD 103
Query: 106 VLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165
VLGGLPPA+AANGHRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRV
Sbjct: 104 VLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRV 163
Query: 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGP 225
F+DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G
Sbjct: 164 FIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGT 223
Query: 226 YGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNL 285
YG+ +VVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL
Sbjct: 224 YGE-DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNL 282
Query: 286 PAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI 345
+F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI
Sbjct: 283 SERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNI 342
Query: 346 IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405
+R TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+
Sbjct: 343 MRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPL 402
Query: 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465
I FIGRLEEQKG D++AAAIP ++E+VQI++LGTGKK EK L+ +E YP K R V K
Sbjct: 403 IAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVK 462
Query: 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 525
FN PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF M
Sbjct: 463 FNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHM 522
Query: 526 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585
G SVDC+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL
Sbjct: 523 GRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLL 582
Query: 586 NLEVAGSEPGIDGEEIAPLAKENVATP 612
L VAGS PGI+G+EIAPLAKENVA P
Sbjct: 583 GLGVAGSAPGIEGDEIAPLAKENVAAP 609
|
Required for the synthesis of amylose in endosperm. Oryza sativa subsp. indica (taxid: 39946) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 612 | ||||||
| 375151860 | 611 | GBSSII-2 [Citrus sinensis] | 0.998 | 1.0 | 0.993 | 0.0 | |
| 375151864 | 618 | GBSSII-2 [Prunus persica] | 0.946 | 0.936 | 0.795 | 0.0 | |
| 182636946 | 615 | granule bound starch synthase Ib precurs | 0.972 | 0.967 | 0.776 | 0.0 | |
| 223029784 | 615 | granule-bound starch synthase [Nelumbo n | 0.993 | 0.988 | 0.756 | 0.0 | |
| 225466653 | 614 | PREDICTED: granule-bound starch synthase | 0.991 | 0.988 | 0.754 | 0.0 | |
| 197725528 | 615 | granule-bound starch synthase [Nelumbo n | 0.995 | 0.990 | 0.757 | 0.0 | |
| 170676395 | 614 | granule bound starch synthase Ib precurs | 0.965 | 0.962 | 0.762 | 0.0 | |
| 258489621 | 609 | granule-bound starch synthase 1 [Gossypi | 0.988 | 0.993 | 0.737 | 0.0 | |
| 211906484 | 609 | granule bound starch synthase [Gossypium | 0.988 | 0.993 | 0.733 | 0.0 | |
| 211906516 | 609 | granule bound starch synthase [Gossypium | 0.988 | 0.993 | 0.735 | 0.0 |
| >gi|375151860|gb|AFA36446.1| GBSSII-2 [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 1234 bits (3192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/612 (99%), Positives = 611/612 (99%), Gaps = 1/612 (0%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIIDDLQVKTMASKLAT 60
MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIID+LQVKTMASKLAT
Sbjct: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIIDELQVKTMASKLAT 60
Query: 61 SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR 120
SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR
Sbjct: 61 SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR 120
Query: 121 VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180
VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT
Sbjct: 121 VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180
Query: 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHT 240
QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYG+ +VVFVANDWHT
Sbjct: 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGE-DVVFVANDWHT 239
Query: 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYN 300
SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYN
Sbjct: 240 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYN 299
Query: 301 KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV 360
KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV
Sbjct: 300 KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV 359
Query: 361 QEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDI 420
QEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDI
Sbjct: 360 QEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDI 419
Query: 421 LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480
LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF
Sbjct: 420 LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479
Query: 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 540
ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV
Sbjct: 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 539
Query: 541 AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEE 600
AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEE
Sbjct: 540 AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEE 599
Query: 601 IAPLAKENVATP 612
IAPLAKENVATP
Sbjct: 600 IAPLAKENVATP 611
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375151864|gb|AFA36448.1| GBSSII-2 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 959 bits (2479), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/581 (79%), Positives = 519/581 (89%), Gaps = 2/581 (0%)
Query: 33 RCMKHSGLRSLNIIDDLQVKTMASKLA-TSRQAGRNGFRSQNGPSLMIVCGVGLNILFVG 91
+ M H+GLR+LN +D+L+VK M + +A +R N R+ + P+ IVCG G+N++F+G
Sbjct: 39 QAMTHNGLRALNTVDELRVKIMGNSIARQARSKSFNSTRTGSRPAGTIVCGSGMNLVFLG 98
Query: 92 TEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEK 151
TEV PWSKTGGLGDVLGGLPPA+AANGHRVMT++PRYDQYKDAWDT+V IE+KVG+K EK
Sbjct: 99 TEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTVSPRYDQYKDAWDTEVTIEVKVGEKTEK 158
Query: 152 VRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAP 211
VRFFHC+KRGVDRVFVDHP FL KVWGKT SKIYGP GED++DNQLRFSLLC+AALEAP
Sbjct: 159 VRFFHCYKRGVDRVFVDHPLFLEKVWGKTASKIYGPIAGEDFKDNQLRFSLLCRAALEAP 218
Query: 212 RILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAY 271
R+LNLNS+KYFSGPYG++ VVF+ANDWHT+L+PCYLK +Y+PKG+Y+SAKV FCIHNIAY
Sbjct: 219 RVLNLNSSKYFSGPYGEE-VVFIANDWHTALLPCYLKAIYQPKGIYRSAKVAFCIHNIAY 277
Query: 272 QGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 331
QGRFA DF LLNLP +FKSSFDFIDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+E
Sbjct: 278 QGRFASADFALLNLPDEFKSSFDFIDGYDKPVKGRKINWMKAGILESDKVLTVSPYYAEE 337
Query: 332 LVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391
LVS +KGVELDN+IRK GI GIVNGMDVQEWNPLTDKY KYDASTV DAKPLLKEAL
Sbjct: 338 LVSTVEKGVELDNVIRKAGILGIVNGMDVQEWNPLTDKYTAAKYDASTVTDAKPLLKEAL 397
Query: 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQ 451
QAEVGLPVDR+IPVIGFIGRLEEQKGSDIL AIPHFIKENVQIIVLGTGKKPMEKQLEQ
Sbjct: 398 QAEVGLPVDRDIPVIGFIGRLEEQKGSDILIEAIPHFIKENVQIIVLGTGKKPMEKQLEQ 457
Query: 452 LEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 511
LEI YP+KARGVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGG
Sbjct: 458 LEIKYPDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG 517
Query: 512 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDL 571
LVDTV+EGFTGFQMG F+V+CE VDP DV A++TTV RAL TYGT A E++ N MAQDL
Sbjct: 518 LVDTVKEGFTGFQMGGFNVECEVVDPADVQAIATTVTRALGTYGTPAFTEIIGNCMAQDL 577
Query: 572 SWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 612
SWKGPAKKWEE LLNL V SEPGIDGEEIAPLAKEN+ATP
Sbjct: 578 SWKGPAKKWEEVLLNLGVVDSEPGIDGEEIAPLAKENIATP 618
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|182636946|gb|ACB97678.1| granule bound starch synthase Ib precursor [Malus x domestica] gi|357528262|gb|AET80370.1| granule-bound starch synthase GBSS2 [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/603 (77%), Positives = 529/603 (87%), Gaps = 8/603 (1%)
Query: 14 SYGHEVASGLNSKA--SQMKF--RCMKHSGLRSLNIIDDLQVKTMASKLATSRQAGRNGF 69
SYG V+SG + K +M F + + H+GLR+LN +D+L+V+ MA+ +A RQ
Sbjct: 17 SYG-AVSSGSDPKTGFKKMSFGKQTLTHNGLRALNSVDELRVRIMANSVA--RQTRGKTV 73
Query: 70 RSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129
S S +IVCG G+N++F+GTEV PWSKTGGLGDVLGGLPPA+AANGHRVMTI+PRYD
Sbjct: 74 NSTRKTSGVIVCGSGMNLVFLGTEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTISPRYD 133
Query: 130 QYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRT 189
QYKDAWDT+V +ELKVGDK E VRFFHC+KRGVDRVFVDHP FL KVWGKT SKIYGP
Sbjct: 134 QYKDAWDTEVTVELKVGDKTETVRFFHCYKRGVDRVFVDHPLFLEKVWGKTASKIYGPVA 193
Query: 190 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKT 249
G D++DNQLRFSLLCQAAL APR+LNLNS+KYFSGPYG++ VVF+ANDWHT+L+PCYLK
Sbjct: 194 GVDFKDNQLRFSLLCQAALVAPRVLNLNSSKYFSGPYGEE-VVFIANDWHTALLPCYLKA 252
Query: 250 MYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309
+YKPKG+YK+AKV FCIHNIAYQGRFAF DF LLNLP +FKSSFDFIDGYNKPV+GRKIN
Sbjct: 253 IYKPKGIYKTAKVAFCIHNIAYQGRFAFADFALLNLPNEFKSSFDFIDGYNKPVKGRKIN 312
Query: 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDK 369
WMKAGILESD VLTVSP+YA+ELVS +KGVELDNI+RK+ I+GIVNGMDVQEWNP+TDK
Sbjct: 313 WMKAGILESDKVLTVSPYYAEELVSSVEKGVELDNILRKSRIQGIVNGMDVQEWNPVTDK 372
Query: 370 YIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 429
Y VKYDASTV DAKPLLKEALQAEVGLPVDR+IPVIGFIGRLEEQKGSDIL AIPHFI
Sbjct: 373 YTTVKYDASTVADAKPLLKEALQAEVGLPVDRDIPVIGFIGRLEEQKGSDILIEAIPHFI 432
Query: 430 KENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEP 489
KENVQIIVLGTGKKPMEKQLEQLE YP+KARG+AKFN+PLAHMI AGADF+L+PSRFEP
Sbjct: 433 KENVQIIVLGTGKKPMEKQLEQLETEYPDKARGIAKFNVPLAHMITAGADFMLVPSRFEP 492
Query: 490 CGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549
CGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGF MG+F+V+CE VDPVDV A++TTV R
Sbjct: 493 CGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFHMGAFNVECEVVDPVDVQAIATTVTR 552
Query: 550 ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENV 609
AL +YGT A E++ N MAQDLSWKGPAKKWEE LL+L VA SE GI+GEEIAPLAKENV
Sbjct: 553 ALGSYGTPAFTEIISNCMAQDLSWKGPAKKWEEVLLSLGVANSELGIEGEEIAPLAKENV 612
Query: 610 ATP 612
ATP
Sbjct: 613 ATP 615
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223029784|gb|ACM78591.1| granule-bound starch synthase [Nelumbo nucifera] | Back alignment and taxonomy information |
|---|
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/619 (75%), Positives = 532/619 (85%), Gaps = 11/619 (1%)
Query: 1 MATAVAASSFVSRS----YGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS FVS S YG S + +Q+ R M H GLRS+N +D L ++
Sbjct: 1 MAT-VTASKFVSTSSLVSYGGMSGSQPKTALAQIGLRNQTMTHHGLRSVNNVDKLNLRAN 59
Query: 55 ASKLATSRQAGRNGFRSQNGPSLMIV-CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
A T+ QA +++N ++ CG G+N++FVG EV PWSKTGGLGDVLGGLPPA
Sbjct: 60 AK--TTTGQAKGKECKTRNAKERSVIRCGSGMNLVFVGAEVGPWSKTGGLGDVLGGLPPA 117
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
+AANGHRVMT+APRYDQYKDAWDT V++E+KVGD+IE VRFFHC+KRGVDRVFVDHP FL
Sbjct: 118 MAANGHRVMTVAPRYDQYKDAWDTSVLVEIKVGDRIETVRFFHCYKRGVDRVFVDHPMFL 177
Query: 174 AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVF 233
KVWGKT SKIYGP GEDY DNQLRFSLLCQAALEAPR+LNLNS+K+FSGPYG+ +VVF
Sbjct: 178 EKVWGKTGSKIYGPMAGEDYSDNQLRFSLLCQAALEAPRVLNLNSSKHFSGPYGE-DVVF 236
Query: 234 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSF 293
+ NDWHT+L+PCYLKTMYK +G+Y++AKV FCIHNIAYQGRF+F DF LLNLP +FKSSF
Sbjct: 237 ICNDWHTALLPCYLKTMYKSRGIYRNAKVAFCIHNIAYQGRFSFSDFSLLNLPDEFKSSF 296
Query: 294 DFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG 353
DFIDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+ELVSG +KGVELDNIIRKTGI G
Sbjct: 297 DFIDGYDKPVKGRKINWMKAGILESDRVLTVSPYYAEELVSGIEKGVELDNIIRKTGITG 356
Query: 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 413
IVNG DVQEWNP TDKYI VKYDA+TVMDAKPLLKEALQ+EVGLPVDRNIPVIGFIGRLE
Sbjct: 357 IVNGTDVQEWNPTTDKYISVKYDATTVMDAKPLLKEALQSEVGLPVDRNIPVIGFIGRLE 416
Query: 414 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473
EQKGSDILAA+IP FI ENVQIIVLGTGKK EKQLEQLEI YP+KARGVAKFN+PLAHM
Sbjct: 417 EQKGSDILAASIPKFIGENVQIIVLGTGKKAFEKQLEQLEIKYPDKARGVAKFNVPLAHM 476
Query: 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 533
IIAGADF+LIPSRFEPCGLIQL M YGT+P+V+STGGLVDTV+EG+TGF MG+F+VDC+
Sbjct: 477 IIAGADFLLIPSRFEPCGLIQLQTMPYGTIPLVSSTGGLVDTVKEGYTGFHMGAFNVDCD 536
Query: 534 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSE 593
AVDP DV AV+TTV++AL TYGT A+ +M+KN MAQ+ SWKGPAKKWE LL+LEVAGSE
Sbjct: 537 AVDPADVNAVATTVKKALKTYGTSAMIQMIKNCMAQNFSWKGPAKKWESILLSLEVAGSE 596
Query: 594 PGIDGEEIAPLAKENVATP 612
PGIDGEEIAPLAKENVATP
Sbjct: 597 PGIDGEEIAPLAKENVATP 615
|
Source: Nelumbo nucifera Species: Nelumbo nucifera Genus: Nelumbo Family: Nelumbonaceae Order: Proteales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225466653|ref|XP_002273608.1| PREDICTED: granule-bound starch synthase 1, chloroplastic/amyloplastic [Vitis vinifera] gi|296089007|emb|CBI38710.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/619 (75%), Positives = 534/619 (86%), Gaps = 12/619 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASG--LNSKASQMKFR----CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS+F+ RS + + KA+ K R + H+GLR+LN +D+L +T
Sbjct: 1 MAT-VTASNFLPRSSNGNCGATCRIEKKATLTKLRPKIQILAHNGLRALNSVDELHQRTT 59
Query: 55 ASKLATSRQAGRNGFRSQN-GPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
+ +R+ R GF+++N P I+CG G++++FVGTEV PWSKTGGLGDVLGGLPPA
Sbjct: 60 ---IKVTRKGSRKGFKNENPRPWGGIICGCGMSLIFVGTEVGPWSKTGGLGDVLGGLPPA 116
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
++ANGHRVMT++PR+DQYKDAWDT V ++L VGD+ EKVRFFHC+KRGVDRVFVDHPWFL
Sbjct: 117 MSANGHRVMTVSPRFDQYKDAWDTGVTVQLNVGDRFEKVRFFHCYKRGVDRVFVDHPWFL 176
Query: 174 AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVF 233
KVWGKT SK+YGP GED+QDNQLRFSLLCQAALEAPRILNL S+KYFSGPYG+ +VVF
Sbjct: 177 EKVWGKTGSKLYGPLAGEDFQDNQLRFSLLCQAALEAPRILNLKSSKYFSGPYGE-DVVF 235
Query: 234 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSF 293
+ANDWHT+ + CYLKTMY+ KG Y +AKVVFCIHNIAYQGRFAF DF LLNLP +FKSSF
Sbjct: 236 IANDWHTAPLACYLKTMYRLKGRYGNAKVVFCIHNIAYQGRFAFADFSLLNLPDEFKSSF 295
Query: 294 DFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG 353
DF DGY KPV+GRKINWMKAGILE+D VLTVSP+YA+ELVSG +KGVELDNI+R+TGI G
Sbjct: 296 DFTDGYEKPVKGRKINWMKAGILEADKVLTVSPYYAKELVSGVEKGVELDNILRRTGITG 355
Query: 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 413
I+NGMDVQEWNPLTDKYI +KYDASTV +AK LLKEALQAE GLPVDRNIPVIGFIGRLE
Sbjct: 356 IINGMDVQEWNPLTDKYISIKYDASTVKEAKLLLKEALQAEAGLPVDRNIPVIGFIGRLE 415
Query: 414 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473
EQKGSDIL AAIP F+ NVQIIVLGTGKKPMEKQLEQLE YP+ ARGVAKFN+PLAHM
Sbjct: 416 EQKGSDILVAAIPQFVTANVQIIVLGTGKKPMEKQLEQLEKKYPDNARGVAKFNVPLAHM 475
Query: 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 533
IIAGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMGSFSV+C+
Sbjct: 476 IIAGADFLLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFSVECD 535
Query: 534 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSE 593
AVDP D AV+T+V+RALATYGT AL EM++N MAQDLSWKGPAKKWEE LL+L V GSE
Sbjct: 536 AVDPADATAVATSVKRALATYGTPALTEMVQNCMAQDLSWKGPAKKWEEVLLSLGVPGSE 595
Query: 594 PGIDGEEIAPLAKENVATP 612
PGIDGEEIAPL+KENVATP
Sbjct: 596 PGIDGEEIAPLSKENVATP 614
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|197725528|gb|ACH72975.1| granule-bound starch synthase [Nelumbo nucifera] | Back alignment and taxonomy information |
|---|
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/618 (75%), Positives = 528/618 (85%), Gaps = 9/618 (1%)
Query: 1 MATAVAASSFVSRS----YGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS FVS S YG S + +Q+ R M H GLRS+N +D L ++
Sbjct: 1 MAT-VTASKFVSTSSLVSYGGMSGSQPKTALAQIGLRNQTMTHHGLRSVNNVDKLNLRAN 59
Query: 55 ASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPAL 114
A K T R G+ +I CG G+N++FVG EV PWSKTGGLGDVLGGLPPA+
Sbjct: 60 A-KTTTGRAKGKECKTRNAKERSVIRCGSGMNLVFVGAEVGPWSKTGGLGDVLGGLPPAM 118
Query: 115 AANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLA 174
AANGHRVMT+APRYDQYKDAWDT V++E+KVGD+IE VRFFHC+KRGVDRVFVDHP FL
Sbjct: 119 AANGHRVMTVAPRYDQYKDAWDTSVLVEIKVGDRIETVRFFHCYKRGVDRVFVDHPMFLE 178
Query: 175 KVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFV 234
KVWGKT SKIYGP +GEDY DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYG+ +VVF+
Sbjct: 179 KVWGKTGSKIYGPMSGEDYSDNQLRFSLLCQAALEAPRVLNLNSSKPFSGPYGE-DVVFI 237
Query: 235 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 294
NDWHT+L+PCYLKTMYK +G+Y++AKV FCIHNIAYQGRF+F DF LLNLP +FKSSFD
Sbjct: 238 CNDWHTALLPCYLKTMYKSRGIYRNAKVAFCIHNIAYQGRFSFSDFSLLNLPDEFKSSFD 297
Query: 295 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 354
FIDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+EL SG +KGVELDNIIRKTGI GI
Sbjct: 298 FIDGYDKPVKGRKINWMKAGILESDRVLTVSPYYAEELASGIEKGVELDNIIRKTGITGI 357
Query: 355 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE 414
VNG DVQEWNP TDKYI VKYDA+TVMDAKPLLKEALQ+EVGLPVDRNIPVIGFIGRLEE
Sbjct: 358 VNGTDVQEWNPTTDKYISVKYDATTVMDAKPLLKEALQSEVGLPVDRNIPVIGFIGRLEE 417
Query: 415 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 474
QKGSDILAA+IP FI ENVQIIVLGTGKK EKQLEQLEI YP+KARGVAKFN+PLAHMI
Sbjct: 418 QKGSDILAASIPKFIGENVQIIVLGTGKKAFEKQLEQLEIKYPDKARGVAKFNVPLAHMI 477
Query: 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA 534
IAGADF+LIPSRFEPCGLIQL M YGT+P+V+STGGLVDTV+EG+TGF MG+F+VDC+A
Sbjct: 478 IAGADFLLIPSRFEPCGLIQLQTMPYGTIPLVSSTGGLVDTVKEGYTGFHMGAFNVDCDA 537
Query: 535 VDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEP 594
VDP DV AV+TTV++AL TYGT A+ +M+KN MAQ+ SWKGPAKKWE LL+LEVAGSEP
Sbjct: 538 VDPADVNAVATTVKKALKTYGTSAMIQMIKNCMAQNFSWKGPAKKWESILLSLEVAGSEP 597
Query: 595 GIDGEEIAPLAKENVATP 612
GIDGEEIAPLAKENVATP
Sbjct: 598 GIDGEEIAPLAKENVATP 615
|
Source: Nelumbo nucifera Species: Nelumbo nucifera Genus: Nelumbo Family: Nelumbonaceae Order: Proteales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|170676395|gb|ACB30385.1| granule bound starch synthase Ib precursor [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/601 (76%), Positives = 519/601 (86%), Gaps = 10/601 (1%)
Query: 17 HEVASGLNSKASQMKFRCMK----HSGLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQ 72
H SKA+ R ++ H+GLR LN++D+L +T A QA R G + +
Sbjct: 19 HRSILSYESKAASTGLRSLRQTNTHNGLRILNLVDELLNRTPIQVKAV--QARRKGLQGK 76
Query: 73 N-GPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY 131
N P+ +I+CG +N++F+GTEV PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY
Sbjct: 77 NVRPTGVIICG--MNLIFLGTEVGPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY 134
Query: 132 KDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGE 191
KDAWDT V IE+KVGDK EKV FFHCHKRGVDRVFVDHP FL KVWGK+ +K+YGP GE
Sbjct: 135 KDAWDTSVTIEVKVGDKTEKVGFFHCHKRGVDRVFVDHPIFLEKVWGKSGTKLYGPTAGE 194
Query: 192 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMY 251
DYQDNQLRFSL CQAALEAPR+LNL SNKYFSGPYG+ +V+F+ANDWHT+LIPCYLK+MY
Sbjct: 195 DYQDNQLRFSLFCQAALEAPRVLNLTSNKYFSGPYGE-DVIFIANDWHTALIPCYLKSMY 253
Query: 252 KPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM 311
+ G+YK+A+VV+CIHNIAYQGRFAF DF LLNLP QFKSSFDF+DG+ KPV GRK NWM
Sbjct: 254 QSIGIYKNARVVYCIHNIAYQGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWM 313
Query: 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYI 371
KAGILESD+VLTVSP+YA+ELVSG DKGVELDNIIR+TGI GIVNGMDVQEWNP TDKY+
Sbjct: 314 KAGILESDLVLTVSPYYAEELVSGPDKGVELDNIIRRTGITGIVNGMDVQEWNPSTDKYL 373
Query: 372 GVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE 431
VKY+ASTV++ K LLKEALQAEVGLPVDRNIP+IGFIGRLEEQKGSDIL AAIP FIKE
Sbjct: 374 TVKYNASTVVEGKALLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAIPQFIKE 433
Query: 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCG 491
N+QI+ LGTGKK MEKQLEQLEI YP+KARGVAKFN+PLAHMIIAGADFILIPSRFEPCG
Sbjct: 434 NIQIVALGTGKKQMEKQLEQLEIAYPDKARGVAKFNVPLAHMIIAGADFILIPSRFEPCG 493
Query: 492 LIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551
LIQL AMRYGTVPIVASTGGLVDTV+EGFTGFQMGSF+V+CEAVDP DV A++ TV+RAL
Sbjct: 494 LIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECEAVDPADVDALAKTVKRAL 553
Query: 552 ATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVAT 611
A +GT A E++KN MAQDLSWKGPAK+WEE LL+L V GSE GI+GEEIAP AKEN+AT
Sbjct: 554 AVHGTLAFTEIIKNCMAQDLSWKGPAKRWEEVLLSLGVPGSEAGIEGEEIAPQAKENLAT 613
Query: 612 P 612
P
Sbjct: 614 P 614
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|258489621|gb|ACV72639.1| granule-bound starch synthase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/616 (73%), Positives = 524/616 (85%), Gaps = 11/616 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS + H + G ++KA+ + + M H+GLRSLN +D LQ++T +
Sbjct: 1 MAT-LTTSHFVS-TCSHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLQMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADHR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAN 236
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYG+ +VVF+AN
Sbjct: 175 WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGE-DVVFIAN 233
Query: 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 296
DWH++L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFI
Sbjct: 234 DWHSALLPCYLKSMYQSRGIYMNAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFI 293
Query: 297 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356
DGYNKPV+GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVN
Sbjct: 294 DGYNKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVN 353
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 416
GMDVQEWNP +DKYI VKYDA+TVM AKPLLKEALQAEVGLP D ++P+IGFIGRLEEQK
Sbjct: 354 GMDVQEWNPASDKYISVKYDATTVMKAKPLLKEALQAEVGLPCDGDVPLIGFIGRLEEQK 413
Query: 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476
GSDILA AIP + EN QI+VLGTGKK MEKQ+EQLEI YP+ R VAKFN+PLAHMIIA
Sbjct: 414 GSDILAEAIPKLVAENCQIVVLGTGKKAMEKQIEQLEIQYPDNVRAVAKFNVPLAHMIIA 473
Query: 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536
GAD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VD
Sbjct: 474 GADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVD 533
Query: 537 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGI 596
P DV V TV+RALATYGTQAL EM++N MAQD SWKGP++ WE+ LL+L VAGSEPGI
Sbjct: 534 PSDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKMLLSLGVAGSEPGI 593
Query: 597 DGEEIAPLAKENVATP 612
+GEE+APLAKENVATP
Sbjct: 594 EGEEVAPLAKENVATP 609
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906484|gb|ACJ11735.1| granule bound starch synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/616 (73%), Positives = 522/616 (84%), Gaps = 11/616 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS S H + G ++KA+ + + M H+GLRSLN +D L+++T +
Sbjct: 1 MAT-LTTSHFVSTS-SHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLRMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + +R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADYR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAN 236
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYG+ +VVF+AN
Sbjct: 175 WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGE-DVVFIAN 233
Query: 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 296
DWH++L+PCYLK+MY+ +G+Y SAKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFI
Sbjct: 234 DWHSALLPCYLKSMYQSRGIYMSAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFI 293
Query: 297 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356
DGYNKPV GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVN
Sbjct: 294 DGYNKPVMGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVN 353
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 416
GMDVQEWNP +DKYI VKYDA+T+M AKPLLKEA+Q EVGLP DR++P+IGFIGRLEEQK
Sbjct: 354 GMDVQEWNPASDKYISVKYDATTIMKAKPLLKEAIQGEVGLPCDRDVPLIGFIGRLEEQK 413
Query: 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476
GSDILA AIP EN QI+VLGTGKK ME Q+EQLEI YP+ R VAKFN+PLAHMIIA
Sbjct: 414 GSDILAEAIPKLAAENCQIVVLGTGKKAMENQIEQLEIQYPDNVRAVAKFNVPLAHMIIA 473
Query: 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536
GAD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VD
Sbjct: 474 GADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVD 533
Query: 537 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGI 596
P DV V TV+RALATYGTQAL EM++N MAQD SWKGP++ WE+ LL+L VAGSEPGI
Sbjct: 534 PSDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKMLLSLGVAGSEPGI 593
Query: 597 DGEEIAPLAKENVATP 612
+GEEIAPLA+ENVATP
Sbjct: 594 EGEEIAPLARENVATP 609
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906516|gb|ACJ11751.1| granule bound starch synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/616 (73%), Positives = 523/616 (84%), Gaps = 11/616 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS + H + G ++KA+ + + M H+GLRSLN +D LQ++T +
Sbjct: 1 MAT-LTTSHFVS-TCSHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLQMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADHR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAN 236
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYG+ +VVF+AN
Sbjct: 175 WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGE-DVVFIAN 233
Query: 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 296
DWH++L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFI
Sbjct: 234 DWHSALLPCYLKSMYQSRGIYMNAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFI 293
Query: 297 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356
DGYNKPV+GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVN
Sbjct: 294 DGYNKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVN 353
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 416
GMDVQEWNP +DKYI VKYDA+TVM AKPLLKEALQAEVGLP D ++P+IGFIGRLEEQK
Sbjct: 354 GMDVQEWNPASDKYISVKYDATTVMKAKPLLKEALQAEVGLPCDGDVPLIGFIGRLEEQK 413
Query: 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476
GSDILA AIP + EN QI+VLGTGKK MEKQ+EQLEI YP+ R VAKFN+PLAHMIIA
Sbjct: 414 GSDILAEAIPKLVAENCQIVVLGTGKKAMEKQIEQLEIQYPDNVRAVAKFNVPLAHMIIA 473
Query: 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536
GAD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VD
Sbjct: 474 GADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVD 533
Query: 537 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGI 596
P DV V TV+RALATYGTQAL EM++N MAQD SWKGP++ WE+ LL+L VAGSEPGI
Sbjct: 534 PSDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKMLLSLGVAGSEPGI 593
Query: 597 DGEEIAPLAKENVATP 612
+GEE+APLAKENVA P
Sbjct: 594 EGEEVAPLAKENVAPP 609
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 612 | ||||||
| TAIR|locus:2037950 | 610 | GBSS1 "granule bound starch sy | 0.991 | 0.995 | 0.666 | 9.8e-222 | |
| UNIPROTKB|Q42968 | 609 | WAXY "Granule-bound starch syn | 0.916 | 0.921 | 0.646 | 1.4e-197 | |
| TAIR|locus:2102102 | 792 | SS2 "starch synthase 2" [Arabi | 0.781 | 0.603 | 0.400 | 6.7e-88 | |
| TAIR|locus:2169749 | 652 | SS1 "starch synthase 1" [Arabi | 0.785 | 0.737 | 0.384 | 1.2e-83 | |
| TIGR_CMR|BA_5120 | 476 | BA_5120 "glycogen synthase" [B | 0.557 | 0.716 | 0.375 | 8.8e-59 | |
| TIGR_CMR|GSU_1023 | 501 | GSU_1023 "glycogen synthase" [ | 0.549 | 0.670 | 0.364 | 1.2e-51 | |
| TIGR_CMR|GSU_3257 | 484 | GSU_3257 "glycogen synthase" [ | 0.542 | 0.685 | 0.371 | 2.4e-51 | |
| UNIPROTKB|Q9KRB6 | 484 | glgA "Glycogen synthase" [Vibr | 0.544 | 0.688 | 0.352 | 5.1e-51 | |
| TIGR_CMR|VC_1726 | 484 | VC_1726 "glycogen synthase" [V | 0.544 | 0.688 | 0.352 | 5.1e-51 | |
| UNIPROTKB|P0A6U8 | 477 | glgA [Escherichia coli K-12 (t | 0.622 | 0.798 | 0.328 | 7.7e-48 |
| TAIR|locus:2037950 GBSS1 "granule bound starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2141 (758.7 bits), Expect = 9.8e-222, P = 9.8e-222
Identities = 410/615 (66%), Positives = 490/615 (79%)
Query: 1 MATAVAASSFVSRS--YGHEVASGLNSKAS-QMKFRCMKHSGLRSLNIIDDLQVKTMASK 57
MAT A+S+FVSR+ + + AS + A +K + + H GLRS N++D+LQ ++ A K
Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQA-K 59
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXX 117
+++ + R+ G IVC G++++F+G EV PWSKT
Sbjct: 60 PVSAKSSKRSSKVKTAGK---IVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAAR 116
Query: 118 XHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
HRVMTI PRYDQYKDAWDT VV+++KVGDK+E VRFFHC+KRGVDRVFVDHP FLAKV
Sbjct: 117 GHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVV 176
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAND 237
GKT SKIYGP TG DY DNQLRFSLLCQAALEAP++LNLNS+KYFSGPYG+ +VVFVAND
Sbjct: 177 GKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGE-DVVFVAND 235
Query: 238 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 297
WHT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+D
Sbjct: 236 WHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMD 295
Query: 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 357
GY KPV+GRKINWMKA ILE+ VLTVSP+YAQEL+SG D+GVEL +R + GI+NG
Sbjct: 296 GYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIING 355
Query: 358 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 417
MDVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKG
Sbjct: 356 MDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKG 415
Query: 418 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477
SDIL AI F+ NVQ+++LGTGKK ME Q+ +LE +P KA GVAKFN+PLAHMI AG
Sbjct: 416 SDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAG 475
Query: 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537
ADFI++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP
Sbjct: 476 ADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDP 535
Query: 538 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 597
DV A + V RA+A YGT A+ EM+KN M QD SWKGPA+ WE+ LL+L VAGSE G +
Sbjct: 536 DDVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTE 595
Query: 598 GEEIAPLAKENVATP 612
GEEIAPLAKENVATP
Sbjct: 596 GEEIAPLAKENVATP 610
|
|
| UNIPROTKB|Q42968 WAXY "Granule-bound starch synthase 1, chloroplastic/amyloplastic" [Oryza glaberrima (taxid:4538)] | Back alignment and assigned GO terms |
|---|
Score = 1913 (678.5 bits), Expect = 1.4e-197, P = 1.4e-197
Identities = 365/565 (64%), Positives = 433/565 (76%)
Query: 49 LQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFVGTEVAPWSKTXXXXXXX 107
L V T A +++ + G S+ PS+++ G G+N++FVG E+APWSKT
Sbjct: 48 LSVTTSARATPKQQRSVQRG--SRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVL 105
Query: 108 XXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFV 167
HRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRVF+
Sbjct: 106 GGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFI 165
Query: 168 DHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYG 227
DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G YG
Sbjct: 166 DHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYG 225
Query: 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPA 287
+ +VVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL
Sbjct: 226 E-DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSE 284
Query: 288 QFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR 347
+F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R
Sbjct: 285 RFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMR 344
Query: 348 KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 407
TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+I
Sbjct: 345 LTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIA 404
Query: 408 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467
FIGRLEEQKG D++AAAIP ++E+VQI++LGTGKK EK L+ +E YP K R V KFN
Sbjct: 405 FIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFN 464
Query: 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 527
PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF MG
Sbjct: 465 APLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGR 524
Query: 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587
SV+C+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL L
Sbjct: 525 LSVNCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGL 584
Query: 588 EVAGSEPGIDGEEIAPLAKENVATP 612
VAGS PGI+G+EIAPLAKENVA P
Sbjct: 585 GVAGSAPGIEGDEIAPLAKENVAAP 609
|
|
| TAIR|locus:2102102 SS2 "starch synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 204/509 (40%), Positives = 281/509 (55%)
Query: 85 LNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELK 144
+N++ V E AP+SKT HRVM + PRY +Y +A D V K
Sbjct: 301 MNVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKRYK 360
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
V + +V +FH GVD VF+D P F + IYG G D R L C
Sbjct: 361 VAGQDMEVMYFHAFIDGVDFVFIDSPEFR-----HLSNNIYG---GNRL-DILKRMVLFC 411
Query: 205 QAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 264
+AA+E P + Y G N+ F+ANDWHT+L+P YLK Y+ G+ K + V
Sbjct: 412 KAAVEVPWYVPCGGVCYGDG-----NLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVL 466
Query: 265 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324
IHNIA+QGR +DF ++LP+ + SF D PV G N AG+ +D VLTV
Sbjct: 467 VIHNIAHQGRGPVDDFSYVDLPSHYLDSFKLYD----PVGGEHFNIFAAGLKAADRVLTV 522
Query: 325 SPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDAS 378
S Y+ E+ + E G L NII + K GIVNG+D QEWNP D Y+ Y
Sbjct: 523 SHGYSWEVKTLEG-GWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLE 581
Query: 379 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL 438
+ KP K ALQ E+GLPV ++P+IGFIGRL+ QKG D++A A+P + ++VQ+++L
Sbjct: 582 NLHIGKPQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVML 641
Query: 439 GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAM 498
GTG+ +E+ L Q+E Y +KARG F++ AH I AGAD +L+PSRFEPCGL QL+AM
Sbjct: 642 GTGRPDLEEVLRQMEHQYRDKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAM 701
Query: 499 RYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-- 556
YGT+P+V + GGL DTV++ F + D + + + L TY
Sbjct: 702 NYGTIPVVHAVGGLRDTVQQ-FDPYSETGLGW---TFDSAEAGKLIHALGNCLLTYREYK 757
Query: 557 QALAEMMKNGMAQDLSWKGPAKKWEETLL 585
++ + + GM QDLSW A+K+EE L+
Sbjct: 758 ESWEGLQRRGMTQDLSWDNAAEKYEEVLV 786
|
|
| TAIR|locus:2169749 SS1 "starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 197/513 (38%), Positives = 293/513 (57%)
Query: 86 NILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRY------DQ-YKDAWDTD 138
N++FV +E AP+SKT HRVM I+PRY D+ Y A D
Sbjct: 143 NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 202
Query: 139 VVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL 198
+ + + ++V F+H ++ GVD VFVDH K + + + YG G + DNQ
Sbjct: 203 IRVTVNCFGGSQEVSFYHEYRDGVDWVFVDH-----KSYHRPGNP-YGDSKGA-FGDNQF 255
Query: 199 RFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYK 258
RF+LLC AA EAP +L L F+ YG+K++ F+ NDWH L+P L Y+P G+YK
Sbjct: 256 RFTLLCHAACEAPLVLPLGG---FT--YGEKSL-FLVNDWHAGLVPILLAAKYRPYGVYK 309
Query: 259 SAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI-DGYNKPVR---GRKINWMKAG 314
A+ + IHN+A+QG + L LP+++ + ++ + + G +N +K
Sbjct: 310 DARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGA 369
Query: 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIG 372
I+ SD ++TVS YA E+ + E G L +++ RK+ I GI NG++V EWNP TD++I
Sbjct: 370 IVTSDRIITVSQGYAWEITTVEG-GYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIP 428
Query: 373 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 432
Y A V + K K ALQ E+GLP+ P+IGFIGRL+ QKG D++ A P + ++
Sbjct: 429 FHYSADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDD 487
Query: 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGL 492
+Q ++LG+G E + +E Y +K RG FN+P++H I AG D +L+PSRFEPCGL
Sbjct: 488 IQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGL 547
Query: 493 IQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV-DPVDVAAVSTTVRRAL 551
QL+AMRYGT+P+V TGGL DTVE F + G V P+ ++ + +R A
Sbjct: 548 NQLYAMRYGTIPVVHGTGGLRDTVEN-FNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAA 606
Query: 552 ATYGT--QALAEMMKNGMAQDLSWKGPAKKWEE 582
ATY Q+ +M+ GM ++ SW+ A ++E+
Sbjct: 607 ATYREYKQSWEGLMRRGMTRNYSWENAAVQYEQ 639
|
|
| TIGR_CMR|BA_5120 BA_5120 "glycogen synthase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 560 (202.2 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 136/362 (37%), Positives = 204/362 (56%)
Query: 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFK 290
V ++DWHT+++ L+ Y+ +Y+ K V+ IHN+ +QG F E + LL L ++
Sbjct: 128 VLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFPPEVMYDLLELGDEYF 187
Query: 291 SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG 350
S + ++ Y +N+MK GI+ SD + VSP Y +E + E G +LD ++RK
Sbjct: 188 HS-EQLEFYGN------VNFMKGGIIASDQITAVSPTYKEE-IQYEFFGEKLDGLLRKYN 239
Query: 351 IK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 408
K GIVNG+D +NP TD YI +YDA ++ + K K ALQ GLP + P+I
Sbjct: 240 DKLSGIVNGIDTSVYNPETDSYITAQYDADSLYE-KNENKRALQRYFGLPEKEDTPIISM 298
Query: 409 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 468
+ RL +QKG D++ ++E+VQ I+LG+G E+ E + YPEK + FN
Sbjct: 299 VTRLTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNE 358
Query: 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMG 526
LAH + AG+D L+PS FEPCGL QL A+ YGT+PIV TGGL DTV+ + TG G
Sbjct: 359 ELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNG 418
Query: 527 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLL 585
+ A D + TV RA+ Y +++ E ++K M +D SW+ A +++
Sbjct: 419 FSFTNFNAHDMLH------TVLRAIEFYHDKSVWEQLVKQAMTEDYSWEKSALAYKKLYK 472
Query: 586 NL 587
+L
Sbjct: 473 SL 474
|
|
| TIGR_CMR|GSU_1023 GSU_1023 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 130/357 (36%), Positives = 198/357 (55%)
Query: 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS 291
VF A+DWHT+ +P +L T+Y+ + A V +HN+ +QG F +L + +
Sbjct: 139 VFHAHDWHTAAVPVFLNTLYRDDPLVGGAASVLTVHNMQHQGNFYPGAMEVLGIGWEH-- 196
Query: 292 SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KT 349
F F+ G K + N +K G+ + ++ TVS YA+E+ + E G LD ++R
Sbjct: 197 -FTFL-GLEKD---NQTNLLKGGLYHATVLNTVSEGYAREMQTPE-YGWGLDGVVRARSA 250
Query: 350 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFI 409
+ GI+NG+D +EWNP TD +I Y S + K L K +Q GLP ++P+ G +
Sbjct: 251 DLVGILNGVDYEEWNPETDPHIVANYSRSD-LSGKKLCKRDVQRFFGLPERDDVPLFGLV 309
Query: 410 GRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 469
GRL +QKG DILA AI + +VQ+++LG G+ + YPEK +N
Sbjct: 310 GRLVKQKGIDILAEAIHRILALDVQVVMLGAGEPWSHFYFGDVRNEYPEKFGLYIGYNNG 369
Query: 470 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE----EGFTGFQM 525
L+H I AG+DF ++PS FEPCGL Q++++RYGT+PIV +TGGL D+VE + TG
Sbjct: 370 LSHRIEAGSDFFVMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFDEQNLTGNGF 429
Query: 526 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 582
+S D +A+ V T RR A+A ++ N MA+ +W+ A ++EE
Sbjct: 430 KFWSHDADALFDTVGWTVHTWYRRK------DAMAALIGNAMAKRFTWEDSAARYEE 480
|
|
| TIGR_CMR|GSU_3257 GSU_3257 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 137/369 (37%), Positives = 197/369 (53%)
Query: 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS 291
V +DW T+LIP L+ + VF IHN+AYQG F LP+ +
Sbjct: 133 VIHCHDWQTALIPIILRLEAADDPFFARTATVFTIHNLAYQGLFPAPAIAETGLPSALFT 192
Query: 292 SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG- 350
+ ++++ Y + +N MK IL +D++ TVS Y +E+++ +G L+ ++ + G
Sbjct: 193 T-EWLEYYGQ------LNLMKGAILTADLITTVSETYRREIMT-PTQGCGLEGVLARRGD 244
Query: 351 -IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFI 409
+ GIVNG+D EWNP DK I Y A + K K LQ E+G+P ++P+IG +
Sbjct: 245 DLFGIVNGIDTDEWNPAADKRIFRNYSARALA-GKAADKLELQRELGMPAAPSVPLIGMV 303
Query: 410 GRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA---KF 466
RL EQKG D++ +P + +Q ++LGTG LE+L + A ++ F
Sbjct: 304 SRLAEQKGIDLVLELLPRLAESELQFVLLGTGNACY---LERLNSFRSKGAANISINLGF 360
Query: 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEG 519
N PLA I AG+D L+PSRFEPCGL QL AMRYGTVP+V TGGL DTV EG
Sbjct: 361 NDPLAPKIYAGSDLFLMPSRFEPCGLSQLIAMRYGTVPVVRHTGGLRDTVVDVTRHPREG 420
Query: 520 FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAK 578
TGF F+ D A + RALA Y ++ +M+ GM +D+SW A
Sbjct: 421 -TGFTFEDFTAD----------ACWEAIERALAGYRDRESWRRIMRRGMHRDVSWHNAAG 469
Query: 579 KWEETLLNL 587
++E TL +
Sbjct: 470 RYE-TLYRM 477
|
|
| UNIPROTKB|Q9KRB6 glgA "Glycogen synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 124/352 (35%), Positives = 194/352 (55%)
Query: 235 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 294
ANDWHT L+P LKT Y+ ++ K V +HN ++G F++ ++ P S +
Sbjct: 136 ANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIFKGIFSYHQLEVI--PELNLSGME 193
Query: 295 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKG 353
F+ Y ++ ++AGI +D V VSP+YA EL++ +D+ +R+ + G
Sbjct: 194 FLQ-YGHD----HVSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHG 248
Query: 354 IVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGR 411
IVNG D EWNP TD Y+ Y + ++ K L K ALQ E+ LPV ++P+ G + R
Sbjct: 249 IVNGCDYSEWNPRTDHYLPATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCR 307
Query: 412 LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471
L QKG L + F++ NVQ++++GTG+ + +L ++ + K V ++ LA
Sbjct: 308 LTHQKGFHYLLPILEQFLRNNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLA 367
Query: 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 531
H + AG+DF L+PS FE CGL Q+++M YGT+PIV GGL DTV + + F +
Sbjct: 368 HWVEAGSDFFLMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTVND-YDKFPERATGFG 426
Query: 532 CEAVDPVDVAAVSTTVRRALATYGTQALAEMMK---NGMAQDLSWKGPAKKW 580
+ P A+ T++RAL Y Q EM+K M Q+ SW+ A+++
Sbjct: 427 YQEPTP---EALLITMQRALLFY-LQQPEEMLKVQQRAMQQNFSWEESAQEY 474
|
|
| TIGR_CMR|VC_1726 VC_1726 "glycogen synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 124/352 (35%), Positives = 194/352 (55%)
Query: 235 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 294
ANDWHT L+P LKT Y+ ++ K V +HN ++G F++ ++ P S +
Sbjct: 136 ANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIFKGIFSYHQLEVI--PELNLSGME 193
Query: 295 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKG 353
F+ Y ++ ++AGI +D V VSP+YA EL++ +D+ +R+ + G
Sbjct: 194 FLQ-YGHD----HVSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHG 248
Query: 354 IVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGR 411
IVNG D EWNP TD Y+ Y + ++ K L K ALQ E+ LPV ++P+ G + R
Sbjct: 249 IVNGCDYSEWNPRTDHYLPATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCR 307
Query: 412 LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471
L QKG L + F++ NVQ++++GTG+ + +L ++ + K V ++ LA
Sbjct: 308 LTHQKGFHYLLPILEQFLRNNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLA 367
Query: 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 531
H + AG+DF L+PS FE CGL Q+++M YGT+PIV GGL DTV + + F +
Sbjct: 368 HWVEAGSDFFLMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTVND-YDKFPERATGFG 426
Query: 532 CEAVDPVDVAAVSTTVRRALATYGTQALAEMMK---NGMAQDLSWKGPAKKW 580
+ P A+ T++RAL Y Q EM+K M Q+ SW+ A+++
Sbjct: 427 YQEPTP---EALLITMQRALLFY-LQQPEEMLKVQQRAMQQNFSWEESAQEY 474
|
|
| UNIPROTKB|P0A6U8 glgA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 134/408 (32%), Positives = 208/408 (50%)
Query: 188 RTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSG--PYGKKNVVFVANDWHTSLIPC 245
R G Y D L F+ A +L + SG P+ + +VV A+DWH L P
Sbjct: 90 RPGSPYHDTNL-FAYTDNVLRFA--LLGWVGAEMASGLDPFWRPDVVH-AHDWHAGLAPA 145
Query: 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 305
YL +P AK VF +HN+AYQG F + LP F F+ I G G
Sbjct: 146 YLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLPWSF---FN-IHGLE--FNG 193
Query: 306 RKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQE 362
+ I+++KAG+ +D + VSP YA+E+ + G+E L R+ + G++NG+D +
Sbjct: 194 Q-ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKI 252
Query: 363 WNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA 422
W+P TD + +Y T+ D K K LQ +GL VD +P+ + RL QKG D++
Sbjct: 253 WSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVL 311
Query: 423 AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482
A+P +++ Q+ +LG G +++ YP + ++ +H I+ GAD IL
Sbjct: 312 EALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVIL 371
Query: 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV-DPVDVA 541
+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + + + V V + +
Sbjct: 372 VPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD--CSLENLADGVASGFVFEDSNAW 429
Query: 542 AVSTTVRRALATYGTQALAEMM-KNGMAQDLSWKGPAKKWEETLLNLE 588
++ +RRA + +L + + MA D SW+ AK + E L+
Sbjct: 430 SLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8LL05 | SSG1B_HORVU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7071 | 0.9052 | 0.9805 | N/A | no |
| Q42857 | SSG1_IPOBA | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7126 | 0.9869 | 0.9934 | N/A | no |
| P09842 | SSG1_HORVU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6587 | 0.9460 | 0.9601 | N/A | no |
| Q43784 | SSG1_MANES | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7244 | 0.9852 | 0.9917 | N/A | no |
| P04713 | SSG1_MAIZE | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6701 | 0.9313 | 0.9421 | N/A | no |
| O82627 | SSG1_ANTMA | 2, ., 4, ., 1, ., 2, 1 | 0.7186 | 0.9885 | 0.9950 | N/A | no |
| Q42968 | SSG1_ORYGL | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6737 | 0.9232 | 0.9277 | N/A | no |
| Q43092 | SSG1_PEA | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7229 | 0.9150 | 0.9286 | N/A | no |
| A2Y8X2 | SSG1_ORYSI | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6754 | 0.9232 | 0.9277 | N/A | no |
| Q00775 | SSG1_SOLTU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7149 | 0.9885 | 0.9967 | N/A | no |
| Q43134 | SSG1_SORBI | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6826 | 0.9199 | 0.9259 | N/A | no |
| Q9MAQ0 | SSG1_ARATH | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6878 | 0.9918 | 0.9950 | yes | no |
| P27736 | SSG1_WHEAT | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6285 | 0.9509 | 0.9463 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.4.1.21 | 0.979 |
| 4th Layer | 2.4.1.246 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.4.1 | 0.983 |
| 4th Layer | 2.4.1.242 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 612 | |||
| cd03791 | 476 | cd03791, GT1_Glycogen_synthase_DULL1_like, This fa | 0.0 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 0.0 | |
| PRK00654 | 466 | PRK00654, glgA, glycogen synthase; Provisional | 1e-154 | |
| COG0297 | 487 | COG0297, GlgA, Glycogen synthase [Carbohydrate tra | 1e-124 | |
| PRK14099 | 485 | PRK14099, PRK14099, glycogen synthase; Provisional | 2e-94 | |
| pfam08323 | 234 | pfam08323, Glyco_transf_5, Starch synthase catalyt | 5e-80 | |
| PRK14098 | 489 | PRK14098, PRK14098, glycogen synthase; Provisional | 1e-75 | |
| PLN02939 | 977 | PLN02939, PLN02939, transferase, transferring glyc | 2e-65 | |
| PLN02316 | 1036 | PLN02316, PLN02316, synthase/transferase | 1e-58 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 3e-25 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 2e-14 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-14 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 7e-14 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 7e-13 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 8e-12 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-11 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 2e-11 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 8e-10 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 2e-09 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 7e-09 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 2e-08 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 2e-08 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 7e-08 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 7e-08 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 2e-07 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 2e-07 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 1e-06 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 2e-06 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 3e-06 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 1e-05 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 3e-05 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 3e-05 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 1e-04 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 4e-04 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 4e-04 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 6e-04 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 8e-04 | |
| cd03796 | 398 | cd03796, GT1_PIG-A_like, This family is most close | 0.001 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 0.003 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 0.004 | |
| pfam14172 | 133 | pfam14172, DUF4309, Domain of unknown function (DU | 0.004 |
| >gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 553 bits (1428), Expect = 0.0
Identities = 205/510 (40%), Positives = 284/510 (55%), Gaps = 51/510 (10%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT----DVVI 141
+LFV +EVAP++KTGGLGDV+G LP ALA GH V I P+Y + D +
Sbjct: 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLF 60
Query: 142 ELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFS 201
+ VG + E V F GV F+D+P + + +G DY+DN RF+
Sbjct: 61 GVPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLY-------DDSGYDYEDNAERFA 113
Query: 202 LLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 261
L +AALE R L G K + +DWHT L+P LK Y +K+ K
Sbjct: 114 LFSRAALELLRRL------------GWKPDIIHCHDWHTGLVPALLKEKYADPF-FKNIK 160
Query: 262 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321
VF IHN+AYQG F E L LP + D ++ Y + +N++KAGI+ +D V
Sbjct: 161 TVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQ------VNFLKAGIVYADAV 214
Query: 322 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379
TVSP YA+E+++ E G LD ++ R + GI+NG+D WNP TD ++ Y A
Sbjct: 215 TTVSPTYAREILTPEF-GEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSA-D 272
Query: 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLG 439
++ K K ALQ E+GLPVD + P+ GF+GRL EQKG D+L A+P ++ Q+++LG
Sbjct: 273 DLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILG 332
Query: 440 TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 499
+G E+ L +L YP + + ++ LAH+I AGADF L+PSRFEPCGL Q++AMR
Sbjct: 333 SGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMR 392
Query: 500 YGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553
YGTVPIV +TGGL DTV + TGF F + + A+ +RRALA
Sbjct: 393 YGTVPIVRATGGLADTVIDYNEDTGEGTGF---VF-------EGYNADALLAALRRALAL 442
Query: 554 YGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 582
Y A ++ +N MAQD SW AK++ E
Sbjct: 443 YRDPEAWRKLQRNAMAQDFSWDRSAKEYLE 472
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 539 bits (1392), Expect = 0.0
Identities = 206/517 (39%), Positives = 281/517 (54%), Gaps = 58/517 (11%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW----DTDVV 140
+ +LFV E+AP++KTGGL DV+G LP ALAA GH V + P Y +D +
Sbjct: 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVEL 60
Query: 141 IELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRF 200
++L VG + V+ F GV F+D+P IYG DY DN RF
Sbjct: 61 VDLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLF-----DRPGGIYGD----DYPDNAERF 111
Query: 201 SLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSA 260
+ +AA E L + V A+DWHT+L+P LK +Y+P
Sbjct: 112 AFFSRAAAELLSGLGWQPD------------VVHAHDWHTALVPALLKAVYRPN----PI 155
Query: 261 KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320
K VF IHN+AYQG F +DF L LP ++ + Y + +N++K GI+ +D
Sbjct: 156 KTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL-EFYGR------VNFLKGGIVYADR 208
Query: 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDAS 378
V TVSP YA+E+++ E G LD +++ K GI+NG+D + WNP TD Y+ Y A
Sbjct: 209 VTTVSPTYAREILTPE-FGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSAD 267
Query: 379 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL 438
+ K KEALQ E+GLPVD ++P+ G I RL +QKG D+L AA+P ++ Q++VL
Sbjct: 268 D-LAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL 326
Query: 439 GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAM 498
GTG +E+ L +L YP R + ++ LAH+I AGADFIL+PSRFEPCGL QL+AM
Sbjct: 327 GTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAM 386
Query: 499 RYGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552
RYGTVPIV TGGL DTV +G TGF + D A+ + RAL
Sbjct: 387 RYGTVPIVRRTGGLADTVVDGDPEAESGTGFL----------FEEYDPGALLAALSRALR 436
Query: 553 TYGT--QALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587
Y + KN M+QD SW AK++ E +L
Sbjct: 437 LYRQDPSLWEALQKNAMSQDFSWDKSAKQYVELYRSL 473
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 451 bits (1164), Expect = e-154
Identities = 193/510 (37%), Positives = 255/510 (50%), Gaps = 64/510 (12%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDTDVVIEL 143
+ ILFV +E AP KTGGLGDV+G LP ALAA GH V + P Y ++ D VV L
Sbjct: 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL 60
Query: 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLL 203
+ V F H GV +D P + +G Y DN RF+
Sbjct: 61 DLFT----VLFGHLEGDGVPVYLIDAPHL------------FDRPSGYGYPDNGERFAFF 104
Query: 204 CQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVV 263
AA E F+ + + A+DWHT LIP LK Y Y K V
Sbjct: 105 SWAAAE------------FAEGLDPRPDIVHAHDWHTGLIPALLKEKYWR--GYPDIKTV 150
Query: 264 FCIHNIAYQGRFAFEDFGLLNLPAQ-FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322
F IHN+AYQG F E G L LPA+ F G +I+++KAG+ +D V
Sbjct: 151 FTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYG--------QISFLKAGLYYADRVT 202
Query: 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTV 380
TVSP YA+E+ + E G L+ ++R K GI+NG+D WNP TD + Y A
Sbjct: 203 TVSPTYAREITTPEF-GYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADD- 260
Query: 381 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 440
++ K K ALQ GLP D + P+ + RL EQKG D++ A+P +++ Q+++LGT
Sbjct: 261 LEGKAENKRALQERFGLPDD-DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGT 319
Query: 441 GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY 500
G +E+ L YP K ++ LAH I AGAD L+PSRFEPCGL QL+A+RY
Sbjct: 320 GDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY 379
Query: 501 GTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553
GT+PIV TGGL DTV E TGF F D + + +RRAL
Sbjct: 380 GTLPIVRRTGGLADTVIDYNPEDGEA-TGF---VF-------DDFNAEDLLRALRRALEL 428
Query: 554 YGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 582
Y L + + MAQD SW A+++ E
Sbjct: 429 YRQPPLWRALQRQAMAQDFSWDKSAEEYLE 458
|
Length = 466 |
| >gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 376 bits (967), Expect = e-124
Identities = 186/516 (36%), Positives = 255/516 (49%), Gaps = 63/516 (12%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW--DTDVVIEL 143
ILFV +E+ P+ KTGGL DV+G LP ALA G V + P Y + + W VV +
Sbjct: 2 KILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKF 61
Query: 144 ---KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPR--TGEDYQDNQL 198
K G + + GVD +D+P + T Y DN
Sbjct: 62 GVLKGGRAQLFIVKEYGKDGGVDLYLIDNPAL------------FKRPDSTLYGYYDNAE 109
Query: 199 RFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYK 258
RF+ AA E + L ++V A+DW T L+P YLK + + Y
Sbjct: 110 RFAFFSLAAAE---LAPL------GLISWLPDIVH-AHDWQTGLLPAYLK--QRYRSGYI 157
Query: 259 SAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILES 318
VF IHN+AYQG F + L LP + +SF Y + I+++K G+ +
Sbjct: 158 -IPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLE-FYGQ------ISFLKGGLYYA 209
Query: 319 DMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYD 376
D V TVSP YA E+ + + G L+ ++ K GI+NG+D WNP TD YI Y
Sbjct: 210 DAVTTVSPTYAGEIYT-PEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYS 268
Query: 377 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII 436
A + AK K ALQ +GL VD P+ GF+ RL QKG D+L AI +++ Q++
Sbjct: 269 AEV-LPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLV 327
Query: 437 VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLH 496
+LGTG +E+ L L +P + V ++ PLAH+I AGAD IL+PSRFEPCGL QL+
Sbjct: 328 LLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLY 387
Query: 497 AMRYGTVPIVASTGGLVDTV--------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548
AMRYGT+PIV TGGL DTV + TGF + ++ +R
Sbjct: 388 AMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFL----------FLQTNPDHLANALR 437
Query: 549 RALATYGTQALA--EMMKNGMAQDLSWKGPAKKWEE 582
RAL Y L ++ N M D SW AK++ E
Sbjct: 438 RALVLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVE 473
|
Length = 487 |
| >gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 298 bits (765), Expect = 2e-94
Identities = 181/530 (34%), Positives = 258/530 (48%), Gaps = 91/530 (17%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
L +L V +E+ P KTGGL DV G LP AL A+G V T+ P Y V+ ++
Sbjct: 4 LRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGY--------PAVLAGIE 55
Query: 145 VGDKIEKVR-FFHCHKR-------GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN 196
+++ F R G+D +D P ++ + + GP G+D+ DN
Sbjct: 56 DAEQVHSFPDLFGGPARLLAARAGGLDLFVLDAP----HLYDRPGNPYVGP-DGKDWPDN 110
Query: 197 QLRFSLLCQAALE---------APRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYL 247
RF+ L +AA P I++ A+DW L P YL
Sbjct: 111 AQRFAALARAAAAIGQGLVPGFVPDIVH-------------------AHDWQAGLAPAYL 151
Query: 248 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG---YNKPVR 304
+P VF IHN+A+QG+F E G L LP S+F +DG Y
Sbjct: 152 HYSGRPA-----PGTVFTIHNLAFQGQFPRELLGALGLPP---SAFS-LDGVEYYGG--- 199
Query: 305 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQE 362
I ++KAG+ +D + TVSP YA E + G + G+ LD ++R+ + GI+NG+D
Sbjct: 200 ---IGYLKAGLQLADRITTVSPTYALE-IQGPEAGMGLDGLLRQRADRLSGILNGIDTAV 255
Query: 363 WNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA 422
WNP TD+ I YD T + A+ K ALQA GL D + ++G I RL QKG D+L
Sbjct: 256 WNPATDELIAATYDVET-LAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLL 314
Query: 423 AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482
A+P + E Q+ +LG+G +E + YP + V ++ LAH+I AGAD +L
Sbjct: 315 EALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADALL 374
Query: 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGF-----TGFQMGSFSVDCE 533
+PSRFEPCGL QL A+RYG VP+VA GGL DTV E TG Q
Sbjct: 375 VPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS------- 427
Query: 534 AVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 582
PV A++ +R+ A + + +NGM D+SW+ PA+ +
Sbjct: 428 ---PVTADALAAALRKTAALFADPVAWRRLQRNGMTTDVSWRNPAQHYAA 474
|
Length = 485 |
| >gnl|CDD|219794 pfam08323, Glyco_transf_5, Starch synthase catalytic domain | Back alignment and domain information |
|---|
Score = 251 bits (644), Expect = 5e-80
Identities = 101/262 (38%), Positives = 136/262 (51%), Gaps = 28/262 (10%)
Query: 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVG 146
ILFV +E AP++KTGGL DV+G LP ALA GH V I PRY + + ++
Sbjct: 1 ILFVASECAPFAKTGGLADVVGALPKALAKLGHDVRVIMPRYGFIPEERKQLEEVI-ELY 59
Query: 147 DKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQA 206
V GVD F+D+P + + IYG G DY+DN RF+ +A
Sbjct: 60 VLFGYVGVARLELDGVDVYFLDNPEYFDR------PGIYGD-AGRDYEDNAERFAFFSRA 112
Query: 207 ALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCI 266
ALE R L K +++ +DWHT L+P YLK Y +K+ K VF I
Sbjct: 113 ALELLRKLG-----------WKPDII-HCHDWHTGLVPAYLKEAYADDPFFKNIKTVFTI 160
Query: 267 HNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 326
HN+AYQG F + LL LP IDG +IN++KAGI+ +D V TVSP
Sbjct: 161 HNLAYQGVFPADLLDLLGLPW----EDFSIDGLEFY---GQINFLKAGIVYADAVTTVSP 213
Query: 327 HYAQELVSGEDKGVELDNIIRK 348
YA+E+++ E G LD ++RK
Sbjct: 214 TYAEEILTPEF-GEGLDGLLRK 234
|
Length = 234 |
| >gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 249 bits (637), Expect = 1e-75
Identities = 113/359 (31%), Positives = 192/359 (53%), Gaps = 27/359 (7%)
Query: 236 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 295
+DW+ L+P LKT+Y +K K V IHN+ QG F+ F L LP + S
Sbjct: 148 HDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH- 205
Query: 296 IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKG 353
G ++N + G+ +D++ T SP YA+E+ ++ LD ++ RK + G
Sbjct: 206 -------REGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHG 258
Query: 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 413
I+NG+D ++WNP TDK I +Y +D K K+AL EVGLP D P++G I +
Sbjct: 259 ILNGIDTRQWNPSTDKLIKKRYSIER-LDGKLENKKALLEEVGLPFDEETPLVGVIINFD 317
Query: 414 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473
+ +G+++LA ++ ++ ++Q+++ G+G K EK+ + +PE+ +F H+
Sbjct: 318 DFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHL 377
Query: 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFS 529
IAG D +L+P + E CG++Q+ AM YGT+P+ + GG+V+T+EE +GF ++
Sbjct: 378 AIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYT 437
Query: 530 VDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 587
+ A+ + ALA Y + E++ M +D SWK A+++ + L
Sbjct: 438 PE----------ALVAKLGEALALYHDEERWEELVLEAMERDFSWKNSAEEYAQLYREL 486
|
Length = 489 |
| >gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 230 bits (589), Expect = 2e-65
Identities = 167/528 (31%), Positives = 258/528 (48%), Gaps = 75/528 (14%)
Query: 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD-----QYKDAWDTD 138
GL+I+ + E+AP +K GGL DV+ GL AL GH V + P+YD Q ++ D
Sbjct: 481 GLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLD 540
Query: 139 VVIELKVGDKIEKVRFFHCHKRGVDRVFVD--HPWFLAKVWGKTQSKIYGPRTGEDYQDN 196
VV+E + K + + G+ F++ HP +K + + Q YG D+
Sbjct: 541 VVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHP---SKFFWRAQ--YYGE------HDD 589
Query: 197 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLI-PCYLKTMYKPKG 255
RFS +AALE L S GKK + +DW T+ + P Y +Y PKG
Sbjct: 590 FKRFSYFSRAALE----LLYQS--------GKKPDIIHCHDWQTAFVAPLYWD-LYAPKG 636
Query: 256 MYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR-----KINW 310
+ SA++ F HN YQG D L + ++P R + +IN
Sbjct: 637 -FNSARICFTCHNFEYQGTAPASDLASCGLD---------VHQLDRPDRMQDNAHGRINV 686
Query: 311 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKY 370
+K I+ S++V TVSP YAQE+ S +G++ GI+NG+D WNP TD++
Sbjct: 687 VKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRF 746
Query: 371 IGVKYDASTVMDAKPLLKEALQAEVGLP-VDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 429
+ V+Y+A+ + K K AL+ ++GL D + P++G I RL QKG ++ AI
Sbjct: 747 LKVQYNAND-LQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTA 805
Query: 430 KENVQIIVLGTGKKP-MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPSR 486
+ Q ++LG+ P ++++ E + + R + K++ L+H I A +D +IPS
Sbjct: 806 ELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSM 865
Query: 487 FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP--------- 537
FEPCGL Q+ AMRYG+VPIV TGGL D+V F D E +
Sbjct: 866 FEPCGLTQMIAMRYGSVPIVRKTGGLNDSV-----------FDFDDETIPVELRNGFTFL 914
Query: 538 -VDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 582
D +++ + RA Y + ++++ M D SW A ++EE
Sbjct: 915 TPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEE 962
|
Length = 977 |
| >gnl|CDD|215180 PLN02316, PLN02316, synthase/transferase | Back alignment and domain information |
|---|
Score = 212 bits (540), Expect = 1e-58
Identities = 156/522 (29%), Positives = 234/522 (44%), Gaps = 104/522 (19%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
++I+ + E+AP +K GGLGDV+ L A+ H V I P+YD + D+ +
Sbjct: 588 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRS 647
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVD--HPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSL 202
+++ + G+ F++ + F A +YG R ++ RF
Sbjct: 648 YSWGGTEIKVWFGKVEGLSVYFLEPQNGMFWAGC-------VYGCR------NDGERFGF 694
Query: 203 LCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKV 262
C AALE F G + +DW ++ + K Y G+ K A+V
Sbjct: 695 FCHAALE------------FLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSK-ARV 741
Query: 263 VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322
VF IHN+ +FG N + + +D
Sbjct: 742 VFTIHNL---------EFG--------------------------ANHIGKAMAYADKAT 766
Query: 323 TVSPHYAQELVSGEDKGVELDNIIRKTG-IKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 381
TVSP Y++E VSG I GI+NG+D W+P D +I V Y + V+
Sbjct: 767 TVSPTYSRE-VSGNSA------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV 819
Query: 382 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 441
+ K KEALQ +GL ++P++G I RL QKG ++ AI ++ N Q+++LG+
Sbjct: 820 EGKRAAKEALQQRLGLK-QADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSA 878
Query: 442 KKPMEKQ-----LEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLH 496
P + QL + ++AR ++ PL+H+I AGADFIL+PS FEPCGL QL
Sbjct: 879 PDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLT 938
Query: 497 AMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD-------CEAVDP-------VDVAA 542
AMRYG++P+V TGGL DTV F VD + ++P D A
Sbjct: 939 AMRYGSIPVVRKTGGLFDTV-----------FDVDHDKERAQAQGLEPNGFSFDGADAAG 987
Query: 543 VSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 582
V + RA++ + G + K M QD SW PA + E
Sbjct: 988 VDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYME 1029
|
Length = 1036 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 3e-25
Identities = 82/356 (23%), Positives = 132/356 (37%), Gaps = 95/356 (26%)
Query: 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS 291
V A+DW L + +V +H +
Sbjct: 88 VVHAHDWLALLAAALAARLLG-------IPLVLTVHGLE--------------------- 119
Query: 292 SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGI 351
F + + + +D ++ VS +EL E GV + I
Sbjct: 120 -FGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELR--ELGGVPPEKITV---- 172
Query: 352 KGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGR 411
I NG+D + + P A + +G+P D PVI F+GR
Sbjct: 173 --IPNGVDTERFRPAPR---------------------AARRRLGIPEDE--PVILFVGR 207
Query: 412 LEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--- 466
L +KG D+L A+ KE +V+++++G G P+ ++LE L G+
Sbjct: 208 LVPRKGVDLLLEALAKLRKEYPDVRLVIVGDG--PLREELEALA-----AELGLGDRVTF 260
Query: 467 --NIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFT 521
+P + A AD ++PS +E GL+ L AM G P+VAS GG+ + VE+G T
Sbjct: 261 LGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDVGGIPEVVEDGET 319
Query: 522 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM-KNG---MAQDLSW 573
G V P D A++ + R L L + + +A+ SW
Sbjct: 320 GL----------LVPPGDPEALAEAILRLLD---DPELRRRLGEAARERVAERFSW 362
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 2e-14
Identities = 70/297 (23%), Positives = 118/297 (39%), Gaps = 63/297 (21%)
Query: 297 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356
D P + ++ + +D V+ VS A EL + I + I N
Sbjct: 128 DVNLLPRKRLLRALLRRALRRADAVIAVSEALADELKA---------LGIDPEKVTVIPN 178
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 416
G+D + ++P A ++GLP D+ VI F+GRL +K
Sbjct: 179 GVDTERFSPA---------------------DRAEARKLGLPEDK--KVILFVGRLVPRK 215
Query: 417 GSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-------- 466
G D L A+ +K+ +V ++++G G P+ + LE L G+
Sbjct: 216 GIDYLIEALARLLKKRPDVHLVIVGDG--PLREALEAL-----AAELGLEDRVTFLGAVP 268
Query: 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQM 525
+ + A AD ++PS E GL+ L AM G P+VA+ GG+ + + +G G
Sbjct: 269 HEEVP-AYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGGIPEIITDGENGLL- 325
Query: 526 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 582
V P D A++ + R LA + + + SW+ A++ E
Sbjct: 326 ---------VPPGDPEALAEAILRLLADPWLRLGRAARRRVAER-FSWENVAERLLE 372
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 75.0 bits (183), Expect = 2e-14
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 394 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQ 451
+GL + V+ ++GRL+ +KG D+L A K +++++++G G + E+ +
Sbjct: 190 RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKL 249
Query: 452 LEILYPEKARGVAKFNIPLAH----MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 507
+ L E KF + ++A AD ++PS E GL+ L AM GT I +
Sbjct: 250 AKKLGLED---NVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIAS 306
Query: 508 STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-QALAEMMKNG 566
GG+ + VE+G TG V P DV ++ + + L + L E +
Sbjct: 307 DVGGIPEVVEDGETGL----------LVPPGDVEELADALEQLLEDPELREELGEAARER 356
Query: 567 MAQDLSWKGPAKKWEETLLNL 587
+ ++ SW+ A++ E L
Sbjct: 357 VEEEFSWERIAEQLLELYEEL 377
|
Length = 381 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 7e-14
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 463
P+I F+GRL +KG D+L A +++ + ++ G EK+L++L + + +
Sbjct: 3 PIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLGLEDNVI 62
Query: 464 AKFNIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT 521
+P +I AD ++PSR+E GL+ L AM G I GG + V++G T
Sbjct: 63 FVGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIATDVGGPAEIVKDGET 122
Query: 522 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552
G VDP D A++ + + L
Sbjct: 123 GL----------LVDPGDAEALAEAIEKLLK 143
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 7e-13
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQ---IIVLGTGKKP 444
EA +A + D+ P I +GRL+ +KG D L A + + +IV G
Sbjct: 207 AEARRARLLRDPDK--PRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDI 264
Query: 445 MEKQLEQLEILYPEKARGVA-KFNIPLAH------MIIAGADFILIPSRFEPCGLIQLHA 497
+ E+L L + GV + + P + AD + P+ +EP GL L A
Sbjct: 265 LAMDEEELREL--ARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEA 322
Query: 498 MRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552
M G P+VA+ GG D V +G TG VDP D A++ +RR L
Sbjct: 323 MACGL-PVVATAVGGPRDIVVDGVTGL----------LVDPRDPEALAAALRRLLT 367
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 8e-12
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 22/202 (10%)
Query: 339 GVELDNIIRKTGIK------GIVNGM--DVQEWNP-LTDKYIGVKYDASTVMDAKPLLKE 389
G +L + KT I+ + GM D+ ++ P L + + V Y+ + KP
Sbjct: 130 GYKLSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGN 189
Query: 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQL 449
+ G +DR+ P I F+GR+ QKG L A+ H+I ++VQ+ VL G +
Sbjct: 190 VVLDRYG--IDRSRPYILFVGRITRQKGVPHLLDAV-HYIPKDVQV-VLCAGAPDTPEVA 245
Query: 450 EQLEILYPEKAR---GVAKFN----IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 502
E++ R G+ N +++ A+ + PS +EP G++ L AM GT
Sbjct: 246 EEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT 305
Query: 503 VPIVAS-TGGLVDTVEEGFTGF 523
P+VAS TGG+ + V +G TGF
Sbjct: 306 -PVVASATGGIPEVVVDGETGF 326
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 1e-11
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 408 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF- 466
F+GRL +KG D L A + + ++ G P + LE+L R V
Sbjct: 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDR-VIFLG 167
Query: 467 ---NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 523
L +++A AD ++PS E GL+ L AM G I GG + VE+G TG
Sbjct: 168 GLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGL 227
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 2e-11
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 39/219 (17%)
Query: 387 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLG--TGK 442
+ L+ ++ + D V+ + GR+ KG +L A N++++V+G T
Sbjct: 179 PQPNLRQQLNISPDET--VLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTAS 236
Query: 443 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG-------------ADFILIPSRF-E 488
EK Q ++L K G I+ G AD +++PS+ E
Sbjct: 237 SKGEKAAYQKKVLEAAKRIG--------DRCIMLGGQPPEKMHNYYPLADLVVVPSQVEE 288
Query: 489 PCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547
++ + AM G P++AST GG+ + V EG TG+ + +P+ ++ + +
Sbjct: 289 AFCMVAVEAMAAGK-PVLASTKGGITEFVLEGITGYHLA---------EPMTSDSIISDI 338
Query: 548 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586
R LA +AE K+ + SW+G +++EE + N
Sbjct: 339 NRTLADPELTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377
|
Length = 380 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 8e-10
Identities = 47/196 (23%), Positives = 78/196 (39%), Gaps = 40/196 (20%)
Query: 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGK 442
++ + + L + + PVI +GRL QKG D L A KE + ++++LG G
Sbjct: 171 EEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDG- 229
Query: 443 KPMEKQLEQLEILYPEKARGVAKFNI------------PLAHMIIAGADFILIPSRFEPC 490
P+ ++LE L + + P ++ AD ++ SR+E
Sbjct: 230 -PLREELEAL----------AKELGLADRVHFLGFQSNPYPYL--KAADLFVLSSRYEGF 276
Query: 491 GLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549
+ L AM GT P+VA+ G + +E+G G V D AA++
Sbjct: 277 PNVLLEAMALGT-PVVATDCPGPREILEDGENGL----------LVPVGDEAALAAAALA 325
Query: 550 ALATYGTQALAEMMKN 565
L L E +
Sbjct: 326 LLDLLLDPELRERLAA 341
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 2e-09
Identities = 53/191 (27%), Positives = 75/191 (39%), Gaps = 34/191 (17%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHF-IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462
PV+ ++GRL +K + L A + V+++++G G P +LE YP
Sbjct: 198 PVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDG--PARARLEAR---YPN---- 248
Query: 463 VAKFNIPLAH----MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVE 517
F L A AD + PSR E GL+ L AM G +P+VA GG D V
Sbjct: 249 -VHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASG-LPVVAPDAGGPADIVT 306
Query: 518 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPA 577
+G G V+P D A + + LA MA +
Sbjct: 307 DGENGL----------LVEPGDAEAFAAALAALLAD-PELRRR------MAARARAEAER 349
Query: 578 KKWEETLLNLE 588
+ WE L NL
Sbjct: 350 RSWEAFLDNLL 360
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 7e-09
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 398 PVDRNIPVIGFIGRLEEQKGSDIL--AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL 455
P+ + PV F+ RL + KG D L AA I NV+++++G G + + ++E L
Sbjct: 183 PIPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKL 242
Query: 456 YPEKARGVAKF-----NIPLAHMIIAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVAS 508
G +F ++P ++A AD ++PS E P L++ AM G P++A+
Sbjct: 243 ---GLEGRVEFLGFRDDVP---ELLAAADVFVLPSYREGLPRVLLE--AMAMG-RPVIAT 293
Query: 509 -TGGLVDTVEEGFTGF 523
G + V +G GF
Sbjct: 294 DVPGCREAVIDGVNGF 309
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE----NVQIIVLGTGKKPMEK 447
+A +GLP+D V+ F+GR++ K D+L A+ + N+++IV+G
Sbjct: 210 RARLGLPLDT--KVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLA 267
Query: 448 QLEQLEILYPEKARGVAK---FNIP-----LAHMIIAGADFILIPSRFEPCGLIQLHAMR 499
+ L L E G+A F P L H+ A AD + +PS E GL+ + A
Sbjct: 268 TPDALIELAAE--LGIADRVRFLPPRPPEELVHVYRA-ADVVAVPSYNESFGLVAMEAQA 324
Query: 500 YGTVPIVASTGGLVDTVEEGFTGF 523
GT + A GGL V +G TG
Sbjct: 325 CGTPVVAARVGGLPVAVADGETGL 348
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 57/199 (28%)
Query: 408 FIGRLEEQKGSDIL--AAAIPHFIKENVQIIVLGTGKKPMEKQLEQL--------EILYP 457
+GRL QKG D+L A A + ++ ++G G P + LE L ++
Sbjct: 183 AVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDG--PEREALEALIKELGLEDRVILL 240
Query: 458 EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS--TGGLVDT 515
+ + ++ A A ++ SRFE ++ L AM +G +P+++ G +
Sbjct: 241 GFTKNIEEY--------YAKASIFVLTSRFEGFPMVLLEAMAFG-LPVISFDCPTGPSEI 291
Query: 516 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--------- 566
+E+G G V DV ALA +AL +M++
Sbjct: 292 IEDGVNGL----------LVPNGDVE--------ALA----EALLRLMEDEELRKRMGAN 329
Query: 567 ---MAQDLSWKGPAKKWEE 582
A+ S + K+WEE
Sbjct: 330 ARESAERFSIENIIKQWEE 348
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 7e-08
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 464
GFIG+L KG D+L A + +++++++G G + E+ +LE + G
Sbjct: 193 RFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESY-ELEGDPRVEFLGAY 251
Query: 465 KFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 523
A D +++PS + E L+ A+ G I + GG+ + V +G G
Sbjct: 252 PQEEIDDFY--AEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGL 309
Query: 524 QMGSFSVDCEAVDPVDVAAV 543
F D D+AA
Sbjct: 310 ---LFPPG----DAEDLAAA 322
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 7e-08
Identities = 44/176 (25%), Positives = 67/176 (38%), Gaps = 39/176 (22%)
Query: 382 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL---AAAIPHFIKENVQIIVL 438
D + E P F+GRL KG D+L AAA+P + ++++
Sbjct: 170 DPARYPRPDALEEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP-----DAPLVIV 224
Query: 439 GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI--------IAGADFILIPS--RFE 488
G G P+E +LE L G+ + + +A D + PS R E
Sbjct: 225 GEG--PLEAELEALAAAL-----GLLD-RVRFLGRLDDEEKAALLAACDVFVFPSVERSE 276
Query: 489 PCGLIQLHAMRYGTVPIVAS--TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542
G++ L AM +G P++++ G G TG V P D AA
Sbjct: 277 AFGIVLLEAMAFG-KPVISTEIGTGGSYVNLHGVTGL----------VVPPGDPAA 321
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 31/207 (14%)
Query: 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA---AAIPHFIKENVQIIVLGTGKKP 444
+ P+ + +I F+GRL +KG D+L A + + +++ G +
Sbjct: 188 LPSRGRRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAE-RFPDWHLVIAGPDEGG 246
Query: 445 MEKQLEQLEILYPEKARGVAK---FNIPLAHMIIAG----ADFILIPSRFEPCGLIQLHA 497
+L+Q+ A G+ F L A AD ++PS E G++ A
Sbjct: 247 YRAELKQI-----AAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEA 301
Query: 498 MRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYG 555
+ GT P+V + + +E G C V DV A++ +RRAL
Sbjct: 302 LACGT-PVVTTDKVPWQELIEYG------------CGWVVDDDVDALAAALRRALELPQR 348
Query: 556 TQALAEMMKNGMAQDLSWKGPAKKWEE 582
+A+ E + + + SW A++ E
Sbjct: 349 LKAMGENGRALVEERFSWTAIAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKAR 461
PV+ ++GRL ++K D L A +KE +V+++++G G P ++LE+L +
Sbjct: 203 PVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDG--PEREELEEL-----AREL 255
Query: 462 GVAKF----------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STG 510
G+A +P + AD + S E GL+ L AM G P+VA
Sbjct: 256 GLADRVIFTGFVPREELPDYY---KAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAP 311
Query: 511 GLVDTVEEGFTGF 523
GL D V +G GF
Sbjct: 312 GLPDLVADGENGF 324
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 1e-06
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 45/205 (21%)
Query: 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 413
I NG+D + P K ++ L GLP D+ I + G +G +
Sbjct: 164 IPNGIDTTIFRPR----------------DKREARKRL----GLPADKKIILFGAVGGTD 203
Query: 414 EQKGSDILAAA---IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN--I 468
+KG D L A + K++++++V G + L P + N
Sbjct: 204 PRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPPDL-------PFPVHYLGSLNDDE 256
Query: 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGS 527
LA +I + AD ++PS E + A+ GT P+VA GG+ D V+ G TG+
Sbjct: 257 SLA-LIYSAADVFVVPSLQENFPNTAIEALACGT-PVVAFDVGGIPDIVDHGVTGY---- 310
Query: 528 FSVDCEAVDPVDVAAVSTTVRRALA 552
P D ++ + LA
Sbjct: 311 ------LAKPGDPEDLAEGIEWLLA 329
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 48/173 (27%), Positives = 70/173 (40%), Gaps = 31/173 (17%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQL--EILYPEK 459
P I F+GR E+KG +L A + V+++++G G P+ LE L + +
Sbjct: 189 PRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDG--PLLAALEALARALGLGGR 246
Query: 460 AR--GVAKFNIPLAHMIIAGADFILIPSRFEP------CGLIQLHAMRYGTVPIVAS-TG 510
G M A L PS P ++ L A G VP+VA+ G
Sbjct: 247 VTFLGAQPHAEVRELM--RRARIFLQPSVTAPSGDAEGLPVVLLEAQASG-VPVVATRHG 303
Query: 511 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 563
G+ + VE+G TG V DVAA++ + R LA L M
Sbjct: 304 GIPEAVEDGETGL----------LVPEGDVAALAAALGRLLA---DPDLRARM 343
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 3e-06
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 33/135 (24%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKAR 461
+I F+GRL+E KG D L A +K+ N +++++G G Y +
Sbjct: 228 KIILFVGRLDEIKGVDYLIEAFKIVLKKDPNCRLVIVGDGD-------------YSRYLQ 274
Query: 462 GVAKFNIPLAHMIIAG-------------ADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508
K + + G AD ++PS E C + + M +G +P++ +
Sbjct: 275 ECKKI---WSKITFTGKLDKEKLYELYQIADVGVLPSFHEQCSYVAIEMMMHG-LPLIGT 330
Query: 509 TG-GLVDTVEEGFTG 522
T GL + +E+G G
Sbjct: 331 TSTGLSEMIEDGLNG 345
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 1e-05
Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Query: 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKE---NVQIIVLGTGKKPMEKQLEQLEIL-YP 457
I IG G G L +++ +V++ ++G+G + + + + L +
Sbjct: 1 GIVFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGPEELARLAPNVHFLGFV 60
Query: 458 EKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTV 516
E + +A AD L P RF L L A+ G P+VA+ G
Sbjct: 61 EDLAAL-----------LASADVALAPLRFGAGSPLKLLEALAAGL-PVVATDIGAEGLP 108
Query: 517 EEGFTGF 523
E+ G
Sbjct: 109 EDLGWGV 115
|
Length = 134 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 3e-05
Identities = 50/221 (22%), Positives = 81/221 (36%), Gaps = 43/221 (19%)
Query: 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 413
I NG+D + ++P D + L+ E+GLP + +IG + RL
Sbjct: 164 IPNGVDTERFSPDLDA------------------RARLREELGLP--EDTFLIGIVARLH 203
Query: 414 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473
QK L A +K+ +L G P LE L + + +
Sbjct: 204 PQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKE-LGLEDKVILLGERSDV 262
Query: 474 --IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSV 530
++ D ++ S E + L AM G +P+VA+ G + V + TGF
Sbjct: 263 PALLNALDVFVLSSLSEGFPNVLLEAMACG-LPVVATDVGDNAELVGD--TGF------- 312
Query: 531 DCEAVDPVDVAAVSTTVRRALA------TYGTQALAEMMKN 565
V P D A++ + LA G A + +N
Sbjct: 313 ---LVPPGDPEALAEAIEALLADPALRQALGEAARERIEEN 350
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 3e-05
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 56/222 (25%)
Query: 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGV 373
I +SD V VS +E EL +I + I+ I N +D +
Sbjct: 141 SIEKSDGVTAVSESLKEETY-------ELFDIDKP--IEVIPNFVDTDRY---------- 181
Query: 374 KYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI---GF--IGRLEEQKGSDILAAAIPHF 428
+ AL+ ++G P D + +I F + R+E D++ +
Sbjct: 182 ----------RRKNDPALKRKLGAPEDEKV-LIHISNFRPVKRVE-----DVIE--VFAR 223
Query: 429 IKENV--QIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKF--NIPLAHMIIAGADFIL 482
+++ V +++++G G + P E+ + +L + F +++ +D L
Sbjct: 224 VQQEVPAKLLLVGDGPERSPAEQLVRELGL------TDRVLFLGKQDDVAELLSISDLFL 277
Query: 483 IPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGF 523
+PS E GL L AM G VP++AS GG+ + VE G TGF
Sbjct: 278 LPSEKESFGLAALEAMACG-VPVIASNAGGIPEVVEHGVTGF 318
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 36/210 (17%)
Query: 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIV 437
V D E+L+A GL PV+ G L KG ++L A+P + + +V+++V
Sbjct: 165 VPDPPAEPPESLKALGGLD---GRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLV 221
Query: 438 LGTGKKPMEKQLEQLEILYPEKAR-GVAK---FN---IPLA--HMIIAGADFILIPSRFE 488
G + Y R G+A F +P + + AD +++P R
Sbjct: 222 AG---ETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSA 278
Query: 489 PC---GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545
G++ A+ +G P++++ G + V +G TG V P D AA++
Sbjct: 279 DQTQSGVLAY-AIGFG-KPVISTPVGHAEEVLDGGTGL----------LVPPGDPAALAE 326
Query: 546 TVRRALATYGTQALAEMMKNG--MAQDLSW 573
+RR LA + + A+ +SW
Sbjct: 327 AIRRLLADP--ELAQALRARAREYARAMSW 354
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 4e-04
Identities = 57/376 (15%), Positives = 106/376 (28%), Gaps = 95/376 (25%)
Query: 153 RFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK-----IYGPRTGEDYQDNQLRFSLLCQAA 207
G+ R + L + K + + G LL
Sbjct: 8 FLASRRPTGIGRYARE----LLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPR 63
Query: 208 LEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIH 267
+L L + P + VV IH
Sbjct: 64 RLLWGLLFLLRAGDRLLLLLLGLDLL----HSPHNTA--------PLLRLRGVPVVVTIH 111
Query: 268 NIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 327
++ F + ++ R ++ + +D ++TVS
Sbjct: 112 DLIP---------------------LRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEA 150
Query: 328 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM------ 381
++L+ +Y+GV D V+
Sbjct: 151 TKRDLL-----------------------------------RYLGVPPDKIVVIPLGVDP 175
Query: 382 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLG 439
+P EA + R P ++G +E +K + L A + + +++++G
Sbjct: 176 RFRPPPAEAEVLRALYLLPR--PYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVG 233
Query: 440 TGKKPMEKQLEQLEILYPEKARGVAKF--NIPLAHM--IIAGADFILIPSRFEPCGLIQL 495
E+ L +L L +F + + + GA + PS +E GL L
Sbjct: 234 KRGWLNEELLARLREL---GLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVL 290
Query: 496 HAMRYGTVPIVASTGG 511
AM GT P++AS
Sbjct: 291 EAMACGT-PVIASNIS 305
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 523
+++ AD L+PS E GL L AM G + ++ GG+ + V+ G TGF
Sbjct: 267 LLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGF 316
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 6e-04
Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 43/197 (21%)
Query: 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQI---IVLGTGKKPM 445
E P + ++ +GRL E+KG D L A+ + IV G G P+
Sbjct: 166 ERFPPRPPPPPGEPLRIL-SVGRLVEKKGLDYLLEALALLKDRGIDFRLDIV-GDG--PL 221
Query: 446 EKQLEQLEILYPEKARGVAKFNIPL-----AHMIIA---GAD-FILIPSRFEPCGLIQ-- 494
+LE L G+ + L + AD F+L PS G +
Sbjct: 222 RDELEAL-----IAELGLED-RVTLLGAKSQEEVRELLRAADLFVL-PSVTAADGDREGL 274
Query: 495 ----LHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549
+ AM G +P++++ G+ + VE+G TG V P D A++ + R
Sbjct: 275 PVVLMEAMAMG-LPVISTDVSGIPELVEDGETGL----------LVPPGDPEALADAIER 323
Query: 550 ALATYGTQALAEMMKNG 566
L + EM + G
Sbjct: 324 LLDD--PELRREMGEAG 338
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 8e-04
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 26/133 (19%)
Query: 405 VIGFIGRLEEQKGSDILAAAIPHF------IKENVQIIVLGTGKKPMEKQLEQLEILYPE 458
V+G +GRL+ K L A E ++++++G G P EQ+
Sbjct: 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDG--PARGACEQMV----- 248
Query: 459 KARGVA--------KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-T 509
+A G+A + ++P ++ D ++PS E L AM G +P++A+
Sbjct: 249 RAAGLAHLVWLPGERDDVP---ALMQALDLFVLPSLAEGISNTILEAMASG-LPVIATAV 304
Query: 510 GGLVDTVEEGFTG 522
GG + V+ G TG
Sbjct: 305 GGNPELVQHGVTG 317
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.001
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQ 451
D + I I RL +KG D+L IP K NV+ I+ G G P LE+
Sbjct: 190 DNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDG--PKRILLEE 241
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.003
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD--ILAAAIPHFIKE---NVQIIVLGTGK 442
+ L P+ + PVI GRL KG + I A A +K+ +V ++++G +
Sbjct: 170 ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR---LKKDDPDVHLLIVGDAQ 226
Query: 443 KPMEKQLEQLEILYPEKARGVAKF-----NIPLAHMIIAGADFILIPS-RFEPCGLIQLH 496
E LE++ + F ++P A+ + AD ++ S E G +
Sbjct: 227 GRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYAL---ADIVVSASTEPEAFGRTAVE 283
Query: 497 AMRYGTVPIVASTGGLVDTVEEGFTGF 523
A G I + GG +TV G TG
Sbjct: 284 AQAMGRPVIASDHGGARETVRPGETGL 310
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 37/176 (21%)
Query: 404 PVIGFIGRLEEQKGSDILA---AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKA 460
P+I ++GRL +K D L +P ++ +G G P ++LE++
Sbjct: 264 PLIVYVGRLGAEKNLDFLKRVMERLP-----GARLAFVGDG--PYREELEKM-------- 308
Query: 461 RGVAKFNIPLAHMI--------IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGG 511
A M+ A D ++PS E G + L AM G VP+VA+ GG
Sbjct: 309 --FAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGG 365
Query: 512 LVDTV---EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 564
+ D + +EG TGF VD + V+ ++ +R G A E+ K
Sbjct: 366 IPDIIPPDQEGKTGFLYTPGDVD-DCVEKLETLLADPELR---ERMGAAAREEVEK 417
|
Length = 465 |
| >gnl|CDD|222577 pfam14172, DUF4309, Domain of unknown function (DUF4309) | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.004
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 17/89 (19%)
Query: 120 RVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG- 178
+A +D Y ++ G +I ++R F + G+ + K G
Sbjct: 38 SPDYVANAFDLYATYMGPNLAFGYNKGGQIFEIRSFDTNLEGI------TLKEIKKQLGE 91
Query: 179 -------KTQSKIYGPRTGEDYQDNQLRF 200
KT KIY + G+DY +L F
Sbjct: 92 PDSVVTTKTDEKIYVYKVGKDY---ELLF 117
|
This family includes the B. subtilis YjgB protein, which is functionally uncharacterized. This is not a homologue of E. coli YjgB. Expression of B. subtilis YjgB is regulated by the alternative transcription factor sigma-B. This family is found in bacteria, and is approximately 140 amino acids in length. Length = 133 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 612 | |||
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 100.0 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.97 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.97 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.97 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.96 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.96 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.96 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.96 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.95 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.94 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.94 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.93 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.92 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.92 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.91 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.9 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.9 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.88 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.88 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.87 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.87 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.87 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.87 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.84 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.84 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.78 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.77 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.77 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.76 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.75 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.75 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.72 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.68 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.6 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.58 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.53 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.49 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.48 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.47 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 99.4 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.38 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.34 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.33 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.32 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.19 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 99.15 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 99.14 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.12 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.11 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.09 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 99.08 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 99.07 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 98.96 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.85 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.66 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.56 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.54 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.53 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.47 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.44 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.41 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.4 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.29 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.11 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.08 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.05 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 97.98 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 97.95 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.89 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.87 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 97.87 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.78 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 97.77 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.55 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.31 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 97.17 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.02 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 96.93 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 96.9 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 96.87 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 96.81 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 96.69 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 96.41 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 96.37 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 96.06 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 95.36 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 94.96 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 94.81 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 94.68 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 94.62 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 93.32 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 92.68 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 92.62 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 92.47 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 92.46 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 92.05 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 91.97 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 90.56 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 90.32 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 90.15 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 89.75 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 89.11 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 88.9 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 88.79 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 88.16 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 87.94 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 87.78 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 87.73 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 87.51 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 86.76 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 86.34 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 86.23 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 85.62 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 85.25 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 85.17 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 85.09 | |
| PLN02208 | 442 | glycosyltransferase family protein | 84.4 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 84.3 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 83.97 | |
| KOG0780 | 483 | consensus Signal recognition particle, subunit Srp | 82.8 | |
| PF10093 | 374 | DUF2331: Uncharacterized protein conserved in bact | 82.29 | |
| PF02951 | 119 | GSH-S_N: Prokaryotic glutathione synthetase, N-ter | 82.05 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 81.39 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 81.36 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 80.8 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 80.64 | |
| PLN02764 | 453 | glycosyltransferase family protein | 80.44 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 80.15 |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-69 Score=604.10 Aligned_cols=467 Identities=33% Similarity=0.562 Sum_probs=393.4
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCcccccc-C-c---cEEEEEEeCCeeeEEEEEE
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW-D-T---DVVIELKVGDKIEKVRFFH 156 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~-~-~---~~~~~~~~~~~~~~~~~~~ 156 (612)
.++|||+||++|+.|++++||++++++.|+++|++.||+|.||+|.|+.....+ . . ........++....++++.
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~ 558 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEE
Confidence 458999999999999999999999999999999999999999999998765321 1 1 1122223333344578888
Q ss_pred eeecCceEEEEeCc---cccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEE
Q 007212 157 CHKRGVDRVFVDHP---WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVF 233 (612)
Q Consensus 157 ~~~~gv~~~~v~~~---~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi 233 (612)
...+||++||++++ .|+.+ ..+|+ +.|+..||.+||+++++++..+++ +|| ||
T Consensus 559 ~~~~GV~vyfId~~~~~~fF~R------~~iYg------~~Dn~~RF~~FsrAaLe~~~~~~~-----------~PD-II 614 (977)
T PLN02939 559 GTVEGLPVYFIEPQHPSKFFWR------AQYYG------EHDDFKRFSYFSRAALELLYQSGK-----------KPD-II 614 (977)
T ss_pred EEECCeeEEEEecCCchhccCC------CCCCC------CccHHHHHHHHHHHHHHHHHhcCC-----------CCC-EE
Confidence 88899999999853 26665 56886 679999999999999999998765 499 59
Q ss_pred EeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHH
Q 007212 234 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 313 (612)
Q Consensus 234 ~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 313 (612)
|||||++++++.+++..+...+ +.++|+||||||+.|||.|+...+..+|++....... +++... +...+|++|.
T Consensus 615 H~HDW~TaLV~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~---d~le~~-~~~~iN~LK~ 689 (977)
T PLN02939 615 HCHDWQTAFVAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRP---DRMQDN-AHGRINVVKG 689 (977)
T ss_pred EECCccHHHHHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccCh---hhhhhc-cCCchHHHHH
Confidence 9999999998666555454444 3688999999999999999888887788886654322 222111 2357899999
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
++..||.|+|||+.+++++.. .+|..++..+ +..++.+|+||||.+.|+|..+++|..+|+..++ .+|..++..+
T Consensus 690 GIv~AD~VtTVSptYA~EI~t--e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl-~GK~~nK~aL 766 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRS--EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDL-QGKAANKAAL 766 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHH--HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhh-hhhhhhhHHH
Confidence 999999999999999999986 4565555554 3469999999999999999999999999999997 6899999999
Q ss_pred HHHhCCCCC-CCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-hhHHHHHHHHHHHCC--CceEEEeccC
Q 007212 392 QAEVGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYP--EKARGVAKFN 467 (612)
Q Consensus 392 ~~~~gl~~~-~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~--~~v~~~~~~~ 467 (612)
++++|++.+ ++.++|+|+||+.++||++.+++|+..+.+.+++|+|+|+|+ ..+++.+++++.+++ ++|.+.+.++
T Consensus 767 RkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~d 846 (977)
T PLN02939 767 RKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYD 846 (977)
T ss_pred HHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccC
Confidence 999999864 467899999999999999999999998877789999999996 466788888888774 5799999999
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec---------CcceEEecccccccccCCCC
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---------GFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---------g~~G~~~~~~~~~~~~v~~~ 538 (612)
....+.+|++||++|+||++||||++++|||+||+|||++++||+.|+|.+ +.+||+| ++.
T Consensus 847 e~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf----------~~~ 916 (977)
T PLN02939 847 EALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF----------LTP 916 (977)
T ss_pred HHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe----------cCC
Confidence 888889999999999999999999999999999999999999999999975 5799987 899
Q ss_pred CHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 539 DVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 539 d~~~la~~i~~ll~~~--~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
|+++|+++|.+++..+ .++.+.+|+++++.++|||+.++++|+++|++++..
T Consensus 917 D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 917 DEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999998733 367889999999999999999999999999999854
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-68 Score=580.20 Aligned_cols=467 Identities=37% Similarity=0.608 Sum_probs=388.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccE-EEEEEeCCeeeEEEEEEeeec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDV-VIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|++|||+||++|+.|++|+||++++++.|+++|+++||+|.|+.|.|++..+...... ...+.+.- ...+++++...+
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLF-GGPARLLAARAG 79 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeC-CceEEEEEEEeC
Confidence 5689999999999999999999999999999999999999999999998865433322 12222110 114677888889
Q ss_pred CceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcc
Q 007212 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHT 240 (612)
Q Consensus 161 gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~ 240 (612)
||+++|++++.|+.+ .+.+|++..|.+|.|+..||.+||++++++++.+... .+||| ||+|||++
T Consensus 80 ~v~~~~~~~~~~f~r-----~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~---------~~pDI-iH~Hdw~~ 144 (485)
T PRK14099 80 GLDLFVLDAPHLYDR-----PGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPG---------FVPDI-VHAHDWQA 144 (485)
T ss_pred CceEEEEeChHhhCC-----CCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccC---------CCCCE-EEECCcHH
Confidence 999999999999886 1248988778899999999999999999998765211 25895 99999999
Q ss_pred cchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCE
Q 007212 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~ 320 (612)
++++.+++.... .++|+|+|+||+.+++.++...+..++++...... ++.. +.+.+++++.++..||.
T Consensus 145 ~l~~~~l~~~~~-----~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~i~~ad~ 212 (485)
T PRK14099 145 GLAPAYLHYSGR-----PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSL----DGVE---YYGGIGYLKAGLQLADR 212 (485)
T ss_pred HHHHHHHHhCCC-----CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCc----hhhh---hCCCccHHHHHHHhcCe
Confidence 999998864211 36899999999999999887777777776654321 1111 12456789999999999
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~ 398 (612)
|+|||+.+++++.. ..+|..++.++ +..++.+|+||+|.+.|+|..++.+..+|+..++ .++..++..+++++|++
T Consensus 213 vitVS~~~a~ei~~-~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~ 290 (485)
T PRK14099 213 ITTVSPTYALEIQG-PEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL-AARAANKAALQARFGLD 290 (485)
T ss_pred eeecChhHHHHHhc-ccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHH-HhHHHhHHHHHHHcCCC
Confidence 99999999999985 23444333333 2358999999999999999999999999998876 57788889999999998
Q ss_pred CCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 399 ~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
.+++.++|+++||+.++||++.+++|++.+.+.+++|+|+|+|+..+++.+++++.++++++..+.+++.+..+.++++|
T Consensus 291 ~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~a 370 (485)
T PRK14099 291 PDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGA 370 (485)
T ss_pred cccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcC
Confidence 76677899999999999999999999999977789999999998778889999988888777666777776666566789
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---------cceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
|++|+||++|+||++++|||+||+|+|++++||+.|+|.++ .+|++| ++.|+++|+++|.+
T Consensus 371 Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~----------~~~d~~~La~ai~~ 440 (485)
T PRK14099 371 DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF----------SPVTADALAAALRK 440 (485)
T ss_pred CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe----------CCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999875 689987 99999999999998
Q ss_pred ---HHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 550 ---ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 550 ---ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++++ ++.+.+|+++++.++|||+.++++|+++|++++..
T Consensus 441 a~~l~~d--~~~~~~l~~~~~~~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 441 TAALFAD--PVAWRRLQRNGMTTDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred HHHHhcC--HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhh
Confidence 4445 67889999999999999999999999999999753
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-67 Score=577.58 Aligned_cols=467 Identities=29% Similarity=0.575 Sum_probs=391.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccc-cC---ccE--EEEEEeCCeeeEEEEEEe
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WD---TDV--VIELKVGDKIEKVRFFHC 157 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~-~~---~~~--~~~~~~~~~~~~~~~~~~ 157 (612)
+|||+||++|+.|++|+||++++++.|+++|+++||+|.|+.|.|....+. +. ... .+.+.+++.....+....
T Consensus 5 ~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (489)
T PRK14098 5 NFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVT 84 (489)
T ss_pred CcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEe
Confidence 499999999999999999999999999999999999999999999987653 21 111 222333333333333333
Q ss_pred ee--cCceEEEEeCccccccccCCCCCcccCCC-CCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEE
Q 007212 158 HK--RGVDRVFVDHPWFLAKVWGKTQSKIYGPR-TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFV 234 (612)
Q Consensus 158 ~~--~gv~~~~v~~~~~~~~~~g~~~~~~y~~~-~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~ 234 (612)
.. .||++++++++.|+.+ ..+|++. .|.||.|+..||.+||++++++++.+.+ +||+ ||
T Consensus 85 ~~~~~~v~~~~~~~~~~f~r------~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~-----------~pDi-iH 146 (489)
T PRK14098 85 ALPSSKIQTYFLYNEKYFKR------NGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGW-----------KPDI-IH 146 (489)
T ss_pred cccCCCceEEEEeCHHHcCC------CCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCC-----------CCCE-EE
Confidence 33 3799999999999987 5799876 6789999999999999999999988765 4895 99
Q ss_pred eCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHH
Q 007212 235 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG 314 (612)
Q Consensus 235 ~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 314 (612)
+|||+++++|.+++..+.....+.++|+|+|+||+.+||.++...+..+ ++......+ . .....++++|.+
T Consensus 147 ~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~------~--~~~~~~n~lk~~ 217 (489)
T PRK14098 147 CHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGL------H--REGDEVNMLYTG 217 (489)
T ss_pred ecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhh------h--hcCCcccHHHHH
Confidence 9999999999999877644444568999999999999998876554433 433321111 1 012467999999
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchhhhh--ccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~--~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
+..||.|+|||+.+++++.+...+|..++.+++ ..++.+|+||+|.+.|+|..++.+..+|+..++ ..|..++..++
T Consensus 218 i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~-~~k~~~k~~l~ 296 (489)
T PRK14098 218 VEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERL-DGKLENKKALL 296 (489)
T ss_pred HHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchh-hhHHHHHHHHH
Confidence 999999999999999999852234444444443 359999999999999999998889999999876 57778899999
Q ss_pred HHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHH
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 472 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 472 (612)
+++|++.+++.++|+++||+.++||++.+++|++++.+.+++|+|+|+|+..+++.+++++.++++++.+.+.++.++++
T Consensus 297 ~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~ 376 (489)
T PRK14098 297 EEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFH 376 (489)
T ss_pred HHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHH
Confidence 99999988788999999999999999999999999987899999999998778899999999888889999999999999
Q ss_pred HHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec----CcceEEecccccccccCCCCCHHHHHHHHH
Q 007212 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~----g~~G~~~~~~~~~~~~v~~~d~~~la~~i~ 548 (612)
.+|++||++++||++|+||++++|||+||+|+|++++||+.|++.+ +.+|++| ++.|+++|+++|.
T Consensus 377 ~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~----------~~~d~~~la~ai~ 446 (489)
T PRK14098 377 LAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF----------HDYTPEALVAKLG 446 (489)
T ss_pred HHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe----------CCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999874 6799987 9999999999999
Q ss_pred HHHHhh-CHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Q 007212 549 RALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 549 ~ll~~~-~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
++++.+ .++.+.+++++++.++|||+.++++|+++|++++
T Consensus 447 ~~l~~~~~~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 447 EALALYHDEERWEELVLEAMERDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred HHHHHHcCHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Confidence 987543 2578888999999999999999999999999886
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-63 Score=549.58 Aligned_cols=459 Identities=45% Similarity=0.772 Sum_probs=393.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccC----ccEEEEEEeCCeeeEEEEEEeeec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWD----TDVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|||++|+.|++|+.++||+++++..|+++|+++||+|+|++|.|+...+.+. ......+.+++....+++++...+
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 8999999999999999999999999999999999999999999998766543 223445667777788889999999
Q ss_pred CceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcc
Q 007212 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHT 240 (612)
Q Consensus 161 gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~ 240 (612)
||++++++++.++.+- ..+|++ ||.++..||.+|+++++++++.+.+ +|| |||+|||++
T Consensus 81 ~v~~~~i~~~~~~~r~-----~~~y~~----~~~d~~~r~~~f~~a~~~~~~~~~~-----------~~D-iiH~hdw~~ 139 (473)
T TIGR02095 81 GVPVYFIDNPSLFDRP-----GGIYGD----DYPDNAERFAFFSRAAAELLSGLGW-----------QPD-VVHAHDWHT 139 (473)
T ss_pred CceEEEEECHHHcCCC-----CCCCCC----CCCCHHHHHHHHHHHHHHHHHhcCC-----------CCC-EEEECCcHH
Confidence 9999999999877641 247865 7899999999999999999987654 489 599999999
Q ss_pred cchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCE
Q 007212 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~ 320 (612)
++++.+++..+... ++|+|+|+|++.++|.++...+..++++..+... ..+. +...+++++.++..||.
