Citrus Sinensis ID: 007224
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 612 | 2.2.26 [Sep-21-2011] | |||||||
| Q43784 | 608 | Granule-bound starch synt | N/A | no | 0.985 | 0.991 | 0.726 | 0.0 | |
| O82627 | 608 | Granule-bound starch synt | N/A | no | 0.988 | 0.995 | 0.721 | 0.0 | |
| Q00775 | 607 | Granule-bound starch synt | N/A | no | 0.988 | 0.996 | 0.718 | 0.0 | |
| Q42857 | 608 | Granule-bound starch synt | N/A | no | 0.986 | 0.993 | 0.715 | 0.0 | |
| Q9MAQ0 | 610 | Probable granule-bound st | yes | no | 0.991 | 0.995 | 0.692 | 0.0 | |
| Q43092 | 603 | Granule-bound starch synt | N/A | no | 0.915 | 0.928 | 0.726 | 0.0 | |
| Q8LL05 | 565 | Granule-bound starch synt | N/A | no | 0.905 | 0.980 | 0.707 | 0.0 | |
| P09842 | 603 | Granule-bound starch synt | N/A | no | 0.946 | 0.960 | 0.662 | 0.0 | |
| P0C585 | 606 | Granule-bound starch synt | no | no | 0.918 | 0.927 | 0.682 | 0.0 | |
| Q0DEV5 | 609 | Granule-bound starch synt | no | no | 0.923 | 0.927 | 0.679 | 0.0 |
| >sp|Q43784|SSG1_MANES Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/617 (72%), Positives = 514/617 (83%), Gaps = 14/617 (2%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF-----RCMKHSGLRSLNIIDDLQVKTMA 55
MAT +AA FVSRS H L +KA+ + + + +GLRSLN +D LQ+KT
Sbjct: 1 MATVIAAH-FVSRS-SHLSIHALETKANNLSHTGPWTQTITPNGLRSLNTMDKLQMKTQ- 57
Query: 56 SKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALA 115
SK A NG P+ I+CG G+N++FVG EV PWSKTGGLGDVLGGLPPA+A
Sbjct: 58 SKAVKKVSATGNG-----RPAAKIICGHGMNLIFVGAEVGPWSKTGGLGDVLGGLPPAMA 112
Query: 116 ANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAK 175
A GHRVMT++PRYDQYKDAWDT V +E+K+GD+IE VRFFH +KRGVDRVFVDHP FL K
Sbjct: 113 ARGHRVMTVSPRYDQYKDAWDTSVSVEIKIGDRIETVRFFHSYKRGVDRVFVDHPMFLEK 172
Query: 176 VVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVA 235
V WGKT SKIYGPR G DYQDNQLRFSLLC AALEAPR+LNLNS+K FSGPYGE+V F+A
Sbjct: 173 V-WGKTGSKIYGPRAGLDYQDNQLRFSLLCLAALEAPRVLNLNSSKNFSGPYGEEVAFIA 231
Query: 236 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 295
NDWHT+L+PCYLK +Y+P G+YK AKV FCIHNIAYQGRFAF DF LNLP +FKSSFDF
Sbjct: 232 NDWHTALLPCYLKAIYQPMGIYKHAKVAFCIHNIAYQGRFAFSDFPRLNLPDKFKSSFDF 291
Query: 296 IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIV 355
IDGY KPV+GRKINWMKAGILESD VLTVSP+YAQE++SG ++GVELDN IRKTGI GI+
Sbjct: 292 IDGYEKPVKGRKINWMKAGILESDRVLTVSPYYAQEVISGVERGVELDNFIRKTGIAGII 351
Query: 356 NGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQ 415
NGMDVQEWNP+TDKYI + YDA+TVMDAKPLLKEALQAEVGLPVDRN+P+IGFIGRLEEQ
Sbjct: 352 NGMDVQEWNPVTDKYIDIHYDATTVMDAKPLLKEALQAEVGLPVDRNVPLIGFIGRLEEQ 411
Query: 416 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475
KGSDI AAI ++ NVQI++LGTGKK EKQ+E LE+LYP+KARGVAKFN+PLAHMI
Sbjct: 412 KGSDIFVAAISQLVEHNVQIVILGTGKKKFEKQIEHLEVLYPDKARGVAKFNVPLAHMIT 471
Query: 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 535
AGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EG+TGFQMG+ V+C+ +