T Consensus 140 ~~~~~~l~~~~~~~----~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~~~~ad~ 208 (473)
T TIGR02095 140 ALVPALLKAVYRPN----PIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHM----EGLE---FYGRVNFLKGGIVYADR 208 (473)
T ss_pred HHHHHHHHhhccCC----CCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCc----hhhh---cCCchHHHHHHHHhCCc
Confidence 99999998765211 4899999999999998887766666776543221 1111 12367899999999999
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~ 398 (612)
+++||+.+++++... .+|..++.++ +..++.+|+||+|.+.|+|..++++..+|+..++ ..+...+..+++++|++
T Consensus 209 v~tVS~~~~~ei~~~-~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~ 286 (473)
T TIGR02095 209 VTTVSPTYAREILTP-EFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDL-AGKAENKEALQEELGLP 286 (473)
T ss_pred CeecCHhHHHHhcCC-cCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccch-hhhhhhHHHHHHHcCCC
Confidence 999999999999852 3444433322 2459999999999999999988889999998765 46666788999999999
Q ss_pred CCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 399 ~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
.+++.++|+|+||+.++||++.+++|++++.+.+++|+|+|+|++.+++.++++..+++.++.+.+.++.++++.++++|
T Consensus 287 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 366 (473)
T TIGR02095 287 VDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGA 366 (473)
T ss_pred ccCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhC
Confidence 76677999999999999999999999999987789999999998778889999998888889999999999999999999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC------cceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
|++++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.++++
T Consensus 367 Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 367 DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLF----------EEYDPGALLAALSRALR 436 (473)
T ss_pred CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 899987 99999999999999988
Q ss_pred hh--CHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 553 TY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 553 ~~--~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
.+ .++.+++|+++++.++|||+.++++|+++|+++
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 437 LYRQDPSLWEALQKNAMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHhcCHHHHHHHHHHHhccCCCcHHHHHHHHHHHHhC
Confidence 32 267889999999989999999999999999864
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-62 Score=561.58 Aligned_cols=435 Identities=32% Similarity=0.561 Sum_probs=365.1
Q ss_pred cccccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEE
Q 007212 77 LMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFH 156 (612)
Q Consensus 77 ~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (612)
+.+...++|||+||+.++.|+.++||+++++..|+++|+++||+|.|++|.|+...............+......+++++
T Consensus 580 g~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~ 659 (1036)
T PLN02316 580 GGIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWF 659 (1036)
T ss_pred CCCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEE
Confidence 33444567999999999999999999999999999999999999999999998654332111111122222234567888
Q ss_pred eeecCceEEEEeCcc-ccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEe
Q 007212 157 CHKRGVDRVFVDHPW-FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVA 235 (612)
Q Consensus 157 ~~~~gv~~~~v~~~~-~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~ 235 (612)
...+||++++++++. ++.+ ..+|+ |.|+..||.+||++++++++.+.+ +||| |||
T Consensus 660 ~~~~GV~vyfl~~~~~~F~r------~~~Yg------~~Dd~~RF~~F~~Aale~l~~~~~-----------~PDI-IHa 715 (1036)
T PLN02316 660 GKVEGLSVYFLEPQNGMFWA------GCVYG------CRNDGERFGFFCHAALEFLLQSGF-----------HPDI-IHC 715 (1036)
T ss_pred EEECCcEEEEEeccccccCC------CCCCC------chhHHHHHHHHHHHHHHHHHhcCC-----------CCCE-EEE
Confidence 888999999999873 5554 35675 789999999999999999988764 4895 999
Q ss_pred CCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHH
Q 007212 236 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI 315 (612)
Q Consensus 236 h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l 315 (612)
|||++++++.+++..+...++ .++|+|+|+|++.+++ +.++.++
T Consensus 716 HDW~talva~llk~~~~~~~~-~~~p~V~TiHnl~~~~-----------------------------------n~lk~~l 759 (1036)
T PLN02316 716 HDWSSAPVAWLFKDHYAHYGL-SKARVVFTIHNLEFGA-----------------------------------NHIGKAM 759 (1036)
T ss_pred CCChHHHHHHHHHHhhhhhcc-CCCCEEEEeCCcccch-----------------------------------hHHHHHH
Confidence 999999999999886644332 5789999999876532 3456788
Q ss_pred hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHh
Q 007212 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 395 (612)
..+|.|+|||+.+++++... .++.. +..++.+|+||||++.|+|.+++++..+|++.++..++...+..+++++
T Consensus 760 ~~AD~ViTVS~tya~EI~~~--~~l~~----~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~l 833 (1036)
T PLN02316 760 AYADKATTVSPTYSREVSGN--SAIAP----HLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRL 833 (1036)
T ss_pred HHCCEEEeCCHHHHHHHHhc--cCccc----ccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHh
Confidence 99999999999999999852 12211 1238999999999999999999999999999998888889999999999
Q ss_pred CCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-hhHHHHHHHHHHH----CCCceEEEeccChHH
Q 007212 396 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEIL----YPEKARGVAKFNIPL 470 (612)
Q Consensus 396 gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~----~~~~v~~~~~~~~~~ 470 (612)
|++. .+.++|+|+|||.++||++.|++|+..+.+.+++|+|+|+|+ ..+++.+++++.+ +++++.+.+.+++.+
T Consensus 834 GL~~-~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~l 912 (1036)
T PLN02316 834 GLKQ-ADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPL 912 (1036)
T ss_pred CCCc-ccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHH
Confidence 9984 356899999999999999999999999877789999999985 4567778888774 356788888998888
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC-------------cceEEecccccccccCCC
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-------------FTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g-------------~~G~~~~~~~~~~~~v~~ 537 (612)
.+.+|++||++|+||++||||+++||||+||+|||++++||++|+|.++ .+||+| ++
T Consensus 913 ah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf----------~~ 982 (1036)
T PLN02316 913 SHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF----------DG 982 (1036)
T ss_pred HHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe----------CC
Confidence 8899999999999999999999999999999999999999999999884 689987 99
Q ss_pred CCHHHHHHHHHHHHHhh-C-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Q 007212 538 VDVAAVSTTVRRALATY-G-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 538 ~d~~~la~~i~~ll~~~-~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
.|+++|+.+|.+++..+ . +..+.+++++++.++|||+.++++|+++|+++.
T Consensus 983 ~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 983 ADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 99999999999999874 2 355688889999999999999999999999875
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-62 Score=538.40 Aligned_cols=453 Identities=41% Similarity=0.683 Sum_probs=377.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCc-cEEEEEEeCCeeeEEEEEEe--eecC
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIELKVGDKIEKVRFFHC--HKRG 161 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~g 161 (612)
|||+||+.+++|+.++||+++++..|+++|+++||+|+|++|.|+...+.... ....++ ...+++.. ..+|
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g 74 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL------DLFTVLFGHLEGDG 74 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEe------eeEEEEEEeEEcCC
Confidence 89999999999999999999999999999999999999999999876543211 111111 12344433 5589
Q ss_pred ceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc
Q 007212 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~ 241 (612)
|++++++++.++.+ ..+|+ |.++..||.+|+++++++++.+++ +||+ ||+|||+++
T Consensus 75 v~v~~v~~~~~~~~------~~~y~------~~d~~~r~~~f~~~~~~~~~~~~~-----------~pDi-iH~h~w~~~ 130 (466)
T PRK00654 75 VPVYLIDAPHLFDR------PSGYG------YPDNGERFAFFSWAAAEFAEGLDP-----------RPDI-VHAHDWHTG 130 (466)
T ss_pred ceEEEEeCHHHcCC------CCCCC------CcChHHHHHHHHHHHHHHHHhcCC-----------CCce-EEECCcHHH
Confidence 99999999988876 45775 778999999999999999988754 4895 999999999
Q ss_pred chHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEE
Q 007212 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~v 321 (612)
+++.+++..+ ..+ +.++|+|+|+|++.++|.++...+..++++..... .+.+. ....+++++.++..||.|
T Consensus 131 ~~~~~l~~~~-~~~-~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~ad~v 201 (466)
T PRK00654 131 LIPALLKEKY-WRG-YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFH----LEGLE---FYGQISFLKAGLYYADRV 201 (466)
T ss_pred HHHHHHHHhh-hcc-CCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcC----chhhh---cCCcccHHHHHHHhcCcC
Confidence 9999998765 222 34789999999999999887766666677655422 11111 113568899999999999
Q ss_pred EecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCC
Q 007212 322 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~ 399 (612)
+|+|+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|..++.+..+|++.++ +.+...+..+++++|++.
T Consensus 202 itvS~~~~~ei~~-~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~ 279 (466)
T PRK00654 202 TTVSPTYAREITT-PEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDL-EGKAENKRALQERFGLPD 279 (466)
T ss_pred eeeCHHHHHHhcc-ccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhh-hchHHHHHHHHHHhCCCC
Confidence 9999999999875 22332222222 2348999999999999999988888889988775 477778889999999983
Q ss_pred CCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 400 ~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
++.++|+|+||+.++||++.+++|++++.+++++|+|+|+|+..+++.+++++.+++.++.+...++.++.+.++++||
T Consensus 280 -~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aD 358 (466)
T PRK00654 280 -DDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGAD 358 (466)
T ss_pred -CCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCC
Confidence 3568999999999999999999999999777999999999987788899999998887787778888888888999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC------cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
++|+||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++|+++|.++++.
T Consensus 359 v~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv----------~~~d~~~la~~i~~~l~~ 428 (466)
T PRK00654 359 MFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVF----------DDFNAEDLLRALRRALEL 428 (466)
T ss_pred EEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 899987 999999999999999874
Q ss_pred hC-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 554 YG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 554 ~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
+. ++.+.+++++++.++|||+.++++|+++|++++.
T Consensus 429 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 429 YRQPPLWRALQRQAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred hcCHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHhh
Confidence 32 4668889999988999999999999999998864
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-59 Score=515.00 Aligned_cols=462 Identities=44% Similarity=0.746 Sum_probs=387.1
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEE----EEEEeCCeeeEEEEEEeeecC
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVV----IELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g 161 (612)
||++|+.|++|+.++||+++++..|+++|+++||+|+|++|.|+...+.+..... ..+...+....++.++...+|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 7999999999999999999999999999999999999999999987765543322 234456667778888888999
Q ss_pred ceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc
Q 007212 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~ 241 (612)
|++++++++.++.+ ..+| +..+.+|.++..+|.+|+++++++++.+.. +||+ ||+|||+++
T Consensus 81 v~~~~l~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~-----------~pDv-iH~hd~~t~ 141 (476)
T cd03791 81 VPVYFLDNPDYFDR------PGLY-DDSGYDYEDNAERFALFSRAALELLRRLGW-----------KPDI-IHCHDWHTG 141 (476)
T ss_pred ceEEEEcChHHcCC------CCCC-CccCCCCccHHHHHHHHHHHHHHHHHhcCC-----------CCcE-EEECchHHH
Confidence 99999999988875 3344 445567899999999999999999988753 5895 999999999
Q ss_pred chHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEE
Q 007212 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~v 321 (612)
+++.+++..+.. ..+.++|+|+|+|++.++|.++...+..++.+.... .....+ .+...+++++.++..||.+
T Consensus 142 ~~~~~l~~~~~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~ad~v 214 (476)
T cd03791 142 LVPALLKEKYAD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEEL---FHIDGL---EFYGQVNFLKAGIVYADAV 214 (476)
T ss_pred HHHHHHHHhhcc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccch---hhhccc---ccCCcccHHHHHHHhcCcC
Confidence 999999877533 223589999999999999987766555444332100 011111 1234568899999999999
Q ss_pred EecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCC
Q 007212 322 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~ 399 (612)
+++|+.+++++.+ ..+|..++.++ +..++.+|+||+|.+.|.|..++.+...|+.. ....+...+..+++++|++.
T Consensus 215 ~~vS~~~~~~i~~-~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~-~~~~~~~~k~~l~~~~g~~~ 292 (476)
T cd03791 215 TTVSPTYAREILT-PEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSAD-DLEGKAENKAALQEELGLPV 292 (476)
T ss_pred eecCHhHHHHhCC-CCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCcc-ccccHHHHHHHHHHHcCCCc
Confidence 9999999999875 22333333333 23599999999999999999888888888854 44678888999999999986
Q ss_pred CCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 400 ~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
+++.++|+|+||+.++||++.+++|++++.+.+++|+|+|+|+..+++.++++..++++++.++..++.++.+.++++||
T Consensus 293 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 372 (476)
T cd03791 293 DPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGAD 372 (476)
T ss_pred CCCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCC
Confidence 66789999999999999999999999999877799999999987888899999888777899899999888889999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCc------ceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~------~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
++++||.+|+||++++|||+||+|||++++||+.|+|.++. +|+++ ++.|+++++++|.++++.
T Consensus 373 v~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~----------~~~~~~~l~~~i~~~l~~ 442 (476)
T cd03791 373 FFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF----------EGYNADALLAALRRALAL 442 (476)
T ss_pred EEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe----------CCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987 99987 999999999999999876
Q ss_pred hC-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 554 YG-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 554 ~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+. ++.+.+++++++.+.|||+.++++|+++|+
T Consensus 443 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 443 YRDPEAWRKLQRNAMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred HcCHHHHHHHHHHHhccCCChHHHHHHHHHHHh
Confidence 53 578899999999999999999999999996
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-59 Score=500.27 Aligned_cols=464 Identities=39% Similarity=0.612 Sum_probs=400.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCcc----EEEEEEeCCeeeEEEEEEeeec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD----VVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|||++++.|+.|+.++||++++++.|+++|++.||+|.|+.|.|+...+.|... ....+..++..+.....+..+.
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 999999999999999999999999999999999999999999999777766553 2233334444434444444433
Q ss_pred -CceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCc
Q 007212 161 -GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWH 239 (612)
Q Consensus 161 -gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~ 239 (612)
|++.+++|++.+++|- +..+.+|.|+..||.+|++++++.+...... ..|| |||+||||
T Consensus 81 ~~v~~~lid~~~~f~r~----------~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~---------~~pD-IvH~hDWq 140 (487)
T COG0297 81 GGVDLYLIDNPALFKRP----------DSTLYGYYDNAERFAFFSLAAAELAPLGLIS---------WLPD-IVHAHDWQ 140 (487)
T ss_pred CCCcEEEecChhhcCcc----------ccccCCCCcHHHHHHHHHHHHHHHhhhcCCC---------CCCC-EEEeecHH
Confidence 4999999999887751 2334459999999999999999999776520 1489 59999999
Q ss_pred ccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCC
Q 007212 240 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 319 (612)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad 319 (612)
++++|.+++..+.. +..+|.|||+||+.+||.|.......+++|..+... +....+ ..++++|.++..||
T Consensus 141 t~L~~~~lk~~~~~---~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~-~~l~~~------~~~~~lK~gi~~ad 210 (487)
T COG0297 141 TGLLPAYLKQRYRS---GYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYAS-FGLEFY------GQISFLKGGLYYAD 210 (487)
T ss_pred HHHHHHHHhhcccc---cccCCeEEEEeeceeecccchhhHHHhcCCHHHhhh-ceeeec------Ccchhhhhhheecc
Confidence 99999999986511 158999999999999999997777889999866542 111111 35789999999999
Q ss_pred EEEecCHHHHHHHHcCcCCCccchhhhh--ccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCC
Q 007212 320 MVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 320 ~vi~vS~~~~~~l~~~~~~G~~~~~~~~--~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl 397 (612)
.|.|||+.+++++. ..++|..++..++ ..++..|.||+|...|+|.+++++..+|+..+.. ++..++..+++++||
T Consensus 211 ~vttVSptYa~Ei~-t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~-~k~~nk~~L~~~~gL 288 (487)
T COG0297 211 AVTTVSPTYAGEIY-TPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP-AKAENKVALQERLGL 288 (487)
T ss_pred EEEEECHHHHHhhc-cccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchh-hhHHHHHHHHHHhCC
Confidence 99999999999999 4678877766663 3689999999999999999999999999988876 599999999999999
Q ss_pred CCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007212 398 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 398 ~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 477 (612)
+.+.+.|++.++||+..|||+|.+++++..+.+..++++++|+|+..++..+..++..+++++....+|+.+..+.+++.
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~ag 368 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAG 368 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhc
Confidence 98888899999999999999999999999999888999999999999999999999999999999999999999999999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec--------CcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--------g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
+|++++||++||||+++++||++|+++|+..+||++|+|.+ ..+||+| .+.++++|+.+|.+
T Consensus 369 aD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f----------~~~~~~~l~~al~r 438 (487)
T COG0297 369 ADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF----------LQTNPDHLANALRR 438 (487)
T ss_pred CCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEE----------ecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986 5799998 78899999999999
Q ss_pred HHHhhC-HHH-HHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 550 ALATYG-TQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 550 ll~~~~-~~~-~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++.-+. ++. ++.+.++++..+|||+..+++|.++|+.+...
T Consensus 439 A~~~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~~~ 481 (487)
T COG0297 439 ALVLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVELYKPLLSK 481 (487)
T ss_pred HHHHhhCCHHHHHHHHHhhcccccCchhHHHHHHHHHHHHhcc
Confidence 998764 344 88888999999999999999999999998754
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=362.60 Aligned_cols=462 Identities=18% Similarity=0.236 Sum_probs=360.0
Q ss_pred ccccHHHHhhchHHHHHhCCCeEEEEEecCCc-cc--------------cccC-------c-------cEEEEEEeCCee
Q 007212 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YK--------------DAWD-------T-------DVVIELKVGDKI 149 (612)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~-~~--------------~~~~-------~-------~~~~~~~~~~~~ 149 (612)
..||+|...+...++++..|...+.++-.|.+ |. +.|+ . ...+.+.+.++.
T Consensus 17 ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~~~~g~~~~~~v~i~g~~ 96 (601)
T TIGR02094 17 YSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVLDTDGKWLKISVRIRGRD 96 (601)
T ss_pred cCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEecCCCCeEEEEEecCCcE
Confidence 58999999999999999999999999877641 11 1121 1 123677778888
Q ss_pred eEEEEEEeeecCceEEEEeCccccccccCCCCC-cccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCC
Q 007212 150 EKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGK 228 (612)
Q Consensus 150 ~~~~~~~~~~~gv~~~~v~~~~~~~~~~g~~~~-~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 228 (612)
..++.+....+++++++++++..-...|.+... .+|++ |..++..++.+|+.++++.++.+++ +
T Consensus 97 ~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~----D~~~R~~Qe~fl~~a~l~~l~~l~~-----------~ 161 (601)
T TIGR02094 97 VYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGG----DKEMRIAQEIVLGIGGVRALRALGI-----------D 161 (601)
T ss_pred EEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCC----CHHHHHHHHHHHHHHHHHHHHHcCC-----------C
Confidence 889999988899999999988622222333332 46863 3455666669999999999998875 4
Q ss_pred CcEEEEeCCCcccchHHHHHhhhcCCCC-----c--CCceEEEEEecCCcccc--cCccccc--------ccCCCccccc
Q 007212 229 KNVVFVANDWHTSLIPCYLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAFEDFG--------LLNLPAQFKS 291 (612)
Q Consensus 229 pDvVi~~h~~~~~~~~~~l~~~~~~~~~-----~--~~~pvv~~iH~~~~~~~--~~~~~~~--------~~~l~~~~~~ 291 (612)
||+ ||+||||+++++.++.+..-..++ + .+.+++||+||+.++|. |+...+. .++++.....
T Consensus 162 pdv-iH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~~~~~~ 240 (601)
T TIGR02094 162 PDV-YHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLPREQLL 240 (601)
T ss_pred ceE-EEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCCHHHHH
Confidence 895 999999999999987543111110 0 14779999999999997 8876663 3566655433
Q ss_pred ccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCccc
Q 007212 292 SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDK 369 (612)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~ 369 (612)
..... .+-....+++++.++..||.|.+||+.+.+..... .+ ++...+ +..++..|.||||...|.|.+++
T Consensus 241 ~~~~~----~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l--~~-~l~~~~~~~~~~i~gItNGId~~~W~~~~~~ 313 (601)
T TIGR02094 241 ALGRE----NPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKM--WQ-FLYPGYEEEEVPIGYVTNGVHNPTWVAPELR 313 (601)
T ss_pred hhhhh----ccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHH--HH-hhhhhcccccCCccceeCCccccccCCHHHH
Confidence 22111 11011357999999999999999999998833321 00 011111 12368999999999999999999
Q ss_pred ccccccCcch---------------------hhhccHHHHHHHHH---------------------HhCCCCCCCCcEEE
Q 007212 370 YIGVKYDAST---------------------VMDAKPLLKEALQA---------------------EVGLPVDRNIPVIG 407 (612)
Q Consensus 370 ~~~~~~~~~~---------------------~~~~~~~~~~~l~~---------------------~~gl~~~~~~~~i~ 407 (612)
.+..+|+..+ +.++|..+|.+|++ ++|++.+++.++++
T Consensus 314 ~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig 393 (601)
T TIGR02094 314 DLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIG 393 (601)
T ss_pred HHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEE
Confidence 9999999877 34789999999988 58888888999999
Q ss_pred EEccCccccCHHHHHHHHHhccc------CCeEEEEEecCChh------HHHHHHHHHHH--CCCceEEEeccChHHHHH
Q 007212 408 FIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEIL--YPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 408 ~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~~~------~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~ 473 (612)
+++|+.++||.+++++++..+.+ .++||+++|++.+. +++.+.+++.+ +++++.++..|+..+++.
T Consensus 394 ~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~ 473 (601)
T TIGR02094 394 FARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARY 473 (601)
T ss_pred EEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHH
Confidence 99999999999999999988853 57999999999854 99999999988 888999999999999999
Q ss_pred HHHhccEEEE-cCC-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccc--cccccCCCCCHHHHHHHHHH
Q 007212 474 IIAGADFILI-PSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFS--VDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 474 i~~~aDv~v~-pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~--~~~~~v~~~d~~~la~~i~~ 549 (612)
++++||++++ ||+ +|+||++.+-||..|.+.+++-.|...|.. ++.|||.||... .+.+..|..|.++|.++|++
T Consensus 474 i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ 552 (601)
T TIGR02094 474 LVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLEN 552 (601)
T ss_pred HhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccccccCCCHHHHHHHHHH
Confidence 9999999999 999 999999999999999999999988888887 567999997321 12233457899999999988
Q ss_pred HH-Hhh-C------HHHHHHHHHHHHHh---hcCcHHHHHHHHHHH
Q 007212 550 AL-ATY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEETL 584 (612)
Q Consensus 550 ll-~~~-~------~~~~~~~~~~~~~~---~fsw~~~a~~~~~~y 584 (612)
.+ ..+ . +..+.++.+++|.. +|||++++++|.++|
T Consensus 553 ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 553 EVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred HHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 77 332 1 34689999999987 899999999999987
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=350.41 Aligned_cols=396 Identities=17% Similarity=0.189 Sum_probs=277.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++|+.+|+|. .||.+.++.+|+++|.++||+|+|+|+.. .++. |..... ........+...|+++
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~~-~~~~-~~~~~~--------~~~~~~~~~~~~~i~v 68 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAPP-YYPQ-WRVGEG--------YSAWRYRRESEGGVTV 68 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecCC-CCCC-CCCCcc--------cccccceeeecCCeEE
Confidence 8999999999897 89999999999999999999999999762 1111 110000 0001122234568888
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHH-hhhhccCCCCccCCCCCCCcEEEEeCCCcc--c
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGKKNVVFVANDWHT--S 241 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~--~ 241 (612)
+++....... .. .......+..|....+.. .+... .+||+ ||+|.+.. +
T Consensus 69 ~r~~~~~~~~---------~~-------~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~Di-v~~~~p~~~~~ 120 (412)
T PRK10307 69 WRCPLYVPKQ---------PS-------GLKRLLHLGSFALSSFFPLLAQRR-----------WRPDR-VIGVVPTLFCA 120 (412)
T ss_pred EEccccCCCC---------cc-------HHHHHHHHHHHHHHHHHHHhhccC-----------CCCCE-EEEeCCcHHHH
Confidence 8774311100 00 000111111122222222 22211 25895 88886432 2
Q ss_pred chHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCc-hhHHHHHHHhhCCE
Q 007212 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR-KINWMKAGILESDM 320 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~l~~ad~ 320 (612)
.....+++. .++|+++++|+..++..+. .+... . +...+ ...+++..++.+|.
T Consensus 121 ~~~~~~~~~-------~~~~~v~~~~d~~~~~~~~------~~~~~---~----------~~~~~~~~~~~~~~~~~ad~ 174 (412)
T PRK10307 121 PGARLLARL-------SGARTWLHIQDYEVDAAFG------LGLLK---G----------GKVARLATAFERSLLRRFDN 174 (412)
T ss_pred HHHHHHHHh-------hCCCEEEEeccCCHHHHHH------hCCcc---C----------cHHHHHHHHHHHHHHhhCCE
Confidence 333344443 4789999999754321110 01000 0 00001 11345677889999
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 400 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 400 (612)
++++|+..++.+.+ +|.+.+ ++.+||||+|.+.|.|.... ....++++++++.
T Consensus 175 ii~~S~~~~~~~~~---~~~~~~------~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~- 227 (412)
T PRK10307 175 VSTISRSMMNKARE---KGVAAE------KVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPD- 227 (412)
T ss_pred EEecCHHHHHHHHH---cCCCcc------cEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCC-
Confidence 99999999999886 455444 89999999999888764321 1335677888864
Q ss_pred CCCcEEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCC-CceEEEeccChHHHHHHHHhc
Q 007212 401 RNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 401 ~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~i~~~a 478 (612)
+.++|+|+||+.+.||++.|++|++.+.+ ++++|+|+|+|+ ..+.+++++.+++ .++.+.+..+.+.+..+++.|
T Consensus 228 -~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~a 304 (412)
T PRK10307 228 -GKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGG--GKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMA 304 (412)
T ss_pred -CCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCCh--hHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhc
Confidence 34899999999999999999999998865 689999999998 5566777666543 358888877888888999999
Q ss_pred cEEEEcCCCCC----CcHHHHHHHHcCCceEEcCCCC--cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 479 DFILIPSRFEP----CGLIQLHAMRYGTVPIVASTGG--LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 479 Dv~v~pS~~E~----~gl~~lEAma~G~PvI~s~~gg--~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
|++++||..|+ +|.+++|||+||+|||+|+.+| +.|++. .+|+++ +++|+++++++|.++++
T Consensus 305 Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~----------~~~d~~~la~~i~~l~~ 372 (412)
T PRK10307 305 DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCV----------EPESVEALVAAIAALAR 372 (412)
T ss_pred CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEe----------CCCCHHHHHHHHHHHHh
Confidence 99999999988 5778999999999999999876 457776 589976 99999999999999998
Q ss_pred hhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 553 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
+ ++.+.+|++++ +.++|||+.++++|+++|++++.+
T Consensus 373 ~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 373 Q--ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred C--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 8 66777777776 467899999999999999998754
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=370.17 Aligned_cols=451 Identities=17% Similarity=0.147 Sum_probs=291.1
Q ss_pred CCCceEEEEEecccC---------ccccccHHHHhhchHHHHHhCC--CeEEEEEecCCccccccCccEEEEEEeCCe-e
Q 007212 82 GVGLNILFVGTEVAP---------WSKTGGLGDVLGGLPPALAANG--HRVMTIAPRYDQYKDAWDTDVVIELKVGDK-I 149 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P---------~~~~GG~~~~~~~L~~~L~~~G--h~V~vit~~~~~~~~~~~~~~~~~~~~~~~-~ 149 (612)
.++|.|++|+..-.| .+.+||...|+.+|+++|+++| |+|+|+|...+...-.|+.....+.. .++ .
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~-~~~~~ 245 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEML-TPRSS 245 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccc-ccccc
Confidence 458999999864332 2458999999999999999998 89999997744211112211111110 000 0
Q ss_pred eEEEEEEeeecCceEEEEeCcc---ccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccC-CC
Q 007212 150 EKVRFFHCHKRGVDRVFVDHPW---FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFS-GP 225 (612)
Q Consensus 150 ~~~~~~~~~~~gv~~~~v~~~~---~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~-~~ 225 (612)
+.........+|+.+++|+... ++.| ..-+.....|...++..++.+...-..-+. |.
T Consensus 246 ~~~~~~~~~~~g~rIvRip~GP~~~~l~K------------------e~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~ 307 (1050)
T TIGR02468 246 ENDGDEMGESSGAYIIRIPFGPRDKYIPK------------------EELWPYIPEFVDGALSHIVNMSKVLGEQIGSGH 307 (1050)
T ss_pred ccccccccCCCCeEEEEeccCCCCCCcCH------------------HHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccc
Confidence 0011111234588888875332 2222 001122334555555554331000000000 00
Q ss_pred CCCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCC
Q 007212 226 YGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 305 (612)
Q Consensus 226 ~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (612)
-..||| ||+|+|..+.++..++... ++|+|+|.|.+..... ..+..-+... .. .....|. ..
T Consensus 308 ~~~pDv-IHaHyw~sG~aa~~L~~~l-------gVP~V~T~HSLgr~K~---~~ll~~g~~~--~~--~~~~~y~---~~ 369 (1050)
T TIGR02468 308 PVWPYV-IHGHYADAGDSAALLSGAL-------NVPMVLTGHSLGRDKL---EQLLKQGRMS--KE--EINSTYK---IM 369 (1050)
T ss_pred CCCCCE-EEECcchHHHHHHHHHHhh-------CCCEEEECccchhhhh---hhhccccccc--cc--ccccccc---hH
Confidence 012895 9999999999999999874 9999999997632110 0000000000 00 0000000 11
Q ss_pred chhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccch--hh----h---------hccCeEEeeCCccCCCcCCCcccc
Q 007212 306 RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELD--NI----I---------RKTGIKGIVNGMDVQEWNPLTDKY 370 (612)
Q Consensus 306 ~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~--~~----~---------~~~~i~vI~ngvd~~~~~p~~~~~ 370 (612)
+.+..++..+..||.||++|+..++++.+.+. +.++. .. + ...++.|||||||+..|.|.....
T Consensus 370 ~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~-~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~ 448 (1050)
T TIGR02468 370 RRIEAEELSLDASEIVITSTRQEIEEQWGLYD-GFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDM 448 (1050)
T ss_pred HHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhc-cCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccc
Confidence 34566788999999999999999998765321 11110 00 0 012899999999999998853210
Q ss_pred cccccCcchh------hhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc----CCeEEEEEec
Q 007212 371 IGVKYDASTV------MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQIIVLGT 440 (612)
Q Consensus 371 ~~~~~~~~~~------~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~----~~~~lvivG~ 440 (612)
+.... ....+.....+++.+ .+ +++++|+|+||+.++||++.||+|+..+.+ +++. +|+|.
T Consensus 449 -----~~~~~~~~~~~~~~~~~~~~~l~r~~-~~--pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~ 519 (1050)
T TIGR02468 449 -----DGETEGNEEHPAKPDPPIWSEIMRFF-TN--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGN 519 (1050)
T ss_pred -----cchhcccccccccccchhhHHHHhhc-cc--CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEec
Confidence 00000 000000112233333 22 355899999999999999999999999853 3555 46687
Q ss_pred CCh---------hHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc----cEEEEcCCCCCCcHHHHHHHHcCCceE
Q 007212 441 GKK---------PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPI 505 (612)
Q Consensus 441 g~~---------~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~a----Dv~v~pS~~E~~gl~~lEAma~G~PvI 505 (612)
++. .+...+.++..+++ ++|.+.+..+.+.++.+|+.| |+||+||.+|+||++++||||||+|||
T Consensus 520 gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVV 599 (1050)
T TIGR02468 520 RDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMV 599 (1050)
T ss_pred CchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEE
Confidence 642 12345666666654 567777766778888899887 699999999999999999999999999
Q ss_pred EcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHH
Q 007212 506 VASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEET 583 (612)
Q Consensus 506 ~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~ 583 (612)
+|+.||+.|+|.++.+|+++ ++.|+++|+++|.+++++ ++.+++|++++. .++|||+.++++|++.
T Consensus 600 ASdvGG~~EII~~g~nGlLV----------dP~D~eaLA~AL~~LL~D--pelr~~m~~~gr~~v~~FSWe~ia~~yl~~ 667 (1050)
T TIGR02468 600 ATKNGGPVDIHRVLDNGLLV----------DPHDQQAIADALLKLVAD--KQLWAECRQNGLKNIHLFSWPEHCKTYLSR 667 (1050)
T ss_pred EeCCCCcHHHhccCCcEEEE----------CCCCHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 99999999999999999976 999999999999999998 777888888773 4679999999999999
Q ss_pred HHHHHHcC
Q 007212 584 LLNLEVAG 591 (612)
Q Consensus 584 y~~l~~~~ 591 (612)
|..+....
T Consensus 668 i~~~~~~~ 675 (1050)
T TIGR02468 668 IASCRPRH 675 (1050)
T ss_pred HHHHhccC
Confidence 99887543
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-39 Score=346.13 Aligned_cols=387 Identities=20% Similarity=0.267 Sum_probs=275.9
Q ss_pred EEEEEecccCcc-----ccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecC
Q 007212 87 ILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 87 Il~v~~~~~P~~-----~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
|++++....|+. ..||.+.++.+|+++|+++||+|+|+|+........ .....+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~--------------------~~~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQPP--------------------VVEVAPG 60 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC--------------------ccccCCC
Confidence 567777777752 259999999999999999999999999763211100 0112356
Q ss_pred ceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHH-HHhhhhccCCCCccCCCCCCCcEEEEeCCCcc
Q 007212 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAAL-EAPRILNLNSNKYFSGPYGKKNVVFVANDWHT 240 (612)
Q Consensus 162 v~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~ 240 (612)
++++.+....+... ........+..+....+ ..++... ++||+ +|+|+|..
T Consensus 61 ~~v~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~Di-ih~h~~~~ 112 (405)
T TIGR03449 61 VRVRNVVAGPYEGL----------------DKEDLPTQLCAFTGGVLRAEARHEP-----------GYYDL-IHSHYWLS 112 (405)
T ss_pred cEEEEecCCCcccC----------------CHHHHHHHHHHHHHHHHHHHhhccC-----------CCCCe-EEechHHH
Confidence 77766633221110 00000111111222222 2222211 24895 89999888
Q ss_pred cchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCE
Q 007212 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~ 320 (612)
+.++.++++. .++|+|+++|+...... ..+.....+ .......+.+..++.+|.
T Consensus 113 ~~~~~~~~~~-------~~~p~v~t~h~~~~~~~---~~~~~~~~~----------------~~~~~~~~e~~~~~~~d~ 166 (405)
T TIGR03449 113 GQVGWLLRDR-------WGVPLVHTAHTLAAVKN---AALADGDTP----------------EPEARRIGEQQLVDNADR 166 (405)
T ss_pred HHHHHHHHHh-------cCCCEEEeccchHHHHH---HhccCCCCC----------------chHHHHHHHHHHHHhcCe
Confidence 7777776654 48899999996532100 000000000 000111223567889999
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 400 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 400 (612)
++++|+...+.+... +|.+.+ ++.+|+||+|.+.|.|.. +...+++++++.
T Consensus 167 vi~~s~~~~~~~~~~--~~~~~~------ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~- 217 (405)
T TIGR03449 167 LIANTDEEARDLVRH--YDADPD------RIDVVAPGADLERFRPGD--------------------RATERARLGLPL- 217 (405)
T ss_pred EEECCHHHHHHHHHH--cCCChh------hEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCC-
Confidence 999999988887642 454433 899999999998886642 345677788764
Q ss_pred CCCcEEEEEccCccccCHHHHHHHHHhccc--CC--eEEEEEecCC--h-hHHHHHHHHHHHCC--CceEEEeccChHHH
Q 007212 401 RNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN--VQIIVLGTGK--K-PMEKQLEQLEILYP--EKARGVAKFNIPLA 471 (612)
Q Consensus 401 ~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~--~~lvivG~g~--~-~~~~~l~~l~~~~~--~~v~~~~~~~~~~~ 471 (612)
+.++|+|+||+.+.||++.+++|++.+.+ ++ ++|+|+|.+. . ...+.++++....+ +++.+.+..+.+++
T Consensus 218 -~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 296 (405)
T TIGR03449 218 -DTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEEL 296 (405)
T ss_pred -CCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHH
Confidence 44899999999999999999999999854 44 9999999632 1 34556677666554 46888887788888
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
..+++.||++++||..|+||++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.+++
T Consensus 297 ~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~la~~i~~~l 366 (405)
T TIGR03449 297 VHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLV----------DGHDPADWADALARLL 366 (405)
T ss_pred HHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEEC----------CCCCHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999976 8999999999999999
Q ss_pred HhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
++ ++.+.+++.++. .++|||+.++++|+++|.+++.
T Consensus 367 ~~--~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 367 DD--PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred hC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 87 666777777663 5789999999999999998763
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=346.64 Aligned_cols=393 Identities=19% Similarity=0.182 Sum_probs=260.1
Q ss_pred cCccccccHHHHhhchHHHHHhCCC--eEEEEEecCCccc--cccCccEEEEEEeCCeeeEEEEEEeeecCceEEEEeCc
Q 007212 95 APWSKTGGLGDVLGGLPPALAANGH--RVMTIAPRYDQYK--DAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHP 170 (612)
Q Consensus 95 ~P~~~~GG~~~~~~~L~~~L~~~Gh--~V~vit~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~ 170 (612)
+|. .||++.++.+|+++|+++|| +|+|+|..++.-. ..+. .......+|++++++...
T Consensus 22 ~p~--~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~----------------~~~~~~~~gv~v~r~~~~ 83 (439)
T TIGR02472 22 DAD--TGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYA----------------QPIERIAPGARIVRLPFG 83 (439)
T ss_pred CCC--CCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccC----------------CCeeEeCCCcEEEEecCC
Confidence 354 89999999999999999998 9999997643210 1000 011233468888887432
Q ss_pred cccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHHHHHhh
Q 007212 171 WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTM 250 (612)
Q Consensus 171 ~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~~ 250 (612)
.. .+.. ..+-...+..+.....+.++... .+||| ||+|.|..++++..++..
T Consensus 84 ~~-----------~~~~-----~~~~~~~~~~~~~~l~~~~~~~~-----------~~~Dv-IH~h~~~~~~~~~~~~~~ 135 (439)
T TIGR02472 84 PR-----------RYLR-----KELLWPYLDELADNLLQHLRQQG-----------HLPDL-IHAHYADAGYVGARLSRL 135 (439)
T ss_pred CC-----------CCcC-----hhhhhhhHHHHHHHHHHHHHHcC-----------CCCCE-EEEcchhHHHHHHHHHHH
Confidence 10 0100 00001112234445555554432 14895 999999887777766654
Q ss_pred hcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHH
Q 007212 251 YKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQ 330 (612)
Q Consensus 251 ~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~ 330 (612)
.++|+|+|.|+...... ..+...++...... ..+. ....+.+++..++.+|.|+++|+...+
T Consensus 136 -------~~~p~V~t~H~~~~~~~---~~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~ad~ii~~s~~~~~ 197 (439)
T TIGR02472 136 -------LGVPLIFTGHSLGREKR---RRLLAAGLKPQQIE-----KQYN---ISRRIEAEEETLAHASLVITSTHQEIE 197 (439)
T ss_pred -------hCCCEEEecccccchhh---hhcccCCCChhhhh-----hhcc---hHHHHHHHHHHHHhCCEEEECCHHHHH
Confidence 48899999996432110 00000011000000 0000 011234567789999999999987554
Q ss_pred HHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEc
Q 007212 331 ELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIG 410 (612)
Q Consensus 331 ~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iG 410 (612)
..... ..|++.+ ++.+||||+|.+.|.|.... ......+..+ ++++.+. +.++|+|+|
T Consensus 198 ~~~~~-~~~~~~~------ki~vIpnGvd~~~f~~~~~~------------~~~~~~~~~~-~~~~~~~--~~~~i~~vG 255 (439)
T TIGR02472 198 EQYAL-YDSYQPE------RMQVIPPGVDLSRFYPPQSS------------EETSEIDNLL-APFLKDP--EKPPILAIS 255 (439)
T ss_pred HHHHh-ccCCCcc------ceEEECCCcChhhcCCCCcc------------ccchhHHHHH-Hhhcccc--CCcEEEEEc
Confidence 43211 1244433 89999999999998775321 0001111222 3344433 347999999
Q ss_pred cCccccCHHHHHHHHHhccc--CCeEEE-EEecCCh--hH-------HHHHHHHHHH--CCCceEEEeccChHHHHHHHH
Q 007212 411 RLEEQKGSDILAAAIPHFIK--ENVQII-VLGTGKK--PM-------EKQLEQLEIL--YPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 411 rl~~~Kg~d~li~A~~~l~~--~~~~lv-ivG~g~~--~~-------~~~l~~l~~~--~~~~v~~~~~~~~~~~~~i~~ 476 (612)
|+.+.||++.|++|++.+.+ .+.+++ |+|+|+. .+ .+.+.++..+ +.+++.+.+.++.++++.+|+
T Consensus 256 rl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~ 335 (439)
T TIGR02472 256 RPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYR 335 (439)
T ss_pred CCcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHH
Confidence 99999999999999986522 234443 5687652 11 1223444444 335677777777788888998
Q ss_pred hc----cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 477 GA----DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 477 ~a----Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
.| |++|+||.+|+||++++|||+||+|||+|+.||+.|++.++.+|+++ ++.|+++|+++|.++++
T Consensus 336 ~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv----------~~~d~~~la~~i~~ll~ 405 (439)
T TIGR02472 336 LAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLV----------DVLDLEAIASALEDALS 405 (439)
T ss_pred HHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHh
Confidence 77 99999999999999999999999999999999999999999999976 99999999999999999
Q ss_pred hhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~ 585 (612)
+ +..+.+|++++ +.++|||+.++++|+++++
T Consensus 406 ~--~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 406 D--SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred C--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 8 66667777766 5689999999999999863
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=342.88 Aligned_cols=364 Identities=19% Similarity=0.241 Sum_probs=258.5
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+.+|.|. .||.+.++.+|+++|+++||+|+|+++.++..... .....|++++
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---------------------~~~~~~i~v~ 57 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI---------------------RYLTNGLKVY 57 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc---------------------ccccCceeEE
Confidence 799999999997 89999999999999999999999999874321110 0112355555
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+........ ... . ++..+...+...++. .+||+ +|+|++.......
T Consensus 58 ~~p~~~~~~~-------~~~--------~----~~~~~~~~l~~~~~~-------------~~~Di-Ih~~~~~~~~~~~ 104 (398)
T cd03796 58 YLPFVVFYNQ-------STL--------P----TFFGTFPLLRNILIR-------------ERITI-VHGHQAFSALAHE 104 (398)
T ss_pred EecceeccCC-------ccc--------c----chhhhHHHHHHHHHh-------------cCCCE-EEECCCCchHHHH
Confidence 5532211100 000 0 001111222222222 25895 9999866554322
Q ss_pred --HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEe
Q 007212 246 --YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 246 --~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~ 323 (612)
.+.+. .++|+|++.|+... ... .... ....+++..++.+|.+++
T Consensus 105 ~~~~~~~-------~~~~~v~t~h~~~~-----~~~-----~~~~-----------------~~~~~~~~~~~~~d~ii~ 150 (398)
T cd03796 105 ALLHART-------MGLKTVFTDHSLFG-----FAD-----ASSI-----------------HTNKLLRFSLADVDHVIC 150 (398)
T ss_pred HHHHhhh-------cCCcEEEEeccccc-----ccc-----hhhH-----------------HhhHHHHHhhccCCEEEE
Confidence 22222 47899999996421 000 0000 011234566789999999
Q ss_pred cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007212 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 403 (612)
+|+...+.+... .+.+.+ ++.+||||+|.+.|.|...+ .+++.
T Consensus 151 ~s~~~~~~~~~~--~~~~~~------k~~vi~ngvd~~~f~~~~~~-----------------------------~~~~~ 193 (398)
T cd03796 151 VSHTSKENTVLR--ASLDPE------RVSVIPNAVDSSDFTPDPSK-----------------------------RDNDK 193 (398)
T ss_pred ecHhHhhHHHHH--hCCChh------hEEEEcCccCHHHcCCCccc-----------------------------CCCCc
Confidence 999988765421 333333 89999999999888765320 11355
Q ss_pred cEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhcc
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
++|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+ ..+.++++..++ .+++.+.+..+.+++..+++.||
T Consensus 194 ~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad 271 (398)
T cd03796 194 ITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP--KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGH 271 (398)
T ss_pred eEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc--hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 899999999999999999999998864 799999999987 445566666654 35688888888888889999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHH-H
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-A 558 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~-~ 558 (612)
++++||..|+||++++|||+||+|||+++.||..|++.++..++ .+.|+++++++|.+++++.... .
T Consensus 272 ~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~~~------------~~~~~~~l~~~l~~~l~~~~~~~~ 339 (398)
T cd03796 272 IFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILL------------AEPDVESIVRKLEEAISILRTGKH 339 (398)
T ss_pred EEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCceee------------cCCCHHHHHHHHHHHHhChhhhhh
Confidence 99999999999999999999999999999999999998864333 4458999999999999873222 2
Q ss_pred HHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 559 LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 559 ~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
..+.+++.+.++|||+.++++|.++|++++..
T Consensus 340 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 340 DPWSFHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 23334444789999999999999999998854
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=338.47 Aligned_cols=373 Identities=21% Similarity=0.284 Sum_probs=267.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++|+..|+|. ..||.+.++.+|+++|.++ |+|.|++...+.. ..+|+++
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~--------------------------~~~~~~~ 52 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQRF--------------------------DSEGLTV 52 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCchh--------------------------cCCCeEE
Confidence 8999999999885 4599999999999999998 7888887652210 1123444
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
+....+..... +... +..+.. .+...... .+||+ +|+|.|..++.+
T Consensus 53 ~~~~~~~~~~~-----------------~~~~---~~~~~~---~~~~~~~~----------~~~di-vh~~~~~~~~~~ 98 (388)
T TIGR02149 53 KGYRPWSELKE-----------------ANKA---LGTFSV---DLAMANDP----------VDADV-VHSHTWYTFLAG 98 (388)
T ss_pred EEecChhhccc-----------------hhhh---hhhhhH---HHHHhhCC----------CCCCe-EeecchhhhhHH
Confidence 33321110000 0000 001111 11111111 24795 999998887666
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
...+.. .++|+++++|+..+...+.... .+ .++ .....+.+..++.+|.++++
T Consensus 99 ~~~~~~-------~~~p~v~~~h~~~~~~~~~~~~---~~------------~~~-----~~~~~~~~~~~~~ad~vi~~ 151 (388)
T TIGR02149 99 HLAKKL-------YDKPLVVTAHSLEPLRPWKEEQ---LG------------GGY-----KLSSWAEKTAIEAADRVIAV 151 (388)
T ss_pred HHHHHh-------cCCCEEEEeecccccccccccc---cc------------cch-----hHHHHHHHHHHhhCCEEEEc
Confidence 555443 4899999999764322111000 00 000 00112346678899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+.+++.+.+.. .|...+ ++.+||||+|...|.|.. +..++++++++. +.+
T Consensus 152 S~~~~~~~~~~~-~~~~~~------~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~ 202 (388)
T TIGR02149 152 SGGMREDILKYY-PDLDPE------KVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDR--SRP 202 (388)
T ss_pred cHHHHHHHHHHc-CCCCcc------eEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCC--Cce
Confidence 999999887521 133323 899999999998887642 455778888864 448
Q ss_pred EEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC--hhHHHHHHHHHHHCCC---ceEEEe-ccChHHHHHHHHhc
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPE---KARGVA-KFNIPLAHMIIAGA 478 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~---~v~~~~-~~~~~~~~~i~~~a 478 (612)
+|+|+||+.+.||++.+++|++++. ++++++++|+|. ..+.+.+++....++. ++.+++ ..+.+++..+++.|
T Consensus 203 ~i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 203 YILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred EEEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhC
Confidence 9999999999999999999999984 578899988764 3455666666555432 355554 45778888999999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCH------HHHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV------AAVSTTVRRALA 552 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~------~~la~~i~~ll~ 552 (612)
|++|+||.+|++|++++|||+||+|||+|+.||..|++.++.+|+++ +++|+ ++++++|.++++
T Consensus 282 Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~~~~~~~l~~~i~~l~~ 351 (388)
T TIGR02149 282 EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLV----------PPDNSDADGFQAELAKAINILLA 351 (388)
T ss_pred CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEc----------CCCCCcccchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999976 88887 999999999999
Q ss_pred hhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+ ++.+++|+.++ ..++|||+.++++|.++|++++
T Consensus 352 ~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 352 D--PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred C--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 8 66777777776 4688999999999999999763
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=347.79 Aligned_cols=376 Identities=18% Similarity=0.229 Sum_probs=266.4
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecC
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
+++|||+++.... |+...||.+.++.+|+++|.++||+|+|+++.... .+. ..|
T Consensus 56 ~~~mrI~~~~~~~-~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~-~~~------------------------~~g 109 (465)
T PLN02871 56 SRPRRIALFVEPS-PFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV-PQE------------------------FHG 109 (465)
T ss_pred CCCceEEEEECCc-CCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC-Ccc------------------------ccC
Confidence 6789999998643 33458999999999999999999999999986321 110 012
Q ss_pred ceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc
Q 007212 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~ 241 (612)
++++.+.... . ..|.. ....+. +...+.+.++.. +||+ ||+|.....
T Consensus 110 ~~v~~~~~~~--~--------~~~~~--------~~~~~~-~~~~l~~~i~~~-------------kpDi-Ih~~~~~~~ 156 (465)
T PLN02871 110 AKVIGSWSFP--C--------PFYQK--------VPLSLA-LSPRIISEVARF-------------KPDL-IHASSPGIM 156 (465)
T ss_pred ceeeccCCcC--C--------ccCCC--------ceeecc-CCHHHHHHHHhC-------------CCCE-EEECCCchh
Confidence 2222110000 0 00000 000000 011223334433 4895 899874332
Q ss_pred ch-HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCE
Q 007212 242 LI-PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 242 ~~-~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~ 320 (612)
.. ...+.+. .++|+|++.|+....- .+ ...... . ......+++...+.+|.
T Consensus 157 ~~~~~~~ak~-------~~ip~V~~~h~~~~~~-~~-----~~~~~~-----------~----~~~~~~~~r~~~~~ad~ 208 (465)
T PLN02871 157 VFGALFYAKL-------LCVPLVMSYHTHVPVY-IP-----RYTFSW-----------L----VKPMWDIIRFLHRAADL 208 (465)
T ss_pred HHHHHHHHHH-------hCCCEEEEEecCchhh-hh-----cccchh-----------h----HHHHHHHHHHHHhhCCE
Confidence 22 2223332 4889999999643210 00 000000 0 00112335667789999
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 400 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 400 (612)
++++|+...+.+.+ .|... ..++.+||||+|.+.|.|... ...+++++....
T Consensus 209 ii~~S~~~~~~l~~---~~~~~-----~~kv~vi~nGvd~~~f~p~~~-------------------~~~~~~~~~~~~- 260 (465)
T PLN02871 209 TLVTSPALGKELEA---AGVTA-----ANRIRVWNKGVDSESFHPRFR-------------------SEEMRARLSGGE- 260 (465)
T ss_pred EEECCHHHHHHHHH---cCCCC-----cCeEEEeCCccCccccCCccc-------------------cHHHHHHhcCCC-
Confidence 99999999999986 33211 128999999999998877532 223344443221
Q ss_pred CCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 401 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 401 ~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
++.++|+|+||+.++||++.++++++++ ++++|+|+|+|+ +.+.++++.... ++.+.+..+.+++..+|+.||+
T Consensus 261 ~~~~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~--~~~~l~~~~~~~--~V~f~G~v~~~ev~~~~~~aDv 334 (465)
T PLN02871 261 PEKPLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP--YREELEKMFAGT--PTVFTGMLQGDELSQAYASGDV 334 (465)
T ss_pred CCCeEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh--HHHHHHHHhccC--CeEEeccCCHHHHHHHHHHCCE
Confidence 2458999999999999999999999987 689999999987 667777776653 4888888788888899999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec---CcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 557 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 557 (612)
+|+||..|+||++++|||+||+|||+++.||+.|++.+ +.+|+++ +++|+++++++|.+++++ ++
T Consensus 335 ~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~~ 402 (465)
T PLN02871 335 FVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLY----------TPGDVDDCVEKLETLLAD--PE 402 (465)
T ss_pred EEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEe----------CCCCHHHHHHHHHHHHhC--HH
Confidence 99999999999999999999999999999999999998 9999986 999999999999999998 67
Q ss_pred HHHHHHHHH--HHhhcCcHHHHHHHHH-HHHHHHHc
Q 007212 558 ALAEMMKNG--MAQDLSWKGPAKKWEE-TLLNLEVA 590 (612)
Q Consensus 558 ~~~~~~~~~--~~~~fsw~~~a~~~~~-~y~~l~~~ 590 (612)
.+.+|++++ ..++|||+.+++++++ +|+++...
T Consensus 403 ~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 403 LRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 777787777 3578999999999998 79988764
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=349.23 Aligned_cols=428 Identities=15% Similarity=0.156 Sum_probs=274.0
Q ss_pred CCceEEEEEeccc---Ccc----ccccHHHHhhchHHHH--------HhCCC----eEEEEEecCCccccccCccEEEEE
Q 007212 83 VGLNILFVGTEVA---PWS----KTGGLGDVLGGLPPAL--------AANGH----RVMTIAPRYDQYKDAWDTDVVIEL 143 (612)
Q Consensus 83 ~~MkIl~v~~~~~---P~~----~~GG~~~~~~~L~~~L--------~~~Gh----~V~vit~~~~~~~~~~~~~~~~~~ 143 (612)
+.|||++|+...+ |.. .+||...|+.+|+++| +++|| +|+|+|...+.... .+....++.
T Consensus 254 ~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~-~~~~~~~e~ 332 (784)
T TIGR02470 254 MVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG-TTCNQRLEK 332 (784)
T ss_pred ccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc-ccccccccc
Confidence 3699999998762 211 2799999999999985 68999 77899976432110 000000000
Q ss_pred EeCCeeeEEEEEEeeecCceEEEEeCccccccccCCCCCcccCCCCCCCCchhhH---HHHHHHHHHHHHhh-hhccCCC
Q 007212 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL---RFSLLCQAALEAPR-ILNLNSN 219 (612)
Q Consensus 144 ~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~---r~~~~~~~~~~~~~-~l~~~~~ 219 (612)
....+|+++++++....- ... -..|..... ....|...+.+.++ ...
T Consensus 333 ------------~~~~~~~~I~rvp~g~~~---------~~~----~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~---- 383 (784)
T TIGR02470 333 ------------VYGTEHAWILRVPFRTEN---------GII----LRNWISRFEIWPYLETFAEDAEKEILAELQ---- 383 (784)
T ss_pred ------------ccCCCceEEEEecCCCCc---------ccc----cccccCHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 011235566655322100 000 001222221 12234444444333 222
Q ss_pred CccCCCCCCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCC
Q 007212 220 KYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGY 299 (612)
Q Consensus 220 ~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 299 (612)
++||+ ||+|.|..++++..++.. .++|.++|.|.+....... .....-.....+.
T Consensus 384 -------~~pDl-IHahy~d~glva~lla~~-------lgVP~v~t~HsL~~~K~~~-~g~~~~~~e~~~~--------- 438 (784)
T TIGR02470 384 -------GKPDL-IIGNYSDGNLVASLLARK-------LGVTQCTIAHALEKTKYPD-SDIYWQEFEDKYH--------- 438 (784)
T ss_pred -------CCCCE-EEECCCchHHHHHHHHHh-------cCCCEEEECCcchhhcccc-cccccccchhHHH---------
Confidence 35895 999999999999888876 4999999999764322110 0000000000000
Q ss_pred CCCcCCchhHHHHHHHhhCCEEEecCHHHHH----HHHc---Cc----------CCCccchhhhhccCeEEeeCCccCCC
Q 007212 300 NKPVRGRKINWMKAGILESDMVLTVSPHYAQ----ELVS---GE----------DKGVELDNIIRKTGIKGIVNGMDVQE 362 (612)
Q Consensus 300 ~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~----~l~~---~~----------~~G~~~~~~~~~~~i~vI~ngvd~~~ 362 (612)
....+......++.||.|||.|..... .+.+ .. ..|++. .+.++.+||+|+|...
T Consensus 439 ----~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~----~~~Ki~VVpPGVD~~i 510 (784)
T TIGR02470 439 ----FSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV----FDPKFNIVSPGADESI 510 (784)
T ss_pred ----hhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC----CcCCeEEECCCcChhh
Confidence 001122234678889999999975533 2211 00 012211 1238899999999998
Q ss_pred cCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEec
Q 007212 363 WNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGT 440 (612)
Q Consensus 363 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~ 440 (612)
|.|...+.-. .-....-.+....++.+.++.+|+..++++++|+++||++++||++.|++|+.++.. ++++|+|+|+
T Consensus 511 F~P~~~~~~r-~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGG 589 (784)
T TIGR02470 511 YFPYSDKEKR-LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAG 589 (784)
T ss_pred cCCCCchhhh-hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeC
Confidence 8775431000 000000001111234566788888766788999999999999999999999987643 5799999998
Q ss_pred CCh----------hHHHHHHHHHHHCC--CceEEEecc-ChHHHHHHH---H-hccEEEEcCCCCCCcHHHHHHHHcCCc
Q 007212 441 GKK----------PMEKQLEQLEILYP--EKARGVAKF-NIPLAHMII---A-GADFILIPSRFEPCGLIQLHAMRYGTV 503 (612)
Q Consensus 441 g~~----------~~~~~l~~l~~~~~--~~v~~~~~~-~~~~~~~i~---~-~aDv~v~pS~~E~~gl~~lEAma~G~P 503 (612)
+.. ...+.+.+++.+++ ++|.+.+.. +......++ + ++|++|+||++|+||++++|||+||+|
T Consensus 590 g~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlP 669 (784)
T TIGR02470 590 KLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLP 669 (784)
T ss_pred CcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCC
Confidence 642 13456777777765 677776653 333332333 3 468999999999999999999999999
Q ss_pred eEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh--hCHHHHHHHHHHHH---HhhcCcHHHHH
Q 007212 504 PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGM---AQDLSWKGPAK 578 (612)
Q Consensus 504 vI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~--~~~~~~~~~~~~~~---~~~fsw~~~a~ 578 (612)
||+|+.||+.|+|.++.+|+++ ++.|+++++++|.++++. .+++.+.+++++++ .++|||+..++
T Consensus 670 VVAT~~GG~~EiV~dg~tGfLV----------dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~ 739 (784)
T TIGR02470 670 TFATRFGGPLEIIQDGVSGFHI----------DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSE 739 (784)
T ss_pred EEEcCCCCHHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999986 999999999999998741 12677888888874 58999999999
Q ss_pred HHHHHH
Q 007212 579 KWEETL 584 (612)
Q Consensus 579 ~~~~~y 584 (612)
+++++.
T Consensus 740 ~ll~l~ 745 (784)
T TIGR02470 740 RLLTLA 745 (784)
T ss_pred HHHHHH
Confidence 999876
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=323.53 Aligned_cols=365 Identities=24% Similarity=0.238 Sum_probs=259.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++. |. .||.+.++.+|+++|+++||+|+|++...+...... ..++.+
T Consensus 1 mki~~~~~---p~--~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~-----------------------~~~~~~ 52 (371)
T cd04962 1 MKIGIVCY---PT--YGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY-----------------------SPNIFF 52 (371)
T ss_pred CceeEEEE---eC--CCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh-----------------------ccCeEE
Confidence 89999973 43 799999999999999999999999997532111100 011222
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
+.++.+.+.. + ....| .......+.+.++.. +||+ +|+|.+.....+
T Consensus 53 ~~~~~~~~~~--~---~~~~~--------------~~~~~~~l~~~i~~~-------------~~di-vh~~~~~~~~~~ 99 (371)
T cd04962 53 HEVEVPQYPL--F---QYPPY--------------DLALASKIAEVAKRY-------------KLDL-LHVHYAVPHAVA 99 (371)
T ss_pred EEecccccch--h---hcchh--------------HHHHHHHHHHHHhcC-------------CccE-EeecccCCccHH
Confidence 1111111000 0 00000 011223333444332 4895 899976655444
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
.++....... .++|+++++|+....- .+.. .....+.+..++.+|.++++
T Consensus 100 ~~~~~~~~~~---~~~~~i~~~h~~~~~~---------~~~~------------------~~~~~~~~~~~~~~d~ii~~ 149 (371)
T cd04962 100 AYLAREILGK---KDLPVVTTLHGTDITL---------VGQD------------------PSFQPATRFSIEKSDGVTAV 149 (371)
T ss_pred HHHHHHhcCc---CCCcEEEEEcCCcccc---------cccc------------------ccchHHHHHHHhhCCEEEEc
Confidence 4444322110 2789999999643210 0000 01123456778899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+...+.+.+. ++ . ..++.+||||+|...+.+.. +...+++++++. +.+
T Consensus 150 s~~~~~~~~~~--~~-~------~~~i~vi~n~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~ 198 (371)
T cd04962 150 SESLRQETYEL--FD-I------TKEIEVIPNFVDEDRFRPKP--------------------DEALKRRLGAPE--GEK 198 (371)
T ss_pred CHHHHHHHHHh--cC-C------cCCEEEecCCcCHhhcCCCc--------------------hHHHHHhcCCCC--CCe
Confidence 99999988752 11 1 22899999999987776543 234556777764 347
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccEE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
+++|+||+.+.||++.+++|++.+.+ .+++|+++|+|+ ..+.++++..+.+ +++.+.+.. +.+..+++.||++
T Consensus 199 ~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 199 VLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGP--ERSPAERLARELGLQDDVLFLGKQ--DHVEELLSIADLF 274 (371)
T ss_pred EEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCc--CHHHHHHHHHHcCCCceEEEecCc--ccHHHHHHhcCEE
Confidence 89999999999999999999999866 579999999987 3445566655543 457776643 3466899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 561 (612)
++||.+|++|++++|||++|+|||+|+.||..|++.++.+|+++ +++|+++++++|.+++++ ++.+.+
T Consensus 275 v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~ 342 (371)
T cd04962 275 LLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLV----------DVGDVEAMAEYALSLLED--DELWQE 342 (371)
T ss_pred EeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEc----------CCCCHHHHHHHHHHHHhC--HHHHHH
Confidence 99999999999999999999999999999999999999999976 899999999999999987 667777
Q ss_pred HHHHH---HHhhcCcHHHHHHHHHHHHHH
Q 007212 562 MMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 562 ~~~~~---~~~~fsw~~~a~~~~~~y~~l 587 (612)
|++++ +.++|||+.++++|.++|+++
T Consensus 343 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 343 FSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 77766 368999999999999999864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=325.36 Aligned_cols=362 Identities=17% Similarity=0.263 Sum_probs=262.2
Q ss_pred ceEEEEEecccCc--cccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007212 85 LNILFVGTEVAPW--SKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 85 MkIl~v~~~~~P~--~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
-||+|++++-.|. ...||++.++.++++.|+. +|+++|-..+.+++. +...+|+
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~---------------------~~~~~~~ 58 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEY---------------------TKVNDNC 58 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCCCCch---------------------hhccCCC
Confidence 4899998774443 4689999999999999953 999999886544442 0122456
Q ss_pred eEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccc
Q 007212 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~ 242 (612)
.++++..+..+.+..+ +.+. - +...+.+..+..+..... .++| |||+|+... +
T Consensus 59 ~~~~~~~~~~~~~~~~----~~~~---------~--~~~~~~~~~~~~~~~~~~----------~~~~-vi~v~~~~~-~ 111 (380)
T PRK15484 59 DIHYIGFSRIYKRLFQ----KWTR---------L--DPLPYSQRILNIAHKFTI----------TKDS-VIVIHNSMK-L 111 (380)
T ss_pred ceEEEEeccccchhhh----hhhc---------c--CchhHHHHHHHHHHhcCC----------CCCc-EEEEeCcHH-h
Confidence 6666633222111000 0000 0 011122223333322211 1357 589987322 1
Q ss_pred hHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
. ..++.. +.++|+++++|+... ...+..++.++
T Consensus 112 ~-~~~~~~------~~~~~~v~~~h~~~~----------------------------------------~~~~~~~~~ii 144 (380)
T PRK15484 112 Y-RQIRER------APQAKLVMHMHNAFE----------------------------------------PELLDKNAKII 144 (380)
T ss_pred H-HHHHhh------CCCCCEEEEEecccC----------------------------------------hhHhccCCEEE
Confidence 1 222222 157899999995311 11244679999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
++|+..++.+.+. + + ..++.+||||+|...|.+.. +..++++++++.+
T Consensus 145 ~~S~~~~~~~~~~---~-~------~~~i~vIpngvd~~~~~~~~--------------------~~~~~~~~~~~~~-- 192 (380)
T PRK15484 145 VPSQFLKKFYEER---L-P------NADISIVPNGFCLETYQSNP--------------------QPNLRQQLNISPD-- 192 (380)
T ss_pred EcCHHHHHHHHhh---C-C------CCCEEEecCCCCHHHcCCcc--------------------hHHHHHHhCCCCC--
Confidence 9999999988752 1 1 22799999999988876642 3456677887643
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCC-------hhHHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-------KPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~-------~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 473 (612)
.++|+|+||+.+.||++.|++|++++.+ ++++|+|+|+|. ..+.+.+++++.+++.++.+.+..+.+++..
T Consensus 193 ~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~ 272 (380)
T PRK15484 193 ETVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHN 272 (380)
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHH
Confidence 4789999999999999999999999865 789999999875 2356677788777777788888888888889
Q ss_pred HHHhccEEEEcCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 474 IIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 474 i~~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
+|+.||++++||.+ |+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++.|+++++++|.++++
T Consensus 273 ~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l---------~~~~d~~~la~~I~~ll~ 343 (380)
T PRK15484 273 YYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHL---------AEPMTSDSIISDINRTLA 343 (380)
T ss_pred HHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEE---------eCCCCHHHHHHHHHHHHc
Confidence 99999999999986 99999999999999999999999999999999999953 478999999999999999
Q ss_pred hhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+ ++ +.++++++ +.++|||+.++++|+++|++..
T Consensus 344 d--~~-~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 344 D--PE-LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred C--HH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 8 33 24566655 5789999999999999998754
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=327.23 Aligned_cols=275 Identities=20% Similarity=0.231 Sum_probs=220.1
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+ ||+|.++.+.+...++.... .+.|++++.|+...... .. ....
T Consensus 118 ~~di-ihaH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~~---------~~------------------~~~~ 164 (406)
T PRK15427 118 VADV-FIAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISSR---------EV------------------LNHY 164 (406)
T ss_pred CCCE-EEEcCChHHHHHHHHHHhCC-----CCCCeEEEEcccccccc---------hh------------------hhhh
Confidence 4895 99998877766666654211 24467889996432100 00 0001
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHH
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
..+++..++++|.++++|+..++.+.+ +|++.+ ++.+||||+|.+.|.+....
T Consensus 165 ~~~~~~~~~~ad~vv~~S~~~~~~l~~---~g~~~~------ki~vi~nGvd~~~f~~~~~~------------------ 217 (406)
T PRK15427 165 TPEYQQLFRRGDLMLPISDLWAGRLQK---MGCPPE------KIAVSRMGVDMTRFSPRPVK------------------ 217 (406)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCHH------HEEEcCCCCCHHHcCCCccc------------------
Confidence 124566788999999999999999986 576655 89999999999888654210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEE
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGV 463 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~ 463 (612)
...+.+.|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+ .++.++++..+++ +++.+.
T Consensus 218 -----------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~--~~~~l~~~~~~~~l~~~V~~~ 284 (406)
T PRK15427 218 -----------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP--WERRLRTLIEQYQLEDVVEMP 284 (406)
T ss_pred -----------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch--hHHHHHHHHHHcCCCCeEEEe
Confidence 01234689999999999999999999999975 689999999998 5667777776654 568888
Q ss_pred eccChHHHHHHHHhccEEEEcCCC------CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCC
Q 007212 464 AKFNIPLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~ 537 (612)
+..+.+++..+++.||++|+||.. |++|++++|||+||+|||+|+.||++|++.++.+|+++ ++
T Consensus 285 G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv----------~~ 354 (406)
T PRK15427 285 GFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV----------PE 354 (406)
T ss_pred CCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe----------CC
Confidence 888888888999999999999974 99999999999999999999999999999999999976 99
Q ss_pred CCHHHHHHHHHHHHH-hhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHH
Q 007212 538 VDVAAVSTTVRRALA-TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 538 ~d~~~la~~i~~ll~-~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l 587 (612)
+|+++|+++|.++++ + ++.+.+|++++ +.++|+|+..++++.++|+++
T Consensus 355 ~d~~~la~ai~~l~~~d--~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 355 NDAQALAQRLAAFSQLD--TDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 999999999999999 7 56667777766 579999999999999999863
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=338.82 Aligned_cols=323 Identities=17% Similarity=0.191 Sum_probs=223.1
Q ss_pred CCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCc
Q 007212 227 GKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 227 ~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+.||+ ||+|+|..++++..++... ++|+|+|.|.+.-.... .....+-.....+ .. . .
T Consensus 407 ~~PDl-IHaHYwdsg~vA~~La~~l-------gVP~v~T~HsL~k~K~~-~~~~~~~~~e~~y----------~~--~-~ 464 (815)
T PLN00142 407 GKPDL-IIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTKYP-DSDIYWKKFDDKY----------HF--S-C 464 (815)
T ss_pred CCCCE-EEECCccHHHHHHHHHHHh-------CCCEEEEcccchhhhcc-ccCCcccccchhh----------hh--h-h
Confidence 35895 9999999999999999874 99999999977532211 0000000001110 00 0 1
Q ss_pred hhHHHHHHHhhCCEEEecCHHHHHHH-------HcCcCCCcc-chhhh-----hccCeEEeeCCccCCCcCCCccc--cc
Q 007212 307 KINWMKAGILESDMVLTVSPHYAQEL-------VSGEDKGVE-LDNII-----RKTGIKGIVNGMDVQEWNPLTDK--YI 371 (612)
Q Consensus 307 ~~~~~k~~l~~ad~vi~vS~~~~~~l-------~~~~~~G~~-~~~~~-----~~~~i~vI~ngvd~~~~~p~~~~--~~ 371 (612)
.+......+..||.||+.|......+ .+...++.+ +..++ -..++.+|++|+|...|.|...+ .+
T Consensus 465 r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl 544 (815)
T PLN00142 465 QFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRL 544 (815)
T ss_pred chHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhH
Confidence 23345668889999999998776422 221111111 00000 02288999999999999875421 00
Q ss_pred ccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecC-Ch-----
Q 007212 372 GVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTG-KK----- 443 (612)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g-~~----- 443 (612)
..-++. .+....++...++.+|+..++++++|+++||+.++||++.|++|+.++.+ ++++|+|+|++ ++
T Consensus 545 ~~l~n~---I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d 621 (815)
T PLN00142 545 TSLHPS---IEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKD 621 (815)
T ss_pred Hhhccc---chhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCcccccccc
Confidence 000000 01112233445567887666677899999999999999999999998754 57999999987 21
Q ss_pred -hH---HHHHHHHHHHCC--CceEEEeccC----hHHHHHHHH-hccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCc
Q 007212 444 -PM---EKQLEQLEILYP--EKARGVAKFN----IPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 512 (612)
Q Consensus 444 -~~---~~~l~~l~~~~~--~~v~~~~~~~----~~~~~~i~~-~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~ 512 (612)
+. .+.+.+++.+++ +++.+.+... .+.+..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||+
T Consensus 622 ~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~ 701 (815)
T PLN00142 622 REEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGP 701 (815)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCH
Confidence 11 244666666654 5677665432 234444555 579999999999999999999999999999999999
Q ss_pred ccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh--hCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHH
Q 007212 513 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNG---MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 513 ~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~--~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y 584 (612)
.|+|.+|.+|+++ ++.|+++++++|.++++. .+++.+.+|++++ +.++|||+.++++++++.
T Consensus 702 ~EIV~dG~tG~LV----------~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 702 AEIIVDGVSGFHI----------DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999986 999999999999876631 1267888888887 357899999999999865
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=311.86 Aligned_cols=381 Identities=23% Similarity=0.290 Sum_probs=266.9
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
.+++++.+...+|. .||.+.++.+|+++|+++||+|+|+++..+...... ....+|+.
T Consensus 6 ~~~~~~~~~~~~~~--~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~--------------------~~~~~~~~ 63 (398)
T cd03800 6 SLHGSPLAQPGGAD--TGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI--------------------VELAPGVR 63 (398)
T ss_pred eccccccccCCCCC--CCceeehHHHHHHHHhccCceEEEEEecCCcccCCc--------------------cccccceE
Confidence 35555555544454 799999999999999999999999997643211100 11123555
Q ss_pred EEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccch
Q 007212 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~ 243 (612)
++.+....... + . . ......+..+...+...++... .+||+ ||+|.+..+..
T Consensus 64 ~~~~~~~~~~~----------~-~--~---~~~~~~~~~~~~~~~~~~~~~~-----------~~~Di-v~~~~~~~~~~ 115 (398)
T cd03800 64 VVRVPAGPAEY----------L-P--K---EELWPYLDEFADDLLRFLRREG-----------GRPDL-IHAHYWDSGLV 115 (398)
T ss_pred EEecccccccC----------C-C--h---hhcchhHHHHHHHHHHHHHhcC-----------CCccE-EEEecCccchH
Confidence 55543211100 0 0 0 0000011123444444444321 14895 89998888877
Q ss_pred HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEe
Q 007212 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~ 323 (612)
+..++.. .++|+|++.|+........ ...... .........++..++.+|.+++
T Consensus 116 ~~~~~~~-------~~~~~i~~~h~~~~~~~~~------~~~~~~-------------~~~~~~~~~~~~~~~~ad~ii~ 169 (398)
T cd03800 116 ALLLARR-------LGIPLVHTFHSLGAVKRRH------LGAADT-------------YEPARRIEAEERLLRAADRVIA 169 (398)
T ss_pred HHHHHhh-------cCCceEEEeecccccCCcc------cccccc-------------cchhhhhhHHHHHHhhCCEEEE
Confidence 7766654 4899999999654311100 000000 0001122345667889999999
Q ss_pred cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007212 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 403 (612)
+|+...+.+.+. ++.. ..++.+|+||+|.+.|.+... ....+++.+.+. +.
T Consensus 170 ~s~~~~~~~~~~--~~~~------~~~~~vi~ng~~~~~~~~~~~-------------------~~~~~~~~~~~~--~~ 220 (398)
T cd03800 170 STPQEAEELYSL--YGAY------PRRIRVVPPGVDLERFTPYGR-------------------AEARRARLLRDP--DK 220 (398)
T ss_pred cCHHHHHHHHHH--cccc------ccccEEECCCCCccceecccc-------------------hhhHHHhhccCC--CC
Confidence 999998888752 2222 126899999999988866532 111144444443 45
Q ss_pred cEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChh----HHHHHHHHHHHCC--CceEEEeccChHHHHHHH
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EKARGVAKFNIPLAHMII 475 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~ 475 (612)
++|+|+||+.+.||++.+++|+..+.+ ++++|+++|++... ....++++...++ +++.+.+..+.+++..++
T Consensus 221 ~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 300 (398)
T cd03800 221 PRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALY 300 (398)
T ss_pred cEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHH
Confidence 899999999999999999999999975 68999999987632 2344555555543 568888888888888999
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007212 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 555 (612)
+.||++++||..|++|++++|||++|+|||+++.+|..|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 301 ~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~-- 368 (398)
T cd03800 301 RAADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLV----------DPRDPEALAAALRRLLTD-- 368 (398)
T ss_pred HhCCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEe----------CCCCHHHHHHHHHHHHhC--
Confidence 99999999999999999999999999999999999999999999999987 899999999999999998
Q ss_pred HHHHHHHHHHHH---HhhcCcHHHHHHHH
Q 007212 556 TQALAEMMKNGM---AQDLSWKGPAKKWE 581 (612)
Q Consensus 556 ~~~~~~~~~~~~---~~~fsw~~~a~~~~ 581 (612)
++.+.++++++. .++|||+.++++|+
T Consensus 369 ~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 369 PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 667777777763 48999999999986
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=309.85 Aligned_cols=228 Identities=15% Similarity=0.172 Sum_probs=182.7
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
...+..+|.++++|+..++.+.+. + ..++.+||||+|.+.|.|.... ....
T Consensus 151 ~~~~~~ad~vi~~s~~~~~~~~~~--~---------~~ki~vI~ngvd~~~f~~~~~~------------------~~~~ 201 (396)
T cd03818 151 LLALAQADAGVSPTRWQRSTFPAE--L---------RSRISVIHDGIDTDRLRPDPQA------------------RLRL 201 (396)
T ss_pred HHHHHhCCEEECCCHHHHhhCcHh--h---------ccceEEeCCCccccccCCCchh------------------hhcc
Confidence 456889999999999999987641 1 1289999999999998775321 1111
Q ss_pred HHHhCCCCCCCCcEEEEEcc-CccccCHHHHHHHHHhccc--CCeEEEEEecCCh-----------hHHHHHHHHHHHC-
Q 007212 392 QAEVGLPVDRNIPVIGFIGR-LEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-----------PMEKQLEQLEILY- 456 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~iGr-l~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~-----------~~~~~l~~l~~~~- 456 (612)
+...++. ++.++|+|+|| +.++||++.+++|++.+.+ ++++|+|+|++.. ..++.++++....
T Consensus 202 ~~~~~~~--~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 279 (396)
T cd03818 202 PNGRVLT--PGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD 279 (396)
T ss_pred cccccCC--CCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccC
Confidence 2222222 24579999998 9999999999999999865 7999999997421 1233445554322
Q ss_pred CCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCC
Q 007212 457 PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 457 ~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~ 536 (612)
.+++.+.+..+.+++..+|+.||++++||..|++|++++|||+||+|||+|+.||+.|++.++.+|+++ +
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv----------~ 349 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLV----------D 349 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEc----------C
Confidence 256888888888888899999999999999999999999999999999999999999999999999976 9
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHH
Q 007212 537 PVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 537 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~ 582 (612)
+.|+++++++|.+++++ ++.+.+|++++ +.++|||+.++++|++
T Consensus 350 ~~d~~~la~~i~~ll~~--~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 350 FFDPDALAAAVIELLDD--PARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred CCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 99999999999999998 56666777666 4577999999999863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=324.68 Aligned_cols=475 Identities=20% Similarity=0.261 Sum_probs=354.3
Q ss_pred eEEEEEecccCc----cccccHHHHhhchHHHHHhCCCeEEEEEecCCc-cc------cc--------cC-------c--
Q 007212 86 NILFVGTEVAPW----SKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YK------DA--------WD-------T-- 137 (612)
Q Consensus 86 kIl~v~~~~~P~----~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~-~~------~~--------~~-------~-- 137 (612)
-+++.+.||+=. ...||+|...+...++++..|...+-++..|.+ |. +. |+ .
T Consensus 87 ~~aYFs~E~gl~~~lpiYsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~~ 166 (778)
T cd04299 87 VAAYFSMEFGLHESLPIYSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPVR 166 (778)
T ss_pred eeEEeccccccCCCCCccCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEEe
Confidence 344887765422 258999999999999999999999999876541 11 11 21 1
Q ss_pred -----cEEEEEEeCCeeeEEEEEEeeecCceEEEEeCccccccccCCCCC-cccCCCCCCCCchhhHH---HHHHHHHHH
Q 007212 138 -----DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLR---FSLLCQAAL 208 (612)
Q Consensus 138 -----~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~g~~~~-~~y~~~~g~~~~~~~~r---~~~~~~~~~ 208 (612)
...+.+.+.++...++.+.....+|+++++|++..-...|.+... .+|++ |+..| +.+|+.+++
T Consensus 167 ~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg~-------D~~~Rl~Qe~~Lg~agl 239 (778)
T cd04299 167 DADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENSPDDRGITDRLYGG-------DQETRIQQEILLGIGGV 239 (778)
T ss_pred cCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccchhhcccccCCCCC-------cHHHHHHHHHHHHHHHH
Confidence 235677788888889999988899999999998753333433322 47863 35566 589999999
Q ss_pred HHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHHHHHh-hhcCCCC-------cCCceEEEEEecCCccc--ccCcc
Q 007212 209 EAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFE 278 (612)
Q Consensus 209 ~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~ 278 (612)
++++.+++ +||| ||+||||+++++..+.+ +.+..|+ ..+..++||+|++.++| .|+..
T Consensus 240 ~~Lr~lg~-----------~pdV-iH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~ 307 (778)
T cd04299 240 RALRALGI-----------KPTV-YHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPD 307 (778)
T ss_pred HHHHHhCC-----------CCeE-EEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHH
Confidence 99998865 4895 99999999999993222 1111111 12578999999999999 89877
Q ss_pred cccc--------cCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHH---HHHHHcCcCCCccchhhhh
Q 007212 279 DFGL--------LNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY---AQELVSGEDKGVELDNIIR 347 (612)
Q Consensus 279 ~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~---~~~l~~~~~~G~~~~~~~~ 347 (612)
.+.. ++++......+.....-. ....+++++.++..|+.+.+||+-+ .+++......|.+.+
T Consensus 308 l~~~~~~~~~~~lgl~~~~~~~lg~e~~~~---~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~---- 380 (778)
T cd04299 308 LVERYFGPYARELGLSRDRFLALGRENPGD---DPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVE---- 380 (778)
T ss_pred HHHHHhhHHHHHcCCCHHHHhhhccccccC---ccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcc----
Confidence 6632 566554322221111000 0135799999999999999999988 555443223344332
Q ss_pred ccCeEEeeCCccCCCcC-CCcccccccccC---------------------cchhhhccHHHHHHHHHHh----------
Q 007212 348 KTGIKGIVNGMDVQEWN-PLTDKYIGVKYD---------------------ASTVMDAKPLLKEALQAEV---------- 395 (612)
Q Consensus 348 ~~~i~vI~ngvd~~~~~-p~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~~~---------- 395 (612)
..+|..|.||||...|. |..++.+ .+|. ......+|..+|.+|.+.+
T Consensus 381 ~~~i~~ITNGVh~~~W~~P~~~~l~-~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~ 459 (778)
T cd04299 381 EVPIGHVTNGVHVPTWVAPEMRELY-DRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLR 459 (778)
T ss_pred cCceeceeCCcchhhhcCHHHHHHH-HHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 33799999999999998 7665544 3331 2234467778888776664
Q ss_pred -----------CCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCC------hhHHHHHHHH
Q 007212 396 -----------GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQL 452 (612)
Q Consensus 396 -----------gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~------~~~~~~l~~l 452 (612)
+.+.+++.++|+|++|+.++||.+++++.+..+.+ .++|||++|.+. +.+.+.+.++
T Consensus 460 ~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~ 539 (778)
T cd04299 460 RGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEF 539 (778)
T ss_pred cCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHH
Confidence 55667788999999999999999999999888744 479999999987 5677899999
Q ss_pred HH--HCCCceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEeccc
Q 007212 453 EI--LYPEKARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF 528 (612)
Q Consensus 453 ~~--~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~ 528 (612)
+. .+++++.++..|+..+++.++++||++++||+ +|+||++.+-||..|.+-+++-.|...|.. ++.|||.||.-
T Consensus 540 a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 540 SRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred HhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 88 66789999999999999999999999999999 899999999999999999999999999987 78999999852
Q ss_pred cc--ccccCCCCCHHHHHHHHHHHHH-hh-C------HHHHHHHHHHHHHh---hcCcHHHHHHHHH-HHHHHH
Q 007212 529 SV--DCEAVDPVDVAAVSTTVRRALA-TY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEE-TLLNLE 588 (612)
Q Consensus 529 ~~--~~~~v~~~d~~~la~~i~~ll~-~~-~------~~~~~~~~~~~~~~---~fsw~~~a~~~~~-~y~~l~ 588 (612)
.. |.+.-|..|.++|.+.|++.+- .+ + +..+.+|.++++.. .|||.+++++|.+ +|.-+.
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p~~ 692 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYLPAA 692 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHHHHH
Confidence 21 3334455788888899976544 22 1 45799999999877 9999999999887 454443
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=309.30 Aligned_cols=230 Identities=20% Similarity=0.226 Sum_probs=184.4
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (612)
....+|.++++|+..++.+.+. +|++.+ ++.+|+||+|.+.|.|.... +...++
T Consensus 133 ~~~~~~~~i~vs~~~~~~~~~~--~~~~~~------~~~vi~ngvd~~~~~~~~~~------------------~~~~~~ 186 (374)
T TIGR03088 133 YRPLIHHYVAVSRDLEDWLRGP--VKVPPA------KIHQIYNGVDTERFHPSRGD------------------RSPILP 186 (374)
T ss_pred HHhcCCeEEEeCHHHHHHHHHh--cCCChh------hEEEeccCccccccCCCccc------------------hhhhhH
Confidence 3456899999999999988752 455433 89999999999888765311 112222
Q ss_pred HhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEec
Q 007212 394 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAK 465 (612)
Q Consensus 394 ~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~ 465 (612)
+...+ ++.++|+|+||+.++||++.+++|++++.+ ++++|+++|+|+ ..+.++++...++ +.+.+.+
T Consensus 187 ~~~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g- 261 (374)
T TIGR03088 187 PDFFA--DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP--ARGACEQMVRAAGLAHLVWLPG- 261 (374)
T ss_pred hhcCC--CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc--hHHHHHHHHHHcCCcceEEEcC-
Confidence 22233 245899999999999999999999998854 278999999987 4456666666554 3344433
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHH
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~ 545 (612)
+ .++...+++.||++++||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ +++|++++++
T Consensus 262 ~-~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~----------~~~d~~~la~ 330 (374)
T TIGR03088 262 E-RDDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALV----------PPGDAVALAR 330 (374)
T ss_pred C-cCCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEe----------CCCCHHHHHH
Confidence 3 3456689999999999999999999999999999999999999999999999999987 8999999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l 587 (612)
+|.+++++ ++.+.++++++ +.++|||+.++++|+++|+++
T Consensus 331 ~i~~l~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 331 ALQPYVSD--PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 99999987 55666666665 468999999999999999876
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=300.16 Aligned_cols=330 Identities=18% Similarity=0.204 Sum_probs=236.9
Q ss_pred ceEEEEEecccC--ccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007212 85 LNILFVGTEVAP--WSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 85 MkIl~v~~~~~P--~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
|||++|++++.| ....||.+.++.+|+++|.++||+|+++++........ .. .
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~-----------------~~--~------ 55 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAP-----------------LV--P------ 55 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccc-----------------ee--e------
Confidence 899999998744 23489999999999999999999999999863321110 00 0
Q ss_pred eEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccc
Q 007212 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~ 242 (612)
. ........ +...............+.++.. +||+ ||+|.+....
T Consensus 56 -~--~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~-------------~~Di-vh~~~~~~~~ 100 (335)
T cd03802 56 -V--VPEPLRLD------------------APGRDRAEAEALALAERALAAG-------------DFDI-VHNHSLHLPL 100 (335)
T ss_pred -c--cCCCcccc------------------cchhhHhhHHHHHHHHHHHhcC-------------CCCE-EEecCcccch
Confidence 0 00000000 0000111112222233333332 4895 8999877766
Q ss_pred hHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
. +... .+.|+++++|+...... ..........+.++
T Consensus 101 ~---~~~~-------~~~~~v~~~h~~~~~~~----------------------------------~~~~~~~~~~~~~~ 136 (335)
T cd03802 101 P---FARP-------LPVPVVTTLHGPPDPEL----------------------------------LKLYYAARPDVPFV 136 (335)
T ss_pred h---hhcc-------cCCCEEEEecCCCCccc----------------------------------chHHHhhCcCCeEE
Confidence 5 2221 48899999996543110 01233456788999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
++|+...+.+.. . .++.+||||+|.+.|.+.. .+
T Consensus 137 ~~s~~~~~~~~~---~----------~~~~vi~ngvd~~~~~~~~---------------------------------~~ 170 (335)
T cd03802 137 SISDAQRRPWPP---L----------PWVATVHNGIDLDDYPFRG---------------------------------PK 170 (335)
T ss_pred EecHHHHhhccc---c----------cccEEecCCcChhhCCCCC---------------------------------CC
Confidence 999999887764 1 2899999999998886532 13
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChh--HHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP--MEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~--~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
...|+|+||+.+.||++.++++++.. +++|+|+|.|+.. ....+.+... ..+++.+.+..+.+++..+++.+|+
T Consensus 171 ~~~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~~~~~~~~~~~~~~-~~~~v~~~G~~~~~~~~~~~~~~d~ 246 (335)
T cd03802 171 GDYLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSDPDYFYREIAPELL-DGPDIEYLGEVGGAEKAELLGNARA 246 (335)
T ss_pred CCEEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCCHHHHHHHHHHhcc-cCCcEEEeCCCCHHHHHHHHHhCcE
Confidence 46899999999999999999998764 7999999998621 1222222211 2467999998888888899999999
Q ss_pred EEEcCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007212 481 ILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 481 ~v~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 559 (612)
+++||.+ |+||++++|||+||+|||+++.||..|++.++.+|+++ ++ +++++++|.++++. .
T Consensus 247 ~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~----------~~--~~~l~~~l~~l~~~--~--- 309 (335)
T cd03802 247 LLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLV----------DS--VEELAAAVARADRL--D--- 309 (335)
T ss_pred EEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEe----------CC--HHHHHHHHHHHhcc--H---
Confidence 9999985 99999999999999999999999999999999999986 54 99999999998764 2
Q ss_pred HHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 560 AEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 560 ~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
.+.+++...++|||+.++++|+++|+
T Consensus 310 ~~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 310 RAACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 12334446799999999999999984
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=312.90 Aligned_cols=380 Identities=14% Similarity=0.087 Sum_probs=238.4
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCC-CeEEEEEecCCccccc--cCccEEEEEEeCCeeeEEEEEEee
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPRYDQYKDA--WDTDVVIELKVGDKIEKVRFFHCH 158 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G-h~V~vit~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 158 (612)
.++|||++++..|.|| .+|+...+..++..|+++| |+|+||+|.++...+. |.. ++......+...+.+ .
T Consensus 2 ~~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~----~~~f~~~~~~e~~~~-~ 74 (462)
T PLN02846 2 QKKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPN----KITFSSPSEQEAYVR-Q 74 (462)
T ss_pred CCCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccc----cccccCchhhhhhhh-h
Confidence 3579999999999999 9999999999999999999 8999999987532110 100 000000000000000 0
Q ss_pred ecCceEEEEeCccccccccCCCCCcccCCCCCCCCchhh---HHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEe
Q 007212 159 KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQ---LRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVA 235 (612)
Q Consensus 159 ~~gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~---~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~ 235 (612)
..+-+++++....+ ..| .+.. .+.......+.+.++.+ +||+ ||+
T Consensus 75 ~~~~~v~r~~s~~~----------p~y--------p~r~~~~~r~~~~~~~i~~~l~~~-------------~pDV-IHv 122 (462)
T PLN02846 75 WLEERISFLPKFSI----------KFY--------PGKFSTDKRSILPVGDISETIPDE-------------EADI-AVL 122 (462)
T ss_pred hccCeEEEeccccc----------ccC--------cccccccccccCChHHHHHHHHhc-------------CCCE-EEE
Confidence 00112222221111 011 1100 11111223344445443 4895 888
Q ss_pred CC-CcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHH
Q 007212 236 ND-WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG 314 (612)
Q Consensus 236 h~-~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 314 (612)
|+ ++.+.+..-.+... +-.++|.+.|.... .- +...+. +.... ....++...
T Consensus 123 ~tP~~LG~~~~g~~~~~------k~~~vV~tyHT~y~-~Y-----~~~~~~------------g~~~~---~l~~~~~~~ 175 (462)
T PLN02846 123 EEPEHLTWYHHGKRWKT------KFRLVIGIVHTNYL-EY-----VKREKN------------GRVKA---FLLKYINSW 175 (462)
T ss_pred cCchhhhhHHHHHHHHh------cCCcEEEEECCChH-HH-----HHHhcc------------chHHH---HHHHHHHHH
Confidence 85 44444311111111 12348889996221 00 000000 00000 011111122
Q ss_pred H--hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 315 I--LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 315 l--~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
+ ..+|.++++|....+ +.. .+...++|||.+.|.|... ..+
T Consensus 176 ~~r~~~d~vi~pS~~~~~-l~~---------------~~i~~v~GVd~~~f~~~~~---------------------~~~ 218 (462)
T PLN02846 176 VVDIYCHKVIRLSAATQD-YPR---------------SIICNVHGVNPKFLEIGKL---------------------KLE 218 (462)
T ss_pred HHHHhcCEEEccCHHHHH-Hhh---------------CEEecCceechhhcCCCcc---------------------cHh
Confidence 2 248999999986655 443 3344568999998887632 122
Q ss_pred HHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHH
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 470 (612)
+..+ +.+.-.+.++|+|||.++||++.|++|++++.+ ++++|+|+|+|+ .++.+++++.+++..+.++.++....
T Consensus 219 ~~~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp--~~~~L~~~a~~l~l~~~vf~G~~~~~ 295 (462)
T PLN02846 219 QQKN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE--DSDEVKAAAEKLELDVRVYPGRDHAD 295 (462)
T ss_pred hhcC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc--cHHHHHHHHHhcCCcEEEECCCCCHH
Confidence 2222 222113479999999999999999999999865 689999999998 66778888777664344455554332
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHH
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~l 550 (612)
.+++.+|+||+||..|++|++++||||||+|||+++.++ .+++.++.+|+.+ .|.++++++|.++
T Consensus 296 --~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~------------~~~~~~a~ai~~~ 360 (462)
T PLN02846 296 --PLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTY------------DDGKGFVRATLKA 360 (462)
T ss_pred --HHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEec------------CCHHHHHHHHHHH
Confidence 589999999999999999999999999999999999997 5999999999964 6899999999999
Q ss_pred HHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 551 LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
+++. +..+ ..+ ..+.|||+..+++++++|+--
T Consensus 361 l~~~-~~~~---~~~-a~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 361 LAEE-PAPL---TDA-QRHELSWEAATERFLRVADLD 392 (462)
T ss_pred HccC-chhH---HHH-HHHhCCHHHHHHHHHHHhccC
Confidence 9863 2222 222 236899999999999999843
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=307.45 Aligned_cols=229 Identities=16% Similarity=0.179 Sum_probs=183.2
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+.+..++.+|.++++|+..++.+.+. ++.. ....+.+|+||+|.+.|.|.... .
T Consensus 147 ~e~~~~~~ad~ii~~s~~~~~~~~~~--~~~~-----~~~~~~vi~n~vd~~~~~~~~~~-------------------~ 200 (392)
T cd03805 147 LEEFTTGMADKIVVNSNFTASVFKKT--FPSL-----AKNPREVVYPCVDTDSFESTSED-------------------P 200 (392)
T ss_pred HHHHHhhCceEEEEcChhHHHHHHHH--hccc-----ccCCcceeCCCcCHHHcCccccc-------------------c
Confidence 34567889999999999999988752 2211 11145699999999888664321 0
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc-----CCeEEEEEecCCh------hHHHHHHHHHHH-C-
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-----ENVQIIVLGTGKK------PMEKQLEQLEIL-Y- 456 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~-----~~~~lvivG~g~~------~~~~~l~~l~~~-~- 456 (612)
..+....+ .+.++|+++||+.+.||++.+++|++++.+ ++++|+++|+|+. .+.+.++++..+ .
T Consensus 201 -~~~~~~~~--~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~ 277 (392)
T cd03805 201 -DPGLLIPK--SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLL 277 (392)
T ss_pred -cccccccC--CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcC
Confidence 11122222 245899999999999999999999999864 4899999998763 345677777666 3
Q ss_pred -CCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccC
Q 007212 457 -PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 457 -~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v 535 (612)
.+++.+.+..+.+++..+++.||++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~---------- 347 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLC---------- 347 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEe----------
Confidence 357899998888888899999999999999999999999999999999999999999999999999975
Q ss_pred CCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHH
Q 007212 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKW 580 (612)
Q Consensus 536 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~ 580 (612)
++ |+++++++|.+++++ ++.+.++++++ +.++|||+.+++++
T Consensus 348 ~~-~~~~~a~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 348 EP-TPEEFAEAMLKLAND--PDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred CC-CHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 55 999999999999998 55667777766 46899999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=302.61 Aligned_cols=275 Identities=18% Similarity=0.172 Sum_probs=203.3
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+ +|+|++....++...+ . .++|++++.|+..... ....
T Consensus 85 ~~Dv-v~~h~~~~~~~~~~~~-~-------~~~~~i~~~H~~~~~~------------------------------~~~~ 125 (372)
T cd03792 85 DADV-VVIHDPQPLALPLFKK-K-------RGRPWIWRCHIDLSSP------------------------------NRRV 125 (372)
T ss_pred CCCE-EEECCCCchhHHHhhh-c-------CCCeEEEEeeeecCCC------------------------------cHHH
Confidence 5895 8999887433322221 1 3789999999532100 0012
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCC-cCCCcccccccccCcchhhhccHH
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQE-WNPLTDKYIGVKYDASTVMDAKPL 386 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~-~~p~~~~~~~~~~~~~~~~~~~~~ 386 (612)
+.+++..++.+|.+++.|..+.. .++.. .++ +||||+|... +... ++ +.
T Consensus 126 ~~~~~~~~~~~d~~i~~~~~~~~-------~~~~~------~~~-vipngvd~~~~~~~~--------~~--------~~ 175 (372)
T cd03792 126 WDFLQPYIEDYDAAVFHLPEYVP-------PQVPP------RKV-IIPPSIDPLSGKNRE--------LS--------PA 175 (372)
T ss_pred HHHHHHHHHhCCEEeecHHHhcC-------CCCCC------ceE-EeCCCCCCCccccCC--------CC--------HH
Confidence 34566778899999998843322 22221 144 9999999653 1111 11 11
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCCh---hHHHHHHHHHHH--CCCc
Q 007212 387 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEIL--YPEK 459 (612)
Q Consensus 387 ~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~--~~~~ 459 (612)
....+++++|++. +.++|+++||+.++||++.+++|++.+.+ ++++|+|+|+|+. +..+.++++... ..++
T Consensus 176 ~~~~~~~~~~~~~--~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 176 DIEYILEKYGIDP--ERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPD 253 (372)
T ss_pred HHHHHHHHhCCCC--CCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCC
Confidence 2445677888865 44899999999999999999999998865 6899999999852 233334444422 3345
Q ss_pred eEEEecc--ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCC
Q 007212 460 ARGVAKF--NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 460 v~~~~~~--~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~ 537 (612)
+.+.+.. +.+++..+++.||++++||.+|+||++++|||+||+|||+|+.+|..+++.++.+|+++ +
T Consensus 254 v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~----------~- 322 (372)
T cd03792 254 IHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLV----------D- 322 (372)
T ss_pred eEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEe----------C-
Confidence 7777665 67888899999999999999999999999999999999999999999999999999975 3
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHH
Q 007212 538 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 538 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l 587 (612)
+.++++++|.+++++ ++.+++|++++ +.++|||+.++++|+++|+++
T Consensus 323 -~~~~~a~~i~~ll~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 323 -TVEEAAVRILYLLRD--PELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred -CcHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 567889999999987 66777777776 457999999999999999863
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=306.16 Aligned_cols=382 Identities=14% Similarity=0.127 Sum_probs=233.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
||||+|... ...||.|..+.+|++.|.++||+|.++..+......... .+++..
T Consensus 1 mkil~i~~~----l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~----------------------~~~~~~ 54 (405)
T PRK10125 1 MNILQFNVR----LAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVS----------------------HQNYPQ 54 (405)
T ss_pred CeEEEEEee----ecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccc----------------------cCCcce
Confidence 899999975 347999999999999999999999999987332111000 001111
Q ss_pred EEEeCc-------cccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCC
Q 007212 165 VFVDHP-------WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAND 237 (612)
Q Consensus 165 ~~v~~~-------~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~ 237 (612)
.....+ ..+.|+.++.+ ++ -..+..+.+.. .+ +||| ||+|.
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~---~~----------------~~~~~~~~i~~-~~-----------~pDv-iHlH~ 102 (405)
T PRK10125 55 VIKHTPRMTAMANIALFRLFNRDL---FG----------------NFNELYRTITR-TP-----------GPVV-LHFHV 102 (405)
T ss_pred EEEecccHHHHHHHHHHHhcchhh---cc----------------hHHHHHHHHhh-cc-----------CCCE-EEEec
Confidence 100000 01111111000 00 01112222211 22 4895 99998
Q ss_pred CcccchHHH--HHh--hhcCCCCcCCceEEEEEecCCc-ccccCccc-ccccCCCcccccccccccCCCC-C------cC
Q 007212 238 WHTSLIPCY--LKT--MYKPKGMYKSAKVVFCIHNIAY-QGRFAFED-FGLLNLPAQFKSSFDFIDGYNK-P------VR 304 (612)
Q Consensus 238 ~~~~~~~~~--l~~--~~~~~~~~~~~pvv~~iH~~~~-~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~-~------~~ 304 (612)
.+.+++... ++. ..+.. ..++|+|+|+|+... .|.+.... .. ++....... ....+|.. . .+
T Consensus 103 ~~~~~~~~~~l~~~~~~~~~~--~~~~piV~TlHd~~~~tg~c~~~~~C~--~~~~~c~~C-p~l~~~~~~~~d~~~~~~ 177 (405)
T PRK10125 103 LHSYWLNLKSVVRFCEKVKNH--KPDVTLVWTLHDHWSVTGRCAFTDGCE--GWKTGCQKC-PTLNNYPPVKVDRAHQLV 177 (405)
T ss_pred ccCceecHHHHHHHHhhhhcc--cCCCCEEEecccccccCCCcCCCcccc--cccccCCCC-CCccCCCCCccchHHHHH
Confidence 887644332 111 00001 147899999998753 33333210 00 000000000 00000100 0 01
Q ss_pred CchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhcc
Q 007212 305 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 305 ~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
.++..+.+...+.++.++++|+..++.+.+. ++. .++.+||||+|+..+.+...
T Consensus 178 ~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~--~~~--------~~i~vI~NGid~~~~~~~~~---------------- 231 (405)
T PRK10125 178 AGKRQLFREMLALGCQFISPSQHVADAFNSL--YGP--------GRCRIINNGIDMATEAILAE---------------- 231 (405)
T ss_pred HHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH--cCC--------CCEEEeCCCcCccccccccc----------------
Confidence 1122223334455789999999999988752 332 28999999999754322211
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEccC--ccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 385 PLLKEALQAEVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 385 ~~~~~~l~~~~gl~~~~~~~~i~~iGrl--~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
.... ..+ ++.++|+++|+. .+.||++.+++|++.+. ++++|+|+|.|++.. ..++.+
T Consensus 232 ---~~~~----~~~--~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~~v~~ 290 (405)
T PRK10125 232 ---LPPV----RET--QGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AGNVVN 290 (405)
T ss_pred ---cccc----ccC--CCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------ccceEE
Confidence 0000 011 245789999994 47899999999999874 589999999876321 123555
Q ss_pred Eecc-ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHH
Q 007212 463 VAKF-NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 463 ~~~~-~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~ 541 (612)
.+.. +...+..+|+.||++|+||.+|+||++++||||||+|||+|+.||++|++.++ +|+++ +++|++
T Consensus 291 ~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv----------~~~d~~ 359 (405)
T PRK10125 291 HGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTV----------SEEEVL 359 (405)
T ss_pred ecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEE----------CCCCHH
Confidence 4433 45667789999999999999999999999999999999999999999999875 89976 999999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 542 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 542 ~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
+|++.+...+.+.........+++...+.|||+.++++|+++|+++
T Consensus 360 ~La~~~~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 360 QLAQLSKPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred HHHhccCHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9998654322220000011223344578899999999999999864
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-33 Score=293.28 Aligned_cols=356 Identities=18% Similarity=0.194 Sum_probs=243.1
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+.++.| ...||.+.++.+|+++|+++||+|+|+++....... .....|++++
T Consensus 1 ~i~~i~~~~~~-~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~----------------------~~~~~~i~~~ 57 (363)
T cd04955 1 KIAIIGTRGIP-AKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK----------------------ETEYNGVRLI 57 (363)
T ss_pred CeEEEecCcCC-cccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc----------------------ccccCCceEE
Confidence 79999876555 358999999999999999999999999976321110 1123466666
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+..+.... ...+.......+.... . ++|. +|+|.+.....+.
T Consensus 58 ~~~~~~~~~----------------------~~~~~~~~~~~~~~~~-~-------------~~~~-~~i~~~~~~~~~~ 100 (363)
T cd04955 58 HIPAPEIGG----------------------LGTIIYDILAILHALF-V-------------KRDI-DHVHALGPAIAPF 100 (363)
T ss_pred EcCCCCccc----------------------hhhhHHHHHHHHHHHh-c-------------cCCe-EEEEecCccHHHH
Confidence 653221000 0001011111111111 1 1342 4444333322222
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchh-HHHHHHHhhCCEEEec
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLTV 324 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~l~~ad~vi~v 324 (612)
...... .+.|+++++|+..+... ..+. + ..... ...+..++.+|.++++
T Consensus 101 ~~~~~~------~~~~~v~~~h~~~~~~~---------~~~~--------------~-~~~~~~~~~~~~~~~ad~ii~~ 150 (363)
T cd04955 101 LPLLRL------KGKKVVVNMDGLEWKRA---------KWGR--------------P-AKRYLKFGEKLAVKFADRLIAD 150 (363)
T ss_pred HHHHHh------cCCCEEEEccCcceeec---------cccc--------------c-hhHHHHHHHHHHHhhccEEEeC
Confidence 211111 37899999997543210 0000 0 00111 2235567899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+... +|.. . .+||||+|...+.+. ....++.+++. ..
T Consensus 151 s~~~~~~~~~~--~~~~--------~-~~i~ngv~~~~~~~~----------------------~~~~~~~~~~~---~~ 194 (363)
T cd04955 151 SPGIKEYLKEK--YGRD--------S-TYIPYGADHVVSSEE----------------------DEILKKYGLEP---GR 194 (363)
T ss_pred CHHHHHHHHHh--cCCC--------C-eeeCCCcChhhcchh----------------------hhhHHhcCCCC---Cc
Confidence 99999998642 4432 3 899999998765431 12344455542 24
Q ss_pred EEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC--hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
.++|+||+.+.||++.+++|++++.+ +++|+++|+|+ ..+.+.+++. ....+++.+.+..+.++...++..||+++
T Consensus 195 ~i~~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~~~~~~~~~~~~-~~~~~~V~~~g~~~~~~~~~~~~~ad~~v 272 (363)
T cd04955 195 YYLLVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADHNTPYGKLLKEK-AAADPRIIFVGPIYDQELLELLRYAALFY 272 (363)
T ss_pred EEEEEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCCcchHHHHHHHH-hCCCCcEEEccccChHHHHHHHHhCCEEE
Confidence 68899999999999999999999854 89999999974 2344444432 22345788888888888888999999999
Q ss_pred EcCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007212 483 IPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 483 ~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 561 (612)
+||.. |+||++++|||+||+|||+|+.|+..|++.+ +|+++ ++.|. ++++|.+++++ ++.+.+
T Consensus 273 ~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~----------~~~~~--l~~~i~~l~~~--~~~~~~ 336 (363)
T cd04955 273 LHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYF----------KVGDD--LASLLEELEAD--PEEVSA 336 (363)
T ss_pred eCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEe----------cCchH--HHHHHHHHHhC--HHHHHH
Confidence 99999 9999999999999999999999999999976 67765 66665 99999999998 566666
Q ss_pred HHHHH---HHhhcCcHHHHHHHHHHHH
Q 007212 562 MMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 562 ~~~~~---~~~~fsw~~~a~~~~~~y~ 585 (612)
+++++ ..++|||+.++++|+++|+
T Consensus 337 ~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 337 MAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 76665 4577999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-33 Score=291.25 Aligned_cols=360 Identities=23% Similarity=0.266 Sum_probs=252.7
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..|+|. .||.+.++..|+++|+++||+|+++++.......... ..+.+.
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----------------------~~~~~~ 55 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-----------------------RVVPVP 55 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-----------------------Cceeec
Confidence 799999999886 6999999999999999999999999987432111100 000010
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc-chH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS-LIP 244 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~-~~~ 244 (612)
....+.+.. .... +. ........++.. +||+ +|+|..... ...
T Consensus 56 ~~~~~~~~~-------~~~~-------~~--------~~~~~~~~~~~~-------------~pdi-i~~~~~~~~~~~~ 99 (364)
T cd03814 56 SVPLPGYPE-------IRLA-------LP--------PRRRVRRLLDAF-------------APDV-VHIATPGPLGLAA 99 (364)
T ss_pred ccccCcccc-------eEec-------cc--------chhhHHHHHHhc-------------CCCE-EEEeccchhhHHH
Confidence 000000000 0000 00 001111222222 4896 777743322 222
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
..+... .++|+++++|+...+- . ... ... +.........+..++.+|.++++
T Consensus 100 ~~~~~~-------~~~~~i~~~~~~~~~~--~----~~~-~~~--------------~~~~~~~~~~~~~~~~~d~i~~~ 151 (364)
T cd03814 100 LRAARR-------LGIPVVTSYHTDFPEY--L----RYY-GLG--------------PLSWLAWAYLRWFHNRADRVLVP 151 (364)
T ss_pred HHHHHH-------cCCCEEEEEecChHHH--h----hhc-ccc--------------hHhHhhHHHHHHHHHhCCEEEeC
Confidence 222222 4889999999643210 0 000 000 00001123456678899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+...+.+.. .+.. ++.+++||+|...+.|... +...+.+++ + .+.+
T Consensus 152 s~~~~~~~~~---~~~~--------~~~~~~~g~~~~~~~~~~~-------------------~~~~~~~~~-~--~~~~ 198 (364)
T cd03814 152 SPSLADELRA---RGFR--------RVRLWPRGVDTELFHPRRR-------------------DEALRARLG-P--PDRP 198 (364)
T ss_pred CHHHHHHHhc---cCCC--------ceeecCCCccccccCcccc-------------------cHHHHHHhC-C--CCCe
Confidence 9999996664 3322 7899999999988876532 222334444 2 2457
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
+|+|+|++.+.||++.++++++++.+ ++++|+|+|.++ ....++ ....++.+.+..+.+++..+++.||++++
T Consensus 199 ~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~--~~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ 272 (364)
T cd03814 199 VLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGP--ARARLE----ARYPNVHFLGFLDGEELAAAYASADVFVF 272 (364)
T ss_pred EEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCc--hHHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEE
Confidence 99999999999999999999999976 589999999987 333333 33456888888788888899999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHH
Q 007212 484 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 563 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~ 563 (612)
||..|++|++++|||+||+|||+++.++..|++.++.+|+++ ++.|.++++++|.+++++ ++.+.+++
T Consensus 273 ~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~ 340 (364)
T cd03814 273 PSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLV----------EPGDAEAFAAALAALLAD--PELRRRMA 340 (364)
T ss_pred CcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEc----------CCCCHHHHHHHHHHHHcC--HHHHHHHH
Confidence 999999999999999999999999999999999998999976 999999999999999998 67777777
Q ss_pred HHHH--HhhcCcHHHHHHHHHHHH
Q 007212 564 KNGM--AQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 564 ~~~~--~~~fsw~~~a~~~~~~y~ 585 (612)
+++. .++|+|+.++++++++|+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 341 ARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhhC
Confidence 7773 368999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=290.75 Aligned_cols=352 Identities=18% Similarity=0.218 Sum_probs=248.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++.. +. .||.+.++..++++|.++||+|++++....
T Consensus 1 MkIl~~~~~--~~--~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--DI--SGGAARAAYRLHRALQAAGVDSTMLVQEKK----------------------------------- 41 (365)
T ss_pred CeEEEEecC--CC--CCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence 899999864 32 699999999999999999999999997611
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
.+.. .++. .+||+ ||+|.+....+.
T Consensus 42 ------~~~~-----------------------------------~~~~-------------~~~di-ih~~~~~~~~~~ 66 (365)
T cd03825 42 ------ALIS-----------------------------------KIEI-------------INADI-VHLHWIHGGFLS 66 (365)
T ss_pred ------hhhh-----------------------------------Chhc-------------ccCCE-EEEEccccCccC
Confidence 0000 0111 14795 899987766655
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccc--cCcccccccCCCcccccccccccCCCC-CcCCchhHHHHHHH-hhCCE
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGR--FAFEDFGLLNLPAQFKSSFDFIDGYNK-PVRGRKINWMKAGI-LESDM 320 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~k~~l-~~ad~ 320 (612)
......+. .++|+|+++|+..+... ......... ..... ...+...+.. ......+.+.+..+ ..++.
T Consensus 67 ~~~~~~~~-----~~~~~v~~~hd~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (365)
T cd03825 67 IEDLSKLL-----DRKPVVWTLHDMWPFTGGCHYPGGCDRY--KTECG-NCPQLGSYPEKDLSRWIWRRKRKAWADLNLT 138 (365)
T ss_pred HHHHHHHH-----cCCCEEEEcccCcccccccCCccccccc--cccCC-CCCCCCCCCcccHHHHHHHHHHHHhccCCcE
Confidence 44433321 38899999997643210 000000000 00000 0000000000 00001112222222 45788
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 400 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 400 (612)
++++|+...+.+.+. +.++ ..++.+||||+|.+.|.|.. +...++.++++.+
T Consensus 139 ~v~~s~~~~~~~~~~--~~~~------~~~~~vi~ngi~~~~~~~~~--------------------~~~~~~~~~~~~~ 190 (365)
T cd03825 139 IVAPSRWLADCARSS--SLFK------GIPIEVIPNGIDTTIFRPRD--------------------KREARKRLGLPAD 190 (365)
T ss_pred EEehhHHHHHHHHhc--cccC------CCceEEeCCCCcccccCCCc--------------------HHHHHHHhCCCCC
Confidence 999999999888752 1122 23899999999998886643 4456777787754
Q ss_pred CCCcEEEEEccCcc--ccCHHHHHHHHHhccc---CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccC-hHHHHHH
Q 007212 401 RNIPVIGFIGRLEE--QKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-IPLAHMI 474 (612)
Q Consensus 401 ~~~~~i~~iGrl~~--~Kg~d~li~A~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~-~~~~~~i 474 (612)
.+++++.|+... .||++.+++|++.+.+ ++++++++|.++..... ....++.+.+..+ .+.+..+
T Consensus 191 --~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~ 261 (365)
T cd03825 191 --KKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDESLALI 261 (365)
T ss_pred --CeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHHHHHHH
Confidence 367777777655 8999999999999875 68999999998743221 2344577888877 7778889
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007212 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 475 ~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
++.||++++||..|++|++++|||++|+|||+++.||+.|++.++.+|+++ ++.|++++++++.+++++
T Consensus 262 ~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~l~~l~~~- 330 (365)
T cd03825 262 YSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLA----------KPGDPEDLAEGIEWLLAD- 330 (365)
T ss_pred HHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEe----------CCCCHHHHHHHHHHHHhC-
Confidence 999999999999999999999999999999999999999999998899976 889999999999999987
Q ss_pred CHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHH
Q 007212 555 GTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 555 ~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l 587 (612)
++.+.++++++ ..++|||+.++++|+++|+++
T Consensus 331 -~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 331 -PDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred -HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 55566666655 568899999999999999864
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=290.81 Aligned_cols=338 Identities=22% Similarity=0.254 Sum_probs=240.6
Q ss_pred ccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEEEEeCccccccccC
Q 007212 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG 178 (612)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~g 178 (612)
..||.+.++.+|+++|+++||+|.++++.... .+. ....|++++.+.... .
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~----------------------~~~~~~~~~~~~~~~--~---- 58 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRL-VAE----------------------LEAEGSRHIKLPFIS--K---- 58 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCch-HHH----------------------HHhcCCeEEEccccc--c----
Confidence 35999999999999999999999999875211 110 011233333321100 0
Q ss_pred CCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHHHHHhhhcCCCCcC
Q 007212 179 KTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYK 258 (612)
Q Consensus 179 ~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~ 258 (612)
. ..............++.. +||+ ||+|.+.......+.... .
T Consensus 59 ----~-------------~~~~~~~~~~l~~~~~~~-------------~~di-i~~~~~~~~~~~~~~~~~-------~ 100 (355)
T cd03819 59 ----N-------------PLRILLNVARLRRLIREE-------------KVDI-VHARSRAPAWSAYLAARR-------T 100 (355)
T ss_pred ----c-------------hhhhHHHHHHHHHHHHHc-------------CCCE-EEECCCchhHHHHHHHHh-------c
Confidence 0 001111112233333332 5895 899876665555444433 4
Q ss_pred CceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCC
Q 007212 259 SAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK 338 (612)
Q Consensus 259 ~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~ 338 (612)
++|+++++|+..... .+.+..+..+|.++++|+...+.+.+ .+
T Consensus 101 ~~~~i~~~h~~~~~~-----------------------------------~~~~~~~~~~~~vi~~s~~~~~~~~~--~~ 143 (355)
T cd03819 101 RPPFVTTVHGFYSVN-----------------------------------FRYNAIMARGDRVIAVSNFIADHIRE--NY 143 (355)
T ss_pred CCCEEEEeCCchhhH-----------------------------------HHHHHHHHhcCEEEEeCHHHHHHHHH--hc
Confidence 899999999643210 03445677899999999999999884 25
Q ss_pred CccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCH
Q 007212 339 GVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 418 (612)
Q Consensus 339 G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~ 418 (612)
|++.+ ++.+||||+|...|.+.... ......++++++++. +.++|+|+||+.+.||+
T Consensus 144 ~~~~~------k~~~i~ngi~~~~~~~~~~~---------------~~~~~~~~~~~~~~~--~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 144 GVDPD------RIRVIPRGVDLDRFDPGAVP---------------PERILALAREWPLPK--GKPVILLPGRLTRWKGQ 200 (355)
T ss_pred CCChh------hEEEecCCccccccCccccc---------------hHHHHHHHHHcCCCC--CceEEEEeeccccccCH
Confidence 65544 89999999999888654321 111223667777654 44899999999999999
Q ss_pred HHHHHHHHhccc--CCeEEEEEecCCh--hHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccEEEEcC-CCCCCc
Q 007212 419 DILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPS-RFEPCG 491 (612)
Q Consensus 419 d~li~A~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~v~pS-~~E~~g 491 (612)
+.+++++..+.+ ++++|+|+|.++. .+.+.+.+...+++ +++.+.+. .+++..+++.||++++|| ..|++|
T Consensus 201 ~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~ 278 (355)
T cd03819 201 EVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFG 278 (355)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCc
Confidence 999999999977 6899999999863 34455555555443 45776666 445668999999999999 789999
Q ss_pred HHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HH
Q 007212 492 LIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MA 568 (612)
Q Consensus 492 l~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~ 568 (612)
++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|..++... ++.+.++++++ +.
T Consensus 279 ~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 279 RTAVEAQAMGRPVIASDHGGARETVRPGETGLLV----------PPGDAEALAQALDQILSLL-PEGRAKMFAKARMCVE 347 (355)
T ss_pred hHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEe----------CCCCHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999986 9999999999997666531 45556666655 67
Q ss_pred hhcCcHHH
Q 007212 569 QDLSWKGP 576 (612)
Q Consensus 569 ~~fsw~~~ 576 (612)
++|||+.+
T Consensus 348 ~~f~~~~~ 355 (355)
T cd03819 348 TLFSYDRM 355 (355)
T ss_pred HhhhhccC
Confidence 99999853
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=297.05 Aligned_cols=220 Identities=17% Similarity=0.207 Sum_probs=177.2
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcC-CCcccccccccCcchhhhccHHHHHHHHH
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWN-PLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (612)
+..+|.++++|+..++.+.. +|++.+ ++.+||||+|.+.+. |..
T Consensus 131 ~~~~d~~i~~S~~~~~~~~~---~~~~~~------ki~vi~N~id~~~~~~~~~-------------------------- 175 (359)
T PRK09922 131 ITCADYHLAISSGIKEQMMA---RGISAQ------RISVIYNPVEIKTIIIPPP-------------------------- 175 (359)
T ss_pred hhcCCEEEEcCHHHHHHHHH---cCCCHH------HEEEEcCCCCHHHccCCCc--------------------------
Confidence 46899999999999999986 566544 899999999965442 211
Q ss_pred HhCCCCCCCCcEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccCh-
Q 007212 394 EVGLPVDRNIPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNI- 468 (612)
Q Consensus 394 ~~gl~~~~~~~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~- 468 (612)
...+.++|+|+||+. ++||++.+++|+.++. ++++|+|+|+|+ ..+.++++..++ ++++.+.+..+.
T Consensus 176 -----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~-~~~~l~ivG~g~--~~~~l~~~~~~~~l~~~v~f~G~~~~~ 247 (359)
T PRK09922 176 -----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT-GEWQLHIIGDGS--DFEKCKAYSRELGIEQRIIWHGWQSQP 247 (359)
T ss_pred -----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC-CCeEEEEEeCCc--cHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 112357899999996 5699999999999884 489999999997 455667776654 356877776533
Q ss_pred -HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC-CCCcccceecCcceEEecccccccccCCCCCHHHHHHH
Q 007212 469 -PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 469 -~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~ 546 (612)
+.+..+|+.||++++||.+|+||++++|||+||+|||+++ .||..|+|.++.+|+++ +++|+++++++
T Consensus 248 ~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv----------~~~d~~~la~~ 317 (359)
T PRK09922 248 WEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELY----------TPGNIDEFVGK 317 (359)
T ss_pred HHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEE----------CCCCHHHHHHH
Confidence 6677889999999999999999999999999999999999 89999999999999976 99999999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 547 VRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 547 i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
|.++++++.......+.+ ...+|+-+...+++.++|..++.
T Consensus 318 i~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 318 LNKVISGEVKYQHDAIPN--SIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred HHHHHhCcccCCHHHHHH--HHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999843111222222 35678889999999999988763
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=292.85 Aligned_cols=272 Identities=21% Similarity=0.286 Sum_probs=213.5
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+ ||+|....+.....+.+. .++|++++.|+.......... .... +...
T Consensus 82 ~~dv-vh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~~~~------~~~~---------------~~~~ 132 (367)
T cd05844 82 RPDL-VHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSLALL------LRSR---------------WALY 132 (367)
T ss_pred CCCE-EEeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccchhh------cccc---------------hhHH
Confidence 4895 899966555555544443 489999999964321100000 0000 0012
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHH
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
....+..++.+|.++++|+..++.+.+ .|.+.+ ++.+++||+|.+.+.|...
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~---~~~~~~------~i~vi~~g~d~~~~~~~~~------------------- 184 (367)
T cd05844 133 ARRRRRLARRAALFIAVSQFIRDRLLA---LGFPPE------KVHVHPIGVDTAKFTPATP------------------- 184 (367)
T ss_pred HHHHHHHHHhcCEEEECCHHHHHHHHH---cCCCHH------HeEEecCCCCHHhcCCCCC-------------------
Confidence 234466778999999999999999986 465544 8999999999887765421
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHH--CCCceEEE
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGV 463 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~ 463 (612)
..+.++++|+|++.+.||++.+++|++.+.+ ++++|+|+|.|+ ..+.++++..+ ..+++.+.
T Consensus 185 ------------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ------------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP--LLAALEALARALGLGGRVTFL 250 (367)
T ss_pred ------------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch--HHHHHHHHHHHcCCCCeEEEC
Confidence 1244789999999999999999999999865 689999999987 55667777766 34678888
Q ss_pred eccChHHHHHHHHhccEEEEcCC------CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCC
Q 007212 464 AKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~ 537 (612)
+..+.+++..+++.||++++||. .|+||++++|||+||+|||+++.++..|++.++.+|+++ ++
T Consensus 251 g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~----------~~ 320 (367)
T cd05844 251 GAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLV----------PE 320 (367)
T ss_pred CCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEE----------CC
Confidence 88888888899999999999997 499999999999999999999999999999999999986 89
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHH
Q 007212 538 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 538 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~ 582 (612)
.|+++++++|.+++++ ++.+.+++.++ +.++|||+..++++++
T Consensus 321 ~d~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLAD--PDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999998 66666666665 4689999999999876
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=288.39 Aligned_cols=353 Identities=19% Similarity=0.242 Sum_probs=249.7
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+++++.+ ..||.+.++.+|+++|.++||+|++++...+....... .+....
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----------------------~~~~~~ 53 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPI-----------------------DATIIL 53 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchh-----------------------hccceE
Confidence 588888663 36999999999999999999999999865221111000 000000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+... . ....+........++++.. +||+ +|+|.+++.++..
T Consensus 54 ~~~~~---~---------------------~~~~~~~~~~~~~~~~~~~-------------~pdi-v~~~~~~~~~~~~ 95 (360)
T cd04951 54 NLNMS---K---------------------NPLSFLLALWKLRKILRQF-------------KPDV-VHAHMFHANIFAR 95 (360)
T ss_pred Eeccc---c---------------------cchhhHHHHHHHHHHHHhc-------------CCCE-EEEcccchHHHHH
Confidence 11000 0 0001111112233344433 4895 8999887766666
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
+++... .+.|++++.|+....+. ......+.....++.++++|
T Consensus 96 l~~~~~------~~~~~v~~~h~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~s 138 (360)
T cd04951 96 LLRLFL------PSPPLICTAHSKNEGGR-------------------------------LRMLAYRLTDFLSDLTTNVS 138 (360)
T ss_pred HHHhhC------CCCcEEEEeeccCchhH-------------------------------HHHHHHHHHhhccCceEEEc
Confidence 655542 57899999996543110 01112233445688899999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+. .+.+. .++.+||||+|...|.+... .+..++++++++. +.++
T Consensus 139 ~~~~~~~~~~--~~~~~------~~~~~i~ng~~~~~~~~~~~------------------~~~~~~~~~~~~~--~~~~ 190 (360)
T cd04951 139 KEALDYFIAS--KAFNA------NKSFVVYNGIDTDRFRKDPA------------------RRLKIRNALGVKN--DTFV 190 (360)
T ss_pred HHHHHHHHhc--cCCCc------ccEEEEccccchhhcCcchH------------------HHHHHHHHcCcCC--CCEE
Confidence 9999988752 22232 38999999999887765421 2455778888864 4489
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
++|+||+.+.||++.+++|+.++.+ ++++|+|+|+|+ ..+.+++...+++ +++.+.+.. +++..+++.||++
T Consensus 191 ~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~ 266 (360)
T cd04951 191 ILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--LRATLERLIKALGLSNRVKLLGLR--DDIAAYYNAADLF 266 (360)
T ss_pred EEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--cHHHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhhceE
Confidence 9999999999999999999999865 589999999988 4455555555443 457776643 3456799999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 561 (612)
++||..|++|++++|||++|+|||+++.|+..|++.+ +|+.+ +++|+++++++|.+++++. +.....
T Consensus 267 v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~----------~~~~~~~~~~~i~~ll~~~-~~~~~~ 333 (360)
T cd04951 267 VLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIV----------PISDPEALANKIDEILKMS-GEERDI 333 (360)
T ss_pred EecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEe----------CCCCHHHHHHHHHHHHhCC-HHHHHH
Confidence 9999999999999999999999999999999999987 67765 8899999999999999652 333333
Q ss_pred HHH--HHHHhhcCcHHHHHHHHHHHH
Q 007212 562 MMK--NGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 562 ~~~--~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+.. +.+.+.|||+.++++|+++|.
T Consensus 334 ~~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 334 IGARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 333 346799999999999999996
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=287.58 Aligned_cols=357 Identities=19% Similarity=0.207 Sum_probs=256.0
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|...+.+ ||.+.++..|+++|.+.||+|.+++......... .....|++++
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~---------------------~~~~~~i~v~ 55 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTDRGELGE---------------------ELEEAGVPVY 55 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCcchhhhH---------------------HHHhcCCeEE
Confidence 79999988644 9999999999999999999999998652211000 0001255555
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+..+.... .........+.++.. +||+ +|+|.++......
T Consensus 56 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~-------------~~di-v~~~~~~~~~~~~ 96 (365)
T cd03807 56 CLGKRPGRP-------------------------DPGALLRLYKLIRRL-------------RPDV-VHTWMYHADLYGG 96 (365)
T ss_pred EEecccccc-------------------------cHHHHHHHHHHHHhh-------------CCCE-EEeccccccHHHH
Confidence 543221100 001112233334332 4895 8888777666555
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
...... .+.|++++.|+...... + .. ........+.....+|.++++|
T Consensus 97 ~~~~~~------~~~~~i~~~~~~~~~~~---------~---~~--------------~~~~~~~~~~~~~~~~~~i~~s 144 (365)
T cd03807 97 LAARLA------GVPPVIWGIRHSDLDLG---------K---KS--------------TRLVARLRRLLSSFIPLIVANS 144 (365)
T ss_pred HHHHhc------CCCcEEEEecCCccccc---------c---hh--------------HhHHHHHHHHhccccCeEEecc
Confidence 554432 37899999997554210 0 00 0011223344566789999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+ +|.+.+ ++.+++||+|...+.+.... +..++++++++. +.++
T Consensus 145 ~~~~~~~~~---~~~~~~------~~~vi~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~--~~~~ 195 (365)
T cd03807 145 AAAAEYHQA---IGYPPK------KIVVIPNGVDTERFSPDLDA------------------RARLREELGLPE--DTFL 195 (365)
T ss_pred HHHHHHHHH---cCCChh------heeEeCCCcCHHhcCCcccc------------------hHHHHHhcCCCC--CCeE
Confidence 999999886 455444 89999999998877665321 445567788864 4489
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHH-H--CCCceEEEeccChHHHHHHHHhccE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-L--YPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~-~--~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
|+|+||+.+.||++.+++|+..+.+ ++++|+++|.+.. ...++.... . ..+++.+.+. .+++..+++.||+
T Consensus 196 i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi 271 (365)
T cd03807 196 IGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPD--RANLELLALKELGLEDKVILLGE--RSDVPALLNALDV 271 (365)
T ss_pred EEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcc--hhHHHHHHHHhcCCCceEEEccc--cccHHHHHHhCCE
Confidence 9999999999999999999999865 6899999999873 222333322 2 3345655553 3446689999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 560 (612)
+++||..|++|++++|||+||+|||+++.|+..|++.+ +|+++ ++.|+++++++|.+++++ ++.+.
T Consensus 272 ~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~ 337 (365)
T cd03807 272 FVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLV----------PPGDPEALAEAIEALLAD--PALRQ 337 (365)
T ss_pred EEeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEe----------CCCCHHHHHHHHHHHHhC--hHHHH
Confidence 99999999999999999999999999999999999988 78876 889999999999999998 56666
Q ss_pred HHHHHH---HHhhcCcHHHHHHHHHHHH
Q 007212 561 EMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 561 ~~~~~~---~~~~fsw~~~a~~~~~~y~ 585 (612)
++++++ +.++|||+..+++|+++|+
T Consensus 338 ~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 338 ALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 666665 5688999999999999884
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=287.59 Aligned_cols=349 Identities=20% Similarity=0.253 Sum_probs=244.3
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
|||+|+.+|+|. .||.+.++.+|+++|.++||+|++++......... ....+++++
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~----------------------~~~~~~~~~ 56 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRD----------------------EERNGHRVI 56 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchh----------------------hhccCceEE
Confidence 799999999996 89999999999999999999999999763321110 011122222
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+.... . .+. ...... + ...++... .+||+ +|+|.........
T Consensus 57 ~~~~~~--~---------~~~-------~~~~~~--~-----~~~~~~~~-----------~~~Di-i~~~~~~~~~~~~ 99 (357)
T cd03795 57 RAPSLL--N---------VAS-------TPFSPS--F-----FKQLKKLA-----------KKADV-IHLHFPNPLADLA 99 (357)
T ss_pred Eeeccc--c---------ccc-------ccccHH--H-----HHHHHhcC-----------CCCCE-EEEecCcchHHHH
Confidence 221110 0 000 000000 0 01111111 25895 8887533222211
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
..... .+.|++++.|+....... . ......+++..++.+|.++++|
T Consensus 100 ~~~~~-------~~~~~i~~~h~~~~~~~~-------------~--------------~~~~~~~~~~~~~~~d~vi~~s 145 (357)
T cd03795 100 LLLLP-------RKKPVVVHWHSDIVKQKL-------------L--------------LKLYRPLQRRFLRRADAIVATS 145 (357)
T ss_pred HHHhc-------cCceEEEEEcChhhccch-------------h--------------hhhhhHHHHHHHHhcCEEEeCc
Confidence 11111 378999999953221100 0 0011234566789999999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+.+.+.+.....+. .++.+||||+|...+.+.... .. .....+ .+.++
T Consensus 146 ~~~~~~~~~~~~~~---------~~~~~i~~gi~~~~~~~~~~~------------------~~---~~~~~~--~~~~~ 193 (357)
T cd03795 146 PNYAETSPVLRRFR---------DKVRVIPLGLDPARYPRPDAL------------------EE---AIWRRA--AGRPF 193 (357)
T ss_pred HHHHHHHHHhcCCc---------cceEEecCCCChhhcCCcchh------------------hh---HhhcCC--CCCcE
Confidence 99999776421111 289999999999887654310 00 112222 24589
Q ss_pred EEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccEEEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
|+|+||+.+.||++.+++|++++. +++|+|+|+|+ ....++++..+. ..++.+.+..+.+++..+++.||++++
T Consensus 194 i~~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~--~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ 269 (357)
T cd03795 194 FLFVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGP--LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVF 269 (357)
T ss_pred EEEecccccccCHHHHHHHHHhcc--CcEEEEEeCCh--hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEe
Confidence 999999999999999999999995 89999999987 555666666433 357888888888888899999999999
Q ss_pred cCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec-CcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007212 484 PSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 484 pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 560 (612)
||. .|++|++++|||++|+|||+++.++..+.+.+ +.+|+++ ++.|+++++++|.+++++ ++.++
T Consensus 270 ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~----------~~~d~~~~~~~i~~l~~~--~~~~~ 337 (357)
T cd03795 270 PSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVV----------PPGDPAALAEAIRRLLED--PELRE 337 (357)
T ss_pred CCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEe----------CCCCHHHHHHHHHHHHHC--HHHHH
Confidence 996 49999999999999999999999999998886 8899976 899999999999999998 66667
Q ss_pred HHHHHH---HHhhcCcHHHH
Q 007212 561 EMMKNG---MAQDLSWKGPA 577 (612)
Q Consensus 561 ~~~~~~---~~~~fsw~~~a 577 (612)
+|++++ +.+.|||+.++
T Consensus 338 ~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 338 RLGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHHhcchHhhC
Confidence 777666 57899999764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=286.12 Aligned_cols=383 Identities=20% Similarity=0.210 Sum_probs=259.6
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..++|. .||.+.++..++++|+++||+|+++++............ .......|++++
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 63 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG---------------YKREEVDGVRVH 63 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc---------------ceEEecCCeEEE
Confidence 799999998886 599999999999999999999999997633221110000 111233466666
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCC-cccchH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDW-HTSLIP 244 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~-~~~~~~ 244 (612)
.+........ .+......+..+.......+.... .+||+ +|+|.+ .....+
T Consensus 64 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~D~-v~~~~~~~~~~~~ 115 (394)
T cd03794 64 RVPLPPYKKN----------------GLLKRLLNYLSFALSALLALLKRR-----------RRPDV-IIATSPPLLIALA 115 (394)
T ss_pred EEecCCCCcc----------------chHHHHHhhhHHHHHHHHHHHhcc-----------cCCCE-EEEcCChHHHHHH
Confidence 5543221110 011111222222222333222111 25896 777752 222222
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
....... .++|+++++|+..+....... ..... .........+++..++.+|.++++
T Consensus 116 ~~~~~~~------~~~~~i~~~h~~~~~~~~~~~-----~~~~~------------~~~~~~~~~~~~~~~~~~d~vi~~ 172 (394)
T cd03794 116 ALLLARL------KGAPFVLEVRDLWPESAVALG-----LLKNG------------SLLYRLLRKLERLIYRRADAIVVI 172 (394)
T ss_pred HHHHHHh------cCCCEEEEehhhcchhHHHcc-----Ccccc------------chHHHHHHHHHHHHHhcCCEEEEE
Confidence 2222221 488999999976432111000 00000 000001223456778899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+.. .+... .++.+||||+|...+.+.... .. +.+.... .+.+
T Consensus 173 s~~~~~~~~~---~~~~~------~~~~~i~~~~~~~~~~~~~~~-------------------~~-~~~~~~~--~~~~ 221 (394)
T cd03794 173 SPGMREYLVR---RGVPP------EKISVIPNGVDLELFKPPPAD-------------------ES-LRKELGL--DDKF 221 (394)
T ss_pred CHHHHHHHHh---cCCCc------CceEEcCCCCCHHHcCCccch-------------------hh-hhhccCC--CCcE
Confidence 9999999873 34332 389999999998877655321 11 2222222 3558
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHH-CCCceEEEeccChHHHHHHHHhccEEE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEIL-YPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~-~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
+|+|+|++.++||++.+++++.++.+ ++++|+|+|.|+ ..+.++++... ...++.+.+..+.+++..+++.||+++
T Consensus 222 ~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i 299 (394)
T cd03794 222 VVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGP--EKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGL 299 (394)
T ss_pred EEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcc--cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeE
Confidence 99999999999999999999999976 489999999987 34444444332 224688888778888889999999999
Q ss_pred EcCCCCCC-----cHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHH
Q 007212 483 IPSRFEPC-----GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 557 (612)
Q Consensus 483 ~pS~~E~~-----gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 557 (612)
+|+..|++ |++++|||++|+|||+++.++..+++.++.+|+++ ++.|+++++++|.+++++ ++
T Consensus 300 ~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~ 367 (394)
T cd03794 300 VPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVV----------PPGDPEALAAAILELLDD--PE 367 (394)
T ss_pred EeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEe----------CCCCHHHHHHHHHHHHhC--hH
Confidence 99998865 88899999999999999999999999998899976 889999999999999987 66
Q ss_pred HHHHHHHHH---HHhhcCcHHHHHHHH
Q 007212 558 ALAEMMKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 558 ~~~~~~~~~---~~~~fsw~~~a~~~~ 581 (612)
.+.++++++ ..++|||+.++++|+
T Consensus 368 ~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 368 ERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 677777666 467999999999873
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=280.51 Aligned_cols=368 Identities=20% Similarity=0.261 Sum_probs=265.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
++|+.|+.+|+|. .||++..++.|++.|-+.||.|.++|-.|++... + +...+|.++
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~r~g------------------i---rylt~glkV 57 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVG------------------I---RYLTNGLKV 57 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccCccc------------------e---eeecCCceE
Confidence 5899999999997 9999999999999999999999999998874322 2 234467888
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
|+++....+.. .|-..+|+. +.++- ..+.. ++.. |+|.|.-.+.+.-
T Consensus 58 yylp~~v~~n~---tT~ptv~~~------------~Pllr----~i~lr-------------E~I~-ivhghs~fS~lah 104 (426)
T KOG1111|consen 58 YYLPAVVGYNQ---TTFPTVFSD------------FPLLR----PILLR-------------ERIE-IVHGHSPFSYLAH 104 (426)
T ss_pred EEEeeeeeecc---cchhhhhcc------------Ccccc----hhhhh-------------hceE-EEecCChHHHHHH
Confidence 88865543321 111112211 11110 01111 1235 5888865444443
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
-.+.... ..|.++|||-|.+ |.+.++.....+ ..+...+...|++||+
T Consensus 105 e~l~har-----tMGlktVfTdHSl-----fGfad~~si~~n----------------------~ll~~sL~~id~~IcV 152 (426)
T KOG1111|consen 105 EALMHAR-----TMGLKTVFTDHSL-----FGFADIGSILTN----------------------KLLPLSLANIDRIICV 152 (426)
T ss_pred HHHHHHH-----hcCceEEEecccc-----ccccchhhhhhc----------------------ceeeeeecCCCcEEEE
Confidence 3332221 1478999999953 333333222111 1234457789999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|..-++...=. -. +...++.+|||.++...|.|.... - .+.+..
T Consensus 153 shtskentvlr--~~------L~p~kvsvIPnAv~~~~f~P~~~~---------------------------~-~S~~i~ 196 (426)
T KOG1111|consen 153 SHTSKENTVLR--GA------LAPAKVSVIPNAVVTHTFTPDAAD---------------------------K-PSADII 196 (426)
T ss_pred eecCCCceEEE--ec------cCHhHeeeccceeeccccccCccc---------------------------c-CCCCee
Confidence 98776654421 12 223499999999999999995321 1 123457
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCCh--hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
.|+.++||..+||+|.|+++++++.+ ++++|+|+|+|++ .+++.++++..+ +++.+.+..+.+...+.+...|+
T Consensus 197 ~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~--~rV~~lG~v~h~~Vr~vl~~G~I 274 (426)
T KOG1111|consen 197 TIVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQ--DRVVMLGTVPHDRVRDVLVRGDI 274 (426)
T ss_pred EEEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhcc--CceEEecccchHHHHHHHhcCcE
Confidence 89999999999999999999999987 8999999999994 566666666544 56999999999999999999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 560 (612)
|++||..|+||++++|||+||+|||+++.||++|++.++ +++ ....++++++++++.++...... -
T Consensus 275 FlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d---~i~---------~~~~~~~dl~~~v~~ai~~~~~~--p 340 (426)
T KOG1111|consen 275 FLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED---MIT---------LGEPGPDDLVGAVEKAITKLRTL--P 340 (426)
T ss_pred EeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc---cee---------ccCCChHHHHHHHHHHHHHhccC--c
Confidence 999999999999999999999999999999999999875 221 26778999999999998863221 1
Q ss_pred HHHHHHHHhhcCcHHHHHHHHHHHHHHHHcCC
Q 007212 561 EMMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 592 (612)
Q Consensus 561 ~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~~~ 592 (612)
.-..+...+.|+|+..+++.+++|.++.....
T Consensus 341 ~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~~ 372 (426)
T KOG1111|consen 341 LEFHDRVKKMYSWKDVAERTEKVYDRAATTSI 372 (426)
T ss_pred hhHHHHHHHhccHHHHHHHHHHHHHHHhhccC
Confidence 11123356789999999999999999987653
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=286.09 Aligned_cols=367 Identities=22% Similarity=0.255 Sum_probs=248.7
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..++|. .||.+.++.+|+++|+++||+|+++++............ ++...
T Consensus 1 kIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 56 (375)
T cd03821 1 KILHVIPSFDPK--YGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALN----------------------GVPVK 56 (375)
T ss_pred CeEEEcCCCCcc--cCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhcc----------------------Cceee
Confidence 799999998775 899999999999999999999999997643222110000 00000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCC-CcccchH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAND-WHTSLIP 244 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~-~~~~~~~ 244 (612)
.... .... .. ....+ .+............ .+||+ +|+|+ |......
T Consensus 57 ~~~~--~~~~--------~~----------~~~~~-~~~~~~~~~~~~~~-----------~~~di-i~~~~~~~~~~~~ 103 (375)
T cd03821 57 LFSI--NVAY--------GL----------NLARY-LFPPSLLAWLRLNI-----------READI-VHVHGLWSYPSLA 103 (375)
T ss_pred eccc--chhh--------hh----------hhhhh-ccChhHHHHHHHhC-----------CCCCE-EEEecccchHHHH
Confidence 0000 0000 00 00000 00001111111111 24795 88886 4433222
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
....... .+.|++++.|+.......... .+... .......+..+..++.+++.
T Consensus 104 ~~~~~~~------~~~~~i~~~~~~~~~~~~~~~-----~~~~~----------------~~~~~~~~~~~~~~~~i~~~ 156 (375)
T cd03821 104 AARAARK------YGIPYVVSPHGMLDPWALPHK-----ALKKR----------------LAWFLFERRLLQAAAAVHAT 156 (375)
T ss_pred HHHHHHH------hCCCEEEEccccccccccccc-----hhhhH----------------HHHHHHHHHHHhcCCEEEEC
Confidence 2221111 488999999965431110000 00000 00112345567789999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|......+... + ...++.+||||+|.+.+.+... .. .++..+.+. +.+
T Consensus 157 s~~~~~~~~~~---~-------~~~~~~vi~~~~~~~~~~~~~~-------------------~~-~~~~~~~~~--~~~ 204 (375)
T cd03821 157 SEQEAAEIRRL---G-------LKAPIAVIPNGVDIPPFAALPS-------------------RG-RRRKFPILP--DKR 204 (375)
T ss_pred CHHHHHHHHhh---C-------CcccEEEcCCCcChhccCcchh-------------------hh-hhhhccCCC--CCc
Confidence 98877776641 1 1238999999999988866431 11 145555543 458
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
+|+|+||+.+.||++.+++|+..+.+ ++++|+++|.++......++.+..++ .+++.+.+..+.++...+++.||+
T Consensus 205 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv 284 (375)
T cd03821 205 IILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADL 284 (375)
T ss_pred EEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCE
Confidence 99999999999999999999999976 69999999998766666666653433 356888888888888899999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 560 (612)
+++||..|+||++++|||+||+|||+++.+|..+++.+ .+|+++ +.+.++++++|.+++++ ++.+.
T Consensus 285 ~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~i~~l~~~--~~~~~ 350 (375)
T cd03821 285 FVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV-----------DDDVDALAAALRRALEL--PQRLK 350 (375)
T ss_pred EEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe-----------CCChHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999999999999999999999998 788864 45669999999999998 45666
Q ss_pred HHHHHH---HHhhcCcHHHHHHHHH
Q 007212 561 EMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 561 ~~~~~~---~~~~fsw~~~a~~~~~ 582 (612)
++++++ +.++|||+.++++|++
T Consensus 351 ~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 351 AMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 666655 5899999999999863
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-32 Score=282.71 Aligned_cols=357 Identities=19% Similarity=0.216 Sum_probs=245.7
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+++++.++| ...||.+.++..|+++|+++||+|+++++............ +....
T Consensus 1 kIl~i~~~~~~-~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 57 (359)
T cd03823 1 RILVVNHLYPP-RSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVI----------------------GVVVY 57 (359)
T ss_pred CeeEEcccCCc-ccccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccc----------------------cceee
Confidence 79999999888 45699999999999999999999999998744322211000 00000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
......... ..... ..+.........+.....+.++.. +||+ +|+|.+.......
T Consensus 58 ~~~~~~~~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-------------~~di-i~~~~~~~~~~~~ 112 (359)
T cd03823 58 GRPIDEVLR-------SALPR----DLFHLSDYDNPAVVAEFARLLEDF-------------RPDV-VHFHHLQGLGVSI 112 (359)
T ss_pred ccccccccC-------CCchh----hhhHHHhccCHHHHHHHHHHHHHc-------------CCCE-EEECCccchHHHH
Confidence 000000000 00000 000000000011222333333332 4895 8888763332222
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
...... .++|+++++|+....... ........|.++++|
T Consensus 113 ~~~~~~------~~~~~i~~~hd~~~~~~~-----------------------------------~~~~~~~~d~ii~~s 151 (359)
T cd03823 113 LRAARD------RGIPIVLTLHDYWLICPR-----------------------------------QGLFKKGGDAVIAPS 151 (359)
T ss_pred HHHHHh------cCCCEEEEEeeeeeecch-----------------------------------hhhhccCCCEEEEeC
Confidence 211111 378999999964321100 000112239999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+ .+... .++.+|+||+|...+.+... +.+ .+.++
T Consensus 152 ~~~~~~~~~---~~~~~------~~~~vi~n~~~~~~~~~~~~---------------------------~~~--~~~~~ 193 (359)
T cd03823 152 RFLLDRYVA---NGLFA------EKISVIRNGIDLDRAKRPRR---------------------------APP--GGRLR 193 (359)
T ss_pred HHHHHHHHH---cCCCc------cceEEecCCcChhhcccccc---------------------------CCC--CCceE
Confidence 999999886 34322 28999999999987755321 112 24579
Q ss_pred EEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcC
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPS 485 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS 485 (612)
|+|+|++.+.||++.++++++.+.+++++|+++|.+.......... ....++.+.+.++.+++..+++.||++++||
T Consensus 194 i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps 270 (359)
T cd03823 194 FGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPS 270 (359)
T ss_pred EEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcC
Confidence 9999999999999999999999976799999999987433322222 3345688888888888889999999999999
Q ss_pred C-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007212 486 R-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 564 (612)
Q Consensus 486 ~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 564 (612)
. .|++|++++|||+||+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.++++
T Consensus 271 ~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~~~~~~~ 338 (359)
T cd03823 271 IWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLF----------PPGDAEDLAAALERLIDD--PDLLERLRA 338 (359)
T ss_pred cccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEE----------CCCCHHHHHHHHHHHHhC--hHHHHHHHH
Confidence 8 699999999999999999999999999999999899987 999999999999999997 677778877
Q ss_pred HHHHhhcCcHHHHHHHHHHHH
Q 007212 565 NGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 565 ~~~~~~fsw~~~a~~~~~~y~ 585 (612)
++.. .++.+.++++|+++|+
T Consensus 339 ~~~~-~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 339 GIEP-PRSIEDQAEEYLKLYR 358 (359)
T ss_pred hHHH-hhhHHHHHHHHHHHhh
Confidence 7643 3445999999999886
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=285.52 Aligned_cols=349 Identities=15% Similarity=0.105 Sum_probs=238.2
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+++++.+ + .||.+.++.+++++|.+.||+|+++++..... .+.. .....|++++
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~--~~~~------------------~~~~~~~~~~ 56 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEG--DYDD------------------EIEKLGGKIY 56 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCc--chHH------------------HHHHcCCeEE
Confidence 799999876 3 79999999999999999999999999874321 0000 0011234443
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+.... . ... .+.....+.++.. +||+ +|+|......++.
T Consensus 57 ~~~~~~--~---------------------~~~---~~~~~~~~~~~~~-------------~~Dv-v~~~~~~~~~~~~ 96 (358)
T cd03812 57 YIPARK--K---------------------NPL---KYFKKLYKLIKKN-------------KYDI-VHVHGSSASGFIL 96 (358)
T ss_pred EecCCC--c---------------------cHH---HHHHHHHHHHhcC-------------CCCE-EEEeCcchhHHHH
Confidence 321100 0 011 1112222333332 4895 8998766555555
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
.+.... ....++++.|+..+....... ......+.+..++.+|.++++|
T Consensus 97 ~~~~~~------~~~~~v~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~i~~s 145 (358)
T cd03812 97 LAAKKA------GVKVRIAHSHNTSDSHDKKKK-------------------------ILKYKVLRKLINRLATDYLACS 145 (358)
T ss_pred HHHhhC------CCCeEEEEeccccccccccch-------------------------hhHHHHHHHHHHhcCCEEEEcC
Confidence 444332 233456778865432211000 0000122455677899999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+. .. ..++.+||||+|.+.+.+.... ++. +++.+... +.++
T Consensus 146 ~~~~~~~~~~----~~------~~~~~vi~ngvd~~~~~~~~~~------------------~~~-~~~~~~~~--~~~~ 194 (358)
T cd03812 146 EEAGKWLFGK----VK------NKKFKVIPNGIDLEKFIFNEEI------------------RKK-RRELGILE--DKFV 194 (358)
T ss_pred HHHHHHHHhC----CC------cccEEEEeccCcHHHcCCCchh------------------hhH-HHHcCCCC--CCEE
Confidence 9999988752 12 2389999999999877654320 111 44455443 4589
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
|+|+||+.++||++.+++|+..+.+ ++++++|+|+|+ ..+.+++...++ ++++.+.+. .+++..+++.||++
T Consensus 195 i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~ 270 (358)
T cd03812 195 IGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE--LEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVF 270 (358)
T ss_pred EEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEE
Confidence 9999999999999999999999975 699999999988 455566665444 356776665 44566899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 561 (612)
|+||+.|++|++++|||++|+|||+|+.||..|++.++ .|++. .++++++++++|.+++++ ++..+.
T Consensus 271 v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~-~~~~~----------~~~~~~~~a~~i~~l~~~--~~~~~~ 337 (358)
T cd03812 271 LFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDL-VKFLS----------LDESPEIWAEEILKLKSE--DRRERS 337 (358)
T ss_pred EecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccC-ccEEe----------CCCCHHHHHHHHHHHHhC--cchhhh
Confidence 99999999999999999999999999999999999984 45543 667899999999999998 556666
Q ss_pred HHHHHHHhhcCcHHHH
Q 007212 562 MMKNGMAQDLSWKGPA 577 (612)
Q Consensus 562 ~~~~~~~~~fsw~~~a 577 (612)
+..++..+..+++...
T Consensus 338 ~~~~~~~~~~~~~~~~ 353 (358)
T cd03812 338 SESIKKKGLDADDEAN 353 (358)
T ss_pred hhhhhhccchhhhhhh
Confidence 6666655544554443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=281.56 Aligned_cols=365 Identities=22% Similarity=0.297 Sum_probs=254.0
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..|+|. .||.+..+..++++|+++||+|+++++............ ++...
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 56 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVV----------------------VVRPF 56 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccccc----------------------ccccc
Confidence 799999999887 899999999999999999999999998754322210000 00000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCC-CcccchH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAND-WHTSLIP 244 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~-~~~~~~~ 244 (612)
..... ...+ ....+ .+.....+.++.. +||+ +|+|. +..+...
T Consensus 57 ~~~~~-~~~~--------------------~~~~~-~~~~~~~~~~~~~-------------~~Di-v~~~~~~~~~~~~ 100 (374)
T cd03817 57 RVPTF-KYPD--------------------FRLPL-PIPRALIIILKEL-------------GPDI-VHTHTPFSLGLLG 100 (374)
T ss_pred ccccc-hhhh--------------------hhccc-cHHHHHHHHHhhc-------------CCCE-EEECCchhhhhHH
Confidence 00000 0000 00000 1111222223332 4895 77775 3333333
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchh-HHHHHHHhhCCEEEe
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLT 323 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~l~~ad~vi~ 323 (612)
..+... .++|+++++|+.... +. .......... ..... .+++..+..+|.+++
T Consensus 101 ~~~~~~-------~~~~~i~~~~~~~~~--~~----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~d~i~~ 154 (374)
T cd03817 101 LRVARK-------LGIPVVATYHTMYED--YT----HYVPLGRLLA-------------RAVVRRKLSRRFYNRCDAVIA 154 (374)
T ss_pred HHHHHH-------cCCCEEEEecCCHHH--HH----HHHhcccchh-------------HHHHHHHHHHHHhhhCCEEEe
Confidence 333333 488999999965320 00 0000000000 00111 356778889999999
Q ss_pred cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007212 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 403 (612)
+|+..++.+.. ++.. .++.++|||+|...+.+... ...++++++.. +.
T Consensus 155 ~s~~~~~~~~~---~~~~-------~~~~vi~~~~~~~~~~~~~~--------------------~~~~~~~~~~~--~~ 202 (374)
T cd03817 155 PSEKIADLLRE---YGVK-------RPIEVIPTGIDLDRFEPVDG--------------------DDERRKLGIPE--DE 202 (374)
T ss_pred ccHHHHHHHHh---cCCC-------CceEEcCCccchhccCccch--------------------hHHHHhcCCCC--CC
Confidence 99999998875 3432 26899999999988766431 22245555543 45
Q ss_pred cEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhcc
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
++|+|+|++.+.||++.++++++.+.+ ++++|+++|.|+ ..+.++++..++ .+++.+.+..+.+++..+++.||
T Consensus 203 ~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 280 (374)
T cd03817 203 PVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--EREELEELARELGLADRVIFTGFVPREELPDYYKAAD 280 (374)
T ss_pred eEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcC
Confidence 899999999999999999999999876 789999999987 455566665443 35688888888888889999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 559 (612)
++++||..|++|++++|||++|+|||+++.|+..|++.++.+|+++ ++.|. +++++|.+++++ ++.+
T Consensus 281 ~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~-~~~~~i~~l~~~--~~~~ 347 (374)
T cd03817 281 LFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLF----------PPGDE-ALAEALLRLLQD--PELR 347 (374)
T ss_pred EEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEe----------CCCCH-HHHHHHHHHHhC--hHHH
Confidence 9999999999999999999999999999999999999999999986 77777 999999999998 6666
Q ss_pred HHHHHHHH--HhhcCcHHHHHHHHHHHHH
Q 007212 560 AEMMKNGM--AQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 560 ~~~~~~~~--~~~fsw~~~a~~~~~~y~~ 586 (612)
+++++++. .++++ .+++++++|++
T Consensus 348 ~~~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 348 RRLSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 77777763 34444 66777777765
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=281.34 Aligned_cols=341 Identities=20% Similarity=0.220 Sum_probs=247.1
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+|++..|+| |.+.++.+++++|.++||+|+|+++.........+.. . ..+..+
T Consensus 1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~--------------~-----~~~~~~- 55 (355)
T cd03799 1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHPED--------------R-----AELART- 55 (355)
T ss_pred CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCcccccccccc--------------c-----ccccch-
Confidence 79999998755 2677899999999999999999998743211100000 0 000000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
. |......+..+.......++. .+||+ +|+|.+.......
T Consensus 56 ------------------~--------~~~~~~~~~~~~~~~~~~~~~-------------~~~Di-i~~~~~~~~~~~~ 95 (355)
T cd03799 56 ------------------R--------YLARSLALLAQALVLARELRR-------------LGIDH-IHAHFGTTPATVA 95 (355)
T ss_pred ------------------H--------HHHHHHHHHHHHHHHHHHHHh-------------cCCCE-EEECCCCchHHHH
Confidence 0 000111111112222222222 24895 9999765544444
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
.+.... .+.|+++++|+...... ....+++..++.+|.++++|
T Consensus 96 ~~~~~~------~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~vi~~s 138 (355)
T cd03799 96 MLASRL------GGIPYSFTAHGKDIFRS-------------------------------PDAIDLDEKLARADFVVAIS 138 (355)
T ss_pred HHHHHh------cCCCEEEEEeccccccc-------------------------------CchHHHHHHHhhCCEEEECC
Confidence 444332 37899999995432110 00134677788999999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+. +|.... ++.+||||+|.+.+.+... . ...+.+.
T Consensus 139 ~~~~~~l~~~--~~~~~~------~~~vi~~~~d~~~~~~~~~---------------------------~--~~~~~~~ 181 (355)
T cd03799 139 EYNRQQLIRL--LGCDPD------KIHVVHCGVDLERFPPRPP---------------------------P--PPGEPLR 181 (355)
T ss_pred HHHHHHHHHh--cCCCcc------cEEEEeCCcCHHHcCCccc---------------------------c--ccCCCeE
Confidence 9999999862 244333 8999999999887765420 0 1124578
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
|+|+|++.+.||++.+++++..+.+ ++++|+++|.++ ..+.+++...++ ++++.+.+..+.+++..+++.||++
T Consensus 182 i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~ 259 (355)
T cd03799 182 ILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGP--LRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLF 259 (355)
T ss_pred EEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCc--cHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEE
Confidence 9999999999999999999999876 589999999987 344555555543 4568888888888889999999999
Q ss_pred EEcCCC------CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007212 482 LIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 482 v~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 555 (612)
++||.. |++|++++|||++|+|+|+++.|+..|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 260 l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~-- 327 (355)
T cd03799 260 VLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLV----------PPGDPEALADAIERLLDD-- 327 (355)
T ss_pred EecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEe----------CCCCHHHHHHHHHHHHhC--
Confidence 999999 99999999999999999999999999999999899976 888999999999999998
Q ss_pred HHHHHHHHHHH---HHhhcCcHHHHHH
Q 007212 556 TQALAEMMKNG---MAQDLSWKGPAKK 579 (612)
Q Consensus 556 ~~~~~~~~~~~---~~~~fsw~~~a~~ 579 (612)
+..+.++++++ +.++|||+..+++
T Consensus 328 ~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 328 PELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 66677777766 4688999998875
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=302.08 Aligned_cols=227 Identities=16% Similarity=0.158 Sum_probs=173.6
Q ss_pred CCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCC
Q 007212 318 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 318 ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl 397 (612)
++.+++.|...++.+.. .+|++.+ ++.+||||+|...|.+... ....+..+..
T Consensus 459 ~~i~Vs~S~~~~~~l~~--~~g~~~~------kI~VI~NGVd~~~f~~~~~-------------------~~~~~~~~~~ 511 (694)
T PRK15179 459 GVALSSNSQFAAHRYAD--WLGVDER------RIPVVYNGLAPLKSVQDDA-------------------CTAMMAQFDA 511 (694)
T ss_pred CeEEEeCcHHHHHHHHH--HcCCChh------HEEEECCCcCHHhcCCCch-------------------hhHHHHhhcc
Confidence 45667777877777664 2566544 8999999999887765321 0111111211
Q ss_pred CCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHH
Q 007212 398 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHM 473 (612)
Q Consensus 398 ~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ 473 (612)
....+.++|+++||+.++||++.+++|++++.+ ++++|+|+|+|+ ..+.++++..+++ ++|.+.+. .. .+..
T Consensus 512 ~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~--~~~~L~~l~~~lgL~~~V~flG~-~~-dv~~ 587 (694)
T PRK15179 512 RTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP--LLESVREFAQRLGMGERILFTGL-SR-RVGY 587 (694)
T ss_pred ccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc--chHHHHHHHHHcCCCCcEEEcCC-cc-hHHH
Confidence 112245799999999999999999999998864 789999999987 5667777777654 56766554 33 4568
Q ss_pred HHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCC--HHHHHHHHHHHH
Q 007212 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRAL 551 (612)
Q Consensus 474 i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d--~~~la~~i~~ll 551 (612)
+|+.+|++|+||.+|+||++++|||+||+|||+|+.||..|+|.++.+|+++ +++| .++++++|.+++
T Consensus 588 ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv----------~~~d~~~~~La~aL~~ll 657 (694)
T PRK15179 588 WLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL----------PADTVTAPDVAEALARIH 657 (694)
T ss_pred HHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEe----------CCCCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999986 7666 468999998888
Q ss_pred HhhC-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 552 ATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 552 ~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
.+.. .+.+.+.+++...++|||+.++++|+++|+
T Consensus 658 ~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 658 DMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred hChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 7532 133333444445689999999999999995
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-31 Score=275.72 Aligned_cols=367 Identities=26% Similarity=0.382 Sum_probs=262.4
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..++|. .||...++..|+++|.+.||+|.++++............ .....
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~----------------------~~~~~ 56 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVG----------------------GIVVV 56 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeec----------------------Cccee
Confidence 799999998885 799999999999999999999999998744322210000 00000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.. ... . ..+ ...............++.. +||+ +|+|.+.......
T Consensus 57 ~~--~~~-~--------~~~----------~~~~~~~~~~~~~~~~~~~-------------~~Di-i~~~~~~~~~~~~ 101 (374)
T cd03801 57 RP--PPL-L--------RVR----------RLLLLLLLALRLRRLLRRE-------------RFDV-VHAHDWLALLAAA 101 (374)
T ss_pred cC--Ccc-c--------ccc----------hhHHHHHHHHHHHHHhhhc-------------CCcE-EEEechhHHHHHH
Confidence 00 000 0 000 0011111222223333332 4895 8888777666554
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
..... .+.|+++++|+..+...... .. ........+.+..++.+|.++++|
T Consensus 102 ~~~~~-------~~~~~i~~~h~~~~~~~~~~---------~~-------------~~~~~~~~~~~~~~~~~d~~i~~s 152 (374)
T cd03801 102 LAARL-------LGIPLVLTVHGLEFGRPGNE---------LG-------------LLLKLARALERRALRRADRIIAVS 152 (374)
T ss_pred HHHHh-------cCCcEEEEeccchhhccccc---------hh-------------HHHHHHHHHHHHHHHhCCEEEEec
Confidence 33322 58999999997655221110 00 000112344566788999999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+. ++.+.+ ++.++|||+|...+.+.. ...+.....+ .+.++
T Consensus 153 ~~~~~~~~~~--~~~~~~------~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~--~~~~~ 201 (374)
T cd03801 153 EATREELREL--GGVPPE------KITVIPNGVDTERFRPAP---------------------RAARRRLGIP--EDEPV 201 (374)
T ss_pred HHHHHHHHhc--CCCCCC------cEEEecCcccccccCccc---------------------hHHHhhcCCc--CCCeE
Confidence 9999999862 332222 899999999988775531 1122222222 34579
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHH--CCCceEEEeccChHHHHHHHHhccEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
|+|+|++.+.||++.+++++..+.+ ++++|+++|.+. ..+.++++..+ .+.++.+.+..+.+++..+++.||++
T Consensus 202 i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~ 279 (374)
T cd03801 202 ILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP--LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVF 279 (374)
T ss_pred EEEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH--HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEE
Confidence 9999999999999999999999876 589999999776 45555555433 34578888888888888999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 561 (612)
++|+..|++|++++|||++|+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.+
T Consensus 280 i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~~ 347 (374)
T cd03801 280 VLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLV----------PPGDPEALAEAILRLLDD--PELRRR 347 (374)
T ss_pred EecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEe----------CCCCHHHHHHHHHHHHcC--hHHHHH
Confidence 99999999999999999999999999999999999988999987 889999999999999998 666677
Q ss_pred HHHHH---HHhhcCcHHHHHHHHHHHH
Q 007212 562 MMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 562 ~~~~~---~~~~fsw~~~a~~~~~~y~ 585 (612)
+++++ ..+.|||+..++++.++|+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 348 LGEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 77765 4799999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-31 Score=278.94 Aligned_cols=349 Identities=21% Similarity=0.244 Sum_probs=241.0
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+||+.+ +|. .||.+.++.+|+++|+++||+|.+++........ ..... . .+....
T Consensus 1 kI~~v~~~-~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~--~~~~~----------~--------~~~~~~ 57 (366)
T cd03822 1 RIALVSPY-PPR--KCGIATFTTDLVNALSARGPDVLVVSVAALYPSL--LYGGE----------Q--------EVVRVI 57 (366)
T ss_pred CeEEecCC-CCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcc--cCCCc----------c--------cceeee
Confidence 79999876 454 7999999999999999999999999866321111 00000 0 000000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
. .+ +. .......+.++.. +||+ +|+|.|...+.+.
T Consensus 58 -~----------------~~----------~~----~~~~~~~~~~~~~-------------~~di-i~~~~~~~~~~~~ 92 (366)
T cd03822 58 -V----------------LD----------NP----LDYRRAARAIRLS-------------GPDV-VVIQHEYGIFGGE 92 (366)
T ss_pred -e----------------cC----------Cc----hhHHHHHHHHhhc-------------CCCE-EEEeeccccccch
Confidence 0 00 00 0111222333332 4895 7887765433222
Q ss_pred H---HHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 246 Y---LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 246 ~---l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
. +....+ ..+.|+|+++|+...... ......+++..++.+|.++
T Consensus 93 ~~~~~~~~~~----~~~~~~i~~~h~~~~~~~-----------------------------~~~~~~~~~~~~~~~d~ii 139 (366)
T cd03822 93 AGLYLLLLLR----GLGIPVVVTLHTVLLHEP-----------------------------RPGDRALLRLLLRRADAVI 139 (366)
T ss_pred hhHHHHHHHh----hcCCCEEEEEecCCcccc-----------------------------chhhhHHHHHHHhcCCEEE
Confidence 2 221111 148899999997511000 0012234566788999999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
++|....+.+... .+ ..++.+|+||+|...+.+... . ++...+ .+
T Consensus 140 ~~s~~~~~~~~~~--~~--------~~~~~~i~~~~~~~~~~~~~~---------------------~--~~~~~~--~~ 184 (366)
T cd03822 140 VMSSELLRALLLR--AY--------PEKIAVIPHGVPDPPAEPPES---------------------L--KALGGL--DG 184 (366)
T ss_pred EeeHHHHHHHHhh--cC--------CCcEEEeCCCCcCcccCCchh---------------------h--HhhcCC--CC
Confidence 9974444444321 11 128999999999876654311 0 222222 24
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHH-------HHHHHHHCCCceEEEec-cChHHHH
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQ-------LEQLEILYPEKARGVAK-FNIPLAH 472 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~-------l~~l~~~~~~~v~~~~~-~~~~~~~ 472 (612)
.++|+|+|++.+.||++.+++|+.++.+ ++++|+|+|.+....... ++++ ....++.+.+. .+.+++.
T Consensus 185 ~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~--~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 185 RPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERL--GLADRVIFINRYLPDEELP 262 (366)
T ss_pred CeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhc--CCCCcEEEecCcCCHHHHH
Confidence 5899999999999999999999999976 689999999976433222 2232 23457888888 5778888
Q ss_pred HHHHhccEEEEcCCCC--CCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHH
Q 007212 473 MIIAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~E--~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~l 550 (612)
.+++.||++++||.+| ++|++++|||++|+|||+++.|+ .+.+.++.+|+++ ++.|+++++++|..+
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~----------~~~d~~~~~~~l~~l 331 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLV----------PPGDPAALAEAIRRL 331 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEE----------cCCCHHHHHHHHHHH
Confidence 9999999999999999 99999999999999999999999 7778888899987 899999999999999
Q ss_pred HHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHH
Q 007212 551 LATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~ 585 (612)
+++ ++.+.++++++ ..+.|||+.++++|.++|+
T Consensus 332 ~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 332 LAD--PELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred HcC--hHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 998 66777777776 3455999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-31 Score=286.30 Aligned_cols=229 Identities=14% Similarity=0.102 Sum_probs=182.6
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
+.....+|.+++.|++.++.+.+. ++. . .++.+|+||+|...+.....
T Consensus 215 ~~~~~~ad~ii~nS~~t~~~l~~~--~~~-~------~~i~vvyp~vd~~~~~~~~~----------------------- 262 (463)
T PLN02949 215 GLVGRCAHLAMVNSSWTKSHIEAL--WRI-P------ERIKRVYPPCDTSGLQALPL----------------------- 262 (463)
T ss_pred HHHcCCCCEEEECCHHHHHHHHHH--cCC-C------CCeEEEcCCCCHHHcccCCc-----------------------
Confidence 445578999999999999998762 222 1 27899999999765532110
Q ss_pred HHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCC----hhHHHHHHHHHHHC--CCc
Q 007212 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILY--PEK 459 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~--~~~ 459 (612)
....+.+.++++||++++||++.+|+|++++.+ ++++|+|+|++. .++.+++++++.++ .++
T Consensus 263 ------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 263 ------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred ------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCc
Confidence 011234789999999999999999999998643 589999999874 23456777777765 367
Q ss_pred eEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc-cceec---CcceEEecccccccccC
Q 007212 460 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 460 v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~v~~---g~~G~~~~~~~~~~~~v 535 (612)
+.+.+..+.+++..+|+.||++++||..|+||++++|||++|+|||+++.||.. |++.+ +.+|+++
T Consensus 337 V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~---------- 406 (463)
T PLN02949 337 VEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA---------- 406 (463)
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC----------
Confidence 889888888888899999999999999999999999999999999999999875 77765 6789953
Q ss_pred CCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHHHcC
Q 007212 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 536 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~~~ 591 (612)
.|+++++++|.+++++. ++.+++|++++ ..++|||+.++++|++.|.++++.+
T Consensus 407 --~~~~~la~ai~~ll~~~-~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~~ 461 (463)
T PLN02949 407 --TTVEEYADAILEVLRMR-ETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNSA 461 (463)
T ss_pred --CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhh
Confidence 49999999999999852 45566676665 2477999999999999999988654
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=281.07 Aligned_cols=359 Identities=19% Similarity=0.195 Sum_probs=251.2
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+.|. ..||++.++.+|+++|+++||+|+++++.............. ...
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~---------------------~~~- 57 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAA---------------------LRL- 57 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhc---------------------ccc-
Confidence 799999998872 489999999999999999999999999874432221100000 000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
..... + .....++............. .+||+ +|+|.+.....
T Consensus 58 -~~~~~-------------~--------~~~~~~~~~~~~~~~~~~~~-------------~~~Di-i~~~~~~~~~~-- 99 (365)
T cd03809 58 -LLRLP-------------R--------RLLWGLLFLLRAGDRLLLLL-------------LGLDL-LHSPHNTAPLL-- 99 (365)
T ss_pred -ccccc-------------c--------ccccchhhHHHHHHHHHhhh-------------cCCCe-eeecccccCcc--
Confidence 00000 0 00000111111111111221 14895 88887665554
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
+ ..+.|+++++|+..+... + ...... .......+++..++.+|.++++|
T Consensus 100 --~--------~~~~~~i~~~hd~~~~~~-~----------~~~~~~----------~~~~~~~~~~~~~~~~d~~i~~s 148 (365)
T cd03809 100 --R--------LRGVPVVVTIHDLIPLRF-P----------EYFSPG----------FRRYFRRLLRRALRRADAIITVS 148 (365)
T ss_pred --c--------CCCCCEEEEeccchhhhC-c----------ccCCHH----------HHHHHHHHHHHHHHHcCEEEEcc
Confidence 1 158999999997654211 0 000000 00112345677889999999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+. ++...+ ++.+|+||+|...+.+... .. +...... .+.++
T Consensus 149 ~~~~~~~~~~--~~~~~~------~~~vi~~~~~~~~~~~~~~-------------------~~--~~~~~~~--~~~~~ 197 (365)
T cd03809 149 EATKRDLLRY--LGVPPD------KIVVIPLGVDPRFRPPPAE-------------------AE--VLRALYL--LPRPY 197 (365)
T ss_pred HHHHHHHHHH--hCcCHH------HEEeeccccCccccCCCch-------------------HH--HHHHhcC--CCCCe
Confidence 9999999862 333333 8999999999988765432 11 2222222 24579
Q ss_pred EEEEccCccccCHHHHHHHHHhcccC--CeEEEEEecCChhHHHHHHHHH-HHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLE-ILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~~--~~~lvivG~g~~~~~~~l~~l~-~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
|+|+|++.+.||++.+++++..+.+. +++|+++|.+........+.+. ....+++.+.+..+.+++..+++.||+++
T Consensus 198 i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 198 FLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred EEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhc
Confidence 99999999999999999999999774 6999999987643333333321 22346788888888888999999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 562 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 562 (612)
+||.+|++|++++|||++|+|||+++.|++.|++.+ +|+.+ ++.|+++++++|.+++++ ++.+.++
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~--~~~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~ 343 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD--AALYF----------DPLDPEALAAAIERLLED--PALREEL 343 (365)
T ss_pred ccchhccCCCCHHHHhcCCCcEEecCCCCccceecC--ceeee----------CCCCHHHHHHHHHHHhcC--HHHHHHH
Confidence 999999999999999999999999999999999864 57755 889999999999999988 6777777
Q ss_pred HHHH--HHhhcCcHHHHHHHH
Q 007212 563 MKNG--MAQDLSWKGPAKKWE 581 (612)
Q Consensus 563 ~~~~--~~~~fsw~~~a~~~~ 581 (612)
++++ ..++|||+..++++.
T Consensus 344 ~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 344 RERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHHHHHHhCCHHHHHHHHh
Confidence 7776 568899999999886
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-33 Score=277.96 Aligned_cols=234 Identities=40% Similarity=0.701 Sum_probs=175.4
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCc-cEEEE--------EEeCCeeeEEEEEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIE--------LKVGDKIEKVRFFH 156 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~ 156 (612)
||++|+.|++|+.++||+++++..|+++|+++||+|.|++|.|+...+.... ....+ +.+.. ...+++++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEE
Confidence 7999999999999999999999999999999999999999999877665421 11111 12221 15678888
Q ss_pred eeecCceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeC
Q 007212 157 CHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAN 236 (612)
Q Consensus 157 ~~~~gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h 236 (612)
...+||++++++++.++++ ..+|++. +.+|.|+..||.+|+++++++++.+++ +||| ||||
T Consensus 80 ~~~~~v~v~~i~~~~~f~r------~~iY~~~-~~~~~d~~~rf~~fs~a~le~~~~l~~-----------~pDI-IH~h 140 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPEYFDR------PGIYGDN-GGDYPDNAERFAFFSRAALELLKKLGW-----------KPDI-IHCH 140 (245)
T ss_dssp EEETTEEEEEEESHHHHGS------SSSSBST-SSBHTTHHHHHHHHHHHHHHHHCTCT------------S-SE-EEEE
T ss_pred EEcCCccEEEecChhhccc------cceeccC-CCcchhHHHHHHHHHHHHHHHHHhhCC-----------CCCE-EEec
Confidence 8889999999999999886 5699876 788999999999999999999999865 4995 8999
Q ss_pred CCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHh
Q 007212 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 316 (612)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~ 316 (612)
|||++++|.+++..++..+.+.++|+++||||+.+||.++...+..++++....... +.+ .....+|++|.++.
T Consensus 141 DW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~---~~~---~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 141 DWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNL---DEY---EFYGQINFLKAGIV 214 (245)
T ss_dssp CGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-ST---TTT---EETTEEEHHHHHHH
T ss_pred CchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccc---ccc---ccccccCHHHHHHH
Confidence 999999999999988777777899999999999999999988888888886432211 111 12357899999999
Q ss_pred hCCEEEecCHHHHHHHHcCcCCCccchhhh
Q 007212 317 ESDMVLTVSPHYAQELVSGEDKGVELDNII 346 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~ 346 (612)
.||.|+|||+.+++++++ ..+|..+++++
T Consensus 215 ~AD~v~TVS~~Ya~Ei~~-~~~g~GL~~~l 243 (245)
T PF08323_consen 215 YADKVTTVSPTYAREIQT-PEFGEGLEGLL 243 (245)
T ss_dssp HSSEEEESSHHHHHHTTS-HHHHTT-HHHH
T ss_pred hcCEeeeCCHHHHHHHhC-cccCCChHHHh
Confidence 999999999999999996 34455555444
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=273.07 Aligned_cols=372 Identities=24% Similarity=0.322 Sum_probs=257.9
Q ss_pred EEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEEE
Q 007212 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (612)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (612)
|+++++.++| ...||.+.++..++++|.+.||+|+++++............... . ....
T Consensus 1 iLii~~~~p~-~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~-----------------~---~~~~ 59 (377)
T cd03798 1 ILVISSLYPP-PNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRL-----------------V---GVER 59 (377)
T ss_pred CeEeccCCCC-CCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhccccc-----------------c---cccc
Confidence 6888888766 24599999999999999999999999998643222211000000 0 0000
Q ss_pred EeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCC-CcccchHH
Q 007212 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAND-WHTSLIPC 245 (612)
Q Consensus 167 v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~-~~~~~~~~ 245 (612)
...... ... ..........+.......++... .+||+ +|+|. +....+..
T Consensus 60 ~~~~~~-----------~~~------~~~~~~~~~~~~~~~~~~l~~~~-----------~~~di-i~~~~~~~~~~~~~ 110 (377)
T cd03798 60 LPVLLP-----------VVP------LLKGPLLYLLAARALLKLLKLKR-----------FRPDL-IHAHFAYPDGFAAA 110 (377)
T ss_pred cccCcc-----------hhh------ccccchhHHHHHHHHHHHHhccc-----------CCCCE-EEEeccchHHHHHH
Confidence 000000 000 00011122233333444443111 25896 67763 33333333
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
.+... .++|+++++|+........ .......++..+..+|.++++|
T Consensus 111 ~~~~~-------~~~~~i~~~h~~~~~~~~~---------------------------~~~~~~~~~~~~~~~d~ii~~s 156 (377)
T cd03798 111 LLKRK-------LGIPLVVTLHGSDVNLLPR---------------------------KRLLRALLRRALRRADAVIAVS 156 (377)
T ss_pred HHHHh-------cCCCEEEEeecchhcccCc---------------------------hhhHHHHHHHHHhcCCeEEeCC
Confidence 33332 3689999999765421100 0012345677889999999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+ .+.. ..++.+++||+|...+.+.... .. ...+.. .+.++
T Consensus 157 ~~~~~~~~~---~~~~------~~~~~~i~~~~~~~~~~~~~~~-------------------~~--~~~~~~--~~~~~ 204 (377)
T cd03798 157 EALADELKA---LGID------PEKVTVIPNGVDTERFSPADRA-------------------EA--RKLGLP--EDKKV 204 (377)
T ss_pred HHHHHHHHH---hcCC------CCceEEcCCCcCcccCCCcchH-------------------HH--HhccCC--CCceE
Confidence 999999986 2222 2389999999999888765321 00 222332 34589
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
|+|+|++.+.||++.++++++.+.+ ++++++++|.+. ..+.++++.... ..++.+.+..+.+++..+++.||++
T Consensus 205 i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~ 282 (377)
T cd03798 205 ILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP--LREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVF 282 (377)
T ss_pred EEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc--chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCee
Confidence 9999999999999999999999976 589999999987 334455554432 3568888888888888999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 561 (612)
++||..|++|++++|||++|+|+|+++.++..+++.++.+|+++ ++.|+++++++|.++++++.. ....
T Consensus 283 i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~~~-~~~~ 351 (377)
T cd03798 283 VLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLV----------PPGDPEALAEAILRLLADPWL-RLGR 351 (377)
T ss_pred ecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEE----------CCCCHHHHHHHHHHHhcCcHH-HHhH
Confidence 99999999999999999999999999999999999999999977 999999999999999998432 2333
Q ss_pred HHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 562 MMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 562 ~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
.+.....+.|||+..++++.++|+++
T Consensus 352 ~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 352 AARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 33344689999999999999999764
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-30 Score=280.76 Aligned_cols=372 Identities=13% Similarity=0.059 Sum_probs=238.0
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
..+|++++.. -+|.+..+..++++|+++||+|+|++.......+. .....||.
T Consensus 3 ~~~~~~~~~~------~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~---------------------~~~~~~v~ 55 (415)
T cd03816 3 RKRVCVLVLG------DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDE---------------------ILSNPNIT 55 (415)
T ss_pred ccEEEEEEec------ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHH---------------------HhcCCCEE
Confidence 4567777763 35566678899999999999999999763211100 01134666
Q ss_pred EEEEeCcc-ccccccCCCCCcccCCCCCCCCchhhHHH-HHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcc-
Q 007212 164 RVFVDHPW-FLAKVWGKTQSKIYGPRTGEDYQDNQLRF-SLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHT- 240 (612)
Q Consensus 164 ~~~v~~~~-~~~~~~g~~~~~~y~~~~g~~~~~~~~r~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~- 240 (612)
++.+..+. ... ......++ .......+..++.+... .+||+ +|+|.-..
T Consensus 56 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~Dv-i~~~~~~~~ 107 (415)
T cd03816 56 IHPLPPPPQRLN------------------KLPFLLFAPLKVLWQFFSLLWLLYKL---------RPADY-ILIQNPPSI 107 (415)
T ss_pred EEECCCCccccc------------------cchHHHHHHHHHHHHHHHHHHHHHhc---------CCCCE-EEEeCCCCc
Confidence 66664322 000 00111111 11111122222211100 25896 77875222
Q ss_pred --cchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH-HHHHHHhh
Q 007212 241 --SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN-WMKAGILE 317 (612)
Q Consensus 241 --~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~k~~l~~ 317 (612)
+.++.+++.. .++|+|+++|+..+. .. ..+... .....+... +++..++.
T Consensus 108 ~~~~~a~~~~~~-------~~~~~V~~~h~~~~~-~~------~~~~~~-------------~~~~~~~~~~~e~~~~~~ 160 (415)
T cd03816 108 PTLLIAWLYCLL-------RRTKLIIDWHNYGYT-IL------ALKLGE-------------NHPLVRLAKWYEKLFGRL 160 (415)
T ss_pred hHHHHHHHHHHH-------hCCeEEEEcCCchHH-HH------hcccCC-------------CCHHHHHHHHHHHHHhhc
Confidence 2223333333 488999999975321 00 000000 000001222 33556778
Q ss_pred CCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHH----
Q 007212 318 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA---- 393 (612)
Q Consensus 318 ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~---- 393 (612)
+|.++++|+.+++.+.+ +|...+ ++.+||||. ...|.|.... .....+.+
T Consensus 161 ad~ii~vS~~~~~~l~~---~~~~~~------ki~vI~Ng~-~~~f~p~~~~----------------~~~~~~~~~~~~ 214 (415)
T cd03816 161 ADYNLCVTKAMKEDLQQ---FNNWKI------RATVLYDRP-PEQFRPLPLE----------------EKHELFLKLAKT 214 (415)
T ss_pred CCEeeecCHHHHHHHHh---hhccCC------CeeecCCCC-HHHceeCcHH----------------HHHHHHHhcccc
Confidence 99999999999999985 555444 999999994 4556654310 00111111
Q ss_pred ---------HhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--------CCeEEEEEecCChhHHHHHHHHHHHC
Q 007212 394 ---------EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--------ENVQIIVLGTGKKPMEKQLEQLEILY 456 (612)
Q Consensus 394 ---------~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--------~~~~lvivG~g~~~~~~~l~~l~~~~ 456 (612)
..++.. ++..+++++||+.++||++.|++|++.+.+ ++++|+|+|+|+ .++.++++..++
T Consensus 215 ~~~~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~--~~~~l~~~~~~~ 291 (415)
T cd03816 215 FLTRELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP--LKEKYLERIKEL 291 (415)
T ss_pred ccccccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc--cHHHHHHHHHHc
Confidence 112222 234688899999999999999999999853 479999999998 566677776665
Q ss_pred C-CceEEEec-cChHHHHHHHHhccEEEEcCC---CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccc
Q 007212 457 P-EKARGVAK-FNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 531 (612)
Q Consensus 457 ~-~~v~~~~~-~~~~~~~~i~~~aDv~v~pS~---~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~ 531 (612)
+ .++.++.+ .+.++++.+|+.||+++.|+. .|++|++++|||+||+|||+++.||..|+|+++.+|+++
T Consensus 292 ~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv------ 365 (415)
T cd03816 292 KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVF------ 365 (415)
T ss_pred CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEE------
Confidence 4 34666654 577888899999999997543 478999999999999999999999999999999999975
Q ss_pred cccCCCCCHHHHHHHHHHHHHhh-CHHHHHHHHHHHH-HhhcCcHHHHH
Q 007212 532 CEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGM-AQDLSWKGPAK 578 (612)
Q Consensus 532 ~~~v~~~d~~~la~~i~~ll~~~-~~~~~~~~~~~~~-~~~fsw~~~a~ 578 (612)
.|+++++++|.+++++. .++.+.+|++++. ...++|+...+
T Consensus 366 ------~d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~~~~~~~~ 408 (415)
T cd03816 366 ------GDSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESELRWDENWD 408 (415)
T ss_pred ------CCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhcCHHHHHH
Confidence 38999999999999972 1567788888874 34566655443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=270.83 Aligned_cols=340 Identities=21% Similarity=0.230 Sum_probs=236.4
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+.| .||.+.++..|+++|+++||+|+++++.... ...+. ...++.+.
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~~~---------------------~~~~~~~~ 55 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-PPFYE---------------------LDPKIKVI 55 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-CCccc---------------------cCCcccee
Confidence 79999988766 6999999999999999999999999987442 11000 11223333
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+...... . .+ ..........+.++. .+||+ +++|.+. ...
T Consensus 56 ~~~~~~~~-~--------~~-------------~~~~~~~~~~~~l~~-------------~~~d~-i~~~~~~---~~~ 96 (348)
T cd03820 56 DLGDKRDS-K--------LL-------------ARFKKLRRLRKLLKN-------------NKPDV-VISFLTS---LLT 96 (348)
T ss_pred eccccccc-c--------hh-------------ccccchHHHHHhhcc-------------cCCCE-EEEcCch---HHH
Confidence 32211100 0 00 000111122222222 25896 7777655 222
Q ss_pred HHHhhhcCCCCcCC-ceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 246 YLKTMYKPKGMYKS-AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 246 ~l~~~~~~~~~~~~-~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
++.... .+ .|++++.|+........ .......+..++.+|.++++
T Consensus 97 ~~~~~~------~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~d~ii~~ 142 (348)
T cd03820 97 FLASLG------LKIVKLIVSEHNSPDAYKKR----------------------------LRRLLLRRLLYRRADAVVVL 142 (348)
T ss_pred HHHHHh------hccccEEEecCCCccchhhh----------------------------hHHHHHHHHHHhcCCEEEEe
Confidence 222221 23 48999999643311000 00111367788999999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+..+.... ... ..++.+||||++...+.+. . ..+.+
T Consensus 143 s~~~~~~~~-----~~~------~~~~~vi~~~~~~~~~~~~------------------------------~--~~~~~ 179 (348)
T cd03820 143 TEEDRALYY-----KKF------NKNVVVIPNPLPFPPEEPS------------------------------S--DLKSK 179 (348)
T ss_pred CHHHHHHhh-----ccC------CCCeEEecCCcChhhcccc------------------------------C--CCCCc
Confidence 999973222 111 2389999999998765432 0 12457
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
.++|+|++.+.||++.++++++.+.+ ++++|+|+|.+. ....++++..+.+ .++.+.+. .+++..+++.||+
T Consensus 180 ~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~ 255 (348)
T cd03820 180 RILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP--EREALEALIKELGLEDRVILLGF--TKNIEEYYAKASI 255 (348)
T ss_pred EEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC--CHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCE
Confidence 99999999999999999999999974 789999999987 3445555555443 34555444 4667789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 559 (612)
+++||.+|++|++++|||++|+|||+++.+ +..+++.++.+|+++ ++.|+++++++|.+++++ ++.+
T Consensus 256 ~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~~i~~ll~~--~~~~ 323 (348)
T cd03820 256 FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLV----------PNGDVEALAEALLRLMED--EELR 323 (348)
T ss_pred EEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEe----------CCCCHHHHHHHHHHHHcC--HHHH
Confidence 999999999999999999999999999975 556777777799976 999999999999999998 6777
Q ss_pred HHHHHHH--HHhhcCcHHHHHHHHH
Q 007212 560 AEMMKNG--MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 560 ~~~~~~~--~~~~fsw~~~a~~~~~ 582 (612)
+++++++ +.++|+|+.++++|.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (348)
T cd03820 324 KRMGANARESAERFSIENIIKQWEE 348 (348)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHhcC
Confidence 7777776 5788999999999863
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=282.59 Aligned_cols=218 Identities=17% Similarity=0.136 Sum_probs=173.7
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+++..++.+|.++++|+..++.+.+. ++. . .++.+|+||+|.+.+.+...
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~--~~~-~------~~~~vi~~gvd~~~~~~~~~--------------------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSL--WKR-N------TKPSIVYPPCDVEELLKLPL--------------------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHH--hCc-C------CCcEEEcCCCCHHHhccccc---------------------
Confidence 45677889999999999999998862 111 1 27899999999877754321
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C-----CeEEEEEecCCh----hHHHHHHHHHHHC--
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-----NVQIIVLGTGKK----PMEKQLEQLEILY-- 456 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~-----~~~lvivG~g~~----~~~~~l~~l~~~~-- 456 (612)
...++.++|+|+||+++.||++.+++|++++.+ + +++|+|+|++.. .+.+.+++++.++
T Consensus 232 --------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l 303 (419)
T cd03806 232 --------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGL 303 (419)
T ss_pred --------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Confidence 001244799999999999999999999999875 2 599999998742 3567777777665
Q ss_pred CCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCc-cccee---cCcceEEeccccccc
Q 007212 457 PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL-VDTVE---EGFTGFQMGSFSVDC 532 (612)
Q Consensus 457 ~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~-~e~v~---~g~~G~~~~~~~~~~ 532 (612)
.++|.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|||+++.||. .|++. ++.+|+++
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~------- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA------- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe-------
Confidence 35788998888888999999999999999999999999999999999999999775 57887 78999975
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHH
Q 007212 533 EAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAK 578 (612)
Q Consensus 533 ~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~ 578 (612)
.|+++++++|.++++++ ...++.+.+++ ..++|||+...+
T Consensus 377 -----~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 377 -----STAEEYAEAIEKILSLS-EEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred -----CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 49999999999999973 23333333332 568899998653
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=294.05 Aligned_cols=287 Identities=18% Similarity=0.229 Sum_probs=217.0
Q ss_pred CCCcEEEEeCCCc-ccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCC
Q 007212 227 GKKNVVFVANDWH-TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 305 (612)
Q Consensus 227 ~~pDvVi~~h~~~-~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (612)
.++|+ +|+|... .++++..++.. .++|+|++.|++....+.. .+....+. ....+..+.
T Consensus 172 ~~~dv-iH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~~~e~~~--~~~~~~~~----------~~~~~~~~~ 231 (475)
T cd03813 172 PKADV-YHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIYTRERKI--ELLQADWE----------MSYFRRLWI 231 (475)
T ss_pred CCCCE-EeccCcchHHHHHHHHHHH-------hCCCEEEecCCccHHHHHH--HHHhcccc----------hHHHHHHHH
Confidence 46895 9999633 33444444444 4899999999764321100 00000000 000000111
Q ss_pred chh-HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhcc
Q 007212 306 RKI-NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 306 ~~~-~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
+.+ .+.+..++.||.|+++|+..++.+.+ +|.+.+ ++.+||||+|.+.|.+....
T Consensus 232 ~~~~~l~~~~~~~ad~Ii~~s~~~~~~~~~---~g~~~~------ki~vIpNgid~~~f~~~~~~--------------- 287 (475)
T cd03813 232 RFFESLGRLAYQAADRITTLYEGNRERQIE---DGADPE------KIRVIPNGIDPERFAPARRA--------------- 287 (475)
T ss_pred HHHHHHHHHHHHhCCEEEecCHHHHHHHHH---cCCCHH------HeEEeCCCcCHHHcCCcccc---------------
Confidence 111 23466788999999999999887765 676655 89999999999888765310
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCC--hhHHHHHHHHHHHCC--C
Q 007212 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK--KPMEKQLEQLEILYP--E 458 (612)
Q Consensus 385 ~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~--~~~~~~l~~l~~~~~--~ 458 (612)
.. ..+.++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+++ +.+.+.++++..+++ +
T Consensus 288 -----------~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~ 354 (475)
T cd03813 288 -----------RP--EKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLED 354 (475)
T ss_pred -----------cc--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCC
Confidence 01 1245899999999999999999999999875 799999999984 467778888877654 5
Q ss_pred ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec------CcceEEeccccccc
Q 007212 459 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDC 532 (612)
Q Consensus 459 ~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------g~~G~~~~~~~~~~ 532 (612)
++.+.+ .+.+..+++.+|++++||..|++|++++|||+||+|||+|+.|+..|++.+ |.+|+++
T Consensus 355 ~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv------- 424 (475)
T cd03813 355 NVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV------- 424 (475)
T ss_pred eEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE-------
Confidence 677777 344567999999999999999999999999999999999999999999998 6689976
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHH
Q 007212 533 EAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 533 ~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~ 585 (612)
++.|+++++++|.+++++ ++.+.++++++ +.+.|+|+.++++|.++|+
T Consensus 425 ---~~~d~~~la~ai~~ll~~--~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 425 ---PPADPEALARAILRLLKD--PELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ---CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999998 66677777766 5788999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-30 Score=268.65 Aligned_cols=352 Identities=20% Similarity=0.219 Sum_probs=245.9
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+.. .||...++..|+++|.++||+|+++++...... .....|++.+
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~~~~~~~~~ 51 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE-----------------------ELEALGVKVI 51 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc-----------------------ccccCCceEE
Confidence 68999976 588899999999999999999999997633211 0112345554
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+....... ...+.........+.++.. +||+ +|+|.+....+..
T Consensus 52 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~-------------~~dv-v~~~~~~~~~~~~ 96 (359)
T cd03808 52 PIPLDRRGI---------------------NPFKDLKALLRLYRLLRKE-------------RPDI-VHTHTPKPGILGR 96 (359)
T ss_pred ecccccccc---------------------ChHhHHHHHHHHHHHHHhc-------------CCCE-EEEccccchhHHH
Confidence 442211000 0001111112233333332 4895 8888766666655
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
..+... ...++++++|+..+...... . .........+..+..+|.++++|
T Consensus 97 ~~~~~~------~~~~~i~~~~~~~~~~~~~~-----------~-------------~~~~~~~~~~~~~~~~d~ii~~s 146 (359)
T cd03808 97 LAARLA------GVPKVIYTVHGLGFVFTSGG-----------L-------------KRRLYLLLERLALRFTDKVIFQN 146 (359)
T ss_pred HHHHHc------CCCCEEEEecCcchhhccch-----------h-------------HHHHHHHHHHHHHhhccEEEEcC
Confidence 555422 46788888886543211000 0 00011233466778899999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+ .+... ...++.+++||+|...+.+... . . ..+.++
T Consensus 147 ~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~--------------------~-------~--~~~~~~ 190 (359)
T cd03808 147 EDDRDLALK---LGIIK----KKKTVLIPGSGVDLDRFSPSPE--------------------P-------I--PEDDPV 190 (359)
T ss_pred HHHHHHHHH---hcCCC----cCceEEecCCCCChhhcCcccc--------------------c-------c--CCCCcE
Confidence 999999986 23211 0227788899999887765421 0 1 124589
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHH-HCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-LYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~-~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
|+|+|++.+.||++.++++++.+.+ ++++|+|+|.+..........+.. ....++.+.+. .+++..+++.||+++
T Consensus 191 i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i 268 (359)
T cd03808 191 FLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGF--RDDVPELLAAADVFV 268 (359)
T ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeec--cccHHHHHHhccEEE
Confidence 9999999999999999999999874 789999999987432222111111 12345766665 445668999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 562 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 562 (612)
+||..|++|++++|||++|+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++.+ ++.+.++
T Consensus 269 ~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~ 336 (359)
T cd03808 269 LPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLV----------PPGDAEALADAIERLIED--PELRARM 336 (359)
T ss_pred ecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEE----------CCCCHHHHHHHHHHHHhC--HHHHHHH
Confidence 9999999999999999999999999999999999999999987 899999999999999988 6667777
Q ss_pred HHHH---HHhhcCcHHHHHHHH
Q 007212 563 MKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 563 ~~~~---~~~~fsw~~~a~~~~ 581 (612)
++++ +.++|||+.++++|+
T Consensus 337 ~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 337 GQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHHhcCHHHHHHHhh
Confidence 6666 478999999999886
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=277.03 Aligned_cols=222 Identities=12% Similarity=0.155 Sum_probs=173.6
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHH--hCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE--VGLP 398 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~gl~ 398 (612)
++++|...++.+.+. ++++.+ ++.+||||+|+..|.|.... ....++. .+++
T Consensus 342 ~v~~s~~v~~~l~~~--lgip~~------KI~VIyNGVD~~rf~p~~~~------------------~~~~r~~~~~~l~ 395 (578)
T PRK15490 342 FMSNNHCVTRHYADW--LKLEAK------HFQVVYNGVLPPSTEPSSEV------------------PHKIWQQFTQKTQ 395 (578)
T ss_pred hhhccHHHHHHHHHH--hCCCHH------HEEEEeCCcchhhcCccchh------------------hHHHHHHhhhccC
Confidence 667888878877642 466655 99999999999988775321 1122222 3344
Q ss_pred CCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHH
Q 007212 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMI 474 (612)
Q Consensus 399 ~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i 474 (612)
. +.++|+++||+.++||.+.+++++.++.+ ++++|+|+|+|+ .++.+++++.+++ +++.+.+. .+++..+
T Consensus 396 ~--~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~--~~eeLk~la~elgL~d~V~FlG~--~~Dv~~~ 469 (578)
T PRK15490 396 D--ADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD--LRAEAQKRAEQLGILERILFVGA--SRDVGYW 469 (578)
T ss_pred C--CCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch--hHHHHHHHHHHcCCCCcEEECCC--hhhHHHH
Confidence 2 34799999999999999999999988755 689999999997 5667777776654 56777665 3456689
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHH---HH
Q 007212 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR---AL 551 (612)
Q Consensus 475 ~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~---ll 551 (612)
|+.+|++|+||.+|+||++++|||+||+|||+|+.||..|+|.++.+|+++ ++.|++++++.+.. +.
T Consensus 470 LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LV----------p~~D~~aLa~ai~lA~aL~ 539 (578)
T PRK15490 470 LQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFIL----------DDAQTVNLDQACRYAEKLV 539 (578)
T ss_pred HHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEE----------CCCChhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999987 88998888887643 33
Q ss_pred HhhCHHHHHHHHHH---HHHhhcCcHHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKN---GMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 552 ~~~~~~~~~~~~~~---~~~~~fsw~~~a~~~~~~y~~ 586 (612)
+. ......++++ .+.++|||+.++++|+++|.+
T Consensus 540 ~l--l~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 540 NL--WRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HH--HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 33 2223334444 467899999999999999974
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=273.05 Aligned_cols=440 Identities=17% Similarity=0.211 Sum_probs=259.4
Q ss_pred ccccHHHHhhchHHHHHhC-CCeEEEEEecCCccc-cccCccEEEE--E-----EeCCeeeEEEEEEeeecCceEE-EEe
Q 007212 99 KTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQYK-DAWDTDVVIE--L-----KVGDKIEKVRFFHCHKRGVDRV-FVD 168 (612)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~~~~~~-~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~gv~~~-~v~ 168 (612)
|.||+-+++..=|+.+++. |-+..++.|...+.. ...+...... + ......-.+++-+..++|-+++ .+|
T Consensus 14 KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~i~G~P~viL~D 93 (590)
T cd03793 14 KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALDRMRSRGIKVHFGRWLIEGYPKVVLFD 93 (590)
T ss_pred cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHHHHHhCCCeEEEeEEEcCCCCeEEEEe
Confidence 6899999998888888764 888888888754211 1110000000 0 0011123456666777777666 445
Q ss_pred Ccccc-------ccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhh-ccCCCCccCCCCCCCcEEEEeCCCcc
Q 007212 169 HPWFL-------AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL-NLNSNKYFSGPYGKKNVVFVANDWHT 240 (612)
Q Consensus 169 ~~~~~-------~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~pDvVi~~h~~~~ 240 (612)
...++ ...|-..+ +=.+..+.||.+.. -|...+...++.+... .. +++| |+|+|||++
T Consensus 94 ~~~~~~~~~~~~~~lW~~~~--i~s~~~~~d~nea~-~fgy~~~~~i~~~~~~~~~----------~~~d-ViH~HeWm~ 159 (590)
T cd03793 94 IGSAAWKLDEWKGELWELCG--IGSPEGDRETNDAI-IFGFLVAWFLGEFAEQFDD----------EPAV-VAHFHEWQA 159 (590)
T ss_pred CchhhhhHHHHHHHHHHHcC--CCCCCCCCcchHHH-HHHHHHHHHHHHHHhhccC----------CCCe-EEEEcchhH
Confidence 44333 22553222 11222334554443 2444443333333222 11 3578 599999999
Q ss_pred cchHHHHHhhhcCCCCcCCceEEEEEecCCccccc-CcccccccCCCcccccccccccCCC---CCcCCchhHHHHHHHh
Q 007212 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYN---KPVRGRKINWMKAGIL 316 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~k~~l~ 316 (612)
+....+++... .++|+|+|+|.+.. ||. +... ..+...++..++-. +.-...+...++.+..
T Consensus 160 g~a~~~lK~~~------~~VptVfTtHAT~~-GR~l~~g~-------~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 160 GVGLPLLRKRK------VDVSTIFTTHATLL-GRYLCAGN-------VDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred hHHHHHHHHhC------CCCCEEEEeccccc-ccccccCC-------cccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 99999999632 58899999998776 553 1110 00111111011000 0001123345778889
Q ss_pred hCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhh-hcc----HHHHHHH
Q 007212 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM-DAK----PLLKEAL 391 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~-~~~----~~~~~~l 391 (612)
.||.++|||+.++.++.. .++.+++ + |||||+|+..|.+..+. ++.. .++ ...+..+
T Consensus 226 ~Ad~fttVS~it~~E~~~--Ll~~~pd------~--ViPNGid~~~f~~~~e~--------~~~~~~~k~ki~~f~~~~~ 287 (590)
T cd03793 226 CAHVFTTVSEITAYEAEH--LLKRKPD------V--VLPNGLNVKKFSALHEF--------QNLHAQSKEKINEFVRGHF 287 (590)
T ss_pred hCCEEEECChHHHHHHHH--HhCCCCC------E--EeCCCcchhhcccchhh--------hhhhHHhhhhhhHHHHHHH
Confidence 999999999999999996 3677655 3 99999999998765321 0000 011 1112335
Q ss_pred HHHhCCCCCCCCcEEEE-EccCcc-ccCHHHHHHHHHhccc------CC---eEEEEEecC-----------C---hhHH
Q 007212 392 QAEVGLPVDRNIPVIGF-IGRLEE-QKGSDILAAAIPHFIK------EN---VQIIVLGTG-----------K---KPME 446 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~-iGrl~~-~Kg~d~li~A~~~l~~------~~---~~lvivG~g-----------~---~~~~ 446 (612)
+..++++. ++++++| +||++. +||+|.+|+|++++.. .+ +-|+|+=.+ . +.+.
T Consensus 288 ~~~~~~~~--d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~ 365 (590)
T cd03793 288 YGHYDFDL--DKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLR 365 (590)
T ss_pred hhhcCCCC--CCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHH
Confidence 66667654 3367777 799998 9999999999999854 22 223333221 0 1112
Q ss_pred HHHHHHH-------------------------------------------------------------------HHC---
Q 007212 447 KQLEQLE-------------------------------------------------------------------ILY--- 456 (612)
Q Consensus 447 ~~l~~l~-------------------------------------------------------------------~~~--- 456 (612)
+.++++. .-+
T Consensus 366 ~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~ 445 (590)
T cd03793 366 DTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPE 445 (590)
T ss_pred HHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCC
Confidence 2222210 000
Q ss_pred -CCceEEEeccC-------hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCc----ccceecC-cceE
Q 007212 457 -PEKARGVAKFN-------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTVEEG-FTGF 523 (612)
Q Consensus 457 -~~~v~~~~~~~-------~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~v~~g-~~G~ 523 (612)
..++.+++.|. +....+++++||++|+||.+||||++++|||+||+|+|+|+.+|+ .|++.++ ..|+
T Consensus 446 drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi 525 (590)
T cd03793 446 DRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGI 525 (590)
T ss_pred CeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceE
Confidence 01455555551 122446899999999999999999999999999999999999998 4555444 3566
Q ss_pred EecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH-HHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 524 QMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 524 ~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~-~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
.+-+.+. .-.+.++++++++|.++++....+.....+. +..++.|+|++.++.|.+.|+.++.
T Consensus 526 ~V~~r~~---~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 526 YIVDRRF---KSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred EEecCCc---cchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 5411000 0014668889999988885421122222222 1257889999999999999998764
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=271.47 Aligned_cols=222 Identities=16% Similarity=0.134 Sum_probs=169.7
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+++..++.+|.++++|+..++.+.+. .+... .++.+||||+|.+.|.|....
T Consensus 164 ~~e~~~~~~ad~vi~~S~~~~~~l~~~--~~~~~------~~v~vipngvd~~~f~~~~~~------------------- 216 (397)
T TIGR03087 164 AYERAIAARFDAATFVSRAEAELFRRL--APEAA------GRITAFPNGVDADFFSPDRDY------------------- 216 (397)
T ss_pred HHHHHHHhhCCeEEEcCHHHHHHHHHh--CCCCC------CCeEEeecccchhhcCCCccc-------------------
Confidence 345778889999999999999998752 12222 289999999999988764310
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHH----HHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAA----AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~----A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
...++ .+.++|+|+||+.+.||++.+++ +++.+.+ ++++|+|+|+|+. +.++++... .++.+
T Consensus 217 -----~~~~~--~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~~--~~V~~ 284 (397)
T TIGR03087 217 -----PNPYP--PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAAL--PGVTV 284 (397)
T ss_pred -----cCCCC--CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhccC--CCeEE
Confidence 00111 23478999999999999999884 4555543 7899999999873 235555433 34777
Q ss_pred EeccChHHHHHHHHhccEEEEcCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHH
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~ 541 (612)
.+..+ ++..+++.||++|+||+. ||+|++++|||+||+|||+|+.++ ..+..++.+|+++ + +|++
T Consensus 285 ~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~-~~i~~~~~~g~lv----------~-~~~~ 350 (397)
T TIGR03087 285 TGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAA-EGIDALPGAELLV----------A-ADPA 350 (397)
T ss_pred eeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCccc-ccccccCCcceEe----------C-CCHH
Confidence 77665 356799999999999985 999999999999999999999754 2333344578864 5 8999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHH
Q 007212 542 AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 542 ~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~ 585 (612)
+++++|.+++++ ++.+.+|++++ +.++|||+..+++++++|.
T Consensus 351 ~la~ai~~ll~~--~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 351 DFAAAILALLAN--PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999998 66677777776 4689999999999999875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-28 Score=252.69 Aligned_cols=334 Identities=22% Similarity=0.244 Sum_probs=224.8
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+. .||.+.++..|+++|.+.||+|.+++............... . .....
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~------------~-------~~~~~ 57 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNV------------K-------LIPVR 57 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccch------------h-------hhcee
Confidence 7899998753 59999999999999999999999999764322211000000 0 00000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCC-cccchH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDW-HTSLIP 244 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~-~~~~~~ 244 (612)
..... .+ ..........+.++.. +||+ +++|.+ ...++.
T Consensus 58 ~~~~~-------------~~-------------~~~~~~~~~~~~~~~~-------------~~di-i~~~~~~~~~~~~ 97 (353)
T cd03811 58 VLKLK-------------SL-------------RDLLAILRLRRLLRKE-------------KPDV-VISHLTTTPNVLA 97 (353)
T ss_pred eeecc-------------cc-------------cchhHHHHHHHHHHhc-------------CCCE-EEEcCccchhHHH
Confidence 00000 00 0001222333334433 4896 788766 222222
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
.+.. . .+.|+++++|+......... .......+..+..+|.++++
T Consensus 98 ~~~~-~-------~~~~~i~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~d~ii~~ 142 (353)
T cd03811 98 LLAA-R-------LGTKLIVWEHNSLSLELKRK---------------------------LRLLLLIRKLYRRADKIVAV 142 (353)
T ss_pred HHHh-h-------cCCceEEEEcCcchhhhccc---------------------------hhHHHHHHhhccccceEEEe
Confidence 2222 1 26899999997654221100 00002456678899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+.+. ++... .++.+||||+|...+.+...+ .. ..+.+ .+.+
T Consensus 143 s~~~~~~~~~~--~~~~~------~~~~vi~~~~~~~~~~~~~~~-------------------~~---~~~~~--~~~~ 190 (353)
T cd03811 143 SEGVKEDLLKL--LGIPP------DKIEVIYNPIDIEEIRALAEE-------------------PL---ELGIP--PDGP 190 (353)
T ss_pred ccchhhhHHHh--hcCCc------cccEEecCCcChhhcCcccch-------------------hh---hcCCC--CCce
Confidence 99999998862 23212 289999999998887654321 00 12222 3558
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
+|+|+||+.+.||++.++++++.+.+ ++++|+++|.++ ..+.++++..+++ +++.+.+.. +.+..+++.||+
T Consensus 191 ~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~ 266 (353)
T cd03811 191 VILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP--LREELEALAKELGLADRVHFLGFQ--SNPYPYLKAADL 266 (353)
T ss_pred EEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCc--cHHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCE
Confidence 99999999999999999999999976 589999999887 3444445544433 456666553 335679999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHH---HHHHHHHHhhCHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYGTQ 557 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la---~~i~~ll~~~~~~ 557 (612)
+++||.+|++|++++|||++|+|||+++.||..|++.++.+|+++ ++.|.++++ +.+..+.++ ++
T Consensus 267 ~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~~~~~~~i~~~~~~--~~ 334 (353)
T cd03811 267 FVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLV----------PVGDEAALAAAALALLDLLLD--PE 334 (353)
T ss_pred EEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEE----------CCCCHHHHHHHHHHHHhccCC--hH
Confidence 999999999999999999999999999999999999999999987 899999994 555555544 45
Q ss_pred HHHHHHHH
Q 007212 558 ALAEMMKN 565 (612)
Q Consensus 558 ~~~~~~~~ 565 (612)
.+.+++.+
T Consensus 335 ~~~~~~~~ 342 (353)
T cd03811 335 LRERLAAA 342 (353)
T ss_pred HHHHHHHH
Confidence 56666653
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-28 Score=257.80 Aligned_cols=205 Identities=20% Similarity=0.253 Sum_probs=170.8
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+.+..++.+|.++++|+..++.+.+. ++ .+..+|+||+|.+.|.+..
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~~~~~--~~---------~~~~vi~~~~d~~~~~~~~---------------------- 192 (351)
T cd03804 146 WDRRSAARVDYFIANSRFVARRIKKY--YG---------RDATVIYPPVDTDRFTPAE---------------------- 192 (351)
T ss_pred HHHHHhcCCCEEEECCHHHHHHHHHH--hC---------CCcEEECCCCCHhhcCcCC----------------------
Confidence 44666789999999999999999752 22 1567899999988876542
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChH
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 469 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 469 (612)
...+.++|+||+.+.||++.+++|+.++ + ++|+|+|+|+ ..+.+++ ...+++.+.+..+.+
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~--~-~~l~ivG~g~--~~~~l~~---~~~~~V~~~g~~~~~ 253 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKL--G-KRLVVIGDGP--ELDRLRA---KAGPNVTFLGRVSDE 253 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHC--C-CcEEEEECCh--hHHHHHh---hcCCCEEEecCCCHH
Confidence 1235799999999999999999999998 2 8999999987 3444444 345679999999999
Q ss_pred HHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 470 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 470 ~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
++..+++.||++++||. |+||++++|||+||+|||+++.||..|++.++.+|+++ ++.|+++++++|.+
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~----------~~~~~~~la~~i~~ 322 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILF----------EEQTVESLAAAVER 322 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEe----------CCCCHHHHHHHHHH
Confidence 89999999999999999 99999999999999999999999999999999999976 99999999999999
Q ss_pred HHHhhCHHHHHHHHHHHHHhhcCcHHHHHHH
Q 007212 550 ALATYGTQALAEMMKNGMAQDLSWKGPAKKW 580 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~ 580 (612)
+++++. ...+++.++ .+.|+|++..+++
T Consensus 323 l~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 350 (351)
T cd03804 323 FEKNED-FDPQAIRAH--AERFSESRFREKI 350 (351)
T ss_pred HHhCcc-cCHHHHHHH--HHhcCHHHHHHHh
Confidence 999842 333444443 3679999998875
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=266.41 Aligned_cols=208 Identities=16% Similarity=0.124 Sum_probs=160.0
Q ss_pred CCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCC
Q 007212 318 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 318 ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl 397 (612)
||.|+++|.... .+.. . .|. ..||||++.|.|... ...++++|+
T Consensus 499 cD~VIaPS~atq-~L~~---~-----------vI~-nVnGVDte~F~P~~r--------------------~~~~r~lgi 542 (794)
T PLN02501 499 CHKVLRLSAATQ-DLPK---S-----------VIC-NVHGVNPKFLKIGEK--------------------VAEERELGQ 542 (794)
T ss_pred CCEEEcCCHHHH-Hhcc---c-----------cee-ecccccccccCCcch--------------------hHHHHhcCC
Confidence 899999997766 3321 1 222 237999999988742 122255666
Q ss_pred CCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007212 398 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 398 ~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 475 (612)
+... ..++|+|||.++||++.|++|++.+.+ ++++|+|+|+|+ .++.+++++.+++..+.+.+..+ ....+|
T Consensus 543 ~~~~--kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP--~reeLe~la~eLgL~V~FLG~~d--d~~~ly 616 (794)
T PLN02501 543 QAFS--KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE--DAHEVQRAAKRLDLNLNFLKGRD--HADDSL 616 (794)
T ss_pred cccc--CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc--cHHHHHHHHHHcCCEEEecCCCC--CHHHHH
Confidence 5433 458999999999999999999998865 589999999998 56677777776664455554432 233689
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007212 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 555 (612)
+.+|+||+||..|+||++++||||||+|||+++.+|. +++.++.+|++ ..|+++++++|.++++++
T Consensus 617 asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll------------~~D~EafAeAI~~LLsd~- 682 (794)
T PLN02501 617 HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLT------------YKTSEDFVAKVKEALANE- 682 (794)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEe------------cCCHHHHHHHHHHHHhCc-
Confidence 9999999999999999999999999999999999985 55777888884 389999999999999983
Q ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 556 TQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 556 ~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+....+.. ...|||+..++++++.-+
T Consensus 683 -~~rl~~~a---~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 683 -PQPLTPEQ---RYNLSWEAATQRFMEYSD 708 (794)
T ss_pred -hhhhHHHH---HhhCCHHHHHHHHHHhhc
Confidence 32222222 458999999999998654
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=246.81 Aligned_cols=225 Identities=16% Similarity=0.225 Sum_probs=170.7
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
++..+.+.+.+.++++|+..++.+.+ .|++. .+ +|+||+|.+.|.|.... .
T Consensus 84 ~~y~~~m~~~~~vIavS~~t~~~L~~---~G~~~-------~i-~I~~GVD~~~f~p~~~~------------------~ 134 (335)
T PHA01633 84 EIVNKYLLQDVKFIPNSKFSAENLQE---VGLQV-------DL-PVFHGINFKIVENAEKL------------------V 134 (335)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHH---hCCCC-------ce-eeeCCCChhhcCccchh------------------h
Confidence 34556677788999999999999986 56542 23 47899999988775321 2
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
..++++++.... +.++|+++||+.++||++.+++|++.+.+ + +++++++|.+ .++++ ..++++.+
T Consensus 135 ~~~r~~~~~~~~-~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l--~l~~~V~f 205 (335)
T PHA01633 135 PQLKQKLDKDFP-DTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQL--EVPANVHF 205 (335)
T ss_pred HHHHHHhCcCCC-CCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHc--CCCCcEEE
Confidence 445666664322 44799999999999999999999999865 3 4688888742 23333 24556877
Q ss_pred Eecc---ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec------------------Ccc
Q 007212 463 VAKF---NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------------------GFT 521 (612)
Q Consensus 463 ~~~~---~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------------------g~~ 521 (612)
.+.+ +.+++..+|++||++|+||.+|+||++++|||+||+|||+++.+|+.|++.+ ..+
T Consensus 206 ~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~ 285 (335)
T PHA01633 206 VAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQ 285 (335)
T ss_pred EecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCc
Confidence 7533 5677889999999999999999999999999999999999999999997542 223
Q ss_pred eEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHH
Q 007212 522 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 582 (612)
Q Consensus 522 G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~ 582 (612)
||.+ +..|+++|+++|.++++...++.+ .+.....++.|+|+.+.++|++
T Consensus 286 g~~~----------~~~d~~~la~ai~~~~~~~~~~~~-~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 286 KWKI----------HKFQIEDMANAIILAFELQDREER-SMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeee----------cCCCHHHHHHHHHHHHhccChhhh-hHHHHHHHHhcCHHHHHHHhhC
Confidence 5544 889999999999999776433333 2223346899999999999974
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=267.54 Aligned_cols=224 Identities=17% Similarity=0.115 Sum_probs=174.3
Q ss_pred HHhhCCEEEecCHHHHHHHHcCc-CCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGE-DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~-~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
....+|.++++|+..++.+.+.. .++... .++.+||||++...+.|..