Sbjct: 472 AGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGYTGFQMGALHVECDKI 531
Query: 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPG 595
D DVAA+ TV RAL TY T AL EM+ N MAQDLSWKGPA+ WE+ LL+LEV GSEPG
Sbjct: 532 DSADVAAIVKTVARALGTYATAALREMILNCMAQDLSWKGPARMWEKMLLDLEVTGSEPG 591
Query: 596 IDGEEIAPLAKENVATP 612
+GEEIAPLAKENV TP
Sbjct: 592 TEGEEIAPLAKENVPTP 608
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Responsible for the synthesis of amylose in reserve starch. Manihot esculenta (taxid: 3983) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 4EC: 2 |
| >sp|O82627|SSG1_ANTMA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1 | Back alignment and function description |
|---|
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/615 (72%), Positives = 510/615 (82%), Gaps = 10/615 (1%)
Query: 1 MATAVAASSFVSRSYGHEVAS-GLNSKASQMKFRCMK--HSGLRSLNIIDDLQVKTMASK 57
MAT V AS VS +G +S + +Q+ R + H+GLRS+N++D LQ++ A +
Sbjct: 1 MAT-VTASQLVSHVHGGATSSPDTKTNLAQVGLRNQQFTHNGLRSINMVDKLQMRNNAKQ 59
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN 117
+ + NG P I+CG G+N++FV EV PWSKTGGLGDV+GGLPPA+A N
Sbjct: 60 SRSLVKKTDNG-----SPLGKIICGTGMNLVFVLAEVGPWSKTGGLGDVVGGLPPAMAGN 114
Query: 118 GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVV 177
GHRVMT++PRYDQYKDAWDT VV+E+KVGD IE VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 GHRVMTVSPRYDQYKDAWDTSVVVEIKVGDSIETVRFFHCYKRGVDRVFVDHPIFLEKV- 173
Query: 178 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 237
WGKT+SKIYGP G DYQDNQLRFSLLCQAALEAPR+LNL S+KYFSGPYGEDVVFVAND
Sbjct: 174 WGKTKSKIYGPNAGTDYQDNQLRFSLLCQAALEAPRVLNLTSSKYFSGPYGEDVVFVAND 233
Query: 238 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 297
WHT+L+PCYLK+MY+ KGMY AKV FCIHNIAYQGRF DF LLNLP QFKSSFDF D
Sbjct: 234 WHTALLPCYLKSMYQSKGMYLHAKVAFCIHNIAYQGRFGSSDFCLLNLPDQFKSSFDFFD 293
Query: 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 357
GY KPV+GRKINWMKAGILESD V+TVSP+YA ELVSG +KGVELDN+I KT I GIVNG
Sbjct: 294 GYEKPVKGRKINWMKAGILESDRVVTVSPYYAMELVSGAEKGVELDNVIAKTSITGIVNG 353
Query: 358 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 417
MD QEWNP TDK+I YD +TVMDAKPLLKEALQA VGLPVD+NIPVIGFIGRLEEQKG
Sbjct: 354 MDTQEWNPATDKHIDTNYDITTVMDAKPLLKEALQAAVGLPVDKNIPVIGFIGRLEEQKG 413
Query: 418 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477
SDIL AAI F+ +VQII+LGTGKK E+Q+++LE+LYP+KARGVAKFN+PLAHMI AG
Sbjct: 414 SDILVAAISKFVGLDVQIIILGTGKKKFEQQIQELEVLYPDKARGVAKFNVPLAHMITAG 473
Query: 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537
ADF+L+PSRFEPCGLIQLHAMRYGT+PI ASTGGLVDTV EGFTGF MG+F+V+C VDP
Sbjct: 474 ADFMLVPSRFEPCGLIQLHAMRYGTIPICASTGGLVDTVTEGFTGFHMGAFNVECATVDP 533
Query: 538 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 597
DV ++TTV RALA YG+ A EM++N MAQDLSWKGPAK WE+ LL+L V+GSEPG+D
Sbjct: 534 ADVQKIATTVERALAAYGSVAYKEMIQNCMAQDLSWKGPAKNWEKMLLSLGVSGSEPGVD 593
Query: 598 GEEIAPLAKENVATP 612
GEEIAPLAKENVATP