T Consensus 267 ~~~~~D~iI~~S~~~~~~l~~~~~~~~~~~------~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 267 NADYIDFFITATDIQNQILKNQFKKYYNIE------PRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred chhhCCEEEECCHHHHHHHHHHhhhhcCCC------CcEEEEcCCCcccccCccc-------------------------
Confidence 35678999999999888877521 122211 2899999998754433321
Q ss_pred HHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccCh
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNI 468 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~ 468 (612)
.++...|+|+||+.+.||++.+++|+..+.+ ++++|+|+|.|+ ..+.++++..+++ +.+.+.+..
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~--~~~~l~~~i~~~~l~~~V~f~G~~-- 384 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGG--EKQKLQKIINENQAQDYIHLKGHR-- 384 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECch--hHHHHHHHHHHcCCCCeEEEcCCC--
Confidence 1234689999999999999999999999865 799999999998 4567777776653 456666632
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCcceEEecc-cccccccCCCCC-HHHHHH
Q 007212 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGS-FSVDCEAVDPVD-VAAVST 545 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~-~~~~~~~v~~~d-~~~la~ 545 (612)
.+..+++.||++|+||..|+||++++|||+||+|||+++.+ |.+|+|.+|.+|+++.. +..+ ++.| +++|++
T Consensus 385 -~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~----d~~~~~~~la~ 459 (500)
T TIGR02918 385 -NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEED----DEDQIITALAE 459 (500)
T ss_pred -CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcccc----chhHHHHHHHH
Confidence 34578999999999999999999999999999999999986 89999999999998720 0000 1223 899999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l 587 (612)
+|.++++ ++.+.+|++++ .+++|||+.++++|+++++++
T Consensus 460 ~I~~ll~---~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 460 KIVEYFN---SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHhC---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999994 34577787777 468999999999999998764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-28 Score=254.18 Aligned_cols=231 Identities=14% Similarity=0.147 Sum_probs=172.7
Q ss_pred HHHHHH-HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHH
Q 007212 309 NWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 309 ~~~k~~-l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
.++... .+.+|.++++|+..++.+.+ .|... ..++.+||||+|.+.|.|....
T Consensus 85 ~~~~~~~~~~ad~ii~~S~~~~~~l~~---~g~~~-----~~~i~vIpNGVd~~~f~~~~~~------------------ 138 (331)
T PHA01630 85 TALYFFRNQPVDEIVVPSQWSKNAFYT---SGLKI-----PQPIYVIPHNLNPRMFEYKPKE------------------ 138 (331)
T ss_pred HHHHHHhhccCCEEEECCHHHHHHHHH---cCCCC-----CCCEEEECCCCCHHHcCCCccc------------------
Confidence 345555 67899999999999999976 44331 1289999999999888654210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEec
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 465 (612)
..+.+++++.|++.++||++.|++|++.+.+ ++++++|+|++..+ ..+. ...+ ..+.
T Consensus 139 ------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~--~~l~----~~~~---~~~~ 197 (331)
T PHA01630 139 ------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD--PRLF----GLNG---VKTP 197 (331)
T ss_pred ------------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc--hhhc----cccc---eecc
Confidence 1133677888899999999999999999975 68999999976522 1111 1111 1233
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccc---------cccccCC
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFS---------VDCEAVD 536 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~---------~~~~~v~ 536 (612)
.+.+++..+|+.||++++||++|+||++++||||||+|||+|+.||+.|++.++.+|+++.... .+|=.+-
T Consensus 198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v 277 (331)
T PHA01630 198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL 277 (331)
T ss_pred CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccccc
Confidence 4667888999999999999999999999999999999999999999999999999998763110 0111122
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHH-HHHH--HHhhcCcHHHHHHHHHHHHH
Q 007212 537 PVDVAAVSTTVRRALATYGTQALAEM-MKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 537 ~~d~~~la~~i~~ll~~~~~~~~~~~-~~~~--~~~~fsw~~~a~~~~~~y~~ 586 (612)
+.|.+++++.+.+++.+++++.+.++ ..++ ..++|||+.++++|+++|++
T Consensus 278 ~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 278 DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 34788899999999987433333433 3333 57999999999999999974
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=256.15 Aligned_cols=220 Identities=14% Similarity=0.130 Sum_probs=180.9
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+.+..++.+|.++++|+..++.+.+. ++...+ ++.+++||+|...+.+..
T Consensus 175 ~~~~~~~~~~d~ii~~S~~~~~~l~~~--~~~~~~------ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 175 PLRRYLLSSLDAVFPCSEQGRNYLQKR--YPAYKE------KIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHH--CCCccc------cEEEEECCcccccccCCC---------------------
Confidence 344556889999999999999998853 444433 889999999987654321
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C--CeEEEEEecCChhHHHHHHHHHHHC--CCceEE
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGTGKKPMEKQLEQLEILY--PEKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~--~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~ 462 (612)
..++.+.|+++||+.+.||++.+++|+.++.+ + +++++++|+|+ ..+.+++++... .+++.+
T Consensus 226 ----------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--~~~~l~~~~~~~~~~~~V~f 293 (407)
T cd04946 226 ----------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--LEDTLKELAESKPENISVNF 293 (407)
T ss_pred ----------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--HHHHHHHHHHhcCCCceEEE
Confidence 11245799999999999999999999999976 2 57788899987 556677776543 346888
Q ss_pred EeccChHHHHHHHHh--ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCC-CC
Q 007212 463 VAKFNIPLAHMIIAG--ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP-VD 539 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~--aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~-~d 539 (612)
.+..+.+++..+++. +|+++.||..|++|++++|||++|+|||+|+.||..|++.++.+|+++ ++ .|
T Consensus 294 ~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~----------~~~~~ 363 (407)
T cd04946 294 TGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL----------SKDPT 363 (407)
T ss_pred ecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe----------CCCCC
Confidence 888888888788864 789999999999999999999999999999999999999999999986 55 58
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHH
Q 007212 540 VAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 540 ~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~ 581 (612)
+++++++|.+++++ ++.+.+|++++ +.++|||+...++|.
T Consensus 364 ~~~la~~I~~ll~~--~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 364 PNELVSSLSKFIDN--EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999999999997 66777777777 579999999998875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-26 Score=245.75 Aligned_cols=190 Identities=12% Similarity=0.065 Sum_probs=149.3
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+++..++.+|.++++|+.+++.+.+. +|+ ++.+|+||. .+.|.|....
T Consensus 158 ~e~~~~~~ad~ii~~S~~~~~~l~~~--~g~---------~i~vi~n~~-~~~f~~~~~~-------------------- 205 (371)
T PLN02275 158 YERHYGKMADGHLCVTKAMQHELDQN--WGI---------RATVLYDQP-PEFFRPASLE-------------------- 205 (371)
T ss_pred HHHHHHhhCCEEEECCHHHHHHHHHh--cCC---------CeEEECCCC-HHHcCcCCch--------------------
Confidence 34667888999999999999998751 232 378999984 4666554210
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcc-------------------cCCeEEEEEecCChhHHHHHH
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-------------------KENVQIIVLGTGKKPMEKQLE 450 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~-------------------~~~~~lvivG~g~~~~~~~l~ 450 (612)
. .+.. +...+++++||+.++||++.+++|+..+. .++++|+|+|+|+ ..+.++
T Consensus 206 ---~--~~~~-~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~--~~~~l~ 277 (371)
T PLN02275 206 ---I--RLRP-NRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP--QKAMYE 277 (371)
T ss_pred ---h--cccC-CCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC--CHHHHH
Confidence 0 0111 12357889999999999999999998872 2689999999998 556676
Q ss_pred HHHHHCC-CceEEEec-cChHHHHHHHHhccEEEEcCC---CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEe
Q 007212 451 QLEILYP-EKARGVAK-FNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 525 (612)
Q Consensus 451 ~l~~~~~-~~v~~~~~-~~~~~~~~i~~~aDv~v~pS~---~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~ 525 (612)
++..+.+ .++.+++. .+.++++.+|+.||++++|+. .|++|++++||||||+|||+++.||..|+|.++.+|+++
T Consensus 278 ~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv 357 (371)
T PLN02275 278 EKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLF 357 (371)
T ss_pred HHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEE
Confidence 7666554 34777665 577888899999999998642 388999999999999999999999999999999999986
Q ss_pred cccccccccCCCCCHHHHHHHHHHHH
Q 007212 526 GSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 526 ~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
+ |+++|+++|.+++
T Consensus 358 ----------~--~~~~la~~i~~l~ 371 (371)
T PLN02275 358 ----------S--SSSELADQLLELL 371 (371)
T ss_pred ----------C--CHHHHHHHHHHhC
Confidence 4 6999999998764
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-26 Score=241.92 Aligned_cols=215 Identities=20% Similarity=0.210 Sum_probs=174.4
Q ss_pred HHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHH
Q 007212 311 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 311 ~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (612)
+...+..+|.++++|+..++.+.+. ++.. .++.+||||++...+.+...
T Consensus 151 ~~~~~~~~d~ii~~s~~~~~~l~~~--~~~~-------~~v~~ip~g~~~~~~~~~~~---------------------- 199 (372)
T cd04949 151 VFENLDKVDGVIVATEQQKQDLQKQ--FGNY-------NPIYTIPVGSIDPLKLPAQF---------------------- 199 (372)
T ss_pred HHhChhhCCEEEEccHHHHHHHHHH--hCCC-------CceEEEcccccChhhcccch----------------------
Confidence 3344678999999999999998852 2211 15899999999877654310
Q ss_pred HHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEecc
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKF 466 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~ 466 (612)
..++...|+++||+.+.||++.+++|+.++.+ ++++|+|+|.|. ....++++.... ++.+.+.+ +
T Consensus 200 --------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g-~ 268 (372)
T cd04949 200 --------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGD--EEEKLKELIEELGLEDYVFLKG-Y 268 (372)
T ss_pred --------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCc--hHHHHHHHHHHcCCcceEEEcC-C
Confidence 01234689999999999999999999999965 789999999987 344455555443 34566555 4
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCcceEEecccccccccCCCCCHHHHHH
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~ 545 (612)
.+.+..+++.||++|+||..|+||++++|||++|+|||+++.+ |..+++.++.+|+++ ++.|+++|++
T Consensus 269 -~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv----------~~~d~~~la~ 337 (372)
T cd04949 269 -TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLV----------PKGDIEALAE 337 (372)
T ss_pred -CCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEe----------CCCcHHHHHH
Confidence 3446689999999999999999999999999999999999987 899999999999976 8999999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKW 580 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~ 580 (612)
+|.+++++ ++.+.++++++. .++|||+.++++|
T Consensus 338 ~i~~ll~~--~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELLND--PKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHcC--HHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999998 677888888774 6899999999876
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=243.42 Aligned_cols=291 Identities=17% Similarity=0.201 Sum_probs=203.8
Q ss_pred CcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchh
Q 007212 229 KNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 308 (612)
Q Consensus 229 pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (612)
.| +|++||+|..++|.+++... .+.|++|.+|-..+.. ..+..+ | ..
T Consensus 132 ~d-~iwihDyhl~llp~~lr~~~------~~~~i~~f~HipfP~~----e~~~~l--p--------------------~~ 178 (460)
T cd03788 132 GD-LVWVHDYHLLLLPQMLRERG------PDARIGFFLHIPFPSS----EIFRCL--P--------------------WR 178 (460)
T ss_pred CC-EEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCCCCCh----HHHhhC--C--------------------Ch
Confidence 47 59999999999999998753 5789999999433211 001111 0 11
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcC--CCccch--h----hhhccCeEEeeCCccCCCcCCCcccccccccCcchh
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--N----IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 380 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G~~~~--~----~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~ 380 (612)
..+-..+..+|.|.+.+..+.+.+.+... .+.+.. . .-+..++.+||||+|++.|.+....
T Consensus 179 ~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~----------- 247 (460)
T cd03788 179 EELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAAS----------- 247 (460)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcC-----------
Confidence 23345667799999999887766554210 111100 0 0012378999999999888654211
Q ss_pred hhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CC----eEEEEEecCC-------hhHHH
Q 007212 381 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTGK-------KPMEK 447 (612)
Q Consensus 381 ~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~----~~lvivG~g~-------~~~~~ 447 (612)
+..++.+++..+... +.++|+++||+++.||++.+++|++.+.+ ++ ++|+++|.+. ..+++
T Consensus 248 ----~~~~~~~~~~~~~~~--~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~ 321 (460)
T cd03788 248 ----PEVQERAAELRERLG--GRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRR 321 (460)
T ss_pred ----chhHHHHHHHHHhcC--CCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHH
Confidence 111222333334432 45899999999999999999999998865 33 6788887532 24556
Q ss_pred HHHHHHHHCC--------CceEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc----eEEcCCCCccc
Q 007212 448 QLEQLEILYP--------EKARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVD 514 (612)
Q Consensus 448 ~l~~l~~~~~--------~~v~~~~-~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e 514 (612)
++++++.+.+ ..+.++. ..+.+++..+|+.||++++||..|+||++++|||+||+| +|+|+.+|..+
T Consensus 322 ~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~ 401 (460)
T cd03788 322 EVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAE 401 (460)
T ss_pred HHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchh
Confidence 6666644321 1244444 347888889999999999999999999999999999999 99999888887
Q ss_pred ceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHH
Q 007212 515 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEET 583 (612)
Q Consensus 515 ~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~ 583 (612)
. +.+|+++ +|.|+++++++|.++++++ .+.+.++.+++ ...+|||+..++++++-
T Consensus 402 ~---~~~g~lv----------~p~d~~~la~ai~~~l~~~-~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 402 E---LSGALLV----------NPYDIDEVADAIHRALTMP-LEERRERHRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred h---cCCCEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 7 4678876 9999999999999999974 34445555444 35789999999998764
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.8e-25 Score=237.61 Aligned_cols=291 Identities=17% Similarity=0.194 Sum_probs=204.8
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|.+||+|..++|.+++... .+.++.|.+|-..+. .+.+..+ | ...
T Consensus 129 d-~vwvhDYhl~l~p~~lr~~~------~~~~igfFlHipfP~----~e~f~~l--p--------------------~r~ 175 (456)
T TIGR02400 129 D-IVWVHDYHLMLLPAMLRELG------VQNKIGFFLHIPFPS----SEIYRTL--P--------------------WRR 175 (456)
T ss_pred C-EEEEecchhhHHHHHHHhhC------CCCeEEEEEeCCCCC----hHHHhhC--C--------------------cHH
Confidence 6 59999999999999999874 578999999943221 1111111 1 123
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcC--CCccchh--h---hhccCeEEeeCCccCCCcCCCcccccccccCcchhhh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN--I---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 382 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G~~~~~--~---~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~ 382 (612)
.+-.++..+|.|-+.+..+++.+.+... .|.+... + -+..+|.++|||+|++.|.+.... .
T Consensus 176 ~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~------------~ 243 (456)
T TIGR02400 176 ELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKK------------P 243 (456)
T ss_pred HHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcC------------h
Confidence 3556788999999999999988775321 1221100 0 133489999999999988664321 0
Q ss_pred ccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEEEEEec-----CC--hhHHHHH
Q 007212 383 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGT-----GK--KPMEKQL 449 (612)
Q Consensus 383 ~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~lvivG~-----g~--~~~~~~l 449 (612)
........++++++ ++++|+++||+++.||++.+++|++.+.+ + ++.|+++|. ++ ..+++++
T Consensus 244 ~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i 318 (456)
T TIGR02400 244 SVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQV 318 (456)
T ss_pred hHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHH
Confidence 00011223555552 45799999999999999999999999864 3 366887753 22 2345566
Q ss_pred HHHHHHCCC--------ceEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc----eEEcCCCCcccce
Q 007212 450 EQLEILYPE--------KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVDTV 516 (612)
Q Consensus 450 ~~l~~~~~~--------~v~~~~-~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e~v 516 (612)
++++...++ .+.++. .++.+++..+|+.||++++||..||||++++||||||+| +|+|+.+|..+.+
T Consensus 319 ~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l 398 (456)
T TIGR02400 319 EELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQEL 398 (456)
T ss_pred HHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHh
Confidence 665332111 133333 446788889999999999999999999999999999999 9999998888877
Q ss_pred ecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHH
Q 007212 517 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 517 ~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y 584 (612)
. +|+++ +|.|+++++++|.++++++. +.+.++.++. ....||+...++++++-+
T Consensus 399 ~---~gllV----------nP~d~~~lA~aI~~aL~~~~-~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 399 N---GALLV----------NPYDIDGMADAIARALTMPL-EEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred C---CcEEE----------CCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 4 68865 99999999999999999742 3333333322 356699999999988654
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-23 Score=223.79 Aligned_cols=342 Identities=16% Similarity=0.029 Sum_probs=223.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++.. .||...+..+|+++|.++||+|++++.......+ .....|+++
T Consensus 2 ~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~----------------------~~~~~g~~~ 53 (357)
T PRK00726 2 KKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGMEAR----------------------LVPKAGIEF 53 (357)
T ss_pred cEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchhhh----------------------ccccCCCcE
Confidence 999999864 5888888889999999999999999975311000 001136777
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
+.++.+..... . ..........+......+.+.+.. .+||+ +|+|.|..++.+
T Consensus 54 ~~~~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~~~~~ik~----------~~pDv-v~~~~~~~~~~~ 106 (357)
T PRK00726 54 HFIPSGGLRRK-------G---------SLANLKAPFKLLKGVLQARKILKR----------FKPDV-VVGFGGYVSGPG 106 (357)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh----------cCCCE-EEECCCcchhHH
Confidence 77754321110 0 001111111222223333222221 14895 999988776665
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
....+. .++|++++.|+..+ . ...+..+..+|.+++.
T Consensus 107 ~~~~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~r~~~~~~d~ii~~ 143 (357)
T PRK00726 107 GLAARL-------LGIPLVIHEQNAVP----------------------------------G--LANKLLARFAKKVATA 143 (357)
T ss_pred HHHHHH-------cCCCEEEEcCCCCc----------------------------------c--HHHHHHHHHhchheEC
Confidence 544433 48899987664211 0 1123456789999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
++..... .+. .++.+|+||+|.+.+.+.. .+++++++. +.+
T Consensus 144 ~~~~~~~--------~~~------~~i~vi~n~v~~~~~~~~~-----------------------~~~~~~~~~--~~~ 184 (357)
T PRK00726 144 FPGAFPE--------FFK------PKAVVTGNPVREEILALAA-----------------------PPARLAGRE--GKP 184 (357)
T ss_pred chhhhhc--------cCC------CCEEEECCCCChHhhcccc-----------------------hhhhccCCC--CCe
Confidence 8844211 122 2999999999987664321 112345543 447
Q ss_pred EEEEEccCccccCHHHHH-HHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 405 VIGFIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li-~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
+|+++|+....|+...++ +|++++.+....++++|.|. .++..+.+ . .+.++.+.+. . +....+++.||+++.
T Consensus 185 ~i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~--~~~~~~~~-~-~~~~v~~~g~-~-~~~~~~~~~~d~~i~ 258 (357)
T PRK00726 185 TLLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD--LEEVRAAY-A-AGINAEVVPF-I-DDMAAAYAAADLVIC 258 (357)
T ss_pred EEEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc--HHHHHHHh-h-cCCcEEEeeh-H-hhHHHHHHhCCEEEE
Confidence 889999998888876555 99988855335577889887 34443343 3 4433444433 3 456689999999998
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccceecCcceEEecccccccccCCCCC--HHHHHHHHHHHHHh
Q 007212 484 PSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~~~~~~~~~~~~v~~~d--~~~la~~i~~ll~~ 553 (612)
++- +.+++|||++|+|+|++..++ ..+.+.+..+|+++ ++.| +++|+++|++++++
T Consensus 259 ~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~----------~~~~~~~~~l~~~i~~ll~~ 324 (357)
T PRK00726 259 RAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLI----------PQSDLTPEKLAEKLLELLSD 324 (357)
T ss_pred CCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEE----------EcccCCHHHHHHHHHHHHcC
Confidence 763 689999999999999987643 23556677789976 6666 99999999999998
Q ss_pred hCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHHH
Q 007212 554 YGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 554 ~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y~ 585 (612)
++.+++|++++. .+.++-+.+++.|+++..
T Consensus 325 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 325 --PERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred --HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 777788888773 577888888888877654
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-22 Score=213.47 Aligned_cols=321 Identities=14% Similarity=0.072 Sum_probs=200.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||+|++.+ .||-......|+++|.++||+|++++.......+ + ....|+++
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~--------------------~--~~~~g~~~ 52 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKR--------------------L--VPKAGIEF 52 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhc--------------------c--cccCCCce
Confidence 799988865 3555555569999999999999999864221000 0 01136666
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
+.++...+... . .......+..+.....+..+.+.. .+||+ +|+|.+......
T Consensus 53 ~~i~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~l~~~i~~----------~~pDv-Vi~~~~~~~~~~ 105 (348)
T TIGR01133 53 YFIPVGGLRRK-------G---------SFRLIKTPLKLLKAVFQARRILKK----------FKPDA-VIGFGGYVSGPA 105 (348)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh----------cCCCE-EEEcCCcccHHH
Confidence 66643221110 0 111111111112222222222221 25895 888866555544
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
..+... .++|++++.|+..+ . ...+...+.+|.++++
T Consensus 106 ~~~~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~d~ii~~ 142 (348)
T TIGR01133 106 GLAAKL-------LGIPLFHHEQNAVP----------------------------------G--LTNKLLSRFAKKVLIS 142 (348)
T ss_pred HHHHHH-------cCCCEEEECCCCCc----------------------------------c--HHHHHHHHHhCeeEEC
Confidence 444433 36788744332110 0 1123456789999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+...+.+ +..+|+||+|...+.+... +++++++. +.+
T Consensus 143 ~~~~~~~~-----------------~~~~i~n~v~~~~~~~~~~-----------------------~~~~~~~~--~~~ 180 (348)
T TIGR01133 143 FPGAKDHF-----------------EAVLVGNPVRQEIRSLPVP-----------------------RERFGLRE--GKP 180 (348)
T ss_pred chhHhhcC-----------------CceEEcCCcCHHHhcccch-----------------------hhhcCCCC--CCe
Confidence 99876653 2378999999765543210 22456663 447
Q ss_pred EEEEEccCccccCHHH-HHHHHHhcccCCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 405 VIGFIGRLEEQKGSDI-LAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~-li~A~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
+|+++|+....|++.. +++|++.+.+.+++++++ |+++ . +.+++...+++ +.....|.......+|+.||++|
T Consensus 181 ~i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~--~-~~l~~~~~~~~--l~~~v~~~~~~~~~~l~~ad~~v 255 (348)
T TIGR01133 181 TILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND--L-EKVKNVYQELG--IEAIVTFIDENMAAAYAAADLVI 255 (348)
T ss_pred EEEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch--H-HHHHHHHhhCC--ceEEecCcccCHHHHHHhCCEEE
Confidence 8999999888888654 568888886656676544 4443 2 45666555544 22223333325668999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCCC-------cccceecCcceEEecccccccccCCCCC--HHHHHHHHHHHHHh
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGG-------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALAT 553 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg-------~~e~v~~g~~G~~~~~~~~~~~~v~~~d--~~~la~~i~~ll~~ 553 (612)
.++ + |++++|||++|+|+|+++.++ ..+++.++.+|+++ ++.| +++++++|.+++++
T Consensus 256 ~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~----------~~~~~~~~~l~~~i~~ll~~ 321 (348)
T TIGR01133 256 SRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVI----------RQKELLPEKLLEALLKLLLD 321 (348)
T ss_pred ECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEE----------ecccCCHHHHHHHHHHHHcC
Confidence 865 2 789999999999999988644 23577788899976 7765 99999999999987
Q ss_pred hCHHHHHHHHHHH
Q 007212 554 YGTQALAEMMKNG 566 (612)
Q Consensus 554 ~~~~~~~~~~~~~ 566 (612)
++.+.+|++++
T Consensus 322 --~~~~~~~~~~~ 332 (348)
T TIGR01133 322 --PANLEAMAEAA 332 (348)
T ss_pred --HHHHHHHHHHH
Confidence 77778888776
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-22 Score=212.38 Aligned_cols=321 Identities=14% Similarity=0.052 Sum_probs=207.1
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
+|++.+.+ +||...++..|+++|.++||+|++++.......+ .....|++++
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~----------------------~~~~~~~~~~ 52 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRGLEAR----------------------LVPKAGIPLH 52 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh----------------------cccccCCceE
Confidence 46666654 6888888999999999999999999976321111 0012356666
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHH---HHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccc
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQ---AALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSL 242 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~ 242 (612)
.+..+.+..+ . .......+..+.+ .+.+.++.. +||+ ||+|.+...+
T Consensus 53 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~i~~~-------------~pDv-I~~~~~~~~~ 102 (350)
T cd03785 53 TIPVGGLRRK-------G---------SLKKLKAPFKLLKGVLQARKILKKF-------------KPDV-VVGFGGYVSG 102 (350)
T ss_pred EEEecCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHhc-------------CCCE-EEECCCCcch
Confidence 6643322110 0 0011111111122 233333332 5896 7888655544
Q ss_pred hHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
......+. .++|+++..|+... . .+.+.....+|.++
T Consensus 103 ~~~~~a~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~~~vi 139 (350)
T cd03785 103 PVGLAAKL-------LGIPLVIHEQNAVP----------------------------------G--LANRLLARFADRVA 139 (350)
T ss_pred HHHHHHHH-------hCCCEEEEcCCCCc----------------------------------c--HHHHHHHHhhCEEE
Confidence 33333333 47888876553110 0 11233456799999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
++|+...+.+. ..++.+|+||+|.+.+.+.. . +++++++. +
T Consensus 140 ~~s~~~~~~~~--------------~~~~~~i~n~v~~~~~~~~~----------------------~-~~~~~~~~--~ 180 (350)
T cd03785 140 LSFPETAKYFP--------------KDKAVVTGNPVREEILALDR----------------------E-RARLGLRP--G 180 (350)
T ss_pred EcchhhhhcCC--------------CCcEEEECCCCchHHhhhhh----------------------h-HHhcCCCC--C
Confidence 99998776511 12899999999987664321 1 56667764 3
Q ss_pred CcEEEEEccCccccCHH-HHHHHHHhcccCCeEE-EEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 403 IPVIGFIGRLEEQKGSD-ILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d-~li~A~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
.++|+++|+....|+.+ .+++|++.+.++++++ +++|+|. . +.+++...++.+++.+.+.. +....+|+.||+
T Consensus 181 ~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~--~-~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~ 255 (350)
T cd03785 181 KPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD--L-EEVKKAYEELGVNYEVFPFI--DDMAAAYAAADL 255 (350)
T ss_pred CeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc--H-HHHHHHHhccCCCeEEeehh--hhHHHHHHhcCE
Confidence 47888888877777765 4568888886666764 4678773 2 34444444444567766654 556689999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccceecCcceEEecccccccccCCCC--CHHHHHHHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRA 550 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~l 550 (612)
+|.++. +++++|||++|+|+|+++.++ ..+.+.+..+|+++ ++. |+++++++|.++
T Consensus 256 ~v~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v----------~~~~~~~~~l~~~i~~l 321 (350)
T cd03785 256 VISRAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLI----------PQEELTPERLAAALLEL 321 (350)
T ss_pred EEECCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEE----------ecCCCCHHHHHHHHHHH
Confidence 998763 689999999999999987654 24566667789976 665 899999999999
Q ss_pred HHhhCHHHHHHHHHHHH
Q 007212 551 LATYGTQALAEMMKNGM 567 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~~ 567 (612)
+++ ++.+++|++++.
T Consensus 322 l~~--~~~~~~~~~~~~ 336 (350)
T cd03785 322 LSD--PERLKAMAEAAR 336 (350)
T ss_pred hcC--HHHHHHHHHHHH
Confidence 987 677788888763
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-22 Score=215.53 Aligned_cols=221 Identities=13% Similarity=0.094 Sum_probs=161.3
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHH
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 394 (612)
.+++|.++++|+..++.+.+ +|++.+ ++.++.|.++.. |.+..+ +..++++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~---~gi~~~------ki~v~G~p~~~~-f~~~~~-------------------~~~~~~~ 195 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVD---IGVPPE------QVVETGIPIRSS-FELKIN-------------------PDIIYNK 195 (380)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh------HEEEECcccChH-HcCcCC-------------------HHHHHHH
Confidence 56899999999999999987 677655 777776655432 222111 3456788
Q ss_pred hCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHH
Q 007212 395 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 474 (612)
Q Consensus 395 ~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 474 (612)
++++.+. ..++++.|++...|+++.+++++.+. ++++++++|.+...+.+.++++....++++.+.+..+ ....+
T Consensus 196 ~~l~~~~-~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~--~~~~l 270 (380)
T PRK13609 196 YQLCPNK-KILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVE--NIDEL 270 (380)
T ss_pred cCCCCCC-cEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechh--hHHHH
Confidence 8987542 34566678898899999999998754 6899988764444466777777666665677775542 35679
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC-CCCcc----cceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 475 ~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~----e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
++.||+++. ++.|++++|||++|+|+|+++ .+|.. +.+.+ +|+.+ ...|+++++++|.+
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~----------~~~~~~~l~~~i~~ 334 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAV----------VIRDDEEVFAKTEA 334 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEE----------EECCHHHHHHHHHH
Confidence 999999884 566999999999999999986 45531 23333 34432 45799999999999
Q ss_pred HHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHH
Q 007212 550 ALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l 587 (612)
++++ ++.+.+|++++ +...++++.+++.+++++...
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 335 LLQD--DMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHCC--HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 9998 67778888776 356689999999998887643
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.9e-22 Score=228.86 Aligned_cols=298 Identities=17% Similarity=0.226 Sum_probs=207.4
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|..||+|..++|.+++... .++++.|.+|-..+.- ..|..+. ...
T Consensus 149 d-~vWvhDYhL~llp~~lR~~~------~~~~igfFlHiPFPs~----e~fr~lp----------------------~r~ 195 (797)
T PLN03063 149 D-VVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHTPFPSS----EIYKTLP----------------------SRS 195 (797)
T ss_pred C-EEEEecchhhhHHHHHHHhC------CCCcEEEEecCCCCCH----HHHhhCC----------------------CHH
Confidence 6 59999999999999999875 6899999999543311 1111111 112
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcC--CCccc--hhhh---hccCeEEeeCCccCCCcCCCcccccccccCcchhhh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 382 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G~~~--~~~~---~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~ 382 (612)
.+-.++..||.|-+.+..+++.+.+... .|.+. ..+. +..+|.+||||||++.|.+.... + .
T Consensus 196 ~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~-------~----~ 264 (797)
T PLN03063 196 ELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCEL-------P----E 264 (797)
T ss_pred HHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcC-------h----h
Confidence 3455788999999999999988775211 12111 1111 12478999999999888654210 0 0
Q ss_pred ccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CC----eEEEEEecC-----C--hhHHHHH
Q 007212 383 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTG-----K--KPMEKQL 449 (612)
Q Consensus 383 ~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~----~~lvivG~g-----~--~~~~~~l 449 (612)
.......+++.++ ++++|+++||+++.||++.+++|++.+.+ ++ +.|++++.+ + ..+++++
T Consensus 265 -~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v 338 (797)
T PLN03063 265 -VKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQV 338 (797)
T ss_pred -HHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHH
Confidence 0001123444443 34799999999999999999999999864 44 445544422 2 2355566
Q ss_pred HHHHHHCCCc--------eEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc----eEEcCCCCcccce
Q 007212 450 EQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVDTV 516 (612)
Q Consensus 450 ~~l~~~~~~~--------v~~~~-~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e~v 516 (612)
+++....+++ +.++. .++.+++..+|+.||++|+||..||+|++.+|||+||+| +|+|..+|..+.+
T Consensus 339 ~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l 418 (797)
T PLN03063 339 HELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL 418 (797)
T ss_pred HHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh
Confidence 6664222111 22222 346678889999999999999999999999999999999 9999999988876
Q ss_pred ecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 517 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 517 ~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
+.+|+++ +|.|+++++++|.++++++ ++.++++.+.. ....++|...++.+++.|.++...
T Consensus 419 --~~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~ 481 (797)
T PLN03063 419 --GAGALLV----------NPWNITEVSSAIKEALNMS-DEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVE 481 (797)
T ss_pred --cCCeEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhh
Confidence 4468865 9999999999999999963 33333333322 468899999999999999887653
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-21 Score=206.70 Aligned_cols=222 Identities=16% Similarity=0.173 Sum_probs=162.7
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+++..++.||.|+++|+...+.+.. ++ + ++.+|+||+|.+.|.+.... .
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~---~~-~--------~i~~i~ngvd~~~f~~~~~~------------------~ 194 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR---LN-P--------NVVLVPNGVDYEHFAAARDP------------------P 194 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh---CC-C--------CEEEcccccCHHHhhccccc------------------C
Confidence 56788899999999999999998875 33 2 89999999999988765321 0
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccCh
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 468 (612)
...+. .. ..+.++|+|+|++.+.++++.+.++++.. ++++|+|+|.++...+ ...+. . ..++.+.+..+.
T Consensus 195 ~~~~~-~~---~~~~~~i~y~G~l~~~~d~~ll~~la~~~--p~~~~vliG~~~~~~~--~~~~~-~-~~nV~~~G~~~~ 264 (373)
T cd04950 195 PPPAD-LA---ALPRPVIGYYGAIAEWLDLELLEALAKAR--PDWSFVLIGPVDVSID--PSALL-R-LPNVHYLGPKPY 264 (373)
T ss_pred CChhH-Hh---cCCCCEEEEEeccccccCHHHHHHHHHHC--CCCEEEEECCCcCccC--hhHhc-c-CCCEEEeCCCCH
Confidence 00001 10 12458999999999988888777666543 7899999999831111 11111 1 246999998888
Q ss_pred HHHHHHHHhccEEEEcCCC-----CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHH
Q 007212 469 PLAHMIIAGADFILIPSRF-----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~-----E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~l 543 (612)
++++.+++.+|++++|+.. +.+|++++||||||+|||+|+.+.+. ..+..+++ .++|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~---~~~~~~~~-----------~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVR---RYEDEVVL-----------IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHH---hhcCcEEE-----------eCCCHHHH
Confidence 9999999999999999864 36799999999999999999865444 33333443 56799999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHH
Q 007212 544 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 544 a~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~ 586 (612)
+++|.+++.+.......+ ..+ +.+.+||+..++++++.+.+
T Consensus 331 ~~ai~~~l~~~~~~~~~~-~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 331 VAAIEKALLEDGPARERR-RLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHhcCCchHHHH-HHH-HHHHCCHHHHHHHHHHHHHh
Confidence 999999877643333222 222 67889999999999976654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.5e-22 Score=227.07 Aligned_cols=297 Identities=16% Similarity=0.220 Sum_probs=205.4
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|..||+|..++|.+++.+. .+.++.|.+|-..++.. .+.. +| ...
T Consensus 135 d-~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~pfP~~~----~f~~--lp--------------------~~~ 181 (726)
T PRK14501 135 D-VVWVHDYQLMLLPAMLRERL------PDARIGFFLHIPFPSFE----VFRL--LP--------------------WRE 181 (726)
T ss_pred C-EEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCCCCChH----HHhh--CC--------------------ChH
Confidence 6 59999999999999999864 58899999995544221 1111 11 112
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcC--CCccch--hh-h--hccCeEEeeCCccCCCcCCCcccccccccCcchhhh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NI-I--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 382 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G~~~~--~~-~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~ 382 (612)
.+-.++..+|.|-+.+..+++.+.+... .|.+.. .+ + +..++.++|||+|++.|.+.... .
T Consensus 182 ~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~------------~ 249 (726)
T PRK14501 182 EILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQD------------P 249 (726)
T ss_pred HHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcC------------c
Confidence 3455788999999999998887664211 111100 00 0 12368999999999988764210 0
Q ss_pred ccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEEEEEecCC-------hhHHHHH
Q 007212 383 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KPMEKQL 449 (612)
Q Consensus 383 ~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~lvivG~g~-------~~~~~~l 449 (612)
........+++..+ ++++|+++||+++.||++.+++|++.+.+ + +++|+++|.+. .++++++
T Consensus 250 ~~~~~~~~lr~~~~-----~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~ 324 (726)
T PRK14501 250 EVQEEIRRLRQDLR-----GRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREI 324 (726)
T ss_pred hHHHHHHHHHHHcC-----CCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHH
Confidence 00111223444432 45799999999999999999999999864 4 47898887431 2455566
Q ss_pred HHHHHHCCC--------ceE-EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC-----ceEEcCCCCcccc
Q 007212 450 EQLEILYPE--------KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGLVDT 515 (612)
Q Consensus 450 ~~l~~~~~~--------~v~-~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~~e~ 515 (612)
++++.+.++ .+. +...++.+++..+|+.||++++||..||||++++|||+||+ ||++...|+..++
T Consensus 325 ~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l 404 (726)
T PRK14501 325 DELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL 404 (726)
T ss_pred HHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHh
Confidence 665433211 133 33455778888999999999999999999999999999954 6666667887777
Q ss_pred eecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHH-HHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 516 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 516 v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~-~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
+ .|+++ +|.|+++++++|.++++++..+...++.+. .....|||+..++++++.|.++...
T Consensus 405 ~----~~llv----------~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~ 466 (726)
T PRK14501 405 A----EALLV----------NPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEK 466 (726)
T ss_pred C----cCeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 5 37865 999999999999999987423333222211 1357899999999999999988653
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-20 Score=198.49 Aligned_cols=216 Identities=16% Similarity=0.133 Sum_probs=159.1
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHH
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 394 (612)
.+.+|.++++|+..++.+.+ +|++.+ ++.++++++|.+.+.+... +..++++
T Consensus 148 ~~~~d~~~~~s~~~~~~l~~---~g~~~~------ki~v~g~~v~~~f~~~~~~-------------------~~~~r~~ 199 (382)
T PLN02605 148 HKGVTRCFCPSEEVAKRALK---RGLEPS------QIRVYGLPIRPSFARAVRP-------------------KDELRRE 199 (382)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECcccCHhhccCCCC-------------------HHHHHHH
Confidence 46899999999999999987 677755 8999999998765443321 5678999
Q ss_pred hCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcc------cCCeE-EEEEecCChhHHHHHHHHHHHCCCceEEEeccC
Q 007212 395 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI------KENVQ-IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 395 ~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~------~~~~~-lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 467 (612)
+|++.+ .++|+++|+....|++..+++++..+. .++.+ ++++|.+. .+.+.++++.. ..++.+.+..+
T Consensus 200 ~gl~~~--~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~--~~~v~~~G~~~ 274 (382)
T PLN02605 200 LGMDED--LPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDW--KIPVKVRGFVT 274 (382)
T ss_pred cCCCCC--CcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcc--cCCeEEEeccc
Confidence 999854 489999999999999999999998753 35666 56677653 34555655422 23466555543
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC------CCcccceecCcceEEecccccccccCCCCCHH
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST------GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~------gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~ 541 (612)
+++.+|++||++|.++ .|++++|||+||+|+|+++. |+. +.+.+++.|+. ..|++
T Consensus 275 --~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~------------~~~~~ 335 (382)
T PLN02605 275 --NMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAF------------SESPK 335 (382)
T ss_pred --cHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceee------------cCCHH
Confidence 4678999999999865 48899999999999999984 444 33444556763 38999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHH
Q 007212 542 AVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEET 583 (612)
Q Consensus 542 ~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~ 583 (612)
+++++|.+++++. ++.+++|++++. ....+.+.+++.+.++
T Consensus 336 ~la~~i~~ll~~~-~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 336 EIARIVAEWFGDK-SDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHcCC-HHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 9999999999862 456777877763 3445666666555543
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-21 Score=182.02 Aligned_cols=164 Identities=27% Similarity=0.439 Sum_probs=140.3
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcc---cCCeEEEEEecCChhHHHHHHHHHHHC--CCceEE
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI---KENVQIIVLGTGKKPMEKQLEQLEILY--PEKARG 462 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~---~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~ 462 (612)
++..++..+.+. +.++|+|+||+.+.||++.+++|+..+. .+++.++|+|++. ....++.+...+ ..++.+
T Consensus 2 ~~~~~~~~~~~~--~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIPD--KKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT-T--TSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCCC--CCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--cccccccccccccccccccc
Confidence 556677777764 4589999999999999999999999986 4799999999776 555566665554 357888
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHH
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 542 (612)
.+..+.+++..+++.||++++||..|++|++++|||++|+|||+++.|+..|++.++.+|+++ ++.|+++
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~ 147 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLF----------DPNDIEE 147 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEE----------STTSHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEe----------CCCCHHH
Confidence 888888888899999999999999999999999999999999999999999999999999987 8899999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHH
Q 007212 543 VSTTVRRALATYGTQALAEMMKNGM 567 (612)
Q Consensus 543 la~~i~~ll~~~~~~~~~~~~~~~~ 567 (612)
++++|.+++++ ++.++.|++++.
T Consensus 148 l~~~i~~~l~~--~~~~~~l~~~~~ 170 (172)
T PF00534_consen 148 LADAIEKLLND--PELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--HHHHHHHHHHhc
Confidence 99999999999 678888888764
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.8e-21 Score=201.84 Aligned_cols=240 Identities=18% Similarity=0.179 Sum_probs=178.4
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (612)
....+|.+++.|...+..+... -+.+ ....+.+.+-.+|.+.+.+... +.+...+...+.
T Consensus 206 ~~~~~~~~~~ns~~~~~~f~~~---~~~L----~~~d~~~~y~ei~~s~~~~~~~-------------~~~~~~~~~~r~ 265 (495)
T KOG0853|consen 206 TTGLAWKILVNSYFTKRQFKAT---FVSL----SNSDITSTYPEIDGSWFTYGQY-------------ESHLELRLPVRL 265 (495)
T ss_pred hhhccceEecchhhhhhhhhhh---hhhc----CCCCcceeeccccchhcccccc-------------ccchhcccccce
Confidence 4567899999998888887751 1111 2235888899999887765321 111122222333
Q ss_pred HhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc-------CCeEEEEEecC--C------hhHHHHHHHHHHHCC-
Q 007212 394 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTG--K------KPMEKQLEQLEILYP- 457 (612)
Q Consensus 394 ~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~-------~~~~lvivG~g--~------~~~~~~l~~l~~~~~- 457 (612)
..+.. .....+..+.|+.+.||++++++++..+.. .+.+++++|+. + .++.+.+.++.++++
T Consensus 266 ~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 266 YRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred eeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 33332 224688889999999999999999999865 36788999842 1 357778888888874
Q ss_pred --CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccC
Q 007212 458 --EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 458 --~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v 535 (612)
..+.+....+......+++.+...+.....|.||++.+|||+||+|||+++.||..|+|.++.+||++
T Consensus 344 ~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~---------- 413 (495)
T KOG0853|consen 344 LGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLI---------- 413 (495)
T ss_pred cCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceee----------
Confidence 33444455555555567777777776666699999999999999999999999999999999999986
Q ss_pred CCCCHH---HHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHH
Q 007212 536 DPVDVA---AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 536 ~~~d~~---~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+| +.+ .+++++.++.++ ++.+.+|++++ +.+.|||+.+.+++.++.....
T Consensus 414 dp-~~e~~~~~a~~~~kl~~~--p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 414 DP-GQEAVAELADALLKLRRD--PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred CC-chHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 77 555 699999999999 77788888887 5678999999999888887554
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-20 Score=200.84 Aligned_cols=223 Identities=13% Similarity=0.109 Sum_probs=159.8
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHH
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 394 (612)
...+|.+++.|+..++.+.+ .|++.+ +|.++.|+++.....+. + +..++++
T Consensus 145 ~~~~d~~~v~s~~~~~~l~~---~gi~~~------ki~v~GiPv~~~f~~~~-~-------------------~~~~~~~ 195 (391)
T PRK13608 145 TPYSTRYYVATKETKQDFID---VGIDPS------TVKVTGIPIDNKFETPI-D-------------------QKQWLID 195 (391)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECeecChHhcccc-c-------------------HHHHHHH
Confidence 45799999999999999986 677655 78887777764332211 1 4456778
Q ss_pred hCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHH
Q 007212 395 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 474 (612)
Q Consensus 395 ~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 474 (612)
+|++.+. ..++++.|++...||++.+++++.+. .+++++++++.+.+.+.+.+++.... .+++.+.+ |. +.++.+
T Consensus 196 ~~l~~~~-~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~~-~~~v~~~G-~~-~~~~~~ 270 (391)
T PRK13608 196 NNLDPDK-QTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFKS-NENVLILG-YT-KHMNEW 270 (391)
T ss_pred cCCCCCC-CEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhcc-CCCeEEEe-cc-chHHHH
Confidence 8987542 34567799999999999999986432 26789876654333344444443222 23566555 43 346789
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC-CC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 475 ~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
++.||++|. ++.|++++|||++|+|+|+++. +| ...++.+.+.|+. ..|.++++++|.+
T Consensus 271 ~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~------------~~~~~~l~~~i~~ 334 (391)
T PRK13608 271 MASSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI------------ADTPEEAIKIVAS 334 (391)
T ss_pred HHhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE------------eCCHHHHHHHHHH
Confidence 999999995 4579999999999999999964 33 1123334455653 4699999999999
Q ss_pred HHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHHHHHHH
Q 007212 550 ALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
++++ ++.+.+|++++. .+.++++.+++++++++..+..
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 335 LTNG--NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HhcC--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 9988 678888888874 5679999999999998876654
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-20 Score=201.23 Aligned_cols=234 Identities=16% Similarity=0.122 Sum_probs=164.2
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+++..++.+|.|+++|+..++.+.+ .|++ +. +.+++|+ +.+.+.+... ....
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~---~g~~------~~-i~vi~n~-~~d~~~~~~~----------------~~~~ 222 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLA---LGAK------NE-VTVTGNL-KFDIEVPPEL----------------AARA 222 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCC------CC-cEecccc-cccCCCChhh----------------HHHH
Confidence 34567788999999999999999986 5654 12 7788884 3332221110 1123
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCc-e-----
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEK-A----- 460 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~-v----- 460 (612)
..++++++ + +.++++++|+. .|+.+.+++|++++.+ ++++|+|+|+|+.. .+.++++..+.+-. +
T Consensus 223 ~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 223 ATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPER-FKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred HHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhh-HHHHHHHHHhCCCcEEEccCC
Confidence 45677776 3 34788888874 6889999999999865 79999999998732 24455555544311 1
Q ss_pred --------EEEeccChHHHHHHHHhccEEEE-cCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecC-cceEEecccc
Q 007212 461 --------RGVAKFNIPLAHMIIAGADFILI-PSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEG-FTGFQMGSFS 529 (612)
Q Consensus 461 --------~~~~~~~~~~~~~i~~~aDv~v~-pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g-~~G~~~~~~~ 529 (612)
..++. ...++..+|+.||++++ +|..|++|.+++|||+||+|||+++. ++..|+++.. .+|+++
T Consensus 296 ~~~~~~~~v~l~~-~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~---- 370 (425)
T PRK05749 296 EPPSADTDVLLGD-TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAI---- 370 (425)
T ss_pred CCCCCCCcEEEEe-cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeE----
Confidence 11122 23456789999999666 67779999999999999999999864 6666665542 356655
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 530 VDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 530 ~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
.+.|+++|+++|.+++++ ++.+.+|++++...--+....++++.+++.+.+.
T Consensus 371 ------~~~d~~~La~~l~~ll~~--~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 371 ------QVEDAEDLAKAVTYLLTD--PDARQAYGEAGVAFLKQNQGALQRTLQLLEPYLP 422 (425)
T ss_pred ------EECCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhcc
Confidence 789999999999999998 7778888888743211225778888888877654
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-19 Score=175.53 Aligned_cols=117 Identities=28% Similarity=0.442 Sum_probs=96.1
Q ss_pred EEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc-ChHHHHHHHHhccEEEEc
Q 007212 408 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIAGADFILIP 484 (612)
Q Consensus 408 ~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~~i~~~aDv~v~p 484 (612)
|+|++.+.||++.+++++..+.+ ++++++++|.+.................++.+.+.+ ..+....+++.||++++|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~ 188 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLP 188 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEec
Confidence 99999999999999999999976 599999999987432222111122234568777776 455666677779999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEE
Q 007212 485 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQ 524 (612)
Q Consensus 485 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~ 524 (612)
|..|++|++++|||++|+|+|+|+.++..|++.++.+|++
T Consensus 189 ~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~ 228 (229)
T cd01635 189 SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLL 228 (229)
T ss_pred ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEE
Confidence 9999999999999999999999999999999999999986
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.4e-19 Score=193.07 Aligned_cols=290 Identities=16% Similarity=0.149 Sum_probs=206.0
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|..||+|..++|.+++... .+.++-|.+|-..+.. ..+..+ | ...
T Consensus 134 d-~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHiPFPs~----eifr~L--P--------------------~r~ 180 (487)
T TIGR02398 134 A-TVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHTPFPSA----DVFNIL--P--------------------WRE 180 (487)
T ss_pred C-EEEEecchhhHHHHHHHHhC------CCCeEEEEeeCCCCCh----HHHhhC--C--------------------chH
Confidence 6 59999999999999999874 5889999999543311 111111 1 123
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcC--CCccchh-----------------------h---hhccCeEEeeCCccCC
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----------------------I---IRKTGIKGIVNGMDVQ 361 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G~~~~~-----------------------~---~~~~~i~vI~ngvd~~ 361 (612)
.+-.++..+|.|-+.+..+++.+.+... .|.+... + =+..++.++|.|||++
T Consensus 181 ~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~ 260 (487)
T TIGR02398 181 QIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPE 260 (487)
T ss_pred HHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHH
Confidence 3455788999999999999988775221 1211100 0 0223589999999999
Q ss_pred CcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEE
Q 007212 362 EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQI 435 (612)
Q Consensus 362 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~l 435 (612)
.|.+.... ..-....+.++++++ ++++|++++|++..||++..++|++++.+ | ++.|
T Consensus 261 ~f~~~~~~------------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~L 323 (487)
T TIGR02398 261 RIRSALAA------------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTL 323 (487)
T ss_pred HHHHHhcC------------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEE
Confidence 88654210 001122445777776 34799999999999999999999999865 4 5799
Q ss_pred EEEecCC-------hhHHHHHHHHHHHCCC---------ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHH
Q 007212 436 IVLGTGK-------KPMEKQLEQLEILYPE---------KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 499 (612)
Q Consensus 436 vivG~g~-------~~~~~~l~~l~~~~~~---------~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma 499 (612)
+++|.+. .++.+++++++.+.++ .+.+...++.+++..+|+.||++++||..||++++..|+++
T Consensus 324 vqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva 403 (487)
T TIGR02398 324 VTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVA 403 (487)
T ss_pred EEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHh
Confidence 9998764 2466677776655321 13344455778888999999999999999999999999999
Q ss_pred cCC----ceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhcCcH
Q 007212 500 YGT----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWK 574 (612)
Q Consensus 500 ~G~----PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~ 574 (612)
|+. |+|.|..+|..+.+. .+++ |+|.|+++++++|.++|+++..++.+++.+.. ....++-.
T Consensus 404 ~~~~~~GvLILSefaGaa~~l~---~All----------VNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~ 470 (487)
T TIGR02398 404 AQGLLDGVLVLSEFAGAAVELK---GALL----------TNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQ 470 (487)
T ss_pred hhcCCCCCEEEeccccchhhcC---CCEE----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHH
Confidence 988 999999999887763 3665 49999999999999999996444444443322 34556655
Q ss_pred HHHHHHHH
Q 007212 575 GPAKKWEE 582 (612)
Q Consensus 575 ~~a~~~~~ 582 (612)
.-++.+++
T Consensus 471 ~W~~~fl~ 478 (487)
T TIGR02398 471 RWADEFLA 478 (487)
T ss_pred HHHHHHHH
Confidence 55555554
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-16 Score=166.33 Aligned_cols=185 Identities=16% Similarity=0.097 Sum_probs=136.3
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHH
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
..+++..++.+|.++++|+.+++.+.+ .|+..+ ++.+++|+.+.....+..
T Consensus 114 ~~~~~~~~~~aD~iI~~S~~~~~~l~~---~g~~~~------~i~~~~~~~~~~~~~~~~-------------------- 164 (333)
T PRK09814 114 MKEEIDMLNLADVLIVHSKKMKDRLVE---EGLTTD------KIIVQGIFDYLNDIELVK-------------------- 164 (333)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcC------ceEecccccccccccccc--------------------
Confidence 356778899999999999999999986 566433 666666655432111100
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccC
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 467 (612)
.....+.|+|+|++....++. + ..++++|+|+|+|+... ...+++.+.+.++
T Consensus 165 -----------~~~~~~~i~yaG~l~k~~~l~---~-----~~~~~~l~i~G~g~~~~---------~~~~~V~f~G~~~ 216 (333)
T PRK09814 165 -----------TPSFQKKINFAGNLEKSPFLK---N-----WSQGIKLTVFGPNPEDL---------ENSANISYKGWFD 216 (333)
T ss_pred -----------cccCCceEEEecChhhchHHH---h-----cCCCCeEEEECCCcccc---------ccCCCeEEecCCC
Confidence 011346899999999543221 1 23679999999997321 2345799999999
Q ss_pred hHHHHHHHHhccEEEEcCCC-----------CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCC
Q 007212 468 IPLAHMIIAGADFILIPSRF-----------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~-----------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~ 536 (612)
.+++..+++. |+.+++... -.+|.++.++||||+|||+++.+++.|+|+++.+|+++ +
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v----------~ 285 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVV----------D 285 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEe----------C
Confidence 9999888888 776665421 35788999999999999999999999999999999975 4
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 007212 537 PVDVAAVSTTVRRALATYGTQALAEMMKNG 566 (612)
Q Consensus 537 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~ 566 (612)
+.+++++.+..+. ++.+.+|++++
T Consensus 286 --~~~el~~~l~~~~----~~~~~~m~~n~ 309 (333)
T PRK09814 286 --SLEELPEIIDNIT----EEEYQEMVENV 309 (333)
T ss_pred --CHHHHHHHHHhcC----HHHHHHHHHHH
Confidence 7889999998753 34677777776
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.8e-17 Score=172.99 Aligned_cols=216 Identities=17% Similarity=0.153 Sum_probs=145.7
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
..+.+|.++++|+..++.+.+ .|++.+ +|.+++|++ |...+.+... .....+
T Consensus 138 ~~~~ad~~~~~s~~~~~~l~~---~G~~~~------kI~vign~v~d~~~~~~~~~------------------~~~~~~ 190 (363)
T cd03786 138 IDKLSDLHFAPTEEARRNLLQ---EGEPPE------RIFVVGNTMIDALLRLLELA------------------KKELIL 190 (363)
T ss_pred HHHHhhhccCCCHHHHHHHHH---cCCCcc------cEEEECchHHHHHHHHHHhh------------------ccchhh
Confidence 356789999999999999886 677655 899999985 5433221110 011123
Q ss_pred HHhCCCCCCCCcEEEEEccCcc---ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHC---CCceEEEecc
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY---PEKARGVAKF 466 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~---~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~---~~~v~~~~~~ 466 (612)
+.++++. +..++++.||... .||++.+++|++++.+.++++++.|.+. ..+.+++...++ .+++.+.+..
T Consensus 191 ~~~~~~~--~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~~~~~~~~~~~~v~~~~~~ 266 (363)
T cd03786 191 ELLGLLP--KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIREAGLEFLGHHPNVLLISPL 266 (363)
T ss_pred hhcccCC--CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHHHHHhhccCCCCEEEECCc
Confidence 5667753 3367788999874 7999999999999854457776666555 444555544443 2457666544
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCcceEEecccccccccCCCCCHHHHHH
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~ 545 (612)
....+..+++.||++|.+|- | ++.|||++|+|+|+++. +..++.++.|. +.. ...|++++++
T Consensus 267 ~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~-~~~-----------~~~~~~~i~~ 329 (363)
T cd03786 267 GYLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESGT-NVL-----------VGTDPEAILA 329 (363)
T ss_pred CHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhheee-EEe-----------cCCCHHHHHH
Confidence 56677789999999999984 4 57999999999999975 44566666543 332 2347999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 583 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~ 583 (612)
+|.+++++ +.....|. ...|.--+.+++..++
T Consensus 330 ~i~~ll~~--~~~~~~~~----~~~~~~~~a~~~I~~~ 361 (363)
T cd03786 330 AIEKLLSD--EFAYSLMS----INPYGDGNASERIVEI 361 (363)
T ss_pred HHHHHhcC--chhhhcCC----CCCCCCCHHHHHHHHH
Confidence 99999987 44444443 2334433444554443
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-16 Score=168.72 Aligned_cols=218 Identities=17% Similarity=0.118 Sum_probs=145.0
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (612)
..+.+|.++++|+..++.+.+ .|+ ++.++.|.+..... +.. .+..+++
T Consensus 131 ~~~~~d~i~~~~~~~~~~~~~---~g~---------~~~~~G~p~~~~~~-~~~-------------------~~~~~~~ 178 (380)
T PRK00025 131 IAKATDHVLALFPFEAAFYDK---LGV---------PVTFVGHPLADAIP-LLP-------------------DRAAARA 178 (380)
T ss_pred HHHHHhhheeCCccCHHHHHh---cCC---------CeEEECcCHHHhcc-ccc-------------------ChHHHHH
Confidence 467889999999998888775 332 34444444432111 100 1456778
Q ss_pred HhCCCCCCCCcEE-EEEc-cCccc-cCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC-CCceEEEeccC
Q 007212 394 EVGLPVDRNIPVI-GFIG-RLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFN 467 (612)
Q Consensus 394 ~~gl~~~~~~~~i-~~iG-rl~~~-Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~-~~~v~~~~~~~ 467 (612)
+++++.+. +++ ++.| |..+. ++++.+++|++.+.+ ++++++++|.+. ..++.++++..+. +..+.. +.
T Consensus 179 ~l~~~~~~--~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~v~~---~~ 252 (380)
T PRK00025 179 RLGLDPDA--RVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-KRREQIEEALAEYAGLEVTL---LD 252 (380)
T ss_pred HcCCCCCC--CEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh-hhHHHHHHHHhhcCCCCeEE---Ec
Confidence 88887543 554 4445 44444 457999999998864 589999987632 2445566655554 322332 22
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-----------------CCCCcccceecCc--ceEEeccc
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-----------------STGGLVDTVEEGF--TGFQMGSF 528 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-----------------~~gg~~e~v~~g~--~G~~~~~~ 528 (612)
++...+|+.||++|.+| |.+.+|||++|+|+|++ +.+++++++.++. .+++
T Consensus 253 -~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---- 322 (380)
T PRK00025 253 -GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELL---- 322 (380)
T ss_pred -ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhc----
Confidence 35668999999999987 88999999999999987 4566677776653 3443
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHH
Q 007212 529 SVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 529 ~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
++..|++++++.+.+++++ ++.+++|++++ ..+.. -...+++..+.+.++.
T Consensus 323 ------~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 323 ------QEEATPEKLARALLPLLAD--GARRQALLEGFTELHQQL-RCGADERAAQAVLELL 375 (380)
T ss_pred ------CCCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 3778999999999999998 77777887775 33333 3345566666555544
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.2e-16 Score=167.92 Aligned_cols=437 Identities=19% Similarity=0.237 Sum_probs=225.3
Q ss_pred ccccHHHHhhchHHHHHhC-CCeEEEEEecCCcccc----ccCccEE-EE---EEeCCeeeEEEEEEeeecCceEEE-Ee
Q 007212 99 KTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQYKD----AWDTDVV-IE---LKVGDKIEKVRFFHCHKRGVDRVF-VD 168 (612)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~~~~~~~----~~~~~~~-~~---~~~~~~~~~~~~~~~~~~gv~~~~-v~ 168 (612)
+.||+-+|+..=|+.+++. |.+..+|.|...+... ..+.... +. .......-.+++-+..++|.+++. +|
T Consensus 9 KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~~e~e~~e~~~~~l~~~~~~~~~~Gl~v~~GRWlI~G~P~vIL~D 88 (633)
T PF05693_consen 9 KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNARTEVEEIEPDNPLLKDALESMREEGLKVRYGRWLIPGRPIVILFD 88 (633)
T ss_dssp -SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHHHHEEE--SSSGGHHHHHHHHHHTT-EEEEEEESSTT--EEEEEE
T ss_pred ccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccCCCCCcCCCCCHHHHHHHHHHHhCCCeEEEeceeECCcCeEEEEe
Confidence 6899999999988888875 8889999886543211 0000000 00 000011123555666777877664 45
Q ss_pred Ccccccc-------ccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc
Q 007212 169 HPWFLAK-------VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS 241 (612)
Q Consensus 169 ~~~~~~~-------~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~ 241 (612)
...++.+ .|-..+-. .+..+.||.+ ...|...+...++.+..... .++.||.|+|+|+++
T Consensus 89 ~~s~~~~ldeik~~lW~~~gId--S~~~~~dyne-a~~Fgyava~fi~~f~~~~~----------~~~~ViaHfHEWmaG 155 (633)
T PF05693_consen 89 FGSFFWKLDEIKGELWELFGID--SPHGDGDYNE-AVMFGYAVAWFIEEFYKFYE----------EKPKVIAHFHEWMAG 155 (633)
T ss_dssp GGGGGGGHHHHHHHHHHHH-------TT-HHHHH-HHHHHHHHHHHHHHHHHH-S-----------SEEEEEEEESGGGT
T ss_pred CchHHHHHHHHHHHHHHHcCCC--CCCCCcchhH-HHHHHHHHHHHHHHHHHhhc----------CCCcEEEEechHhHh
Confidence 5443322 44211100 0111112221 12233333333333333221 146899999999999
Q ss_pred chHHHHHhhhcCCCCcCCceEEEEEecCCccccc-CcccccccCCCcccccccccccCCC---CCcCCchhHHHHHHHhh
Q 007212 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYN---KPVRGRKINWMKAGILE 317 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~k~~l~~ 317 (612)
....+++... ..+..|||.|.... ||. +... ..+...+...++-. ++-..-+...++.+...
T Consensus 156 ~gll~lr~~~------~~VaTvFTTHAT~l-GR~l~~~~-------~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~ 221 (633)
T PF05693_consen 156 VGLLYLRKRK------PDVATVFTTHATLL-GRYLAANN-------KDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHY 221 (633)
T ss_dssp THHHHHHHTT-------SCEEEEEESS-HH-HHHHTTTS-------S-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHH
T ss_pred HHHHHHhccC------CCeeEEEEecccch-hhHhhcCC-------CcHHHHhhccCccccccCccchHHHHHHHHHHHh
Confidence 9999988764 58899999997754 432 1100 00111111000000 00011245667888999
Q ss_pred CCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHH----H
Q 007212 318 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ----A 393 (612)
Q Consensus 318 ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~----~ 393 (612)
||.+.|||+-.+.+.... .+.. .=.|+|||++...|..... ....+...|+.+. .
T Consensus 222 AdvFTTVSeITa~Ea~~L--L~r~--------pDvV~pNGl~v~~~~~~~e-----------fqnl~~~~k~ki~~fv~~ 280 (633)
T PF05693_consen 222 ADVFTTVSEITAKEAEHL--LKRK--------PDVVTPNGLNVDKFPALHE-----------FQNLHAKAKEKIHEFVRG 280 (633)
T ss_dssp SSEEEESSHHHHHHHHHH--HSS----------SEE----B-GGGTSSTTH-----------HHHHHHHHHHHHHHHHHH
T ss_pred cCeeeehhhhHHHHHHHH--hCCC--------CCEEcCCCccccccccchH-----------HHHHHHHHHHHHHHHHHH
Confidence 999999999999887741 2222 3367899999987754421 0111222333332 2
Q ss_pred Hh-CC-CCC-CCCcEEEEEccCc-cccCHHHHHHHHHhccc------CCe---EEEEEecCC--------------hhHH
Q 007212 394 EV-GL-PVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK------ENV---QIIVLGTGK--------------KPME 446 (612)
Q Consensus 394 ~~-gl-~~~-~~~~~i~~iGrl~-~~Kg~d~li~A~~~l~~------~~~---~lvivG~g~--------------~~~~ 446 (612)
.+ |. .-+ ++..+|...||.+ .+||+|.+|+|+..|.. .+. -|+|+=... +.+.
T Consensus 281 ~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~ 360 (633)
T PF05693_consen 281 HFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLR 360 (633)
T ss_dssp HSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHH
T ss_pred HhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHH
Confidence 22 21 112 2345777799998 79999999999998843 232 344432210 0000
Q ss_pred -------------------------------------------------------------------HHHHHHHHHC---
Q 007212 447 -------------------------------------------------------------------KQLEQLEILY--- 456 (612)
Q Consensus 447 -------------------------------------------------------------------~~l~~l~~~~--- 456 (612)
..++++...+
T Consensus 361 ~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~ 440 (633)
T PF05693_consen 361 DTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPE 440 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCC
Confidence 0111111111
Q ss_pred -CCceEEEeccCh-------HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec-----CcceE
Q 007212 457 -PEKARGVAKFNI-------PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-----GFTGF 523 (612)
Q Consensus 457 -~~~v~~~~~~~~-------~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-----g~~G~ 523 (612)
..+|.+++.|.. -...+++.+||+.|+||.+||+|.+.+|+.++|+|.|+|+..|+..++.+ ...|+
T Consensus 441 drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV 520 (633)
T PF05693_consen 441 DRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGV 520 (633)
T ss_dssp -SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTE
T ss_pred CceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcE
Confidence 124555555511 11236899999999999999999999999999999999999998766654 23565
Q ss_pred EecccccccccCCCCCHHHHHHHHHHHHHhh---CHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 524 QMGSFSVDCEAVDPVDVAAVSTTVRRALATY---GTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 524 ~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~---~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
.+-.. ...+.++.++.|.+.+.+. .+.++..+..++ +++.++|+.....|.+.|..++..
T Consensus 521 ~VvdR-------~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~~ 585 (633)
T PF05693_consen 521 YVVDR-------RDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLALRR 585 (633)
T ss_dssp EEE-S-------SSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHHH
T ss_pred EEEeC-------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 54111 2245555555555555433 123333443333 679999999999999999987754
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=170.11 Aligned_cols=200 Identities=20% Similarity=0.157 Sum_probs=141.7
Q ss_pred hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHHHHHH
Q 007212 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 394 (612)
+.+|.++++|+..++.+.+ .|++.+ +|.+++|++ |...+.+.. .....++++
T Consensus 140 ~~ad~~~~~s~~~~~~l~~---~G~~~~------~I~vign~~~d~~~~~~~~------------------~~~~~~~~~ 192 (365)
T TIGR00236 140 HIADLHFAPTEQAKDNLLR---ENVKAD------SIFVTGNTVIDALLTNVEI------------------AYSSPVLSE 192 (365)
T ss_pred HHHHhccCCCHHHHHHHHH---cCCCcc------cEEEeCChHHHHHHHHHhh------------------ccchhHHHh
Confidence 3589999999999999986 687765 899999996 432221110 002344555
Q ss_pred hCCCCCCCCcEEEEEc-cCc-cccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHH
Q 007212 395 VGLPVDRNIPVIGFIG-RLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 395 ~gl~~~~~~~~i~~iG-rl~-~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 470 (612)
++. +.+++++.+ |.+ ..||++.+++|+.++.+ +++++++.|.+.....+.+.+.. ...+++.+........
T Consensus 193 ~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 267 (365)
T TIGR00236 193 FGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLD 267 (365)
T ss_pred cCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHH
Confidence 652 124555555 543 45899999999999854 58899988655433333333322 2334677777666666
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
...+++.||+++.+| |..++|||++|+|+|++ +.|+..+++.++ .++++ +.|++++++++.+
T Consensus 268 ~~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-----------~~d~~~i~~ai~~ 330 (365)
T TIGR00236 268 FLNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-----------GTDKENITKAAKR 330 (365)
T ss_pred HHHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-----------CCCHHHHHHHHHH
Confidence 668999999999887 66789999999999996 678888888766 45542 4799999999999
Q ss_pred HHHhhCHHHHHHHHHHH
Q 007212 550 ALATYGTQALAEMMKNG 566 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~ 566 (612)
++++ ++.+++++.+.
T Consensus 331 ll~~--~~~~~~~~~~~ 345 (365)
T TIGR00236 331 LLTD--PDEYKKMSNAS 345 (365)
T ss_pred HHhC--hHHHHHhhhcC
Confidence 9987 66666666554
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.6e-16 Score=180.89 Aligned_cols=297 Identities=17% Similarity=0.206 Sum_probs=202.3
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|.+||+|..++|.+++... .++++-|.+|-..+.. ..|..+- ...
T Consensus 233 D-~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHiPFPs~----Eifr~LP----------------------~r~ 279 (934)
T PLN03064 233 D-VVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHTPFPSS----EIHRTLP----------------------SRS 279 (934)
T ss_pred C-EEEEecchhhHHHHHHHHhC------CCCcEEEEecCCCCCh----HHHhhCC----------------------cHH
Confidence 6 59999999999999999874 6889999999543311 1111111 123
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcC--CCccc--hhhh---hccCeEEeeCCccCCCcCCCcccccccccCcchhhh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 382 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G~~~--~~~~---~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~ 382 (612)
-+-.++..||.|-+.+..+++.+.+... .|.+. ..+. +..++.++|-|||++.|...... .
T Consensus 280 elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~------------~ 347 (934)
T PLN03064 280 ELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET------------P 347 (934)
T ss_pred HHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC------------h
Confidence 3455788999999999999988875221 12211 1111 12257788999999888543210 0
Q ss_pred ccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CC----eEEEEEe-----cCC--hhHHHHH
Q 007212 383 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLG-----TGK--KPMEKQL 449 (612)
Q Consensus 383 ~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~----~~lvivG-----~g~--~~~~~~l 449 (612)
.-....+.+++.++ ++.+|++++|++..||+...++|++.+.+ |+ +.|+-+. +++ .+++.++
T Consensus 348 ~v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V 422 (934)
T PLN03064 348 QVQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQV 422 (934)
T ss_pred hHHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHH
Confidence 00112345666664 44799999999999999999999998754 43 3444333 222 2344555
Q ss_pred HHHHHHCCCc--------eEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC----ceEEcCCCCcccce
Q 007212 450 EQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT----VPIVASTGGLVDTV 516 (612)
Q Consensus 450 ~~l~~~~~~~--------v~~~~-~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~----PvI~s~~gg~~e~v 516 (612)
.++..+.+.+ +.++. .++.+++..+|+.||++++||..||++++.+|||+|+. ++|.|...|..+.+
T Consensus 423 ~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L 502 (934)
T PLN03064 423 HEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL 502 (934)
T ss_pred HHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh
Confidence 5554432211 22222 24677788899999999999999999999999999954 55668888888777
Q ss_pred ecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHHH
Q 007212 517 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 517 ~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
+..++++ +|.|+++++++|.++++.+ .++++++.++. ....+||..-++.+++-+.....
T Consensus 503 --~~~AllV----------NP~D~~~vA~AI~~AL~M~-~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~ 564 (934)
T PLN03064 503 --GAGAILV----------NPWNITEVAASIAQALNMP-EEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVV 564 (934)
T ss_pred --CCceEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHh
Confidence 3357765 9999999999999999963 33444443333 46779999999998887776653
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-15 Score=156.47 Aligned_cols=223 Identities=28% Similarity=0.449 Sum_probs=169.9
Q ss_pred hCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhC
Q 007212 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 396 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 396 (612)
..+.+++.+......+.. .+. ..++.+++|+++...+.+. ..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~---------------------------~~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEA---LGV-------PNKIVVIPNGIDTEKFAPA---------------------------RIG 192 (381)
T ss_pred cccEEEECCHHHHHHHHH---hCC-------CCCceEecCCcCHHHcCcc---------------------------ccC
Confidence 478899999988666554 221 1168889999998877542 011
Q ss_pred CCCCCCCcEEEEEccCccccCHHHHHHHHHhcccC--CeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHH
Q 007212 397 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAH 472 (612)
Q Consensus 397 l~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~--~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~ 472 (612)
+..+.....++++||+.+.||++.+++++..+... ++.++++|.++.. ...+.++..+.. .++.+.+..+.++..
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFLGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEecccCHHHHH
Confidence 22111136999999999999999999999999763 4899999998743 223333444332 457776666656666
Q ss_pred HHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
.+++.||++++||.+|++|++++|||++|+|+|+++.++..+++.++.+|+++ .+.|.+++++++..+++
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~i~~~~~ 341 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV----------PPGDVEELADALEQLLE 341 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEec----------CCCCHHHHHHHHHHHhc
Confidence 78999999999999999999999999999999999999999999998778843 66689999999999998
Q ss_pred hhCHHHHHHHHH---HHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMK---NGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 553 ~~~~~~~~~~~~---~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
+ .+.++.+.. +.....|+|+..++++.+++.....
T Consensus 342 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 342 D--PELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred C--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 8 344455543 2234799999999999999987753
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-14 Score=143.49 Aligned_cols=223 Identities=15% Similarity=0.160 Sum_probs=168.2
Q ss_pred hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHh
Q 007212 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 395 (612)
..+|.+++.|......+.+. .+. ....+|+...+++.+ .+..
T Consensus 221 ~~ad~vm~NssWT~nHI~qi--W~~--------~~~~iVyPPC~~e~l----------------------------ks~~ 262 (465)
T KOG1387|consen 221 SKADIVMTNSSWTNNHIKQI--WQS--------NTCSIVYPPCSTEDL----------------------------KSKF 262 (465)
T ss_pred ccceEEEecchhhHHHHHHH--hhc--------cceeEEcCCCCHHHH----------------------------HHHh
Confidence 47899999999988888762 221 266777766665433 2223
Q ss_pred CCCCCCCCcEEEEEccCccccCHH-HHHHHHHhccc------CCeEEEEEecCC----hhHHHHHHHHHHHC--CCceEE
Q 007212 396 GLPVDRNIPVIGFIGRLEEQKGSD-ILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILY--PEKARG 462 (612)
Q Consensus 396 gl~~~~~~~~i~~iGrl~~~Kg~d-~li~A~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~--~~~v~~ 462 (612)
+. ++.+.+.++++|.+.|.|+.. +-++|+-.... ++++|+|+|+-. .+.-+.+++++..+ +.++.+
T Consensus 263 ~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F 341 (465)
T KOG1387|consen 263 GT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQF 341 (465)
T ss_pred cc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEE
Confidence 33 334558999999999999999 33444444433 479999999843 34556667777654 467888
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc-cceec---CcceEEecccccccccCCCC
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~v~~---g~~G~~~~~~~~~~~~v~~~ 538 (612)
....+-+.+-.++..|.+.|..-..|-||+.+.|+||+|+.+|+.+.||.. |+|.+ ..+||++ .
T Consensus 342 ~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla------------~ 409 (465)
T KOG1387|consen 342 EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLA------------P 409 (465)
T ss_pred EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeec------------C
Confidence 888888888899999999999999999999999999999999999988755 67764 3579964 6
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHHHHHHHc
Q 007212 539 DVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 539 d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
+.++.++++.+++... .+.+..|++++. ..+|+-....+.|...+..++.+
T Consensus 410 t~~EYaE~iLkIv~~~-~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 410 TDEEYAEAILKIVKLN-YDERNMMRRNARKSLARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred ChHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhcc
Confidence 7889999999999873 334666666663 57899999999999888888753
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-12 Score=130.07 Aligned_cols=299 Identities=17% Similarity=0.224 Sum_probs=187.2
Q ss_pred CCcEEEEeCC-CcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCc
Q 007212 228 KKNVVFVAND-WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvVi~~h~-~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
.||.|++-|- -...++.|++.... ++++.+++.||..|. . .++ +..|...|+. +
T Consensus 103 ~~~~ilvQNPP~iPtliv~~~~~~l------~~~KfiIDWHNy~Ys-l-------~l~----------~~~g~~h~lV-~ 157 (444)
T KOG2941|consen 103 PPDIILVQNPPSIPTLIVCVLYSIL------TGAKFIIDWHNYGYS-L-------QLK----------LKLGFQHPLV-R 157 (444)
T ss_pred CCcEEEEeCCCCCchHHHHHHHHHH------hcceEEEEehhhHHH-H-------HHH----------hhcCCCCchH-H
Confidence 5797555542 11223444444332 699999999998873 0 000 1111111221 2
Q ss_pred hhHHH-HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCcc-----CCC----cCCCcccccccccC
Q 007212 307 KINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD-----VQE----WNPLTDKYIGVKYD 376 (612)
Q Consensus 307 ~~~~~-k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd-----~~~----~~p~~~~~~~~~~~ 376 (612)
...|. +..-+.||.-+||++.+++++.+. .|+. +..+++.-.. .+. |.+.. ..++
T Consensus 158 l~~~~E~~fgk~a~~nLcVT~AMr~dL~qn--Wgi~--------ra~v~YDrPps~~~~l~~~H~lf~~l~-----~d~~ 222 (444)
T KOG2941|consen 158 LVRWLEKYFGKLADYNLCVTKAMREDLIQN--WGIN--------RAKVLYDRPPSKPTPLDEQHELFMKLA-----GDHS 222 (444)
T ss_pred HHHHHHHHhhcccccchhhHHHHHHHHHHh--cCCc--------eeEEEecCCCCCCCchhHHHHHHhhhc-----cccc
Confidence 23333 444567999999999999988863 5543 3444543211 111 11111 1111
Q ss_pred cch--hhhccHHHHHHHHHHhC---CCCCCC-CcEEEEEccCccccCHHHHHHHHHhcc-----c----CCeEEEEEecC
Q 007212 377 AST--VMDAKPLLKEALQAEVG---LPVDRN-IPVIGFIGRLEEQKGSDILAAAIPHFI-----K----ENVQIIVLGTG 441 (612)
Q Consensus 377 ~~~--~~~~~~~~~~~l~~~~g---l~~~~~-~~~i~~iGrl~~~Kg~d~li~A~~~l~-----~----~~~~lvivG~g 441 (612)
+-. ..+.+..+..++-++.. ..-.++ ..+++..-.+++..++.+|++|+.... + |++-++|-|.|
T Consensus 223 ~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKG 302 (444)
T KOG2941|consen 223 PFRAREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKG 302 (444)
T ss_pred hhhhcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCC
Confidence 111 12334444444444443 000112 246777777999999999999998442 1 57778888888
Q ss_pred C--hhHHHHHHHHHHHCCCceEE-EeccChHHHHHHHHhccEEEEcCCC---CCCcHHHHHHHHcCCceEEcCCCCcccc
Q 007212 442 K--KPMEKQLEQLEILYPEKARG-VAKFNIPLAHMIIAGADFILIPSRF---EPCGLIQLHAMRYGTVPIVASTGGLVDT 515 (612)
Q Consensus 442 ~--~~~~~~l~~l~~~~~~~v~~-~~~~~~~~~~~i~~~aDv~v~pS~~---E~~gl~~lEAma~G~PvI~s~~gg~~e~ 515 (612)
+ +.|.+++++...+ ++.+ .++...++.+.+++.||+.|.--.. --.|+++++-.-||+||++-+...+.|+
T Consensus 303 PlkE~Y~~~I~~~~~~---~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~EL 379 (444)
T KOG2941|consen 303 PLKEKYSQEIHEKNLQ---HVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDEL 379 (444)
T ss_pred chhHHHHHHHHHhccc---ceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHH
Confidence 8 3444444444332 3443 3444778888999999997754332 3479999999999999999999999999
Q ss_pred eecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC--HHHHHHHHHHHH-HhhcCcHHHHHHHH
Q 007212 516 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGM-AQDLSWKGPAKKWE 581 (612)
Q Consensus 516 v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~--~~~~~~~~~~~~-~~~fsw~~~a~~~~ 581 (612)
|+|+.||++| .|.++|++.++.+.++.. ...+.++.++.. .+...|+...++..
T Consensus 380 Vkh~eNGlvF------------~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 380 VKHGENGLVF------------EDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQELRWDESWERTA 436 (444)
T ss_pred HhcCCCceEe------------ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHHHHHHhh
Confidence 9999999988 899999999999999542 367777777775 46677776655443
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.5e-15 Score=133.67 Aligned_cols=130 Identities=29% Similarity=0.378 Sum_probs=94.5
Q ss_pred CcEEEEEccCccccCHHHHHH-HHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 403 IPVIGFIGRLEEQKGSDILAA-AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~-A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
.++|+++|++.+.|+++.+++ +++++.+ ++++|+|+|.+++ +++++ .. .++.+.+.. ++...+++.||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~----~l~~~-~~--~~v~~~g~~--~e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD----ELKRL-RR--PNVRFHGFV--EELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-----HHCCH-HH--CTEEEE-S---HHHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH----HHHHh-cC--CCEEEcCCH--HHHHHHHHhCC
Confidence 378999999999999999999 9998865 7999999999875 24444 22 258888887 46778999999
Q ss_pred EEEEcCC-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 480 FILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 v~v~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+++.|+. .++++.+++|||++|+|+|+++. +..+++.....|.. -.+|+++++++|.++++|
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~-----------~~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVL-----------VANDPEELAEAIERLLND 135 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE------------TT-HHHHHHHHHHHHH-
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEE-----------ECCCHHHHHHHHHHHhcC
Confidence 9999997 57899999999999999999999 56777765556664 378999999999999875
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.4e-12 Score=135.47 Aligned_cols=191 Identities=15% Similarity=0.079 Sum_probs=120.3
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
+...+.+|.+++.++...+.+.. .|. +..++.|++-........ .+...
T Consensus 133 r~l~~~~d~v~~~~~~e~~~~~~---~g~---------~~~~vGnPv~~~~~~~~~-------------------~~~~~ 181 (385)
T TIGR00215 133 KKIEKATDFLLAILPFEKAFYQK---KNV---------PCRFVGHPLLDAIPLYKP-------------------DRKSA 181 (385)
T ss_pred HHHHHHHhHhhccCCCcHHHHHh---cCC---------CEEEECCchhhhccccCC-------------------CHHHH
Confidence 44567899999999998887764 332 455666766322111001 14556
Q ss_pred HHHhCCCCCCCCcEEEEE-c-cCcc-ccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEe
Q 007212 392 QAEVGLPVDRNIPVIGFI-G-RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVA 464 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~i-G-rl~~-~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~ 464 (612)
+++++++.+ .++|+++ | |..+ .|++..+++|++.+.+ +++++++.+.... ..+.++++...+ +..+..+.
T Consensus 182 r~~lgl~~~--~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~~ 258 (385)
T TIGR00215 182 REKLGIDHN--GETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLID 258 (385)
T ss_pred HHHcCCCCC--CCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEEC
Confidence 778888754 3666655 3 7766 7999999999999865 5788877654321 233444444433 22343332
Q ss_pred ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC-CCCccc----------------ceecCcceEEecc
Q 007212 465 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVD----------------TVEEGFTGFQMGS 527 (612)
Q Consensus 465 ~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e----------------~v~~g~~G~~~~~ 527 (612)
. ....+|++||++|.+| |.+.+|+|++|+|+|+.. ++.+.- ++.+. +. +++
T Consensus 259 ---~-~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~--~~-~pe 326 (385)
T TIGR00215 259 ---G-DARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR--LL-VPE 326 (385)
T ss_pred ---c-hHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC--cc-chh
Confidence 2 2346999999999999 788889999999998872 222221 12211 11 111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHh
Q 007212 528 FSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+ +-+..+++.+++.+.+++++
T Consensus 327 l-----~q~~~~~~~l~~~~~~ll~~ 347 (385)
T TIGR00215 327 L-----LQEECTPHPLAIALLLLLEN 347 (385)
T ss_pred h-----cCCCCCHHHHHHHHHHHhcC
Confidence 1 11445789999999999987
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-12 Score=144.39 Aligned_cols=162 Identities=13% Similarity=0.079 Sum_probs=133.4
Q ss_pred cEEEEEc--cCccccCHHHHHHHHHhccc--CCeEEEEEecCCh-hHHHHHHHHHHHC--C-------------------
Q 007212 404 PVIGFIG--RLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-PMEKQLEQLEILY--P------------------- 457 (612)
Q Consensus 404 ~~i~~iG--rl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~-~~~~~l~~l~~~~--~------------------- 457 (612)
..+++++ || +.|.++.+|+|+.++.. |+++|.+.|.+.. .+.+.++++..++ .
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPI 398 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhc
Confidence 4788888 99 99999999999999954 8999999998863 3444554443322 1
Q ss_pred ----------CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecc
Q 007212 458 ----------EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 527 (612)
Q Consensus 458 ----------~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~ 527 (612)
..+.+.+..+...+...+..+.++|.+|..|+++ .++||+++|+|+| .-|..++|.++.||+++
T Consensus 399 ~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li-- 472 (519)
T TIGR03713 399 LQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYII-- 472 (519)
T ss_pred ccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEe--
Confidence 2344444345546668999999999999999999 9999999999999 44569999999999975
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHH
Q 007212 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETL 584 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y 584 (612)
+|..+|+++|..+|.+ .+.+.++...++ .++||-+.+.++|.+++
T Consensus 473 ----------~d~~~l~~al~~~L~~--~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 473 ----------DDISELLKALDYYLDN--LKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred ----------CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 8999999999999998 788888888884 69999999999998863
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.2e-12 Score=136.00 Aligned_cols=295 Identities=15% Similarity=0.124 Sum_probs=200.9
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|-.||+|..++|.+++.+. .+.++-|.+|-..+.. +.|..+ | ...
T Consensus 125 D-~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHiPFPs~----eifr~L--P--------------------~r~ 171 (474)
T PRK10117 125 D-IIWIHDYHLLPFASELRKRG------VNNRIGFFLHIPFPTP----EIFNAL--P--------------------PHD 171 (474)
T ss_pred C-EEEEeccHhhHHHHHHHHhC------CCCcEEEEEeCCCCCh----HHHhhC--C--------------------ChH
Confidence 6 59999999999999999875 6889999999543311 111111 1 113
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCc--CCCccch---hhh---hccCeEEeeCCccCCCcCCCcccccccccCcchhh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGE--DKGVELD---NII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 381 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~G~~~~---~~~---~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~ 381 (612)
.+-.++..+|.|-+.+..+++.+.+.. ..|.+.. .+. +..++.+.|-|||++.|......
T Consensus 172 eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~------------ 239 (474)
T PRK10117 172 ELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG------------ 239 (474)
T ss_pred HHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc------------
Confidence 345678899999999999998877521 1122110 000 22367888999998877432110
Q ss_pred hccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCC-------hhHHHH
Q 007212 382 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK-------KPMEKQ 448 (612)
Q Consensus 382 ~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~-------~~~~~~ 448 (612)
. .......+++.++ ++.+|+-+.|++..||+..=++|++.+.+ .++.|+-+.... .++..+
T Consensus 240 ~-~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~ 313 (474)
T PRK10117 240 P-LPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQ 313 (474)
T ss_pred h-HHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHH
Confidence 0 0111344566554 34699999999999999999999999875 367788776543 245556
Q ss_pred HHHHHHH----CCC----ceEEE-eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC-----ceEEcCCCCccc
Q 007212 449 LEQLEIL----YPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGLVD 514 (612)
Q Consensus 449 l~~l~~~----~~~----~v~~~-~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~~e 514 (612)
++++..+ ++. -+.+. -.++.+++..+|..||++++++..+|+.++..|+.+|-. +.|.|...|..+
T Consensus 314 v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~ 393 (474)
T PRK10117 314 LETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN 393 (474)
T ss_pred HHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchHH
Confidence 6655544 321 12211 124667777899999999999999999999999999965 378888877777
Q ss_pred ceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhcCcHHHHHHHHHHHHHHH
Q 007212 515 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 515 ~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
.+.+ .++ |+|.|.++++++|.++|+.+..+...++.... ....++-..-++.+++-+..+.
T Consensus 394 ~L~~---All----------VNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 394 ELTS---ALI----------VNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred HhCC---CeE----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 7642 454 59999999999999999996444444443322 4566777777777777666554
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.1e-11 Score=135.11 Aligned_cols=295 Identities=18% Similarity=0.215 Sum_probs=168.5
Q ss_pred CcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchh
Q 007212 229 KNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 308 (612)
Q Consensus 229 pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (612)
-| +|..||+|..++|.+++... +++++.|.+|...+.. +.|..+ ...
T Consensus 142 ~D-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiPFPs~----e~fr~l----------------------P~r 188 (474)
T PF00982_consen 142 GD-LVWVHDYHLMLLPQMLRERG------PDARIGFFLHIPFPSS----EIFRCL----------------------PWR 188 (474)
T ss_dssp T--EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S----H----HHHTTS----------------------TTH
T ss_pred CC-EEEEeCCcHHHHHHHHHhhc------CCceEeeEEecCCCCH----HHHhhC----------------------CcH
Confidence 36 59999999999999999875 6899999999543311 111111 122
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCc--CCCccchhh---h----hccCeEEeeCCccCCCcCCCcccccccccCcch
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDNI---I----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~G~~~~~~---~----~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
..+-.++..||.|-+.+..+++.+.+.. ..|.+...- + +...+.+.|-|||++.+......
T Consensus 189 ~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~---------- 258 (474)
T PF00982_consen 189 EEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS---------- 258 (474)
T ss_dssp HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-----------
T ss_pred HHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC----------
Confidence 3455678899999999999998876421 222221110 0 12357778888888766321100
Q ss_pred hhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCC----h---hHH
Q 007212 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---PME 446 (612)
Q Consensus 380 ~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~----~---~~~ 446 (612)
..-......++++++- +..+|+-+.|++..||+..=++|++++.+ .++.|+-++... + ++.
T Consensus 259 --~~v~~~~~~l~~~~~~----~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~ 332 (474)
T PF00982_consen 259 --PEVQERAEELREKFKG----KRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELR 332 (474)
T ss_dssp --S---HHHHHHHHHTTT-----SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHH
T ss_pred --hHHHHHHHHHHHhcCC----CcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHH
Confidence 0011123456666641 24799999999999999999999999865 368888777532 1 344
Q ss_pred HHHHHHHH----HCCC----ceEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc----eEEcCCCCcc
Q 007212 447 KQLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLV 513 (612)
Q Consensus 447 ~~l~~l~~----~~~~----~v~~~~-~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~ 513 (612)
.+++++.. +++. -|.++. .++.++...+|..||+++++|..+|+.++..|+.+|... +|.|...|..
T Consensus 333 ~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa 412 (474)
T PF00982_consen 333 REVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAA 412 (474)
T ss_dssp HHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGG
T ss_pred HHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHH
Confidence 45554443 3431 133333 356677778999999999999999999999999998665 7888888888
Q ss_pred cceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhcCcHHHHHHHHHHH
Q 007212 514 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 514 e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~~y 584 (612)
+.+.++ .++ |+|.|++++|++|.++|+.+..++..++.+.. ....++-..-++.+++-+
T Consensus 413 ~~L~~~--al~----------VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 413 EQLSEA--ALL----------VNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp GT-TTS---EE----------E-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred HHcCCc--cEE----------ECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHh
Confidence 877653 254 49999999999999999985333333332222 345566665555555543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1e-11 Score=138.06 Aligned_cols=433 Identities=20% Similarity=0.226 Sum_probs=273.6
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEecCCc-cc-------------cccC--------------ccEEEEEEeCC-eee
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YK-------------DAWD--------------TDVVIELKVGD-KIE 150 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~-~~-------------~~~~--------------~~~~~~~~~~~-~~~ 150 (612)
.||+|...+.....++..|...+.++-+|.+ +. +.|. ....+.+...+ +..
T Consensus 114 gGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~~~~~ 193 (750)
T COG0058 114 GGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYDNRVV 193 (750)
T ss_pred cccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEeccCcEE
Confidence 4999999999999999999998888877642 22 1121 11223444445 667
Q ss_pred EEEEEEeeecCceEEEEeCccccccccCC-CCCcccCCCCCCCCchhhHHH---HHHHHHHHHHhhhhc-cCCCCccCCC
Q 007212 151 KVRFFHCHKRGVDRVFVDHPWFLAKVWGK-TQSKIYGPRTGEDYQDNQLRF---SLLCQAALEAPRILN-LNSNKYFSGP 225 (612)
Q Consensus 151 ~~~~~~~~~~gv~~~~v~~~~~~~~~~g~-~~~~~y~~~~g~~~~~~~~r~---~~~~~~~~~~~~~l~-~~~~~~~~~~ 225 (612)
.+|.|......+++++.+...--.+.|.+ --..+|++.+ +.+|+ .+++.+.++.+..+. .. ..
T Consensus 194 ~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~Ds------~elRl~Qeyfl~~agvq~I~~~~~~~------~~ 261 (750)
T COG0058 194 TLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPGDS------KELRLKQEYFLGSAGVQDILARGHLE------HH 261 (750)
T ss_pred EEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCCCc------HHHHHhhhheeeeHHHHHHHHHhhhc------cc
Confidence 77888877777788877544311111111 1125676432 22332 456777777776662 11 00
Q ss_pred CCCCcEEEEeCCCcccchHHHHHh-hhcCCCC-------cCCceEEEEEecCCccc--ccCcccccccC-----CCc---
Q 007212 226 YGKKNVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLN-----LPA--- 287 (612)
Q Consensus 226 ~~~pDvVi~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~-----l~~--- 287 (612)
--+ ..+.|.||-|.+++..-+-+ +.-..|+ ....-++||.|.+.+.+ .|+...+..+- +-.
T Consensus 262 ~~~-~~~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in 340 (750)
T COG0058 262 DLD-VLADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEIN 340 (750)
T ss_pred ccc-chhhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHH
Confidence 001 33578999888877665444 2222222 12346899999887755 35544443211 000
Q ss_pred -ccccccccccCC-----CCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCc---CCCccchhhhhccCeEEeeCCc
Q 007212 288 -QFKSSFDFIDGY-----NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIVNGM 358 (612)
Q Consensus 288 -~~~~~~~~~~~~-----~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~---~~G~~~~~~~~~~~i~vI~ngv 358 (612)
.+.......... ..+.. .+++--.++..|..+..||+-+.+.+.+.. .+++. +.+|.-+.|||
T Consensus 341 ~~~l~~~~~~~~~~~~~~~~~i~--~v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~------p~~i~nvTNGI 412 (750)
T COG0058 341 ARFLPEVRLLYLGDLIRRGSPIE--EVNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLY------PEKINNVTNGI 412 (750)
T ss_pred hhhhHHHHhhccccccccCCccc--ceehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccC------ccccccccCCc
Confidence 000000000000 00000 044555577888899999998887765432 22222 34889999999
Q ss_pred cCCCcCCCcccccccccCcc--------------------------hhhhccHHHHHH----HHHHhCCCCCCCCcEEEE
Q 007212 359 DVQEWNPLTDKYIGVKYDAS--------------------------TVMDAKPLLKEA----LQAEVGLPVDRNIPVIGF 408 (612)
Q Consensus 359 d~~~~~p~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~----l~~~~gl~~~~~~~~i~~ 408 (612)
.+..|.-...+.+...++.. .+...|..++.. ...+.|+..+++...+++
T Consensus 413 t~rrWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~ 492 (750)
T COG0058 413 TPRRWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQ 492 (750)
T ss_pred CCchhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeee
Confidence 99998655444454445444 223445555543 345667888888999999
Q ss_pred EccCccccCHHHHHHHHHhccc-------CCeEEEEEecCC------hhHHHHHHHHHHHCC--CceEEEeccChHHHHH
Q 007212 409 IGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTGK------KPMEKQLEQLEILYP--EKARGVAKFNIPLAHM 473 (612)
Q Consensus 409 iGrl~~~Kg~d~li~A~~~l~~-------~~~~lvivG~g~------~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ 473 (612)
+-|+.++|...+.+.-+..+.+ +.+++++.|... +.+.+.+...+...+ .+|.|+..++...+..
T Consensus 493 ~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvslA~~ 572 (750)
T COG0058 493 ARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVSLAEL 572 (750)
T ss_pred ehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChhHHHh
Confidence 9999999988877655554432 468888888754 355666666666532 4789999999999999
Q ss_pred HHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCccccee--cCcceEEeccccccccc-----CCCC-CHHHH
Q 007212 474 IIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEA-----VDPV-DVAAV 543 (612)
Q Consensus 474 i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~~~~~~~~~~~~-----v~~~-d~~~l 543 (612)
++.+||+....|+ .|++|.+-+-+|..|.+-|+|-.|...|+.+ .+.|||+||....+.+. .++. +...+
T Consensus 573 iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~~~~~~~y~~~ 652 (750)
T COG0058 573 LIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADGYDPNALYYEL 652 (750)
T ss_pred hcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcccccHHHHHHH
Confidence 9999999999997 4999999999999999999999999999997 78999999965532211 1222 44455
Q ss_pred HHHHHHHHHh
Q 007212 544 STTVRRALAT 553 (612)
Q Consensus 544 a~~i~~ll~~ 553 (612)
...|..++..
T Consensus 653 ~~~v~~~~~~ 662 (750)
T COG0058 653 ENEVKPVLDE 662 (750)
T ss_pred hHHHHHHHHH
Confidence 5566666654
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.6e-12 Score=120.90 Aligned_cols=176 Identities=22% Similarity=0.276 Sum_probs=92.7
Q ss_pred EEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEEE
Q 007212 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (612)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (612)
|+++..++ |. .||.+.++.+|+++|+++||+|+++++......... . .. ..
T Consensus 1 ili~~~~~-~~--~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~----~-----------~~-----------~~ 51 (177)
T PF13439_consen 1 ILITNIFL-PN--IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE----L-----------VK-----------IF 51 (177)
T ss_dssp -EEECC-T-TS--SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST----E-----------EE-----------E-
T ss_pred CEEEEecC-CC--CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh----c-----------cc-----------ee
Confidence 45566554 43 899999999999999999999999998754322210 0 00 00
Q ss_pred EeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHHH
Q 007212 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCY 246 (612)
Q Consensus 167 v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~~ 246 (612)
... .+. ......+.......+.+.++.. +||+ ||+|.+........
T Consensus 52 ~~~--------------~~~------~~~~~~~~~~~~~~~~~~i~~~-------------~~Di-Vh~~~~~~~~~~~~ 97 (177)
T PF13439_consen 52 VKI--------------PYP------IRKRFLRSFFFMRRLRRLIKKE-------------KPDI-VHIHGPPAFWIALL 97 (177)
T ss_dssp --T--------------T-S------STSS--HHHHHHHHHHHHHHHH-------------T-SE-EECCTTHCCCHHHH
T ss_pred eee--------------ecc------cccccchhHHHHHHHHHHHHHc-------------CCCe-EEecccchhHHHHH
Confidence 000 000 0111112223334455555554 3796 79998666554443
Q ss_pred HHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecCH
Q 007212 247 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 326 (612)
Q Consensus 247 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~ 326 (612)
... ++|+++++|+......+ ........ ......+++...+.+|.++++|+
T Consensus 98 ~~~---------~~~~v~~~H~~~~~~~~-------~~~~~~~~-------------~~~~~~~~~~~~~~~~~ii~vS~ 148 (177)
T PF13439_consen 98 ACR---------KVPIVYTIHGPYFERRF-------LKSKLSPY-------------SYLNFRIERKLYKKADRIIAVSE 148 (177)
T ss_dssp HHH---------CSCEEEEE-HHH--HHT-------TTTSCCCH-------------HHHHHCTTHHHHCCSSEEEESSH
T ss_pred hcc---------CCCEEEEeCCCcccccc-------cccccchh-------------hhhhhhhhhhHHhcCCEEEEECH
Confidence 331 67999999975531000 00000000 00011223444788999999999
Q ss_pred HHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCc
Q 007212 327 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW 363 (612)
Q Consensus 327 ~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~ 363 (612)
..++.+.+ +|++.+ ++.+||||+|.+.|
T Consensus 149 ~~~~~l~~---~~~~~~------ki~vI~ngid~~~F 176 (177)
T PF13439_consen 149 STKDELIK---FGIPPE------KIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHHHHHH---HT--SS-------EEE----B-CCCH
T ss_pred HHHHHHHH---hCCccc------CCEEEECCccHHHc
Confidence 99999996 666544 99999999999877
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.6e-10 Score=134.04 Aligned_cols=298 Identities=14% Similarity=0.158 Sum_probs=197.2
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|..||+|..++|.+++.+. ++.++-|.+|-..+.. ..|..+ | ...
T Consensus 203 d-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiPFPs~----eifr~L--P--------------------~r~ 249 (854)
T PLN02205 203 D-FVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHSPFPSS----EIYKTL--P--------------------IRE 249 (854)
T ss_pred C-EEEEeCchhhHHHHHHHhhC------CCCcEEEEecCCCCCh----HHHhhC--C--------------------cHH
Confidence 7 59999999999999999874 6889999999543311 111111 1 123
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCc--CCCccchh-----hh----hccCeEEeeCCccCCCcCCCcccccccccCcc
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDN-----II----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 378 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~G~~~~~-----~~----~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~ 378 (612)
-+-.++..||.|-+.+..+++.+.+.. ..|.+.+. -+ +..+|.+.|-|||+..|......
T Consensus 250 eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~--------- 320 (854)
T PLN02205 250 ELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL--------- 320 (854)
T ss_pred HHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC---------
Confidence 345678899999999999999877621 12322111 00 23467888999998776432110
Q ss_pred hhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEEEEEecCC-------hhH
Q 007212 379 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KPM 445 (612)
Q Consensus 379 ~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~lvivG~g~-------~~~ 445 (612)
........+++++++- +++.+|+-+.|++..||+..=+.|++++.+ | ++.|+-+.... .++
T Consensus 321 ---~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~ 394 (854)
T PLN02205 321 ---PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEV 394 (854)
T ss_pred ---hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHH
Confidence 0001113345666542 245799999999999999999999999865 3 66777776532 234
Q ss_pred HHHHHHHHH----HCCC----ceEEE-eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC--------------
Q 007212 446 EKQLEQLEI----LYPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-------------- 502 (612)
Q Consensus 446 ~~~l~~l~~----~~~~----~v~~~-~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~-------------- 502 (612)
..++++++. +++. -|.+. -.++.+++..+|+.||++++++..+|+.++..|+.+|..
T Consensus 395 ~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~ 474 (854)
T PLN02205 395 QAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPS 474 (854)
T ss_pred HHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccc
Confidence 444455544 3431 13333 234667777899999999999999999999999998853
Q ss_pred -----ceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhcCcHHH
Q 007212 503 -----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGP 576 (612)
Q Consensus 503 -----PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~ 576 (612)
+.|.|..-|....+. ..+ +|+|.|+++++++|.++|+.+..++..++.+.. ....++-..-
T Consensus 475 ~~~~gvLiLSEfaGaa~~L~---~Ai----------~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W 541 (854)
T PLN02205 475 TPKKSMLVVSEFIGCSPSLS---GAI----------RVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYW 541 (854)
T ss_pred cCCCCceEeeeccchhHHhC---cCe----------EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 356666655555442 134 359999999999999999986444444443322 3456676666
Q ss_pred HHHHHHHHHHHH
Q 007212 577 AKKWEETLLNLE 588 (612)
Q Consensus 577 a~~~~~~y~~l~ 588 (612)
++.+++-++++.
T Consensus 542 ~~~fl~~l~~~~ 553 (854)
T PLN02205 542 ARSFLQDLERTC 553 (854)
T ss_pred HHHHHHHHHHHH
Confidence 777776666553
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.7e-12 Score=117.06 Aligned_cols=160 Identities=22% Similarity=0.227 Sum_probs=85.5
Q ss_pred ccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEEEEeCccccccccCCC
Q 007212 101 GGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180 (612)
Q Consensus 101 GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~g~~ 180 (612)
||++.++.+|+++|+++||+|+|+++..+...+. ....|++++.+..+.....
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~----- 53 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRPWP----- 53 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SSSG-----
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccchh-----
Confidence 8999999999999999999999999875433221 1234666666643321100
Q ss_pred CCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCc
Q 007212 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSA 260 (612)
Q Consensus 181 ~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~ 260 (612)
+. ..+ +......++.... .+||+ ||+|++..+++...++.. .++
T Consensus 54 ---~~-----------~~~---~~~~~~~~l~~~~-----------~~~Dv-v~~~~~~~~~~~~~~~~~-------~~~ 97 (160)
T PF13579_consen 54 ---LR-----------LLR---FLRRLRRLLAARR-----------ERPDV-VHAHSPTAGLVAALARRR-------RGI 97 (160)
T ss_dssp ---GG-----------HCC---HHHHHHHHCHHCT--------------SE-EEEEHHHHHHHHHHHHHH-------HT-
T ss_pred ---hh-----------hHH---HHHHHHHHHhhhc-----------cCCeE-EEecccchhHHHHHHHHc-------cCC
Confidence 00 001 1122222331111 35895 899987766666666533 489
Q ss_pred eEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCc
Q 007212 261 KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGV 340 (612)
Q Consensus 261 pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~ 340 (612)
|+|+++|+....... .+... ....+++..++.+|.++++|+..++.+.+ +|+
T Consensus 98 p~v~~~h~~~~~~~~--------~~~~~-----------------~~~~~~~~~~~~ad~vi~~S~~~~~~l~~---~g~ 149 (160)
T PF13579_consen 98 PLVVTVHGTLFRRGS--------RWKRR-----------------LYRWLERRLLRRADRVIVVSEAMRRYLRR---YGV 149 (160)
T ss_dssp -EEEE-SS-T--------------HHHH-----------------HHHHHHHHHHHH-SEEEESSHHHHHHHHH---H--
T ss_pred cEEEEECCCchhhcc--------chhhH-----------------HHHHHHHHHHhcCCEEEECCHHHHHHHHH---hCC
Confidence 999999964431110 00000 11234577899999999999999999997 777
Q ss_pred cchhhhhccCeEEeeCC
Q 007212 341 ELDNIIRKTGIKGIVNG 357 (612)
Q Consensus 341 ~~~~~~~~~~i~vI~ng 357 (612)
+.+ ++.+||||
T Consensus 150 ~~~------ri~vipnG 160 (160)
T PF13579_consen 150 PPD------RIHVIPNG 160 (160)
T ss_dssp -GG------GEEE----
T ss_pred CCC------cEEEeCcC
Confidence 766 99999998
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.9e-10 Score=118.73 Aligned_cols=294 Identities=19% Similarity=0.215 Sum_probs=193.1
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|..||+|..++|.+++.+. .+.++.|.+|-..+.. +.+..+- ...
T Consensus 149 D-iIWVhDYhL~L~P~mlR~~~------~~~~IgfFlHiPfPss----Evfr~lP----------------------~r~ 195 (486)
T COG0380 149 D-IIWVHDYHLLLVPQMLRERI------PDAKIGFFLHIPFPSS----EVFRCLP----------------------WRE 195 (486)
T ss_pred C-EEEEEechhhhhHHHHHHhC------CCceEEEEEeCCCCCH----HHHhhCc----------------------hHH
Confidence 7 59999999999999999875 6889999999543311 1111110 112
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcC--CC------ccchhh-hhccCeEEeeCCccCCCcCCCcccccccccCcchh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGED--KG------VELDNI-IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 380 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G------~~~~~~-~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~ 380 (612)
-+-.++..||.|-+.++.+++.+.+... .| +..... =+..++..+|-|+|+..|.-.... +.
T Consensus 196 eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~-------~~-- 266 (486)
T COG0380 196 EILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKS-------PS-- 266 (486)
T ss_pred HHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcC-------Cc--
Confidence 2345788999999999999988765321 11 111100 011367788999998877533210 00
Q ss_pred hhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCC----h---hHHH
Q 007212 381 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---PMEK 447 (612)
Q Consensus 381 ~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~----~---~~~~ 447 (612)
-.....++++.++- ++.+|+.+.|++.-||+..=+.|+++|.. .++.++-++... . .+..
T Consensus 267 ---v~~~~~el~~~~~~----~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~ 339 (486)
T COG0380 267 ---VQEKVLELKAELGR----NKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRL 339 (486)
T ss_pred ---hhhHHHHHHHHhcC----CceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHH
Confidence 00113445555542 35799999999999999999999999975 367788777754 2 2444
Q ss_pred HHHHHHH----HCCC----ceEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHc----CCceEEcCCCCccc
Q 007212 448 QLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY----GTVPIVASTGGLVD 514 (612)
Q Consensus 448 ~l~~l~~----~~~~----~v~~~~-~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~----G~PvI~s~~gg~~e 514 (612)
+++++.. +++. -+.++- ..+.+++..++..||++++++..||+.++..|+-+| +-|.|.|...|...
T Consensus 340 ~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~ 419 (486)
T COG0380 340 QIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAAS 419 (486)
T ss_pred HHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchh
Confidence 5555444 3331 122222 246677778999999999999999999999999987 34677887766666
Q ss_pred ceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhcCcHHHHHHHHHHHH
Q 007212 515 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 515 ~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~~y~ 585 (612)
.+.+ .++ |+|.|.++++++|.++|+.+..+..+++.... ....++-..-+..+++-+.