Sbjct: 594 GEEIAPLAKENVATP 608
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Antirrhinum majus (taxid: 4151) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|Q00775|SSG1_SOLTU Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/614 (71%), Positives = 511/614 (83%), Gaps = 9/614 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTMASKL 58
MA+ A+ FVSRS + + S SQ+ R + H+GLR++N +D LQ +T
Sbjct: 1 MASITASHHFVSRS---QTSLDTKSTLSQIGLRNHTLTHNGLRAVNKLDGLQSRTNTK-- 55
Query: 59 ATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG 118
T + A R + + G S IVCG G+N++FVGTEV PWSKTGGLGDVLGGLPPALAA G
Sbjct: 56 VTPKMASRTETK-RPGCSATIVCGKGMNLIFVGTEVGPWSKTGGLGDVLGGLPPALAARG 114
Query: 119 HRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVW 178
HRVMTI+PRYDQYKDAWDT V +E+KVGD IE VRFFHC+KRGVDRVFVDHP FL KV W
Sbjct: 115 HRVMTISPRYDQYKDAWDTSVAVEVKVGDSIEIVRFFHCYKRGVDRVFVDHPMFLEKV-W 173
Query: 179 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW 238
GKT SKIYGP+ G DY DN+LRFSLLCQAALEAP++LNLNS+ YFSGPYGEDV+F+ANDW
Sbjct: 174 GKTGSKIYGPKAGLDYLDNELRFSLLCQAALEAPKVLNLNSSNYFSGPYGEDVLFIANDW 233
Query: 239 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 298
HT+LIPCYLK+MY+ +G+Y +AKV FCIHNIAYQGRF+F DF LLNLP +F+ SFDFIDG
Sbjct: 234 HTALIPCYLKSMYQSRGIYLNAKVAFCIHNIAYQGRFSFSDFPLLNLPDEFRGSFDFIDG 293
Query: 299 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 358
Y KPV+GRKINWMKAGILES V+TVSP+YAQELVS DKGVELD+++RKT I GIVNGM
Sbjct: 294 YEKPVKGRKINWMKAGILESHRVVTVSPYYAQELVSAVDKGVELDSVLRKTCITGIVNGM 353
Query: 359 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 418
D QEWNP TDKY VKYD +TVMDAKPLLKEALQA VGLPVD+ IP+IGFIGRLEEQKGS
Sbjct: 354 DTQEWNPATDKYTDVKYDITTVMDAKPLLKEALQAAVGLPVDKKIPLIGFIGRLEEQKGS 413
Query: 419 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478
DIL AAI FI +VQI+VLGTGKK E+++EQLE+LYP KA+GVAKFN+PLAHMI AGA
Sbjct: 414 DILVAAIHKFIGLDVQIVVLGTGKKEFEQEIEQLEVLYPNKAKGVAKFNVPLAHMITAGA 473
Query: 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 538
DF+L+PSRFEPCGLIQLHAMRYGTVPI ASTGGLVDTV+EG+TGF MG+F+V+C+ VDP
Sbjct: 474 DFMLVPSRFEPCGLIQLHAMRYGTVPICASTGGLVDTVKEGYTGFHMGAFNVECDVVDPA 533
Query: 539 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDG 598
DV + TTV RALA YGT A AEM+KN M+++LSWK PAKKWE LL L +GSEPG++G
Sbjct: 534 DVLKIVTTVARALAVYGTLAFAEMIKNCMSEELSWKEPAKKWETLLLGLGASGSEPGVEG 593
Query: 599 EEIAPLAKENVATP 612
EEIAPLAKENVATP
Sbjct: 594 EEIAPLAKENVATP 607
|
Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q42857|SSG1_IPOBA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2 | Back alignment and function description |
|---|
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/616 (71%), Positives = 504/616 (81%), Gaps = 12/616 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTMASKL 58
MAT + AS FVS G + Q+ R + H+GLR +N ID LQ++T A K
Sbjct: 1 MAT-ITASHFVSHVCGGATSGESKVGLGQLALRSQAVTHNGLRPVNKIDMLQLRTSAKK- 58