T Consensus 420 ~L~~---Ali----------VNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la 478 (486)
T COG0380 420 ELRD---ALI----------VNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLA 478 (486)
T ss_pred hhcc---CEe----------ECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 6654 454 49999999999999999985333333332222 2344565555555555444
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.4e-08 Score=103.94 Aligned_cols=168 Identities=16% Similarity=0.160 Sum_probs=95.8
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCH-HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccC
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGS-DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~-d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 467 (612)
+..++.+++..+ +++|+.+|.=.-.+.+ +.+.+++..+. .+++++++- |...+++.+.. .+ ++.. ..|.
T Consensus 173 ~~~~~~~~l~~~--~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~-G~~~~~~~~~~----~~-~~~~-~~f~ 242 (352)
T PRK12446 173 EKGLAFLGFSRK--KPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLC-GKGNLDDSLQN----KE-GYRQ-FEYV 242 (352)
T ss_pred hHHHHhcCCCCC--CcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEe-CCchHHHHHhh----cC-CcEE-ecch
Confidence 344566777643 4667666654334445 44445555553 347766542 22224443332 12 1222 2444
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC-----C----cccceecCcceEEecccccccccCCCC
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-----G----LVDTVEEGFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-----g----~~e~v~~g~~G~~~~~~~~~~~~v~~~ 538 (612)
.+.++.+|+.||++|.- +-++++.|++++|+|.|.-... + ..+.+.+...+..+ .-+.-
T Consensus 243 ~~~m~~~~~~adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l--------~~~~~ 310 (352)
T PRK12446 243 HGELPDILAITDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVL--------YEEDV 310 (352)
T ss_pred hhhHHHHHHhCCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEc--------chhcC
Confidence 45566899999999943 3478899999999999977542 1 11233343445543 11233
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 539 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 539 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+++.+.+++.+++++ ++.+++ ..+.+.....+++..+++.
T Consensus 311 ~~~~l~~~l~~ll~~--~~~~~~-----~~~~~~~~~aa~~i~~~i~ 350 (352)
T PRK12446 311 TVNSLIKHVEELSHN--NEKYKT-----ALKKYNGKEAIQTIIDHIS 350 (352)
T ss_pred CHHHHHHHHHHHHcC--HHHHHH-----HHHHcCCCCHHHHHHHHHH
Confidence 678999999999877 444432 2233555566666655543
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2e-09 Score=121.06 Aligned_cols=294 Identities=16% Similarity=0.187 Sum_probs=190.2
Q ss_pred CCcEEEEeCCCcccchHHHHHh-hhcCCCC-------cCCceEEEEEecCCccc--ccCcccccccCCCcccc--ccc--
Q 007212 228 KKNVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQFK--SSF-- 293 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~l~~~~~--~~~-- 293 (612)
++. +||.||-|++++..-+-+ +.-..|+ ....-++||-|++.+.+ .|+...+..+- |..+. ...
T Consensus 302 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~L-pr~~~ii~~in~ 379 (798)
T PRK14985 302 DYE-VIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLL-PRHMQIIKEINT 379 (798)
T ss_pred CCc-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHh-HHHHHHHHHHHH
Confidence 556 599999888876665443 3221121 12456899999887655 35554443221 11100 000
Q ss_pred ccc----cCCCC---------CcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccC
Q 007212 294 DFI----DGYNK---------PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV 360 (612)
Q Consensus 294 ~~~----~~~~~---------~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~ 360 (612)
.|. ..+.. .+....+++-..++..|..|-.||.-+.+.+.+.-..... .+ -+.++.-|.|||..
T Consensus 380 ~fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~--~l-~p~kf~nvTNGVt~ 456 (798)
T PRK14985 380 RFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYH--QL-WPNKFHNVTNGITP 456 (798)
T ss_pred HHHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhH--hh-CCCccCCcCCCcCc
Confidence 000 00000 0011235566667778888888888777654431110000 00 02377789999999
Q ss_pred CCcC----CCcc----cccc-------------cccCc-ch----hhhccHHHHHHH----HHHhCCCCCCCCcEEEEEc
Q 007212 361 QEWN----PLTD----KYIG-------------VKYDA-ST----VMDAKPLLKEAL----QAEVGLPVDRNIPVIGFIG 410 (612)
Q Consensus 361 ~~~~----p~~~----~~~~-------------~~~~~-~~----~~~~~~~~~~~l----~~~~gl~~~~~~~~i~~iG 410 (612)
..|- |.-. .++. .+|.. .. +.+.+..+|..| +++.|+..+++...++++-
T Consensus 457 rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~k 536 (798)
T PRK14985 457 RRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIK 536 (798)
T ss_pred chhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHh
Confidence 9984 3211 1111 11222 12 245555555554 5677888888889999999
Q ss_pred cCccccCHHH-HHHHHHhccc----C-----CeEEEEEecCC------hhHHHHHHHHHHHC------CC--ceEEEecc
Q 007212 411 RLEEQKGSDI-LAAAIPHFIK----E-----NVQIIVLGTGK------KPMEKQLEQLEILY------PE--KARGVAKF 466 (612)
Q Consensus 411 rl~~~Kg~d~-li~A~~~l~~----~-----~~~lvivG~g~------~~~~~~l~~l~~~~------~~--~v~~~~~~ 466 (612)
|+.++|...+ ++..+..+.+ + +.++++.|... +.+.+.+..++... .+ +|.|+..|
T Consensus 537 R~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY 616 (798)
T PRK14985 537 RLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDY 616 (798)
T ss_pred hhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCC
Confidence 9999999988 6666554432 2 48899999854 34555666666432 22 79999999
Q ss_pred ChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CcceEEec
Q 007212 467 NIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~ 526 (612)
+...+..++.+||+....|+ .|++|..=+-+|..|.+.+.+-.|...|+.++ +.|||.||
T Consensus 617 ~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 617 CVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred ChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeC
Confidence 99999999999999999998 49999999999999999999999999999886 78999996
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.6e-09 Score=119.44 Aligned_cols=295 Identities=18% Similarity=0.208 Sum_probs=193.7
Q ss_pred cEEEEeCCCcccchHHHHHhh-hcCCCC-------cCCceEEEEEecCCccc--ccCcccccccCCC---------cccc
Q 007212 230 NVVFVANDWHTSLIPCYLKTM-YKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLP---------AQFK 290 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~-~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~l~---------~~~~ 290 (612)
.++||.||-|.+++...+-+. ....|+ ....-++||-|++.+.+ .|+.+.+..+--. .++.
T Consensus 314 ~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~fl 393 (815)
T PRK14986 314 KIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFL 393 (815)
T ss_pred ccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHHH
Confidence 346999999988776655432 211121 13457899999987655 3555544332110 1111
Q ss_pred cccc--ccc-----CCC---CCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccC
Q 007212 291 SSFD--FID-----GYN---KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV 360 (612)
Q Consensus 291 ~~~~--~~~-----~~~---~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~ 360 (612)
..+. +.. +.. ..-.+..+++-..++..|..|..||.-+.+.+.+.-... ... +-+.++.-|.|||..
T Consensus 394 ~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~d--f~~-l~P~kf~niTNGV~~ 470 (815)
T PRK14986 394 KTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFAD--FAK-IFPGRFCNVTNGVTP 470 (815)
T ss_pred HHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHH--HHh-hCCCcccccCCCCCh
Confidence 0000 000 000 000012456667788889999999998877653311000 000 112366779999999
Q ss_pred CCcC----CCccc----cccccc---------------Cc---chhhhccHHHHHHH----HHHhCCCCCCCCcEEEEEc
Q 007212 361 QEWN----PLTDK----YIGVKY---------------DA---STVMDAKPLLKEAL----QAEVGLPVDRNIPVIGFIG 410 (612)
Q Consensus 361 ~~~~----p~~~~----~~~~~~---------------~~---~~~~~~~~~~~~~l----~~~~gl~~~~~~~~i~~iG 410 (612)
..|- |.-.. ++...+ ++ ..+.+.+..+|..| +++.|...+++...++++-
T Consensus 471 rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qak 550 (815)
T PRK14986 471 RRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIK 550 (815)
T ss_pred hhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeeeh
Confidence 8886 32111 111111 11 22445566666554 5577988888999999999
Q ss_pred cCccccCHHH-HHHHHHhc---cc-C-----CeEEEEEecCC------hhHHHHHHHHHH------HCCC--ceEEEecc
Q 007212 411 RLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGK------KPMEKQLEQLEI------LYPE--KARGVAKF 466 (612)
Q Consensus 411 rl~~~Kg~d~-li~A~~~l---~~-~-----~~~lvivG~g~------~~~~~~l~~l~~------~~~~--~v~~~~~~ 466 (612)
|+.++|...+ ++..+..+ ++ + +.++++.|... +.+.+.+.+++. ...+ +|.|+..|
T Consensus 551 R~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlenY 630 (815)
T PRK14986 551 RIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNY 630 (815)
T ss_pred hhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCCC
Confidence 9999999998 66665544 33 2 58899999854 355666666665 2333 79999999
Q ss_pred ChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CcceEEecc
Q 007212 467 NIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGS 527 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~ 527 (612)
+...+..++.+||+....|+ .|++|.+-+-+|..|.+.+.+-.|...|+.++ +.|||.||.
T Consensus 631 ~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~ 695 (815)
T PRK14986 631 SVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGN 695 (815)
T ss_pred CHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCC
Confidence 99999999999999999998 49999999999999999999999999999986 789999973
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.5e-10 Score=96.64 Aligned_cols=89 Identities=22% Similarity=0.287 Sum_probs=79.6
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 559 (612)
+.+.|+..++++..++|+|+||+|+|+++.+++.+++.++.+++.+ .|++++.++|..++++ ++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~------------~~~~el~~~i~~ll~~--~~~~ 66 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITY------------NDPEELAEKIEYLLEN--PEER 66 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEE------------CCHHHHHHHHHHHHCC--HHHH
Confidence 4678898999999999999999999999999999999999888876 3999999999999998 7777
Q ss_pred HHHHHHH---HHhhcCcHHHHHHHHH
Q 007212 560 AEMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 560 ~~~~~~~---~~~~fsw~~~a~~~~~ 582 (612)
+++++++ +.++|||+..++++++
T Consensus 67 ~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 67 RRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 7777777 5789999999999864
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.6e-07 Score=97.46 Aligned_cols=342 Identities=17% Similarity=0.136 Sum_probs=185.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCe-EEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR-VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~-V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
|+|++... .+||--.....|+++|.++|++ |.++...+. .+ +... ...++.
T Consensus 1 ~~ivl~~g------GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~--~e-------------------~~l~-~~~~~~ 52 (357)
T COG0707 1 KKIVLTAG------GTGGHVFPALALAEELAKRGWEQVIVLGTGDG--LE-------------------AFLV-KQYGIE 52 (357)
T ss_pred CeEEEEeC------CCccchhHHHHHHHHHHhhCccEEEEeccccc--ce-------------------eeec-cccCce
Confidence 45666653 2788888888999999999996 555532211 00 1111 112666
Q ss_pred EEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccch
Q 007212 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~ 243 (612)
++.++...+..+ .+ +. +......+++...++.+.+.. .+||+|+-+..+.+ .-
T Consensus 53 ~~~I~~~~~~~~--------~~-------~~-~~~~~~~~~~~~~~a~~il~~----------~kPd~vig~Ggyvs-~P 105 (357)
T COG0707 53 FELIPSGGLRRK--------GS-------LK-LLKAPFKLLKGVLQARKILKK----------LKPDVVIGTGGYVS-GP 105 (357)
T ss_pred EEEEeccccccc--------Cc-------HH-HHHHHHHHHHHHHHHHHHHHH----------cCCCEEEecCCccc-cH
Confidence 777765443221 11 11 232223344444444444432 25998665554443 33
Q ss_pred HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEe
Q 007212 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~ 323 (612)
+.+.... .++|+++...|... |. .-+...+.++.|.+
T Consensus 106 ~~~Aa~~-------~~iPv~ihEqn~~~-G~-----------------------------------ank~~~~~a~~V~~ 142 (357)
T COG0707 106 VGIAAKL-------LGIPVIIHEQNAVP-GL-----------------------------------ANKILSKFAKKVAS 142 (357)
T ss_pred HHHHHHh-------CCCCEEEEecCCCc-ch-----------------------------------hHHHhHHhhceeee
Confidence 3333333 47898877766443 10 11234556777666
Q ss_pred cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007212 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 403 (612)
.-+. .. .+.+ +.++.++-|.+..+... .. ....+..... ++
T Consensus 143 ~f~~----~~----~~~~------~~~~~~tG~Pvr~~~~~-~~--------------------~~~~~~~~~~----~~ 183 (357)
T COG0707 143 AFPK----LE----AGVK------PENVVVTGIPVRPEFEE-LP--------------------AAEVRKDGRL----DK 183 (357)
T ss_pred cccc----cc----ccCC------CCceEEecCcccHHhhc-cc--------------------hhhhhhhccC----CC
Confidence 5443 11 1221 22567777777765543 11 1112222221 34
Q ss_pred cEEEEEcc-CccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 404 PVIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~i~~iGr-l~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
++|+.+|. ....+=-+.+.++...+. ++++++....... +++....+ .+.+. ..+..|..+ +..+|+.||++|
T Consensus 184 ~~ilV~GGS~Ga~~ln~~v~~~~~~l~-~~~~v~~~~G~~~-~~~~~~~~-~~~~~--~~v~~f~~d-m~~~~~~ADLvI 257 (357)
T COG0707 184 KTILVTGGSQGAKALNDLVPEALAKLA-NRIQVIHQTGKND-LEELKSAY-NELGV--VRVLPFIDD-MAALLAAADLVI 257 (357)
T ss_pred cEEEEECCcchhHHHHHHHHHHHHHhh-hCeEEEEEcCcch-HHHHHHHH-hhcCc--EEEeeHHhh-HHHHHHhccEEE
Confidence 66666665 444443333444444443 3677766553332 33333333 23332 344455555 557999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCCCc--------ccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHH
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 552 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~ 552 (612)
. + +=++++-|..++|+|.|.-..+.- ...+.+...|.++ +.. .++.+.+.|.++++
T Consensus 258 s--R--aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i----------~~~~lt~~~l~~~i~~l~~ 323 (357)
T COG0707 258 S--R--AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVI----------RQSELTPEKLAELILRLLS 323 (357)
T ss_pred e--C--CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEe----------ccccCCHHHHHHHHHHHhc
Confidence 3 3 336899999999999987665332 2234444556655 444 48999999999999
Q ss_pred hhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
+ ++.+.+|..++ +.+.-...++++.++...+
T Consensus 324 ~--~~~l~~m~~~a--~~~~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 324 N--PEKLKAMAENA--KKLGKPDAAERIADLLLAL 354 (357)
T ss_pred C--HHHHHHHHHHH--HhcCCCCHHHHHHHHHHHH
Confidence 8 77888887775 3334444555555554443
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.2e-09 Score=114.85 Aligned_cols=171 Identities=8% Similarity=0.009 Sum_probs=130.6
Q ss_pred hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHh
Q 007212 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 395 (612)
.+.|.||+.++...+.+.+.... ..++.+||-|+=.. + +..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~---------~~~~~~ip~g~i~~-~-~~~---------------------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN---------EYQEQISQLGYLYP-F-KKD---------------------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc---------ccCceEEEEEEEEe-e-ccc----------------------------
Confidence 57899999998877777753211 12566677665421 1 110
Q ss_pred CCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007212 396 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 396 gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 473 (612)
++....++.++. +..|++++++.+ |+++|.| |.+. ++...|.++ .+++ ++..+..+..+.+.+
T Consensus 279 ----~r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~t-e~s~kL~~L-~~y~-nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 279 ----NKYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALT-EMSSKLMSL-DKYD-NVKLYPNITTQKIQE 343 (438)
T ss_pred ----cCCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecC-cccHHHHHH-HhcC-CcEEECCcChHHHHH
Confidence 112245666662 889999999866 8999999 7665 246788888 6674 577888888867779
Q ss_pred HHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 474 i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
++..||+++-.|..|++++++.||+.+|+|+++-+. -|..+++.+ |.++ +.+|+++|+++|..++.
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~----------~~~~~~~m~~~i~~lL~ 410 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIF----------EHNEVDQLISKLKDLLN 410 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Ccee----------cCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999985 455677766 6665 89999999999999999
Q ss_pred h
Q 007212 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
+
T Consensus 411 d 411 (438)
T TIGR02919 411 D 411 (438)
T ss_pred C
Confidence 8
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.08 E-value=4e-09 Score=118.81 Aligned_cols=292 Identities=21% Similarity=0.237 Sum_probs=194.5
Q ss_pred CCcEEEEeCCCcccchHHHHHh-hhcCCCC-------cCCceEEEEEecCCccc--ccCccccccc---------CCCcc
Q 007212 228 KKNVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLL---------NLPAQ 288 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~---------~l~~~ 288 (612)
++. +||.||-|++++...+-+ +.-..|+ ....-++||-|++.+.+ .|+.+.+..+ ++..+
T Consensus 297 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~ 375 (794)
T TIGR02093 297 KKV-AIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRR 375 (794)
T ss_pred cce-EEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHH
Confidence 456 599999888876665443 2221121 13456899999887655 3555444321 11111
Q ss_pred cccccc--cccCCC-----CCc---CCchhHHHHHHHhhCCEEEecCHHHHHHHHcCc---CCCccchhhhhccCeEEee
Q 007212 289 FKSSFD--FIDGYN-----KPV---RGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIV 355 (612)
Q Consensus 289 ~~~~~~--~~~~~~-----~~~---~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~---~~G~~~~~~~~~~~i~vI~ 355 (612)
+..... +..... ..+ .++.+++-..++..|..|..||+-+.+.+.+.. .+..- +.++.-+.
T Consensus 376 fl~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~------P~kf~n~T 449 (794)
T TIGR02093 376 FLAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELY------PEKFNNKT 449 (794)
T ss_pred HHHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhC------CCccCCcC
Confidence 111000 000000 000 012467777788899999999998887776410 11111 13677899
Q ss_pred CCccCCCcCCCcc---cccccc------------------c-Cc----chhhhccHHHHHHH----HHHhCCCCCCCCcE
Q 007212 356 NGMDVQEWNPLTD---KYIGVK------------------Y-DA----STVMDAKPLLKEAL----QAEVGLPVDRNIPV 405 (612)
Q Consensus 356 ngvd~~~~~p~~~---~~~~~~------------------~-~~----~~~~~~~~~~~~~l----~~~~gl~~~~~~~~ 405 (612)
|||.+..|--... ..+..+ + +. ..+.+.|..+|..| ++..|...+++...
T Consensus 450 NGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slf 529 (794)
T TIGR02093 450 NGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIF 529 (794)
T ss_pred CCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccc
Confidence 9999988852111 111111 1 11 33455666666665 55778888888899
Q ss_pred EEEEccCccccCHHH-HHHHHHhc---cc-C-----CeEEEEEecCC------hhHHHHHHHHHHH------CCC--ceE
Q 007212 406 IGFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGK------KPMEKQLEQLEIL------YPE--KAR 461 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~-li~A~~~l---~~-~-----~~~lvivG~g~------~~~~~~l~~l~~~------~~~--~v~ 461 (612)
++++-|+.++|...+ ++..+..+ ++ + +.++++.|... +...+.+..++.. ..+ +|.
T Consensus 530 dvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVV 609 (794)
T TIGR02093 530 DVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVV 609 (794)
T ss_pred hhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEE
Confidence 999999999999998 66665544 33 2 56899999754 3455666666643 223 799
Q ss_pred EEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CcceEEec
Q 007212 462 GVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 462 ~~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~ 526 (612)
|+..|+...+..++.+||+....|+ .|++|..=+-+|..|.+.+.+-.|...|+.++ +.|+|+||
T Consensus 610 FlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 610 FVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred EeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcC
Confidence 9999999999999999999999998 49999999999999999999999999999987 78999996
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.7e-08 Score=114.36 Aligned_cols=315 Identities=19% Similarity=0.220 Sum_probs=205.3
Q ss_pred HHHHHHHHHHh-hhhccCCCCccCCCCCCCcEEEEeCCCcccchHHHHHh-hhcCCCC-------cCCceEEEEEecCCc
Q 007212 201 SLLCQAALEAP-RILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAY 271 (612)
Q Consensus 201 ~~~~~~~~~~~-~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~ 271 (612)
.+|+.+.++.+ +.+..... -+.+ +.++. +||.||-|++++...+-+ +.-..|+ ....-++||-|++.+
T Consensus 274 yfl~sag~qdilr~~~~~~~-~~~~-l~~~~-~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lp 350 (797)
T cd04300 274 YFFVSASLQDIIRRFKKTHG-PLSE-FPDKV-AIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLP 350 (797)
T ss_pred HHHhhhHHHHHHHHHHHhCC-Chhh-CCCce-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCch
Confidence 45666666664 55421111 1111 23556 599999888876665443 3211221 134568999998876
Q ss_pred cc--ccCcccccccCCCcccc------------------------cccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 272 QG--RFAFEDFGLLNLPAQFK------------------------SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 272 ~~--~~~~~~~~~~~l~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
.+ .|+.+.+..+- |..+. ..+.-++.- ..+.+++-..++..|..|..||
T Consensus 351 ealE~wp~~l~~~~l-pr~~~II~~In~~~~~~~~~~~~~~~~~~~~l~ii~~~----~~~~v~Ma~LAi~~S~~vNGVS 425 (797)
T cd04300 351 EALEKWPVDLFERLL-PRHLEIIYEINRRFLEEVRAKYPGDEDRIRRMSIIEEG----GEKQVRMAHLAIVGSHSVNGVA 425 (797)
T ss_pred HHhCccCHHHHHHHC-hHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcccccC----CCCEEehHHHHHhcCcchhhhH
Confidence 55 35544443321 11110 000000100 1134667777888999999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCccc---ccccc------------------c--Cc---ch
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDK---YIGVK------------------Y--DA---ST 379 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~---~~~~~------------------~--~~---~~ 379 (612)
.-+.+.+++...... ..+. +.++.-+.|||....|--...+ .+..+ | |+ ..
T Consensus 426 ~lH~ei~k~~~~~df--~~l~-P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~ 502 (797)
T cd04300 426 ALHSELLKETVFKDF--YELY-PEKFNNKTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKE 502 (797)
T ss_pred HHHHHHHHHhhHHHH--HhhC-CCccCCcCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHH
Confidence 988887775310000 0011 1367789999999888521111 11111 1 11 33
Q ss_pred hhhccHHHHHHH----HHHhCCCCCCCCcEEEEEccCccccCHHH-HHHHHHh---ccc-C-----CeEEEEEecCC---
Q 007212 380 VMDAKPLLKEAL----QAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPH---FIK-E-----NVQIIVLGTGK--- 442 (612)
Q Consensus 380 ~~~~~~~~~~~l----~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~-li~A~~~---l~~-~-----~~~lvivG~g~--- 442 (612)
+.+.+..+|..| ++..|+..+++...++++-|+.++|...+ ++..+.. +++ + +.++++.|...
T Consensus 503 l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y 582 (797)
T cd04300 503 FRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGY 582 (797)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCc
Confidence 446666666665 55788888889999999999999999999 6666544 433 2 47888988754
Q ss_pred ---hhHHHHHHHHHHH------CCC--ceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCC
Q 007212 443 ---KPMEKQLEQLEIL------YPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 443 ---~~~~~~l~~l~~~------~~~--~v~~~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+...+.+..++.. ..+ +|.|+..|+...+..++.+||+....|+ .|++|..=+-+|..|.+.+.|-.
T Consensus 583 ~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlD 662 (797)
T cd04300 583 YMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLD 662 (797)
T ss_pred HHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeeccc
Confidence 3556666666653 223 7899999999999999999999999998 49999999999999999999999
Q ss_pred CCcccceec--CcceEEec
Q 007212 510 GGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 510 gg~~e~v~~--g~~G~~~~ 526 (612)
|...|+.++ +.|+|+||
T Consensus 663 GanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 663 GANVEIAEEVGEENIFIFG 681 (797)
T ss_pred chhHHHHHHhCcCcEEEeC
Confidence 999999987 78999997
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.5e-08 Score=110.18 Aligned_cols=288 Identities=19% Similarity=0.256 Sum_probs=168.6
Q ss_pred EEEEeCCCcccchHHHHHh-hhcCCCC-------cCCceEEEEEecCCccc--ccCcccccccCCCc----------ccc
Q 007212 231 VVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------QFK 290 (612)
Q Consensus 231 vVi~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~l~~----------~~~ 290 (612)
++||.||-|++++..-+-+ +....|+ ....-++||.|.+.+.+ +|+.+.+..+ +|. ++.
T Consensus 216 ~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~-Lpr~~~ii~ein~~f~ 294 (713)
T PF00343_consen 216 VVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERY-LPRHLEIIYEINRRFL 294 (713)
T ss_dssp EEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHH-SHHHHHHHHHHHHHHH
T ss_pred eEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHH-ChHHHHHHHHHhHHHH
Confidence 5699999998887665443 3333343 12346899999987765 3554443321 111 110
Q ss_pred c--------------ccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeC
Q 007212 291 S--------------SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356 (612)
Q Consensus 291 ~--------------~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~n 356 (612)
. .+..++. -....+++-..++..|..+-.||+-+.+.+.+...... .++ -+.++.-|.|
T Consensus 295 ~~~~~~~~~d~~~~~~l~ii~~----~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f--~~l-~P~kf~nvTN 367 (713)
T PF00343_consen 295 DELRRKYPGDEDQIRRLSIIEE----GNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDF--YEL-WPEKFGNVTN 367 (713)
T ss_dssp HHHHHHSTT-HHHHHHHSSEET----SSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHH--HHH-SGGGEEE---
T ss_pred HHHHHHhcCcchhhhhcccccc----cchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhh--hhc-CCceeecccc
Confidence 0 0000100 01235677788899999999999988887664211111 111 1237999999
Q ss_pred CccCCCcCCCcc--------ccccccc--Ccchh----------------hhccHHHHH----HHHHHhCCCCCCCCcEE
Q 007212 357 GMDVQEWNPLTD--------KYIGVKY--DASTV----------------MDAKPLLKE----ALQAEVGLPVDRNIPVI 406 (612)
Q Consensus 357 gvd~~~~~p~~~--------~~~~~~~--~~~~~----------------~~~~~~~~~----~l~~~~gl~~~~~~~~i 406 (612)
||.+..|-.... +++...+ +++.+ .+.|..+|. .++++.|+..+++...+
T Consensus 368 GVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfd 447 (713)
T PF00343_consen 368 GVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFD 447 (713)
T ss_dssp -B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEE
T ss_pred CccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhh
Confidence 999999853211 1222111 12211 123333333 34567787777788899
Q ss_pred EEEccCccccCHHH-HH---HHHHhccc------CCeEEEEEecCC------hhHHHHHHHHHHH------CCC--ceEE
Q 007212 407 GFIGRLEEQKGSDI-LA---AAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQLEIL------YPE--KARG 462 (612)
Q Consensus 407 ~~iGrl~~~Kg~d~-li---~A~~~l~~------~~~~lvivG~g~------~~~~~~l~~l~~~------~~~--~v~~ 462 (612)
+++-|+.++|...+ ++ +-..++++ .++++++.|... +.+.+.+.+++.. ..+ +|.|
T Consensus 448 v~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvF 527 (713)
T PF00343_consen 448 VQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVF 527 (713)
T ss_dssp EEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEE
T ss_pred hhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEe
Confidence 99999999999888 33 33444443 268999999854 3455555555542 122 6899
Q ss_pred EeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CcceEEec
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~ 526 (612)
+..|+..++..++.+||+.+..|+ .|++|.+-+-+|..|.+.+++-.|...|+.++ ..+.|+||
T Consensus 528 lenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG 595 (713)
T PF00343_consen 528 LENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFG 595 (713)
T ss_dssp ETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES
T ss_pred ecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcC
Confidence 999999999999999999999998 49999999999999999999999999998764 46889996
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.5e-07 Score=89.32 Aligned_cols=182 Identities=19% Similarity=0.206 Sum_probs=112.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
.||++|++---| +..||.++++.+|+..|+++||+|+|.|..... .. ....++|++.
T Consensus 2 kkIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~-~~---------------------~~~~y~gv~l 58 (185)
T PF09314_consen 2 KKIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYY-PY---------------------KEFEYNGVRL 58 (185)
T ss_pred ceEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCC-CC---------------------CCcccCCeEE
Confidence 379999999778 689999999999999999999999999976221 11 0224568888
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCc-ccch
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWH-TSLI 243 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~-~~~~ 243 (612)
+.+..+..-. ...+.....+++.+++....+ -.+.|+ ++.+... .+++
T Consensus 59 ~~i~~~~~g~----------------------~~si~yd~~sl~~al~~~~~~--------~~~~~i-i~ilg~~~g~~~ 107 (185)
T PF09314_consen 59 VYIPAPKNGS----------------------AESIIYDFLSLLHALRFIKQD--------KIKYDI-ILILGYGIGPFF 107 (185)
T ss_pred EEeCCCCCCc----------------------hHHHHHHHHHHHHHHHHHhhc--------cccCCE-EEEEcCCccHHH
Confidence 8886543210 111222233334444221100 012575 6666555 3444
Q ss_pred HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchh-HHHHHHHhhCCEEE
Q 007212 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVL 322 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~l~~ad~vi 322 (612)
..+++.+.+ .+.|+++.+|.+++.. - .++.+.+ ..+ .-++.+.+.||.+|
T Consensus 108 ~~~~r~~~~-----~g~~v~vN~DGlEWkR-~------KW~~~~k-----------------~~lk~~E~~avk~ad~lI 158 (185)
T PF09314_consen 108 LPFLRKLRK-----KGGKVVVNMDGLEWKR-A------KWGRPAK-----------------KYLKFSEKLAVKYADRLI 158 (185)
T ss_pred HHHHHhhhh-----cCCcEEECCCcchhhh-h------hcCHHHH-----------------HHHHHHHHHHHHhCCEEE
Confidence 444444321 3679999999877522 0 1111110 111 12356788999999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCcc
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 359 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd 359 (612)
+.|+...+.+.+. ++. .+..+|++|.|
T Consensus 159 aDs~~I~~y~~~~--y~~--------~~s~~IaYGad 185 (185)
T PF09314_consen 159 ADSKGIQDYIKER--YGR--------KKSTFIAYGAD 185 (185)
T ss_pred EcCHHHHHHHHHH--cCC--------CCcEEecCCCC
Confidence 9999999999963 441 27899999986
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.9e-06 Score=88.20 Aligned_cols=263 Identities=15% Similarity=0.164 Sum_probs=155.1
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+|+..-|-.+.+.+.+.... .++|++ .+|+ |....+ .++
T Consensus 93 ~Pd~vlv~GD~~~~la~alaA~~-------~~IPv~-Hvea----G~rs~~------~~e-------------------- 134 (365)
T TIGR03568 93 KPDLVVVLGDRFEMLAAAIAAAL-------LNIPIA-HIHG----GEVTEG------AID-------------------- 134 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHH-------hCCcEE-EEEC----CccCCC------Cch--------------------
Confidence 58986666566666666666554 488988 4553 211100 011
Q ss_pred hHHHHHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeC-CccCCCcCCCcccccccccCcchhhhccH
Q 007212 308 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 308 ~~~~k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~n-gvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
+..+..+ +.|+..++.++..++.+.+ .|.+.+ +|.++-| ++|.-.+....
T Consensus 135 -E~~r~~i~~la~l~f~~t~~~~~~L~~---eg~~~~------~i~~tG~~~iD~l~~~~~~------------------ 186 (365)
T TIGR03568 135 -ESIRHAITKLSHLHFVATEEYRQRVIQ---MGEDPD------RVFNVGSPGLDNILSLDLL------------------ 186 (365)
T ss_pred -HHHHHHHHHHHhhccCCCHHHHHHHHH---cCCCCC------cEEEECCcHHHHHHhhhcc------------------
Confidence 1122233 4578999999999998886 566544 6776655 55543221110
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEccCc--c---ccCHHHHHHHHHhcccCCeEEEEE-e-cCChhHHHHHHHHHHHCCC
Q 007212 386 LLKEALQAEVGLPVDRNIPVIGFIGRLE--E---QKGSDILAAAIPHFIKENVQIIVL-G-TGKKPMEKQLEQLEILYPE 458 (612)
Q Consensus 386 ~~~~~l~~~~gl~~~~~~~~i~~iGrl~--~---~Kg~d~li~A~~~l~~~~~~lviv-G-~g~~~~~~~l~~l~~~~~~ 458 (612)
.+..+.+++|++.+. ..+++.+-+-+ . .+.+..+++++..+ ..++.++.- + .+.+...+.++++... ..
T Consensus 187 -~~~~~~~~lgl~~~~-~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~-~~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~ 262 (365)
T TIGR03568 187 -SKEELEEKLGIDLDK-PYALVTFHPVTLEKESAEEQIKELLKALDEL-NKNYIFTYPNADAGSRIINEAIEEYVNE-HP 262 (365)
T ss_pred -CHHHHHHHhCCCCCC-CEEEEEeCCCcccccCchHHHHHHHHHHHHh-ccCCEEEEeCCCCCchHHHHHHHHHhcC-CC
Confidence 145677888886432 23334444322 2 33455555555554 224433221 2 2223455566665422 24
Q ss_pred ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCC
Q 007212 459 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 459 ~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~ 538 (612)
++.........+...+++.||++|--| .|.. .||.++|+|+|+ .+.-+|.+..|.+.+++ ..
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdS----Sggi-~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-----------g~ 324 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNS----SSGI-IEAPSFGVPTIN--IGTRQKGRLRADSVIDV-----------DP 324 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcC----hhHH-HhhhhcCCCEEe--ecCCchhhhhcCeEEEe-----------CC
Confidence 588888888888889999999999433 2333 899999999994 45677888777777753 56
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHH
Q 007212 539 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 583 (612)
Q Consensus 539 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~ 583 (612)
|++++.+++.++++ ...+..+.. ....|...+.++++.++
T Consensus 325 ~~~~I~~a~~~~~~---~~~~~~~~~--~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 325 DKEEIVKAIEKLLD---PAFKKSLKN--VKNPYGDGNSSERIIEI 364 (365)
T ss_pred CHHHHHHHHHHHhC---hHHHHHHhh--CCCCCCCChHHHHHHHh
Confidence 89999999998543 222222211 23446666667776654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.2e-07 Score=98.16 Aligned_cols=320 Identities=17% Similarity=0.241 Sum_probs=175.4
Q ss_pred CcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCccccc-CcccccccCCCcccccccccccCCCCCcCCch
Q 007212 229 KNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 229 pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+-||-|.|+|+.+...++.+... ..+-.|||.|.... |++ +...+...+-.+.+ ..+...|-.+ .+-.
T Consensus 174 ~~vVahFHEW~AGVgL~l~R~rr------l~iaTifTTHATLL-GRyLCA~~~DfYNnLd~f--~vD~EAGkr~--IYHr 242 (692)
T KOG3742|consen 174 TAVVAHFHEWQAGVGLILCRARR------LDIATIFTTHATLL-GRYLCAGNVDFYNNLDSF--DVDKEAGKRQ--IYHR 242 (692)
T ss_pred hHHHHHHHHHHhccchheehhcc------cceEEEeehhHHHH-HHHHhcccchhhhchhhc--ccchhhccch--hHHH
Confidence 45667889999987666555432 37778999997654 332 22222211111111 0111111111 1123
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHH
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
.-+++++...|+.+.|||+-.+-+... +++++.=.+.|||.++..|..... + . .-.+..
T Consensus 243 YC~ERaa~h~AhVFTTVSeITa~EAeH----------lLkRKPD~itPNGLNV~KFsA~HE-F-------Q---NLHA~~ 301 (692)
T KOG3742|consen 243 YCLERAAAHTAHVFTTVSEITALEAEH----------LLKRKPDVITPNGLNVKKFSAVHE-F-------Q---NLHAQK 301 (692)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHHHHHH----------HHhcCCCeeCCCCcceeehhHHHH-H-------H---HHHHHH
Confidence 345677777888999999876544332 233334566799999988754321 0 0 011222
Q ss_pred HHHHHHH--------hCCCCCCCCcEEEEEccCc-cccCHHHHHHHHHhccc------CC---eEEEEEecC--------
Q 007212 388 KEALQAE--------VGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK------EN---VQIIVLGTG-------- 441 (612)
Q Consensus 388 ~~~l~~~--------~gl~~~~~~~~i~~iGrl~-~~Kg~d~li~A~~~l~~------~~---~~lvivG~g-------- 441 (612)
|+.+..- +...-+ +...+...||.+ .+||-|.+||+++.|-- .+ +.|+|.-..
T Consensus 302 KekIndFVRGHF~GhlDFdLd-kTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVes 380 (692)
T KOG3742|consen 302 KEKINDFVRGHFHGHLDFDLD-KTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVES 380 (692)
T ss_pred HHHHHHHhhhhcccccccccc-ceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhh
Confidence 3333222 111212 335667789998 69999999999998832 11 334443221
Q ss_pred ---C---hhHHH-----------------------------------HHHH----HHH-HCC------------------
Q 007212 442 ---K---KPMEK-----------------------------------QLEQ----LEI-LYP------------------ 457 (612)
Q Consensus 442 ---~---~~~~~-----------------------------------~l~~----l~~-~~~------------------ 457 (612)
. +.+.+ .+++ +.. .+|
T Consensus 381 LkgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~ 460 (692)
T KOG3742|consen 381 LKGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSS 460 (692)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHH
Confidence 0 00000 0000 000 011
Q ss_pred -------------CceEEEeccCh---H----HHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCccc---
Q 007212 458 -------------EKARGVAKFNI---P----LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD--- 514 (612)
Q Consensus 458 -------------~~v~~~~~~~~---~----~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e--- 514 (612)
.++.+.+.|.. + +..++..+|.+.|+||.+||+|.+..|+-.+|+|-|.++.+|+.-
T Consensus 461 iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMe 540 (692)
T KOG3742|consen 461 IRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFME 540 (692)
T ss_pred hHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHH
Confidence 12333333311 1 122578899999999999999999999999999999999988654
Q ss_pred -ceecC-cceEEeccccccccc-CCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH----HHhhcCcHHHHHHHHHHHHHH
Q 007212 515 -TVEEG-FTGFQMGSFSVDCEA-VDPVDVAAVSTTVRRALATYGTQALAEMMKNG----MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 515 -~v~~g-~~G~~~~~~~~~~~~-v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~----~~~~fsw~~~a~~~~~~y~~l 587 (612)
.|.+. ..|+.+ +|--. -..+++++|++.+...... ..++++.++. ...-.+|+.+...|.+.=.-+
T Consensus 541 ehi~d~~ayGIYI----vDRRfks~deSv~qL~~~m~~F~~q---sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~la 613 (692)
T KOG3742|consen 541 EHIEDPQAYGIYI----VDRRFKSPDESVQQLASFMYEFCKQ---SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLA 613 (692)
T ss_pred HHhcCchhceEEE----EecccCChhhHHHHHHHHHHHHHHH---HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHH
Confidence 44432 234433 11000 1224556677666666553 3444444433 466789999988887765444
Q ss_pred H
Q 007212 588 E 588 (612)
Q Consensus 588 ~ 588 (612)
+
T Consensus 614 L 614 (692)
T KOG3742|consen 614 L 614 (692)
T ss_pred H
Confidence 3
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.2e-05 Score=84.75 Aligned_cols=124 Identities=19% Similarity=0.176 Sum_probs=80.6
Q ss_pred CCcEEEEEccCcc---ccCHHHHHHHHHhcccCCeEEE-EEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007212 402 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 402 ~~~~i~~iGrl~~---~Kg~d~li~A~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 477 (612)
+.++++..|.... .+-...+++++..+ +.+++ .+|..... . ...++++......+.. .++..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~--~------~~~~~~v~~~~~~p~~---~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG--A------EDLPDNVRVVDFVPHD---WLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc--c------cCCCCceEEeCCCCHH---HHhhh
Confidence 3467778888743 45556667777665 55544 45544311 1 2345567655554433 47999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll 551 (612)
||++|.- +=..++.||+++|+|+|+....+ ..+.+.+.+.|... +.. +.+++.+++.+++
T Consensus 305 ~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l----------~~~~~~~~~l~~al~~~l 370 (401)
T cd03784 305 CAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL----------DPRELTAERLAAALRRLL 370 (401)
T ss_pred hheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC----------CcccCCHHHHHHHHHHHh
Confidence 9999932 33488999999999999887654 23344444566643 333 7899999999999
Q ss_pred Hh
Q 007212 552 AT 553 (612)
Q Consensus 552 ~~ 553 (612)
++
T Consensus 371 ~~ 372 (401)
T cd03784 371 DP 372 (401)
T ss_pred CH
Confidence 85
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.5e-05 Score=83.16 Aligned_cols=119 Identities=19% Similarity=0.269 Sum_probs=80.7
Q ss_pred CCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
...+++++|..... .++++++++ ++.+++++|....+ ....++. +..|..+...++++.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~~----------~~~~ni~-~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAAD----------PRPGNIH-VRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCccc----------ccCCCEE-EeecChHHHHHHHHhCCEE
Confidence 44689999988766 667888886 57888888765310 1134455 4556656677899999999
Q ss_pred EEcCCCCCCcHH-HHHHHHcCCceEEcCCCCccc------ceecCcceEEecccccccccCCCCCHHHHHHHHHHH
Q 007212 482 LIPSRFEPCGLI-QLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 482 v~pS~~E~~gl~-~lEAma~G~PvI~s~~gg~~e------~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~l 550 (612)
|.- .|.. +.||+++|+|+|+-...+..| .+++.+.|..+ -...-+++.|.+.|+++
T Consensus 255 Is~-----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~--------~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 255 ISK-----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL--------SQEDLTPERLAEFLERL 317 (318)
T ss_pred EEC-----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc--------ccccCCHHHHHHHHhcC
Confidence 954 3555 999999999999888765444 33334445543 01234678888877653
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.4e-05 Score=81.80 Aligned_cols=175 Identities=20% Similarity=0.205 Sum_probs=99.7
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEe-eCCccCCC----cCCCcccccccccCcchhhhccHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI-VNGMDVQE----WNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI-~ngvd~~~----~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+..||.+++..-.-...+.. +|.. + .+. +||++.-- |.| .
T Consensus 122 t~Pla~~i~~P~~~~~~~~~~---~G~~-~--------~i~~y~G~~E~ayl~~F~P----------------------d 167 (335)
T PF04007_consen 122 TLPLADVIITPEAIPKEFLKR---FGAK-N--------QIRTYNGYKELAYLHPFKP----------------------D 167 (335)
T ss_pred ehhcCCeeECCcccCHHHHHh---cCCc-C--------CEEEECCeeeEEeecCCCC----------------------C
Confidence 456789988877654444443 4533 2 234 67776433 444 3
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccC------HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKG------SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg------~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
..+.+++|+.. + ++|+. |.++.+. -+.+-+.++.|.+..-.++++-...+ . .++..+++ +..
T Consensus 168 ~~vl~~lg~~~--~-~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~-~----~~~~~~~~--~~i 235 (335)
T PF04007_consen 168 PEVLKELGLDD--E-PYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED-Q----RELFEKYG--VII 235 (335)
T ss_pred hhHHHHcCCCC--C-CEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc-h----hhHHhccC--ccc
Confidence 46788899652 2 45543 5444332 23345666666553333666654331 1 12222332 211
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC---CcccceecCcceEEecccccccccCCCCC
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~~~~~~~~~~~~v~~~d 539 (612)
... .-..+.++..||++|- +-|....||...|+|.|.+-.| +..+.+.+ .|+++ ...|
T Consensus 236 ~~~--~vd~~~Ll~~a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~----------~~~~ 296 (335)
T PF04007_consen 236 PPE--PVDGLDLLYYADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLY----------HSTD 296 (335)
T ss_pred cCC--CCCHHHHHHhcCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeE----------ecCC
Confidence 111 1123368999999993 3468899999999999986543 33333333 47766 7789
Q ss_pred HHHHHHHHHHHHHh
Q 007212 540 VAAVSTTVRRALAT 553 (612)
Q Consensus 540 ~~~la~~i~~ll~~ 553 (612)
++++.+.+...+..
T Consensus 297 ~~ei~~~v~~~~~~ 310 (335)
T PF04007_consen 297 PDEIVEYVRKNLGK 310 (335)
T ss_pred HHHHHHHHHHhhhc
Confidence 99999877665543
|
They are found in archaea and some bacteria and have no known function. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.44 E-value=0.00012 Score=78.88 Aligned_cols=191 Identities=15% Similarity=0.042 Sum_probs=112.9
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (612)
.-+.|+.+++..+...+.+.+ .|+ ++.++=|.+=.... +.. +
T Consensus 157 ~~~~a~~v~~~~~~t~~~l~~---~g~---------k~~~vGnPv~d~l~-~~~--------------------~----- 198 (396)
T TIGR03492 157 RSRRCLAVFVRDRLTARDLRR---QGV---------RASYLGNPMMDGLE-PPE--------------------R----- 198 (396)
T ss_pred hchhhCEEeCCCHHHHHHHHH---CCC---------eEEEeCcCHHhcCc-ccc--------------------c-----
Confidence 446799999999988888875 332 45555554422111 100 0
Q ss_pred HhCCCCCCCCcEEEEEccC--ccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCCC------------
Q 007212 394 EVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPE------------ 458 (612)
Q Consensus 394 ~~gl~~~~~~~~i~~iGrl--~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~------------ 458 (612)
.+++.+ ...++++-|.- +-.+++..++++++.+.+ +++++++.-.+.... +.+++...+.+-
T Consensus 199 -~~l~~~-~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 199 -KPLLTG-RFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL-EKLQAILEDLGWQLEGSSEDQTSL 275 (396)
T ss_pred -cccCCC-CCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH-HHHHHHHHhcCceecCCccccchh
Confidence 033322 22344555554 235688899999999954 578887654232212 223332222110
Q ss_pred ----ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc---cceecC----cceEEecc
Q 007212 459 ----KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV---DTVEEG----FTGFQMGS 527 (612)
Q Consensus 459 ----~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~---e~v~~g----~~G~~~~~ 527 (612)
.+.... + ......+++.||++|..| |.+..|++++|+|+|.....+.. .+.+.. ..+..
T Consensus 276 ~~~~~~~v~~-~-~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~--- 345 (396)
T TIGR03492 276 FQKGTLEVLL-G-RGAFAEILHWADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVF--- 345 (396)
T ss_pred hccCceEEEe-c-hHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEe---
Confidence 122222 2 234567999999999774 57779999999999998743331 111220 12222
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007212 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 564 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 564 (612)
+...+++.+++.+.+++++ ++.+.+|.+
T Consensus 346 -------l~~~~~~~l~~~l~~ll~d--~~~~~~~~~ 373 (396)
T TIGR03492 346 -------LASKNPEQAAQVVRQLLAD--PELLERCRR 373 (396)
T ss_pred -------cCCCCHHHHHHHHHHHHcC--HHHHHHHHH
Confidence 2567789999999999987 666666653
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.9e-05 Score=78.79 Aligned_cols=96 Identities=16% Similarity=0.172 Sum_probs=69.3
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEE-EEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
.+++++|..++.+....+++++.++. .++++ +++|.+.+ ..+.+++.....+ ++... . ..+.+..+++.||++|
T Consensus 172 ~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~-~~~~l~~~~~~~~-~i~~~-~-~~~~m~~lm~~aDl~I 246 (279)
T TIGR03590 172 RVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNP-NLDELKKFAKEYP-NIILF-I-DVENMAELMNEADLAI 246 (279)
T ss_pred eEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCc-CHHHHHHHHHhCC-CEEEE-e-CHHHHHHHHHHCCEEE
Confidence 57899999998887788899998763 34443 36677653 3355666665544 45532 3 3455668999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCC
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
.+ .|.++.|++++|+|+|+-..
T Consensus 247 s~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 247 GA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred EC-----CchHHHHHHHcCCCEEEEEe
Confidence 73 67999999999999997754
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.9e-05 Score=80.44 Aligned_cols=271 Identities=14% Similarity=0.140 Sum_probs=147.2
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+|++.=|-.+.+.+...... .++| |..+|. |.-..+. ..+.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~-------~~ip-v~Hiea----GlRs~d~--~~g~~d-------------------- 112 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFY-------LNIP-VAHIEA----GLRSGDR--TEGMPD-------------------- 112 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHH-------TT-E-EEEES---------S-T--TSSTTH--------------------
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-------hCCC-EEEecC----CCCcccc--CCCCch--------------------
Confidence 48987666677777776766665 4899 446663 2110000 001111
Q ss_pred hHHHHHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeC-CccCCCcCCCcccccccccCcchhhhccH
Q 007212 308 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 308 ~~~~k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~n-gvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
+..|..+ +.|+.-++.++..++.+.+ .|.+.+ +|.++=| ++|.-.... .
T Consensus 113 -e~~R~~i~~la~lhf~~t~~~~~~L~~---~G~~~~------rI~~vG~~~~D~l~~~~-------------------~ 163 (346)
T PF02350_consen 113 -EINRHAIDKLAHLHFAPTEEARERLLQ---EGEPPE------RIFVVGNPGIDALLQNK-------------------E 163 (346)
T ss_dssp -HHHHHHHHHH-SEEEESSHHHHHHHHH---TT--GG------GEEE---HHHHHHHHHH-------------------H
T ss_pred -hhhhhhhhhhhhhhccCCHHHHHHHHh---cCCCCC------eEEEEChHHHHHHHHhH-------------------H
Confidence 2334444 4599999999999999997 788766 7887765 333211100 0
Q ss_pred HHHHHH-HHHhCCCCCCCCcEEEEEccCc--c-ccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCCCce
Q 007212 386 LLKEAL-QAEVGLPVDRNIPVIGFIGRLE--E-QKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKA 460 (612)
Q Consensus 386 ~~~~~l-~~~~gl~~~~~~~~i~~iGrl~--~-~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v 460 (612)
...+.+ ...+... ..+..+++..=|.+ . ......+.++++.+.+ .++++++.....+...+.+.+...++ .++
T Consensus 164 ~~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v 241 (346)
T PF02350_consen 164 EIEEKYKNSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNV 241 (346)
T ss_dssp TTCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTE
T ss_pred HHhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCE
Confidence 000000 1111001 12334444443333 2 3456777788887766 58999998886666677777666666 478
Q ss_pred EEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC-CCCcccceecCcceEEecccccccccCCCCC
Q 007212 461 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 461 ~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d 539 (612)
..+..........+++.|+++|-= .|.++-||..+|+|+|.-. .|--.+.+..+.+-+ + ..|
T Consensus 242 ~~~~~l~~~~~l~ll~~a~~vvgd-----SsGI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v-----------~~~ 304 (346)
T PF02350_consen 242 RLIEPLGYEEYLSLLKNADLVVGD-----SSGIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-V-----------GTD 304 (346)
T ss_dssp EEE----HHHHHHHHHHESEEEES-----SHHHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-E-----------TSS
T ss_pred EEECCCCHHHHHHHHhcceEEEEc-----CccHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-e-----------CCC
Confidence 888888888888899999999833 3544449999999999885 455567766665544 4 489
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHH
Q 007212 540 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 540 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y 584 (612)
.+++.+++.+++++ ...+.++.. ....|.-.+.++++.+++
T Consensus 305 ~~~I~~ai~~~l~~--~~~~~~~~~--~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 305 PEAIIQAIEKALSD--KDFYRKLKN--RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHC--S--TT-SS-HHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--hHHHHhhcc--CCCCCCCCcHHHHHHHhh
Confidence 99999999999986 344443322 123455556666666655
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.2e-05 Score=72.98 Aligned_cols=34 Identities=29% Similarity=0.463 Sum_probs=28.5
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
|||+|+... +.++..++++|.++||+|++++++.
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~ 34 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRN 34 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 789998763 2367899999999999999999963
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.0083 Score=62.93 Aligned_cols=223 Identities=17% Similarity=0.108 Sum_probs=142.5
Q ss_pred hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHHHHHH
Q 007212 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 394 (612)
.-||.-++.++..++.|.+ .|++.+ +|.++-|.+ |.-.+.-. +..........
T Consensus 144 ~~S~~hfapte~ar~nLl~---EG~~~~------~IfvtGnt~iDal~~~~~-----------------~~~~~~~~~~~ 197 (383)
T COG0381 144 HLSDLHFAPTEIARKNLLR---EGVPEK------RIFVTGNTVIDALLNTRD-----------------RVLEDSKILAK 197 (383)
T ss_pred HhhhhhcCChHHHHHHHHH---cCCCcc------ceEEeCChHHHHHHHHHh-----------------hhccchhhHHh
Confidence 3589999999999999997 777755 788887754 22111100 00001112222
Q ss_pred -hCCCCCCCCcEEEEEccCcc-ccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHH
Q 007212 395 -VGLPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 395 -~gl~~~~~~~~i~~iGrl~~-~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 470 (612)
++.. .++.+++..=|-+- .+++..+++++.++.+ ++++++.--...+...+.. ....+...++..+..+.-..
T Consensus 198 ~~~~~--~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~-~~~L~~~~~v~li~pl~~~~ 274 (383)
T COG0381 198 GLDDK--DKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELV-LKRLKNVERVKLIDPLGYLD 274 (383)
T ss_pred hhccc--cCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHH-HHHhCCCCcEEEeCCcchHH
Confidence 2222 22355555556543 3899999999988876 4777666544332232222 22222224588888888888
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
.+.++..|-+++- ..|..+=||-..|+||++-+.. .-+|.++.| +-.+ -..|.+.+.+.+..
T Consensus 275 f~~L~~~a~~ilt-----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~l-----------vg~~~~~i~~~~~~ 337 (383)
T COG0381 275 FHNLMKNAFLILT-----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNIL-----------VGTDEENILDAATE 337 (383)
T ss_pred HHHHHHhceEEEe-----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEE-----------eCccHHHHHHHHHH
Confidence 8889999966663 3578899999999999988753 345666554 3333 45688999999999
Q ss_pred HHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Q 007212 550 ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
++++ ++.+++|+.. ...|.--+.++++.+++++-.
T Consensus 338 ll~~--~~~~~~m~~~--~npYgdg~as~rIv~~l~~~~ 372 (383)
T COG0381 338 LLED--EEFYERMSNA--KNPYGDGNASERIVEILLNYF 372 (383)
T ss_pred HhhC--hHHHHHHhcc--cCCCcCcchHHHHHHHHHHHh
Confidence 9998 6677666553 455666666777777666544
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00027 Score=73.69 Aligned_cols=193 Identities=14% Similarity=0.074 Sum_probs=118.1
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (612)
....+.+|.++++=|...+.+.+ +|.+ .+.|-|.+ |.-.+.+ +++.
T Consensus 131 ~~i~~~~D~lLailPFE~~~y~k---~g~~---------~~yVGHpl~d~i~~~~---------------------~r~~ 177 (381)
T COG0763 131 VKIAKYVDHLLAILPFEPAFYDK---FGLP---------CTYVGHPLADEIPLLP---------------------DREA 177 (381)
T ss_pred HHHHHHhhHeeeecCCCHHHHHh---cCCC---------eEEeCChhhhhccccc---------------------cHHH
Confidence 34566799999999999988886 4432 23333322 2211222 2677
Q ss_pred HHHHhCCCCCCCCcEEEEEcc-Ccc-ccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc
Q 007212 391 LQAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 466 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGr-l~~-~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~ 466 (612)
.++++|++.+. +.+.+..|. -.+ .+-...+.+|+..++. ++.++++--... ..+.+.....+.+. .......
T Consensus 178 ar~~l~~~~~~-~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~--~~~~~~~~~~~~~~-~~~~~~~ 253 (381)
T COG0763 178 AREKLGIDADE-KTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA--KYRRIIEEALKWEV-AGLSLIL 253 (381)
T ss_pred HHHHhCCCCCC-CeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH--HHHHHHHHHhhccc-cCceEEe
Confidence 99999998764 345566664 333 5678889999999974 789998866544 22223333222221 1112223
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCc----------------ccceecCcceEEecccc
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGL----------------VDTVEEGFTGFQMGSFS 529 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~----------------~e~v~~g~~G~~~~~~~ 529 (612)
.+...++.+..||+.+..| |.+.||++.+|+|.|++ .+..+ +.++-+. .+++++-
T Consensus 254 ~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~---~ivPEli 325 (381)
T COG0763 254 IDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGR---EIVPELI 325 (381)
T ss_pred cCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCC---ccchHHH
Confidence 3445567899999988654 89999999999999876 33322 2222111 1111110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhh
Q 007212 530 VDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 530 ~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
-....++.+++++..++.+.
T Consensus 326 -----q~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 326 -----QEDCTPENLARALEELLLNG 345 (381)
T ss_pred -----hhhcCHHHHHHHHHHHhcCh
Confidence 12345788999999998883
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.0018 Score=68.74 Aligned_cols=192 Identities=18% Similarity=0.148 Sum_probs=116.5
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
+..-+.+|.++++=|+..+.+.+ .|+ +++.+-|.+= +...+.. .+...
T Consensus 128 ~~i~~~~D~ll~ifPFE~~~y~~---~g~---------~~~~VGHPl~-d~~~~~~-------------------~~~~~ 175 (373)
T PF02684_consen 128 KKIKKYVDHLLVIFPFEPEFYKK---HGV---------PVTYVGHPLL-DEVKPEP-------------------DRAEA 175 (373)
T ss_pred HHHHHHHhheeECCcccHHHHhc---cCC---------CeEEECCcch-hhhccCC-------------------CHHHH
Confidence 44456789999999999998886 454 3444444321 1111111 03445
Q ss_pred HHHhCCCCCCCCcEEEEEcc-Ccc-ccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccC
Q 007212 392 QAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~iGr-l~~-~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 467 (612)
++.+ ++.++ ..+.+..|. -.+ .+.+..++++++.+.+ +++++++..... ...+.+++.....+..+.....
T Consensus 176 ~~~~-l~~~~-~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~~~-- 250 (373)
T PF02684_consen 176 REKL-LDPDK-PIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIVII-- 250 (373)
T ss_pred HHhc-CCCCC-cEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEEEc--
Confidence 5555 66443 234455554 334 4567999999999976 789998876543 3444455555444433332221
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCC----------------cccceecCcceEEeccccc
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGG----------------LVDTVEEGFTGFQMGSFSV 530 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg----------------~~e~v~~g~~G~~~~~~~~ 530 (612)
.......+++||+.+..| |.+.||++.+|+|.|+. .++. ++.++-+. -+++++
T Consensus 251 ~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~---~v~PEl-- 320 (373)
T PF02684_consen 251 EGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGR---EVVPEL-- 320 (373)
T ss_pred CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCC---Ccchhh--
Confidence 223446899999999766 89999999999998754 3432 22222211 112222
Q ss_pred ccccCCCCCHHHHHHHHHHHHHh
Q 007212 531 DCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 531 ~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+-+..+++.+++.+..++++
T Consensus 321 ---iQ~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 321 ---IQEDATPENIAAELLELLEN 340 (373)
T ss_pred ---hcccCCHHHHHHHHHHHhcC
Confidence 12456899999999999988
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0026 Score=70.72 Aligned_cols=196 Identities=14% Similarity=0.114 Sum_probs=113.3
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (612)
+..-+..|.++++=|...+.+.+ .|+ +++.+-|.. |. ..+.. .+++
T Consensus 356 kki~k~vD~ll~IfPFE~~~y~~---~gv---------~v~yVGHPL~d~--i~~~~-------------------~~~~ 402 (608)
T PRK01021 356 TILEKYLDLLLLILPFEQNLFKD---SPL---------RTVYLGHPLVET--ISSFS-------------------PNLS 402 (608)
T ss_pred HHHHHHhhhheecCccCHHHHHh---cCC---------CeEEECCcHHhh--cccCC-------------------CHHH
Confidence 44456789999999999888886 454 334444432 22 11111 1556
Q ss_pred HHHHhCCCCCCCCcEEEEEcc-Ccc-ccCHHHHHHHHH--hcccCCeEEEEEecCChhHHHHHHHHHHHCC-CceEEEec
Q 007212 391 LQAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIP--HFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAK 465 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGr-l~~-~Kg~d~li~A~~--~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~ 465 (612)
.++++|++.+. ..+-+..|. -.+ .+.+..+++|++ .+. ++.++++.... ....+.+++.....+ ..+....
T Consensus 403 ~r~~lgl~~~~-~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~-~~l~fvvp~a~-~~~~~~i~~~~~~~~~~~~~ii~- 478 (608)
T PRK01021 403 WKEQLHLPSDK-PIVAAFPGSRRGDILRNLTIQVQAFLASSLA-STHQLLVSSAN-PKYDHLILEVLQQEGCLHSHIVP- 478 (608)
T ss_pred HHHHcCCCCCC-CEEEEECCCCHHHHHHHHHHHHHHHHHHHhc-cCeEEEEecCc-hhhHHHHHHHHhhcCCCCeEEec-
Confidence 78889996543 334455554 333 567899999998 553 46888775432 234455555543322 1122221
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceec-------CcceE---Eeccccccccc
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEE-------GFTGF---QMGSFSVDCEA 534 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~-------g~~G~---~~~~~~~~~~~ 534 (612)
+...++++++||+.+..| |.+.||++.+|+|.|+. ..+.+.-.+.. ..-|+ +.| -.+-.++
T Consensus 479 --~~~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIag-r~VvPEl 550 (608)
T PRK01021 479 --SQFRYELMRECDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILG-STIFPEF 550 (608)
T ss_pred --CcchHHHHHhcCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcC-CCcchhh
Confidence 112357999999999776 89999999999998764 33322221110 00000 000 0111233
Q ss_pred C---CCCCHHHHHHHHHHHHHh
Q 007212 535 V---DPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 535 v---~~~d~~~la~~i~~ll~~ 553 (612)
+ +..+++.+++.+ +++.+
T Consensus 551 lqgQ~~~tpe~La~~l-~lL~d 571 (608)
T PRK01021 551 IGGKKDFQPEEVAAAL-DILKT 571 (608)
T ss_pred cCCcccCCHHHHHHHH-HHhcC
Confidence 3 456789999986 77776
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0057 Score=68.17 Aligned_cols=122 Identities=11% Similarity=0.021 Sum_probs=79.8
Q ss_pred cEEEEEccCcc-----ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--H
Q 007212 404 PVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--A 476 (612)
Q Consensus 404 ~~i~~iGrl~~-----~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~ 476 (612)
++++..|.... .+-...+++|++.+ +.++++..++.. . . ...|+++.....++... ++ .
T Consensus 298 ~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~-~-~------~~~p~Nv~i~~w~Pq~~---lL~hp 363 (507)
T PHA03392 298 VVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV-E-A------INLPANVLTQKWFPQRA---VLKHK 363 (507)
T ss_pred EEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc-C-c------ccCCCceEEecCCCHHH---HhcCC
Confidence 67777888642 33456777777776 457666554431 1 0 23466787766666543 67 4
Q ss_pred hccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCC--CCHHHHHHHHHHH
Q 007212 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRA 550 (612)
Q Consensus 477 ~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~--~d~~~la~~i~~l 550 (612)
.++++|. -|=..++.||+.+|+|+|+-...+ ...-+.+-+.|... +. -+.+++.++|.++
T Consensus 364 ~v~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l----------~~~~~t~~~l~~ai~~v 429 (507)
T PHA03392 364 NVKAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRAL----------DTVTVSAAQLVLAIVDV 429 (507)
T ss_pred CCCEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEe----------ccCCcCHHHHHHHHHHH
Confidence 5888883 333567999999999999876532 33334444567654 33 3678999999999
Q ss_pred HHh
Q 007212 551 LAT 553 (612)
Q Consensus 551 l~~ 553 (612)
+++
T Consensus 430 l~~ 432 (507)
T PHA03392 430 IEN 432 (507)
T ss_pred hCC
Confidence 987
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00065 Score=73.65 Aligned_cols=178 Identities=16% Similarity=0.059 Sum_probs=103.9
Q ss_pred HHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC---CceEEEec
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAK 465 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~v~~~~~ 465 (612)
.|+++|||.+. ++++...++ .|=.+..++++.++.+ |+..|++...+. ..++.+++...+.+ +++.+...
T Consensus 275 ~R~~~gLp~d~--vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~-~~~~~l~~~~~~~Gv~~~Ri~f~~~ 349 (468)
T PF13844_consen 275 TRAQYGLPEDA--VVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPA-SGEARLRRRFAAHGVDPDRIIFSPV 349 (468)
T ss_dssp ETGGGT--SSS--EEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETST-THHHHHHHHHHHTTS-GGGEEEEE-
T ss_pred CHHHcCCCCCc--eEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCH-HHHHHHHHHHHHcCCChhhEEEcCC
Confidence 37889999654 566665554 6666777777777765 899998876543 23455555555543 57777665
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCccccee------cCcceEEecccccccccCCCCC
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~------~g~~G~~~~~~~~~~~~v~~~d 539 (612)
-..++.-..++.+|+++=|.-+ +-+.+.+||+.+|+|||+-....+..=+. -|..-+ -..|
T Consensus 350 ~~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El------------IA~s 416 (468)
T PF13844_consen 350 APREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL------------IADS 416 (468)
T ss_dssp --HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG------------B-SS
T ss_pred CCHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh------------cCCC
Confidence 5555544678999999977432 34688999999999999876433322111 011222 2367
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHH---H--HhhcCcHHHHHHHHHHHHHHH
Q 007212 540 VAAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 540 ~~~la~~i~~ll~~~~~~~~~~~~~~~---~--~~~fsw~~~a~~~~~~y~~l~ 588 (612)
.++.++...++.++ .+.++++.++- + ..-|+-...++++++.|+.+.
T Consensus 417 ~~eYv~~Av~La~D--~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~mW 468 (468)
T PF13844_consen 417 EEEYVEIAVRLATD--PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQMW 468 (468)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHhC
Confidence 89999998898888 44444443332 2 345888999999999998763
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0009 Score=72.38 Aligned_cols=158 Identities=17% Similarity=0.148 Sum_probs=95.9
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
.++....|..... .+.+-.+++.+.+-+.++++...+.+ ......++++.....++... ++..||++|
T Consensus 238 ~~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~-------~~~~~~p~n~~v~~~~p~~~---~l~~ad~vI 305 (406)
T COG1819 238 PIVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGAR-------DTLVNVPDNVIVADYVPQLE---LLPRADAVI 305 (406)
T ss_pred CeEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEeccccc-------cccccCCCceEEecCCCHHH---HhhhcCEEE
Confidence 3566667776655 44444444444445888888764421 11123455666665555544 799999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCC----CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHH
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 558 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~ 558 (612)
...- -.++.||+.+|+|+|+-..+ ...+-+++-+.|... ..+....+.++++|.+++++..-..
T Consensus 306 ~hGG----~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l--------~~~~l~~~~l~~av~~vL~~~~~~~ 373 (406)
T COG1819 306 HHGG----AGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL--------PFEELTEERLRAAVNEVLADDSYRR 373 (406)
T ss_pred ecCC----cchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec--------CcccCCHHHHHHHHHHHhcCHHHHH
Confidence 6653 45789999999999877544 244556666778765 2346899999999999999732122
Q ss_pred HHHHHHHHHHhhcCcHHHHHHHHHHH
Q 007212 559 LAEMMKNGMAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 559 ~~~~~~~~~~~~fsw~~~a~~~~~~y 584 (612)
..+..++.+.+.-.-+..++..++..
T Consensus 374 ~~~~~~~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 374 AAERLAEEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred HHHHHHHHhhhcccHHHHHHHHHHHH
Confidence 22222222344444444444444433
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0029 Score=66.79 Aligned_cols=209 Identities=18% Similarity=0.116 Sum_probs=132.7
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+.+..++..|.|++.|+..++.+.+ .|.. ++.+.-| ........ .......
T Consensus 169 ~~~~~~~~~i~li~aQse~D~~Rf~~---LGa~--------~v~v~GN---lKfd~~~~--------------~~~~~~~ 220 (419)
T COG1519 169 FLARLLFKNIDLILAQSEEDAQRFRS---LGAK--------PVVVTGN---LKFDIEPP--------------PQLAAEL 220 (419)
T ss_pred HHHHHHHHhcceeeecCHHHHHHHHh---cCCc--------ceEEecc---eeecCCCC--------------hhhHHHH
Confidence 45677889999999999999999998 6765 3333333 21111111 1112234
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEE---
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV--- 463 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~--- 463 (612)
..++..++.+ +++++..+. +..--+.+++++.++++ ++..++++=. .++-.+.++++..+.+-.+..+
T Consensus 221 ~~~r~~l~~~----r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPR-HpERf~~v~~l~~~~gl~~~~rS~~ 293 (419)
T COG1519 221 AALRRQLGGH----RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPR-HPERFKAVENLLKRKGLSVTRRSQG 293 (419)
T ss_pred HHHHHhcCCC----CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecC-ChhhHHHHHHHHHHcCCeEEeecCC
Confidence 5677777653 368888887 34445668999999877 5777766654 3444555666666543222111
Q ss_pred -----------eccChHHHHHHHHhccEEEEcCCCC-CCcHHHHHHHHcCCceEEcC-CCCccccee---cCcceEEecc
Q 007212 464 -----------AKFNIPLAHMIIAGADFILIPSRFE-PCGLIQLHAMRYGTVPIVAS-TGGLVDTVE---EGFTGFQMGS 527 (612)
Q Consensus 464 -----------~~~~~~~~~~i~~~aDv~v~pS~~E-~~gl~~lEAma~G~PvI~s~-~gg~~e~v~---~g~~G~~~~~ 527 (612)
+.--++ +..+|..||+.++--.+- -=|--+||+.++|+|+|.-. +-...|+.+ ..+.|+.+
T Consensus 294 ~~~~~~tdV~l~DtmGE-L~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v-- 370 (419)
T COG1519 294 DPPFSDTDVLLGDTMGE-LGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQV-- 370 (419)
T ss_pred CCCCCCCcEEEEecHhH-HHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEE--
Confidence 111122 346899999988776553 34557999999999999765 334444333 34456654
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 007212 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 567 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 567 (612)
.|.+.+++.+..++.+ ...++++++++.
T Consensus 371 ----------~~~~~l~~~v~~l~~~--~~~r~~~~~~~~ 398 (419)
T COG1519 371 ----------EDADLLAKAVELLLAD--EDKREAYGRAGL 398 (419)
T ss_pred ----------CCHHHHHHHHHHhcCC--HHHHHHHHHHHH
Confidence 5678888888888877 677788877773
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0042 Score=62.82 Aligned_cols=185 Identities=20% Similarity=0.238 Sum_probs=111.4
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
+..+..||.+++.+......+.. +|..+.++..-..+.-+.| ...|.|. .++
T Consensus 121 kl~~Pla~~ii~P~~~~~~~~~~---~G~~p~~i~~~~giae~~~---v~~f~pd----------------------~ev 172 (346)
T COG1817 121 KLTLPLADVIITPEAIDEEELLD---FGADPNKISGYNGIAELAN---VYGFVPD----------------------PEV 172 (346)
T ss_pred hcchhhhhheecccccchHHHHH---hCCCccceecccceeEEee---cccCCCC----------------------HHH
Confidence 44677899999999888877775 6766554443334444433 2335554 457
Q ss_pred HHHhCCCCCCCCcEEEE-Ecc-----CccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEec
Q 007212 392 QAEVGLPVDRNIPVIGF-IGR-----LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~-iGr-----l~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 465 (612)
.+++|+..+. +.|++ .-. ...+++.+.+.++++.|.+.. ++++-... +..+.+ +.+.+.+ ...
T Consensus 173 lkeLgl~~~~--~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr~~-~~~eif----e~~~n~i--~pk 241 (346)
T COG1817 173 LKELGLEEGE--TYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPREK-EQAEIF----EGYRNII--IPK 241 (346)
T ss_pred HHHcCCCCCC--ceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecCch-hHHHHH----hhhcccc--CCc
Confidence 8889998652 34433 111 235778888999999996544 44444322 222222 2322111 111
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC---CcccceecCcceEEecccccccccCCCCCHHH
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 542 (612)
-..+.+ .++-.|++++ -+-|.-.-||...|+|.|...-| +..+...+ .|.++ ...|+.+
T Consensus 242 ~~vD~l-~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~lie--~G~~~----------~s~~~~~ 303 (346)
T COG1817 242 KAVDTL-SLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLIE--KGLLY----------HSTDEIA 303 (346)
T ss_pred ccccHH-HHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHHh--cCcee----------ecCCHHH
Confidence 111212 4677788887 34567789999999999988744 23333333 57766 6677777
Q ss_pred HHHHHHHHHHh
Q 007212 543 VSTTVRRALAT 553 (612)
Q Consensus 543 la~~i~~ll~~ 553 (612)
..+.+.+.+.+
T Consensus 304 ~~~~a~~~l~~ 314 (346)
T COG1817 304 IVEYAVRNLKY 314 (346)
T ss_pred HHHHHHHHhhc
Confidence 77777777766
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0022 Score=67.15 Aligned_cols=119 Identities=13% Similarity=0.161 Sum_probs=72.0
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
.+++|.|. -+...+++++.++ +++.+++ |..+. .. ..+++++... .+..+.+..++..||++|.
T Consensus 190 ~iLv~~g~----~~~~~l~~~l~~~--~~~~~i~-~~~~~-~~-------~~~~~~v~~~-~~~~~~~~~~l~~ad~vI~ 253 (321)
T TIGR00661 190 YILVYIGF----EYRYKILELLGKI--ANVKFVC-YSYEV-AK-------NSYNENVEIR-RITTDNFKELIKNAELVIT 253 (321)
T ss_pred cEEEECCc----CCHHHHHHHHHhC--CCeEEEE-eCCCC-Cc-------cccCCCEEEE-ECChHHHHHHHHhCCEEEE
Confidence 45566544 3456777887776 4555544 43221 11 1234456655 4554556789999999997
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCccc------ceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 484 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e------~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
-+-+ .++.||+++|+|+|+....+..| .+.+.+.|... +..+. ++.+++...+++
T Consensus 254 ~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l----------~~~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 254 HGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL----------EYKEL-RLLEAILDIRNM 314 (321)
T ss_pred CCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc----------ChhhH-HHHHHHHhcccc
Confidence 6632 46999999999999988765444 34444567654 55665 444444444443
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.19 Score=54.64 Aligned_cols=215 Identities=13% Similarity=0.114 Sum_probs=111.7
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+.+..++++|.|.+=-+.-.+.+.+ .|++.. ++.+.+ |+.+.-|.... . ....
T Consensus 168 ~l~r~vl~~~~~ItvRD~~S~~~Lk~---lGv~~~------~v~~~a---DpAF~L~~~~~-------------~-~~~~ 221 (426)
T PRK10017 168 QLANYVFGHCDALILRESVSLDLMKR---SNITTA------KVEHGV---DTAWLVDHHTE-------------D-FTAS 221 (426)
T ss_pred HHHHHHHhcCCEEEEccHHHHHHHHH---hCCCcc------ceEEec---ChhhhCCcccc-------------c-cccc
Confidence 34577889999987777766777765 676533 444443 54432221100 0 0000
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcc-Ccc---------ccCHHHHHHHHHhcccCCeEEEEEec--C----ChhHHHHHHHH
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGR-LEE---------QKGSDILAAAIPHFIKENVQIIVLGT--G----KKPMEKQLEQL 452 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGr-l~~---------~Kg~d~li~A~~~l~~~~~~lvivG~--g----~~~~~~~l~~l 452 (612)
..+....+.+. ..++|++.-| +.+ +.-...+.+++..+.+.+.+++++-. + .+......+++
T Consensus 222 ~~~~~~~~~~~--~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l 299 (426)
T PRK10017 222 YAVQHWLDVAA--QQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNL 299 (426)
T ss_pred hhhhhhhcccc--cCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHH
Confidence 01111122222 2246655433 321 11224566777777666666665543 1 11122223344
Q ss_pred HHHCCC--ceE-EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC-cccceec-CcceEEecc
Q 007212 453 EILYPE--KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEE-GFTGFQMGS 527 (612)
Q Consensus 453 ~~~~~~--~v~-~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~-g~~G~~~~~ 527 (612)
...++. ++. ....++..++..+++.||++|-.-. =.++=|++.|+|+|+-.... ...++++ |...+.+
T Consensus 300 ~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~-- 372 (426)
T PRK10017 300 RQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAI-- 372 (426)
T ss_pred HHhcccccceeEecCCCChHHHHHHHhhCCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEe--
Confidence 444332 222 2334666677789999999874433 24566999999999877521 1222221 1122221
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 007212 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG 566 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~ 566 (612)
-++.-+.++|.+.+.+++++ .+.+++.-++.
T Consensus 373 ------~~~~l~~~~Li~~v~~~~~~--r~~~~~~l~~~ 403 (426)
T PRK10017 373 ------DIRHLLDGSLQAMVADTLGQ--LPALNARLAEA 403 (426)
T ss_pred ------chhhCCHHHHHHHHHHHHhC--HHHHHHHHHHH
Confidence 12455678999999999998 54444433333
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.021 Score=58.23 Aligned_cols=165 Identities=16% Similarity=0.163 Sum_probs=110.5
Q ss_pred cEEEEEccC-ccccCHHHHHHHHHhcccCCeEEEE-Eec--CChhHHHHHHHHHHHC-C-CceEEEecc-ChHHHHHHHH
Q 007212 404 PVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIV-LGT--GKKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 476 (612)
Q Consensus 404 ~~i~~iGrl-~~~Kg~d~li~A~~~l~~~~~~lvi-vG~--g~~~~~~~l~~l~~~~-~-~~v~~~~~~-~~~~~~~i~~ 476 (612)
++-+.+|+= ++.-++..+++++++....++++++ +|- |++.|.+++.+.+.++ + +++.....+ +-++...+++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 455566765 5778888999999888778888776 354 6788999999988874 4 577766665 4455568999
Q ss_pred hccEEEEcCC-CCCCcHHHHHHHHcCCceEEcC-CCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007212 477 GADFILIPSR-FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 477 ~aDv~v~pS~-~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
.||+.++--. .++.|+.++ .+..|+||+.++ +.-..++.+.|. -++| . -+.-|...+.++=+++
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv-~Vlf---~-----~d~L~~~~v~e~~rql---- 291 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGL-PVLF---T-----GDDLDEDIVREAQRQL---- 291 (322)
T ss_pred hCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCC-eEEe---c-----CCcccHHHHHHHHHHH----
Confidence 9999998775 589999877 799999998885 455556555443 3323 0 0222322222211111
Q ss_pred CHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 555 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 555 ~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
...-++.+. |+-++..+.|.++|..+..
T Consensus 292 -----~~~dk~~I~--Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 292 -----ASVDKNIIA--FFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred -----HhhCcceee--ecCHhHHHHHHHHHHHhhC
Confidence 111112223 9999999999999987654
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0081 Score=64.71 Aligned_cols=156 Identities=14% Similarity=0.094 Sum_probs=86.4
Q ss_pred CcEEEEEccCcccc--CHHHHHHHHHhcccCCeEEE-EEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 403 IPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 403 ~~~i~~iGrl~~~K--g~d~li~A~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
.++++..|.+...+ -++.+++++.+ .+++++ ..|.+.. ...+. ..++++......+.. .+++.||
T Consensus 226 ~~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~g~~~~--~~~~~----~~~~~v~~~~~~p~~---~ll~~~~ 293 (392)
T TIGR01426 226 PVVLISLGTVFNNQPSFYRTCVEAFRD---LDWHVVLSVGRGVD--PADLG----ELPPNVEVRQWVPQL---EILKKAD 293 (392)
T ss_pred CEEEEecCccCCCCHHHHHHHHHHHhc---CCCeEEEEECCCCC--hhHhc----cCCCCeEEeCCCCHH---HHHhhCC
Confidence 35677788864332 22334444433 355655 4455431 11222 234567655554432 5799999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 555 (612)
++|..+- ..+++||+++|+|+|+....+ ..+.+.+.+.|..+. -..-+.++++++|++++.++.
T Consensus 294 ~~I~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~--------~~~~~~~~l~~ai~~~l~~~~ 361 (392)
T TIGR01426 294 AFITHGG----MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP--------PEEVTAEKLREAVLAVLSDPR 361 (392)
T ss_pred EEEECCC----chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec--------cccCCHHHHHHHHHHHhcCHH
Confidence 9996553 247899999999999976443 223344445666541 123367899999999998732
Q ss_pred H-HHHHHHHHHHHHhhcCcHHHHHHHHHH
Q 007212 556 T-QALAEMMKNGMAQDLSWKGPAKKWEET 583 (612)
Q Consensus 556 ~-~~~~~~~~~~~~~~fsw~~~a~~~~~~ 583 (612)
- +..+++.+. +.+.-.-+..++..+++
T Consensus 362 ~~~~~~~l~~~-~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 362 YAERLRKMRAE-IREAGGARRAADEIEGF 389 (392)
T ss_pred HHHHHHHHHHH-HHHcCCHHHHHHHHHHh
Confidence 1 122222222 23333445555555443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.063 Score=56.05 Aligned_cols=188 Identities=12% Similarity=0.063 Sum_probs=121.1
Q ss_pred CeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcc
Q 007212 350 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 429 (612)
Q Consensus 350 ~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~ 429 (612)
+...++.++|.+.|.|.... ..-.--+.++|.-.+. ..+.++++.
T Consensus 162 ~~~~~~~a~d~~~~~~i~~d------------------------------a~~~~dL~~ign~~pD-----r~e~~ke~~ 206 (373)
T COG4641 162 NCYYLPWAVDDSLFHPIPPD------------------------------ASYDVDLNLIGNPYPD-----RVEEIKEFF 206 (373)
T ss_pred ceeccCccCCchhcccCCcc------------------------------ccceeeeEEecCCCcc-----HHHHHHHHh
Confidence 77889999999988876420 0112358888887665 344444432
Q ss_pred c-C------CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccCh-HHHHHHHHhccEEEEcCCC---CC---CcHHHH
Q 007212 430 K-E------NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI-PLAHMIIAGADFILIPSRF---EP---CGLIQL 495 (612)
Q Consensus 430 ~-~------~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~-~~~~~i~~~aDv~v~pS~~---E~---~gl~~l 495 (612)
. + +-++...|..- -..+.. .....++...++++. ...+..++.-|+.+.-++. ++ +.+-++
T Consensus 207 ~~ps~kl~v~rr~~~~g~~y---~~~~~~--~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvF 281 (373)
T COG4641 207 VEPSFKLMVDRRFYVLGPRY---PDDIWG--RTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVF 281 (373)
T ss_pred hccchhhhccceeeecCCcc---chhhhc--ccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHH
Confidence 2 1 34566666651 111111 111112333344444 4555678888887776653 22 367899
Q ss_pred HHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhhcCcH
Q 007212 496 HAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWK 574 (612)
Q Consensus 496 EAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~~fsw~ 574 (612)
|+++||.+.|++..-++.-++.+|..-. -..|..++.+.++.++..+. +.+..+.+.+.+...|+.+
T Consensus 282 eiagc~~~liT~~~~~~e~~f~pgk~~i------------v~~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~ 349 (373)
T COG4641 282 EIAGCGGFLITDYWKDLEKFFKPGKDII------------VYQDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYE 349 (373)
T ss_pred HHhhcCCccccccHHHHHHhcCCchheE------------EecCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHH
Confidence 9999999999998888888888876555 45899999999999999842 2344444444456669999
Q ss_pred HHHHHHHHHHHHHHH
Q 007212 575 GPAKKWEETLLNLEV 589 (612)
Q Consensus 575 ~~a~~~~~~y~~l~~ 589 (612)
.-+.++.+...++..
T Consensus 350 ~r~~~~~~~i~sI~~ 364 (373)
T COG4641 350 ERIFKLLNEIASINI 364 (373)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888877776543
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.34 Score=50.36 Aligned_cols=164 Identities=15% Similarity=0.141 Sum_probs=109.1
Q ss_pred cEEEEEccC-ccccCHHHHHHHHHhcccCCeEEEE-EecC--ChhHHHHHHHHHHHC-C-CceEEEecc-ChHHHHHHHH
Q 007212 404 PVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIV-LGTG--KKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 476 (612)
Q Consensus 404 ~~i~~iGrl-~~~Kg~d~li~A~~~l~~~~~~lvi-vG~g--~~~~~~~l~~l~~~~-~-~~v~~~~~~-~~~~~~~i~~ 476 (612)
+.-+.+|+= ++.-++-.+++++++....++++++ +|-| .++|.+++.+.+.++ + +++.....+ +-++...+++
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~ 264 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLS 264 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHH
Confidence 455566664 5777888888888876557788766 3444 467888888888874 4 356555444 5566668999
Q ss_pred hccEEEEcCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007212 477 GADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 477 ~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 555 (612)
.||+.++.... .+.|+.++ .+.+|+||+.+....+-..+.+..--++| ..|.-|.+.+.++=+++..-.
T Consensus 265 ~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~~ipVlf--------~~d~L~~~~v~ea~rql~~~d- 334 (360)
T PF07429_consen 265 RCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQGIPVLF--------YGDELDEALVREAQRQLANVD- 334 (360)
T ss_pred hCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhCCCeEEe--------ccccCCHHHHHHHHHHHhhCc-
Confidence 99999999864 89999877 79999999998876555555554333444 124445555555544444321
Q ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 556 TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 556 ~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
. + .-.|.-.+..+.|.+.+..+
T Consensus 335 k--------~--~iaFf~pny~~~w~~~l~~~ 356 (360)
T PF07429_consen 335 K--------Q--QIAFFAPNYLQGWRQALRLA 356 (360)
T ss_pred c--------c--ceeeeCCchHHHHHHHHHHH
Confidence 0 1 12366677777787777644
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.041 Score=58.78 Aligned_cols=199 Identities=14% Similarity=0.137 Sum_probs=96.9
Q ss_pred HHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHH
Q 007212 311 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 311 ~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (612)
........|.+++.|+...+.+.+. +|.+.+ .++..|..- ++. +.......++.
T Consensus 128 ~~~~~~~~d~~~~~s~~~~~~~~~~--f~~~~~--------~i~~~G~PR--~D~--------------l~~~~~~~~~~ 181 (369)
T PF04464_consen 128 YKRNYRNYDYFIVSSEFEKEIFKKA--FGYPED--------KILVTGYPR--NDY--------------LFNKSKENRNR 181 (369)
T ss_dssp HHHHHTT-SEEEESSHHHHHHHHHH--TT--GG--------GEEES--GG--GHH--------------HHHSTT-HHHH
T ss_pred hhhhccCCcEEEECCHHHHHHHHHH--hccCcc--------eEEEeCCCe--EhH--------------HhccCHHHHHH
Confidence 4456778999999999999988852 555533 344555531 100 00111122567
Q ss_pred HHHHhCCCCCCCCcEEEEEccCccccCH--------HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGS--------DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl~~~Kg~--------d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
+++.++++.+ +.+|+|+=.+...... ..-.+.+..+.+.++.+++-... ......... .....++..
T Consensus 182 i~~~~~~~~~--~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~Hp--~~~~~~~~~-~~~~~~i~~ 256 (369)
T PF04464_consen 182 IKKKLGIDKD--KKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPHP--NMKKKFKDF-KEDNSNIIF 256 (369)
T ss_dssp HHHHTT--SS---EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--SH--HHHTT-----TT-TTTEEE
T ss_pred HHHHhccCCC--CcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeCc--hhhhchhhh-hccCCcEEE
Confidence 8888888754 4699998666443322 11223333344468877776542 233333222 222334544
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc--CCCCcccceecCcceEEecccccccccCCCCCH
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA--STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 540 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s--~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~ 540 (612)
.... ..+..++..||++|- -++-+++|++.+++|+|.- |..... + ..|+.+. +..++--....+.
T Consensus 257 ~~~~--~~~~~ll~~aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~----~-~rg~~~~-~~~~~pg~~~~~~ 323 (369)
T PF04464_consen 257 VSDN--EDIYDLLAAADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYE----K-ERGFYFD-YEEDLPGPIVYNF 323 (369)
T ss_dssp -TT---S-HHHHHHT-SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTT----T-TSSBSS--TTTSSSS-EESSH
T ss_pred CCCC--CCHHHHHHhcCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHh----h-ccCCCCc-hHhhCCCceeCCH
Confidence 3332 356689999999992 2567899999999999954 432111 1 1233221 0000000023689
Q ss_pred HHHHHHHHHHHHh
Q 007212 541 AAVSTTVRRALAT 553 (612)
Q Consensus 541 ~~la~~i~~ll~~ 553 (612)
++|.++|+.++++
T Consensus 324 ~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 324 EELIEAIENIIEN 336 (369)
T ss_dssp HHHHHHHTTHHHH
T ss_pred HHHHHHHHhhhhC
Confidence 9999999998876
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.029 Score=61.21 Aligned_cols=180 Identities=14% Similarity=0.066 Sum_probs=111.6
Q ss_pred HHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCC-hhHHHHHHHHHHHCC---CceEEEec
Q 007212 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYP---EKARGVAK 465 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~---~~v~~~~~ 465 (612)
|.++|||++. .++++.+ ...|-...+++...++.+ |+-.|++.|.|+ ++....+++++++.+ .++++.+.
T Consensus 421 R~~lglp~~a--vVf~c~~--n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLPEDA--VVFCCFN--NYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCCCCe--EEEEecC--CcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 7788999653 4444444 456665666666665555 888888888765 577888999988765 57788888
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc-----ccee-cCcceEEecccccccccCCCCC
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-----DTVE-EGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-----e~v~-~g~~G~~~~~~~~~~~~v~~~d 539 (612)
-..+....-+.-||+++=+.-+ +-..+.+||+.+|+||++-.-.-+. .++. -|..-+ |.. +
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~-----------vA~-s 563 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPEL-----------VAD-S 563 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchh-----------hcC-C
Confidence 7777666889999999955432 3456899999999999875321111 0111 111111 122 3
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHH---H--HhhcCcHHHHHHHHHHHHHHHHc
Q 007212 540 VAAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 540 ~~~la~~i~~ll~~~~~~~~~~~~~~~---~--~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
.++.++.-..+-++ ...+++....- + ..-|+.+..+++++.+|.++..+
T Consensus 564 ~~dYV~~av~~g~d--ral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 564 RADYVEKAVAFGSD--RALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred HHHHHHHHHHhccc--HHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence 33333333233333 22222221111 1 13588999999999999998754
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.15 Score=50.56 Aligned_cols=103 Identities=12% Similarity=0.014 Sum_probs=56.1
Q ss_pred CCcEEEEEccCccccCH--HHHHHHHHhccc----CCeEEEEEecCC--hhHHHHHHHHHHHCCCceEEEecc--ChHHH
Q 007212 402 NIPVIGFIGRLEEQKGS--DILAAAIPHFIK----ENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKF--NIPLA 471 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~--d~li~A~~~l~~----~~~~lvivG~g~--~~~~~~l~~l~~~~~~~v~~~~~~--~~~~~ 471 (612)
...+-+++|.-.++-.+ |...+.+..+.+ ....|++--+.. +.....++.--...+ ..+...- ...-.
T Consensus 161 rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~--~i~w~~~d~g~NPY 238 (329)
T COG3660 161 RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSP--GIVWNNEDTGYNPY 238 (329)
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCc--eeEeCCCCCCCCch
Confidence 55788999986655443 333333333322 466776655432 333333333111112 1111111 11112
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC
Q 007212 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
..+++.||.+|.+... =.-.-||.+.|+||.+--.
T Consensus 239 ~~~La~Adyii~TaDS---inM~sEAasTgkPv~~~~~ 273 (329)
T COG3660 239 IDMLAAADYIISTADS---INMCSEAASTGKPVFILEP 273 (329)
T ss_pred HHHHhhcceEEEecch---hhhhHHHhccCCCeEEEec
Confidence 3689999999987653 2336799999999976543
|
|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0036 Score=67.31 Aligned_cols=82 Identities=12% Similarity=0.193 Sum_probs=46.5
Q ss_pred CCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCc
Q 007212 227 GKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 227 ~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+.||+ ||.|.-..++++.++.... ++|.+++-|.+.-+. +..+++.+..+...++- ..
T Consensus 400 ~~Pdl-I~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLek~K-y~~s~~~w~e~e~~Yhf-------------s~ 457 (550)
T PF00862_consen 400 GKPDL-IIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLEKTK-YEDSDLYWKEIEEKYHF-------------SC 457 (550)
T ss_dssp S--SE-EEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-HHHH-HHTTTTTSHHHHHHH-H-------------HH
T ss_pred CCCcE-EEeccCcchHHHHHHHhhc-------CCceehhhhcccccc-ccccCCCHHHHHhhccc-------------hh
Confidence 46996 9999877888888888774 999999999774321 11111111111111100 12
Q ss_pred hhHHHHHHHhhCCEEEecCHHHHH
Q 007212 307 KINWMKAGILESDMVLTVSPHYAQ 330 (612)
Q Consensus 307 ~~~~~k~~l~~ad~vi~vS~~~~~ 330 (612)
.+.....+++.||.|||-+.....
T Consensus 458 qftAd~iamn~adfIItST~QEI~ 481 (550)
T PF00862_consen 458 QFTADLIAMNAADFIITSTYQEIA 481 (550)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHH
T ss_pred hhhHHHHHhhcCCEEEEcchHhhc
Confidence 344456688999999998765443
|
4.1.13 from EC in the following reaction: |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.18 Score=53.28 Aligned_cols=90 Identities=19% Similarity=0.106 Sum_probs=58.8
Q ss_pred cEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.+.++.|.-. -.+-+..+++++.++.+...++++.|... . +.+++...+.. .+.+. . ....+++.||+.
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~-~~i~~~~~~~~-~~~~~----~-~~~~~m~~aDla 239 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--G-KDLKEIYGDIS-EFEIS----Y-DTHKALLEAEFA 239 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--H-HHHHHHHhcCC-CcEEe----c-cHHHHHHhhhHH
Confidence 3445555532 23566778899999876557788877654 2 34444333222 22222 1 234689999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
+..| |.+.+|++.+|+|.|+.
T Consensus 240 l~~S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 240 FICS-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred HhcC-----cHHHHHHHHhCCCEEEE
Confidence 8665 78888999999999874
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.02 Score=53.96 Aligned_cols=41 Identities=12% Similarity=0.253 Sum_probs=31.7
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCc
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW 363 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~ 363 (612)
-..+..||..++.|.+.++.+-.. + ..+|.||+-|||++.+
T Consensus 130 l~~l~~~D~~isPT~wQ~~~fP~~----------~-r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 130 LLALEQADAGISPTRWQRSQFPAE----------F-RSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHhCCcCcCCCHHHHHhCCHH----------H-HcCcEEeecccchhhc
Confidence 335678999999999988876541 1 1399999999998754
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.32 Score=56.10 Aligned_cols=264 Identities=19% Similarity=0.223 Sum_probs=160.0
Q ss_pred CcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchh
Q 007212 229 KNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 308 (612)
Q Consensus 229 pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (612)
.| ++..||+|..++|-+++... .++++-+..|...+.- ..+..+- ..
T Consensus 141 ~d-~vwihdyhlmllp~~lr~~~------~~~~ig~flhspfpss----Ei~r~lp----------------------~r 187 (732)
T KOG1050|consen 141 GD-IVWIHDYHLMLLPQMLRERF------NSAKIGFFLHSPFPSS----EIYRCLP----------------------VR 187 (732)
T ss_pred CC-cEEEEcchhhccchhhhccc------ccceEEEeccCCCChH----HHHHhcc----------------------cH
Confidence 37 58999999999998888764 4777778888432211 0011110 11
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCc--CCCccch---------hhhhccCeEEeeCCccCCCcCCCcccccccccCc
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELD---------NIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 377 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~G~~~~---------~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~ 377 (612)
.-+-.++..+|.+-..+..++..+.+.. ..|.+.. ..-+...+..+|-|+|+..+.-....
T Consensus 188 ~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~-------- 259 (732)
T KOG1050|consen 188 KEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLEL-------- 259 (732)
T ss_pred HHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccc--------
Confidence 1123345566666666666665544311 0111111 00122356778888888776433210
Q ss_pred chhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCC----hh---
Q 007212 378 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KP--- 444 (612)
Q Consensus 378 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~----~~--- 444 (612)
.....-..+++..+ .++.+|+-+-|++.-||+..=+.|+.++.+ ..+.++.+..+. ++
T Consensus 260 ----~~~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~ 330 (732)
T KOG1050|consen 260 ----PYVGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEE 330 (732)
T ss_pred ----hhHHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHH
Confidence 00001122333333 255789999999999999888888887765 245555554432 22
Q ss_pred HHHHHHHHHHH----CCC----ceE-EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcC----CceEEcCCCC
Q 007212 445 MEKQLEQLEIL----YPE----KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG----TVPIVASTGG 511 (612)
Q Consensus 445 ~~~~l~~l~~~----~~~----~v~-~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G----~PvI~s~~gg 511 (612)
+...+..+..+ +.. .+. ..-.++..++-+.+.-+|+.++.+..+|..++.+|+..|. .+.|.+..-|
T Consensus 331 ~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G 410 (732)
T KOG1050|consen 331 LKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIG 410 (732)
T ss_pred HHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeecc
Confidence 23333333322 221 121 2223356666689999999999999999999999999873 6678888777
Q ss_pred cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007212 512 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 512 ~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
-.++.+++. . ++.|-|.++++..|..+++.+
T Consensus 411 ~~~tl~d~a---i---------vvnpw~~~~~~~~i~~al~~s 441 (732)
T KOG1050|consen 411 DDTTLEDAA---I---------VVNPWDGDEFAILISKALTMS 441 (732)
T ss_pred ccccccccC---E---------EECCcchHHHHHHHHHHhhcC
Confidence 777775543 2 248999999999999999984
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.36 E-value=4.3 Score=42.41 Aligned_cols=136 Identities=13% Similarity=0.221 Sum_probs=74.2
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhccc-CCe---EEEEEecCC-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK-ENV---QIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~---~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 477 (612)
..+++.+|. -+-|-+.+..++..... +++ -++|.|.-- ....+++...+.+.| ++.. ..|..+. .+++++
T Consensus 220 ~~Ilvs~GG--G~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p-~i~I-~~f~~~~-~~ll~g 294 (400)
T COG4671 220 FDILVSVGG--GADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRP-HISI-FEFRNDF-ESLLAG 294 (400)
T ss_pred ceEEEecCC--ChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCC-CeEE-EEhhhhH-HHHHHh
Confidence 357777774 34454444444443322 333 355666532 334455555555444 3543 3444433 369999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc-c-ceec---CcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-D-TVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e-~v~~---g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
|+..|.-.-+ ++..|-++.|+|.+.-....-. | ++.. ..-|+. |..+-+.-.++.|+++|..++.
T Consensus 295 A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~------dvL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 295 ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLV------DVLLPENLTPQNLADALKAALA 364 (400)
T ss_pred hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcc------eeeCcccCChHHHHHHHHhccc
Confidence 9999965543 5688999999998655432222 2 2221 122321 0001133457889999988887
Q ss_pred h
Q 007212 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
-
T Consensus 365 ~ 365 (400)
T COG4671 365 R 365 (400)
T ss_pred C
Confidence 4
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.96 E-value=1.4 Score=44.40 Aligned_cols=88 Identities=16% Similarity=0.277 Sum_probs=56.4
Q ss_pred EEEEEccCccccCHHHHHHHHHhcccCCeEEE-EEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
+++..|.-+ .|+ +..+.++.|.+.++.+. ++|.+.+.+.+ +.+....++ ++..+ .+.+.+..++..||..+.
T Consensus 161 ilI~lGGsD-pk~--lt~kvl~~L~~~~~nl~iV~gs~~p~l~~-l~k~~~~~~-~i~~~--~~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGGSD-PKN--LTLKVLAELEQKNVNLHIVVGSSNPTLKN-LRKRAEKYP-NINLY--IDTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccCCC-hhh--hHHHHHHHhhccCeeEEEEecCCCcchhH-HHHHHhhCC-CeeeE--ecchhHHHHHHhcchhee
Confidence 566666544 344 55667777765454444 34655554444 444555555 34433 345666789999999985
Q ss_pred cCCCCCCcHHHHHHHHcCCce
Q 007212 484 PSRFEPCGLIQLHAMRYGTVP 504 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~Pv 504 (612)
. -|.++.||...|+|.
T Consensus 234 A-----aGstlyEa~~lgvP~ 249 (318)
T COG3980 234 A-----AGSTLYEALLLGVPS 249 (318)
T ss_pred c-----cchHHHHHHHhcCCc
Confidence 3 589999999999994
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.52 Score=49.09 Aligned_cols=104 Identities=16% Similarity=0.060 Sum_probs=67.9
Q ss_pred cEEEEEccCcccc--CHH---HHHHHHHhccc-CCeEEEEEecC--ChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007212 404 PVIGFIGRLEEQK--GSD---ILAAAIPHFIK-ENVQIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 404 ~~i~~iGrl~~~K--g~d---~li~A~~~l~~-~~~~lvivG~g--~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 475 (612)
.+.+.+|.=.... +.+ .+++.+..+.+ .+.++.|..+. +++.++.+.++....+ .+.++..-...-...++
T Consensus 148 ~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~-~~~~~~~~~~nPy~~~L 226 (311)
T PF06258_consen 148 RVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNP-GVYIWDGTGENPYLGFL 226 (311)
T ss_pred eEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCC-ceEEecCCCCCcHHHHH
Confidence 4667788643322 333 56666666554 46788887763 3567777777765444 34333222222244799
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC
Q 007212 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 511 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg 511 (612)
+.||.++++.. .-.-+-||.+.|+||.+-...+
T Consensus 227 a~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 227 AAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 99999999876 3345899999999999888765
|
The function of this family is unknown. |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=94.68 E-value=5.5 Score=40.17 Aligned_cols=137 Identities=14% Similarity=0.147 Sum_probs=75.0
Q ss_pred EEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCC-hhHHHHHHH--------------HHHHCCCceEEEeccChHH
Q 007212 407 GFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGK-KPMEKQLEQ--------------LEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 407 ~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~-~~~~~~l~~--------------l~~~~~~~v~~~~~~~~~~ 470 (612)
.|+||....||+..+++.-++..+ ++..-++-|-.. ......++. ....-..-+..++.+-.++
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E 266 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSE 266 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHH
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCccccccCcccCCCCcceecchhhhHH
Confidence 899999999999999999988766 678888877422 111111111 1111112355566676666
Q ss_pred HHHHHHhccEEEEcCCC------CCCcHHHHHHHHcCCceEEc-CCCCccc-------ceecCcceEEecccccccccCC
Q 007212 471 AHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVA-STGGLVD-------TVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~------E~~gl~~lEAma~G~PvI~s-~~gg~~e-------~v~~g~~G~~~~~~~~~~~~v~ 536 (612)
.-..++.+-+...-+.. +.+-.+.+|..|||+.+|-- ++|.... .+.+....+. +|
T Consensus 267 ~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~----------~D 336 (355)
T PF11440_consen 267 GLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIY----------FD 336 (355)
T ss_dssp HHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EE----------E-
T ss_pred HHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcceeE----------ec
Confidence 66788888888777652 45778999999999977755 3444333 2222222333 38
Q ss_pred CCCHHHHHHHHHHHHHh
Q 007212 537 PVDVAAVSTTVRRALAT 553 (612)
Q Consensus 537 ~~d~~~la~~i~~ll~~ 553 (612)
..|.++-.+.|.++.++
T Consensus 337 e~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 337 ENDLESTVEKLIEVANN 353 (355)
T ss_dssp TTSHHHHHHHHHHHHT-
T ss_pred cchHHHHHHHHHHHhcc
Confidence 88888877777776554
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.057 Score=55.00 Aligned_cols=43 Identities=16% Similarity=0.317 Sum_probs=35.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
|+|++|+...+|+ ..||++.-+.+|.+.|-+.-..|..++++.
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~~ 43 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGANP 43 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCCc
Confidence 8999999999995 789999999999998877656666666663
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.96 Score=47.46 Aligned_cols=112 Identities=18% Similarity=0.166 Sum_probs=70.3
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcc-CccccCH--HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceE-EE
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGR-LEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR-GV 463 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGr-l~~~Kg~--d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~-~~ 463 (612)
.+.+..+++++.+ +..+++..|. ..+.|.+ +...+.+..+.+.+.+++++|+.. ..+..+++....+..+. ..
T Consensus 161 ~~~~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~--e~~~~~~i~~~~~~~~~~l~ 237 (334)
T TIGR02195 161 QAAALAKFGLDTE-RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAK--DHPAGNEIEALLPGELRNLA 237 (334)
T ss_pred HHHHHHHcCCCCC-CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChh--hHHHHHHHHHhCCcccccCC
Confidence 3445566666532 2245556665 3466654 477777777766678999999754 23334455444443332 33
Q ss_pred eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
+..+-.++..+++.||++|-.-. ..+-=|.|.|+|+|+-
T Consensus 238 g~~sL~el~ali~~a~l~I~~DS-----Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 238 GETSLDEAVDLIALAKAVVTNDS-----GLMHVAAALNRPLVAL 276 (334)
T ss_pred CCCCHHHHHHHHHhCCEEEeeCC-----HHHHHHHHcCCCEEEE
Confidence 45566777789999999996553 3344478999999864
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.28 Score=41.67 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=58.4
Q ss_pred EEEEecCChhHHHHHHHHHHHCCCceEEE---eccChHH--HHHHHHhccEEEEcCCC---CCCcHHHHHHHHcCCceEE
Q 007212 435 IIVLGTGKKPMEKQLEQLEILYPEKARGV---AKFNIPL--AHMIIAGADFILIPSRF---EPCGLIQLHAMRYGTVPIV 506 (612)
Q Consensus 435 lvivG~g~~~~~~~l~~l~~~~~~~v~~~---~~~~~~~--~~~i~~~aDv~v~pS~~---E~~gl~~lEAma~G~PvI~ 506 (612)
++|+|. .+.+...++++..+++.++..+ .++.... ++..+..||++|++..+ ..+-.+--+|-..|+|++.
T Consensus 2 vliVGG-~~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGG-REDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcC-CcccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 467775 1226777888888888777777 5555554 77889999999999876 3455567778899999999
Q ss_pred cCCCCcccc
Q 007212 507 ASTGGLVDT 515 (612)
Q Consensus 507 s~~gg~~e~ 515 (612)
+...|...+
T Consensus 81 ~~~~~~~~l 89 (97)
T PF10087_consen 81 SRSRGVSSL 89 (97)
T ss_pred ECCCCHHHH
Confidence 986665543
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=92.62 E-value=2.3 Score=46.96 Aligned_cols=134 Identities=13% Similarity=0.059 Sum_probs=74.4
Q ss_pred CcEEEEEccCcc--ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 403 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~i~~iGrl~~--~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
..+++..|.... ..-+..++++++. .+..++++..++. ..+.+. .+++.....+.+.. .++++.++
T Consensus 275 ~vvyvsfGs~~~~~~~~~~~~~~~l~~---~~~~~lw~~~~~~---~~~~~~---~~~~~~v~~w~pQ~---~iL~h~~v 342 (459)
T PLN02448 275 SVLYVSLGSFLSVSSAQMDEIAAGLRD---SGVRFLWVARGEA---SRLKEI---CGDMGLVVPWCDQL---KVLCHSSV 342 (459)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHh---CCCCEEEEEcCch---hhHhHh---ccCCEEEeccCCHH---HHhccCcc
Confidence 357777887642 2224455555554 4778887665431 112121 22334444433433 37888887
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecC-cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
..+-+. +=-++++||+.+|+|+|+-...+ ....+.+. +.|+-+... .+ .-...+.+++++++++++.+
T Consensus 343 ~~fvtH--gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~-~~--~~~~~~~~~l~~av~~vl~~ 415 (459)
T PLN02448 343 GGFWTH--CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKRE-VG--EETLVGREEIAELVKRFMDL 415 (459)
T ss_pred ceEEec--CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecc-cc--cCCcCcHHHHHHHHHHHhcC
Confidence 443343 22357999999999999876533 33344332 345543100 00 00124779999999999975
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=92.47 E-value=2.6 Score=46.65 Aligned_cols=170 Identities=12% Similarity=0.056 Sum_probs=88.2
Q ss_pred CcEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEEecCCh--------hHHHHHHHHHHHCCCceEEEeccChHHHH
Q 007212 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKK--------PMEKQLEQLEILYPEKARGVAKFNIPLAH 472 (612)
Q Consensus 403 ~~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvivG~g~~--------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 472 (612)
..+++..|.+. ...-+..|+.++... ...|+++=..+. .+-+.+.+-... ..+....+.++.
T Consensus 279 sVvyvsfGS~~~l~~~q~~ela~gl~~s---~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~--rG~vv~~W~PQ~--- 350 (472)
T PLN02670 279 SVVYVALGTEASLRREEVTELALGLEKS---ETPFFWVLRNEPGTTQNALEMLPDGFEERVKG--RGMIHVGWVPQV--- 350 (472)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCcccccchhhcCChHHHHhccC--CCeEEeCcCCHH---
Confidence 46777788875 344555555666555 335555433210 011111111111 113323343443
Q ss_pred HHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCC----CCcccceecCcceEEecccccccccCCCCCHHHHHHHH
Q 007212 473 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVAST----GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~----gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i 547 (612)
.++++..+..+-+. || ++++||+++|+|+|+... ......+.+-+.|..+.....+ ..-+.+++.++|
T Consensus 351 ~IL~H~~v~~FvtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~----~~~~~e~i~~av 423 (472)
T PLN02670 351 KILSHESVGGFLTH---CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD----GSFTSDSVAESV 423 (472)
T ss_pred HHhcCcccceeeec---CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC----CcCcHHHHHHHH
Confidence 37888777554454 54 479999999999998764 3334444445677754110000 113689999999
Q ss_pred HHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHH
Q 007212 548 RRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 548 ~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l 587 (612)
++++.+..-+.+++.+++. +...=+-+..++.+++.+.+.
T Consensus 424 ~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 424 RLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 9999763112333222221 233344455555555555443
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=92.46 E-value=2 Score=47.15 Aligned_cols=128 Identities=10% Similarity=0.027 Sum_probs=75.8
Q ss_pred cEEEEEccCc---cccCHHHHHHHHHhcccCCeEEEE-EecCCh-hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 404 PVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 404 ~~i~~iGrl~---~~Kg~d~li~A~~~l~~~~~~lvi-vG~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
.+++..|... +.+-+..++.+++++ ..+|++ +..+.. .+.+.+. ...++++....+.+... ++++.
T Consensus 275 vvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~~~~---~~~~~~~~v~~w~PQ~~---iL~h~ 345 (448)
T PLN02562 275 VIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPPGYV---ERVSKQGKVVSWAPQLE---VLKHQ 345 (448)
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCHHHH---HHhccCEEEEecCCHHH---HhCCC
Confidence 5777888864 444566666666665 446554 332211 1211111 12234455444444443 78887
Q ss_pred cEEEEcCCCCCCc-HHHHHHHHcCCceEEcCC----CCcccceec-CcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCG-LIQLHAMRYGTVPIVAST----GGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 479 Dv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~----gg~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
++..+-+. || ++.+||+.+|+|+|+... ......+.+ -..|+.+ ...+.++++++|++++.
T Consensus 346 ~v~~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~----------~~~~~~~l~~~v~~~l~ 412 (448)
T PLN02562 346 AVGCYLTH---CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----------SGFGQKEVEEGLRKVME 412 (448)
T ss_pred ccceEEec---CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe----------CCCCHHHHHHHHHHHhC
Confidence 76554454 44 479999999999998754 333444433 2456643 34578999999999997
Q ss_pred h
Q 007212 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
+
T Consensus 413 ~ 413 (448)
T PLN02562 413 D 413 (448)
T ss_pred C
Confidence 6
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=92.05 E-value=0.61 Score=43.40 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=24.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+++.+++ .|--......|+..+ -|+++++|-.
T Consensus 1 M~ILlle~y~-----ggSHk~~~~~L~~~~---~~~~~lltLP 35 (168)
T PF12038_consen 1 MRILLLEPYY-----GGSHKQWADGLAAHS---EHEWTLLTLP 35 (168)
T ss_pred CeEEEEcccc-----ccCHHHHHHHHHHhc---cCCEEEEEcC
Confidence 9999999875 344454555555554 4899999853
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=91.97 E-value=0.8 Score=43.09 Aligned_cols=27 Identities=19% Similarity=0.292 Sum_probs=23.4
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchh
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDN 344 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~ 344 (612)
-..+|..++.|+..++++.+ .|++.++
T Consensus 135 ~~~~D~y~Vase~~~~~l~~---~Gi~~~~ 161 (169)
T PF06925_consen 135 HPGVDRYFVASEEVKEELIE---RGIPPER 161 (169)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChhH
Confidence 34789999999999999997 8998773
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=90.56 E-value=2.3 Score=42.33 Aligned_cols=102 Identities=14% Similarity=0.035 Sum_probs=61.8
Q ss_pred CCcEEEEEccCccccCHH--HHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCC-ceEEEeccChHHHHHHHHhc
Q 007212 402 NIPVIGFIGRLEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d--~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~~~~~~~~~~~i~~~a 478 (612)
+..+++..|.-.+.|.+. ...+.+..+.+...+++++|.+.+..++..+++....+. .+...+..+-.++..+++.|
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a 184 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRA 184 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTS
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcC
Confidence 345677777767777654 488888888766688999998764334455555544432 34455556777777899999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
|++|-+-. ..+-=|.+.|+|+|+-=
T Consensus 185 ~~~I~~Dt-----g~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 185 DLVIGNDT-----GPMHLAAALGTPTVALF 209 (247)
T ss_dssp SEEEEESS-----HHHHHHHHTT--EEEEE
T ss_pred CEEEecCC-----hHHHHHHHHhCCEEEEe
Confidence 99997654 33444889999998763
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=90.32 E-value=1.9 Score=44.00 Aligned_cols=98 Identities=17% Similarity=0.224 Sum_probs=64.0
Q ss_pred EEEEEccCcccc--CHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccE
Q 007212 405 VIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~i~~iGrl~~~K--g~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
+++..|.-.+.| ..+...+.++.+.+.+++++++|..+ .++..+++.... +..+...+..+-.++..+++.||+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 455565555555 45788888888876689999998755 334445554443 122333444455677789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCC
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+|-+.. |..-+ |.+.|+|+|+--.
T Consensus 202 ~I~~Ds----g~~Hl-A~a~~~p~i~l~g 225 (279)
T cd03789 202 VVTNDS----GPMHL-AAALGTPTVALFG 225 (279)
T ss_pred EEeeCC----HHHHH-HHHcCCCEEEEEC
Confidence 997653 44444 5699999987643
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=90.15 E-value=3.7 Score=43.44 Aligned_cols=101 Identities=13% Similarity=-0.014 Sum_probs=64.6
Q ss_pred CcEEEEEccCccccC--HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc
Q 007212 403 IPVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg--~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~a 478 (612)
..+++..|.-.+.|. .+...+.++.|.+.+.+++++|...+...+..+++..... ..+...+..+-.++..+++.|
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a 263 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDHA 263 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHhC
Confidence 356677777666775 4467777777766688999987644222233344443321 123334555667777899999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
|++|-.-. | .+-=|-|.|+|+|+--
T Consensus 264 ~l~v~nDS----G-p~HlAaA~g~P~v~lf 288 (352)
T PRK10422 264 QLFIGVDS----A-PAHIAAAVNTPLICLF 288 (352)
T ss_pred CEEEecCC----H-HHHHHHHcCCCEEEEE
Confidence 99996543 3 3344779999998653
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=89.75 E-value=0.081 Score=49.57 Aligned_cols=91 Identities=14% Similarity=0.187 Sum_probs=51.5
Q ss_pred ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccceecCcceEEeccccc
Q 007212 459 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSV 530 (612)
Q Consensus 459 ~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~~~~~~~~ 530 (612)
++..+...+ .+..+++.||++|.-. =+.++.|++++|+|.|+-...+ ....+.+...|..+
T Consensus 56 ~v~~~~~~~--~m~~~m~~aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~----- 124 (167)
T PF04101_consen 56 NVKVFGFVD--NMAELMAAADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML----- 124 (167)
T ss_dssp CCEEECSSS--SHHHHHHHHSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS-----
T ss_pred cEEEEechh--hHHHHHHHcCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc-----
Confidence 455444432 2557999999988422 2478999999999998766554 12223333334432
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHH
Q 007212 531 DCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 565 (612)
Q Consensus 531 ~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~ 565 (612)
.-...+.+.|.++|..++++ +....++..+
T Consensus 125 ---~~~~~~~~~L~~~i~~l~~~--~~~~~~~~~~ 154 (167)
T PF04101_consen 125 ---DESELNPEELAEAIEELLSD--PEKLKEMAKA 154 (167)
T ss_dssp ---ECCC-SCCCHHHHHHCHCCC--HH-SHHHCCC
T ss_pred ---CcccCCHHHHHHHHHHHHcC--cHHHHHHHHH
Confidence 01223467899999998887 4444444433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=89.11 E-value=6.4 Score=41.45 Aligned_cols=99 Identities=12% Similarity=0.045 Sum_probs=63.2
Q ss_pred cEEEEEccCccccC--HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCC-Cce-EEEeccChHHHHHHHHhcc
Q 007212 404 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKA-RGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg--~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v-~~~~~~~~~~~~~i~~~aD 479 (612)
.+++..|.-.+.|. .+...+.+..+.+.+.+++++|...+...+..+++....+ .++ ...+..+-.++..+++.||
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~ 262 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHAR 262 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCC
Confidence 45566666556664 4567777777755678999998654222233444443332 123 2445556677778999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
++|-.-. ..+-=|.|.|+|+|+-
T Consensus 263 l~Vs~DS-----Gp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 263 LFIGVDS-----VPMHMAAALGTPLVAL 285 (344)
T ss_pred EEEecCC-----HHHHHHHHcCCCEEEE
Confidence 9996643 3344488999999875
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=88.90 E-value=11 Score=39.17 Aligned_cols=98 Identities=12% Similarity=0.106 Sum_probs=64.0
Q ss_pred cEEEEEccCccccCH--HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~--d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.++++.|.=.+.|.+ +...+.+..+.+.+.+++++|.++. ..+..+++....+. ....+..+-.++..+++.||++
T Consensus 181 ~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e~~~~~~i~~~~~~-~~l~g~~sL~el~ali~~a~l~ 258 (319)
T TIGR02193 181 YAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-EKQRAERIAEALPG-AVVLPKMSLAEVAALLAGADAV 258 (319)
T ss_pred EEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHhhCCC-CeecCCCCHHHHHHHHHcCCEE
Confidence 466677765567765 5777777777656788888854442 22334455544443 2344556667777899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
|-.-. ..+-=|-+.|+|+|+-=
T Consensus 259 I~~DS-----gp~HlAaa~g~P~i~lf 280 (319)
T TIGR02193 259 VGVDT-----GLTHLAAALDKPTVTLY 280 (319)
T ss_pred EeCCC-----hHHHHHHHcCCCEEEEE
Confidence 96553 23334778999998653
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=88.79 E-value=6.4 Score=43.29 Aligned_cols=134 Identities=16% Similarity=0.090 Sum_probs=72.2
Q ss_pred CcEEEEEccCcc--ccCHHHHHHHHHhcccCCeEEEEEec-C----ChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007212 403 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGT-G----KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 403 ~~~i~~iGrl~~--~Kg~d~li~A~~~l~~~~~~lvivG~-g----~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 475 (612)
..+++..|.+.. .+-+..+..+++.. ...|+++=. + .......-....++.+++.....+.+... ++
T Consensus 265 sVvyvsfGS~~~~~~~q~~ela~gLe~s---~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~---iL 338 (451)
T PLN02410 265 SVIFVSLGSLALMEINEVMETASGLDSS---NQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKE---VL 338 (451)
T ss_pred cEEEEEccccccCCHHHHHHHHHHHHhc---CCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHH---Hh
Confidence 467777888752 33344444444443 335554422 1 11000001111222233444444444443 78
Q ss_pred HhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecC-cceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 476 AGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
++.++..+-+. || ++++||+++|+|+|+.... .....+.+. +.|+.+. ..-+.++++++|++
T Consensus 339 ~h~~v~~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~---------~~~~~~~v~~av~~ 406 (451)
T PLN02410 339 SHPAVGGFWSH---CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE---------GDLDRGAVERAVKR 406 (451)
T ss_pred CCCccCeeeec---CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC---------CcccHHHHHHHHHH
Confidence 88666433343 44 4799999999999987542 333444333 4676541 23477899999999
Q ss_pred HHHhh
Q 007212 550 ALATY 554 (612)
Q Consensus 550 ll~~~ 554 (612)
++.+.
T Consensus 407 lm~~~ 411 (451)
T PLN02410 407 LMVEE 411 (451)
T ss_pred HHcCC
Confidence 99763
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=88.16 E-value=2.2 Score=47.50 Aligned_cols=126 Identities=17% Similarity=0.135 Sum_probs=71.4
Q ss_pred CCcEEEEEccCcc---ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 402 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~i~~iGrl~~---~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
+..+++..|.+.. .+-.+.+++|++++ +. ++++.-++... .. .+.++....+.++. ++++..
T Consensus 276 ~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~--~~-~~iW~~~~~~~-----~~----l~~n~~~~~W~PQ~---~lL~hp 340 (500)
T PF00201_consen 276 KGVVYVSFGSIVSSMPEEKLKEIAEAFENL--PQ-RFIWKYEGEPP-----EN----LPKNVLIVKWLPQN---DLLAHP 340 (500)
T ss_dssp TEEEEEE-TSSSTT-HHHHHHHHHHHHHCS--TT-EEEEEETCSHG-----CH----HHTTEEEESS--HH---HHHTST
T ss_pred CCEEEEecCcccchhHHHHHHHHHHHHhhC--CC-ccccccccccc-----cc----ccceEEEeccccch---hhhhcc
Confidence 3467777888752 22245567777766 33 77776655311 11 22346555555544 478776
Q ss_pred cEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 479 DFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 479 Dv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
.+-++=+. +| .+++||+.+|+|+|+-..- .....+.+-+.|.... ...-+.+++.++|++++++
T Consensus 341 ~v~~fitH---gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~--------~~~~~~~~l~~ai~~vl~~ 409 (500)
T PF00201_consen 341 RVKLFITH---GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLD--------KNDLTEEELRAAIREVLEN 409 (500)
T ss_dssp TEEEEEES-----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEG--------GGC-SHHHHHHHHHHHHHS
T ss_pred cceeeeec---cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEE--------ecCCcHHHHHHHHHHHHhh
Confidence 66544444 44 4799999999999997642 2333444445676541 1223568999999999998
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=87.94 E-value=11 Score=39.75 Aligned_cols=98 Identities=20% Similarity=0.204 Sum_probs=69.7
Q ss_pred cEEEEEc-cCccccCH--HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 404 PVIGFIG-RLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 404 ~~i~~iG-rl~~~Kg~--d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
.+++..| .-...|.+ +...+.+..+.+...++++.|.. +.++..+++...+++.+...+.-+-.++..+++.||+
T Consensus 177 ~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~--~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 177 YIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP--DEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred eEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh--HHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 4566677 55566654 47777777777767899999977 3666777787777643334555566777789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+|-+.. |.. -=|-|.|+|+|+--
T Consensus 255 ~I~~DS----g~~-HlAaA~~~P~I~iy 277 (334)
T COG0859 255 VIGNDS----GPM-HLAAALGTPTIALY 277 (334)
T ss_pred EEccCC----hHH-HHHHHcCCCEEEEE
Confidence 996654 333 33889999998764
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=87.78 E-value=7.1 Score=42.96 Aligned_cols=137 Identities=12% Similarity=0.000 Sum_probs=76.8
Q ss_pred CcEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEEecCCh-------hHHHHH-HHHHHHC-CCceEEEeccChHHH
Q 007212 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKK-------PMEKQL-EQLEILY-PEKARGVAKFNIPLA 471 (612)
Q Consensus 403 ~~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvivG~g~~-------~~~~~l-~~l~~~~-~~~v~~~~~~~~~~~ 471 (612)
..+++..|.+. +.+-+..|..+++.. ...|+++=..+. .....+ +...++. +.++....+.++..
T Consensus 271 sVvyvsfGS~~~~~~~q~~ela~gL~~s---~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~- 346 (451)
T PLN03004 271 SVVFLCFGSLGLFSKEQVIEIAVGLEKS---GQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVP- 346 (451)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHH-
Confidence 36777788873 344555666666655 335555443221 011101 0111111 12354444555543
Q ss_pred HHHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCC----CCccccee-cCcceEEecccccccccCCCCCHHHHHH
Q 007212 472 HMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVAST----GGLVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~----gg~~e~v~-~g~~G~~~~~~~~~~~~v~~~d~~~la~ 545 (612)
+++++++..+-+. || ++++||+++|+|+|+... ......+. +-+.|..+... + -..-+.+++++
T Consensus 347 --iL~H~~v~~FvTH---~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~--~---~~~~~~e~l~~ 416 (451)
T PLN03004 347 --VLNHKAVGGFVTH---CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES--E---TGFVSSTEVEK 416 (451)
T ss_pred --HhCCCccceEecc---CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC--c---CCccCHHHHHH
Confidence 7999998555454 44 479999999999998754 33444443 33567654100 0 00237789999
Q ss_pred HHHHHHHh
Q 007212 546 TVRRALAT 553 (612)
Q Consensus 546 ~i~~ll~~ 553 (612)
+|++++.+
T Consensus 417 av~~vm~~ 424 (451)
T PLN03004 417 RVQEIIGE 424 (451)
T ss_pred HHHHHhcC
Confidence 99999975
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=87.73 E-value=22 Score=36.56 Aligned_cols=100 Identities=14% Similarity=0.002 Sum_probs=58.9
Q ss_pred cEEEEEccCc---cccCHHHHHHHHHhcccC-CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 404 PVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~i~~iGrl~---~~Kg~d~li~A~~~l~~~-~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
+.|++.-|-. .....+.+.+++..+.+. +.+++++.-....-.+..+++....+.........+.++.-.+++.||
T Consensus 173 ~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~ 252 (298)
T TIGR03609 173 PVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASAR 252 (298)
T ss_pred CeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCC
Confidence 4555544431 223466778888887653 777766553222223444555555433222233445666667999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
++|-... =..+=|+.+|+|+|+-+
T Consensus 253 ~vI~~Rl-----H~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 253 LVIGMRL-----HALILAAAAGVPFVALS 276 (298)
T ss_pred EEEEech-----HHHHHHHHcCCCEEEee
Confidence 7774443 24566999999999664
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=87.51 E-value=9.1 Score=42.19 Aligned_cols=138 Identities=11% Similarity=0.091 Sum_probs=74.1
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEE-ecCC-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lviv-G~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
..+++..|.+... ..+.+-+.+..|...+.+|+++ +... ......+.+... +++.... .+-++. .+++++++
T Consensus 270 svvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~--~~~g~v~-~w~PQ~--~iL~h~~v 343 (456)
T PLN02210 270 SVVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK--EGQGVVL-EWSPQE--KILSHMAI 343 (456)
T ss_pred ceEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc--CCCeEEE-ecCCHH--HHhcCcCc
Confidence 3677778887532 3344444444444446666653 3211 111112222211 1223223 343333 37888885
Q ss_pred EEEcCCCCCCcH-HHHHHHHcCCceEEcCCCC----cccceec-CcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 481 ILIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 481 ~v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
..+-+. ||. +++||+.+|+|+|+-...+ ....+.+ -+.|..+.....+ ..-+.++++++|++++.+
T Consensus 344 g~FitH---~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~----~~~~~~~l~~av~~~m~~ 415 (456)
T PLN02210 344 SCFVTH---CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVD----GELKVEEVERCIEAVTEG 415 (456)
T ss_pred CeEEee---CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccC----CcCCHHHHHHHHHHHhcC
Confidence 444444 443 7999999999999876432 3334444 3567654210000 124778999999999976
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=86.76 E-value=8.4 Score=42.79 Aligned_cols=137 Identities=15% Similarity=0.072 Sum_probs=72.1
Q ss_pred CcEEEEEccCcc--ccCHHHHHHHHHhcccCCeEEEE-EecCCh------hHHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007212 403 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIV-LGTGKK------PMEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 403 ~~~i~~iGrl~~--~Kg~d~li~A~~~l~~~~~~lvi-vG~g~~------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 473 (612)
..+++..|.... .+.+..++++++.+ +.+|++ ++.... .+.+.+.+.. .+.++....+.+.. .
T Consensus 286 svvyvsfGS~~~~~~~~~~~~~~~l~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~--~~~g~~v~~w~PQ~---~ 357 (482)
T PLN03007 286 SVIYLSFGSVASFKNEQLFEIAAGLEGS---GQNFIWVVRKNENQGEKEEWLPEGFEERT--KGKGLIIRGWAPQV---L 357 (482)
T ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHHC---CCCEEEEEecCCcccchhhcCCHHHHHHh--ccCCEEEecCCCHH---H
Confidence 367778888743 34444455554444 555554 342110 0111111111 13345544555554 4
Q ss_pred HHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CcceEEecccc---cccccCCCCCHHHHH
Q 007212 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFS---VDCEAVDPVDVAAVS 544 (612)
Q Consensus 474 i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~~~~~~~---~~~~~v~~~d~~~la 544 (612)
+++++++-.+-+. || ++++||+.+|+|+|+....+ ....+.+ -..|+-++... .+ -..-+.++++
T Consensus 358 iL~h~~v~~fvtH---~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~---~~~~~~~~l~ 431 (482)
T PLN03007 358 ILDHQATGGFVTH---CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVK---GDFISREKVE 431 (482)
T ss_pred HhccCccceeeec---CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccc---cCcccHHHHH
Confidence 7888887444444 33 47999999999999876432 2222221 12343221000 00 0124688999
Q ss_pred HHHHHHHHh
Q 007212 545 TTVRRALAT 553 (612)
Q Consensus 545 ~~i~~ll~~ 553 (612)
++|++++.+
T Consensus 432 ~av~~~m~~ 440 (482)
T PLN03007 432 KAVREVIVG 440 (482)
T ss_pred HHHHHHhcC
Confidence 999999976
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.34 E-value=19 Score=39.90 Aligned_cols=75 Identities=16% Similarity=0.028 Sum_probs=46.5
Q ss_pred HHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCC----CCcccce-ecCcceEEecccccccccCCCCCHHHHHHH
Q 007212 473 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVAST----GGLVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~----gg~~e~v-~~g~~G~~~~~~~~~~~~v~~~d~~~la~~ 546 (612)
.++++.++..+-+. || ++.+||+.+|+|+|+-.. ......+ +.-+.|+.+.....+ -..-+.++++++
T Consensus 351 ~iL~h~~vg~fvtH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~---~~~~~~e~l~~a 424 (480)
T PLN00164 351 EILAHAAVGGFVTH---CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKR---DNFVEAAELERA 424 (480)
T ss_pred HHhcCcccCeEEee---cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccccc---CCcCcHHHHHHH
Confidence 37888886544444 44 479999999999998754 2233333 333567654100000 011367999999
Q ss_pred HHHHHHh
Q 007212 547 VRRALAT 553 (612)
Q Consensus 547 i~~ll~~ 553 (612)
|++++.+
T Consensus 425 v~~vm~~ 431 (480)
T PLN00164 425 VRSLMGG 431 (480)
T ss_pred HHHHhcC
Confidence 9999975
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=86.23 E-value=7.3 Score=41.14 Aligned_cols=109 Identities=15% Similarity=0.095 Sum_probs=64.2
Q ss_pred HHHHhCCCCCCCCcEEEEEccC-ccccC--HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCC----c-eEE
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRL-EEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE----K-ARG 462 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl-~~~Kg--~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~----~-v~~ 462 (612)
+.+.+++..+ +..+.+..|.- .+.|. .+...+.++.+.+.+++++++|... .++..+++....+. + +..
T Consensus 170 ~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~--e~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T PRK10916 170 TCAAFSLSSE-RPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_pred HHHHcCCCCC-CCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH--hHHHHHHHHHhcccccccceeec
Confidence 4455554322 22455566653 35664 3456777776655678999998654 23333444333321 1 223
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
.+..+-.++..+++.||++|-.-. | .+-=|-|.|+|+|+-
T Consensus 247 ~g~~sL~el~ali~~a~l~I~nDT----G-p~HlAaA~g~P~val 286 (348)
T PRK10916 247 AGETQLEQAVILIAACKAIVTNDS----G-LMHVAAALNRPLVAL 286 (348)
T ss_pred cCCCCHHHHHHHHHhCCEEEecCC----h-HHHHHHHhCCCEEEE
Confidence 344466667789999999996543 2 334488999999864
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=85.62 E-value=11 Score=41.31 Aligned_cols=137 Identities=7% Similarity=0.052 Sum_probs=73.1
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
.+++..|.... -..+.+.+.+.-|...++-.++-.+....+.+.+.+.. .++++....+.++. .++++.++..+
T Consensus 266 vvyvsfGS~~~-~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~--~~~~~~i~~W~PQ~---~iL~H~~v~~F 339 (449)
T PLN02173 266 VVYIAFGSMAK-LSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETV--DKDKSLVLKWSPQL---QVLSNKAIGCF 339 (449)
T ss_pred eEEEEeccccc-CCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhh--cCCceEEeCCCCHH---HHhCCCccceE
Confidence 67777887642 23344555555553334322222111111111111111 13445555544443 37888886665
Q ss_pred cCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecC-cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 484 PSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
-+. || ++++||+++|+|+|+-..- -....+.+. +.|.-+.. .+.+ ..-+.++++++|++++.+
T Consensus 340 vtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~--~~~~--~~~~~e~v~~av~~vm~~ 408 (449)
T PLN02173 340 MTH---CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKA--EKES--GIAKREEIEFSIKEVMEG 408 (449)
T ss_pred Eec---CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEee--cccC--CcccHHHHHHHHHHHhcC
Confidence 555 44 5899999999999987643 233444442 45664310 0000 012679999999999976
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=85.25 E-value=13 Score=41.33 Aligned_cols=140 Identities=14% Similarity=0.013 Sum_probs=69.9
Q ss_pred CcEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEE-ecCChhH---HHHH-HHHHHHCCCceEEEeccChHHHHHHH
Q 007212 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPM---EKQL-EQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 403 ~~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lviv-G~g~~~~---~~~l-~~l~~~~~~~v~~~~~~~~~~~~~i~ 475 (612)
.++++..|.+. ..+-+..++.+++.. +.+|+++ +...... ...+ ....++..++.....+.+.. .++
T Consensus 281 svvyvsfGS~~~~~~~~~~ela~~l~~~---~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~---~iL 354 (475)
T PLN02167 281 SVVFLCFGSLGSLPAPQIKEIAQALELV---GCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQV---EIL 354 (475)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC---CCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHH---HHh
Confidence 36677778863 234456666666655 5566544 3211000 0000 01111111223333333333 378
Q ss_pred HhccEEEEcCCCCCCcH-HHHHHHHcCCceEEcCCCC----ccc-ceecCcceEEecccc-cccccCCCCCHHHHHHHHH
Q 007212 476 AGADFILIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LVD-TVEEGFTGFQMGSFS-VDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~e-~v~~g~~G~~~~~~~-~~~~~v~~~d~~~la~~i~ 548 (612)
++..+-.+-+. ||. +.+||+++|+|+|+-...+ ... .++.-+.|..+.... .+ --..-+.++++++|+
T Consensus 355 ~h~~vg~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~--~~~~~~~~~l~~av~ 429 (475)
T PLN02167 355 AHKAIGGFVSH---CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSA--YGEIVKADEIAGAVR 429 (475)
T ss_pred cCcccCeEEee---CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccc--cCCcccHHHHHHHHH
Confidence 77554332233 443 7999999999999876432 222 233334566541000 00 001136789999999
Q ss_pred HHHHh
Q 007212 549 RALAT 553 (612)
Q Consensus 549 ~ll~~ 553 (612)
+++.+
T Consensus 430 ~~m~~ 434 (475)
T PLN02167 430 SLMDG 434 (475)
T ss_pred HHhcC
Confidence 99965
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=85.17 E-value=12 Score=41.63 Aligned_cols=135 Identities=9% Similarity=-0.065 Sum_probs=68.9
Q ss_pred CcEEEEEccCcc--ccCHHHHHHHHHhcccCCeEEEEEecCCh-------hHHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007212 403 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKK-------PMEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 403 ~~~i~~iGrl~~--~Kg~d~li~A~~~l~~~~~~lvivG~g~~-------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 473 (612)
..+++..|.+.. .+-+..+++++... +..|+++-..+. .+-..+.+... +..+....+.+.. .
T Consensus 284 svVyvsfGS~~~~~~~~~~ela~gL~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~~--~~g~~v~~w~PQ~---~ 355 (477)
T PLN02863 284 KVVYVCFGSQVVLTKEQMEALASGLEKS---GVHFIWCVKEPVNEESDYSNIPSGFEDRVA--GRGLVIRGWAPQV---A 355 (477)
T ss_pred ceEEEEeeceecCCHHHHHHHHHHHHhC---CCcEEEEECCCcccccchhhCCHHHHHHhc--cCCEEecCCCCHH---H
Confidence 356777787642 23355555555554 556665543210 01111111111 2234434444443 3
Q ss_pred HHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC----Ccccceec-CcceEEecccccccccCCCCCHHHHHHHHH
Q 007212 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 474 i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~i~ 548 (612)
++++..+.++-+. +=-++.+||+++|+|+|+-... -....+.+ -+.|..+..-. + ..-+.+++.++|.
T Consensus 356 vL~h~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~-~----~~~~~~~v~~~v~ 428 (477)
T PLN02863 356 ILSHRAVGAFLTH--CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGA-D----TVPDSDELARVFM 428 (477)
T ss_pred HhcCCCcCeEEec--CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCC-C----CCcCHHHHHHHHH
Confidence 6776443333233 2234799999999999987643 23333333 25676541000 0 1126788889998
Q ss_pred HHHH
Q 007212 549 RALA 552 (612)
Q Consensus 549 ~ll~ 552 (612)
+++.
T Consensus 429 ~~m~ 432 (477)
T PLN02863 429 ESVS 432 (477)
T ss_pred HHhh
Confidence 8774
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=85.09 E-value=0.92 Score=43.90 Aligned_cols=39 Identities=31% Similarity=0.438 Sum_probs=29.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..-. .+.-+..|.++|.+.||+|+|++|...+
T Consensus 1 M~ILlTNDDGi-------~a~Gi~aL~~~L~~~g~~V~VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDGI-------DAPGIRALAKALSALGHDVVVVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS-T-------TSHHHHHHHHHHTTTSSEEEEEEESSST
T ss_pred CeEEEEcCCCC-------CCHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 99999998632 2334678999998889999999998664
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=84.40 E-value=24 Score=38.67 Aligned_cols=84 Identities=7% Similarity=0.015 Sum_probs=52.4
Q ss_pred eEEEeccChHHHHHHHHhccEEEEcCCCCCCcH-HHHHHHHcCCceEEcCCC----Ccccceec-CcceEEecccccccc
Q 007212 460 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGL-IQLHAMRYGTVPIVASTG----GLVDTVEE-GFTGFQMGSFSVDCE 533 (612)
Q Consensus 460 v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~g----g~~e~v~~-g~~G~~~~~~~~~~~ 533 (612)
+....+.++. +++++..+..+-+. ||. +++||+++|+|+|+-..- .....+.+ -+.|..+.... +
T Consensus 313 ~~v~~W~PQ~---~iL~H~~v~~FvtH---cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~-~-- 383 (442)
T PLN02208 313 VVWGGWVQQP---LILDHPSIGCFVNH---CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK-T-- 383 (442)
T ss_pred cEeeccCCHH---HHhcCCccCeEEcc---CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc-C--
Confidence 4433444444 37888887665565 555 799999999999987642 23333333 34566541000 0
Q ss_pred cCCCCCHHHHHHHHHHHHHhh
Q 007212 534 AVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 534 ~v~~~d~~~la~~i~~ll~~~ 554 (612)
..-+.+++.++|++++++.
T Consensus 384 --~~~~~~~l~~ai~~~m~~~ 402 (442)
T PLN02208 384 --GWFSKESLSNAIKSVMDKD 402 (442)
T ss_pred --CcCcHHHHHHHHHHHhcCC
Confidence 0137789999999999763
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=84.30 E-value=21 Score=39.54 Aligned_cols=139 Identities=11% Similarity=0.026 Sum_probs=72.7
Q ss_pred CcEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEEecCChh-HHHHH-HHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKP-MEKQL-EQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~-~~~~l-~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
..+++..|.+. ..+-+..++.++..+ +..|+++=..+.. ..+.+ +...++.+++.....+.++.+ ++++.
T Consensus 276 sVVyvSfGS~~~~~~~q~~ela~~l~~~---~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~---IL~H~ 349 (468)
T PLN02207 276 SVVFLCFGSMGRLRGPLVKEIAHGLELC---QYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVE---ILAHK 349 (468)
T ss_pred cEEEEEeccCcCCCHHHHHHHHHHHHHC---CCcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHH---Hhccc
Confidence 36777788764 234455666666655 4455554322100 00000 111122333444444444443 67777
Q ss_pred cEEEEcCCCCCCcH-HHHHHHHcCCceEEcCCCC----cccceec-CcceEEecc-cccccccCCCCCHHHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 479 Dv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~~~~~-~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
.+..+-+. ||. +.+||+.+|+|+|+-...+ ....+.+ -+.|.-++. ...+. -..-+.+++.++|++++
T Consensus 350 ~vg~FvTH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~--~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 350 AVGGFVSH---CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHS--DEIVNANEIETAIRCVM 424 (468)
T ss_pred ccceeeec---CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEeccccccc--CCcccHHHHHHHHHHHH
Confidence 76544444 444 7899999999999876432 3333222 345653310 00000 01236789999999999
Q ss_pred H
Q 007212 552 A 552 (612)
Q Consensus 552 ~ 552 (612)
.
T Consensus 425 ~ 425 (468)
T PLN02207 425 N 425 (468)
T ss_pred h
Confidence 6
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=83.97 E-value=18 Score=39.85 Aligned_cols=137 Identities=12% Similarity=0.083 Sum_probs=75.9
Q ss_pred CcEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEE-EecCC-------hhHH---HHHHHHHHHCCCceEEEeccChH
Q 007212 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIV-LGTGK-------KPME---KQLEQLEILYPEKARGVAKFNIP 469 (612)
Q Consensus 403 ~~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvi-vG~g~-------~~~~---~~l~~l~~~~~~~v~~~~~~~~~ 469 (612)
..+++..|.+. +.+-++.+..++..+. .+|++ +.... .... ...+...++.+++.....+.++.
T Consensus 262 sVvyvsfGS~~~l~~~q~~ela~gL~~s~---~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~ 338 (455)
T PLN02152 262 SVIYVSFGTMVELSKKQIEELARALIEGK---RPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQI 338 (455)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHcC---CCeEEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCCHH
Confidence 46777788865 4556677777777762 25554 33210 0000 00122222334444444444433
Q ss_pred HHHHHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecC-cceEEecccccccccCCCCCHHHH
Q 007212 470 LAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 470 ~~~~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~l 543 (612)
.++++.++..+-+. || ++++||+.+|+|+|+-... .....+.+. +.|+-+.. + .-+.-+.+++
T Consensus 339 ---~iL~h~~vg~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~---~--~~~~~~~e~l 407 (455)
T PLN02152 339 ---EVLRHRAVGCFVTH---CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRE---N--SEGLVERGEI 407 (455)
T ss_pred ---HHhCCcccceEEee---CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeec---C--cCCcCcHHHH
Confidence 37888887655555 33 4799999999999987642 233333331 23443210 0 0012367999
Q ss_pred HHHHHHHHHh
Q 007212 544 STTVRRALAT 553 (612)
Q Consensus 544 a~~i~~ll~~ 553 (612)
+++|++++++
T Consensus 408 ~~av~~vm~~ 417 (455)
T PLN02152 408 RRCLEAVMEE 417 (455)
T ss_pred HHHHHHHHhh
Confidence 9999999975
|
|
| >KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=82.80 E-value=24 Score=37.52 Aligned_cols=165 Identities=15% Similarity=0.159 Sum_probs=107.5
Q ss_pred EEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-----hhHHHHHHHHHHH-CCCceEEEeccC-----hHHHHH
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-----KPMEKQLEQLEIL-YPEKARGVAKFN-----IPLAHM 473 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-----~~~~~~l~~l~~~-~~~~v~~~~~~~-----~~~~~~ 473 (612)
.|=|.|..++.+-..+..+.+.+++++++.++|+-+.. .++.+++.+.... .|+.+.++..-. .+.+..
T Consensus 156 ~iP~ygsyte~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~a 235 (483)
T KOG0780|consen 156 RVPFYGSYTEADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARA 235 (483)
T ss_pred CCeeEecccccchHHHHHHHHHHHHhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHH
Confidence 45567788889999999999999999999999998742 3455556666554 367777766542 233334
Q ss_pred HHHhccE--EEEcCCC----CCCcHHHHHHHHcCCceEEcCCCCcccceecCc----ceEEecccccccccCCCCCHHHH
Q 007212 474 IIAGADF--ILIPSRF----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF----TGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 474 i~~~aDv--~v~pS~~----E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~----~G~~~~~~~~~~~~v~~~d~~~l 543 (612)
+-...|+ +|++-.. -|..++..+ +.++|||--.+|..-|-++.-. .+-+ .--+|++.|
T Consensus 236 Fk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~pk~Fvsrl----------LGmGDi~gl 303 (483)
T KOG0780|consen 236 FKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDPKPFVSRL----------LGMGDIEGL 303 (483)
T ss_pred HHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCChHHHHHHH----------hccccHHHH
Confidence 5556666 3333321 234455554 5689998888876655444311 1111 144899999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 544 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 544 a~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
.+.+.++..+. ..++.++-..-+|+...+.+++..++.
T Consensus 304 vek~~ev~~~d----~~el~~kl~~gkFtlrd~y~Qfq~imk 341 (483)
T KOG0780|consen 304 VEKVQEVGKDD----AKELVEKLKQGKFTLRDFYDQFQNIMK 341 (483)
T ss_pred HHHHHHHhhhh----HHHHHHHHHhCCccHHHHHHHHHHHHh
Confidence 99999988442 223333444568999988888887765
|
|
| >PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P | Back alignment and domain information |
|---|
Probab=82.29 E-value=74 Score=33.94 Aligned_cols=115 Identities=12% Similarity=0.046 Sum_probs=68.4
Q ss_pred HHHHHHHHHhCCCC-CCCCcEEEEEccCccccC-HHHHHHHHHhcccCCeEEEEEecCC-hhHHHHHHH--HH--H--HC
Q 007212 386 LLKEALQAEVGLPV-DRNIPVIGFIGRLEEQKG-SDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQ--LE--I--LY 456 (612)
Q Consensus 386 ~~~~~l~~~~gl~~-~~~~~~i~~iGrl~~~Kg-~d~li~A~~~l~~~~~~lvivG~g~-~~~~~~l~~--l~--~--~~ 456 (612)
..+.++.+++|++. .++..+|..++ ..+. +..++++++.. ...+.+.|.++-. ..+...+.. +. . +.
T Consensus 166 ~~~~~~~~~lg~~~~~~~~~~vslF~---Ye~~~l~~ll~~~~~~-~~pv~llvp~g~~~~~~~~~~~~~~~~~g~~~~~ 241 (374)
T PF10093_consen 166 AARAAFLRRLGLPEPEPGALRVSLFC---YENAALASLLDAWAAS-PKPVHLLVPEGRALNSLAAWLGDALLQAGDSWQR 241 (374)
T ss_pred HHHHHHHHHcCCCCCCCCCeEEEEEe---CCchHHHHHHHHHhcC-CCCeEEEecCCccHHHHHHHhccccccCcccccc
Confidence 34677888999963 23334443333 2333 78888888865 3567777766432 222222210 00 0 11
Q ss_pred C-CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC
Q 007212 457 P-EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 457 ~-~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+ ..+..++-.+.+....++..||+-++=-. =+++-|..+|+|.|=.-.
T Consensus 242 g~l~l~~lPF~~Q~~yD~LLw~cD~NfVRGE-----DSfVRAqwAgkPFvWhIY 290 (374)
T PF10093_consen 242 GNLTLHVLPFVPQDDYDRLLWACDFNFVRGE-----DSFVRAQWAGKPFVWHIY 290 (374)
T ss_pred CCeEEEECCCCCHHHHHHHHHhCccceEecc-----hHHHHHHHhCCCceEecC
Confidence 1 23444445578888899999999885332 257889999999885543
|
The function is unknown. |
| >PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6 | Back alignment and domain information |
|---|
Probab=82.05 E-value=1.6 Score=38.50 Aligned_cols=40 Identities=25% Similarity=0.279 Sum_probs=25.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+|+-. |.....=-.+-+..|+.+.+++||+|.++.+.
T Consensus 1 Mki~fvmD---pi~~i~~~kDTT~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 1 MKIAFVMD---PIESIKPYKDTTFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp -EEEEEES----GGG--TTT-HHHHHHHHHHHTT-EEEEE-GG
T ss_pred CeEEEEeC---CHHHCCCCCChHHHHHHHHHHCCCEEEEEEcC
Confidence 89999986 32111111345678999999999999999987
|
3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A. |
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=81.39 E-value=26 Score=38.94 Aligned_cols=140 Identities=12% Similarity=0.077 Sum_probs=71.2
Q ss_pred cEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEEecCCh------------hHHHH-HHHHHHHCCCceEEEeccCh
Q 007212 404 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKK------------PMEKQ-LEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 404 ~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvivG~g~~------------~~~~~-l~~l~~~~~~~v~~~~~~~~ 468 (612)
.+++..|.+. ..+-+..++.+++.+ +.+|+++-.++. ...+. -....++.+++.....+.+.
T Consensus 276 vvyvsfGS~~~~~~~~~~~la~~l~~~---~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ 352 (481)
T PLN02554 276 VVFLCFGSMGGFSEEQAREIAIALERS---GHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQ 352 (481)
T ss_pred EEEEeccccccCCHHHHHHHHHHHHHc---CCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCH
Confidence 5677788863 344666666666665 446555432210 00000 01111112233444444444
Q ss_pred HHHHHHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCC----Ccc-cceecCcceEEeccc-cccc--ccCCCCC
Q 007212 469 PLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLV-DTVEEGFTGFQMGSF-SVDC--EAVDPVD 539 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~-e~v~~g~~G~~~~~~-~~~~--~~v~~~d 539 (612)
. .++++..+..+-+. || ++++||+.+|+|+|+.... ... ..++.-+.|..+..- ..+- .--..-+
T Consensus 353 ~---~iL~H~~v~~FvtH---~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~ 426 (481)
T PLN02554 353 V---AVLAKPAIGGFVTH---CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVT 426 (481)
T ss_pred H---HHhCCcccCccccc---CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEc
Confidence 3 36755544333343 44 4799999999999987643 222 234443456654200 0000 0001236
Q ss_pred HHHHHHHHHHHHH
Q 007212 540 VAAVSTTVRRALA 552 (612)
Q Consensus 540 ~~~la~~i~~ll~ 552 (612)
.+++.++|++++.
T Consensus 427 ~e~l~~av~~vm~ 439 (481)
T PLN02554 427 AEEIERGIRCLME 439 (481)
T ss_pred HHHHHHHHHHHhc
Confidence 7899999999996
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=81.36 E-value=27 Score=38.78 Aligned_cols=82 Identities=12% Similarity=0.015 Sum_probs=51.1
Q ss_pred eEEEeccChHHHHHHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccce-ecCcceEEecccccccc
Q 007212 460 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCE 533 (612)
Q Consensus 460 v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~~~~~~~~~~~ 533 (612)
+....+.++.. ++++..+..+-+. || ++.+||+.+|+|+|+....+ ....+ +.-+.|..+...+
T Consensus 340 ~vv~~W~PQ~~---iL~h~~vg~FitH---~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~---- 409 (481)
T PLN02992 340 FVVPSWAPQAE---ILAHQAVGGFLTH---CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK---- 409 (481)
T ss_pred EEEeecCCHHH---HhCCcccCeeEec---CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC----
Confidence 44444544443 7888887444343 44 47999999999999886432 33344 2334566541000
Q ss_pred cCCCCCHHHHHHHHHHHHHh
Q 007212 534 AVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 534 ~v~~~d~~~la~~i~~ll~~ 553 (612)
..-+.++++++|.+++.+
T Consensus 410 --~~~~~~~l~~av~~vm~~ 427 (481)
T PLN02992 410 --EVISRSKIEALVRKVMVE 427 (481)
T ss_pred --CcccHHHHHHHHHHHhcC
Confidence 124778999999999975
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=80.80 E-value=6.1 Score=40.06 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=58.0
Q ss_pred CCCcEEEEEccCccc-------cCHHHHHHHHHhccc--CCeEEEEEecCCh---hHHHHHHHHHHHCCCceEEEeccCh
Q 007212 401 RNIPVIGFIGRLEEQ-------KGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 401 ~~~~~i~~iGrl~~~-------Kg~d~li~A~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~~~~~v~~~~~~~~ 468 (612)
.+++.|++....... .....+++.+..+.+ ++.+++|==.... .....+.++.. .++ +.... +.
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~-~~~-~~~~~--~~ 190 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN-LPN-VVIID--DD 190 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc-CCC-eEEEC--CC
Confidence 355788888887654 234445555555543 5788876443210 01122222222 222 22221 22
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC
Q 007212 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
-....++..||.++.-+ +.+.+||+.+|+||++-..
T Consensus 191 ~~~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 191 VNLYELLEQSDAVVTIN-----STVGLEALLHGKPVIVFGR 226 (269)
T ss_pred CCHHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEecC
Confidence 23446899999988543 5789999999999999754
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=80.64 E-value=13 Score=38.80 Aligned_cols=98 Identities=11% Similarity=0.093 Sum_probs=61.2
Q ss_pred cEEEEEccCccccC--HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg--~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.+++..|.-.+.|. .+...+.+..+.+.+.++++.|.++. .++..+++....+ .+...+..+-.++..+++.||++
T Consensus 180 ~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~-e~~~~~~i~~~~~-~~~l~g~~sL~elaali~~a~l~ 257 (322)
T PRK10964 180 YLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH-EEQRAKRLAEGFP-YVEVLPKLSLEQVARVLAGAKAV 257 (322)
T ss_pred eEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHccCC-cceecCCCCHHHHHHHHHhCCEE
Confidence 33344554345564 34677777777656788888633331 2334455544333 34445666777777899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
|-... ..+-=|-|+|+|+|+-=
T Consensus 258 I~nDS-----Gp~HlA~A~g~p~valf 279 (322)
T PRK10964 258 VSVDT-----GLSHLTAALDRPNITLY 279 (322)
T ss_pred EecCC-----cHHHHHHHhCCCEEEEE
Confidence 96543 33444889999998754
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=80.44 E-value=42 Score=36.95 Aligned_cols=73 Identities=4% Similarity=-0.061 Sum_probs=45.3
Q ss_pred HHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceec-CcceEEecccccccccCCCCCHHHHHHHHH
Q 007212 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 474 i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~i~ 548 (612)
++++..+..+-+. +=-++.+||+.+|+|+|+-...+ ....+.+ -+.|+.+... +. ..-+.+++.++|+
T Consensus 330 vL~h~~v~~FvtH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~--~~---~~~~~e~i~~av~ 402 (453)
T PLN02764 330 ILSHPSVGCFVSH--CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVARE--ET---GWFSKESLRDAIN 402 (453)
T ss_pred HhcCcccCeEEec--CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccc--cC---CccCHHHHHHHHH
Confidence 6777655333343 22357999999999999876533 3334432 3456543100 00 0237899999999
Q ss_pred HHHHh
Q 007212 549 RALAT 553 (612)
Q Consensus 549 ~ll~~ 553 (612)
+++++
T Consensus 403 ~vm~~ 407 (453)
T PLN02764 403 SVMKR 407 (453)
T ss_pred HHhcC
Confidence 99976
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=80.15 E-value=19 Score=39.96 Aligned_cols=137 Identities=13% Similarity=0.043 Sum_probs=69.6
Q ss_pred cEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEE-ecC--ChhHH-HHH-HHHHHHCCCceEEEeccChHHHHHHHH
Q 007212 404 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVL-GTG--KKPME-KQL-EQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 404 ~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lviv-G~g--~~~~~-~~l-~~l~~~~~~~v~~~~~~~~~~~~~i~~ 476 (612)
.+++..|.+. ..+-+..++.++. ..+.+|+++ ... ..... ..+ +....+.+++.....+.+... +++
T Consensus 279 VvyvsfGS~~~~~~~q~~ela~~l~---~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~---iL~ 352 (480)
T PLN02555 279 VVYISFGTVVYLKQEQIDEIAYGVL---NSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEK---VLA 352 (480)
T ss_pred eeEEEeccccCCCHHHHHHHHHHHH---hcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHH---HhC
Confidence 5677778764 2333444444444 345576665 311 00000 000 112222334454444444433 674
Q ss_pred h--ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC----CcccceecC-cceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 477 G--ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 477 ~--aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
+ +..|| +. +=-++.+||+.+|+|+|+...- .....+.+. +.|+.++....+- ..-+.+++.++|++
T Consensus 353 H~~v~~Fv--tH--~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~---~~v~~~~v~~~v~~ 425 (480)
T PLN02555 353 HPSVACFV--TH--CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAEN---KLITREEVAECLLE 425 (480)
T ss_pred CCccCeEE--ec--CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCcccc---CcCcHHHHHHHHHH
Confidence 4 44455 33 1234799999999999987643 233334443 5676542100000 11257899999999
Q ss_pred HHHh
Q 007212 550 ALAT 553 (612)
Q Consensus 550 ll~~ 553 (612)
++.+
T Consensus 426 vm~~ 429 (480)
T PLN02555 426 ATVG 429 (480)
T ss_pred HhcC
Confidence 9965
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 612 | ||||
| 3vue_A | 536 | Crystal Structure Of Rice Granule Bound Starch Synt | 0.0 | ||
| 1rzu_A | 485 | Crystal Structure Of The Glycogen Synthase From A. | 1e-52 | ||
| 2qzs_A | 485 | Crystal Structure Of Wild-Type E.Coli Gs In Complex | 3e-52 | ||
| 3d1j_A | 477 | Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408 | 3e-52 | ||
| 3cop_A | 485 | Crystal Structure Of E.Coli Gs Mutant E377a In Comp | 2e-51 | ||
| 1rzv_A | 485 | Crystal Structure Of The Glycogen Synthase From Agr | 6e-49 | ||
| 2bis_A | 440 | Structure Of Glycogen Synthase From Pyrococcus Abys | 2e-11 | ||
| 3l01_A | 428 | Crystal Structure Of Monomeric Glycogen Synthase Fr | 2e-11 | ||
| 3fro_A | 439 | Crystal Structure Of Pyrococcus Abyssi Glycogen Syn | 3e-11 | ||
| 2bfw_A | 200 | Structure Of The C Domain Of Glycogen Synthase From | 1e-10 | ||
| 3c4q_A | 426 | Structure Of The Retaining Glycosyltransferase Msha | 9e-06 | ||
| 3c48_A | 438 | Structure Of The Retaining Glycosyltransferase Msha | 9e-06 | ||
| 3oka_A | 381 | Crystal Structure Of Corynebacterium Glutamicum Pim | 8e-05 | ||
| 3okc_A | 394 | Crystal Structure Of Corynebacterium Glutamicum Pim | 8e-05 |
| >pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536 | Back alignment and structure |
|
| >pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp Length = 485 | Back alignment and structure |
|
| >pdb|2QZS|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) Length = 485 | Back alignment and structure |
|
| >pdb|3D1J|A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408s) Length = 477 | Back alignment and structure |
|
| >pdb|3COP|A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso Length = 485 | Back alignment and structure |
|
| >pdb|1RZV|A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) Length = 485 | Back alignment and structure |
|
| >pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 | Back alignment and structure |
|
| >pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 | Back alignment and structure |
|
| >pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 | Back alignment and structure |
|
| >pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi Length = 200 | Back alignment and structure |
|
| >pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426 | Back alignment and structure |
|
| >pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438 | Back alignment and structure |
|
| >pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381 | Back alignment and structure |
|
| >pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485 | Back alignment and structure |
|---|
Score = 611 bits (1579), Expect = 0.0
Identities = 165/510 (32%), Positives = 244/510 (47%), Gaps = 52/510 (10%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
+N+L V +E+ P KTGGL DV+G LP AL A+G R T+ P Y K A V
Sbjct: 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEF 60
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
EK +D + +D P + + G Y +TG+DY DN RF+ L
Sbjct: 61 TDLLGEKADLLEVQHERLDLLILDAPAYYERSGG-----PYLGQTGKDYPDNWKRFAALS 115
Query: 205 QAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 264
AA + G + + A+DW ++ P Y++ +
Sbjct: 116 LAAARIGAGVLP----------GWRPDMVHAHDWQAAMTPVYMRYAE-----TPEIPSLL 160
Query: 265 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324
IHNIA+QG+F F L LPA + I+ YN ++++K G+ + + TV
Sbjct: 161 TIHNIAFQGQFGANIFSKLALPAHA-FGMEGIEYYND------VSFLKGGLQTATALSTV 213
Query: 325 SPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 382
SP YA+E+++ E G+ L+ +I R + GIVNG+D WNP TD I Y A+ +
Sbjct: 214 SPSYAEEILTAE-FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAAN-LK 271
Query: 383 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK 442
+ L K+A+ + D P+ I RL QKG D++A A+ + +++VLG G
Sbjct: 272 NRALNKKAVAEHFRIDDD-GSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD 330
Query: 443 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 502
+E L + + +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG
Sbjct: 331 VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC 390
Query: 503 VPIVASTGGLVDTVE---------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553
+P+VA TGGL DTV + TG Q PV + + +RR +
Sbjct: 391 IPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVRY 440
Query: 554 YGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 582
Y L +M K GM D+SW+ A +
Sbjct: 441 YHDPKLWTQMQKLGMKSDVSWEKSAGLYAA 470
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485 | Back alignment and structure |
|---|
Score = 609 bits (1574), Expect = 0.0
Identities = 151/524 (28%), Positives = 240/524 (45%), Gaps = 57/524 (10%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW-DTDVVIEL 143
+ +L V +E+ P KTGGL DV+G LP A A+G + P + + D VV
Sbjct: 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRR 60
Query: 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLL 203
+ H GV +D P + Y Y DN LRF+LL
Sbjct: 61 DTFA--GHITLLFGHYNGVGIYLIDAPHLYDR-----PGSPYHDTNLFAYTDNVLRFALL 113
Query: 204 CQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVV 263
E L+ + V A+DWH L P YL +P AK V
Sbjct: 114 GWVGAEMASGLDP----------FWRPDVVHAHDWHAGLAPAYLAARGRP------AKSV 157
Query: 264 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323
F +HN+AYQG F + LP F + ++ + I+++KAG+ +D +
Sbjct: 158 FTVHNLAYQGMFYAHHMNDIQLPWSF-FNIHGLEFNGQ------ISFLKAGLYYADHITA 210
Query: 324 VSPHYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379
VSP YA+E+ + ++ ++ R+ + G++NG+D + W+P TD + +Y T
Sbjct: 211 VSPTYAREITEPQ-FAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDT 269
Query: 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLG 439
++ K K LQ +GL VD +P+ + RL QKG D++ A+P +++ Q+ +LG
Sbjct: 270 -LEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLG 328
Query: 440 TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 499
G +++ YP + ++ +H I+ GAD IL+PSRFEPCGL QL+ ++
Sbjct: 329 AGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLK 388
Query: 500 YGTVPIVASTGGLVDTVEEGF---------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550
YGT+P+V TGGL DTV + +GF + + ++ +RRA
Sbjct: 389 YGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIRRA 438
Query: 551 LATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSE 593
+ +L + + MA D SW+ AK + E L++
Sbjct: 439 FVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLEHHH 482
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439 | Back alignment and structure |
|---|
Score = 447 bits (1153), Expect = e-153
Identities = 101/504 (20%), Positives = 176/504 (34%), Gaps = 87/504 (17%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
+ +L +G E P K GGL + L + ALA+ GH V+ P + +++ + +++
Sbjct: 3 MKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE----IGKIR 57
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
V + +V+ + + + + +YG + +
Sbjct: 58 VFGEEVQVKVSYEERGNLRIYRIGGGLL-------DSEDVYG----PGWDGLIRKAVTFG 106
Query: 205 QAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 264
+A++ L V +DWHT +K +K VF
Sbjct: 107 RASVLLLNDLLREEPLPD---------VVHFHDWHTVFAGALIKKYFKIP-------AVF 150
Query: 265 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324
IH + A F L + Y I+ G +D+V TV
Sbjct: 151 TIHRLNKSKLPA-FYFHEAGLSE--------LAPYPD------IDPEHTGGYIADIVTTV 195
Query: 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384
S Y + G + + I + NG+D WN ++
Sbjct: 196 SRGYLIDE-----WGFFRN---FEGKITYVFNGIDCSFWNESYLT------------GSR 235
Query: 385 PLLKEALQAEVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK----ENVQIIVLG 439
K++L ++ G+ FIGR QKG D+L AI + ++ I++G
Sbjct: 236 DERKKSLLSKFGMDEG---VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIG 292
Query: 440 TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 499
G +E LE + + + DF++IPS FEP GL+ L AM
Sbjct: 293 KGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMC 352
Query: 500 YGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559
G +PI ++ GGL D + TG D ++ + +AL +
Sbjct: 353 LGAIPIASAVGGLRDIITNE-TGI---LV-------KAGDPGELANAILKALELSRSDLS 401
Query: 560 A-EMMKNGMAQDLSWKGPAKKWEE 582
A SW+ A+++ +
Sbjct: 402 KFRENCKKRAMSFSWEKSAERYVK 425
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 | Back alignment and structure |
|---|
Score = 277 bits (711), Expect = 1e-90
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 32/226 (14%)
Query: 353 GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL 412
G NG+D WN ++ K++L ++ G+ FIGR
Sbjct: 1 GSHNGIDCSFWNESYLT------------GSRDERKKSLLSKFGMDEG---VTFMFIGRF 45
Query: 413 -EEQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467
QKG D+L AI + ++ I++G G +E LE + +
Sbjct: 46 DRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLS 105
Query: 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 527
+ DF++IPS FEP GL+ L AM G +PI ++ GGL D + TG
Sbjct: 106 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGIL--- 161
Query: 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 573
V D ++ + +AL L++ +N + +S+
Sbjct: 162 -------VKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMSF 199
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-23
Identities = 51/295 (17%), Positives = 99/295 (33%), Gaps = 62/295 (21%)
Query: 299 YNKPVRGRKINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 357
+N + + GI +SD+V VS E EL + I+ + N
Sbjct: 137 ITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETH-------ELVKPNKD--IQTVYNF 187
Query: 358 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 417
+D + + L+ E G+ ++ I + K
Sbjct: 188 IDERVYFKRD--------------------MTQLKKEYGISESE--KILIHISNFRKVKR 225
Query: 418 SDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA---KF--NIPLA 471
+ A + E + +++++G G P + QL K + F
Sbjct: 226 VQDVVQAFAKIVTEVDAKLLLVGDG--PEFCTILQLV-----KNLHIEDRVLFLGKQDNV 278
Query: 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSV 530
++A +D +L+ S E GL+ L AM G VP + + GG+ + ++ G TG+
Sbjct: 279 AELLAMSDLMLLLSEKESFGLVLLEAMACG-VPCIGTRVGGIPEVIQHGDTGY------- 330
Query: 531 DCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMA---QDLSWKGPAKKWEE 582
+ D V+ + L + M + + + ++E
Sbjct: 331 ---LCEVGDTTGVADQAIQLLKD--EELHRNMGERARESVYEQFRSEKIVSQYET 380
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 37/279 (13%), Positives = 88/279 (31%), Gaps = 51/279 (18%)
Query: 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 376
+S ++ ++ + + E + + G+
Sbjct: 136 KSTKLMMLTDKQIADFQ--KHYQTEPERFQI------LPPGIYPDRKYS----------- 176
Query: 377 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII 436
+ P +E + + G+ + ++ +G +KG D A+ +
Sbjct: 177 -----EQIPNSREIYRQKNGIKEQQ--NLLLQVGSDFGRKGVDRSIEALASLPESLRHNT 229
Query: 437 VLGTGKKPMEKQLEQLEILYPEKARGVA---KFNIPLAHM--IIAGADFILIPSRFEPCG 491
+L + ++ E L + GV F + ++A AD +L P+ E G
Sbjct: 230 LLFVVGQDKPRKFEALA-----EKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAG 284
Query: 492 LIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550
++ L A+ G P++ + G + + G + +P ++ +R+A
Sbjct: 285 IVLLEAITAGL-PVLTTAVCGYAHYIADANCGTVI---------AEPFSQEQLNEVLRKA 334
Query: 551 LATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 587
L + +N A +K + +
Sbjct: 335 LTQ--SPLRMAWAENARHYADTQDLYSLPEKAADIITGG 371
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 2e-22
Identities = 61/279 (21%), Positives = 104/279 (37%), Gaps = 61/279 (21%)
Query: 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 376
+D++ + Q+L+ + D I + G DV+ ++P D+
Sbjct: 184 NADVLAVNTQEEMQDLM--HHYDADPDRISV------VSPGADVELYSPGNDR------- 228
Query: 377 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE----N 432
E + E+G+P+ V+ F+GRL+ KG +L A+ N
Sbjct: 229 ----------ATERSRRELGIPLHT--KVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRN 276
Query: 433 VQIIVLG--TGKKPMEKQLEQLEILYPEKARGVAK---FNIPLAH----MIIAGADFILI 483
+++I+ G +G + + GV K F P + AD + +
Sbjct: 277 LRVIICGGPSGPNATPDTYRHMA-----EELGVEKRIRFLDPRPPSELVAVYRAADIVAV 331
Query: 484 PSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542
PS E GL+ + A GT P++A+ GGL V EG TG VD A
Sbjct: 332 PSFNESFGLVAMEAQASGT-PVIAARVGGLPIAVAEGETGL----------LVDGHSPHA 380
Query: 543 VSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKK 579
+ + L + M ++ A+ SW A +
Sbjct: 381 WADALATLLDD--DETRIRMGEDAVEHARTFSWAATAAQ 417
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 2e-20
Identities = 62/286 (21%), Positives = 104/286 (36%), Gaps = 71/286 (24%)
Query: 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 376
E D++ +S + + + +G+DV+ + P
Sbjct: 140 EVDVLTYISQYTLRRFK---SAFGSHPTFEH------LPSGVDVKRFTP----------- 179
Query: 377 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQ 434
A P K A + ++G PVI RL +KG D L A+P I + Q
Sbjct: 180 ------ATPEDKSATRKKLGFTDTT--PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQ 231
Query: 435 IIVLGTGKKPMEKQLEQLEILYPEKARGVAK-----FNIPLAHM--IIAGADFILIPSR- 486
++++G+G E L +L A V++ + M +A AD +P+R
Sbjct: 232 LLIVGSG--RYESTLRRL-------ATDVSQNVKFLGRLEYQDMINTLAAADIFAMPART 282
Query: 487 ------FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 539
E G++ L A G VP++A +GG +TV TG V+ D
Sbjct: 283 RGGGLDVEGLGIVYLEAQACG-VPVIAGTSGGAPETVTPA-TGL----------VVEGSD 330
Query: 540 VAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 582
V +S + L A M G + + SW+ ++
Sbjct: 331 VDKLSELLIELLDD--PIRRAAMGAAGRAHVEAEWSWEIMGERLTN 374
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 5e-20
Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 53/289 (18%)
Query: 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 376
+D ++ + S + ++ I G++ + ++
Sbjct: 190 YADKIIVSTSQERFGQYSHDLYRGAVNVEDDDK-FSVIPPGVNTRVFDGEYGD------- 241
Query: 377 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQ 434
K + + L+ ++G +P I RL+++K L A + +
Sbjct: 242 -----KIKAKITKYLERDLGSE-RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKAN 295
Query: 435 -IIVLGTGKKPMEKQLEQLEILYPE--------KARGVA-KFNIPLAHM----------I 474
++ L + P E + K ++ + +
Sbjct: 296 LVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYL 355
Query: 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCE 533
+ + S +EP GL + AM G P V + GG + ++ G G
Sbjct: 356 ASKGSVFALTSFYEPFGLAPVEAMASGL-PAVVTRNGGPAEILDGGKYGV---------- 404
Query: 534 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKGPAKK 579
VDP D ++ + +A + + + + G + +W+ A+
Sbjct: 405 LVDPEDPEDIARGLLKAFES--EETWSAYQEKGKQRVEERYTWQETARG 451
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 4e-18
Identities = 35/232 (15%), Positives = 72/232 (31%), Gaps = 52/232 (22%)
Query: 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLT 367
+++ + + D + P Y Q + + + +D
Sbjct: 166 WEFLRRFVEKYDRYIFHLPEYVQPELDRNKAVI-------------MPPSIDPLSEKN-- 210
Query: 368 DKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPH 427
++ K + + ++ P+I + R + KG +
Sbjct: 211 -------------VELKQTEILRILERFDVDPEK--PIITQVSRFDPWKGIFDVIEIYRK 255
Query: 428 FIKE--NVQIIVLGTG-------KKPMEKQLEQLEILYPEKARGVAK------FNIPLAH 472
++ VQ++++G EK L ++ + V + +
Sbjct: 256 VKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIG-----EDYDVKVLTNLIGVHAREVN 310
Query: 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGF 523
+D IL S E GL AM G P++ GG+ + +G TGF
Sbjct: 311 AFQRASDVILQMSIREGFGLTVTEAMWKG-KPVIGRAVGGIKFQIVDGETGF 361
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 86.6 bits (214), Expect = 9e-18
Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 38/257 (14%)
Query: 351 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIG 410
+ G D+ + P T++ + S + + + + + D+ P++ +
Sbjct: 521 FNIVSPGADMSIYFPYTEEKRRLTKFHSEI-EELLYSDVENKEHLCVLKDKKKPILFTMA 579
Query: 411 RLEEQKGSDILAAAIPHFIK--ENVQIIVLG---------TGKKPMEKQLEQLEILYPEK 459
RL+ K L + E ++V+G +K K++ L Y K
Sbjct: 580 RLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEY--K 637
Query: 460 ARGVAKF---------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 510
G ++ N L I + P+ +E GL + AM G G
Sbjct: 638 LNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG 697
Query: 511 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGM- 567
G + + G +GF +DP + T+ E+ K G+
Sbjct: 698 GPAEIIVHGKSGF----------HIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQ 747
Query: 568 --AQDLSWKGPAKKWEE 582
+ +W+ +++
Sbjct: 748 RIEEKYTWQIYSQRLLT 764
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 77.2 bits (189), Expect = 6e-15
Identities = 31/252 (12%), Positives = 72/252 (28%), Gaps = 48/252 (19%)
Query: 183 KIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSL 242
I P + ++ + L + + +V ++W +
Sbjct: 147 GIPSPENDFET-NDAILLGYTVAWFLGE-----------VAHLDSQHAIVAHFHEWLAGV 194
Query: 243 IPCYLKTMYKPKGMYKSAKVVFCIH------NIAYQGRFAFEDFGLLNLPAQFKSSFDFI 296
+ +F H + G F F + L + D
Sbjct: 195 ALPLCRKRRID------VVTIFTTHATLLGRYLCASGSFDFYN----CLES-----VDVD 239
Query: 297 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356
+ + +A +D+ TVS A E ++++++ + N
Sbjct: 240 HEAGRFGIYHRYCIERAAAHSADVFTTVSQITAF----------EAEHLLKRKPDGILPN 289
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQ 415
G++V ++ + + D ++ +D + GR E +
Sbjct: 290 GLNVIKFQAFHEFQNLHALKKEKINDF---VRGHFHGCFDFDLDNTLYFF-IAGRYEYKN 345
Query: 416 KGSDILAAAIPH 427
KG+D+ A+
Sbjct: 346 KGADMFIEALAR 357
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 2e-07
Identities = 44/318 (13%), Positives = 89/318 (27%), Gaps = 30/318 (9%)
Query: 287 AQFKSSFDFI--DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 344
F FDF + + GR K G DM + L K +
Sbjct: 319 GHFHGCFDFDLDNTLYFFIAGRYEYKNK-GA---DMFIEALARLNYRLKVSGSKKTVVAF 374
Query: 345 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL---LKEALQAEVG-LPVD 400
I+ ++ + ++ +T + + ++ LP D
Sbjct: 375 IVMPAKNNSF--TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTD 432
Query: 401 RNI------PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEI 454
V+ L ++ L + H + ++ ++L ++ +
Sbjct: 433 LGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRV 492
Query: 455 ---LYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 511
+PE + G + PS +EP G G I + G
Sbjct: 493 KMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552
Query: 512 LVDTVEEGFTGFQM---GSFSVDCEAVDPVDVA-AVSTTVRRALATYGTQALAEMMKNG- 566
+E+ Q G + VD P + + + + Q +N
Sbjct: 553 FGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQ--RINQRNAT 610
Query: 567 --MAQDLSWKGPAKKWEE 582
++ L WK ++ +
Sbjct: 611 EALSDLLDWKRMGLEYVK 628
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 8e-15
Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 40/190 (21%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKAR- 461
I +GR +K +L A+ + ++ +++ G G P EK+++ L A+
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKG--PDEKKIKLL-------AQK 53
Query: 462 -GVAKF-------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST--GG 511
GV + I+ + + E + L A+ G VP++A++
Sbjct: 54 LGVKAEFGFVNSNELLE---ILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSA 110
Query: 512 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQ 569
+ + +P + +S + L M A
Sbjct: 111 TRQFALDERSL------------FEPNNAKDLSAKIDWWLEN--KLERERMQNEYAKSAL 156
Query: 570 DLSWKGPAKK 579
+ + + +
Sbjct: 157 NYTLENSVIQ 166
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 2e-14
Identities = 49/286 (17%), Positives = 82/286 (28%), Gaps = 91/286 (31%)
Query: 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDK 369
++ + + VS + + I NG+DV +
Sbjct: 153 ILRPYHEKIIGRIAVSDLARRWQMEALGSDAVE-----------IPNGVDVASFAD---- 197
Query: 370 YIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHF 428
A + R + F+GR E +KG +L AA+P
Sbjct: 198 -----------------------APLLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKL 234
Query: 429 IKE--NVQIIVLGTGKKPMEKQLEQLEIL-----------YPEKARGVAKFNIPLAHMII 475
+ +V+I+++G G ++ EQ L KA +
Sbjct: 235 VARFPDVEILIVGRG--DEDELREQAGDLAGHLRFLGQVDDATKAS------------AM 280
Query: 476 AGADFILIPSR-FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCE 533
AD P E G++ + AM GT +VAS + +G G
Sbjct: 281 RSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDAFRRVLADGDAGR---------- 329
Query: 534 AVDPVDVAAVSTTVRRAL------ATYGTQALAEMMKNGMAQDLSW 573
V D ++ + L A Y +A W
Sbjct: 330 LVPVDDADGMAAALIGILEDDQLRAGYVARASER------VHRYDW 369
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 8e-11
Identities = 19/224 (8%), Positives = 68/224 (30%), Gaps = 25/224 (11%)
Query: 366 LTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAA 424
L + Y+ + +P + L+ + + +I GR ++ ++ A
Sbjct: 205 LKQYFNNKGYNFTDEYFFQPKINTTLKNYINDKRQKE-KIILVYGRPSVKRNAFTLIVEA 263
Query: 425 IPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM--IIAGAD 479
+ F++ + + ++ G+K + L + + + L ++ +
Sbjct: 264 LKIFVQKYDRSNEWKIISVGEKHKDIAL-------GKGIHLNSLGKLTLEDYADLLKRSS 316
Query: 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 539
+ L +G ++ + D ++ ++
Sbjct: 317 IGISLMISPHPSYPPLEMAHFGL-RVITNKYENKDLSNWHSNIVS----------LEQLN 365
Query: 540 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 583
++ T+ ++ + + + + M ++ +E
Sbjct: 366 PENIAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFSFIKEI 409
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 2e-10
Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 17/141 (12%)
Query: 395 VGLPVDRNI-------PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEK 447
PV+ + + R+ +K ++ ++ ++ ++G
Sbjct: 8 HSHPVETSKFKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWF--SKGD 63
Query: 448 QLEQLEILYPEKARGVAKF--NIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTV 503
E+ + A KF ++ +I + +L ++ E GL + AM G
Sbjct: 64 HAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK- 122
Query: 504 PIVAS-TGGLVDTVEEGFTGF 523
P++A GG +TV TG+
Sbjct: 123 PVIAVNEGGFKETVINEKTGY 143
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 59.8 bits (144), Expect = 1e-09
Identities = 56/397 (14%), Positives = 104/397 (26%), Gaps = 54/397 (13%)
Query: 236 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 295
++ I + ++++ + ++ F GL K D
Sbjct: 31 HEVIVFGIHAFGRSVHANIEEFD----AQTAEHVRGLNEQGFYYSGLSEFIDVHK--PDI 84
Query: 296 IDGYNKP-VRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 354
+ YN P V G + M + +VL V +N+ +
Sbjct: 85 VMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR----------ENLWWIFSHPKV 134
Query: 355 VNGMDVQEWNPLTDKYIGVKYDASTVMDAK-PLLKEALQAEVGLPVDRNIPVIGFIGRLE 413
V M + + G K + V + VGL + + + R
Sbjct: 135 VGVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNT 194
Query: 414 EQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471
+K DI A FI + + ++ L + L + + + F
Sbjct: 195 ARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNK 254
Query: 472 HMIIAG-------------ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 518
MI D I+ S E GL G I+++ GG D
Sbjct: 255 IMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSG 314
Query: 519 GF----------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM-KNG- 566
+ +D D+ A + + + K
Sbjct: 315 DCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVE-------AFTFFKDEKNRKEYGKRVQ 367
Query: 567 --MAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEI 601
+ +W + + +L S EE
Sbjct: 368 DFVKTKPTWDDISSDIIDFFNSLLRVESRETPGNEEH 404
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 18/170 (10%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 463
+ F+GR+ KG+ AA ++++ G + +++ Y +
Sbjct: 163 DFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPA--WEPEYFDEITRRYGSTVEPI 217
Query: 464 AKFNIPLAHMIIAGADFILIPSRF----------EPCGLIQLHAMRYGTVPIVAS-TGGL 512
+ ++A A +L S+ EP + A GT P+V + G L
Sbjct: 218 GEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGNGCL 276
Query: 513 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR-ALATYGTQALAE 561
+ V G+ EA + S VRR A+ +G +AE
Sbjct: 277 AEIVPSVGEVVGYGTDFAPDEARRTLAGLPASDEVRRAAVRLWGHVTIAE 326
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 4e-08
Identities = 52/371 (14%), Positives = 106/371 (28%), Gaps = 101/371 (27%)
Query: 41 RSLNIIDDLQ----VKTMASK---LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTE 93
L ++ ++Q L T+R + + + + ++ E
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRF--KQVTDFLSAATTTHISLDHHSMTLTPDE 302
Query: 94 V----APW--SKTGGL-GDVLGGLPPALAANGHRVMTIAPRYDQYK--DAWDTDVVIELK 144
V + + L +VL P L+ + +D +K + +IE
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWF----LAKVWGKTQSKIYGPRTGEDYQDNQLRF 200
+ + +E + R VF L+ +W D +
Sbjct: 363 L-NVLEPAEYRKMFDRLS--VFPPSAHIPTILLSLIWFD-----------VIKSDVMVVV 408
Query: 201 SLLCQAALEAPRILNLNSNKYFSGPYG-----KKNVVFVANDW--HTSLIPCY-LKTMYK 252
+ L + +L + + K + N++ H S++ Y + +
Sbjct: 409 NKLHKYSL-----VEKQPKESTISIPSIYLELKVK---LENEYALHRSIVDHYNIPKTFD 460
Query: 253 PKGM-------YKSAKVVFCIHNIAY-------QGRFA-----FEDF------------- 280
+ Y F H I + R F DF
Sbjct: 461 SDDLIPPYLDQY------FYSH-IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA 513
Query: 281 -----GLLNLPAQFKSSFDFI-DGYNKPVRGRKINWMKAGILESDMVLTVSPH--YAQEL 332
+LN Q K +I D N P R +N + + + + L S + +
Sbjct: 514 WNASGSILNTLQQLKFYKPYICD--NDPKYERLVNAILDFLPKIEENLICSKYTDLLRIA 571
Query: 333 VSGEDKGVELD 343
+ ED+ + +
Sbjct: 572 LMAEDEAIFEE 582
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 612 | |||
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.98 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.97 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.97 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.96 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 99.96 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.95 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.95 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.95 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.95 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.94 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.93 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 99.93 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.92 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.9 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.86 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.83 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.82 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.79 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.79 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.79 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.69 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.66 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.65 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.59 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.57 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.56 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.47 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.45 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.43 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.24 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.2 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 99.15 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.08 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.01 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.88 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.79 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.72 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.15 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.82 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.6 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.41 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 95.36 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 95.0 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 94.56 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 93.45 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 93.26 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 92.47 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 91.07 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 89.32 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 85.26 |
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-83 Score=712.70 Aligned_cols=529 Identities=70% Similarity=1.187 Sum_probs=459.9
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
..||||||++|++|+.|+||++++++.|+++|+++||+|.|++|.|+++.+.++......+.+.++.+.+++++...+||
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 87 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGV 87 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETTE
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECCc
Confidence 36999999999999999999999999999999999999999999999999988888888999999999999999999999
Q ss_pred eEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccc
Q 007212 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~ 242 (612)
+++++++|.++.+.+++++..+|++..|.+|.|+..||.+|+++++++++.+++....++.+.++++| |+|+||||+++
T Consensus 88 ~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~dd-IiH~hDW~t~l 166 (536)
T 3vue_A 88 DRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDV-VFVCNDWHTGP 166 (536)
T ss_dssp EEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCE-EEEEESGGGST
T ss_pred eEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCE-EEEECcchHHH
Confidence 99999999999999999999999999999999999999999999999999998888888888877766 69999999999
Q ss_pred hHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
+|.+++..+...+.+.++|+|+|+||+.+||.++...+..++++.......++...+..+.+...+++++.++..||.|+
T Consensus 167 ~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v~ 246 (536)
T 3vue_A 167 LASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVL 246 (536)
T ss_dssp HHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEEE
T ss_pred HHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEEE
Confidence 99999999888888889999999999999999999999999999888777777777777777788999999999999999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
|||+.+++++.+...+|.+++...+..++.+|+||+|.+.|+|.+++++..+|+..+....|...|..+++++|++.+++
T Consensus 247 tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~ 326 (536)
T 3vue_A 247 TVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRK 326 (536)
T ss_dssp ESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTT
T ss_pred EcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCC
Confidence 99999999998766777777767777899999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
.|+|+|+||+.++||++.|++|++++.+.+.+|+|+|.|+...+..++.+...+++++.+.+.++.++.+.+|++||++|
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v 406 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLA 406 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSEEE
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhheee
Confidence 99999999999999999999999999888999999999998888899999999999999999999999999999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 562 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 562 (612)
+||++|+||++++|||+||+|||+|++||++|+|.++.+||+++....++.+|++.|+++|+++|.++++.++++.++++
T Consensus 407 ~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~ 486 (536)
T 3vue_A 407 VPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEM 486 (536)
T ss_dssp ECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred cccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999888899999999999999999999987666788999
Q ss_pred HHHHHHhhcCcHHHHHHHHHHHHHHHHcCCCCCCCCCccchhhhhhcCCC
Q 007212 563 MKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 612 (612)
Q Consensus 563 ~~~~~~~~fsw~~~a~~~~~~y~~l~~~~~~~~~~~~~~~p~a~~~~~~~ 612 (612)
++++++++|||++++++|+++|++|...++.|+.++++++|+|.|+++||
T Consensus 487 ~~~am~~~fSW~~~A~~y~~ly~~L~~~~~~p~~~~~~~aP~~~~~~~~p 536 (536)
T 3vue_A 487 VRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 536 (536)
T ss_dssp HHHHHHSCCSSHHHHHHHHHHHHTTCC-----------------------
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCCCCCCC
Confidence 99999999999999999999999998888999999999999999999998
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-49 Score=433.30 Aligned_cols=461 Identities=32% Similarity=0.576 Sum_probs=348.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEE-EEE-eCCeeeEEEEEEeeecCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVI-ELK-VGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~gv 162 (612)
|||++|+.+++|+...||++.++.+|+++|+++||+|+|+++.++...+.+...... +.. .++ ...+.+....|+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gv 77 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAG---HITLLFGHYNGV 77 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTC---CEEEEEEEETTE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCC---cEEEEEEEECCc
Confidence 899999999988656899999999999999999999999999865433222111110 000 000 122333345799
Q ss_pred eEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccc
Q 007212 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~ 242 (612)
++++++.+.++.+ . ..+|+...+.+|.++..++..+...+.++++.+... .+||+ ||+|+|..++
T Consensus 78 ~v~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~Di-vh~~~~~~~~ 142 (485)
T 2qzs_A 78 GIYLIDAPHLYDR----P-GSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPF---------WRPDV-VHAHDWHAGL 142 (485)
T ss_dssp EEEEEECHHHHCC----S-SCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTT---------CCCSE-EEEETGGGTT
T ss_pred EEEEEeChhhccC----C-CCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccC---------CCCCE-EEeeccchhH
Confidence 9999876654432 0 014554445567778778877777777777654310 15895 9999999888
Q ss_pred hHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
++.+++... .++|+|+++|+..+++.+....+..++++...... .... +.....+++..++.+|.++
T Consensus 143 ~~~~~~~~~------~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~ad~vi 209 (485)
T 2qzs_A 143 APAYLAARG------RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNI----HGLE---FNGQISFLKAGLYYADHIT 209 (485)
T ss_dssp HHHHHHHTT------CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCST----TTTE---ETTEEEHHHHHHHHCSEEE
T ss_pred HHHHHhhcc------CCCCEEEEecCccccCCCCHHHHHhcCCCchhccc----cccc---ccccccHHHHHHHhcCeEE
Confidence 877766211 48999999999876555443333334443322110 0000 0112356778899999999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhh--hc--cCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNII--RK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~--~~--~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~ 398 (612)
++|+.+++.+.+. .+|...+.++ +. .++.+||||+|.+.|.|...+.+..+|+..+. ..+...+..+++++|++
T Consensus 210 ~~S~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~ 287 (485)
T 2qzs_A 210 AVSPTYAREITEP-QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTL-EDKAENKRQLQIAMGLK 287 (485)
T ss_dssp ESSHHHHHHTTSH-HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCG-GGGHHHHHHHHHHHTCC
T ss_pred ecCHHHHHHHhcc-ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccch-hHHHHhHHHHHHHcCCC
Confidence 9999999988741 1232211111 11 48999999999999998877666677777665 46666788899999998
Q ss_pred CCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 399 ~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
.+++.++|+|+||+.++||++.+++|++.+.+++++|+|+|+|+..+.+.+++++.++++++.++.++..+.+..+|+.|
T Consensus 288 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~a 367 (485)
T 2qzs_A 288 VDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGA 367 (485)
T ss_dssp CCTTSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHC
T ss_pred CCCCCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhC
Confidence 65466899999999999999999999999977899999999998778889999998887778767777888878999999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---------cceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
|++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ ++.|+++|+++|.+
T Consensus 368 dv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~ 437 (485)
T 2qzs_A 368 DVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIRR 437 (485)
T ss_dssp SEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------CSSSHHHHHHHHHH
T ss_pred CEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEE----------CCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 899987 99999999999999
Q ss_pred HH---HhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 550 AL---ATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 550 ll---~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++ ++ ++.+.++++++..++|||+.++++|+++|+++...
T Consensus 438 ll~~~~~--~~~~~~~~~~~~~~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 438 AFVLWSR--PSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp HHHHHTS--HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHcCC--HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHhhhh
Confidence 99 45 67888999999889999999999999999998654
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-49 Score=437.31 Aligned_cols=463 Identities=35% Similarity=0.569 Sum_probs=351.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEE-EEEeCCeeeEEEEEEeeecCce
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVI-ELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
|||++|+.+++|+...||++.++.+|+++|+++||+|+|+++.++.....++..... +..+... ...+..+....|++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gv~ 79 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLG-EKADLLEVQHERLD 79 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSS-CCEEEEEEEETTEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecC-CeEEEEEEEecCce
Confidence 899999999999645799999999999999999999999999865433221111000 0000000 01233334468999
Q ss_pred EEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhh-ccCCCCccCCCCCCCcEEEEeCCCcccc
Q 007212 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL-NLNSNKYFSGPYGKKNVVFVANDWHTSL 242 (612)
Q Consensus 164 ~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~pDvVi~~h~~~~~~ 242 (612)
+++++.+.++.+ . ..+|+...+.+|.++..++..+..++.++++.+ .. .+||+ ||+|+|.+++
T Consensus 80 v~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~Di-Ih~~~~~~~~ 143 (485)
T 1rzu_A 80 LLILDAPAYYER----S-GGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPG----------WRPDM-VHAHDWQAAM 143 (485)
T ss_dssp EEEEECHHHHCS----S-SCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSS----------CCCSE-EEEEHHHHTT
T ss_pred EEEEeChHHhCC----C-ccccCCcccccccchHHHHHHHHHHHHHHHHHhccC----------CCCCE-EEecccchhH
Confidence 999877654432 0 125554445667788888888888777777654 11 25895 9999998888
Q ss_pred hHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
++.+++... ..++|+|+++|+..+++.+....+..++++...... +.. .+.....+++..++.+|.++
T Consensus 144 ~~~~~~~~~-----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~ad~vi 211 (485)
T 1rzu_A 144 TPVYMRYAE-----TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGM----EGI---EYYNDVSFLKGGLQTATALS 211 (485)
T ss_dssp HHHHHHHSS-----SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSST----TTT---EETTEEEHHHHHHHHCSEEE
T ss_pred HHHHHhhcc-----cCCCCEEEEecCccccCCCCHHHHhhcCCChhhccc----ccc---cccccccHHHHHHhhcCEEE
Confidence 877776531 038899999999877665554444444444332110 000 00112356788899999999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 400 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 400 (612)
++|+..++.+.+. .+|..++.++ ...++.+||||+|.+.|.|..+..+..+|+..+. ..+...+..+++++|++.+
T Consensus 212 ~~S~~~~~~~~~~-~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~ 289 (485)
T 1rzu_A 212 TVSPSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDDD 289 (485)
T ss_dssp ESCHHHHHHTTSH-HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCCS
T ss_pred ecCHhHHHHHhcc-ccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccch-hhHHHhHHHHHHhcCCCCC
Confidence 9999999998741 1231111111 1238999999999999998876666667776654 5666678889999999864
Q ss_pred CCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 401 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 401 ~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
+ .++|+|+||+.++||++.+++|++.+.+++++|+|+|+|+..+++.+++++.++++++.++.+++.+.+..+|+.||+
T Consensus 290 ~-~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv 368 (485)
T 1rzu_A 290 G-SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDA 368 (485)
T ss_dssp S-SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred C-CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCE
Confidence 2 369999999999999999999999997789999999999877888999999888777886777788887899999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---------cceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
+|+||.+|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ ++.|+++|+++|.+++
T Consensus 369 ~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~ll 438 (485)
T 1rzu_A 369 IIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTV 438 (485)
T ss_dssp EEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHHH
T ss_pred EEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEe----------CCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 899987 8999999999999999
Q ss_pred ---HhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHcC
Q 007212 552 ---ATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 552 ---~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~~ 591 (612)
++ ++.+.++++++..++|||+.++++|+++|++++...
T Consensus 439 ~~~~~--~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 479 (485)
T 1rzu_A 439 RYYHD--PKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLISKG 479 (485)
T ss_dssp HHHTC--HHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHTC--
T ss_pred HHhCC--HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhCCC
Confidence 45 778889999998899999999999999999987543
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-47 Score=408.56 Aligned_cols=424 Identities=24% Similarity=0.337 Sum_probs=327.4
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
++|||++|+.+++| ...||.+.++.+|+++|+++||+|+|+++.++...+.. ...+.+-+.....+......+|+
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~gv 75 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE----IGKIRVFGEEVQVKVSYEERGNL 75 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE----EEEEEETTEEEEEEEEEEEETTE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhh----hccccccCcccceeeeeccCCCc
Confidence 47999999999988 56899999999999999999999999999876554421 11122233445566666678999
Q ss_pred eEEEEeCccccccccCCCCCcccCCCCCCCCchh-hHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc
Q 007212 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS 241 (612)
Q Consensus 163 ~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~-~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~ 241 (612)
++++++. .++.+ ..+|+. |.++ ..++..+...+.+.++.+-.. ..+||+ ||+|+|..+
T Consensus 76 ~v~~~~~-~~~~~------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~Di-i~~~~~~~~ 134 (439)
T 3fro_A 76 RIYRIGG-GLLDS------EDVYGP-----GWDGLIRKAVTFGRASVLLLNDLLRE--------EPLPDV-VHFHDWHTV 134 (439)
T ss_dssp EEEEEES-GGGGC------SSTTCS-----HHHHHHHHHHHHHHHHHHHHHHHTTT--------SCCCSE-EEEESGGGH
T ss_pred eEEEecc-hhccc------cccccC-----CcchhhhhhHHHHHHHHHHHHHHhcc--------CCCCeE-EEecchhhh
Confidence 9999987 44443 234432 5566 677778888888888876100 025895 999999988
Q ss_pred chHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEE
Q 007212 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~v 321 (612)
+++.+++.. .++|+|+++|+....+. +...+....+ ..........+++..++.+|.+
T Consensus 135 ~~~~~~~~~-------~~~~~v~~~h~~~~~~~-~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ad~i 192 (439)
T 3fro_A 135 FAGALIKKY-------FKIPAVFTIHRLNKSKL-PAFYFHEAGL--------------SELAPYPDIDPEHTGGYIADIV 192 (439)
T ss_dssp HHHHHHHHH-------HCCCEEEEESCCCCCCE-EHHHHHHTTC--------------GGGCCSSEECHHHHHHHHCSEE
T ss_pred hhHHHHhhc-------cCCCEEEEecccccccC-chHHhCcccc--------------ccccccceeeHhhhhhhhccEE
Confidence 888887754 48999999998764221 1100000000 0000112235678889999999
Q ss_pred EecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007212 322 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 401 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~ 401 (612)
+++|+.+++.... .++.. ..++.+||||+|.+.|.|...+ ..+...+..+++++|++.
T Consensus 193 i~~S~~~~~~~~~--~~~~~------~~~i~vi~ngvd~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~-- 250 (439)
T 3fro_A 193 TTVSRGYLIDEWG--FFRNF------EGKITYVFNGIDCSFWNESYLT------------GSRDERKKSLLSKFGMDE-- 250 (439)
T ss_dssp EESCHHHHHHTHH--HHGGG------TTSEEECCCCCCTTTSCGGGSC------------SCHHHHHHHHHHHHTCCS--
T ss_pred EecCHHHHHHHhh--hhhhc------CCceeecCCCCCchhcCccccc------------chhhhhHHHHHHHcCCCC--
Confidence 9999999888432 11222 3399999999999998775211 123455788999999963
Q ss_pred CCcEEEEEccCc-cccCHHHHHHHHHhccc----CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH
Q 007212 402 NIPVIGFIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 402 ~~~~i~~iGrl~-~~Kg~d~li~A~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~ 476 (612)
+ ++|+|+||+. +.||++.+++|++.+.+ ++++|+|+|+|+..+++.++++..++++.+.+.+.++.+++..+++
T Consensus 251 ~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 329 (439)
T 3fro_A 251 G-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYG 329 (439)
T ss_dssp C-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHT
T ss_pred C-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHH
Confidence 3 8999999999 99999999999999977 6999999999997788999999999884444455478888999999
Q ss_pred hccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH-hhC
Q 007212 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYG 555 (612)
Q Consensus 477 ~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~-~~~ 555 (612)
.||++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ +|+++ ++.|+++++++|.++++ +
T Consensus 330 ~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~----------~~~d~~~la~~i~~ll~~~-- 396 (439)
T 3fro_A 330 SVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILV----------KAGDPGELANAILKALELS-- 396 (439)
T ss_dssp TCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEE----------CTTCHHHHHHHHHHHHHHT--
T ss_pred HCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEe----------CCCCHHHHHHHHHHHHhcC--
Confidence 9999999999999999999999999999999999999999887 99987 99999999999999999 6
Q ss_pred HHHHHHHHHHHHH--hhcCcHHHHHHHHHHHHHHHHc
Q 007212 556 TQALAEMMKNGMA--QDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 556 ~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++.+.++++++.. ++|||+.++++|+++|++++.+
T Consensus 397 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 397 RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp TTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 4556666666632 7899999999999999998754
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=365.23 Aligned_cols=407 Identities=17% Similarity=0.232 Sum_probs=284.7
Q ss_pred cCCCccccccCCCceEEEEEecccCcc-----ccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeC
Q 007212 72 QNGPSLMIVCGVGLNILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVG 146 (612)
Q Consensus 72 ~~~~~~~~~~~~~MkIl~v~~~~~P~~-----~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~ 146 (612)
+..+++....++.|||++|+..|+|.. ..||.+.++..|+++|+++||+|+|+++........
T Consensus 8 ~~~~~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~------------ 75 (438)
T 3c48_A 8 HHHSSGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE------------ 75 (438)
T ss_dssp -----------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS------------
T ss_pred cccccCcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc------------
Confidence 344556666677899999999988832 369999999999999999999999999874321110
Q ss_pred CeeeEEEEEEeeecCceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHH-hhhhccCCCCccCCC
Q 007212 147 DKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGP 225 (612)
Q Consensus 147 ~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~-~~~l~~~~~~~~~~~ 225 (612)
......|++++.+....+... . ..+....+..+....++. ++..
T Consensus 76 --------~~~~~~~v~v~~~~~~~~~~~----------~------~~~~~~~~~~~~~~~~~~~~~~~----------- 120 (438)
T 3c48_A 76 --------IVRVAENLRVINIAAGPYEGL----------S------KEELPTQLAAFTGGMLSFTRREK----------- 120 (438)
T ss_dssp --------EEEEETTEEEEEECCSCSSSC----------C------GGGGGGGHHHHHHHHHHHHHHHT-----------
T ss_pred --------cccccCCeEEEEecCCCcccc----------c------hhHHHHHHHHHHHHHHHHHHhcc-----------
Confidence 011235677776643221100 0 000011112222333333 3322
Q ss_pred CCCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCC
Q 007212 226 YGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 305 (612)
Q Consensus 226 ~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (612)
.+||+ ||+|.|..++++..++.. .++|+|+++|+........ +...... ...
T Consensus 121 -~~~Di-v~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~~~~~------~~~~~~~-------------~~~ 172 (438)
T 3c48_A 121 -VTYDL-IHSHYWLSGQVGWLLRDL-------WRIPLIHTAHTLAAVKNSY------RDDSDTP-------------ESE 172 (438)
T ss_dssp -CCCSE-EEEEHHHHHHHHHHHHHH-------HTCCEEEECSSCHHHHSCC----------CCH-------------HHH
T ss_pred -CCCCE-EEeCCccHHHHHHHHHHH-------cCCCEEEEecCCccccccc------ccccCCc-------------chH
Confidence 13795 899987766666655544 3889999999754311000 0000000 000
Q ss_pred chhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccH
Q 007212 306 RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 306 ~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
....+.+..++.+|.++++|+..++.+.+. +|++.+ ++.+||||+|.+.|.+....
T Consensus 173 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--~g~~~~------k~~vi~ngvd~~~~~~~~~~---------------- 228 (438)
T 3c48_A 173 ARRICEQQLVDNADVLAVNTQEEMQDLMHH--YDADPD------RISVVSPGADVELYSPGNDR---------------- 228 (438)
T ss_dssp HHHHHHHHHHHHCSEEEESSHHHHHHHHHH--HCCCGG------GEEECCCCCCTTTSCCC-------------------
T ss_pred HHHHHHHHHHhcCCEEEEcCHHHHHHHHHH--hCCChh------heEEecCCccccccCCcccc----------------
Confidence 112334667889999999999999998752 455544 89999999999988765321
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C--CeEEEEEec----CChhHHHHHHHHHHHCC
Q 007212 386 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGT----GKKPMEKQLEQLEILYP 457 (612)
Q Consensus 386 ~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~--~~~lvivG~----g~~~~~~~l~~l~~~~~ 457 (612)
.+..++++++++.+ .++|+|+||+.++||++.+++|++.+.+ + +++|+|+|. |+ ..+.++++..+++
T Consensus 229 -~~~~~r~~~~~~~~--~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~--~~~~l~~~~~~~~ 303 (438)
T 3c48_A 229 -ATERSRRELGIPLH--TKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA--TPDTYRHMAEELG 303 (438)
T ss_dssp --CHHHHHHTTCCSS--SEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC--------CHHHHHHHHTT
T ss_pred -hhhhhHHhcCCCCC--CcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc--HHHHHHHHHHHcC
Confidence 12347888898754 4899999999999999999999999975 3 799999998 54 5566777766643
Q ss_pred --CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccC
Q 007212 458 --EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 458 --~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v 535 (612)
+++.+.+..+.+++..+|+.||++|+||..|+||++++|||+||+|||+++.||+.|++.++.+|+++
T Consensus 304 l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~---------- 373 (438)
T 3c48_A 304 VEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLV---------- 373 (438)
T ss_dssp CTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEE----------
T ss_pred CCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEEC----------
Confidence 57888888888888899999999999999999999999999999999999999999999999999987
Q ss_pred CCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHHHHHHHcCCCC
Q 007212 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAGSEP 594 (612)
Q Consensus 536 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y~~l~~~~~~~ 594 (612)
++.|+++++++|.+++++ ++.+.++++++. .+.|||+.++++|+++|++++......
T Consensus 374 ~~~d~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
T 3c48_A 374 DGHSPHAWADALATLLDD--DETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENVD 432 (438)
T ss_dssp SSCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhcccC
Confidence 899999999999999998 677777777662 334999999999999999999765443
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-40 Score=362.55 Aligned_cols=413 Identities=15% Similarity=0.135 Sum_probs=289.6
Q ss_pred CceEEEEEecccCcc---------ccccHHHHhhchHHHHHhCCCeEEEEEecCCccc-cccCccEEEEEEeCCeeeEEE
Q 007212 84 GLNILFVGTEVAPWS---------KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVR 153 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~---------~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 153 (612)
+|||++|+..++|.. ..||.+.++.+|+++|+++||+|+|+++...... ..+...
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~--------------- 71 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGE--------------- 71 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCS---------------
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhh---------------
Confidence 599999999887732 4699999999999999999999999998643211 111000
Q ss_pred EEEee--ecCceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcE
Q 007212 154 FFHCH--KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNV 231 (612)
Q Consensus 154 ~~~~~--~~gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDv 231 (612)
.... ..|++++.+....... .. ...-...+..+...+.+.++.... +||+
T Consensus 72 -~~~~~~~~gv~v~~~~~~~~~~----------~~------~~~~~~~~~~~~~~l~~~l~~~~~-----------~~Di 123 (499)
T 2r60_A 72 -IDYYQETNKVRIVRIPFGGDKF----------LP------KEELWPYLHEYVNKIINFYREEGK-----------FPQV 123 (499)
T ss_dssp -EEECTTCSSEEEEEECCSCSSC----------CC------GGGCGGGHHHHHHHHHHHHHHHTC-----------CCSE
T ss_pred -HHhccCCCCeEEEEecCCCcCC----------cC------HHHHHHHHHHHHHHHHHHHHhcCC-----------CCCE
Confidence 0001 2467777764321100 00 000000111223344445554311 4895
Q ss_pred EEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCC-cccccccccccCCCCCcCCchhHH
Q 007212 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINW 310 (612)
Q Consensus 232 Vi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 310 (612)
||+|.+..++++..++.. .++|+|+++|+..+..... +...+.. ..+...+. +.....+
T Consensus 124 -vh~~~~~~~~~~~~~~~~-------~~~p~v~~~H~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~ 183 (499)
T 2r60_A 124 -VTTHYGDGGLAGVLLKNI-------KGLPFTFTGHSLGAQKMEK---LNVNTSNFKEMDERFK---------FHRRIIA 183 (499)
T ss_dssp -EEEEHHHHHHHHHHHHHH-------HCCCEEEECSSCHHHHHHT---TCCCSTTSHHHHHHHC---------HHHHHHH
T ss_pred -EEEcCCcchHHHHHHHHh-------cCCcEEEEccCcccccchh---hccCCCCcchhhhhHH---------HHHHHHH
Confidence 899987666666655554 3889999999764321100 0000000 00000000 0011123
Q ss_pred HHHHHhhCCEEEecCHHHHHHHHcCcCCC-c----cchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccH
Q 007212 311 MKAGILESDMVLTVSPHYAQELVSGEDKG-V----ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 311 ~k~~l~~ad~vi~vS~~~~~~l~~~~~~G-~----~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
.+..++.+|.++++|+..++.+.+...+| + ..+ ++.+||||+|.+.|.|... .
T Consensus 184 ~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~------ki~vi~ngvd~~~~~~~~~----------------~ 241 (499)
T 2r60_A 184 ERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDD------KFSVIPPGVNTRVFDGEYG----------------D 241 (499)
T ss_dssp HHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGG------GEEECCCCBCTTTSSSCCC----------------H
T ss_pred HHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCC------CeEEECCCcChhhcCccch----------------h
Confidence 46778899999999999999987521134 3 333 8999999999998876532 1
Q ss_pred HHHHHHHHHhC-----CCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C-CeEEEEEec--CC-----------hh
Q 007212 386 LLKEALQAEVG-----LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-NVQIIVLGT--GK-----------KP 444 (612)
Q Consensus 386 ~~~~~l~~~~g-----l~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~-~~~lvivG~--g~-----------~~ 444 (612)
..+..+++++| ++. +.++|+|+||+.++||++.+++|++.+.+ + .++|+|+|+ |+ ..
T Consensus 242 ~~~~~~r~~~~~~~~~~~~--~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~ 319 (499)
T 2r60_A 242 KIKAKITKYLERDLGSERM--ELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKE 319 (499)
T ss_dssp HHHHHHHHHHHHHSCGGGT--TSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHH
T ss_pred hhHHHHHHHhcccccccCC--CCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchH
Confidence 22466788887 654 34899999999999999999999999965 2 468999998 32 11
Q ss_pred HHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc----cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec
Q 007212 445 MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 518 (612)
Q Consensus 445 ~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~a----Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 518 (612)
+.+.++++..+++ +++.+.+..+.+++..+|+.| |++|+||.+|+||++++|||+||+|||+|+.||+.|++.+
T Consensus 320 y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~ 399 (499)
T 2r60_A 320 ILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDG 399 (499)
T ss_dssp HHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGG
T ss_pred HHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcC
Confidence 2677888877654 579999888888899999999 9999999999999999999999999999999999999999
Q ss_pred CcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHHHcCCCCC
Q 007212 519 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGSEPG 595 (612)
Q Consensus 519 g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~~~~~~~~ 595 (612)
+.+|+++ ++.|+++++++|.+++++ ++.+.++++++ +.++|||+.++++|+++|++++.......
T Consensus 400 ~~~g~l~----------~~~d~~~la~~i~~ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~~~ 467 (499)
T 2r60_A 400 GKYGVLV----------DPEDPEDIARGLLKAFES--EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDEED 467 (499)
T ss_dssp GTSSEEE----------CTTCHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-----
T ss_pred CceEEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhhhc
Confidence 9999987 999999999999999997 67777777766 35669999999999999999998755443
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=352.56 Aligned_cols=369 Identities=21% Similarity=0.275 Sum_probs=280.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccc-cccCccEEEEEEeCCeeeEEEEEEeeec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|++|||++|+..|+|. .||.+.++..|+++| +||+|+|+++...... ..++ ...
T Consensus 2 ~~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~---------------------~~~ 56 (394)
T 3okp_A 2 SASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD---------------------KTL 56 (394)
T ss_dssp --CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH---------------------TTC
T ss_pred CCCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc---------------------ccc
Confidence 5679999999998886 899999999999999 7999999998754321 1100 123
Q ss_pred CceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcc
Q 007212 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHT 240 (612)
Q Consensus 161 gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~ 240 (612)
|++++.+.....+. . ..+...+.+.++.. +||+ ||+|.+..
T Consensus 57 ~~~~~~~~~~~~~~--------------------~-----~~~~~~l~~~~~~~-------------~~Dv-v~~~~~~~ 97 (394)
T 3okp_A 57 DYEVIRWPRSVMLP--------------------T-----PTTAHAMAEIIRER-------------EIDN-VWFGAAAP 97 (394)
T ss_dssp SSEEEEESSSSCCS--------------------C-----HHHHHHHHHHHHHT-------------TCSE-EEESSCTT
T ss_pred ceEEEEcccccccc--------------------c-----hhhHHHHHHHHHhc-------------CCCE-EEECCcch
Confidence 45555553321111 0 02233444455544 4896 78886544
Q ss_pred c-chHHHHHhhhcCCCCcCCc-eEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhC
Q 007212 241 S-LIPCYLKTMYKPKGMYKSA-KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILES 318 (612)
Q Consensus 241 ~-~~~~~l~~~~~~~~~~~~~-pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~a 318 (612)
. ++...++. .++ ++|+++|+...... .......+++..++.+
T Consensus 98 ~~~~~~~~~~--------~~~~~~i~~~h~~~~~~~----------------------------~~~~~~~~~~~~~~~~ 141 (394)
T 3okp_A 98 LALMAGTAKQ--------AGASKVIASTHGHEVGWS----------------------------MLPGSRQSLRKIGTEV 141 (394)
T ss_dssp GGGGHHHHHH--------TTCSEEEEECCSTHHHHT----------------------------TSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHh--------cCCCcEEEEeccchhhhh----------------------------hcchhhHHHHHHHHhC
Confidence 3 33334333 255 48899996432000 0001234457788999
Q ss_pred CEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCC
Q 007212 319 DMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 319 d~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~ 398 (612)
|.++++|+..++.+.+. ++. ..++.+||||+|.+.|.|.. ...+..++++++++
T Consensus 142 d~ii~~s~~~~~~~~~~--~~~-------~~~~~vi~ngv~~~~~~~~~-----------------~~~~~~~~~~~~~~ 195 (394)
T 3okp_A 142 DVLTYISQYTLRRFKSA--FGS-------HPTFEHLPSGVDVKRFTPAT-----------------PEDKSATRKKLGFT 195 (394)
T ss_dssp SEEEESCHHHHHHHHHH--HCS-------SSEEEECCCCBCTTTSCCCC-----------------HHHHHHHHHHTTCC
T ss_pred CEEEEcCHHHHHHHHHh--cCC-------CCCeEEecCCcCHHHcCCCC-----------------chhhHHHHHhcCCC
Confidence 99999999999999862 221 12899999999999887732 22367789999997
Q ss_pred CCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH
Q 007212 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 399 ~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~ 476 (612)
.+ .++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+|+ ..+.++++.....+++.+.+..+.+++..+++
T Consensus 196 ~~--~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~ 271 (394)
T 3okp_A 196 DT--TPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNVKFLGRLEYQDMINTLA 271 (394)
T ss_dssp TT--CCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGEEEEESCCHHHHHHHHH
T ss_pred cC--ceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHH
Confidence 54 4899999999999999999999999866 699999999987 66777777755557799999988899999999
Q ss_pred hccEEEEcCCC-------CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 477 GADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 477 ~aDv~v~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
.||++|+||.+ |++|++++|||++|+|||+++.||..|++.++ +|+++ ++.|+++++++|.+
T Consensus 272 ~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~----------~~~d~~~l~~~i~~ 340 (394)
T 3okp_A 272 AADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVV----------EGSDVDKLSELLIE 340 (394)
T ss_dssp HCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEEC----------CTTCHHHHHHHHHH
T ss_pred hCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEe----------CCCCHHHHHHHHHH
Confidence 99999999999 99999999999999999999999999999999 99976 89999999999999
Q ss_pred HHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHHHcCCC
Q 007212 550 ALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGSE 593 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~~~~~~ 593 (612)
++++ ++.+.++++++ +.++|||+.++++|+++|+++....+.
T Consensus 341 l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~~~ 385 (394)
T 3okp_A 341 LLDD--PIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKLAA 385 (394)
T ss_dssp HHTC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC----
T ss_pred HHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCcch
Confidence 9998 67777777776 457799999999999999988755433
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=372.11 Aligned_cols=428 Identities=15% Similarity=0.169 Sum_probs=284.5
Q ss_pred CCceEEEEEeccc---------CccccccHHHHhhc--------hHHHHHhCCCeEE----EEEecCCccccccCccEEE
Q 007212 83 VGLNILFVGTEVA---------PWSKTGGLGDVLGG--------LPPALAANGHRVM----TIAPRYDQYKDAWDTDVVI 141 (612)
Q Consensus 83 ~~MkIl~v~~~~~---------P~~~~GG~~~~~~~--------L~~~L~~~Gh~V~----vit~~~~~~~~~~~~~~~~ 141 (612)
+.|+|++|+...+ |+ +||...|+.+ |+++|+++||+|+ |+|...+.. ...+.....
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~d--tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~-~g~~y~~~~ 353 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYPD--TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDA-VGTTCGERL 353 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTSTT--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTC-TTSSTTSSE
T ss_pred ceeEEEEEcCCcccCccccCCCCC--CCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCC-CCCccCCcc
Confidence 3699999999877 87 9999999984 7777788999886 998875432 111111111
Q ss_pred EEEeCCeeeEEEEEEeeecCceEEEEeCccc---cccccCCCCCcccCCCCCCCCchhhHHHHHHH-HHHHHHhhhhccC
Q 007212 142 ELKVGDKIEKVRFFHCHKRGVDRVFVDHPWF---LAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC-QAALEAPRILNLN 217 (612)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~---~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~-~~~~~~~~~l~~~ 217 (612)
+. ....+|++++++..... +.+ |- ....++ ... ..|. .++...++...