Query: 59 ATSRQAGRNGFRSQNGPSL-MIVCGV-GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
+NG ++ G + IVC G+N++FVG EV PW KTGGLGDVLGGLPPALAA
Sbjct: 59 -----PSKNGRENEGGMAAGTIVCKQQGMNLVFVGCEVGPWCKTGGLGDVLGGLPPALAA 113
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT VV+EL+VGD+IE VRFFH +KRGVDRVFVDHP FL KV
Sbjct: 114 RGHRVMTVCPRYDQYKDAWDTCVVVELQVGDRIEPVRFFHSYKRGVDRVFVDHPMFLEKV 173
Query: 177 VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 236
WGKT S +YGP+ G+DY+DNQLRFSLLCQAALEAPR+LNLNS+ YFSGPYGEDVVFVAN
Sbjct: 174 -WGKTGSMLYGPKAGKDYKDNQLRFSLLCQAALEAPRVLNLNSSNYFSGPYGEDVVFVAN 232
Query: 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 296
DWHT+L+PCYLKTMY+ +G+Y +AKV FCIHNIAYQGRFAF DF LLNLP ++K SFDFI
Sbjct: 233 DWHTALLPCYLKTMYQSRGIYMNAKVAFCIHNIAYQGRFAFSDFSLLNLPDEYKGSFDFI 292
Query: 297 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356
DGY+KPV+GRKINWMKAGI E+D V TVSP+YA+ELVS KGVELDN IR GI GI N
Sbjct: 293 DGYDKPVKGRKINWMKAGIREADRVFTVSPNYAKELVSCVSKGVELDNHIRDCGITGICN 352
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 416
GMD QEWNP TDKY+ VKYD +TVM AKPLLKEALQA VGLPVDRNIP+IGFIGRLEEQK
Sbjct: 353 GMDTQEWNPATDKYLAVKYDITTVMQAKPLLKEALQAAVGLPVDRNIPLIGFIGRLEEQK 412
Query: 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476
GSDIL AAI FI +VQI++LGTGKK E+Q+EQLE++YP+KARGVAKFN+PLAHMI A
Sbjct: 413 GSDILYAAISKFISMDVQILILGTGKKKFEQQIEQLEVMYPDKARGVAKFNVPLAHMITA 472
Query: 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536
GADF+LIPSRFEPCGLIQLHAMRYGT I ASTGGLVDTV+EG+TGF MG+F+VDCE VD
Sbjct: 473 GADFMLIPSRFEPCGLIQLHAMRYGTPCICASTGGLVDTVKEGYTGFHMGAFNVDCETVD 532
Query: 537 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGI 596
P DV V TTV RALA YGT A EM+KN M+Q+LSWKGPAK WE LL+L VAGSEPG+
Sbjct: 533 PEDVLKVITTVGRALAMYGTLAFTEMIKNCMSQELSWKGPAKNWETVLLSLGVAGSEPGV 592
Query: 597 DGEEIAPLAKENVATP 612
+G+EIAPLAKENVATP
Sbjct: 593 EGDEIAPLAKENVATP 608
|
Required for the synthesis of amylose. Ipomoea batatas (taxid: 4120) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q9MAQ0|SSG1_ARATH Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1 | Back alignment and function description |
|---|
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/615 (69%), Positives = 503/615 (81%), Gaps = 8/615 (1%)
Query: 1 MATAVAASSFVSRSY---GHEVASGLNSKASQMKFRCMKHSGLRSLNIIDDLQVKTMASK 57
MAT A+S+FVSR+ H +S + +K + + H GLRS N++D+LQ ++ A
Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQAKP 60
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN 117
++ + ++ IVC G++++F+G EV PWSKTGGLGDVLGGLPPALAA
Sbjct: 61 VSAKSSKRSSKVKTAG----KIVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAAR 116
Query: 118 GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVV 177
GHRVMTI PRYDQYKDAWDT VV+++KVGDK+E VRFFHC+KRGVDRVFVDHP FLAKVV
Sbjct: 117 GHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVV 176
Query: 178 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 237
GKT SKIYGP TG DY DNQLRFSLLCQAALEAP++LNLNS+KYFSGPYGEDVVFVAND
Sbjct: 177 -GKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVAND 235
Query: 238 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 297
WHT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+D
Sbjct: 236 WHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMD 295
Query: 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 357
GY KPV+GRKINWMKA ILE+ VLTVSP+YAQEL+SG D+GVEL +R + GI+NG
Sbjct: 296 GYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIING 355
Query: 358 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 417
MDVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKG
Sbjct: 356 MDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKG 415
Query: 418 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477
SDIL AI F+ NVQ+++LGTGKK ME Q+ +LE +P KA GVAKFN+PLAHMI AG
Sbjct: 416 SDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAG 475
Query: 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537
ADFI++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP
Sbjct: 476 ADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDP 535
Query: 538 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 597
DV A + V RA+A YGT A+ EM+KN M QD SWKGPA+ WE+ LL+L VAGSE G +
Sbjct: 536 DDVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTE 595
Query: 598 GEEIAPLAKENVATP 612
GEEIAPLAKENVATP
Sbjct: 596 GEEIAPLAKENVATP 610
|
Required for the synthesis of amylose in endosperm. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q43092|SSG1_PEA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/574 (72%), Positives = 481/574 (83%), Gaps = 14/574 (2%)
Query: 39 GLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWS 98
GLRSLN L V+T + +S + ++ + IVCG+ L +FVG EV PWS
Sbjct: 44 GLRSLN---KLHVRTARATSGSSDTSEKSLGK--------IVCGMSL--VFVGAEVGPWS 90
Query: 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCH 158
KTGGLGDVLGGLPP LA NGHRVMT++PRYDQYKDAWDT+V++E+KVGDKIE VRFFHC+
Sbjct: 91 KTGGLGDVLGGLPPVLAGNGHRVMTVSPRYDQYKDAWDTNVLVEVKVGDKIETVRFFHCY 150
Query: 159 KRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLN 218
KRGVDRVFVDHP FL +V WGKT SK+YGP+TG DY+DNQLRFSLLCQAALEAPR+LNLN
Sbjct: 151 KRGVDRVFVDHPLFLERV-WGKTGSKLYGPKTGIDYRDNQLRFSLLCQAALEAPRVLNLN 209
Query: 219 SNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFE 278
S+KYFSGPYGEDV+FVANDWH++LIPCYLK+MYK +G+YK+AKV FCIHNIAYQGR AF
Sbjct: 210 SSKYFSGPYGEDVIFVANDWHSALIPCYLKSMYKSRGLYKNAKVAFCIHNIAYQGRNAFS 269
Query: 279 DFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK 338
DF LLNLP +F+SSFDFIDGYNKP G+KINWMKAGILESD V TVSPHYA+EL+SGED+
Sbjct: 270 DFSLLNLPDEFRSSFDFIDGYNKPCEGKKINWMKAGILESDQVFTVSPHYAKELISGEDR 329
Query: 339 GVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398
GVELDNIIR TGI GIVNGMD +EW+P TD+YI V Y+ +TV +AKPLLK LQAE+GLP
Sbjct: 330 GVELDNIIRSTGIIGIVNGMDNREWSPQTDRYIDVHYNETTVTEAKPLLKGTLQAEIGLP 389
Query: 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE 458