T Consensus 354 e~------------i~~~~gv~I~RvP~~~~~g~l~~-~l-~k~~L~---------~~L---~~F~~~~l~~il~~~~-- 405 (816)
T 3s28_A 354 ER------------VYDSEYCDILRVPFRTEKGIVRK-WI-SRFEVW---------PYL---ETYTEDAAVELSKELN-- 405 (816)
T ss_dssp EE------------CTTCSSEEEEEECEEETTEEECS-CC-CTTTCG---------GGH---HHHHHHHHHHHHHHCS--
T ss_pred ee------------ecCcCCeEEEEecCCCccccccc-cc-cHHHHH---------HHH---HHHHHHHHHHHHHhcC--
Confidence 00 01124777777743221 010 00 001111 111 1222 33334444432
Q ss_pred CCCccCCCCCCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCccccccccccc
Q 007212 218 SNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 297 (612)
Q Consensus 218 ~~~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 297 (612)
++||+ ||+|.|.+++++..++... ++|+|+|.|++....... .+..... + ..
T Consensus 406 ---------~~PDV-IHsH~~~sglva~llar~~-------gvP~V~T~Hsl~~~k~~~------~~~~~~~---~--~~ 457 (816)
T 3s28_A 406 ---------GKPDL-IIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTKYPD------SDIYWKK---L--DD 457 (816)
T ss_dssp ---------SCCSE-EEEEHHHHHHHHHHHHHHH-------TCCEEEECSCCHHHHSTT------TTTTHHH---H--HH
T ss_pred ---------CCCeE-EEeCCchHHHHHHHHHHHc-------CCCEEEEEeccccccccc------ccchhhh---H--HH
Confidence 35895 8999999988888887763 899999999765422110 0000000 0 00
Q ss_pred CCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCc-CCCcc----ch---------hhhhccCeEEeeCCccCCCc
Q 007212 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE----LD---------NIIRKTGIKGIVNGMDVQEW 363 (612)
Q Consensus 298 ~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~-~~G~~----~~---------~~~~~~~i~vI~ngvd~~~~ 363 (612)
.|. ....+...+..++.||.|+++|+..++.+.... .++.. .. +.+ ..++.+||||+|.+.|
T Consensus 458 ~y~---~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~-~~ki~VIpnGVD~~~F 533 (816)
T 3s28_A 458 KYH---FSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVF-DPKFNIVSPGADMSIY 533 (816)
T ss_dssp HHC---HHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTT-CTTEEECCCCCCTTTS
T ss_pred HHH---HHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccC-CCCEEEECCCcCHHHc
Confidence 000 001122345688999999999999998643210 11110 00 011 1289999999999999
Q ss_pred CCCcccc--cccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEe
Q 007212 364 NPLTDKY--IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG 439 (612)
Q Consensus 364 ~p~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG 439 (612)
.|...+. +...++ .......++...++.+|+..+++.++|+|+||+.+.||++.+++|++++.+ ++++|+|+|
T Consensus 534 ~P~~~~~~Rl~~~~~---~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG 610 (816)
T 3s28_A 534 FPYTEEKRRLTKFHS---EIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVG 610 (816)
T ss_dssp CCTTCTTTCCGGGHH---HHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEEC
T ss_pred Cccchhhhhhhhccc---cccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEe
Confidence 8865321 000000 000000011123455666445567999999999999999999999999976 689999999
Q ss_pred cCCh---------hHHHHHHHHHHHCC--CceEEEecc----ChHHHHHHHH-hccEEEEcCCCCCCcHHHHHHHHcCCc
Q 007212 440 TGKK---------PMEKQLEQLEILYP--EKARGVAKF----NIPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTV 503 (612)
Q Consensus 440 ~g~~---------~~~~~l~~l~~~~~--~~v~~~~~~----~~~~~~~i~~-~aDv~v~pS~~E~~gl~~lEAma~G~P 503 (612)
+|+. ...+.+++++.+++ +++.+.+.. +.+++..+++ +||++|+||.+|+||++++|||+||+|
T Consensus 611 ~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~P 690 (816)
T 3s28_A 611 GDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 690 (816)
T ss_dssp CCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCC
T ss_pred CCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCC
Confidence 9872 35667777777765 578887743 3356666777 689999999999999999999999999
Q ss_pred eEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHH----HhhCHHHHHHHHHHH---HHhhcCcHHH
Q 007212 504 PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL----ATYGTQALAEMMKNG---MAQDLSWKGP 576 (612)
Q Consensus 504 vI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll----~~~~~~~~~~~~~~~---~~~~fsw~~~ 576 (612)
||+|+.||+.|++.++.+|+++ ++.|+++++++|.+++ .+ ++.+.++++++ +.++|||+.+
T Consensus 691 VIasd~GG~~EiV~dg~~Gllv----------~p~D~e~LA~aI~~lL~~Ll~d--~~~~~~m~~~ar~~a~~~fSwe~~ 758 (816)
T 3s28_A 691 TFATCKGGPAEIIVHGKSGFHI----------DPYHGDQAADTLADFFTKCKED--PSHWDEISKGGLQRIEEKYTWQIY 758 (816)
T ss_dssp EEEESSBTHHHHCCBTTTBEEE----------CTTSHHHHHHHHHHHHHHHHHC--THHHHHHHHHHHHHHHHSCCHHHH
T ss_pred EEEeCCCChHHHHccCCcEEEe----------CCCCHHHHHHHHHHHHHHhccC--HHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999987 9999999999998777 66 66777787777 3588999999
Q ss_pred HHHHHHHHHHHH
Q 007212 577 AKKWEETLLNLE 588 (612)
Q Consensus 577 a~~~~~~y~~l~ 588 (612)
+++|+++|+...
T Consensus 759 a~~ll~lY~~~g 770 (816)
T 3s28_A 759 SQRLLTLTGVYG 770 (816)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999764
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=338.55 Aligned_cols=371 Identities=18% Similarity=0.190 Sum_probs=264.2
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
-|+.-+...+|++ .||.+.++..|+++|+++||+|+|+++..+.... ...+|+.
T Consensus 13 ~~~~~~~~~~~p~---~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-----------------------~~~~~i~ 66 (394)
T 2jjm_A 13 HMKLKIGITCYPS---VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN-----------------------KVYPNIY 66 (394)
T ss_dssp --CCEEEEECCC-----CHHHHHHHHHHHHHHHTTCEEEEECSSCC---------------------------CCCTTEE
T ss_pred hheeeeehhcCCC---CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc-----------------------ccCCceE
Confidence 3777777777644 7999999999999999999999999976321100 1122333
Q ss_pred EEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccch
Q 007212 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~ 243 (612)
+..+..+.+.. +. +. ...+ .+...+.+.++.. +||+ ||+|.+....+
T Consensus 67 ~~~~~~~~~~~----------~~------~~--~~~~-~~~~~l~~~l~~~-------------~~Dv-v~~~~~~~~~~ 113 (394)
T 2jjm_A 67 FHEVTVNQYSV----------FQ------YP--PYDL-ALASKMAEVAQRE-------------NLDI-LHVHYAIPHAI 113 (394)
T ss_dssp EECCCCC--------------CC------SC--CHHH-HHHHHHHHHHHHH-------------TCSE-EEECSSTTHHH
T ss_pred EEecccccccc----------cc------cc--cccH-HHHHHHHHHHHHc-------------CCCE-EEEcchhHHHH
Confidence 33332211100 00 00 0011 1233344445543 4895 89986554333
Q ss_pred HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEe
Q 007212 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~ 323 (612)
..++..... + .++|+|+++|+.... . .+. ......+++..++.+|.+++
T Consensus 114 ~~~~~~~~~--~--~~~p~v~~~h~~~~~-~--------~~~------------------~~~~~~~~~~~~~~ad~ii~ 162 (394)
T 2jjm_A 114 CAYLAKQMI--G--ERIKIVTTLHGTDIT-V--------LGS------------------DPSLNNLIRFGIEQSDVVTA 162 (394)
T ss_dssp HHHHHHHHT--T--TCSEEEEECCHHHHH-T--------TTT------------------CTTTHHHHHHHHHHSSEEEE
T ss_pred HHHHHHHhh--c--CCCCEEEEEecCccc-c--------cCC------------------CHHHHHHHHHHHhhCCEEEE
Confidence 333332211 0 268999999974320 0 000 00122456777899999999
Q ss_pred cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007212 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 403 (612)
+|+..++.+.+. ++. . .++.+||||+|.+.|.|.. +..++++++++.+ .
T Consensus 163 ~s~~~~~~~~~~--~~~-~------~~~~vi~ngv~~~~~~~~~--------------------~~~~~~~~~~~~~--~ 211 (394)
T 2jjm_A 163 VSHSLINETHEL--VKP-N------KDIQTVYNFIDERVYFKRD--------------------MTQLKKEYGISES--E 211 (394)
T ss_dssp SCHHHHHHHHHH--TCC-S------SCEEECCCCCCTTTCCCCC--------------------CHHHHHHTTCC-----
T ss_pred CCHHHHHHHHHh--hCC-c------ccEEEecCCccHHhcCCcc--------------------hHHHHHHcCCCCC--C
Confidence 999999998862 222 1 2899999999999887653 3456788888643 4
Q ss_pred cEEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
++|+|+||+.++||++.+++|++.+.+ .+++|+|+|+|+ ..+.++++..+++ +++.+.+. .+++..+++.||+
T Consensus 212 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~adv 287 (394)
T 2jjm_A 212 KILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGP--EFCTILQLVKNLHIEDRVLFLGK--QDNVAELLAMSDL 287 (394)
T ss_dssp CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCT--THHHHHHHHHTTTCGGGBCCCBS--CSCTHHHHHTCSE
T ss_pred eEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCch--HHHHHHHHHHHcCCCCeEEEeCc--hhhHHHHHHhCCE
Confidence 899999999999999999999999976 579999999987 5566777776654 45766663 3446689999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 560 (612)
+|+||.+|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++ ++.+.
T Consensus 288 ~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~----------~~~d~~~la~~i~~l~~~--~~~~~ 355 (394)
T 2jjm_A 288 MLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLC----------EVGDTTGVADQAIQLLKD--EELHR 355 (394)
T ss_dssp EEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEE----------CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred EEeccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEe----------CCCCHHHHHHHHHHHHcC--HHHHH
Confidence 999999999999999999999999999999999999999999987 899999999999999998 67777
Q ss_pred HHHHHH---HHhhcCcHHHHHHHHHHHHHHHHcC
Q 007212 561 EMMKNG---MAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 561 ~~~~~~---~~~~fsw~~~a~~~~~~y~~l~~~~ 591 (612)
++++++ +.+.|||+.++++|+++|++++...
T Consensus 356 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 356 NMGERARESVYEQFRSEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 777776 3489999999999999999998654
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-37 Score=330.84 Aligned_cols=364 Identities=14% Similarity=0.115 Sum_probs=256.9
Q ss_pred cCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeec
Q 007212 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
.|++|||++++.. +. .||.+.++..|+++|+++||+|++++...+..... .. ..+ .....
T Consensus 37 ~~~~mkIl~v~~~--~~--~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~--~~-----------~~~---~~~~~ 96 (416)
T 2x6q_A 37 KLKGRSFVHVNST--SF--GGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFN--VT-----------KTF---HNALQ 96 (416)
T ss_dssp TTTTCEEEEEESC--SS--SSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHH--HH-----------HHH---HHHHT
T ss_pred hhhccEEEEEeCC--CC--CCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhh--hh-----------ccc---ceeec
Confidence 3668999999986 33 79999999999999999999999998653210000 00 000 00000
Q ss_pred CceEEEEeCccccccccCCCCCcccCCCCCCCCchhhH-HHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCc
Q 007212 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL-RFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWH 239 (612)
Q Consensus 161 gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~-r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~ 239 (612)
++. .+ .+..... .+..+.....+.++.. +||+ ||+|++.
T Consensus 97 ~~~--------------------~~------~~~~~~~~~~~~~~~~~~~~l~~~-------------~~Dv-v~~~~~~ 136 (416)
T 2x6q_A 97 GNE--------------------SL------KLTEEMKELYLNVNRENSKFIDLS-------------SFDY-VLVHDPQ 136 (416)
T ss_dssp TCC--------------------SC------CCCHHHHHHHHHHHHHHHHSSCGG-------------GSSE-EEEESST
T ss_pred ccc--------------------cc------cccHHHHHHHHHHHHHHHHHHhhc-------------CCCE-EEEeccc
Confidence 000 00 0111111 1111222233333322 4895 8999876
Q ss_pred ccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCC
Q 007212 240 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 319 (612)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad 319 (612)
...+..+++ ..+|+|+++|+..... ......+++..+..+|
T Consensus 137 ~~~~~~~~~---------~~~p~v~~~h~~~~~~------------------------------~~~~~~~~~~~~~~~~ 177 (416)
T 2x6q_A 137 PAALIEFYE---------KKSPWLWRCHIDLSSP------------------------------NREFWEFLRRFVEKYD 177 (416)
T ss_dssp TGGGGGGSC---------CCSCEEEECCSCCSSC------------------------------CHHHHHHHHHHHTTSS
T ss_pred hhhHHHHHH---------hcCCEEEEEccccCCc------------------------------cHHHHHHHHHHHHhCC
Confidence 554432221 2489999999643210 0012344566677888
Q ss_pred EEE-ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCC
Q 007212 320 MVL-TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 320 ~vi-~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~ 398 (612)
.++ ++|+...+.+ . ..++.+||||+|...+.+... ....+..++++++++
T Consensus 178 ~~i~~~s~~~~~~~--------~------~~~~~vi~ngvd~~~~~~~~~---------------~~~~~~~~r~~~~~~ 228 (416)
T 2x6q_A 178 RYIFHLPEYVQPEL--------D------RNKAVIMPPSIDPLSEKNVEL---------------KQTEILRILERFDVD 228 (416)
T ss_dssp EEEESSGGGSCTTS--------C------TTTEEECCCCBCTTSTTTSCC---------------CHHHHHHHHHHTTCC
T ss_pred EEEEechHHHHhhC--------C------ccceEEeCCCCChhhhccccc---------------ChhhHHHHHHHhCCC
Confidence 876 5555433321 1 138999999999876654321 122356788899987
Q ss_pred CCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCC---hhHHHHHHHHHHHCC--CceEEEeccC---h
Q 007212 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK---KPMEKQLEQLEILYP--EKARGVAKFN---I 468 (612)
Q Consensus 399 ~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~---~~~~~~l~~l~~~~~--~~v~~~~~~~---~ 468 (612)
.+ .++|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+ +...+.++++..+++ +++.+.+.++ .
T Consensus 229 ~~--~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~ 306 (416)
T 2x6q_A 229 PE--KPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHA 306 (416)
T ss_dssp TT--SCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCH
T ss_pred CC--CcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCH
Confidence 54 4899999999999999999999999965 699999999986 234556666665543 5788887553 5
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHH
Q 007212 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~ 548 (612)
+++..+++.||++|+||.+|+||++++|||+||+|||+++.||+.|++.++.+|+++ + |+++++++|.
T Consensus 307 ~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~----------~--d~~~la~~i~ 374 (416)
T 2x6q_A 307 REVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLV----------R--DANEAVEVVL 374 (416)
T ss_dssp HHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEE----------S--SHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEE----------C--CHHHHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999986 5 9999999999
Q ss_pred HHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHH
Q 007212 549 RALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 549 ~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+++++ ++.+.++++++ +.++|||+.++++|+++|++++
T Consensus 375 ~ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 375 YLLKH--PEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHHHC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred HHHhC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 99998 67777777776 3578999999999999999765
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=333.23 Aligned_cols=365 Identities=18% Similarity=0.190 Sum_probs=263.5
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecC
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
.++|||+|++..++|. .||.+.++..|+++|+++||+|+++++...... +..... ..|
T Consensus 18 ~~~MkIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--~~~~~~------------------~~~ 75 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDV--PGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVK--LPDYVV------------------SGG 75 (406)
T ss_dssp ---CEEEEECSSCTTS--CCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSC--CCTTEE------------------ECC
T ss_pred CCcceEEEEeccCCCC--CCcHHHHHHHHHHHHHHCCCeEEEEecCCcccc--CCcccc------------------cCC
Confidence 3469999999876664 699999999999999999999999998744220 000000 001
Q ss_pred ceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc
Q 007212 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~ 241 (612)
+++.+....... .+. +.. .+...+.+.++.. +||+ ||+|.+...
T Consensus 76 -~~~~~~~~~~~~--------~~~-------~~~------~~~~~l~~~l~~~-------------~~Di-i~~~~~~~~ 119 (406)
T 2gek_A 76 -KAVPIPYNGSVA--------RLR-------FGP------ATHRKVKKWIAEG-------------DFDV-LHIHEPNAP 119 (406)
T ss_dssp -CCC---------------------------CCH------HHHHHHHHHHHHH-------------CCSE-EEEECCCSS
T ss_pred -cEEeccccCCcc--------ccc-------ccH------HHHHHHHHHHHhc-------------CCCE-EEECCccch
Confidence 111110000000 000 000 1223344444443 3795 888876666
Q ss_pred chHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEE
Q 007212 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~v 321 (612)
.+...+... .++|+|+++|+...... ... ....+++..++.+|.+
T Consensus 120 ~~~~~~~~~-------~~~~~i~~~h~~~~~~~--------------~~~--------------~~~~~~~~~~~~~d~i 164 (406)
T 2gek_A 120 SLSMLALQA-------AEGPIVATFHTSTTKSL--------------TLS--------------VFQGILRPYHEKIIGR 164 (406)
T ss_dssp SHHHHHHHH-------EESSEEEEECCCCCSHH--------------HHH--------------HHHSTTHHHHTTCSEE
T ss_pred HHHHHHHHh-------cCCCEEEEEcCcchhhh--------------hHH--------------HHHHHHHHHHhhCCEE
Confidence 554444443 37899999997432110 000 0111223567899999
Q ss_pred EecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007212 322 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 401 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~ 401 (612)
+++|+..++.+.+. ++. .++ +||||+|...|.+.... .+++.
T Consensus 165 i~~s~~~~~~~~~~--~~~--------~~~-vi~~~v~~~~~~~~~~~-------------------------~~~~~-- 206 (406)
T 2gek_A 165 IAVSDLARRWQMEA--LGS--------DAV-EIPNGVDVASFADAPLL-------------------------DGYPR-- 206 (406)
T ss_dssp EESSHHHHHHHHHH--HSS--------CEE-ECCCCBCHHHHHTCCCC-------------------------TTCSC--
T ss_pred EECCHHHHHHHHHh--cCC--------CcE-EecCCCChhhcCCCchh-------------------------hhccC--
Confidence 99999999988752 222 278 99999998777554310 11221
Q ss_pred CCcEEEEEccC-ccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 402 NIPVIGFIGRL-EEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~i~~iGrl-~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
+.++|+|+||+ .+.||++.+++|++.+.+ ++++|+|+|.|+. +.++++..++.+++.+.+..+.+++..+|+.|
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~---~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 283 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE---DELREQAGDLAGHLRFLGQVDDATKASAMRSA 283 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH---HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHS
T ss_pred CCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH---HHHHHHHHhccCcEEEEecCCHHHHHHHHHHC
Confidence 34799999999 999999999999999976 6899999999983 66666666555678888888888888999999
Q ss_pred cEEEEcCC-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHH
Q 007212 479 DFILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 557 (612)
Q Consensus 479 Dv~v~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 557 (612)
|++|+||. .|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++ ++
T Consensus 284 dv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~ 351 (406)
T 2gek_A 284 DVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLV----------PVDDADGMAAALIGILED--DQ 351 (406)
T ss_dssp SEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEEC----------CTTCHHHHHHHHHHHHHC--HH
T ss_pred CEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHcC--HH
Confidence 99999996 899999999999999999999999999999999999976 899999999999999998 66
Q ss_pred HHHHHHHHHH--HhhcCcHHHHHHHHHHHHHHHHcCC
Q 007212 558 ALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAGS 592 (612)
Q Consensus 558 ~~~~~~~~~~--~~~fsw~~~a~~~~~~y~~l~~~~~ 592 (612)
.+.++++++. .+.|||+..+++|+++|++++....
T Consensus 352 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 388 (406)
T 2gek_A 352 LRAGYVARASERVHRYDWSVVSAQIMRVYETVSGAGI 388 (406)
T ss_dssp HHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcc
Confidence 7777777662 3489999999999999999986543
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-38 Score=332.21 Aligned_cols=362 Identities=15% Similarity=0.168 Sum_probs=258.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++..++| .||.+.++.+|+++|+++||+|+|+++..... ...|+++
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--------------------------~~~~~~v 51 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGD--------------------------CPKAFEL 51 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSC--------------------------CCTTCEE
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCC--------------------------CCCCcEE
Confidence 899999998877 59999999999999999999999999763210 0135666
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
+.+..+.+. +..++..+...+.+.++.. +||+ ||+|.+..+...
T Consensus 52 ~~~~~~~~~----------------------~~~~~~~~~~~l~~~i~~~-------------~~Dv-v~~~~~~~~~~~ 95 (374)
T 2iw1_A 52 IQVPVKSHT----------------------NHGRNAEYYAWVQNHLKEH-------------PADR-VVGFNKMPGLDV 95 (374)
T ss_dssp EECCCCCSS----------------------HHHHHHHHHHHHHHHHHHS-------------CCSE-EEESSCCTTCSE
T ss_pred EEEccCccc----------------------chhhHHHHHHHHHHHHhcc-------------CCCE-EEEecCCCCcee
Confidence 555322111 1122223334444455443 4895 888875443321
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHh--hCCEEE
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL--ESDMVL 322 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~--~ad~vi 322 (612)
.+.... ...+.+.+.|+.... ..... .....+.+..+. .+|.++
T Consensus 96 ~~~~~~-------~~~~~~~~~~~~~~~------------~~~~~---------------~~~~~~~~~~~~~~~~d~ii 141 (374)
T 2iw1_A 96 YFAADV-------CYAEKVAQEKGFLYR------------LTSRY---------------RHYAAFERATFEQGKSTKLM 141 (374)
T ss_dssp EECCSC-------CHHHHHHHHCCHHHH------------TSHHH---------------HHHHHHHHHHHSTTCCCEEE
T ss_pred eecccc-------ccceeeeecccchhh------------hcHHH---------------HHHHHHHHHHhhccCCcEEE
Confidence 111100 122333333321100 00000 001112233333 699999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
++|+..++.+.+. +|++.+ ++.+||||+|.+.|.|... ...+..+++++|++.+
T Consensus 142 ~~s~~~~~~~~~~--~~~~~~------~~~vi~ngv~~~~~~~~~~----------------~~~~~~~~~~~~~~~~-- 195 (374)
T 2iw1_A 142 MLTDKQIADFQKH--YQTEPE------RFQILPPGIYPDRKYSEQI----------------PNSREIYRQKNGIKEQ-- 195 (374)
T ss_dssp ESCHHHHHHHHHH--HCCCGG------GEEECCCCCCGGGSGGGSC----------------TTHHHHHHHHTTCCTT--
T ss_pred EcCHHHHHHHHHH--hCCChh------heEEecCCcCHHhcCcccc----------------hhHHHHHHHHhCCCCC--
Confidence 9999999998852 455544 8999999999988866432 1225678899998754
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhccc---CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHh
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~ 477 (612)
.++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+|+. +.++++..+++ +++.+.+. .+++..+++.
T Consensus 196 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ 270 (374)
T 2iw1_A 196 QNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP---RKFEALAEKLGVRSNVHFFSG--RNDVSELMAA 270 (374)
T ss_dssp CEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHH
T ss_pred CeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---HHHHHHHHHcCCCCcEEECCC--cccHHHHHHh
Confidence 4899999999999999999999999965 4899999999873 34555554433 46887775 3456689999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCC-CCCHHHHHHHHHHHHHhhCH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD-PVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~-~~d~~~la~~i~~ll~~~~~ 556 (612)
||++|+||.+|+||++++|||+||+|||+++.||..|++.++.+|+++ + +.|+++++++|.+++++ +
T Consensus 271 ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~l~~~i~~l~~~--~ 338 (374)
T 2iw1_A 271 ADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI----------AEPFSQEQLNEVLRKALTQ--S 338 (374)
T ss_dssp CSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE----------CSSCCHHHHHHHHHHHHHC--H
T ss_pred cCEEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEe----------CCCCCHHHHHHHHHHHHcC--h
Confidence 999999999999999999999999999999999999999999999986 6 88999999999999998 7
Q ss_pred HHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHH
Q 007212 557 QALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 557 ~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+.+.++++++ ..++++|+..++++.++++..+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 339 PLRMAWAENARHYADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 7788888877 3567899999999999998654
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=330.39 Aligned_cols=232 Identities=15% Similarity=0.116 Sum_probs=196.2
Q ss_pred HHHHhhCC--EEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 312 KAGILESD--MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 312 k~~l~~ad--~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+..++.+| .++++|+..++.+.+ +|.+ + ++.+||||+|.+.|.
T Consensus 126 ~~~~~~~~~~~ii~~S~~~~~~~~~---~~~~-~------~~~vi~ngvd~~~~~------------------------- 170 (413)
T 3oy2_A 126 WWIFSHPKVVGVMAMSKCWISDICN---YGCK-V------PINIVSHFVDTKTIY------------------------- 170 (413)
T ss_dssp GGGGGCTTEEEEEESSTHHHHHHHH---TTCC-S------CEEECCCCCCCCCCT-------------------------
T ss_pred HHHHhccCCceEEEcCHHHHHHHHH---cCCC-C------ceEEeCCCCCHHHHH-------------------------
Confidence 44577888 999999999999987 5542 2 899999999988771
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChh----HHHHHHHHHHHCC--Cc--
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EK-- 459 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~-- 459 (612)
..+++++++.+.+.++|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+.. +++.+++++.+++ ++
T Consensus 171 ~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~ 250 (413)
T 3oy2_A 171 DARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFT 250 (413)
T ss_dssp THHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHH
T ss_pred HHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccc
Confidence 23667788753356899999999999999999999999865 78999999998743 4577777776654 33
Q ss_pred -----eEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcc-------------
Q 007212 460 -----ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT------------- 521 (612)
Q Consensus 460 -----v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~------------- 521 (612)
+.+.+..+.+++..+|+.||++|+||.+|+||++++|||+||+|||+|+.||+.|++.++.+
T Consensus 251 ~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~ 330 (413)
T 3oy2_A 251 HLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDD 330 (413)
T ss_dssp HHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTT
T ss_pred cccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCccccccccccccccc
Confidence 55556678888999999999999999999999999999999999999999999999999887
Q ss_pred --eE--EecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH---HhhcCcHHHHHHHHHHHHHHHHcC
Q 007212 522 --GF--QMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 522 --G~--~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~y~~l~~~~ 591 (612)
|+ ++ ++.|+++|+++| +++++ ++.+.++++++. .++|||+.++++|+++|++++.+.
T Consensus 331 ~~G~~gl~----------~~~d~~~la~~i-~l~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 331 RDGIGGIE----------GIIDVDDLVEAF-TFFKD--EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp TCSSCCEE----------EECCHHHHHHHH-HHTTS--HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred ccCcceee----------CCCCHHHHHHHH-HHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 88 87 889999999999 99998 777778877774 478999999999999999998654
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=324.04 Aligned_cols=316 Identities=15% Similarity=0.116 Sum_probs=245.2
Q ss_pred CCCceEEEEEec--------c---cCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeee
Q 007212 82 GVGLNILFVGTE--------V---APWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIE 150 (612)
Q Consensus 82 ~~~MkIl~v~~~--------~---~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (612)
|++|||++++.. + +| ...||.+.++..|+++|+++||+|+++++.......
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~----------------- 62 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR----------------- 62 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS-----------------
T ss_pred CCccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC-----------------
Confidence 557999999998 3 44 246999999999999999999999999987332110
Q ss_pred EEEEEEeeecCceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCc
Q 007212 151 KVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKN 230 (612)
Q Consensus 151 ~~~~~~~~~~gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pD 230 (612)
++++++.. + .. ..+.+.++.. +||
T Consensus 63 ---------~~~~~~~~--~-------------------------~~-------~~l~~~l~~~-------------~~D 86 (342)
T 2iuy_A 63 ---------PGLTVVPA--G-------------------------EP-------EEIERWLRTA-------------DVD 86 (342)
T ss_dssp ---------TTEEECSC--C-------------------------SH-------HHHHHHHHHC-------------CCS
T ss_pred ---------CcceeccC--C-------------------------cH-------HHHHHHHHhc-------------CCC
Confidence 12221100 0 00 0223334433 489
Q ss_pred EEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHH
Q 007212 231 VVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW 310 (612)
Q Consensus 231 vVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (612)
+ ||+|.+...... .. ..++| |+++|+..... .
T Consensus 87 v-i~~~~~~~~~~~---~~-------~~~~p-v~~~h~~~~~~--------------------------------~---- 118 (342)
T 2iuy_A 87 V-VHDHSGGVIGPA---GL-------PPGTA-FISSHHFTTRP--------------------------------V---- 118 (342)
T ss_dssp E-EEECSSSSSCST---TC-------CTTCE-EEEEECSSSBC--------------------------------S----
T ss_pred E-EEECCchhhHHH---Hh-------hcCCC-EEEecCCCCCc--------------------------------c----
Confidence 5 899986655432 11 14889 99999754310 0
Q ss_pred HHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHH
Q 007212 311 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 311 ~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (612)
.+|.++++|+..++.+.+ ..++.+||||+|.+.|.+...
T Consensus 119 ------~~d~ii~~S~~~~~~~~~-------------~~~~~vi~ngvd~~~~~~~~~---------------------- 157 (342)
T 2iuy_A 119 ------NPVGCTYSSRAQRAHCGG-------------GDDAPVIPIPVDPARYRSAAD---------------------- 157 (342)
T ss_dssp ------CCTTEEESCHHHHHHTTC-------------CTTSCBCCCCBCGGGSCCSTT----------------------
T ss_pred ------cceEEEEcCHHHHHHHhc-------------CCceEEEcCCCChhhcCcccc----------------------
Confidence 189999999999998874 128999999999988876531
Q ss_pred HHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHH
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 470 (612)
.. .+.++|+|+||+.+.||++.+++|++.+ +++|+|+|+|+ ..+.++++..++++++.+.+..+.++
T Consensus 158 -----~~---~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~ 224 (342)
T 2iuy_A 158 -----QV---AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAW--EPEYFDEITRRYGSTVEPIGEVGGER 224 (342)
T ss_dssp -----CC---CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCC--CHHHHHHHHHHHTTTEEECCCCCHHH
T ss_pred -----cC---CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCcc--cHHHHHHHHHHhCCCEEEeccCCHHH
Confidence 11 1346899999999999999999999998 89999999987 56667777766667899988888888
Q ss_pred HHHHHHhccEEEEcCC----------CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CcceEEecccccccccCCCC
Q 007212 471 AHMIIAGADFILIPSR----------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~----------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~~~~~~~~v~~~ 538 (612)
+..+++.||++|+||. .|+||++++|||+||+|||+++.||+.|++.+ +.+|+++ ++
T Consensus 225 l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~----------~~- 293 (342)
T 2iuy_A 225 RLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGT----------DF- 293 (342)
T ss_dssp HHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSS----------CC-
T ss_pred HHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEc----------CC-
Confidence 8899999999999999 79999999999999999999999999999999 8999965 88
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHcC
Q 007212 539 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 539 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~~ 591 (612)
|+++++++|.++++ .+.+++.+.++|||+.++++|+++|++++.+.
T Consensus 294 d~~~l~~~i~~l~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 294 APDEARRTLAGLPA-------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA 339 (342)
T ss_dssp CHHHHHHHHHTSCC-------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHH-------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence 99999999998876 23334445688999999999999999998654
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-36 Score=328.51 Aligned_cols=441 Identities=17% Similarity=0.178 Sum_probs=289.9
Q ss_pred EEecccCccccccHHHHhhchHHHHHhC-CCeEEEEEecCCcccc----ccCc-cEE--------EEE---EeCCeeeEE
Q 007212 90 VGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQYKD----AWDT-DVV--------IEL---KVGDKIEKV 152 (612)
Q Consensus 90 v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~~~~~~~----~~~~-~~~--------~~~---~~~~~~~~~ 152 (612)
++.|+.- +.||+-+|+..=|+.+.+. |-+...|.|....... .++. ... +.. ....+.-.+
T Consensus 33 ~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 110 (725)
T 3nb0_A 33 TATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQTMESRGVHF 110 (725)
T ss_dssp EETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHHHHHTTTCCE
T ss_pred eehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcCCcceeecCCCCchhhcchhHHHHHHHHHHHHCCCeE
Confidence 4555543 6999999999999888875 8889999985321111 0000 000 000 001112345
Q ss_pred EEEEeeecCceEEE-EeCcccccc-------ccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCC
Q 007212 153 RFFHCHKRGVDRVF-VDHPWFLAK-------VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSG 224 (612)
Q Consensus 153 ~~~~~~~~gv~~~~-v~~~~~~~~-------~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~ 224 (612)
++-+..++|.+++. +|...++.+ .|-..|-. .+. +..+.+...+|.+++.++++.+..+..
T Consensus 111 ~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~i~--s~~-~yg~~dd~~~F~y~~~avl~~l~~~~~-------- 179 (725)
T 3nb0_A 111 VYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVGIP--SPE-NDFETNDAILLGYTVAWFLGEVAHLDS-------- 179 (725)
T ss_dssp EEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHCCC--CCS-SCHHHHHHHHHHHHHHHHHHHHHHHCC--------
T ss_pred EEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhCcC--CCC-cccchhHHHHHHHHHHHHHHHHHhcCC--------
Confidence 66677788887764 466555432 45221110 111 112445678899999999998877641
Q ss_pred CCCCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCc------ccccCc-ccccccCCCccccccccccc
Q 007212 225 PYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAY------QGRFAF-EDFGLLNLPAQFKSSFDFID 297 (612)
Q Consensus 225 ~~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~------~~~~~~-~~~~~~~l~~~~~~~~~~~~ 297 (612)
..|| |+|+|||++++++.+++..+ .++|+|||+|++.+ ||.++. ..+...+++.....
T Consensus 180 --~~pd-IiH~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~------ 244 (725)
T 3nb0_A 180 --QHAI-VAHFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGR------ 244 (725)
T ss_dssp --SEEE-EEEEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHH------
T ss_pred --CCCc-EEEeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhh------
Confidence 1378 59999999999999999764 59999999999853 343321 11222222211100
Q ss_pred CCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCc
Q 007212 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 377 (612)
Q Consensus 298 ~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~ 377 (612)
.-.....+++|.++..||.|+|||+.+++++... ++...+ . +||||+|+..|+|...
T Consensus 245 ----~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~L--l~r~~d------~--iIpNGID~~~f~p~~~--------- 301 (725)
T 3nb0_A 245 ----FGIYHRYCIERAAAHSADVFTTVSQITAFEAEHL--LKRKPD------G--ILPNGLNVIKFQAFHE--------- 301 (725)
T ss_dssp ----TTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHHH--TSSCCS------E--ECCCCBCCCCCSSTTH---------
T ss_pred ----hchhHHHHHHHHHHHhCCEEEECCHHHHHHHHHH--hcCCCC------E--EEcCCccccccCcchh---------
Confidence 0012357889999999999999999999999962 343332 3 3999999999988521
Q ss_pred chhhhccHHHHHHHHHHh------CCCCC-CCCcEEEEEccCc-cccCHHHHHHHHHhccc---------CCeEEEEEec
Q 007212 378 STVMDAKPLLKEALQAEV------GLPVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK---------ENVQIIVLGT 440 (612)
Q Consensus 378 ~~~~~~~~~~~~~l~~~~------gl~~~-~~~~~i~~iGrl~-~~Kg~d~li~A~~~l~~---------~~~~lvivG~ 440 (612)
....+...|..+++.+ +++.+ ++.++|+.+||++ ++||+|.+++|+.+|.. .-+.|+|+..
T Consensus 302 --~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~ 379 (725)
T 3nb0_A 302 --FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPA 379 (725)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCC
T ss_pred --hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCC
Confidence 1133445556665544 34433 2445666689999 79999999999999863 1366777766
Q ss_pred CChh--------------HHHH----------------------------------------------------------
Q 007212 441 GKKP--------------MEKQ---------------------------------------------------------- 448 (612)
Q Consensus 441 g~~~--------------~~~~---------------------------------------------------------- 448 (612)
+... +.+.
T Consensus 380 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~l 459 (725)
T 3nb0_A 380 KNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQL 459 (725)
T ss_dssp CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCC
T ss_pred CCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCC
Confidence 5211 0000
Q ss_pred -------------------HHHHHHHC----CCceEEEeccChH-------HHHHHHHhccEEEEcCCCCCCcHHHHHHH
Q 007212 449 -------------------LEQLEILY----PEKARGVAKFNIP-------LAHMIIAGADFILIPSRFEPCGLIQLHAM 498 (612)
Q Consensus 449 -------------------l~~l~~~~----~~~v~~~~~~~~~-------~~~~i~~~aDv~v~pS~~E~~gl~~lEAm 498 (612)
++++.... ..++.+++.|... ....++++||++|+||.+|+||++++|||
T Consensus 460 pp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAm 539 (725)
T 3nb0_A 460 PPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECT 539 (725)
T ss_dssp CCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHH
T ss_pred CCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHH
Confidence 01111000 0135666666322 35679999999999999999999999999
Q ss_pred HcCCceEEcCCCCcccceecC-------cceEEecccccccccCCCCCHHHHHHHHHHHHHhh---CHHHHHHHHHHH--
Q 007212 499 RYGTVPIVASTGGLVDTVEEG-------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY---GTQALAEMMKNG-- 566 (612)
Q Consensus 499 a~G~PvI~s~~gg~~e~v~~g-------~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~---~~~~~~~~~~~~-- 566 (612)
|||+|||+|++||+.|+|.++ .+|+++... ++.|+++++++|.+++... .+..+.++++++
T Consensus 540 A~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~r-------d~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~ 612 (725)
T 3nb0_A 540 VMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDR-------RFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEA 612 (725)
T ss_dssp HTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECC-------SSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HcCCCEEEeCCCChhhhhhccccccCCCCceEEEeCC-------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999999875 369875111 3567777777777776531 255666777766
Q ss_pred HHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 567 MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 567 ~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++++|||+.++++|+++|+.++..
T Consensus 613 ~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 613 LSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp GGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhh
Confidence 568999999999999999998854
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-32 Score=296.84 Aligned_cols=357 Identities=12% Similarity=0.102 Sum_probs=229.2
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecC
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
..+|||++++..|.|....||.. .+.+|+++|+++||+|+|+++......... ....+
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~~~~~~---------------------~~~~~ 101 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATPNPKDL---------------------QSFKS 101 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCCCHHHH---------------------GGGTT
T ss_pred CCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCCChHHH---------------------Hhhhc
Confidence 56899999999998842347765 688999999999999999998732100000 00001
Q ss_pred ceEEEEeCc-cccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcc
Q 007212 162 VDRVFVDHP-WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHT 240 (612)
Q Consensus 162 v~~~~v~~~-~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~ 240 (612)
.....+... .+..+ +.. +.. . ....+.. .+||+ +|+|.|.+
T Consensus 102 ~~~~~~~~~~~~~~~--------i~~------~~~----------~---~~~~~~~----------~~~Dv-v~a~~~~~ 143 (413)
T 2x0d_A 102 FKYVMPEEDKDFALQ--------IVP------FND----------R---YNRTIPV----------AKHDI-FIATAWWT 143 (413)
T ss_dssp SEECCTTCCCCCSEE--------EEE------CSC----------C---TTCCEEE----------CTTEE-EEECSHHH
T ss_pred cceeeccCCccccce--------eee------ccc----------c---ccccccC----------CCCCE-EEEehHHH
Confidence 000000000 00000 000 000 0 0000000 24795 89998877
Q ss_pred cchHHHHHhhh-cCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCC
Q 007212 241 SLIPCYLKTMY-KPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 319 (612)
Q Consensus 241 ~~~~~~l~~~~-~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad 319 (612)
+.....+.... ...+ ....|.++.+|+.... +. + +.....+.+..+..++
T Consensus 144 ~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~--~~-------------------------~-~~~~~~~~~~~~~~~~ 194 (413)
T 2x0d_A 144 AYAAQRIVSWQSDTYG-IPPNKILYIIQDFEPG--FY-------------------------Q-WSSQYVLAESTYKYRG 194 (413)
T ss_dssp HHHHHHHHHHHHHHHT-CCCCCEEEEECSCGGG--GS-------------------------C-SSHHHHHHHHTTSCCS
T ss_pred HHHHHHhhhhhhhhcc-cccCcEEEEEeechhh--cC-------------------------c-cChHHHHHHHHhccCC
Confidence 66554442110 0000 0255778778764320 00 0 0011122344555555
Q ss_pred --EEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCC
Q 007212 320 --MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 320 --~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl 397 (612)
.++++|+..++.+.+ +|.+.. ++.+|+||+|.+.|.+.. .+.
T Consensus 195 ~~~vi~~S~~~~~~l~~---~g~~~~------~~~~i~~g~d~~~~~~~~---------------------------~~~ 238 (413)
T 2x0d_A 195 PQIAVFNSELLKQYFNN---KGYNFT------DEYFFQPKINTTLKNYIN---------------------------DKR 238 (413)
T ss_dssp CEEEEEESHHHHHHHHH---HTCCCS------EEEEECCCCCHHHHTTTT---------------------------SCC
T ss_pred ceEEEEcCHHHHHHHHH---cCCCCC------ceEEeCCCcCchhhcccc---------------------------ccc
Confidence 589999999999986 344322 688999999976543311 011
Q ss_pred CCCCCCcEEEEEccC-ccccCHHHHHHHHHhccc--C---CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007212 398 PVDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK--E---NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 398 ~~~~~~~~i~~iGrl-~~~Kg~d~li~A~~~l~~--~---~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 471 (612)
++.+.|+++||+ .+.||++.+++|++.+.+ + +++|+|+|+|+... ++ ...+++.+.+..+.+++
T Consensus 239 ---~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~-----~l--~~~~~v~f~G~~~~~~l 308 (413)
T 2x0d_A 239 ---QKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDI-----AL--GKGIHLNSLGKLTLEDY 308 (413)
T ss_dssp ---CCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCE-----EE--ETTEEEEEEESCCHHHH
T ss_pred ---CCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhh-----hc--CCcCcEEEcCCCCHHHH
Confidence 134688999997 689999999999999865 4 38999999987321 11 12346888888889999
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
..+|+.||++++||..|+||++++||||||+|||++ .+|..|++.++.+|+++ ++.|+++|+++|.+++
T Consensus 309 ~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv----------~~~d~~~la~ai~~ll 377 (413)
T 2x0d_A 309 ADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSL----------EQLNPENIAETLVELC 377 (413)
T ss_dssp HHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEE----------SSCSHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEe----------CCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999995 46778999999999976 9999999999999999
Q ss_pred HhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+++. .+.+ ......+.|||+..+++ .+.|+++.
T Consensus 378 ~~~~--~~~~-~~~~~~~~~~W~~~~~~-~~~~~~l~ 410 (413)
T 2x0d_A 378 MSFN--NRDV-DKKESSNMMFYINEFNE-FSFIKEIE 410 (413)
T ss_dssp HHTC----------CCBSCGGGCCCC----TTHHHHH
T ss_pred cCHH--HHHH-hHHHHHHhCCHHHHHHH-HHHHHHHH
Confidence 9843 3333 21223568999999887 66677665
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-30 Score=274.41 Aligned_cols=202 Identities=15% Similarity=0.119 Sum_probs=164.1
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+++..++.+|.++++|+..++.+.+ .| ++.+||||+|.+.|.|...
T Consensus 170 ~~~~~~~~~ad~vi~~S~~~~~~~~~---~~----------~i~vipngvd~~~f~~~~~-------------------- 216 (406)
T 2hy7_A 170 REFDRVAPTLDVIALVSPAMAAEVVS---RD----------NVFHVGHGVDHNLDQLGDP-------------------- 216 (406)
T ss_dssp HHHHHHGGGCSEEEESCGGGGGGCSC---ST----------TEEECCCCBCTTHHHHHCS--------------------
T ss_pred HHHHHHHHhCCEEEEcCHHHHHHHHh---cC----------CEEEEcCCcChHhcCcccc--------------------
Confidence 45677889999999999999888764 22 7899999999887754321
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccCh
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 468 (612)
.+ .++.++|+|+||+.+.||+ ++++.+. .++++|+|+|+|+ ++++ ...++|.+.+..+.
T Consensus 217 --------~~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~------~~~~--~l~~~V~f~G~~~~ 275 (406)
T 2hy7_A 217 --------SP-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM------GRHP--GYGDNVIVYGEMKH 275 (406)
T ss_dssp --------CS-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS------CCCT--TCCTTEEEECCCCH
T ss_pred --------cc-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch------HHhc--CCCCCEEEcCCCCH
Confidence 01 1233799999999999999 4444332 3789999999986 1111 23467999998888
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHH-------HcCCceEEcCCCCcccceecCcceEE-ecccccccccCCCCCH
Q 007212 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAM-------RYGTVPIVASTGGLVDTVEEGFTGFQ-MGSFSVDCEAVDPVDV 540 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~gl~~lEAm-------a~G~PvI~s~~gg~~e~v~~g~~G~~-~~~~~~~~~~v~~~d~ 540 (612)
+++..+|+.||++|+||..|+||++++||| +||+|||+|+. +.++.+|++ + +++|+
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v----------~~~d~ 339 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGY----------TPGNA 339 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEE----------CTTCH
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEe----------CCCCH
Confidence 888999999999999999999999999999 99999999997 667789997 6 99999
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHH--HHHHHH
Q 007212 541 AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET--LLNLEV 589 (612)
Q Consensus 541 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~--y~~l~~ 589 (612)
++|+++|.++++++. . ...+.|||+.++++++++ |+++..
T Consensus 340 ~~la~ai~~ll~~~~---~------~~~~~~sw~~~a~~~~~~~~y~~~~~ 381 (406)
T 2hy7_A 340 DSVIAAITQALEAPR---V------RYRQCLNWSDTTDRVLDPRAYPETRL 381 (406)
T ss_dssp HHHHHHHHHHHHCCC---C------CCSCCCBHHHHHHHHHCGGGSGGGBS
T ss_pred HHHHHHHHHHHhCcc---h------hhhhcCCHHHHHHHHHHhhcccccCc
Confidence 999999999999854 1 235789999999999999 887664
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-29 Score=261.90 Aligned_cols=339 Identities=15% Similarity=0.026 Sum_probs=227.3
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
.|||++++. + .||....+..|+++|+++||+|+++++......+.. ...|++
T Consensus 6 ~mkIl~~~~---~---~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----------------------~~~g~~ 57 (364)
T 1f0k_A 6 GKRLMVMAG---G---TGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLV----------------------PKHGIE 57 (364)
T ss_dssp -CEEEEECC---S---SHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHG----------------------GGGTCE
T ss_pred CcEEEEEeC---C---CccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhc----------------------cccCCc
Confidence 489999973 2 588888899999999999999999998632111100 112455
Q ss_pred EEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccch
Q 007212 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~ 243 (612)
++.+..+.+... .... ......++......+.+.++.. +||+ ||+|.....+.
T Consensus 58 ~~~~~~~~~~~~-------~~~~------~~~~~~~~~~~~~~l~~~l~~~-------------~pDv-v~~~~~~~~~~ 110 (364)
T 1f0k_A 58 IDFIRISGLRGK-------GIKA------LIAAPLRIFNAWRQARAIMKAY-------------KPDV-VLGMGGYVSGP 110 (364)
T ss_dssp EEECCCCCCTTC-------CHHH------HHTCHHHHHHHHHHHHHHHHHH-------------CCSE-EEECSSTTHHH
T ss_pred eEEecCCccCcC-------ccHH------HHHHHHHHHHHHHHHHHHHHhc-------------CCCE-EEEeCCcCchH
Confidence 554432211000 0000 0000111112233344444443 4895 78875443333
Q ss_pred HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEe
Q 007212 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~ 323 (612)
...+... .++|++++.|+... + ...+...+.+|.+++
T Consensus 111 ~~~~~~~-------~~~p~v~~~~~~~~-~-----------------------------------~~~~~~~~~~d~v~~ 147 (364)
T 1f0k_A 111 GGLAAWS-------LGIPVVLHEQNGIA-G-----------------------------------LTNKWLAKIATKVMQ 147 (364)
T ss_dssp HHHHHHH-------TTCCEEEEECSSSC-C-----------------------------------HHHHHHTTTCSEEEE
T ss_pred HHHHHHH-------cCCCEEEEecCCCC-c-----------------------------------HHHHHHHHhCCEEEe
Confidence 3333333 48899999986321 0 012334567999999
Q ss_pred cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007212 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 403 (612)
.++.. .+ ++.+|+||+|...+.+.. .+++++++.+ +.
T Consensus 148 ~~~~~-----------~~--------~~~~i~n~v~~~~~~~~~-----------------------~~~~~~~~~~-~~ 184 (364)
T 1f0k_A 148 AFPGA-----------FP--------NAEVVGNPVRTDVLALPL-----------------------PQQRLAGREG-PV 184 (364)
T ss_dssp SSTTS-----------SS--------SCEECCCCCCHHHHTSCC-----------------------HHHHHTTCCS-SE
T ss_pred cChhh-----------cC--------CceEeCCccchhhcccch-----------------------hhhhcccCCC-Cc
Confidence 87643 11 578999999987665431 1345566533 22
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeE-EEEEecCChhHHHHHHHHHHHCC-CceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQ-IIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~-lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.++++.|++.+.||.+.+++|++.+.+ +++ ++++|+|+ . +.++++..+++ .++.+.+.. +++..+|+.||++
T Consensus 185 ~il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~--~-~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~ 258 (364)
T 1f0k_A 185 RVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS--Q-QSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVV 258 (364)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC--H-HHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEE
T ss_pred EEEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch--H-HHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEE
Confidence 355566799999999999999999966 788 56788887 2 45666665554 467777765 4456799999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc--------cceecCcceEEecccccccccCCCCC--HHHHHHHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV--------DTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRAL 551 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~--------e~v~~g~~G~~~~~~~~~~~~v~~~d--~~~la~~i~~ll 551 (612)
|+||. |++++|||++|+|+|+++.+|.. ++++++ .|+++ ++.| +++++++|.++
T Consensus 259 v~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~----------~~~d~~~~~la~~i~~l- 322 (364)
T 1f0k_A 259 VCRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKII----------EQPQLSVDAVANTLAGW- 322 (364)
T ss_dssp EECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEEC----------CGGGCCHHHHHHHHHTC-
T ss_pred EECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEe----------ccccCCHHHHHHHHHhc-
Confidence 99994 99999999999999999999865 355555 59976 8888 99999999998
Q ss_pred HhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+ ++.+.++++++. .+.|+|+.++++|+++|++..
T Consensus 323 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 323 -S--RETLLTMAERARAASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp -C--HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC-
T ss_pred -C--HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 5 677788887773 478999999999999998764
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-28 Score=272.03 Aligned_cols=367 Identities=15% Similarity=0.174 Sum_probs=265.2
Q ss_pred HHHHHHHHHH-hhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH-HHHhhhcCCCC-----c--CCceEEEEEecCCc
Q 007212 201 SLLCQAALEA-PRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC-YLKTMYKPKGM-----Y--KSAKVVFCIHNIAY 271 (612)
Q Consensus 201 ~~~~~~~~~~-~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~-~l~~~~~~~~~-----~--~~~pvv~~iH~~~~ 271 (612)
.+|+.++++. ++.+...... +.. +++|| |||+||||+++++. +++.++-..|+ + .+..++||+|++.+
T Consensus 273 ~ff~~a~lq~ilr~~~~~~~~-~~~-l~~p~-viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~ 349 (796)
T 1l5w_A 273 YFQCACSVADILRRHHLAGRK-LHE-LADYE-VIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMP 349 (796)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC-GGG-HHHHE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSG
T ss_pred HHHHHHHHHHHHHHHHHcCCC-hhh-cCCcc-EEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcH
Confidence 5788888876 5543210000 000 11478 59999999999988 55544321121 1 36789999999999
Q ss_pred ccc--cCcccccccC---------CCcccccc-----------cccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHH
Q 007212 272 QGR--FAFEDFGLLN---------LPAQFKSS-----------FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYA 329 (612)
Q Consensus 272 ~~~--~~~~~~~~~~---------l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~ 329 (612)
+|. |+...+..+- ++..+... +.. .+. .....+++++.++..|+.|.+||+-+.
T Consensus 350 egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~~~-~~i---~~~~~vnMa~lai~~S~~VNgVS~lH~ 425 (796)
T 1l5w_A 350 EALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAK-LAV---VHDKQVHMANLCVVGGFAVNGVAALHS 425 (796)
T ss_dssp GGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHH-HCS---EETTEEEHHHHHHHHSSEEEESSHHHH
T ss_pred hhhhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHHHhh-hhc---ccCCcccHHHHHHHhcCccccccHHHH
Confidence 985 5554442211 01100000 000 001 112367899999999999999999999
Q ss_pred HHHHcCcCCCccchhhhhccCeEEeeCCccCCCc----CCCcccccccccC----------------cch------hhhc
Q 007212 330 QELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD----------------AST------VMDA 383 (612)
Q Consensus 330 ~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~----~p~~~~~~~~~~~----------------~~~------~~~~ 383 (612)
+.++.. .++ ..-. +.+.++..|.||||...| +|..++.+..+|+ ..+ +.+.
T Consensus 426 e~ik~~-~f~-~~~~-~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~ 502 (796)
T 1l5w_A 426 DLVVKD-LFP-EYHQ-LWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREI 502 (796)
T ss_dssp HHHHHT-TSH-HHHH-HCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHH
T ss_pred HHHHhH-Hhh-HHHH-hCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHH
Confidence 999852 232 1111 223489999999999999 7877766666665 332 3467
Q ss_pred cHHHHHH----HHHHhCCCCCCCCcEEEEEccCccccCHHH-HHHHHHhccc---------CCeEEEEEecCChhHHHH-
Q 007212 384 KPLLKEA----LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ- 448 (612)
Q Consensus 384 ~~~~~~~----l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~-li~A~~~l~~---------~~~~lvivG~g~~~~~~~- 448 (612)
|..+|.+ +++++|++.+++.+.++++.|+.++||.++ ++..+..+.+ .+++|++.|.+.+.++..
T Consensus 503 K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK 582 (796)
T 1l5w_A 503 KQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAK 582 (796)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHH
Confidence 7778888 589999999999999999999999999999 8888887755 479999999988655444
Q ss_pred -----HHHHHH------HCCC--ceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcc
Q 007212 449 -----LEQLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLV 513 (612)
Q Consensus 449 -----l~~l~~------~~~~--~v~~~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~ 513 (612)
+.+++. ..++ +|.++..|+..+++.++++||++++||+ +|+||+..+-||.+|++.|.+-.|...
T Consensus 583 ~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanv 662 (796)
T 1l5w_A 583 NIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANV 662 (796)
T ss_dssp HHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHH
T ss_pred HHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeee
Confidence 888877 5667 8999999999999999999999999999 899999999999999999988889888
Q ss_pred cceec--CcceEEecccccccccCCCCCHHHHH---HHHHHHHHhhC-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 514 DTVEE--GFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 514 e~v~~--g~~G~~~~~~~~~~~~v~~~d~~~la---~~i~~ll~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
|+.++ ..|||+|| . +++++. .+..+..+-+. .+.++++..+.+...|||... .+|..+|.++
T Consensus 663 Ei~e~vG~~NgF~FG----------~-~~~ev~~l~~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L 730 (796)
T 1l5w_A 663 EIAEKVGEENIFIFG----------H-TVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDK-HAFDQMLHSI 730 (796)
T ss_dssp HHHHHHCGGGSEECS----------C-CHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCT-TTTHHHHHHT
T ss_pred ehhhccCCCcEEEec----------C-CHHHHHHHHHcccCHHHHhhcCHHHHHHHHHHHcCCCCCCcH-HHHHHHHHHH
Confidence 88755 46999984 2 555554 33322222221 246788888888999999986 8899999998
Q ss_pred HH
Q 007212 588 EV 589 (612)
Q Consensus 588 ~~ 589 (612)
+.
T Consensus 731 ~~ 732 (796)
T 1l5w_A 731 GK 732 (796)
T ss_dssp ST
T ss_pred hc
Confidence 64
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=272.94 Aligned_cols=473 Identities=15% Similarity=0.145 Sum_probs=312.6
Q ss_pred ccccHHHHhhchHHHHHhCCCeEEEEEecCCc-c-------------ccccCc----------cEEEEEEeCCeeeEEEE
Q 007212 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-Y-------------KDAWDT----------DVVIELKVGDKIEKVRF 154 (612)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~-~-------------~~~~~~----------~~~~~~~~~~~~~~~~~ 154 (612)
..||+|........+++..|...+-+.-+|.. + ++.|.. ...+++..+++....-.
T Consensus 112 gnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~a~~ 191 (796)
T 2c4m_A 112 GNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDMKTRAIP 191 (796)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTEEEEEEE
T ss_pred CCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCccccCCCceeEecCCcEEEEEeCCEEEEEEE
Confidence 58999999999999999999999999887651 1 111211 12233444443222111
Q ss_pred EEeeecC-----ce---EEEEeCc-ccc-cc-------------ccCC-CCCcccCCCCCCCCchhhHHH---HHHHHHH
Q 007212 155 FHCHKRG-----VD---RVFVDHP-WFL-AK-------------VWGK-TQSKIYGPRTGEDYQDNQLRF---SLLCQAA 207 (612)
Q Consensus 155 ~~~~~~g-----v~---~~~v~~~-~~~-~~-------------~~g~-~~~~~y~~~~g~~~~~~~~r~---~~~~~~~ 207 (612)
+.....| +. .+..... .|. +. .+-+ --..+|++.+ .+....+|+ .+|+.++
T Consensus 192 yd~pi~gy~~~~~n~lrlW~a~~~~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~--~~~Gk~lRL~Qe~ff~~a~ 269 (796)
T 2c4m_A 192 YDMPITGYGTHNVGTLRLWKAEPWEEFDYDAFNAQRFTDAIIERERVSDICRVLYPNDT--TYEGKKLRVRQQYFFTSAS 269 (796)
T ss_dssp EEEEECCTTCCCCEEEEEEEEEESSSSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCS--SHHHHHHHHHHHHHHHHHH
T ss_pred EeccccCcCCCceEEEEEEecccccccchhhccCcchhhhhhchHhhhchhhcCcCCCC--CcchHHHHHHhHHHHHHHH
Confidence 1112212 11 1111111 010 00 0000 0013565322 122234443 5788888
Q ss_pred HHH-hhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH-HHHhhhcCCCCc-------CCceEEEEEecCCcccc--cC
Q 007212 208 LEA-PRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC-YLKTMYKPKGMY-------KSAKVVFCIHNIAYQGR--FA 276 (612)
Q Consensus 208 ~~~-~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~-~l~~~~~~~~~~-------~~~pvv~~iH~~~~~~~--~~ 276 (612)
++. ++.+..... -|.. +++|| |||+||||+++++. +++.++-..|+- .+..++||+|++.++|. |+
T Consensus 270 lq~ilr~~~~~~~-~l~~-l~~p~-viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp 346 (796)
T 2c4m_A 270 LQAMIQDHLAHHK-DLSN-FAEFH-SVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWD 346 (796)
T ss_dssp HHHHHHHHHHHSS-CSTT-HHHHE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEE
T ss_pred HHHHHHHHHHhCC-Chhh-cCCCe-EEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCC
Confidence 875 554311000 0000 12478 59999999999988 555442111211 36689999999999985 55
Q ss_pred ccccccc---------CCCcccccccccccC------CCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCcc
Q 007212 277 FEDFGLL---------NLPAQFKSSFDFIDG------YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVE 341 (612)
Q Consensus 277 ~~~~~~~---------~l~~~~~~~~~~~~~------~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~ 341 (612)
...+..+ +++..+...+....+ -........+++++.++..|+.|.+||+.+.+.++.. .++ .
T Consensus 347 ~~l~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~-~f~-~ 424 (796)
T 2c4m_A 347 EQIFQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAE-TLA-D 424 (796)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHT-TTH-H
T ss_pred HHHHHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhh-hhh-h
Confidence 5544221 111111110000000 0000112367899999999999999999999999852 233 1
Q ss_pred chhhhhccCeEEeeCCccCCCc----CCCcccccccccC-----------------cch------hhhccHHHHHH----
Q 007212 342 LDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD-----------------AST------VMDAKPLLKEA---- 390 (612)
Q Consensus 342 ~~~~~~~~~i~vI~ngvd~~~~----~p~~~~~~~~~~~-----------------~~~------~~~~~~~~~~~---- 390 (612)
.-. ..+.++..|.||||...| +|..++.+...|+ ..+ +.+.|..+|.+
T Consensus 425 ~~~-~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~ 503 (796)
T 2c4m_A 425 WYA-LWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEW 503 (796)
T ss_dssp HHH-HCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-cCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 111 234589999999999999 7876666655555 333 34677778888
Q ss_pred HHHHhCCCCCCCCcEEEEEccCccccCHHH-HHHHHHhccc---------CCeEEEEEecCChhHHHH------HHHHHH
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ------LEQLEI 454 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~-li~A~~~l~~---------~~~~lvivG~g~~~~~~~------l~~l~~ 454 (612)
+++++|++.+++.+.++++.|+.++||.++ ++..+..+.+ .+++|++.|.+.+.++.. +.+++.
T Consensus 504 l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~ 583 (796)
T 2c4m_A 504 ILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIAD 583 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHH
Confidence 599999999999999999999999999999 8888887753 379999999988655444 888877
Q ss_pred ------HCCC--ceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--Ccce
Q 007212 455 ------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTG 522 (612)
Q Consensus 455 ------~~~~--~v~~~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G 522 (612)
..++ +|.++..|+..+++.++++||++++||+ +|+||+..+-+|.+|++.|.+-.|...|+.++ ..||
T Consensus 584 ~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~Ng 663 (796)
T 2c4m_A 584 LVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENA 663 (796)
T ss_dssp HHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGS
T ss_pred HhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcE
Confidence 6777 8999999999999999999999999999 89999999999999999998888888888755 4699
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 523 FQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 523 ~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
|+||. ...++.++..+ .+..+-+. .+.++++..+.+...|||... .+|.++|.+++.
T Consensus 664 F~FG~--------~~~ev~~l~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 664 YIFGA--------RVEELPALRES-YKPYELYETVPGLKRALDALDNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp EEESC--------CTTTHHHHHHT-CCHHHHHHHSTTHHHHHHTTTSSSSCCTTC-CHHHHHHHHHHS
T ss_pred EEecC--------chhhHHHHHHh-hChHHHhhcCHHHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHh
Confidence 99952 23677777665 44433321 135777777778899999988 889999999974
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-27 Score=255.83 Aligned_cols=295 Identities=14% Similarity=0.113 Sum_probs=208.8
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
++| |||+|||+..+++.+++... .++|+++++|...+.. ..+.. ++ .
T Consensus 123 ~~D-iV~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~pfp~~----~~~~~--lp--------------------~ 169 (482)
T 1uqt_A 123 DDD-IIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIPFPTP----EIFNA--LP--------------------T 169 (482)
T ss_dssp TTC-EEEEESGGGTTHHHHHHHTT------CCSCEEEECCSCCCCH----HHHTT--ST--------------------T
T ss_pred CCC-EEEEECchHHHHHHHHHHhC------CCCcEEEEEcCCCCCH----HHHhh--Cc--------------------c
Confidence 358 59999999999999988753 4899999999632210 00010 00 1
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHHcCc--CCCccc------hhhhhccCeEEeeCCccCCCcCCCcccccccccCcch
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELVSGE--DKGVEL------DNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~G~~~------~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
...+...+..+|.+.+.+..+.+.+.+.. ..+.+. ...-+..++.+||||||++.|.+....
T Consensus 170 ~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~---------- 239 (482)
T 1uqt_A 170 YDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAG---------- 239 (482)
T ss_dssp HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHS----------
T ss_pred HHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcC----------
Confidence 12233445678998888887777654210 011100 000012479999999998877542100
Q ss_pred hhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEEEEEecCC-------hhHH
Q 007212 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KPME 446 (612)
Q Consensus 380 ~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~lvivG~g~-------~~~~ 446 (612)
..... ...++++++ ++++|+++||+++.||++.+++|++.+.+ + +++|+++|.+. ..++
T Consensus 240 --~~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~ 311 (482)
T 1uqt_A 240 --PLPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIR 311 (482)
T ss_dssp --CCCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHH
T ss_pred --cchHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHH
Confidence 00011 346777776 34799999999999999999999999864 2 58899999632 1355
Q ss_pred HHHHHHHHHC----C----CceEEE-eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC-----ceEEcCCCCc
Q 007212 447 KQLEQLEILY----P----EKARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGL 512 (612)
Q Consensus 447 ~~l~~l~~~~----~----~~v~~~-~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~ 512 (612)
+++++++.+. + ..+.++ +.++.+++..+|+.||++|+||..|+||++++|||+||+ |+|+|+.+|.
T Consensus 312 ~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~ 391 (482)
T 1uqt_A 312 HQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA 391 (482)
T ss_dssp HHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG
T ss_pred HHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC
Confidence 6666665432 1 125554 455788888999999999999999999999999999997 8999998888
Q ss_pred ccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHH
Q 007212 513 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 513 ~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l 587 (612)
.+.+. +|+++ +|.|+++++++|.++++++ ++.++++.+++ ....|||+..++++++.|+++
T Consensus 392 ~~~l~---~g~lv----------~p~d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 392 ANELT---SALIV----------NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp GGTCT---TSEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHhC---CeEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 88872 78876 9999999999999999863 34455555554 246699999999999999876
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=263.87 Aligned_cols=215 Identities=14% Similarity=0.082 Sum_probs=168.8
Q ss_pred hCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhC
Q 007212 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 396 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 396 (612)
.+|.++++|+...+ ++ .++.+|||..+.....+... +...++++|
T Consensus 328 ~~d~~i~~s~~~~~-------~~---------~~i~~ipn~~~~~~~~~~~~-------------------~~~~r~~~~ 372 (568)
T 2vsy_A 328 LGDAFALPPALEPF-------YS---------EHVLRLQGAFQPSDTSRVVA-------------------EPPSRTQCG 372 (568)
T ss_dssp EECTTTSCTTTGGG-------CS---------SEEEECSSCSCCCCTTCCCC-------------------CCCCTGGGT
T ss_pred EECCCcCCcccccC-------Cc---------ceeEcCCCcCCCCCCCCCCC-------------------CCCCccccC
Confidence 47888888875432 21 18999999544322111100 112356778
Q ss_pred CCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEe-cCChhHHHHHHHHHHHCC---CceEEEeccChHH
Q 007212 397 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG-TGKKPMEKQLEQLEILYP---EKARGVAKFNIPL 470 (612)
Q Consensus 397 l~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG-~g~~~~~~~l~~l~~~~~---~~v~~~~~~~~~~ 470 (612)
++.+ .+++++||+.+ ||++.+++|+.++.+ ++++|+|+| +|+ ..+.++++..+.+ ++|.+.+..+.++
T Consensus 373 ~~~~---~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~--~~~~l~~~~~~~~l~~~~v~~~g~~~~~~ 446 (568)
T 2vsy_A 373 LPEQ---GVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE--ADARLRAFAHAQGVDAQRLVFMPKLPHPQ 446 (568)
T ss_dssp CCTT---SCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT--HHHHHHHHHHHTTCCGGGEEEECCCCHHH
T ss_pred CCCC---CEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH--HHHHHHHHHHHcCCChhHEEeeCCCCHHH
Confidence 8743 35669999999 999999999999854 799999999 776 6677777776653 5688888888788
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEE-------cCCC-------CcccceecCcceEEecccccccccCC
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV-------ASTG-------GLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~-------s~~g-------g~~e~v~~g~~G~~~~~~~~~~~~v~ 536 (612)
+..+|+.||++|+||.+ ++|++++|||+||+|||+ |+.| |+.|+|.
T Consensus 447 ~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~------------------- 506 (568)
T 2vsy_A 447 YLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNV------------------- 506 (568)
T ss_dssp HHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBC-------------------
T ss_pred HHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhc-------------------
Confidence 88999999999999999 999999999999999999 9999 8887653
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH-----HhhcCcHHHHHHHHHHHHHHHHcCCCCC
Q 007212 537 PVDVAAVSTTVRRALATYGTQALAEMMKNGM-----AQDLSWKGPAKKWEETLLNLEVAGSEPG 595 (612)
Q Consensus 537 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~-----~~~fsw~~~a~~~~~~y~~l~~~~~~~~ 595 (612)
.|+++++++|.+++++ ++.+.++++++. .+.|||+.++++|+++|++++......|
T Consensus 507 -~~~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~~~~ 567 (568)
T 2vsy_A 507 -ADDAAFVAKAVALASD--PAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRHGWLG 567 (568)
T ss_dssp -SSHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred -CCHHHHHHHHHHHhcC--HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2889999999999998 677777777663 3679999999999999999997765544
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-26 Score=245.78 Aligned_cols=223 Identities=14% Similarity=0.082 Sum_probs=170.4
Q ss_pred HHHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC-ccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 311 MKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 311 ~k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+..+ +.+|.++++|+..++.+.+ +|++.+ ++.+|+|| +|...+.+.... +
T Consensus 143 ~~~~~~~~~d~ii~~s~~~~~~~~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~~------------------~ 195 (375)
T 3beo_A 143 NRQLTGVMADLHFSPTAKSATNLQK---ENKDES------RIFITGNTAIDALKTTVKETY------------------S 195 (375)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC------------------C
T ss_pred hhhHHhhhhheeeCCCHHHHHHHHH---cCCCcc------cEEEECChhHhhhhhhhhhhh------------------h
Confidence 34434 4599999999999999986 576544 89999999 887655432100 1
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccc-cCHHHHHHHHHhccc--CCeEEEEEecCC-hhHHHHHHHHHHHCCCceEEEe
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVA 464 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~-Kg~d~li~A~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~ 464 (612)
..+++++ + ++.++++++||+.+. ||++.+++|++.+.+ +++++++ |.|+ ..+.+.++++... .+++.+.+
T Consensus 196 ~~~~~~~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~-~~~v~~~g 269 (375)
T 3beo_A 196 HPVLEKL--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGD-YGRIHLIE 269 (375)
T ss_dssp CHHHHTT--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTT-CTTEEEEC
T ss_pred HHHHHhc--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhc-cCCEEEeC
Confidence 1233333 2 234578899999876 999999999999865 6888655 6554 3455666665322 24688877
Q ss_pred ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCcceEEecccccccccCCCCCHHHH
Q 007212 465 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 465 ~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~l 543 (612)
......+..+++.||++|+|| |.+++|||++|+|||+++. ||..|+++++ +|+++ ++ |+++|
T Consensus 270 ~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v----------~~-d~~~l 332 (375)
T 3beo_A 270 PLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLA----------GT-DEETI 332 (375)
T ss_dssp CCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEEC----------CS-CHHHH
T ss_pred CCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEc----------CC-CHHHH
Confidence 777677889999999999999 7789999999999999964 9999999887 99975 65 99999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHH
Q 007212 544 STTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 544 a~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~ 585 (612)
+++|.+++++ ++.+++|++++ +.+.|+|+.+++.++++++
T Consensus 333 a~~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 333 FSLADELLSD--KEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHHHHHHC--HHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhC--hHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 9999999998 77788887766 3467999999999888763
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=246.08 Aligned_cols=231 Identities=16% Similarity=0.094 Sum_probs=173.0
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHHHHH
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (612)
.+.+|.++++|+..++.+.+ +|++.+ ++.+|+||+ |...+.+... ......+..+++
T Consensus 139 ~~~~d~ii~~s~~~~~~l~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~-------------~~~~~~~~~~~~ 196 (384)
T 1vgv_A 139 GHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQV-------------MSSDKLRSELAA 196 (384)
T ss_dssp HTTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHT-------------TTCHHHHHHHHT
T ss_pred HhhccEEEcCcHHHHHHHHH---cCCChh------hEEEeCChHHHHHHhhhhcc-------------ccchhhhHHHHH
Confidence 34599999999999999886 676544 899999995 4322211000 000001235667
Q ss_pred HhC-CCCCCCCcEEEEEccCccc-cCHHHHHHHHHhccc--CCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccCh
Q 007212 394 EVG-LPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 394 ~~g-l~~~~~~~~i~~iGrl~~~-Kg~d~li~A~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 468 (612)
++| ++.+ +.++++++||+.++ ||++.+++|++.+.+ ++++|+++ |.+ +.+.+.++++.... +++.+.+....
T Consensus 197 ~~~~~~~~-~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~-~~~~~~l~~~~~~~-~~v~~~g~~~~ 273 (384)
T 1vgv_A 197 NYPFIDPD-KKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLN-PNVREPVNRILGHV-KNVILIDPQEY 273 (384)
T ss_dssp TCTTCCTT-SEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHHTTC-TTEEEECCCCH
T ss_pred hccccCCC-CCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCC-HHHHHHHHHHhhcC-CCEEEeCCCCH
Confidence 777 6432 33578899999876 999999999999865 68999886 433 34566676664332 46887765555
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCcceEEecccccccccCCCCCHHHHHHHH
Q 007212 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i 547 (612)
+++..+|+.||++|.|| |.+++|||++|+|||+++. |+..|++++| +|+++ ++ |+++|+++|
T Consensus 274 ~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv----------~~-d~~~la~~i 336 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLV----------GT-DKQRIVEEV 336 (384)
T ss_dssp HHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEE----------CS-SHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEe----------CC-CHHHHHHHH
Confidence 67889999999999999 4458999999999999986 9999999888 99976 66 999999999
Q ss_pred HHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHHH
Q 007212 548 RRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 548 ~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
.+++++ ++.+++|++++ +.+.|+|+.+++.++++|.+++.
T Consensus 337 ~~ll~d--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 337 TRLLKD--ENEYQAMSRAHNPYGDGQACSRILEALKNNRISLGS 378 (384)
T ss_dssp HHHHHC--HHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC--
T ss_pred HHHHhC--hHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhhcc
Confidence 999998 77788888766 34679999999999988877653
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-25 Score=214.96 Aligned_cols=184 Identities=30% Similarity=0.506 Sum_probs=157.0
Q ss_pred EeeCCccCCCcC--CCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCc-cccCHHHHHHHHHhcc
Q 007212 353 GIVNGMDVQEWN--PLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFI 429 (612)
Q Consensus 353 vI~ngvd~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~-~~Kg~d~li~A~~~l~ 429 (612)
.||||+|.+.|. |... .....+..+++++|++. .++|+|+||+. +.||++.+++|+..+.
T Consensus 1 gipngvd~~~f~~~~~~~--------------~~~~~~~~~r~~~~~~~---~~~i~~~G~~~~~~K~~~~li~a~~~l~ 63 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTG--------------SRDERKKSLLSKFGMDE---GVTFMFIGRFDRGQKGVDVLLKAIEILS 63 (200)
T ss_dssp ----CCCTTTSSGGGSCS--------------CHHHHHHHHHHHTTCCS---CEEEEEESCBCSSSSCHHHHHHHHHHHT
T ss_pred CCCCccChhhcccccccc--------------chhhHHHHHHHHcCCCC---CCEEEEeeccccccCCHHHHHHHHHHHH
Confidence 389999999998 7531 11223567899999873 36999999999 9999999999999995
Q ss_pred --c--CCeEEEEEecCChhHHHHHHHHHHHCCCceEE-EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCce
Q 007212 430 --K--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVP 504 (612)
Q Consensus 430 --~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~-~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~Pv 504 (612)
+ ++++|+|+|.+++.+.+.++++..+++ ++.+ .+..+.+++..+++.||++|+||..|++|++++|||++|+||
T Consensus 64 ~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~Pv 142 (200)
T 2bfw_A 64 SKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIP 142 (200)
T ss_dssp TSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEE
T ss_pred hhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCE
Confidence 3 689999999988667788888888877 7888 888888888899999999999999999999999999999999
Q ss_pred EEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH-hhCHHHHHHHHHHHH
Q 007212 505 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGTQALAEMMKNGM 567 (612)
Q Consensus 505 I~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~ 567 (612)
|+++.+++.|++ ++.+|+++ ++.|+++++++|.++++ + ++.+.++++++.
T Consensus 143 I~~~~~~~~e~~-~~~~g~~~----------~~~~~~~l~~~i~~l~~~~--~~~~~~~~~~a~ 193 (200)
T 2bfw_A 143 IASAVGGLRDII-TNETGILV----------KAGDPGELANAILKALELS--RSDLSKFRENCK 193 (200)
T ss_dssp EEESCHHHHHHC-CTTTCEEE----------CTTCHHHHHHHHHHHHHCC--HHHHHHHHHHHH
T ss_pred EEeCCCChHHHc-CCCceEEe----------cCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHH
Confidence 999999999999 88999987 88999999999999999 8 777778877763
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=235.67 Aligned_cols=294 Identities=13% Similarity=0.135 Sum_probs=213.7
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|..||+|..++|.+++.+. .+.++.|.+|-..+.. ..+. -+|.. ...
T Consensus 151 D-~VwVhDYhL~llp~~lR~~~------~~~~igfFlHiPfPs~----e~f~--~Lp~~------------------~r~ 199 (496)
T 3t5t_A 151 P-VYLVHDYQLVGVPALLREQR------PDAPILLFVHIPWPSA----DYWR--ILPKE------------------IRT 199 (496)
T ss_dssp C-EEEEESGGGTTHHHHHHHHC------TTSCEEEECCSCCCCH----HHHT--TSCHH------------------HHH
T ss_pred C-EEEEeCccHhHHHHHHHhhC------CCCeEEEEEcCCCCCH----HHHh--hCcHh------------------HHH
Confidence 6 59999999999999999875 6899999999532211 1111 11110 123
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCc--CC-Cccchh---h----hhccCeEEeeCCccCCCcCCCcccccccccCcch
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGE--DK-GVELDN---I----IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~-G~~~~~---~----~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
.+-.++..+|.|.+.++.+++.+.+.. .. |.+.+. . -+..++.++|+|||++.|.+....
T Consensus 200 ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~---------- 269 (496)
T 3t5t_A 200 GILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ---------- 269 (496)
T ss_dssp HHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC----------
T ss_pred HHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH----------
Confidence 345678899999999999998866421 11 322110 0 122478999999999998765310
Q ss_pred hhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C---CeEEEEEecC-----C--hhHHH
Q 007212 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E---NVQIIVLGTG-----K--KPMEK 447 (612)
Q Consensus 380 ~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~---~~~lvivG~g-----~--~~~~~ 447 (612)
. +..++++++ ++++|+++||+++.||++.+++|+ ++.+ + ++.|+++|.+ + ..+++
T Consensus 270 ---~----~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~ 336 (496)
T 3t5t_A 270 ---L----PEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVH 336 (496)
T ss_dssp ---C----CTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHH
T ss_pred ---H----HHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHH
Confidence 0 145666776 348999999999999999999999 7754 4 3678888742 1 24566
Q ss_pred HHHHHHHHCCC-----ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcC---CceEEcCCCCcccceecC
Q 007212 448 QLEQLEILYPE-----KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG---TVPIVASTGGLVDTVEEG 519 (612)
Q Consensus 448 ~l~~l~~~~~~-----~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G---~PvI~s~~gg~~e~v~~g 519 (612)
++++++.+.+. .|.+.+..+.+++..+|+.||++++||..||||++.+|||+|| .|+|+|..+|..+.+.
T Consensus 337 ~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~-- 414 (496)
T 3t5t_A 337 RVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG-- 414 (496)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG--
T ss_pred HHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC--
Confidence 67776544321 4778777788888899999999999999999999999999997 8999999999888884
Q ss_pred cceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 520 FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 520 ~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
.+|+++ +|.|+++++++|.++|+++ .++++++.++. ....++++.-++.+++-+.....+
T Consensus 415 ~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 415 EYCRSV----------NPFDLVEQAEAISAALAAG-PRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp GGSEEE----------CTTBHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcccc
Confidence 368875 9999999999999999984 33344443333 467799999999999988877544
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=249.45 Aligned_cols=342 Identities=17% Similarity=0.167 Sum_probs=249.3
Q ss_pred CCcEEEEeCCCcccchHH-HHHhhhcCCCCc-------CCceEEEEEecCCcccc--cCcccccccC---------CCcc
Q 007212 228 KKNVVFVANDWHTSLIPC-YLKTMYKPKGMY-------KSAKVVFCIHNIAYQGR--FAFEDFGLLN---------LPAQ 288 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~-~l~~~~~~~~~~-------~~~pvv~~iH~~~~~~~--~~~~~~~~~~---------l~~~ 288 (612)
+||+ ||+||||+++++. +++.++-..++- ....++||+|++.++|. |+...+..+- ++..
T Consensus 320 ~p~v-iHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~ 398 (824)
T 2gj4_A 320 DKVA-IQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQR 398 (824)
T ss_dssp HHEE-EEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCcE-EEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHH
Confidence 4675 9999999999998 555443222210 23459999999999997 7665553311 0011
Q ss_pred ccc-----------ccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC
Q 007212 289 FKS-----------SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 357 (612)
Q Consensus 289 ~~~-----------~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng 357 (612)
+.. .+........- ....+++++.++..|+.|.+||+-+.+.++.. .++ +.-. ..+.++..|.||
T Consensus 399 f~~~~~~~~~~~~~~~~~~~~i~~~-~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~-~f~-~~~~-~~p~k~~~iTNG 474 (824)
T 2gj4_A 399 FLNRVAAAFPGDVDRLRRMSLVEEG-AVKRINMAHLCIAGSHAVNGVARIHSEILKKT-IFK-DFYE-LEPHKFQNKTNG 474 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEECS-SSCEEEHHHHHHHTCSCEEESSHHHHHHHHHT-TTH-HHHH-HCGGGEEECCCC
T ss_pred HHHHHHHHcCCcHHHHHhhhhhhhc-CCCcccHHHHHHHhcCceeeEcHHHHHHHhhH-HhH-HHHH-cChhhcccccCC
Confidence 000 00001111100 12468999999999999999999999999742 233 1111 124589999999
Q ss_pred ccCCCc----CCCcccccccc-----------------cCc-chhh----hccHHHHHH----HHHHhCCCCCCCCcEEE
Q 007212 358 MDVQEW----NPLTDKYIGVK-----------------YDA-STVM----DAKPLLKEA----LQAEVGLPVDRNIPVIG 407 (612)
Q Consensus 358 vd~~~~----~p~~~~~~~~~-----------------~~~-~~~~----~~~~~~~~~----l~~~~gl~~~~~~~~i~ 407 (612)
||...| +|..++.+..+ |.. .++. +.|..+|.+ ++++.|++.+++.+.++
T Consensus 475 I~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g 554 (824)
T 2gj4_A 475 ITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDV 554 (824)
T ss_dssp BCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEE
T ss_pred cChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEe
Confidence 999999 77766555544 554 2331 566777777 88999999999999999
Q ss_pred EEccCccccCHHHH-HHHHHhcc---c-C-----CeEEEEEecCChhHHHH------HHHHHHHC------CC--ceEEE
Q 007212 408 FIGRLEEQKGSDIL-AAAIPHFI---K-E-----NVQIIVLGTGKKPMEKQ------LEQLEILY------PE--KARGV 463 (612)
Q Consensus 408 ~iGrl~~~Kg~d~l-i~A~~~l~---~-~-----~~~lvivG~g~~~~~~~------l~~l~~~~------~~--~v~~~ 463 (612)
++.|+.++||.+++ +..+..+. + + +++|++.|.+.+.++.. +.+++... ++ +|.++
T Consensus 555 ~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl 634 (824)
T 2gj4_A 555 QVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFL 634 (824)
T ss_dssp EESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEE
T ss_pred eeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEE
Confidence 99999999999998 88888774 2 2 67999999988655444 78887754 55 79999
Q ss_pred eccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCccccee--cCcceEEecccccccccCCCCC
Q 007212 464 AKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~~~~~~~~~~~~v~~~d 539 (612)
..|+..+++.++++||++++||+ +|+||++.+-||.+|++.|++-.|...|+.+ ...|||+|| . .
T Consensus 635 ~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG----------~-~ 703 (824)
T 2gj4_A 635 ENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFG----------M-R 703 (824)
T ss_dssp TTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS----------C-C
T ss_pred CCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeC----------C-c
Confidence 99999999999999999999999 8999999999999999999998888888764 346899985 2 2
Q ss_pred HHHHHHHHH-------HHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 540 VAAVSTTVR-------RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 540 ~~~la~~i~-------~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
++++ ..+. .+.+. .+.++++..+.+...|||... .+|.++|.+++.
T Consensus 704 ~~ev-~~l~~~~~~a~~~Y~~--~~~l~~v~d~i~~g~fs~~~~-~~y~~ly~~l~~ 756 (824)
T 2gj4_A 704 VEDV-DRLDQRGYNAQEYYDR--IPELRQIIEQLSSGFFSPKQP-DLFKDIVNMLMH 756 (824)
T ss_dssp HHHH-HHHHHHCCCHHHHHHH--CHHHHHHHHHHHHTTTCTTST-TTTHHHHHHHHH
T ss_pred HHHH-HHHHHcCCCHHHHhcC--CHHHHHHHHHHHhCCCCCCCh-HHHHHHHHHHHc
Confidence 5555 3331 22232 356777777778899999998 889999999974
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=200.66 Aligned_cols=159 Identities=16% Similarity=0.170 Sum_probs=133.1
Q ss_pred cEEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
++|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++..+++.++.+ +..+.+++..+|+.||++|
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v 79 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP--DEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYV 79 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST--THHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEE
T ss_pred eEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc--cHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEE
Confidence 789999999999999999999999965 699999999987 567777777777666776 6667888889999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCC-ceEE-cCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007212 483 IPSRFEPCGLIQLHAMRYGT-VPIV-ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~-PvI~-s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 560 (612)
+||.+|+||++++|||++|+ |||+ ++.|+..+++.++.+ ++ ++.|+++++++|.+++++ ++.+.
T Consensus 80 ~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~----------~~~~~~~l~~~i~~l~~~--~~~~~ 145 (166)
T 3qhp_A 80 HAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LF----------EPNNAKDLSAKIDWWLEN--KLERE 145 (166)
T ss_dssp ECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EE----------CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred ECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EE----------cCCCHHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999998 9999 568999999988765 33 889999999999999998 67777
Q ss_pred HHHHHH--HHhhcCcHHHHHH
Q 007212 561 EMMKNG--MAQDLSWKGPAKK 579 (612)
Q Consensus 561 ~~~~~~--~~~~fsw~~~a~~ 579 (612)
++++++ ..++|||+.++++
T Consensus 146 ~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 146 RMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHCChhhhhcC
Confidence 777776 3588999998764
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=7.3e-22 Score=208.96 Aligned_cols=219 Identities=13% Similarity=0.042 Sum_probs=163.4
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
....+|.++++|+..++.+.+ .|++.+ ++.+|+|++ |...+.+. +..++
T Consensus 143 ~~~~~~~~~~~s~~~~~~l~~---~g~~~~------ki~vi~n~~~d~~~~~~~---------------------~~~~~ 192 (376)
T 1v4v_A 143 TDVLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDAVLLAAK---------------------LGRLP 192 (376)
T ss_dssp HHHHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHHHHHHHH---------------------HCCCC
T ss_pred HHHHhceeeCCCHHHHHHHHH---cCCCcc------eEEEECCchHHHHhhhhh---------------------hhHHH
Confidence 345699999999999999986 576654 899999965 42211000 00011
Q ss_pred HHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccChH
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIP 469 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 469 (612)
+++ + ++.++++++||+...||++.+++|++.+.+ ++++++++ |++. ...+.++++... .+++.+.+.....
T Consensus 193 ~~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~-~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 193 EGL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKG-VRNFVLLDPLEYG 266 (376)
T ss_dssp TTC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTT-CTTEEEECCCCHH
T ss_pred Hhc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhcc-CCCEEEECCCCHH
Confidence 111 1 234577889999988999999999999865 68998886 6553 355666666433 2468877655555
Q ss_pred HHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHH
Q 007212 470 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 470 ~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~ 548 (612)
.+..+|+.||++|.|| + |+ ++|||++|+|+|++ +.++..++++++ +|+++ + .|+++|+++|.
T Consensus 267 ~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv----------~-~d~~~la~~i~ 329 (376)
T 1v4v_A 267 SMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLA----------G-TDPEGVYRVVK 329 (376)
T ss_dssp HHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEEC----------C-SCHHHHHHHHH
T ss_pred HHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEEC----------C-CCHHHHHHHHH
Confidence 6778999999999999 2 44 88999999999987 568888988665 78864 4 59999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 549 RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 549 ~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
+++++ ++.+++|+++ .+.|+|...++++.+.+.+++.
T Consensus 330 ~ll~d--~~~~~~~~~~--~~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 330 GLLEN--PEELSRMRKA--KNPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp HHHTC--HHHHHHHHHS--CCSSCCSCHHHHHHHHHHHHTT
T ss_pred HHHhC--hHhhhhhccc--CCCCCCChHHHHHHHHHHHHhc
Confidence 99997 7778888864 4678888899999999988875
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.1e-21 Score=180.64 Aligned_cols=141 Identities=16% Similarity=0.210 Sum_probs=125.5
Q ss_pred CCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCCh--hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
++++|+|+||+.+.||++.+++|+..+ ++++|+|+|.++. .+++.++++...+++++.+.+..+.+++..+++.||
T Consensus 22 ~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ad 99 (177)
T 2f9f_A 22 YGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK 99 (177)
T ss_dssp CCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred CCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCC
Confidence 458999999999999999999999998 7899999999873 455555533444566799999999988999999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 555 (612)
++|+||..|++|++++|||+||+|||+++.++..|++.++.+|++ + +.|+++++++|.++++++.
T Consensus 100 i~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~----------~-~~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 100 GLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYL----------V-NADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp EEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEE----------E-CSCHHHHHHHHHHHHHCTT
T ss_pred EEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEE----------e-CCCHHHHHHHHHHHHhCHH
Confidence 999999999999999999999999999999999999999999995 4 7899999999999999843
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-18 Score=181.17 Aligned_cols=245 Identities=16% Similarity=0.075 Sum_probs=169.1
Q ss_pred CCCcEEEEeCC-Ccccch-HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcC
Q 007212 227 GKKNVVFVAND-WHTSLI-PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 304 (612)
Q Consensus 227 ~~pDvVi~~h~-~~~~~~-~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 304 (612)
+++|+||+-+. |+.... ..+++.+.+ .++|+++++|++.+.. +. ...
T Consensus 73 ~~~DvIi~q~P~~~~~~~~~~~~~~lk~-----~~~k~i~~ihDl~pl~-~~---------~~~---------------- 121 (339)
T 3rhz_A 73 RHGDVVIFQTPTWNTTEFDEKLMNKLKL-----YDIKIVLFIHDVVPLM-FS---------GNF---------------- 121 (339)
T ss_dssp CTTCEEEEEECCSSCHHHHHHHHHHHTT-----SSCEEEEEESCCHHHH-CG---------GGG----------------
T ss_pred CCCCEEEEeCCCcchhhHHHHHHHHHHh-----cCCEEEEEecccHHhh-Cc---------cch----------------
Confidence 35797554443 333222 334444321 3899999999886521 10 000
Q ss_pred CchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhcc
Q 007212 305 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 305 ~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
..+..++..++.||.|+++|+.+++.+.+ +|++.. ++.++++. |.. .+..
T Consensus 122 -~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~---~G~~~~------ki~~~~~~-~~~--~~~~----------------- 171 (339)
T 3rhz_A 122 -YLMDRTIAYYNKADVVVAPSQKMIDKLRD---FGMNVS------KTVVQGMW-DHP--TQAP----------------- 171 (339)
T ss_dssp -GGHHHHHHHHTTCSEEEESCHHHHHHHHH---TTCCCS------EEEECCSC-CCC--CCCC-----------------
T ss_pred -hhHHHHHHHHHHCCEEEECCHHHHHHHHH---cCCCcC------ceeecCCC-Ccc--Cccc-----------------
Confidence 12235688899999999999999999987 676533 55443332 211 0000
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEe
Q 007212 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 464 (612)
Q Consensus 385 ~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~ 464 (612)
... ..+.++|+|+|++.....+ ..+ .++++|+|+|+|+.. +++ ++.+.+
T Consensus 172 ----------~~~--~~~~~~i~yaG~l~k~~~L-------~~l-~~~~~f~ivG~G~~~----------~l~-nV~f~G 220 (339)
T 3rhz_A 172 ----------MFP--AGLKREIHFPGNPERFSFV-------KEW-KYDIPLKVYTWQNVE----------LPQ-NVHKIN 220 (339)
T ss_dssp ----------CCC--CEEEEEEEECSCTTTCGGG-------GGC-CCSSCEEEEESCCCC----------CCT-TEEEEE
T ss_pred ----------ccc--cCCCcEEEEeCCcchhhHH-------HhC-CCCCeEEEEeCCccc----------CcC-CEEEeC
Confidence 001 1234799999999953322 222 378999999999843 244 799999
Q ss_pred ccChHHHHHHHHhccEEEEcCCC-------CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCC
Q 007212 465 KFNIPLAHMIIAGADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 465 ~~~~~~~~~i~~~aDv~v~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~ 537 (612)
.++.++++.+++.+|+.++.... ..+|.+++||||+|+|||+++.+++.++|.++.+|+.+
T Consensus 221 ~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~------------ 288 (339)
T 3rhz_A 221 YRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIV------------ 288 (339)
T ss_dssp CCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEE------------
T ss_pred CCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEe------------
Confidence 99999999999999998887211 25699999999999999999999999999999999975
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHH
Q 007212 538 VDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKK 579 (612)
Q Consensus 538 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~ 579 (612)
.+.+++++.|..+. ++.+++|++++. .+.++|...+++
T Consensus 289 ~~~~e~~~~i~~l~----~~~~~~m~~na~~~a~~~~~~~f~k~ 328 (339)
T 3rhz_A 289 KDVEEAIMKVKNVN----EDEYIELVKNVRSFNPILRKGFFTRR 328 (339)
T ss_dssp SSHHHHHHHHHHCC----HHHHHHHHHHHHHHTHHHHTTHHHHH
T ss_pred CCHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 46888988888763 346788888873 466777766555
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-19 Score=189.58 Aligned_cols=196 Identities=12% Similarity=0.034 Sum_probs=142.1
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+++..++.+|.++++|+..++.+.+ +|++ ++.+|+|+. |.+...+
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~l~~---~g~~--------ki~vi~n~~----f~~~~~~-------------------- 190 (374)
T 2xci_A 146 IEKILSKKFDLIIMRTQEDVEKFKT---FGAK--------RVFSCGNLK----FICQKGK-------------------- 190 (374)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHT---TTCC--------SEEECCCGG----GCCCCCS--------------------
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH---cCCC--------eEEEcCCCc----cCCCcCh--------------------
Confidence 4566788999999999999999986 5654 789999973 2221100
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCC---------
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPE--------- 458 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~--------- 458 (612)
++ .+ ..+++++.|+ ..||++.+++|++.+.+ ++++|+|+|+|+. ..+.++++..+.+-
T Consensus 191 --~~--~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~-~~~~l~~~~~~~gl~~~~~~~~~ 259 (374)
T 2xci_A 191 --GI--KL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIE-NAKIFEKKARDFGFKTSFFENLE 259 (374)
T ss_dssp --CC--CC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGG-GHHHHHHHHHHTTCCEEETTCCC
T ss_pred --hh--hh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHH-HHHHHHHHHHHCCCceEEecCCC
Confidence 00 01 1256777775 46899999999999865 6899999998863 22355566555442
Q ss_pred -ceEEEeccChHHHHHHHHhccEEEEcCCC-CCCcHHHHHHHHcCCceEEc-CCCCcccceecC-cceEEeccccccccc
Q 007212 459 -KARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEG-FTGFQMGSFSVDCEA 534 (612)
Q Consensus 459 -~v~~~~~~~~~~~~~i~~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g-~~G~~~~~~~~~~~~ 534 (612)
++.+ ..+. +++..+|+.||++++||.+ |++|++++|||+||+|||++ +.++..|++.+. .+|+++
T Consensus 260 ~~v~~-~~~~-~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~--------- 328 (374)
T 2xci_A 260 GDVIL-VDRF-GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGF--------- 328 (374)
T ss_dssp SSEEE-CCSS-SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEE---------
T ss_pred CcEEE-ECCH-HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEE---------
Confidence 1222 2222 4456899999999888766 67899999999999999975 789999988763 467765
Q ss_pred CCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 007212 535 VDPVDVAAVSTTVRRALATYGTQALAEMMKNG 566 (612)
Q Consensus 535 v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~ 566 (612)
.+.|+++|+++|.+++++ . .+++|++++
T Consensus 329 -~~~d~~~La~ai~~ll~d-~--~r~~mg~~a 356 (374)
T 2xci_A 329 -EVKNETELVTKLTELLSV-K--KEIKVEEKS 356 (374)
T ss_dssp -ECCSHHHHHHHHHHHHHS-C--CCCCHHHHH
T ss_pred -EeCCHHHHHHHHHHHHhH-H--HHHHHHHHH
Confidence 778999999999999986 4 344455544
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-17 Score=178.89 Aligned_cols=225 Identities=12% Similarity=0.077 Sum_probs=161.5
Q ss_pred HHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC-ccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 312 KAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 312 k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+..+ ..+|.+++.|+..++.+.+ .|++.+ ++.++.|. +|...+.+.... +.
T Consensus 163 r~~~~~~a~~~~~~se~~~~~l~~---~Gi~~~------~i~vvGn~~~D~~~~~~~~~~------------------~~ 215 (403)
T 3ot5_A 163 RQLTGVMADIHFSPTKQAKENLLA---EGKDPA------TIFVTGNTAIDALKTTVQKDY------------------HH 215 (403)
T ss_dssp HHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHSCTTC------------------CC
T ss_pred HHHHHHhcCEEECCCHHHHHHHHH---cCCCcc------cEEEeCCchHHHHHhhhhhhc------------------ch
Confidence 4434 3589999999999999987 787765 89999884 564433222100 11
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCcc-ccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 466 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~-~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~ 466 (612)
..++++ + ++..++++.||.+. .|+++.+++|+..+.+ +++++++.+...+...+.++++... ..++.+.+..
T Consensus 216 ~~~~~l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~-~~~v~l~~~l 290 (403)
T 3ot5_A 216 PILENL--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGG-HERIHLIEPL 290 (403)
T ss_dssp HHHHSC--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTT-CTTEEEECCC
T ss_pred HHHHhc--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCC-CCCEEEeCCC
Confidence 233333 2 23356667778654 4789999999999865 7899988743223455666654322 2468777777
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCcceEEecccccccccCCCCCHHHHHH
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~ 545 (612)
...+...+++.||++|.+| |...+|||++|+|+|+. +.++..|.++.| +|+++ .+ |++++++
T Consensus 291 ~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv----------~~-d~~~l~~ 353 (403)
T 3ot5_A 291 DAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLI----------GT-NKENLIK 353 (403)
T ss_dssp CHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEEC----------CS-CHHHHHH
T ss_pred CHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEc----------CC-CHHHHHH
Confidence 7667788999999999887 55669999999999999 678888888766 78864 43 9999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
++.+++++ ++.+++|+++ ...|.....++++.+++.+.+.
T Consensus 354 ai~~ll~~--~~~~~~m~~~--~~~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 354 EALDLLDN--KESHDKMAQA--ANPYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHHHHHHC--HHHHHHHHHS--CCTTCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHcC--HHHHHHHHhh--cCcccCCcHHHHHHHHHHHHhC
Confidence 99999998 7777777664 3456777777788887777764
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2e-18 Score=184.69 Aligned_cols=160 Identities=15% Similarity=0.057 Sum_probs=120.8
Q ss_pred CCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
+..++++.|++. .++.+.+.++++.+.+.++++++++.+.. ..+.++ ..++++.+.+..+ ...+++.||++
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~l~----~~~~~v~~~~~~~---~~~~l~~ad~~ 312 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSL-DVSGLG----EVPANVRLESWVP---QAALLPHVDLV 312 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSC-CCTTCC----CCCTTEEEESCCC---HHHHGGGCSEE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCC-Chhhhc----cCCCcEEEeCCCC---HHHHHhcCcEE
Confidence 345778889986 77888888888887666788887776542 111111 2345687776663 45799999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCC----CcccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHHhhC
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATYG 555 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~~~~ 555 (612)
|.++ .+.+++|||++|+|+|+...+ +..+.+.+..+|+++ ++. |+++|+++|.+++++
T Consensus 313 v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~----------~~~~~~~~~l~~ai~~ll~~-- 376 (412)
T 3otg_A 313 VHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHL----------LPDNISPDSVSGAAKRLLAE-- 376 (412)
T ss_dssp EESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------CGGGCCHHHHHHHHHHHHHC--
T ss_pred EECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHHHHHHHHhC--
Confidence 9765 348999999999999996654 467788888899975 666 899999999999998
Q ss_pred HHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHH
Q 007212 556 TQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 556 ~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~ 586 (612)
++.+++|++.+ +.+.++|+.+++.+++++.+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 377 ESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 66666676655 56778999999999998754
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-17 Score=178.84 Aligned_cols=229 Identities=14% Similarity=0.057 Sum_probs=159.9
Q ss_pred HHHH-HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC-ccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 311 MKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 311 ~k~~-l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+.. -+.+|.+++.|+..++.+.+ .|++.+ ++.++.|. +|...+.+... ......+
T Consensus 159 ~r~~~~~~a~~~~~~se~~~~~l~~---~G~~~~------ki~vvGn~~~d~~~~~~~~~-------------~~~~~~~ 216 (396)
T 3dzc_A 159 NRKLTAALTQYHFAPTDTSRANLLQ---ENYNAE------NIFVTGNTVIDALLAVREKI-------------HTDMDLQ 216 (396)
T ss_dssp HHHHHHHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHH-------------HHCHHHH
T ss_pred HHHHHHHhcCEEECCCHHHHHHHHH---cCCCcC------cEEEECCcHHHHHHHhhhhc-------------ccchhhH
Confidence 3444 45789999999999999986 787765 89999985 44322211000 0000113
Q ss_pred HHHHHHhC-CCCCCCCcEEEEEccCc-cccCHHHHHHHHHhccc--CCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEE
Q 007212 389 EALQAEVG-LPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGV 463 (612)
Q Consensus 389 ~~l~~~~g-l~~~~~~~~i~~iGrl~-~~Kg~d~li~A~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~ 463 (612)
.++++++| ++.+ +..++++.+|.+ ..|+++.+++|+..+.+ +++++++. |.+ +...+.++++... ..++.+.
T Consensus 217 ~~~r~~lg~l~~~-~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~-~~~~~~l~~~~~~-~~~v~~~ 293 (396)
T 3dzc_A 217 ATLESQFPMLDAS-KKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN-PNVREPVNKLLKG-VSNIVLI 293 (396)
T ss_dssp HHHHHTCTTCCTT-SEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHTTT-CTTEEEE
T ss_pred HHHHHHhCccCCC-CCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC-hHHHHHHHHHHcC-CCCEEEe
Confidence 67788888 4433 224455566754 34789999999999865 78999886 544 3455666654322 2467777
Q ss_pred eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCcceEEecccccccccCCCCCHHH
Q 007212 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 542 (612)
......+...+|+.||++|.+| |.+++|||++|+|+|++ +.++..|++++| +++++ . .|+++
T Consensus 294 ~~lg~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv----------~-~d~~~ 356 (396)
T 3dzc_A 294 EPQQYLPFVYLMDRAHIILTDS-----GGIQEEAPSLGKPVLVMRETTERPEAVAAG-TVKLV----------G-TNQQQ 356 (396)
T ss_dssp CCCCHHHHHHHHHHCSEEEESC-----SGGGTTGGGGTCCEEECCSSCSCHHHHHHT-SEEEC----------T-TCHHH
T ss_pred CCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHcCCCEEEccCCCcchHHHHcC-ceEEc----------C-CCHHH
Confidence 6666556668999999999998 34449999999999999 678888998877 56653 3 48999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 543 VSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 543 la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+++++.+++++ ++.+++|++++ ..|.....++++.+++.
T Consensus 357 l~~ai~~ll~d--~~~~~~m~~~~--~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 357 ICDALSLLLTD--PQAYQAMSQAH--NPYGDGKACQRIADILA 395 (396)
T ss_dssp HHHHHHHHHHC--HHHHHHHHTSC--CTTCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHcC--HHHHHHHhhcc--CCCcCChHHHHHHHHHh
Confidence 99999999998 77788887653 45666677777766553
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.6e-15 Score=156.13 Aligned_cols=160 Identities=13% Similarity=0.053 Sum_probs=104.9
Q ss_pred cEEEEEccCccccCHHHHHHHHHhccc-CCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.++++.|++...+..+.+.++++.+.. .+++++++ |.+. .+ .+.+.....+.++...+ |.. .+..+|+.||++
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~--~~-~~~~~~~~~~~~~~v~~-f~~-dm~~~l~~aDlv 256 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH--AE-ITAERYRTVAVEADVAP-FIS-DMAAAYAWADLV 256 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT--HH-HHHHHHHHTTCCCEEES-CCS-CHHHHHHHCSEE
T ss_pred EEEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc--cc-cccceeccccccccccc-chh-hhhhhhccceEE
Confidence 355666788888888999999999865 45665543 4333 33 33333344554555444 333 355799999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCc--------ccceecCcceEEecccccccccCCC--CCHHHHHHHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRAL 551 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~~~~~~~~~~~~v~~--~d~~~la~~i~~ll 551 (612)
|.-+ -++++.|+|++|+|+|....+.. .+.+.+.+.|+++ +. .++++|+++|.+++
T Consensus 257 I~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l----------~~~~~~~~~L~~~i~~ll 322 (365)
T 3s2u_A 257 ICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL----------PQKSTGAAELAAQLSEVL 322 (365)
T ss_dssp EECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred EecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe----------ecCCCCHHHHHHHHHHHH
Confidence 9543 36889999999999998775432 2344555578765 43 36899999999999
Q ss_pred HhhCHHHHHHHHHHHHH--hhcCcHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNGMA--QDLSWKGPAKKWEETL 584 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y 584 (612)
+| ++.+++|++++.. .....+.+++.++++.
T Consensus 323 ~d--~~~~~~m~~~a~~~~~~~aa~~ia~~i~~la 355 (365)
T 3s2u_A 323 MH--PETLRSMADQARSLAKPEATRTVVDACLEVA 355 (365)
T ss_dssp HC--THHHHHHHHHHHHTCCTTHHHHHHHHHHHHC
T ss_pred CC--HHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 98 7788889888742 2233444444444433
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.6e-15 Score=159.72 Aligned_cols=161 Identities=13% Similarity=0.075 Sum_probs=112.0
Q ss_pred CCcEEEEEccCccccCHHHHHHHHHhccc-CCeEE-EEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
+.++++++|++. .++.+.+.++++.+.+ +++++ +++|.+... +.++ ..++++.+.+..+.. .+++.||
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~--~~l~----~~~~~v~~~~~~~~~---~~l~~ad 301 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP--AELG----ELPDNVEVHDWVPQL---AILRQAD 301 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CG--GGGC----SCCTTEEEESSCCHH---HHHTTCS
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh--HHhc----cCCCCeEEEecCCHH---HHhhccC
Confidence 346888999998 5666666555555544 57888 467876521 1121 245568777665544 5899999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~~ 553 (612)
++|..+- +++++|||++|+|+|+...++ ..+.+.+.+.|+.+ ++. |+++++++|.+++++
T Consensus 302 ~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~ 367 (430)
T 2iyf_A 302 LFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKL----------ATEEATADLLRETALALVDD 367 (430)
T ss_dssp EEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CCC-CCHHHHHHHHHHHHHC
T ss_pred EEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEc----------CCCCCCHHHHHHHHHHHHcC
Confidence 9997652 378999999999999998755 45666677789875 555 899999999999997
Q ss_pred hCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHH
Q 007212 554 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 554 ~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
++.++++++.+ +.+.++++.+++.+++++.+..
T Consensus 368 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 402 (430)
T 2iyf_A 368 --PEVARRLRRIQAEMAQEGGTRRAADLIEAELPARH 402 (430)
T ss_dssp --HHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC--
T ss_pred --HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhccc
Confidence 55555555554 3456799999998888776544
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-15 Score=162.37 Aligned_cols=153 Identities=14% Similarity=0.115 Sum_probs=101.0
Q ss_pred CCcEEEEEccCcccc----------CHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007212 402 NIPVIGFIGRLEEQK----------GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 402 ~~~~i~~iGrl~~~K----------g~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 471 (612)
..++++++|++...| .++.+++++..+ ++++++++.+.. .+.+. ..++++.+.+..+ .
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~---~ 294 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL--AQTLQ----PLPEGVLAAGQFP---L 294 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC--------------CCTTEEEESCCC---H
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc--hhhhc----cCCCcEEEeCcCC---H
Confidence 346788899996544 466677776665 789998887652 22222 3456788777654 3
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEE----cCCCCcccceecCcceEEecccccccccCCCC--CHHHHHH
Q 007212 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVST 545 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~ 545 (612)
..+++.||++|. ++-+.+++|||++|+|+|+ .+..+..+.+.+.+.|+++ ++. |+++|++
T Consensus 295 ~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~ 360 (398)
T 4fzr_A 295 SAIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEV----------PWEQAGVESVLA 360 (398)
T ss_dssp HHHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEEC----------C-------CHHH
T ss_pred HHHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHH
Confidence 468999999994 4447899999999999999 4555777888888899975 655 7899999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~ 582 (612)
+|.+++++ +..++++.+.+ +....+|+.+++.+++
T Consensus 361 ai~~ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 361 ACARIRDD--SSYVGNARRLAAEMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHHC--THHHHHHHHHHHHHTTSCCHHHHHHHHTC
T ss_pred HHHHHHhC--HHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 99999998 55566665554 5677899988887653
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.4e-14 Score=153.84 Aligned_cols=158 Identities=14% Similarity=0.134 Sum_probs=110.1
Q ss_pred CcEEEEEccCccccCH-HHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 403 IPVIGFIGRLEEQKGS-DILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~-d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
..++++.|++...|+. ..+++++.+..+ ++++++++|.+.. .+.+. ..+.++.+.+..+.. .+++.||+
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~ad~ 289 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH--RALLT----DLPDNARIAESVPLN---LFLRTCEL 289 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG--GGGCT----TCCTTEEECCSCCGG---GTGGGCSE
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc--hhhcc----cCCCCEEEeccCCHH---HHHhhCCE
Confidence 3567778998765433 555555544433 5899999987652 11121 235567766655443 36799999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEc----CCCCcccceecCcceEEecccccccccCCC----CCHHHHHHHHHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDP----VDVAAVSTTVRRALA 552 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~----~d~~~la~~i~~ll~ 552 (612)
+|.. +-+.+++|||++|+|+|+. +..+..+.+.+.+.|+++ ++ .|+++|+++|.++++
T Consensus 290 ~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~~~l~~ai~~ll~ 355 (391)
T 3tsa_A 290 VICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICL----------PDEQAQSDHEQFTDSIATVLG 355 (391)
T ss_dssp EEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEEC----------CSHHHHTCHHHHHHHHHHHHT
T ss_pred EEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEec----------CcccccCCHHHHHHHHHHHHc
Confidence 9953 4457999999999999994 445566778888899975 66 689999999999999
Q ss_pred hhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 553 ~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~ 585 (612)
+ +..++++.+.+ +....+++.+++.+++++.
T Consensus 356 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 356 D--TGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp C--THHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred C--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 8 45555555544 5677899988888776543
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.1e-13 Score=143.48 Aligned_cols=157 Identities=15% Similarity=0.064 Sum_probs=108.2
Q ss_pred CCcEEEEEccCcccc--CHHHHHHHHHhcccCCeEEEE-EecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 402 NIPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~i~~iGrl~~~K--g~d~li~A~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
...++++.|+....+ .+..+++++..+ ++++++ +|.+.. .+.++ ..+.++.+.+..+.. .+++.|
T Consensus 231 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~--~~~~~----~~~~~v~~~~~~~~~---~ll~~a 298 (402)
T 3ia7_A 231 APVLLVSLGNQFNEHPEFFRACAQAFADT---PWHVVMAIGGFLD--PAVLG----PLPPNVEAHQWIPFH---SVLAHA 298 (402)
T ss_dssp CCEEEEECCSCSSCCHHHHHHHHHHHTTS---SCEEEEECCTTSC--GGGGC----SCCTTEEEESCCCHH---HHHTTE
T ss_pred CCEEEEECCCCCcchHHHHHHHHHHHhcC---CcEEEEEeCCcCC--hhhhC----CCCCcEEEecCCCHH---HHHhhC
Confidence 346778889987654 345555555443 577666 455431 11111 245567776655544 689999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcC-----CCCcccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVAS-----TGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~-----~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll 551 (612)
|++|..+- ..+++|||++|+|+|+.. ..+..+.+.+.+.|..+ .++ |+++++++|.+++
T Consensus 299 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~~~~ll 364 (402)
T 3ia7_A 299 RACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL----------RPDQLEPASIREAVERLA 364 (402)
T ss_dssp EEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC----------CGGGCSHHHHHHHHHHHH
T ss_pred CEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc----------cCCCCCHHHHHHHHHHHH
Confidence 99997653 378899999999999544 44667777788889865 554 8999999999999
Q ss_pred HhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~ 586 (612)
++ ++.++++.+.+ +....+++..++.+++++.+
T Consensus 365 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 365 AD--SAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HC--HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 98 55555554443 45668888888888887764
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-13 Score=147.40 Aligned_cols=153 Identities=13% Similarity=0.091 Sum_probs=109.6
Q ss_pred CcEEEEEccCccc-cCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 403 IPVIGFIGRLEEQ-KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 403 ~~~i~~iGrl~~~-Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.++++++|++... ++.+.+.++++.+.+.++++++++++.. .+.+. ..+.++.+.+..+. ..+++.||++
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--~~~l~----~~~~~v~~~~~~~~---~~ll~~ad~~ 303 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--ISPLG----TLPRNVRAVGWTPL---HTLLRTCTAV 303 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--CGGGC----SCCTTEEEESSCCH---HHHHTTCSEE
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--hhhhc----cCCCcEEEEccCCH---HHHHhhCCEE
Confidence 4678889999655 4655565555555445899999987652 11111 34567877766643 3589999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEE----cCCCCcc--cceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLV--DTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~--e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~~ 553 (612)
|.. +-+.+++|||++|+|+|+ .+..+.. +.+.+.+.|+.+ ++. +.++++ +++++
T Consensus 304 v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~----------~~~~~~~~~l~----~ll~~ 365 (398)
T 3oti_A 304 VHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVS----------TSDKVDADLLR----RLIGD 365 (398)
T ss_dssp EEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEEC----------CGGGCCHHHHH----HHHHC
T ss_pred EEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEee----------CCCCCCHHHHH----HHHcC
Confidence 953 446799999999999999 6678888 888888899975 554 566666 77877
Q ss_pred hCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHH
Q 007212 554 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 554 ~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y 584 (612)
+..++++.+.+ +....+|+.+++.+++++
T Consensus 366 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 366 --ESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp --HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 55555565554 567889999998888765
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=4.3e-12 Score=135.63 Aligned_cols=157 Identities=14% Similarity=0.034 Sum_probs=106.4
Q ss_pred CCcEEEEEccCcccc--CHHHHHHHHHhcccCCeEEEE-EecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 402 NIPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~i~~iGrl~~~K--g~d~li~A~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
...++++.|++.... .+..+++++..+ ++++++ +|.+.. .+.++ ..+.++...+..+.. .+++.|
T Consensus 247 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~a 314 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQ---PWHVVMTLGGQVD--PAALG----DLPPNVEAHRWVPHV---KVLEQA 314 (415)
T ss_dssp CCEEEEECTTTSCCCHHHHHHHHHHHTTS---SCEEEEECTTTSC--GGGGC----CCCTTEEEESCCCHH---HHHHHE
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHhcC---CcEEEEEeCCCCC--hHHhc----CCCCcEEEEecCCHH---HHHhhC
Confidence 346778889986433 245555555444 588877 565431 11111 245567776555543 689999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEc----CCCCcccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 552 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~ 552 (612)
|++|..+- ..+++|||++|+|+|+. +.....+.+.+.+.|..+ ... ++++++++|.++++
T Consensus 315 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~ 380 (415)
T 3rsc_A 315 TVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVL----------PGEKADGDTLLAAVGAVAA 380 (415)
T ss_dssp EEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEEC----------CGGGCCHHHHHHHHHHHHT
T ss_pred CEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEc----------ccCCCCHHHHHHHHHHHHc
Confidence 99997642 36889999999999994 444566677777788865 544 89999999999999
Q ss_pred hhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 553 ~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~ 586 (612)
+ ++.++++.+.+ +....+++..++.+++++.+
T Consensus 381 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 381 D--PALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp C--HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 8 55555554443 45667888888888877654
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-11 Score=130.72 Aligned_cols=153 Identities=13% Similarity=0.109 Sum_probs=106.3
Q ss_pred CcEEEEEccCccc-------cCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007212 403 IPVIGFIGRLEEQ-------KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 403 ~~~i~~iGrl~~~-------Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 475 (612)
..++++.|++... +.++.+++++..+ ++++++++.+. ..+.++. .++++.. +..+. ..++
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~--~~~~l~~----~~~~v~~-~~~~~---~~~l 277 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPDT--VAEALRA----EVPQARV-GWTPL---DVVA 277 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCHH--HHHHHHH----HCTTSEE-ECCCH---HHHG
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCCC--CHHhhCC----CCCceEE-cCCCH---HHHH
Confidence 3688899999865 6788888888765 78888875432 2222322 3556776 55443 3588
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCC--CHHHHHHHHHH
Q 007212 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRR 549 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ 549 (612)
+.||++|..+ -+++++|||++|+|+|+...++ ..+.+.+.+.|+.+ ++. +.++++++|.+
T Consensus 278 ~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ 343 (384)
T 2p6p_A 278 PTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIAL----------LPGEDSTEAIADSCQE 343 (384)
T ss_dssp GGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTCCCHHHHHHHHHH
T ss_pred hhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEec----------CcCCCCHHHHHHHHHH
Confidence 9999999763 3468999999999999998743 56667676788865 543 79999999999
Q ss_pred HHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHH
Q 007212 550 ALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y 584 (612)
++++ ++.++++.+.+ +...-.-+..++.+++++
T Consensus 344 ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 344 LQAK--DTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHC--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHcC--HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 9998 55555555544 334445555665555544
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.4e-12 Score=136.77 Aligned_cols=194 Identities=20% Similarity=0.137 Sum_probs=136.0
Q ss_pred HHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC-ccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 312 KAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 312 k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+..+ ..+|.+++.|+..++.+.+ .|++.+ +|.++.|. +|...+. .....+.
T Consensus 140 R~~~~~~a~~~~~~te~~~~~l~~---~G~~~~------~I~vtGnp~~D~~~~~------------------~~~~~~~ 192 (385)
T 4hwg_A 140 RKIIDHISDVNITLTEHARRYLIA---EGLPAE------LTFKSGSHMPEVLDRF------------------MPKILKS 192 (385)
T ss_dssp HHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCSHHHHHHHH------------------HHHHHHC
T ss_pred HHHHHhhhceeecCCHHHHHHHHH---cCCCcC------cEEEECCchHHHHHHh------------------hhhcchh
Confidence 3343 4689999999999999987 787765 88888874 3422110 0112345
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCc---cccCHHHHHHHHHhcccC-CeEEEEEecCChhHHHHHHHH-H-HHCCCceEEE
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQL-E-ILYPEKARGV 463 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~---~~Kg~d~li~A~~~l~~~-~~~lvivG~g~~~~~~~l~~l-~-~~~~~~v~~~ 463 (612)
++++++|++. +..+++..||.+ ..|+++.+++|+..+.+. ++++++... +...+.++++ . .....++...
T Consensus 193 ~~~~~lgl~~--~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~ 268 (385)
T 4hwg_A 193 DILDKLSLTP--KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFL 268 (385)
T ss_dssp CHHHHTTCCT--TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEEC
T ss_pred HHHHHcCCCc--CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEE
Confidence 6788899874 335666777754 347899999999998643 777777543 3355555554 2 2112357766
Q ss_pred eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCcceEEecccccccccCCCCCHHH
Q 007212 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 542 (612)
..+.......+++.||+++.+| |.++.||+++|+|+|+.... +.+|.++.| +++++ +.|.++
T Consensus 269 ~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv-----------~~d~~~ 331 (385)
T 4hwg_A 269 PAFSFTDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMS-----------GFKAER 331 (385)
T ss_dssp CCCCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEEC-----------CSSHHH
T ss_pred cCCCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEc-----------CCCHHH
Confidence 6666666778999999999776 56789999999999998653 357777765 56643 358999
Q ss_pred HHHHHHHHHHh
Q 007212 543 VSTTVRRALAT 553 (612)
Q Consensus 543 la~~i~~ll~~ 553 (612)
+++++.+++++
T Consensus 332 i~~ai~~ll~d 342 (385)
T 4hwg_A 332 VLQAVKTITEE 342 (385)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhC
Confidence 99999999987
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.3e-10 Score=125.45 Aligned_cols=155 Identities=15% Similarity=0.090 Sum_probs=107.4
Q ss_pred CcEEEEEccCcc-----ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007212 403 IPVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 403 ~~~i~~iGrl~~-----~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 477 (612)
..++++.|++.. .+.++.+++++..+ ++++++.+.+.. . +.++ ..++++......+. ..++..
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~-~-~~l~----~~~~~v~~~~~~~~---~~ll~~ 335 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQ-L-EGVA----NIPDNVRTVGFVPM---HALLPT 335 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTT-T-SSCS----SCCSSEEECCSCCH---HHHGGG
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcc-h-hhhc----cCCCCEEEecCCCH---HHHHhh
Confidence 357888999875 48899999999876 788888765441 1 1111 24556776665554 257899
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll 551 (612)
||++|.. +-+.+++|||++|+|+|+....+ ..+.+.+.+.|+.+ +.. ++++++++|.+++
T Consensus 336 ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll 401 (441)
T 2yjn_A 336 CAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIAL----------PVPELTPDQLRESVKRVL 401 (441)
T ss_dssp CSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred CCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEc----------ccccCCHHHHHHHHHHHh
Confidence 9999963 34579999999999999998743 55666666788865 544 8999999999999
Q ss_pred HhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~ 585 (612)
++ +..++++.+.+ +....+++.+++.+++++.
T Consensus 402 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 402 DD--PAHRAGAARMRDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HC--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 98 55555555543 4566778888877776653
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.20 E-value=3.6e-09 Score=113.31 Aligned_cols=158 Identities=9% Similarity=0.002 Sum_probs=100.1
Q ss_pred CCcEEEEEccCccccCHHHHHHHHHhcccCCeEEE-EEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
+..++++.|++. .+..+.+.++++.+.+.+++++ ++|.+... +.+ ...++++......+.. .+++.||+
T Consensus 255 ~~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~--~~~----~~~~~~v~~~~~~~~~---~~l~~~d~ 324 (424)
T 2iya_A 255 RPVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP--ADL----GEVPPNVEVHQWVPQL---DILTKASA 324 (424)
T ss_dssp CCEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSCG--GGG----CSCCTTEEEESSCCHH---HHHTTCSE
T ss_pred CCEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCCh--HHh----ccCCCCeEEecCCCHH---HHHhhCCE
Confidence 346778889987 3444444444444444577875 45765421 111 1245567766655543 58999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHHhh
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATY 554 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~~~ 554 (612)
+|..+ -..+++|||++|+|+|+....+ ..+.+.+.+.|+.+ +.. +.++++++|++++++
T Consensus 325 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~- 389 (424)
T 2iya_A 325 FITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHI----------PRDQVTAEKLREAVLAVASD- 389 (424)
T ss_dssp EEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHHHHHC-
T ss_pred EEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHHcC-
Confidence 88642 2378999999999999997643 34455566678865 443 889999999999987
Q ss_pred CHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHH
Q 007212 555 GTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 555 ~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~ 585 (612)
++.++++.+.+ +......+..++.+++++.
T Consensus 390 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 390 -PGVAERLAAVRQEIREAGGARAAADILEGILA 421 (424)
T ss_dssp -HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 44444444433 3334455556666555543
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=3.9e-10 Score=119.53 Aligned_cols=153 Identities=16% Similarity=0.114 Sum_probs=90.7
Q ss_pred CcEEEEEccCcccc-CHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 403 IPVIGFIGRLEEQK-GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 403 ~~~i~~iGrl~~~K-g~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.++++..|++...+ +.+.+.+++..+.+.+.++++.+.+...- .....++++......+.. .++..||++
T Consensus 238 ~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~------~~~~~~~~v~~~~~~p~~---~lL~~~~~~ 308 (400)
T 4amg_A 238 RRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA------LLGELPANVRVVEWIPLG---ALLETCDAI 308 (400)
T ss_dssp CEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC------CCCCCCTTEEEECCCCHH---HHHTTCSEE
T ss_pred cEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc------ccccCCCCEEEEeecCHH---HHhhhhhhe
Confidence 35667788876544 44556666666666678887766543110 012245667766665543 478999998
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 557 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 557 (612)
|.- +-..+++|||++|+|+|+....+ ..+.+.+.+.|+.. +.. +..+++|++++++ +.
T Consensus 309 v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l----------~~~--~~~~~al~~lL~d--~~ 370 (400)
T 4amg_A 309 IHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDA----------EAG--SLGAEQCRRLLDD--AG 370 (400)
T ss_dssp EEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEEC----------CTT--TCSHHHHHHHHHC--HH
T ss_pred ecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEc----------CCC--CchHHHHHHHHcC--HH
Confidence 843 34568999999999999865433 44555555677754 333 3457889999998 33
Q ss_pred HHHHHHHH--HHHhhcCcHHHHHHHHH
Q 007212 558 ALAEMMKN--GMAQDLSWKGPAKKWEE 582 (612)
Q Consensus 558 ~~~~~~~~--~~~~~fsw~~~a~~~~~ 582 (612)
.++++.+- .++..=+....++.+++
T Consensus 371 ~r~~a~~l~~~~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 371 LREAALRVRQEMSEMPPPAETAAXLVA 397 (400)
T ss_dssp HHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 32222221 13333355555555554
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.7e-08 Score=107.61 Aligned_cols=125 Identities=13% Similarity=0.080 Sum_probs=86.1
Q ss_pred CcEEEEEccCc-cccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 403 IPVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 403 ~~~i~~iGrl~-~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.+++++.|++. ..+.++.+++++..+ ++++++.+.... .. . ...+.++......+.. .++..||++
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~-~~----~--~~~~~~v~~~~~~~~~---~ll~~~d~~ 288 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAG-LG----R--IDEGDDCLVVGEVNHQ---VLFGRVAAV 288 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTT-CC----C--SSCCTTEEEESSCCHH---HHGGGSSEE
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcc-cc----c--ccCCCCEEEecCCCHH---HHHhhCcEE
Confidence 46788889998 677788888888876 677777654321 10 0 1234567776655543 478999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCc----ccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
|..+- ..++.||+++|+|+|+....+- .+.+.+.+.|..+ .....+.++++++|.++++
T Consensus 289 v~~gG----~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l--------~~~~~~~~~l~~ai~~ll~ 351 (404)
T 3h4t_A 289 VHHGG----AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAH--------DGPTPTVESLSAALATALT 351 (404)
T ss_dssp EECCC----HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC--------SSSSCCHHHHHHHHHHHTS
T ss_pred EECCc----HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEecc--------CcCCCCHHHHHHHHHHHhC
Confidence 95542 3789999999999999865442 2345555677764 1122378999999999987
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.88 E-value=1.7e-08 Score=111.34 Aligned_cols=179 Identities=12% Similarity=0.122 Sum_probs=122.5
Q ss_pred HHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEE--EEecCC---hhHHHHHHHHHHHCCCceEEEec
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQII--VLGTGK---KPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lv--ivG~g~---~~~~~~l~~l~~~~~~~v~~~~~ 465 (612)
..++++.+.+.++++..+++ .|..+.+++++.++.+ |+..++ ++|.+. ....+++.+.... +++.+.+.
T Consensus 431 ~~~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~--~Rv~F~g~ 506 (631)
T 3q3e_A 431 VDYLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLG--DSATAHPH 506 (631)
T ss_dssp CCCCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHG--GGEEEECC
T ss_pred ccccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCC--ccEEEcCC
Confidence 34567754445778888875 7889999999998876 665553 357432 2333344444433 46888888
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCccccee------cCcceEEecccccccccCCCCC
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~------~g~~G~~~~~~~~~~~~v~~~d 539 (612)
.+.++....++.+|+++-|+.+++ |++.+|||++|+|||+....++..-+. -|..+++ -..|
T Consensus 507 ~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~L-----------IA~d 574 (631)
T 3q3e_A 507 SPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWL-----------IANT 574 (631)
T ss_dssp CCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGG-----------EESS
T ss_pred CCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcce-----------ecCC
Confidence 887777789999999999998755 999999999999999977665554432 1223321 1257
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHh---hcCcHHHHHHHHHHHHHHHH
Q 007212 540 VAAVSTTVRRALATYGTQALAEMMKNGMAQ---DLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 540 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~fsw~~~a~~~~~~y~~l~~ 589 (612)
.++.++...++.+| ++.+.+++++.... ..-|+...++|++.|+++..
T Consensus 575 ~eeYv~~Av~La~D--~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 575 VDEYVERAVRLAEN--HQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHHHHHHHHHHHC--HHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--HHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHH
Confidence 89999999999998 77777776665322 11222445666666665554
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.79 E-value=3.4e-08 Score=91.81 Aligned_cols=122 Identities=10% Similarity=0.052 Sum_probs=93.3
Q ss_pred CcEEEEEccCc---cccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--Hh
Q 007212 403 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AG 477 (612)
Q Consensus 403 ~~~i~~iGrl~---~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~ 477 (612)
..++++.|++. +.|.++.+++++..+ +.++++++.+... ...+.++.+.+..+... ++ +.
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~---------~~~~~~v~~~~~~~~~~---~l~~~~ 86 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKP---------DTLGLNTRLYKWIPQND---LLGHPK 86 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCC---------TTCCTTEEEESSCCHHH---HHTSTT
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCc---------ccCCCcEEEecCCCHHH---HhcCCC
Confidence 46888999985 778888999998776 5788887765421 12455687777666543 45 99
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC----CcccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll 551 (612)
||++|.. +-+.+++|||++|+|+|+.... +..+.+.+...|+.+ ++. +.++++++|.+++
T Consensus 87 ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 87 TRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRV----------DFNTMSSTDLLNALKRVI 152 (170)
T ss_dssp EEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred cCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEe----------ccccCCHHHHHHHHHHHH
Confidence 9999964 3468999999999999999874 345667777789875 555 8899999999999
Q ss_pred Hh
Q 007212 552 AT 553 (612)
Q Consensus 552 ~~ 553 (612)
++
T Consensus 153 ~~ 154 (170)
T 2o6l_A 153 ND 154 (170)
T ss_dssp HC
T ss_pred cC
Confidence 87
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.72 E-value=9.4e-07 Score=94.26 Aligned_cols=155 Identities=12% Similarity=0.051 Sum_probs=100.2
Q ss_pred CcEEEEEccCc---cccCHHHHHHHHHhcccCCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 403 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~i~~iGrl~---~~Kg~d~li~A~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
..++++.|++. ..+.++.++++++.+ +++++++ |.++.. . ...++++......+. ..++..|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~---~~ll~~~ 303 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTELV----L----PDDRDDCFAIDEVNF---QALFRRV 303 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTCC----C----SCCCTTEEEESSCCH---HHHGGGS
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCcccc----c----cCCCCCEEEeccCCh---HHHhccC
Confidence 36788899985 567788888888776 5677665 655421 1 234556776665553 3578999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
|++|.- +-..+++||+++|+|+|+....+ ..+.+.+.+.|+.+. ....+.++++++|.++ ++
T Consensus 304 d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~--------~~~~~~~~l~~~i~~l-~~- 369 (416)
T 1rrv_A 304 AAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHD--------GPTPTFESLSAALTTV-LA- 369 (416)
T ss_dssp SEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECS--------SSCCCHHHHHHHHHHH-TS-
T ss_pred CEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCC--------CCCCCHHHHHHHHHHh-hC-
Confidence 999963 23469999999999999976533 444565666788641 1235789999999999 76
Q ss_pred CHHHHHHHHHHHHHhhcCcHHHHHHHHHHH-HHHHH
Q 007212 555 GTQALAEMMKNGMAQDLSWKGPAKKWEETL-LNLEV 589 (612)
Q Consensus 555 ~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y-~~l~~ 589 (612)
++.++++.+.+ +.+.-..-+ +..+.+ +.+..
T Consensus 370 -~~~~~~~~~~~--~~~~~~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 370 -PETRARAEAVA--GMVLTDGAA-AAADLVLAAVGR 401 (416)
T ss_dssp -HHHHHHHHHHT--TTCCCCHHH-HHHHHHHHHHHC
T ss_pred -HHHHHHHHHHH--HHHhhcCcH-HHHHHHHHHHhc
Confidence 44444444332 233333333 555555 55543
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.15 E-value=1.1e-05 Score=86.02 Aligned_cols=155 Identities=17% Similarity=0.087 Sum_probs=105.5
Q ss_pred CcEEEEEccC-ccccCHHHHHHHHHhcccCCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 403 IPVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~i~~iGrl-~~~Kg~d~li~A~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
..++++.|++ ...+..+.++++++.+ +.+++++ |.+... . ...++++......+.. .++..||+
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~~---~~l~~~d~ 304 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLV----L----PDDGADCFAIGEVNHQ---VLFGRVAA 304 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCC----C----SSCGGGEEECSSCCHH---HHGGGSSE
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCccc----c----cCCCCCEEEeCcCChH---HHHhhCCE
Confidence 3688889999 5888999999999887 4566665 655421 0 1234457666555543 46899999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCC--CCHHHHHHHHHHHHHhh
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRALATY 554 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~--~d~~~la~~i~~ll~~~ 554 (612)
+|..+ -..+++|||++|+|+|+....+ ..+.+.+.+.|+.+ +. .+.++++++|.++ ++
T Consensus 305 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~l-~~- 368 (415)
T 1iir_A 305 VIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH----------DGPIPTFDSLSAALATA-LT- 368 (415)
T ss_dssp EEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------SSSSCCHHHHHHHHHHH-TS-
T ss_pred EEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccC----------CcCCCCHHHHHHHHHHH-cC-
Confidence 99643 2369999999999999987644 44556666678865 33 4889999999999 76
Q ss_pred CHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 555 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 555 ~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++.++++.+. .+.+....-+++..+.+++++..
T Consensus 369 -~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 369 -PETHARATAV--AGTIRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp -HHHHHHHHHH--HHHSCSCHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHH--HHHHhhcChHHHHHHHHHHHHhc
Confidence 4444444333 33455666777777777777643
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0022 Score=66.07 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=74.6
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcc-CccccCHH--HHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCC----Cce
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGR-LEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP----EKA 460 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGr-l~~~Kg~d--~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~----~~v 460 (612)
.+.+++.+|+..+ +..+++..|. ..+.|.+. .+.++++.|.+.+++++++|... ..+..+++....+ .++
T Consensus 167 ~~~~~~~~~~~~~-~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~--e~~~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 167 KSYTCNQFSLSSE-RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWC 243 (348)
T ss_dssp HHHHHHHTTCCSS-SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG--GHHHHHHHHTTSCHHHHTTE
T ss_pred HHHHHHHhCCCCC-CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChh--hHHHHHHHHHhhhhccccce
Confidence 4556777787533 2345666776 55667654 88888888876689999988654 2344455544332 124
Q ss_pred E-EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 461 R-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 461 ~-~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
. ..+..+-.++..+++.||++|-.. .|..-+ |.++|+|+|+-
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 3 334456677778999999999875 345444 99999999875
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0023 Score=72.95 Aligned_cols=182 Identities=13% Similarity=-0.020 Sum_probs=123.0
Q ss_pred HHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC---CceEEEecc
Q 007212 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 466 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~v~~~~~~ 466 (612)
|+.+|||.+. ++++++.+ ..|=-+..++++.++.+ |+.+|++..... ..++.+++...+.+ +++.+....
T Consensus 514 R~~~gLp~~~--v~f~~fN~--~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~-~~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 514 RSQYGLPEDA--IVYCNFNQ--LYKIDPSTLQMWANILKRVPNSVLWLLRFPA-VGEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp GGGGTCCTTS--EEEECCSC--GGGCCHHHHHHHHHHHHHCSSEEEEEEETTG-GGHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred hhhcCCCCCC--EEEEeCCc--cccCCHHHHHHHHHHHHhCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCcCeEEECCCC
Confidence 6678998653 55555544 46666777777777765 899999887654 33455555555543 578888877
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---cceEEecccccccccCCCCCHHHH
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---FTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---~~G~~~~~~~~~~~~v~~~d~~~l 543 (612)
+.++.-..+..+|+++=|.-+ +-+.+.+||+.+|+|||+-....+..=+... ..|+- ++ -..|.++.
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~--------e~-ia~~~~~Y 658 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCL--------EL-IAKNRQEY 658 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCG--------GG-BCSSHHHH
T ss_pred CHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCc--------cc-ccCCHHHH
Confidence 776666789999999987665 4589999999999999987633222211100 01110 11 23678888
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHH---H--HhhcCcHHHHHHHHHHHHHHHHc
Q 007212 544 STTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 544 a~~i~~ll~~~~~~~~~~~~~~~---~--~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
.+...++..+ .+.+.++..+- + ..-|+-+..++.+++.|+++...
T Consensus 659 ~~~a~~la~d--~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 659 EDIAVKLGTD--LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 8888888888 44444443332 2 24588999999999999999865
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0043 Score=64.33 Aligned_cols=111 Identities=13% Similarity=0.128 Sum_probs=73.9
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCH--HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceE-EEecc
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR-GVAKF 466 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~--d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~-~~~~~ 466 (612)
.+.++.|++.++ ..+.+..|.-.+.|.+ +.+.+++..+.+.+.+++++|... .++..+++....+.++. ..+..
T Consensus 174 ~~l~~~g~~~~~-~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~--e~~~~~~i~~~~~~~~~~l~g~~ 250 (349)
T 3tov_A 174 EFYSSHGLTDTD-ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPM--DLEMVQPVVEQMETKPIVATGKF 250 (349)
T ss_dssp HHHHHTTCCTTC-CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTT--THHHHHHHHHTCSSCCEECTTCC
T ss_pred HHHHHcCCCCCC-CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcc--hHHHHHHHHHhcccccEEeeCCC
Confidence 344566775432 2445556654556654 678888888866688988888654 34455666555543333 33455
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+-.++..+++.||++|-.- .|..-+ |.++|+|+|+-=
T Consensus 251 sl~e~~ali~~a~~~i~~D----sG~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 251 QLGPLAAAMNRCNLLITND----SGPMHV-GISQGVPIVALY 287 (349)
T ss_dssp CHHHHHHHHHTCSEEEEES----SHHHHH-HHTTTCCEEEEC
T ss_pred CHHHHHHHHHhCCEEEECC----CCHHHH-HHhcCCCEEEEE
Confidence 6677778999999999763 356666 899999999853
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.084 Score=52.79 Aligned_cols=94 Identities=12% Similarity=0.043 Sum_probs=61.4
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
.++++.|..+...-.+.+++++... .. -.++.|.+.+. .+.+++...+.+ ++.... |.. .+..+|+.||++|.
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~--~~-i~vv~G~~~~~-~~~l~~~~~~~~-~v~v~~-~~~-~m~~~m~~aDlvI~ 231 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT--KI-ISIATSSSNPN-LKKLQKFAKLHN-NIRLFI-DHE-NIAKLMNESNKLII 231 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT--SC-EEEEECTTCTT-HHHHHHHHHTCS-SEEEEE-SCS-CHHHHHHTEEEEEE
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC--CC-EEEEECCCchH-HHHHHHHHhhCC-CEEEEe-CHH-HHHHHHHHCCEEEE
Confidence 4667788776655444555555443 23 34566877653 455555555444 465443 333 35579999999997
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCC
Q 007212 484 PSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+ .|.++.|++++|+|.|.-..
T Consensus 232 ~-----gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 232 S-----ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp E-----SSHHHHHHHHTTCCEEEECC
T ss_pred C-----CcHHHHHHHHcCCCEEEEeC
Confidence 3 46899999999999987653
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=95.00 E-value=0.16 Score=54.38 Aligned_cols=135 Identities=14% Similarity=0.014 Sum_probs=80.1
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
..+++..|.+... ..+.+.+.+..+.+.+.+++++-.+.. .+..-+....+.++++....+.+. . .+++++++.+
T Consensus 274 ~vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~~~-~~~lp~~~~~~~~~~~~vv~w~Pq-~--~vL~h~~v~~ 348 (454)
T 3hbf_A 274 SVVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRGDP-KEKLPKGFLERTKTKGKIVAWAPQ-V--EILKHSSVGV 348 (454)
T ss_dssp CEEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCSCH-HHHSCTTHHHHTTTTEEEESSCCH-H--HHHHSTTEEE
T ss_pred ceEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCCcc-hhcCCHhHHhhcCCceEEEeeCCH-H--HHHhhcCcCe
Confidence 3566777877532 234444444444444677776543331 111111122233455666654444 2 5899999655
Q ss_pred EcCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecC-cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 483 IPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 483 ~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+-++ +| .+++||+++|+|+|+-...+ ....+.+. +.|..+. -..-+.+++.++|++++++
T Consensus 349 fvtH---~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~--------~~~~~~~~l~~av~~ll~~ 414 (454)
T 3hbf_A 349 FLTH---SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD--------NGVLTKESIKKALELTMSS 414 (454)
T ss_dssp EEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG--------GGSCCHHHHHHHHHHHHSS
T ss_pred EEec---CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec--------CCCCCHHHHHHHHHHHHCC
Confidence 5555 55 57999999999999986532 23344453 6777641 0124789999999999976
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=94.56 E-value=0.15 Score=54.67 Aligned_cols=132 Identities=11% Similarity=-0.042 Sum_probs=76.1
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEE-ecCCh-hHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hc
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GA 478 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lviv-G~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~a 478 (612)
..+++..|.+... ..+.+.+.+..+.+.+.+++++ |.... .+.+.+. ...++++......+.. .+++ ++
T Consensus 272 ~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~---~~~~~~~~v~~w~pq~---~vL~h~~~ 344 (456)
T 2c1x_A 272 SVVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFL---EKTRGYGMVVPWAPQA---EVLAHEAV 344 (456)
T ss_dssp CEEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHH---HHHTTTEEEESCCCHH---HHHTSTTE
T ss_pred ceEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHH---hhcCCceEEecCCCHH---HHhcCCcC
Confidence 3566777877543 3344444444443345666554 43221 1111111 1123456655444442 4788 66
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecC-cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|++|. + +=.++++||+++|+|+|+-...+ ....+.+. +.|..+. -..-+.++++++|++++++
T Consensus 345 ~~fvt--h--~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~--------~~~~~~~~l~~~i~~ll~~ 412 (456)
T 2c1x_A 345 GAFVT--H--CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE--------GGVFTKSGLMSCFDQILSQ 412 (456)
T ss_dssp EEEEE--C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG--------GGSCCHHHHHHHHHHHHHS
T ss_pred CEEEe--c--CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec--------CCCcCHHHHHHHHHHHHCC
Confidence 77773 2 23468999999999999986532 23344455 6777541 0123689999999999987
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=93.45 E-value=0.77 Score=49.34 Aligned_cols=133 Identities=6% Similarity=-0.099 Sum_probs=77.1
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-----h-hHHHHHHHHHHHCCCceEEEeccChHHHHHHHH
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-----K-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-----~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~ 476 (612)
..+++..|.+.. ...+.+.+.+..|.+.+.+++++-... . .+.+.+. ...++++......+. . .+++
T Consensus 296 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~---~~~~~~~~v~~~~pq-~--~~L~ 368 (482)
T 2pq6_A 296 SVVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFT---NEIADRGLIASWCPQ-D--KVLN 368 (482)
T ss_dssp CEEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHH---HHHTTTEEEESCCCH-H--HHHT
T ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHH---HhcCCCEEEEeecCH-H--HHhc
Confidence 356677777642 233444444444444577877663321 0 0112221 223455666554443 3 4887
Q ss_pred hccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----ccccee-cCcceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 477 ~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
++++-++-++ +=.++++||+++|+|+|+-...+ ....+. +-+.|..+. ..-+.+++.++|++++
T Consensus 369 h~~~~~~vth--~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~---------~~~~~~~l~~~i~~ll 437 (482)
T 2pq6_A 369 HPSIGGFLTH--CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID---------TNVKREELAKLINEVI 437 (482)
T ss_dssp STTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC---------SSCCHHHHHHHHHHHH
T ss_pred CCCCCEEEec--CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC---------CCCCHHHHHHHHHHHH
Confidence 7666333343 22458999999999999987543 223332 445677541 2347899999999999
Q ss_pred Hh
Q 007212 552 AT 553 (612)
Q Consensus 552 ~~ 553 (612)
++
T Consensus 438 ~~ 439 (482)
T 2pq6_A 438 AG 439 (482)
T ss_dssp TS
T ss_pred cC
Confidence 87
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=93.26 E-value=0.58 Score=53.13 Aligned_cols=230 Identities=11% Similarity=0.073 Sum_probs=119.4
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCC--CcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ--EWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
.....|.+++.|+...+.+.+. ++.+.+ .++.-|..-. .+... .....++.+
T Consensus 475 ~~~~~D~~~~~s~~~~~~~~~~--f~~~~~--------~i~~~G~PR~D~l~~~~----------------~~~~~~~~~ 528 (729)
T 3l7i_A 475 ETSRWDYLISPNRYSTEIFRSA--FWMDEE--------RILEIGYPRNDVLVNRA----------------NDQEYLDEI 528 (729)
T ss_dssp HHTTCSEEEESSHHHHHHHHHH--TCCCGG--------GEEESCCGGGHHHHHST----------------TCHHHHHHH
T ss_pred hhccCCEEEeCCHHHHHHHHHH--hCCCcc--------eEEEcCCCchHHHhccc----------------chHHHHHHH
Confidence 3456899999999999888752 555432 2344454211 01010 112336678
Q ss_pred HHHhCCCCCCCCcEEEEEccCcccc----C-----HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 392 QAEVGLPVDRNIPVIGFIGRLEEQK----G-----SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~iGrl~~~K----g-----~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
+++++++. ++++|+|.-.+.... | +..-++.+.+....+..+++-. .+.+.+.+. + ..+.+.+..
T Consensus 529 ~~~~~~~~--~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~--Hp~~~~~~~-~-~~~~~~~~~ 602 (729)
T 3l7i_A 529 RTHLNLPS--DKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRM--HYLISNALD-L-SGYENFAID 602 (729)
T ss_dssp HHHTTCCS--SCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECC--CHHHHTTCC-C-TTCTTTEEE
T ss_pred HHHhCCCC--CCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEEec--Ccchhcccc-c-cccCCcEEe
Confidence 89999875 458999998776531 1 1112333333223466666533 222111110 0 112333433
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHH
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 542 (612)
...+ +.+.+++..||++|- -++-+++|++..++|||.-... ..+.. +...|+.+. +..+.--.-..|.++
T Consensus 603 ~~~~--~di~~ll~~aD~lIT-----DySSv~fD~~~l~kPiif~~~D-~~~Y~-~~~rg~y~d-~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 603 VSNY--NDVSELFLISDCLIT-----DYSSVMFDYGILKRPQFFFAYD-IDKYD-KGLRGFYMN-YMEDLPGPIYTEPYG 672 (729)
T ss_dssp CTTC--SCHHHHHHTCSEEEE-----SSCTHHHHHGGGCCCEEEECTT-TTTTT-SSCCSBSSC-TTSSSSSCEESSHHH
T ss_pred CCCC--cCHHHHHHHhCEEEe-----echHHHHhHHhhCCCEEEecCC-HHHHh-hccCCcccC-hhHhCCCCeECCHHH
Confidence 3332 245578999999992 2678899999999999976321 11211 112344321 100000001268899
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcH--HHHHHHHHHHHHH
Q 007212 543 VSTTVRRALATYGTQALAEMMKNGMAQDLSWK--GPAKKWEETLLNL 587 (612)
Q Consensus 543 la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~--~~a~~~~~~y~~l 587 (612)
|.++|+..... .....+..++...+-+.++ +.+++..+.+.+.
T Consensus 673 L~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~ 717 (729)
T 3l7i_A 673 LAKELKNLDKV--QQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKD 717 (729)
T ss_dssp HHHHHTTHHHH--HHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHH
T ss_pred HHHHHhhhhcc--chhHHHHHHHHHHHhCCccCChHHHHHHHHHHhc
Confidence 99999888764 2233333333333333333 4555555544433
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=92.47 E-value=1.7 Score=46.73 Aligned_cols=140 Identities=10% Similarity=-0.023 Sum_probs=77.0
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEe-cCC-------------hhHHHHH-HHHHHHCCCceEEEeccC
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLG-TGK-------------KPMEKQL-EQLEILYPEKARGVAKFN 467 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG-~g~-------------~~~~~~l-~~l~~~~~~~v~~~~~~~ 467 (612)
..+++..|.+.. ...+.+.+.+..+.+.+.+++++- .+. ..+...+ ....++..++-..+..+-
T Consensus 269 ~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~ 347 (480)
T 2vch_A 269 SVLYVSFGSGGT-LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWA 347 (480)
T ss_dssp CEEEEECTTTCC-CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCC
T ss_pred ceEEEecccccC-CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCcc
Confidence 367777888753 344555555555544577777653 321 0010000 001111111113333243
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccce-ecCcceEEecccccccccCCCCCHH
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~~~~~~~~~~~~v~~~d~~ 541 (612)
.+. .+++++++.++-++ +| .+++||+++|+|+|+-...+ ....+ ++-+.|..+.... + ..-+.+
T Consensus 348 Pq~--~vL~h~~v~~fvtH---gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~-~----~~~~~~ 417 (480)
T 2vch_A 348 PQA--QVLAHPSTGGFLTH---CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD-D----GLVRRE 417 (480)
T ss_dssp CHH--HHHHSTTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCT-T----SCCCHH
T ss_pred CHH--HHhCCCCcCeEEec---ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeeccc-C----CccCHH
Confidence 333 58999996444444 44 57999999999999987532 23333 4555677431000 0 024789
Q ss_pred HHHHHHHHHHHh
Q 007212 542 AVSTTVRRALAT 553 (612)
Q Consensus 542 ~la~~i~~ll~~ 553 (612)
+++++|++++++
T Consensus 418 ~l~~av~~vl~~ 429 (480)
T 2vch_A 418 EVARVVKGLMEG 429 (480)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHhcC
Confidence 999999999973
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=91.07 E-value=2.2 Score=45.47 Aligned_cols=137 Identities=11% Similarity=0.064 Sum_probs=75.9
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcc
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GAD 479 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aD 479 (612)
..+++..|.+...-+.+.+.+++..|.+.+.+++++-... ..+.+.+.+.... ++++.... |-.+. .+++ ++|
T Consensus 277 ~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~v~~-w~pq~--~vL~h~~~~ 352 (463)
T 2acv_A 277 SVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL-EGKGMICG-WAPQV--EVLAHKAIG 352 (463)
T ss_dssp CEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH-HCSEEEES-SCCHH--HHHHSTTEE
T ss_pred ceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc-CCCEEEEc-cCCHH--HHhCCCccC
Confidence 3567777887632343444444444444467777654322 1111111111100 23455444 43333 3676 577
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccc-eecCcceEEec-ccccccccCC--CCCHHHHHHHHHHHH
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMG-SFSVDCEAVD--PVDVAAVSTTVRRAL 551 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~-v~~g~~G~~~~-~~~~~~~~v~--~~d~~~la~~i~~ll 551 (612)
++|.-. =.++++||+++|+|+|+-...+ .... +++-+.|..+. .+. -. .-+.+++.++|++++
T Consensus 353 ~fvth~----G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~-----~~~~~~~~~~l~~ai~~ll 423 (463)
T 2acv_A 353 GFVSHC----GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR-----KGSDVVAAEEIEKGLKDLM 423 (463)
T ss_dssp EEEECC----CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC-----TTCCCCCHHHHHHHHHHHT
T ss_pred eEEecC----CchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccC-----CCCccccHHHHHHHHHHHH
Confidence 777322 2468999999999999987532 2334 45556777531 000 01 347899999999999
Q ss_pred H
Q 007212 552 A 552 (612)
Q Consensus 552 ~ 552 (612)
+
T Consensus 424 ~ 424 (463)
T 2acv_A 424 D 424 (463)
T ss_dssp C
T ss_pred h
Confidence 6
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=89.32 E-value=1.8 Score=43.42 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=66.0
Q ss_pred cEEEEEccCccccCH--HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~--d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.+++..|.=.+.|.+ +.+.+.+..|.+.++++++.+.++ ...+..+++....+. +...+..+-.++..+++.||++
T Consensus 180 ~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~-~e~~~~~~i~~~~~~-~~l~g~~sl~el~ali~~a~l~ 257 (326)
T 2gt1_A 180 YAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP-HEEERAKRLAEGFAY-VEVLPKMSLEGVARVLAGAKFV 257 (326)
T ss_dssp EEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH-HHHHHHHHHHTTCTT-EEECCCCCHHHHHHHHHTCSEE
T ss_pred EEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH-HHHHHHHHHHhhCCc-ccccCCCCHHHHHHHHHhCCEE
Confidence 455666655556654 588888888876788988873333 233445555554443 5555566677778899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
|-.-. |..=+ |.+.|+|+|+-
T Consensus 258 I~~DS----G~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 258 VSVDT----GLSHL-TAALDRPNITV 278 (326)
T ss_dssp EEESS----HHHHH-HHHTTCCEEEE
T ss_pred EecCC----cHHHH-HHHcCCCEEEE
Confidence 96643 56656 77799999875
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=85.26 E-value=0.82 Score=43.87 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=28.9
Q ss_pred HHHHHHH-hccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC
Q 007212 470 LAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 510 (612)
Q Consensus 470 ~~~~i~~-~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g 510 (612)
.+..+++ .||++|.- +=..+++|++++|+|.|+-...
T Consensus 124 ~m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 124 KMQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp SHHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECCS
T ss_pred hHHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcCc
Confidence 3446899 99999943 3357899999999999876543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 612 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 1e-101 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 2e-37 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-08 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 2e-08 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 314 bits (805), Expect = e-101
Identities = 161/500 (32%), Positives = 238/500 (47%), Gaps = 34/500 (6%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKV 145
N+L V +E+ P KTGGL DV+G LP AL A+G R T+ P Y K A V
Sbjct: 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFT 61
Query: 146 GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQ 205
EK +D + +D P + + G Y +TG+DY DN RF+ L
Sbjct: 62 DLLGEKADLLEVQHERLDLLILDAPAYYERSGG-----PYLGQTGKDYPDNWKRFAALSL 116
Query: 206 AALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 265
AA + G + + A+DW ++ P Y++ P+ +
Sbjct: 117 AAARIGAGV----------LPGWRPDMVHAHDWQAAMTPVYMRYAETPE-----IPSLLT 161
Query: 266 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325
IHNIA+QG+F F L LPA G ++++K G+ + + TVS
Sbjct: 162 IHNIAFQGQFGANIFSKLALPAHA-------FGMEGIEYYNDVSFLKGGLQTATALSTVS 214
Query: 326 PHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA 383
P YA+E+++ E G+ L+ +I R + GIVNG+D WNP TD I Y A +
Sbjct: 215 PSYAEEILTAE-FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSA-ANLKN 272
Query: 384 KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 443
+ L K+A+ + D P+ I RL QKG D++A A+ + +++VLG G
Sbjct: 273 RALNKKAVAEHFRID-DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDV 331
Query: 444 PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 503
+E L + + +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +
Sbjct: 332 ALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCI 391
Query: 504 PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEM 562
P+VA TGGL DTV + + PV + + +RR + Y L +M
Sbjct: 392 PVVARTGGLADTVIDANHAALASK-AATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQM 450
Query: 563 MKNGMAQDLSWKGPAKKWEE 582
K GM D+SW+ A +
Sbjct: 451 QKLGMKSDVSWEKSAGLYAA 470
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 142 bits (358), Expect = 2e-37
Identities = 101/503 (20%), Positives = 179/503 (35%), Gaps = 87/503 (17%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKV 145
+L +G E P K GGL + L + ALA+ GH V+ P + +++ + +V
Sbjct: 2 KVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKI----RV 56
Query: 146 GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQ 205
+ +V+ + + + + ++ +YGP + + +
Sbjct: 57 FGEEVQVKVSYEERGNLRIYRIGGGLLDSE-------DVYGP----GWDGLIRKAVTFGR 105
Query: 206 AALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 265
A++ L V +DWHT +K +K VF
Sbjct: 106 ASVLLLNDLLREEPLPD---------VVHFHDWHTVFAGALIKKYFKI-------PAVFT 149
Query: 266 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325
IH + AF + G ++ I+ G +D+V TVS
Sbjct: 150 IHRLNKSKLPAF---------------YFHEAGLSELAPYPDIDPEHTGGYIADIVTTVS 194
Query: 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 385
Y + + I + NG+D WN S + ++
Sbjct: 195 RGYLIDEWG--------FFRNFEGKITYVFNGIDCSFWNE------------SYLTGSRD 234
Query: 386 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL----AAAIPHFIKENVQIIVLGTG 441
K++L ++ G+ IG R QKG D+L + ++ I++G G
Sbjct: 235 ERKKSLLSKFGMDEGVTFMFIGRFDR--GQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG 292
Query: 442 KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG 501
+E LE + + + DF++IPS FEP GL+ L AM G
Sbjct: 293 DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 352
Query: 502 TVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561
+PI ++ GGL D + TG V D ++ + +AL L++
Sbjct: 353 AIPIASAVGGLRDIITNE-TGI----------LVKAGDPGELANAILKALELS-RSDLSK 400
Query: 562 MMKNG--MAQDLSWKGPAKKWEE 582
+N A SW+ A+++ +
Sbjct: 401 FRENCKKRAMSFSWEKSAERYVK 423
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 55.3 bits (132), Expect = 1e-08
Identities = 45/377 (11%), Positives = 98/377 (25%), Gaps = 85/377 (22%)
Query: 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 296
D+H L+ + ++ F +H F + F
Sbjct: 130 DYHLLPFAHELRKRGV------NNRIGFFLHI-------------------PFPTPEIFN 164
Query: 297 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356
P + + + + D++ + + + + K+
Sbjct: 165 ---ALPTY----DTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AW 214
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 416
G + IG++ A PL + Q + +N+ I + RL+ K
Sbjct: 215 GKAFRTEVY----PIGIEPKEIAKQAAGPLPPKLAQLK---AELKNVQNIFSVERLDYSK 267
Query: 417 GSDILAAAIPHFIKENVQI---IVLGTGKKPMEKQLEQLEILYPEKARGVAKFN------ 467
G A +++ Q I ++ + + + + N
Sbjct: 268 GLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQL 327
Query: 468 -------------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVAST 509
L I +D L+ + L+ + V +++
Sbjct: 328 GWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 387
Query: 510 GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQ 569
G + + V+P D V+ + RAL T +
Sbjct: 388 AGAANELTSALI-------------VNPYDRDEVAAALDRAL-TMSLAERISRHAEMLDV 433
Query: 570 DLSWKGPAKKWEETLLN 586
K W+E ++
Sbjct: 434 --IVKNDINHWQECFIS 448
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 52.1 bits (123), Expect = 2e-08
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 32/222 (14%)
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE-Q 415
G+D WN S + ++ K++L ++ G+ FIGR + Q
Sbjct: 1 GIDCSFWNE------------SYLTGSRDERKKSLLSKFGMDEG---VTFMFIGRFDRGQ 45
Query: 416 KGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471
KG D+L AI + ++ I++G G +E LE + +
Sbjct: 46 KGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFV 105
Query: 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 531
+ DF++IPS FEP GL+ L AM G +PI ++ GGL D +
Sbjct: 106 RELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNET----------- 154
Query: 532 CEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 573
V D ++ + +AL L++ +N + +S+
Sbjct: 155 GILVKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMSF 195
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 612 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.94 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.91 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.86 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 99.51 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 99.41 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 99.26 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.86 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.83 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.73 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.57 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.37 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.88 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.64 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.37 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.37 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.0 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 94.31 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 87.65 | |
| d1rcua_ | 170 | Hypothetical protein TM1055 {Thermotoga maritima [ | 84.51 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 84.18 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 80.86 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=9.3e-60 Score=515.36 Aligned_cols=464 Identities=34% Similarity=0.543 Sum_probs=384.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++|+.+|+|+.++||+++++.+|+++|+++||+|+||+|.|+...+.+.................+.++....|+++
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence 99999999999988899999999999999999999999999999887776554433222222223456777788899999
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
+++++|.++.+.+ .+|....+.+|.++..+|..+++++.++++..... .+||+ ||+|+|++++.+
T Consensus 81 ~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~pDI-vH~h~~~~~l~~ 145 (477)
T d1rzua_ 81 LILDAPAYYERSG-----GPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPG---------WRPDM-VHAHDWQAAMTP 145 (477)
T ss_dssp EEEECHHHHCSSS-----CSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSS---------CCCSE-EEEEHHHHTTHH
T ss_pred EEecChhhcccCC-----CcccCcccccccccHHHHHHHHHHHHhhhhhcccC---------CCCCE-EEecchhHHHHH
Confidence 9999999887644 36777778889999999999999988887765321 36895 999999999999
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
.+++.... .++|+|+|+|++.+...++...+..++.+...... ........+++++..+..+|.++++
T Consensus 146 ~~~~~~~~-----~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ad~~~~v 213 (477)
T d1rzua_ 146 VYMRYAET-----PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGM-------EGIEYYNDVSFLKGGLQTATALSTV 213 (477)
T ss_dssp HHHHHSSS-----CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSST-------TTTEETTEEEHHHHHHHHCSEEEES
T ss_pred HHHHHhhC-----CCCCEEEEEecccccccCCHHHHHHhhcchhhccc-------ccccccchhHHHHHHHHhhhhhhhc
Confidence 88876432 58999999999988888887777777665544221 0111223557788899999999999
Q ss_pred CHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 325 SPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
|+.+++++... .+|...+.+. +..++.+|+||+|.+.|+|...+.+..+++.... .....++..++...+++. ++
T Consensus 214 s~~~~~~~~~~-~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~ 290 (477)
T d1rzua_ 214 SPSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDD-DG 290 (477)
T ss_dssp CHHHHHHTTSH-HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCC-SS
T ss_pred cHHHHHHHHHH-hcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhH-HHhhhhHHHHHHhccccc-CC
Confidence 99999887641 2333333222 2348999999999999999988888877766654 445567778888899874 46
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
.++|+|+||+.++||++.|++|++++.+.+.+++++|.|+......+.++...+++++.+.+.++.++...++++||++|
T Consensus 291 ~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v 370 (477)
T d1rzua_ 291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAII 370 (477)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEE
T ss_pred ccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCcccc
Confidence 78999999999999999999999998888999999999998888888888888888999999999999989999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCc---------ceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF---------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~---------~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+||++|+||++++|||+||+|||+|++||++|+|.++. +|++| ++.|+++|+++|.++++.
T Consensus 371 ~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~----------~~~d~~~la~ai~~~l~~ 440 (477)
T d1rzua_ 371 IPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVRY 440 (477)
T ss_dssp ECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHHHHH
T ss_pred CCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEe----------CCCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999998864 89977 999999999999999885
Q ss_pred hC-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Q 007212 554 YG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 554 ~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
++ ++.+++|++++++++|||+.++++|+++|++++
T Consensus 441 ~~~~~~~~~~~~~a~~~~fsw~~~a~~~~~lY~~ll 476 (477)
T d1rzua_ 441 YHDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLI 476 (477)
T ss_dssp HTCHHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHT
T ss_pred hCCHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 43 688999999999999999999999999999986
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=5.8e-46 Score=398.01 Aligned_cols=425 Identities=24% Similarity=0.336 Sum_probs=313.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
||||+++.+|+|. ++||+++++..|+++|+++||+|+|+||.|+.... .....+.........+.......++++
T Consensus 1 MkIl~~~~~~pP~-~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (437)
T d2bisa1 1 MKVLLLGFEFLPV-KVGGLAEALTAISEALASLGHEVLVFTPSHGRFQG----EEIGKIRVFGEEVQVKVSYEERGNLRI 75 (437)
T ss_dssp CEEEEECSCCTTC-CSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCC----EEEEEEECSSSEEEEEEEEEEETTEEE
T ss_pred CEEEEECCccCCc-ccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccch----hhccceeecccccceeeeeeccCCeEE
Confidence 9999999999994 67999999999999999999999999998875443 222333333333445555666778999
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
+++..+.+... ..|.+ .+.....++..++++....+..+... ...||+ ||+|+|++++++
T Consensus 76 ~~~~~~~~~~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~pDi-Ih~~~~~~~~~~ 135 (437)
T d2bisa1 76 YRIGGGLLDSE-------DVYGP----GWDGLIRKAVTFGRASVLLLNDLLRE--------EPLPDV-VHFHDWHTVFAG 135 (437)
T ss_dssp EEEESSGGGCS-------CTTCS----HHHHHHHHHHHHHHHHHHHHHHHTTS--------SCCCSE-EEEETGGGHHHH
T ss_pred EecCccccccc-------ccccc----chhhHHHHHHHHHHHHHHHHHHHHhc--------CCCCCE-EEECChhhhhHh
Confidence 88876544321 22211 12223333445556655555554221 135895 999999998888
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
.+++.. .++|+++++|+..+.. ++...+...+++... .......++.....+|.++++
T Consensus 136 ~~~~~~-------~~~~~v~~~h~~~~~~-~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~d~v~~~ 193 (437)
T d2bisa1 136 ALIKKY-------FKIPAVFTIHRLNKSK-LPAFYFHEAGLSELA--------------PYPDIDPEHTGGYIADIVTTV 193 (437)
T ss_dssp HHHHHH-------HCCCEEEEESSCCCCC-EEHHHHHHTTCGGGC--------------CSSEECHHHHHHHHSSEEEES
T ss_pred hhhhcc-------ccCceeEEEeeccccc-cchhhhhhccchhhh--------------hHHHHHHHHHHHHhhhhhccc
Confidence 777766 3899999999876532 211111111111111 122345567788899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
++....+.... ++.. ..++.+|+||+|.+.|.|...+ ..+...+..+++++++. +.+
T Consensus 194 ~~~~~~~~~~~--~~~~------~~ki~vi~~g~d~~~~~~~~~~------------~~~~~~~~~~~~~~~~~---~~~ 250 (437)
T d2bisa1 194 SRGYLIDEWGF--FRNF------EGKITYVFNGIDCSFWNESYLT------------GSRDERKKSLLSKFGMD---EGV 250 (437)
T ss_dssp CHHHHHHTHHH--HGGG------TTTEEECCCCCCTTTSCGGGCC------------SCHHHHHHHHHHHTTCC---SCE
T ss_pred chhhhhhhhhh--hccc------cCceEEEecccccccccccccc------------hhhHHHHHhhhhhhhcc---CCc
Confidence 99988765531 2222 2389999999999988765321 23344566788888876 347
Q ss_pred EEEEEccCc-cccCHHHHHHHHHhccc----CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 405 VIGFIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 405 ~i~~iGrl~-~~Kg~d~li~A~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
+|+|+||+. ++||++.+++|+..+.. ++++|+|+|.|+...+..++.+....++.+.+.+..+.+.+..+++.||
T Consensus 251 ~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 330 (437)
T d2bisa1 251 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVD 330 (437)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEECSCCCHHHHHHHHTTCS
T ss_pred eEEEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccccccceeccccCcHHHHHHHHhhhc
Confidence 999999996 57999999999998743 5899999999998788888888777776555555557888889999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 559 (612)
++++||..|++|++++|||+||+|||+|+.||..|++++ .+|+++ ++.|+++|+++|.+++++. ++.+
T Consensus 331 i~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~----------~~~d~~~la~~i~~ll~~~-~~~~ 398 (437)
T d2bisa1 331 FVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILV----------KAGDPGELANAILKALELS-RSDL 398 (437)
T ss_dssp EEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEE----------CTTCHHHHHHHHHHHHTTT-TSCT
T ss_pred cccccccccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEE----------CCCCHHHHHHHHHHHHhCC-HHHH
Confidence 999999999999999999999999999999999999986 589977 9999999999999999742 3456
Q ss_pred HHHHHHH--HHhhcCcHHHHHHHHHHHHHHHHcC
Q 007212 560 AEMMKNG--MAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 560 ~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~~~ 591 (612)
++|++++ ..++|||++++++|+++|++++.+.
T Consensus 399 ~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~ 432 (437)
T d2bisa1 399 SKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRA 432 (437)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCCB
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhH
Confidence 6666665 3568999999999999999987543
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.7e-35 Score=307.10 Aligned_cols=229 Identities=14% Similarity=0.177 Sum_probs=182.2
Q ss_pred hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHh
Q 007212 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 395 (612)
..++.+++.++...+.+.+. ++.+.+ ++.+|+||+|++.+.+... +..++.+++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~--~~~~~~------~i~vi~~gv~~~~~~~~~~----------------~~~~~~~r~~~ 189 (370)
T d2iw1a1 134 GKSTKLMMLTDKQIADFQKH--YQTEPE------RFQILPPGIYPDRKYSEQI----------------PNSREIYRQKN 189 (370)
T ss_dssp TCCCEEEESCHHHHHHHHHH--HCCCGG------GEEECCCCCCGGGSGGGSC----------------TTHHHHHHHHT
T ss_pred ccCceEEEecHHHHHHHHHh--cCCCcc------eEEEEEeecccccccccCc----------------hhhhhhhhhcc
Confidence 35789999999998887752 444444 8999999999877654321 22367788999
Q ss_pred CCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHH
Q 007212 396 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLA 471 (612)
Q Consensus 396 gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~ 471 (612)
+++.+ .++|+|+||+.++||++.+++|++++.+ ++..++++|.++. .+.++++..++ .+++.+.+.. +++
T Consensus 190 ~~~~~--~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~--~~~~~~~~~~~~~~~~v~~~g~~--~~~ 263 (370)
T d2iw1a1 190 GIKEQ--QNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDK--PRKFEALAEKLGVRSNVHFFSGR--NDV 263 (370)
T ss_dssp TCCTT--CEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--CHHHHHHHHHHTCGGGEEEESCC--SCH
T ss_pred CCCcc--ceEEEEEeccccccchhhhcccccccccccccceeeecccccc--ccccccccccccccccccccccc--ccc
Confidence 99864 4899999999999999999999999976 4666666665541 22344444433 2457776643 346
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
..+++.||++|+||..|+||++++|||+||+|||+|+.||++|++.++.+|+++ +++.|+++|+++|.+++
T Consensus 264 ~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~---------~~~~d~~~la~~i~~ll 334 (370)
T d2iw1a1 264 SELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI---------AEPFSQEQLNEVLRKAL 334 (370)
T ss_dssp HHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE---------CSSCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccceeeecccCCeeEEEeCCCChHHHhcCCCceEEE---------cCCCCHHHHHHHHHHHH
Confidence 679999999999999999999999999999999999999999999999999864 47899999999999999
Q ss_pred HhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~ 585 (612)
++ ++.+.+|++++ ..+.|+|....+++.++|+
T Consensus 335 ~d--~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 335 TQ--SPLRMAWAENARHYADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp HC--HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHHHHhChhHHHHHHHHHHh
Confidence 98 77888888887 3577888888888888775
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.94 E-value=7.6e-26 Score=216.03 Aligned_cols=189 Identities=28% Similarity=0.448 Sum_probs=158.5
Q ss_pred CccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCc-cccCHHHHHHHHHhccc----C
Q 007212 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK----E 431 (612)
Q Consensus 357 gvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~-~~Kg~d~li~A~~~l~~----~ 431 (612)
|||++.|.|... ...+...+..+++++|++ +.++|+|+||+. ++||++.+++|++.+.+ +
T Consensus 1 gid~~~~~~~~~------------~~~~~~~~~~~~~~~~l~---~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~ 65 (196)
T d2bfwa1 1 GIDCSFWNESYL------------TGSRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ 65 (196)
T ss_dssp CCCTTTSSGGGS------------CSCHHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG
T ss_pred CcChhhcCCCCC------------CchhHHHHHHHHHHhCCC---CCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCC
Confidence 789998877532 133455678899999997 447899999996 69999999999999853 5
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 511 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg 511 (612)
+++|+|+|+|++.++..++.+...+++.+...+..+.+++..+|+.||++|+||..|++|++++|||+||+|||+++.|+
T Consensus 66 ~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~ 145 (196)
T d2bfwa1 66 EMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG 145 (196)
T ss_dssp GEEEEEECCBCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHH
T ss_pred CeEEEEEeecccchhhhhhhhhhccceeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCc
Confidence 89999999998888888888888877655555666788889999999999999999999999999999999999999999
Q ss_pred cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcC
Q 007212 512 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLS 572 (612)
Q Consensus 512 ~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fs 572 (612)
+.|++.+ .+|+++ ++.|+++++++|.++++.. ++.+.++++++. +.+||
T Consensus 146 ~~e~i~~-~~g~~~----------~~~~~~~l~~~i~~~l~~~-~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 146 LRDIITN-ETGILV----------KAGDPGELANAILKALELS-RSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp HHHHCCT-TTCEEE----------CTTCHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHTC
T ss_pred cceeecC-CceeeE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhCC
Confidence 9999876 589987 9999999999999999842 567777877774 34454
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=3.9e-23 Score=222.35 Aligned_cols=293 Identities=14% Similarity=0.087 Sum_probs=209.2
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +++.||||..++|.+++... .+.++.+++|...+.- ..+..+ ....
T Consensus 124 d-~iwvhDyhl~llp~~lR~~~------~~~~i~~flH~pfP~~----~~fr~l----------------------p~~~ 170 (456)
T d1uqta_ 124 D-IIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIPFPTP----EIFNAL----------------------PTYD 170 (456)
T ss_dssp C-EEEEESGGGTTHHHHHHHTT------CCSCEEEECCSCCCCH----HHHTTS----------------------TTHH
T ss_pred C-eEEEeccchhhhHHHHHHhC------CCCcEEEEeCCCCCCh----HHhccC----------------------cchH
Confidence 6 69999999999999999875 6889999999543210 111100 1123
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCc--CCCccc--hhh----hhccCeEEeeCCccCCCcCCCcccccccccCcchhh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGE--DKGVEL--DNI----IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 381 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~G~~~--~~~----~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~ 381 (612)
.+..++..+|.|.+.+..+++.+.+.. ..|.+. ... -+..++.++|+|+|++.|.+....
T Consensus 171 ~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~------------ 238 (456)
T d1uqta_ 171 TLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAG------------ 238 (456)
T ss_dssp HHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHS------------
T ss_pred HHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhccc------------
Confidence 455678899999999999987775311 111110 000 012378899999998877542210
Q ss_pred hccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEEEEEecCC----h---hHHHH
Q 007212 382 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PMEKQ 448 (612)
Q Consensus 382 ~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~lvivG~g~----~---~~~~~ 448 (612)
. ......+++.+++ ++++|+++||+++.||++.+++|++++.+ + ++.++++|.+. . ++..+
T Consensus 239 ~-~~~~~~~l~~~~~-----~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~e 312 (456)
T d1uqta_ 239 P-LPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQ 312 (456)
T ss_dssp C-CCHHHHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHH
T ss_pred H-HHHHHHHHHHhcC-----CCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHH
Confidence 0 1112334555543 55899999999999999999999999865 2 57888888754 1 23344
Q ss_pred HHHHHHHC---------CCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc-----eEEcCCCCccc
Q 007212 449 LEQLEILY---------PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV-----PIVASTGGLVD 514 (612)
Q Consensus 449 l~~l~~~~---------~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~P-----vI~s~~gg~~e 514 (612)
+.++..+. ...+.+....+.+++..+|+.||++++||..||||++.+|||+||+| +|+|+.+|..+
T Consensus 313 v~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~ 392 (456)
T d1uqta_ 313 LENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN 392 (456)
T ss_dssp HHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGG
T ss_pred HHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHH
Confidence 44443321 23355556668888889999999999999999999999999999999 89999999999
Q ss_pred ceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHH
Q 007212 515 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 515 ~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l 587 (612)
.+.+ |+++ +|.|++++|++|.++|+++ +++++++.+++ ....||+..-++.+++-++++
T Consensus 393 ~l~~---g~lV----------nP~d~~~~A~ai~~aL~~~-~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 393 ELTS---ALIV----------NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 453 (456)
T ss_dssp TCTT---SEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HhCC---eEEE----------CcCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhh
Confidence 9854 7765 9999999999999999973 44555555554 346789998888888887765
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=2.4e-21 Score=179.50 Aligned_cols=138 Identities=15% Similarity=0.218 Sum_probs=121.5
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC--hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
..++|+||+.++||++.+++|++++ ++.+++|+|.+. +..+...+++.....+++.+.+..+.+++..+++.||++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l--~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~ 90 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGL 90 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh--cCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccc
Confidence 3578999999999999999999998 677889999765 344555555555556689999988999999999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
|+||..|+||++++|||++|+|||+|+.++..|++.++.+|+++ +.|+++++++|.++++++
T Consensus 91 i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~-----------~~d~~~~~~~i~~l~~~~ 152 (166)
T d2f9fa1 91 LCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-----------NADVNEIIDAMKKVSKNP 152 (166)
T ss_dssp EECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-----------CSCHHHHHHHHHHHHHCT
T ss_pred ccccccccccccccccccccccceeecCCcceeeecCCcccccC-----------CCCHHHHHHHHHHHHhCH
Confidence 99999999999999999999999999999999999999999964 458999999999999984
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=99.51 E-value=3.5e-12 Score=141.40 Aligned_cols=293 Identities=16% Similarity=0.147 Sum_probs=191.3
Q ss_pred CcEEEEeCCCcccchHHHHHhh-hcCCCC-------cCCceEEEEEecCCcccc--cCcccccccCCCccccccc-----
Q 007212 229 KNVVFVANDWHTSLIPCYLKTM-YKPKGM-------YKSAKVVFCIHNIAYQGR--FAFEDFGLLNLPAQFKSSF----- 293 (612)
Q Consensus 229 pDvVi~~h~~~~~~~~~~l~~~-~~~~~~-------~~~~pvv~~iH~~~~~~~--~~~~~~~~~~l~~~~~~~~----- 293 (612)
++ ++|.||-|++++..-+.+. ....|+ .....++||.|++.+.|. |+.+.+..+ ++..+ ..+
T Consensus 300 ~~-vihlNEgHpafai~El~R~l~d~~gl~~~~A~e~vr~~~~fTtHTpvpag~e~fp~~li~~~-l~~~~-~~i~~i~~ 376 (796)
T d1l5wa_ 300 YE-VIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGL-LPRHM-QIINEINT 376 (796)
T ss_dssp HE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHH-CHHHH-HHHHHHHH
T ss_pred hh-hhhcccchHHHHHHHHHHHHHHhcCCCHHHHHHHhhceEEEeccCCchhhccccCHHHHHHH-hHHHH-HHHhHhhH
Confidence 56 5999999998877755433 222222 124678999999887663 443333211 00000 000
Q ss_pred cccc------CC-------CCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccC
Q 007212 294 DFID------GY-------NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV 360 (612)
Q Consensus 294 ~~~~------~~-------~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~ 360 (612)
.|.+ +- ........+++-..++..|..+..||+-+.+.+.+...... .. +-+.+|.-|.|||.+
T Consensus 377 ~fl~~~~~~~~~d~~~~~~~~~~~~~~~~Ma~LAl~~S~~vNGVSklH~ev~~~~~~~~~--~~-~~p~~i~~ITNGVh~ 453 (796)
T d1l5wa_ 377 RFKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEY--HQ-LWPNKFHNVTNGITP 453 (796)
T ss_dssp HHHHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHH--HH-HCGGGEEECCCCBCH
T ss_pred HHHHHHHHHCCCcHHHHhhhchhcccccchHHHHHHhhhhhHHHHHHHHHHHHHHhhhhc--cc-cCCcccccccccccH
Confidence 0000 00 00011235677788899999999999999887665221100 00 112389999999999
Q ss_pred CCcCCCccc--------cccccc--Cc----------------chhhhccHHHH----HHHHHHhCCCCCCCCcEEEEEc
Q 007212 361 QEWNPLTDK--------YIGVKY--DA----------------STVMDAKPLLK----EALQAEVGLPVDRNIPVIGFIG 410 (612)
Q Consensus 361 ~~~~p~~~~--------~~~~~~--~~----------------~~~~~~~~~~~----~~l~~~~gl~~~~~~~~i~~iG 410 (612)
..|.....+ ++...+ ++ ..+.+.+..+| +.+++..|...+++...++|+-
T Consensus 454 ~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaR 533 (796)
T d1l5wa_ 454 RRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIK 533 (796)
T ss_dssp HHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEES
T ss_pred HHHHhhhCHHHHHHHHhhcccccccCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhh
Confidence 888532111 111110 01 11223333333 3346677888888889999999
Q ss_pred cCccccCHHHHHHHHHh----ccc------CCeEEEEEecCC------hhHHHHHHHHHHH---CC-----CceEEEecc
Q 007212 411 RLEEQKGSDILAAAIPH----FIK------ENVQIIVLGTGK------KPMEKQLEQLEIL---YP-----EKARGVAKF 466 (612)
Q Consensus 411 rl~~~Kg~d~li~A~~~----l~~------~~~~lvivG~g~------~~~~~~l~~l~~~---~~-----~~v~~~~~~ 466 (612)
|+.++|..++++.-+.. |.+ .+++|++.|... +++.+.+.+++.. .| .+|.|+..|
T Consensus 534 Rfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenY 613 (796)
T d1l5wa_ 534 RLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDY 613 (796)
T ss_dssp CCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSC
T ss_pred hhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCC
Confidence 99999999885544433 322 268999999854 3455555555542 22 168999999
Q ss_pred ChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CcceEEecc
Q 007212 467 NIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGS 527 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~ 527 (612)
+...+..++++||+.+..++ +|++|.+-+-||..|.+.+++-.|...|+.++ +.|||.||.
T Consensus 614 dv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG~ 678 (796)
T d1l5wa_ 614 CVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGH 678 (796)
T ss_dssp CHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC
T ss_pred chHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEecC
Confidence 99999999999999999998 59999999999999999999999999998875 789999984
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.41 E-value=2.8e-10 Score=126.03 Aligned_cols=289 Identities=19% Similarity=0.185 Sum_probs=191.9
Q ss_pred EEEeCCCcccchHHHHHhhh-cCCCC-------cCCceEEEEEecCCcccc--cCcccccccCCCc----------cccc
Q 007212 232 VFVANDWHTSLIPCYLKTMY-KPKGM-------YKSAKVVFCIHNIAYQGR--FAFEDFGLLNLPA----------QFKS 291 (612)
Q Consensus 232 Vi~~h~~~~~~~~~~l~~~~-~~~~~-------~~~~pvv~~iH~~~~~~~--~~~~~~~~~~l~~----------~~~~ 291 (612)
++|.||-|++++..-+-+.+ ...|+ .....++||.|++.+.|. |+.+.+..+ +|. .+..
T Consensus 323 vihlNegHpa~ai~ElmR~l~d~~gl~~d~A~e~v~~~~~fTtHTpvpag~E~f~~~l~~~~-lpr~~~ii~ei~~~fl~ 401 (824)
T d2gj4a1 323 AIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETL-LPRHLQIIYEINQRFLN 401 (824)
T ss_dssp EEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHH-CHHHHHHHHHHHHHHHH
T ss_pred eeeccCCccHhHHHHHHHHHHHhcCCCHHHHHHHhhceEEEEeccCchHhcCccCHHHHHHH-hHHHhhhhhhhHHHHHH
Confidence 59999999988777544432 22232 113469999999887663 444433221 010 0000
Q ss_pred --------------ccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC
Q 007212 292 --------------SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 357 (612)
Q Consensus 292 --------------~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng 357 (612)
.+..++. -....+++-..++..|..+..||.-+.+.+.+.... +. .-+-+.++.-|.||
T Consensus 402 ~~~~~~~~d~~~~~~l~ii~e----~~~~~~~Ma~Lal~~S~~vNGVSklH~ev~~~~~~~--~~-~~~~p~ki~~iTNG 474 (824)
T d2gj4a1 402 RVAAAFPGDVDRLRRMSLVEE----GAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFK--DF-YELEPHKFQNKTNG 474 (824)
T ss_dssp HHHHHSTTCHHHHHHHCSEEC----SSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTH--HH-HHHCGGGEEECCCC
T ss_pred HHHHHCCCcHHHHhhcccccc----cCCceeeHHHHHHHhchhHHHHHHHHHHHHHHhhcc--cc-ccCCCcceecccCc
Confidence 0000000 012345677888999999999999998887753211 00 01122489999999
Q ss_pred ccCCCcCCCccccccc---cc-------Ccc----------------hhhhccHHHHHH----HHHHhCCCCCCCCcEEE
Q 007212 358 MDVQEWNPLTDKYIGV---KY-------DAS----------------TVMDAKPLLKEA----LQAEVGLPVDRNIPVIG 407 (612)
Q Consensus 358 vd~~~~~p~~~~~~~~---~~-------~~~----------------~~~~~~~~~~~~----l~~~~gl~~~~~~~~i~ 407 (612)
|.+..|-....+.+.. ++ |++ .+.+.+..+|.. ++++.|...+++...++
T Consensus 475 V~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~ 554 (824)
T d2gj4a1 475 ITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDV 554 (824)
T ss_dssp BCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEE
T ss_pred ccCccchhccCHHHHHHHHhhhccccccCHHHHHHHHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhh
Confidence 9999995432211110 00 111 122344444444 56677888888899999
Q ss_pred EEccCccccCHHHHH----HHHHhccc------CCeEEEEEecCC------hhHHHHHHHHHHH---CC-----CceEEE
Q 007212 408 FIGRLEEQKGSDILA----AAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQLEIL---YP-----EKARGV 463 (612)
Q Consensus 408 ~iGrl~~~Kg~d~li----~A~~~l~~------~~~~lvivG~g~------~~~~~~l~~l~~~---~~-----~~v~~~ 463 (612)
++-|+.++|...+.+ ..+..+++ .+++|++.|... +.+.+.+.+++.. .| .+|.|+
T Consensus 555 ~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFl 634 (824)
T d2gj4a1 555 QVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFL 634 (824)
T ss_dssp EESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEE
T ss_pred heeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeEEEc
Confidence 999999999998833 22344433 378999999854 3455555555542 11 268999
Q ss_pred eccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CcceEEeccc
Q 007212 464 AKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSF 528 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~~ 528 (612)
..|+...+..++.+||+.+..|+ .|++|.+-+-+|..|.+.+++-.|...|+.++ +.|||.||..
T Consensus 635 enY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~~ 703 (824)
T d2gj4a1 635 ENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR 703 (824)
T ss_dssp TTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC
T ss_pred CCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeCCC
Confidence 99999999999999999999998 49999999999999999999999999998875 6799999843
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.86 E-value=5.5e-08 Score=99.14 Aligned_cols=80 Identities=23% Similarity=0.179 Sum_probs=59.8
Q ss_pred CCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccceecCcceEEeccc
Q 007212 457 PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSF 528 (612)
Q Consensus 457 ~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~~~~~~ 528 (612)
++++.....++.. .++..+|++|..+- ..+++|||++|+|+|+....+ ..+.+.+.+.|..+
T Consensus 269 ~~~v~i~~~~p~~---~ll~~a~~~v~hgG----~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l--- 338 (391)
T d1pn3a_ 269 GADCFVVGEVNLQ---ELFGRVAAAIHHDS----AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAV--- 338 (391)
T ss_dssp CTTCCEESSCCHH---HHHTTSSCEEEESC----HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEE---
T ss_pred CCCEEEecccCHH---HHHhhccEEEecCc----hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEc---
Confidence 4567666666543 47899999997754 468999999999999987543 34556666678865
Q ss_pred ccccccCCCC--CHHHHHHHHHHHHHh
Q 007212 529 SVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 529 ~~~~~~v~~~--d~~~la~~i~~ll~~ 553 (612)
+.. ++++|+++|++++++
T Consensus 339 -------~~~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 339 -------DGPVPTIDSLSAALDTALAP 358 (391)
T ss_dssp -------CCSSCCHHHHHHHHHHHTST
T ss_pred -------CcCCCCHHHHHHHHHHHhCH
Confidence 443 589999999999964
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.83 E-value=2.5e-08 Score=102.14 Aligned_cols=126 Identities=13% Similarity=0.082 Sum_probs=79.6
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
.+++..|........+..-.++..+...+..+++....... .....++++.....++.. .++..+|++|.
T Consensus 239 ~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~p~~---~ll~~~~~~I~ 308 (401)
T d1rrva_ 239 PVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTEL-------VLPDDRDDCFAIDEVNFQ---ALFRRVAAVIH 308 (401)
T ss_dssp CEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTC-------CCSCCCTTEEEESSCCHH---HHGGGSSEEEE
T ss_pred eEEEECCccccCCHHHHHHHHHHHHhhcCCeEEEecccccc-------ccccCCCCEEEEeccCcH---HHhhhccEEEe
Confidence 56666776654443333333333343333333333332210 011245667777666543 47899999994
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007212 484 PSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~~ 553 (612)
.+-..++.||+++|+|+|+....+ ..+.+++.+.|..+ +.. ++++|+++|++++++
T Consensus 309 ----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l----------~~~~~~~~~L~~ai~~vl~~ 370 (401)
T d1rrva_ 309 ----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH----------DGPTPTFESLSAALTTVLAP 370 (401)
T ss_dssp ----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC----------SSSCCCHHHHHHHHHHHTSH
T ss_pred ----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHhCH
Confidence 556789999999999999977655 45556666678865 443 589999999999953
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.73 E-value=2.8e-07 Score=92.62 Aligned_cols=158 Identities=12% Similarity=0.006 Sum_probs=84.4
Q ss_pred cEEEEEc-cCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 404 PVIGFIG-RLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~i~~iG-rl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
..++.+| ......-.+.+.+.+..+.. ....++.+............. ...+.++.. ..|..+ .+.+++.||++|
T Consensus 178 ~~i~~~~gs~g~~~~~~~~~~~~~~l~~-~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~v-~~f~~~-~~~lm~~adl~I 253 (351)
T d1f0ka_ 178 VRVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGSQQSVEQAYA-EAGQPQHKV-TEFIDD-MAAAYAWADVVV 253 (351)
T ss_dssp EEEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTCHHHHHHHHH-HTTCTTSEE-ESCCSC-HHHHHHHCSEEE
T ss_pred cccccccccchhhhhHHHHHHhhhhhcc-cceeeeeccccchhhhhhhhc-cccccccee-eeehhh-HHHHHHhCchhh
Confidence 4454444 44333334555555665532 333444444332222222222 233333433 334433 447899999998
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCC---C----cccceecCcceEEecccccccccCCC--CCHHHHHHHHHHHHHh
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTG---G----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRALAT 553 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~g---g----~~e~v~~g~~G~~~~~~~~~~~~v~~--~d~~~la~~i~~ll~~ 553 (612)
.-+ =+.++.||+++|+|+|+-... + .++.+.+-+.|+.+ +. -+.+.+.++|..+.
T Consensus 254 t~~----G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~----------~~~~~~~e~l~~~l~~l~-- 317 (351)
T d1f0ka_ 254 CRS----GALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKII----------EQPQLSVDAVANTLAGWS-- 317 (351)
T ss_dssp ECC----CHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHTCC--
T ss_pred ccc----cchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEe----------chhhCCHHHHHHHHHhhC--
Confidence 432 248899999999999986532 1 23345555677754 33 24677777766542
Q ss_pred hCHHHHHHHHHHHHHh--hcCcHHHHHHHHHH
Q 007212 554 YGTQALAEMMKNGMAQ--DLSWKGPAKKWEET 583 (612)
Q Consensus 554 ~~~~~~~~~~~~~~~~--~fsw~~~a~~~~~~ 583 (612)
.+.+.+|++++... .-.++.+++..+++
T Consensus 318 --~~~~~~~~~~~~~~~~~~~a~~i~~~i~~l 347 (351)
T d1f0ka_ 318 --RETLLTMAERARAASIPDATERVANEVSRV 347 (351)
T ss_dssp --HHHHHHHHHHHHHTCCTTHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHccCCccHHHHHHHHHHHH
Confidence 45677777776432 12344444444443
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.57 E-value=1.3e-06 Score=88.54 Aligned_cols=122 Identities=16% Similarity=0.110 Sum_probs=77.7
Q ss_pred cEEEEEccCc-cccCHHHHHHHHHhcccCCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~-~~Kg~d~li~A~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.++.+.|... ..+..+.+++++..+ +..++++ |..... ....++++......+.. .++.++|++
T Consensus 240 ~i~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~~--------~~~~~~nv~~~~~~p~~---~~l~~~~~~ 305 (401)
T d1iira_ 240 PVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLV--------LPDDGADCFAIGEVNHQ---VLFGRVAAV 305 (401)
T ss_dssp CEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCC--------CSSCGGGEEECSSCCHH---HHGGGSSEE
T ss_pred eEEEccCccccchHHHHHHHHHHHHc---CCeEEEeccCCccc--------cccCCCCEEEEeccCHH---HHHhhcCEE
Confidence 4444445443 455666677776665 3333333 332211 11234567766666543 478999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~~ 553 (612)
| ..+-..++.||+++|+|+|+....+ ..+.+.+.+.|..+ +.. ++++++++|.+++++
T Consensus 306 V----~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l----------~~~~~~~~~l~~ai~~~l~~ 369 (401)
T d1iira_ 306 I----HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH----------DGPIPTFDSLSAALATALTP 369 (401)
T ss_dssp E----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------SSSSCCHHHHHHHHHHHTSH
T ss_pred E----ecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHhCH
Confidence 9 4567889999999999999965443 44455555678864 433 699999999999964
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.37 E-value=8.1e-05 Score=75.71 Aligned_cols=271 Identities=13% Similarity=0.062 Sum_probs=168.8
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+|++.=|-...+.+...... .++|++ .+|.=...|... .+.+
T Consensus 88 kPD~vlv~GDr~e~la~a~aa~~-------~~ipi~-HiegG~rsg~~~------~~~~--------------------- 132 (373)
T d1v4va_ 88 GADYVLVHGDTLTTFAVAWAAFL-------EGIPVG-HVEAGLRSGNLK------EPFP--------------------- 132 (373)
T ss_dssp TCSEEEEESSCHHHHHHHHHHHH-------TTCCEE-EETCCCCCSCTT------SSTT---------------------
T ss_pred CcccccccccCccchhHHHHHHH-------hhhhhe-eecccccccccc------cCcc---------------------
Confidence 58986666576666666655544 488887 444211111000 0111
Q ss_pred hHHHHHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC-ccCCCcCCCcccccccccCcchhhhccH
Q 007212 308 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 308 ~~~~k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
-...|..+ +.||..++.++..++.+.+ .|.+.. +|.++=+. +|. + .
T Consensus 133 de~~R~~iskls~~hf~~t~~~~~~L~~---~Ge~~~------~I~~vG~p~~D~--i---------------------~ 180 (373)
T d1v4va_ 133 EEANRRLTDVLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDA--V---------------------L 180 (373)
T ss_dssp HHHHHHHHHHHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHH--H---------------------H
T ss_pred hhhhhhhhccccceeeecchhhhhhhhh---hccccc------ceeecccchhhH--H---------------------H
Confidence 12334444 4699999999999999997 787765 66555432 221 0 0
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEE
Q 007212 386 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 463 (612)
Q Consensus 386 ~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~ 463 (612)
......+.....+ .+.+.++.+-|-+..+....+++++..+.+ .++.+++...........+.+..... .++..+
T Consensus 181 ~~~~~~~~~~~~~--~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~-~n~~~~ 257 (373)
T d1v4va_ 181 LAAKLGRLPEGLP--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGV-RNFVLL 257 (373)
T ss_dssp HHHHHCCCCTTCC--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTC-TTEEEE
T ss_pred hhhhhcccccccc--cccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhccc-ccceee
Confidence 0000000111222 234677778887777778888888887765 57777776655544444444444433 358888
Q ss_pred eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCcceEEecccccccccCCCCCHHH
Q 007212 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 542 (612)
..+.....-.++..|++++-- .|..+.||..+|+|+|.- +.|.-.+.++.|.+ .+ ...|.++
T Consensus 258 ~~l~~~~~l~ll~~s~~vign-----Sssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vl-----------v~~d~~~ 320 (373)
T d1v4va_ 258 DPLEYGSMAALMRASLLLVTD-----SGGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KL-----------AGTDPEG 320 (373)
T ss_dssp CCCCHHHHHHHHHTEEEEEES-----CHHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EE-----------CCSCHHH
T ss_pred ccchHHHHHHHhhhceeEecc-----cchhhhcchhhcCcEEEeCCCccCHHHHhcCee-EE-----------cCCCHHH
Confidence 888888777889999999844 467889999999999988 44666677666544 32 4569999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 543 VSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 543 la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
+.+++..++.+ +..+..+... ..-|.=-+.+++..+.+.+-+.
T Consensus 321 I~~~i~~~l~~--~~~~~~~~~~--~npYGdG~as~rI~~~L~~~~~ 363 (373)
T d1v4va_ 321 VYRVVKGLLEN--PEELSRMRKA--KNPYGDGKAGLMVARGVAWRLG 363 (373)
T ss_dssp HHHHHHHHHTC--HHHHHHHHHS--CCSSCCSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcC--HHHHhhcccC--CCCCCCCHHHHHHHHHHHHHhC
Confidence 99999999987 5454444331 2335444566777777766654
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.88 E-value=0.0016 Score=65.88 Aligned_cols=279 Identities=17% Similarity=0.082 Sum_probs=158.4
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+|++.=|-...+.+...... .++|++ ++|.=...+... .+.|+
T Consensus 86 kPD~v~v~GDr~e~la~a~aa~~-------~~ipi~-HiegG~~s~~~~------~~~pd-------------------- 131 (376)
T d1f6da_ 86 KPDVVLVHGDTTTTLATSLAAFY-------QRIPVG-HVEAGLRTGDLY------SPWPE-------------------- 131 (376)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHT-------TTCCEE-EESCCCCCSCTT------SSTTH--------------------
T ss_pred cCcceeeeccccchhhHHHHHHh-------hCceEE-EEeccccccccc------ccCch--------------------
Confidence 48986666576666666665554 488887 555311111000 01111
Q ss_pred hHHHHHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeC-CccCCCcC-CCcccccccccCcchhhhcc
Q 007212 308 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWN-PLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 308 ~~~~k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~n-gvd~~~~~-p~~~~~~~~~~~~~~~~~~~ 384 (612)
+..|.++ +.||..+|.++..++.+.+ .|.+.. +|.++-| ++|.-... +.. ....
T Consensus 132 -e~~R~~iskls~~hf~~~~~~~~~L~~---~G~~~~------~I~~vG~~~~D~l~~~~~~~-------------~~~~ 188 (376)
T d1f6da_ 132 -EANRTLTGHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQV-------------MSSD 188 (376)
T ss_dssp -HHHHHHHHHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHT-------------TTCH
T ss_pred -hhhhhhhccceeEEEeccHHHHhHHHh---cCCCcc------ccceecCchHHHHHHHHhhh-------------hccc
Confidence 2234444 5699999999999999997 787766 7777665 23321000 000 0000
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEccCc-cccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceE
Q 007212 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKAR 461 (612)
Q Consensus 385 ~~~~~~l~~~~gl~~~~~~~~i~~iGrl~-~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~ 461 (612)
...+..+.....+..+ +..+++..=|.+ ..+..+.++.++..+.+ .++.+++--...........+.... ..++.
T Consensus 189 ~~~~~~~~~~~~~~~~-~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~-~~ni~ 266 (376)
T d1f6da_ 189 KLRSELAANYPFIDPD-KKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGH-VKNVI 266 (376)
T ss_dssp HHHHHHHTTCTTCCTT-SEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTT-CTTEE
T ss_pred hhhhhhhccccccCCC-CceEEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhhcc-cccce
Confidence 1111112222222222 234444444443 34566777788777654 4666666554443344444444333 34688
Q ss_pred EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCcceEEecccccccccCCCCCH
Q 007212 462 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 540 (612)
Q Consensus 462 ~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~ 540 (612)
.+..........++..|++++-- .|..+.||-.+|+|+|.-.. ..-++.+..+ +-.+ .+.|.
T Consensus 267 ~~~~l~~~~fl~ll~~a~~vign-----Sssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~-----------v~~~~ 329 (376)
T d1f6da_ 267 LIDPQEYLPFVWLMNHAWLILTD-----SGGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRL-----------VGTDK 329 (376)
T ss_dssp EECCCCHHHHHHHHHHCSEEEES-----SSGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEE-----------CCSSH
T ss_pred eeccccHHHHHHHHhhceEEEec-----CcchHhhHHHhCCCEEEcCCCccCccceecC-eeEE-----------CCCCH
Confidence 88888777777899999999944 45678899999999986533 2234555444 3343 34689
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHH
Q 007212 541 AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 541 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~ 586 (612)
+++.+++.+++++ +.....+.. ....|-=-+.+++..+++++
T Consensus 330 ~~I~~ai~~~l~~--~~~~~~~~~--~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 330 QRIVEEVTRLLKD--ENEYQAMSR--AHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp HHHHHHHHHHHHC--HHHHHHHHH--SCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--hHhhhhhcc--CCCCCCCChHHHHHHHHHHh
Confidence 9999999999987 333222211 12224334567777776654
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.64 E-value=0.004 Score=63.31 Aligned_cols=134 Identities=12% Similarity=-0.076 Sum_probs=76.9
Q ss_pred cEEEEEccCcc--ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~~--~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.+.+..|.+.. ..-...++++++.+ +.++++...+.... ..-.......+.++.....++...+ -....++++
T Consensus 267 ~v~~s~gs~~~~~~~~~~~~~~~~~~~---~~~vl~~~~~~~~~-~l~~~~~~~~~~nv~~~~~~pq~~l-L~hp~~~~f 341 (450)
T d2c1xa1 267 VVYISFGTVTTPPPAEVVALSEALEAS---RVPFIWSLRDKARV-HLPEGFLEKTRGYGMVVPWAPQAEV-LAHEAVGAF 341 (450)
T ss_dssp EEEEECCSSCCCCHHHHHHHHHHHHHH---TCCEEEECCGGGGG-GSCTTHHHHHTTTEEEESCCCHHHH-HTSTTEEEE
T ss_pred eeeecccccccCCHHHHHHHHHHHHhc---CCeEEEEECCCccc-cCChhhhhhccccccccccCChHhh-hccCceeEE
Confidence 34555555532 22244555555554 55666654432110 0001111223445766666666542 123677888
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCC----ccccee-cCcceEEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
|. -|=..++.||+.+|+|+|+-...+ ...-+. ..+.|.... .+.-+.+++.++|+++|+++
T Consensus 342 It----HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~--------~~~~t~~~l~~ai~~vL~d~ 407 (450)
T d2c1xa1 342 VT----HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE--------GGVFTKSGLMSCFDQILSQE 407 (450)
T ss_dssp EE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG--------GGSCCHHHHHHHHHHHHHSH
T ss_pred Ec----cCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEec--------CCCcCHHHHHHHHHHHhcCc
Confidence 83 344568999999999999987543 233343 346787640 12237899999999999983
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.37 E-value=0.005 Score=62.48 Aligned_cols=141 Identities=10% Similarity=-0.025 Sum_probs=74.9
Q ss_pred EEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
+++..+........+.+...+..+.....++++.-.+. ......+.+... .+.++........+.. ..+..+|++|.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~n~~v~~~~pq~~~-l~~p~~~~fIt 354 (461)
T d2acva1 277 VFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWME-LEGKGMICGWAPQVEV-LAHKAIGGFVS 354 (461)
T ss_dssp EEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHH-HHCSEEEESSCCHHHH-HHSTTEEEEEE
T ss_pred eeeeccccccCCCHHHHHHHHHHHHhcCccEEEEeecccccCCccchhhhc-cCCCeEEEecCCHHHH-HhcccCCEEEe
Confidence 33344444444454554444444433355655554332 111111111111 2233554555444443 36789999993
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCC----Ccccc-eecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 484 PSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDT-VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~-v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
-+=..++.||+.+|+|+|+.... ....- ++..+.|..+..... +--..-+.++++++|.++|++
T Consensus 355 ----HGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~--~~~~~~t~~~l~~a~~~vl~~ 423 (461)
T d2acva1 355 ----HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR--KGSDVVAAEEIEKGLKDLMDK 423 (461)
T ss_dssp ----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC--TTCCCCCHHHHHHHHHHHTCT
T ss_pred ----cCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeecccc--ccCCccCHHHHHHHHHHHhhC
Confidence 34456899999999999997643 23333 355567775410000 000014789999999999965
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.37 E-value=0.023 Score=56.87 Aligned_cols=272 Identities=15% Similarity=0.106 Sum_probs=143.4
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+|++.=|-...+.+.+.... .++|++ .+|. |....+. ..+.|+
T Consensus 88 kpD~v~v~GDr~e~la~a~aa~~-------~~Ipi~-Hieg----G~~s~~~--~~~~~d-------------------- 133 (377)
T d1o6ca_ 88 KPDIVLVHGDTTTTFAGSLAAFY-------HQIAVG-HVEA----GLRTGNK--YSPFPE-------------------- 133 (377)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHH-------TTCEEE-EESC----CCCCSCT--TTTTTH--------------------
T ss_pred ccceeEeeecccccchhhhhhhh-------ccceEE-EEec----ccccccc--cccCch--------------------
Confidence 58986666576666666666654 488886 4442 2111000 011222
Q ss_pred hHHHHHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC-ccCCCcCCCcccccccccCcchhhhccH
Q 007212 308 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 308 ~~~~k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
+..|..+ +.||..++.++..++.+.+ .|.+.+ +|.++-|. +|.-........ .
T Consensus 134 -e~~R~~iskls~~hf~~t~~~~~~L~~---~G~~~~------~I~~vG~~~~D~i~~~~~~~~------~--------- 188 (377)
T d1o6ca_ 134 -ELNRQMTGAIADLHFAPTGQAKDNLLK---ENKKAD------SIFVTGNTAIDALNTTVRDGY------S--------- 188 (377)
T ss_dssp -HHHHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC------C---------
T ss_pred -hhhccccccceeEEeecchhhhhhhhh---hccccc------eEeeccchhHHHHHHHHHHHH------h---------
Confidence 2334444 5699999999999999997 787765 67766653 332100000000 0
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEccCccc-cCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 386 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 386 ~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~-Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
....... ..+..+++..-|.+.. +.....+.++..+.. .++.+++...........+.+... ...++..
T Consensus 189 ------~~~~~~~-~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~ni~~ 260 (377)
T d1o6ca_ 189 ------HPVLDQV-GEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFG-DSDRVHL 260 (377)
T ss_dssp ------CSTTTTT-TTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC---CCSSEEE
T ss_pred ------hhhhhhc-cCCceEEEEeccccccccchHHHHHHHHhhcccccccccccccccccccchhhhhccc-cccceEe
Confidence 0000011 1233556666665432 222333333333322 466665554433333333333222 3346888
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCcceEEecccccccccCCCCCHH
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~ 541 (612)
+..+.......++..|++++-= .|..+.||-.+|+|+|.-.. ..-.+.++.|.+ .+ ...|.+
T Consensus 261 ~~~l~~~~fl~llk~s~~vIgn-----Sss~i~Ea~~lg~P~Inir~~tERqe~~~~g~n-il-----------v~~~~~ 323 (377)
T d1o6ca_ 261 IEPLEVIDFHNFAAKSHFILTD-----SGGVQEEAPSLGKPVLVLRDTTERPEGVEAGTL-KL-----------AGTDEE 323 (377)
T ss_dssp CCCCCHHHHHHHHHHCSEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTTTTSS-EE-----------ECSCHH
T ss_pred ccccchHHHHHHHhhhheeecc-----cchhHHhhhhhhceEEEeCCCCcCcchhhcCee-EE-----------CCCCHH
Confidence 8888888877899999999833 35568899999999997754 334555555433 33 345889
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 542 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 542 ~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
++.+++..++.+ ......+.. ....|.=-..+++..+++.+-
T Consensus 324 ~I~~~i~~~l~~--~~~~~~~~~--~~npYGdG~as~rI~~~L~~~ 365 (377)
T d1o6ca_ 324 NIYQLAKQLLTD--PDEYKKMSQ--ASNPYGDGEASRRIVEELLFH 365 (377)
T ss_dssp HHHHHHHHHHHC--HHHHHHHHH--CCCTTCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC--hHHHhhhcc--CCCCCCCChHHHHHHHHHHHh
Confidence 999999999987 444443322 122344345566666666543
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.00 E-value=0.045 Score=53.34 Aligned_cols=112 Identities=17% Similarity=0.171 Sum_probs=70.8
Q ss_pred HHHHHHHhCCCCCCCCcEE-EEEc-cCccccC--HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHC----CCc
Q 007212 388 KEALQAEVGLPVDRNIPVI-GFIG-RLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY----PEK 459 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i-~~iG-rl~~~Kg--~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~----~~~ 459 (612)
+....+.+++..+. +.| +..| +..+.|. .+..++.+..+.+.+.+++++|.+.+ .+..+.+.... ...
T Consensus 167 ~~~~~~~~~~~~~~--~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~e--~~~~~~~~~~~~~~~~~~ 242 (348)
T d1pswa_ 167 KSYTCNQFSLSSER--PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKD--HEAGNEILAALNTEQQAW 242 (348)
T ss_dssp HHHHHHHTTCCSSS--CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGG--HHHHHHHHTTSCHHHHTT
T ss_pred HHHHHHHhccccCC--CeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccch--HHHHHHHHHhhhcccccc
Confidence 45566677776433 444 4443 3344564 56688888888777889999986552 22333332221 112
Q ss_pred eE-EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 460 AR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 460 v~-~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+. ..+..+-.++..+++.||++|-+.. ..+--|.++|+|+|+-=
T Consensus 243 ~~~l~g~~sl~el~~li~~a~l~I~~Dt-----g~~HlAaa~g~p~i~lf 287 (348)
T d1pswa_ 243 CRNLAGETQLDQAVILIAACKAIVTNDS-----GLMHVAAALNRPLVALY 287 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTSSEEEEESS-----HHHHHHHHTTCCEEEEE
T ss_pred cccccCCccHHHHHHHHhcceeEeecCc-----cHHHHHHHcCCCEEEEE
Confidence 33 3345566777789999999997765 44566999999998763
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=94.31 E-value=0.27 Score=48.97 Aligned_cols=129 Identities=8% Similarity=-0.050 Sum_probs=75.9
Q ss_pred EEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEE-ecCC--hhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--Hh
Q 007212 405 VIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVL-GTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AG 477 (612)
Q Consensus 405 ~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lviv-G~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~ 477 (612)
+++..|... ...-.+.++++++++ ..+++++ +... ......-.......+.++.....++... ++ ..
T Consensus 291 v~~~~gs~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~Pq~~---lL~hp~ 364 (473)
T d2pq6a1 291 VYVNFGSTTVMTPEQLLEFAWGLANC---KKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDK---VLNHPS 364 (473)
T ss_dssp EEEECCSSSCCCHHHHHHHHHHHHHT---TCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHH---HHTSTT
T ss_pred eeeccCccccccHHHHHHHHHHHHhc---CCeEEEEEccCCcccccccCcccchhhccCceEEeeeCCHHH---HhcCCc
Confidence 444444443 233345566666655 4555543 3211 1111111122223455687666666554 46 67
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccce-ecCcceEEecccccccccCC-CCCHHHHHHHHHHHH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVD-PVDVAAVSTTVRRAL 551 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~~~~~~~~~~~~v~-~~d~~~la~~i~~ll 551 (612)
++++|. -|=..++.||+.+|+|.|+....+ ...-+ +..+.|... + .-+.++++++|++++
T Consensus 365 ~~~fIt----HGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l----------~~~~t~~~l~~ai~~vl 430 (473)
T d2pq6a1 365 IGGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI----------DTNVKREELAKLINEVI 430 (473)
T ss_dssp EEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC----------CSSCCHHHHHHHHHHHH
T ss_pred CcEEEe----cCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEee----------CCCcCHHHHHHHHHHHH
Confidence 788883 344568999999999999987532 33334 443678764 3 247899999999999
Q ss_pred Hh
Q 007212 552 AT 553 (612)
Q Consensus 552 ~~ 553 (612)
++
T Consensus 431 ~d 432 (473)
T d2pq6a1 431 AG 432 (473)
T ss_dssp TS
T ss_pred cC
Confidence 98
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=87.65 E-value=0.82 Score=45.21 Aligned_cols=86 Identities=9% Similarity=-0.139 Sum_probs=54.4
Q ss_pred CCceEEEeccChHHHHHHH--HhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccce-ecCcceEEecccc
Q 007212 457 PEKARGVAKFNIPLAHMII--AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFS 529 (612)
Q Consensus 457 ~~~v~~~~~~~~~~~~~i~--~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~~~~~~~ 529 (612)
++++.....++... ++ ..++++|. -|=..++.||+.+|+|+|+...-+ ....+ +.-+.|......
T Consensus 333 ~~nv~~~~w~Pq~~---lL~hp~~~~fVt----HGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~- 404 (471)
T d2vcha1 333 KRGFVIPFWAPQAQ---VLAHPSTGGFLT----HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG- 404 (471)
T ss_dssp TTEEEEESCCCHHH---HHHSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC-
T ss_pred CCCeeecccCCHHH---HhcCccCCEEEe----cCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecC-
Confidence 45576666666654 56 46788883 344568999999999999886532 23333 333456633100
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhh
Q 007212 530 VDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 530 ~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
-...-+.++++++|.++++++
T Consensus 405 ----~~~~~t~~~l~~ai~~vl~~~ 425 (471)
T d2vcha1 405 ----DDGLVRREEVARVVKGLMEGE 425 (471)
T ss_dssp ----TTSCCCHHHHHHHHHHHHTST
T ss_pred ----CCCcCCHHHHHHHHHHHhCCc
Confidence 001137799999999999873
|
| >d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TM1055 species: Thermotoga maritima [TaxId: 2336]
Probab=84.51 E-value=4.9 Score=34.34 Aligned_cols=139 Identities=15% Similarity=0.170 Sum_probs=79.3
Q ss_pred EEEEEccCc--cc-cCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc---------------
Q 007212 405 VIGFIGRLE--EQ-KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--------------- 466 (612)
Q Consensus 405 ~i~~iGrl~--~~-Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~--------------- 466 (612)
+|++.|... +. +-.+...+.-+.|.+.+. ++ +|.|...++..+.+-+.+.+.++.++...
T Consensus 6 v~~~~~~~~~~p~~~~~~~a~~lG~~la~~g~-~V-~~GG~~GlM~ava~ga~~~gg~viGilP~~~~~n~~~~~~i~~~ 83 (170)
T d1rcua_ 6 VVGYSGPVNKSPVSELRDICLELGRTLAKKGY-LV-FNGGRDGVMELVSQGVREAGGTVVGILPDEEAGNPYLSVAVKTG 83 (170)
T ss_dssp EEECCSCTTSTTTGGGHHHHHHHHHHHHHTTC-EE-EECCSSHHHHHHHHHHHHTTCCEEEEESTTCCCCTTCSEEEECC
T ss_pred EEEEecCCCCCcchHHHHHHHHHHHHHHHCCC-EE-ECCCccCHHHHHHHHHHhcCCccccccchhhccCcccceeEEec
Confidence 555555543 22 445555555566655676 44 55566667777777777666556544321
Q ss_pred -Ch-HHHHHHHHhccEEEEcCCCCCCcHH--HHHHHHcCCceEEcCC-CCcccceecC--cceEEecccccccccCCCCC
Q 007212 467 -NI-PLAHMIIAGADFILIPSRFEPCGLI--QLHAMRYGTVPIVAST-GGLVDTVEEG--FTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 467 -~~-~~~~~i~~~aDv~v~pS~~E~~gl~--~lEAma~G~PvI~s~~-gg~~e~v~~g--~~G~~~~~~~~~~~~v~~~d 539 (612)
+- +....++..||++|... -++|.. ++|++..++|+|+-+. |+..+++.+. ..|++-...... ..-.+|
T Consensus 84 ~~~~~Rk~~m~~~sda~I~lP--GG~GTl~El~~a~~l~KPiilln~~g~w~~~i~~~~~~~~~i~~~~~~~--i~~~~~ 159 (170)
T d1rcua_ 84 LDFQMRSFVLLRNADVVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVE--IHQAWT 159 (170)
T ss_dssp CCHHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSC--EEEESS
T ss_pred cchhhhHHHHhhcccceeeec--cccchHHHHHHHHHhCCceEEecCCCchHHHHHHHHHHCCCCCHHHcCe--EEEeCC
Confidence 11 12224678999998754 256664 8899999999998764 4554555421 133321101000 112468
Q ss_pred HHHHHHHHHH
Q 007212 540 VAAVSTTVRR 549 (612)
Q Consensus 540 ~~~la~~i~~ 549 (612)
++++.+.|++
T Consensus 160 ~ee~~~~l~~ 169 (170)
T d1rcua_ 160 VEEAVQIIEQ 169 (170)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 8888887765
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=84.18 E-value=0.3 Score=42.36 Aligned_cols=33 Identities=36% Similarity=0.641 Sum_probs=25.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||.+|+. .|++| ..|++.|+++||+|+++..+
T Consensus 1 Mki~vigG-------aG~iG---~alA~~la~~G~~V~l~~R~ 33 (212)
T d1jaya_ 1 MRVALLGG-------TGNLG---KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEeC-------CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 89988742 35555 67999999999999988644
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=80.86 E-value=0.52 Score=40.03 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=25.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++. |.+|. .++..|++.||+|+++...
T Consensus 1 MkI~IiGa--------G~iG~---~~a~~L~~~G~~V~~~~r~ 32 (167)
T d1ks9a2 1 MKITVLGC--------GALGQ---LWLTALCKQGHEVQGWLRV 32 (167)
T ss_dssp CEEEEECC--------SHHHH---HHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECc--------CHHHH---HHHHHHHHCCCceEEEEcC
Confidence 99999983 56663 4777899999999999754
|