VD +IP+IGFIGRLEEQKGSDIL AI F ENVQI+VLGTGKK MEKQ+E LE YP
Sbjct: 390 VDSSIPLIGFIGRLEEQKGSDILVEAIAKFADENVQIVVLGTGKKIMEKQIEVLEEKYPG 449
Query: 459 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 518
KA G+ KFN PLAH IIAGADFI+IPSRFEPCGL+QLHAM YGTVPIV+STGGLVDTV+E
Sbjct: 450 KAIGITKFNSPLAHKIIAGADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVKE 509
Query: 519 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAK 578
G+TGF G F V+CE VDP DV ++ TV+RAL TYGTQA+ +++ N MAQ+ SWK PAK
Sbjct: 510 GYTGFHAGPFDVECEDVDPDDVDKLAATVKRALKTYGTQAMKQIILNCMAQNFSWKKPAK 569
Query: 579 KWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 612
WE+ LLNLEV G+ GIDG+EIAPLAKENVATP
Sbjct: 570 LWEKALLNLEVTGNVAGIDGDEIAPLAKENVATP 603
|
May be responsible for the synthesis of amylose. Pisum sativum (taxid: 3888) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q8LL05|SSG1B_HORVU Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1 | Back alignment and function description |
|---|
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/560 (70%), Positives = 459/560 (81%), Gaps = 6/560 (1%)
Query: 54 MASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
+A + AT+ + RN R+ S IVC G+ I+FV TEV PW KTGGLGDV+GGLPPA
Sbjct: 11 LAKRRATNYETHRNSSRT----SSPIVCSTGMPIIFVATEVHPWCKTGGLGDVVGGLPPA 66
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
LAA GHRVMTIAPRYDQYKD WDT+V++E+ VGD+ E VRFFHC+KRGVDRVFVDHP FL
Sbjct: 67 LAAMGHRVMTIAPRYDQYKDTWDTNVLVEVIVGDRTETVRFFHCYKRGVDRVFVDHPMFL 126
Query: 174 AKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVF 233
K VWGKT SK+YGP TG D++DNQLRF LLC AALEAPR+LNLN+++YFSGPYGE+VVF
Sbjct: 127 EK-VWGKTGSKLYGPTTGTDFRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVF 185
Query: 234 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSF 293
VANDWHT+++PCYLK+MYK G+Y++AKV FCIHNIAYQGRF DF LLNLP F SF
Sbjct: 186 VANDWHTAVLPCYLKSMYKQNGIYENAKVAFCIHNIAYQGRFPRADFELLNLPESFMPSF 245
Query: 294 DFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK- 352
DF+DG+ KPV GRKINWMKAGI E D+VLTVSPHY +EL SG +KGVELD ++R ++
Sbjct: 246 DFVDGHVKPVVGRKINWMKAGITECDVVLTVSPHYVKELTSGPEKGVELDGVLRTKPLET 305
Query: 353 GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL 412
GIVNGMDV +WNP TDKYI VKY+A+TV A+ L KE LQAEVGL VD +IPVI FIGRL
Sbjct: 306 GIVNGMDVIDWNPATDKYISVKYNATTVAQARALNKEILQAEVGLSVDSSIPVIVFIGRL 365
Query: 413 EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 472
EEQKGSDIL AA P F++ENVQIIVLGTGKK ME++L LE+ YP+ ARG+AKFN+PLAH
Sbjct: 366 EEQKGSDILIAASPEFVEENVQIIVLGTGKKKMEEELMLLEVKYPQNARGIAKFNVPLAH 425
Query: 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDC 532
M+ AGADFI+IPSRFEPCGLIQL M YG VPI +STGGLVDTV EG TGF MGSF+V+
Sbjct: 426 MMFAGADFIIIPSRFEPCGLIQLQGMSYGVVPICSSTGGLVDTVREGVTGFHMGSFNVEF 485
Query: 533 EAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 592
E VDP DVAAV + V RAL Y T M++N MAQDLSWKGPAKKWEE LL+L V GS
Sbjct: 486 ETVDPTDVAAVGSNVTRALKQYRTPVFHAMVQNCMAQDLSWKGPAKKWEEALLSLGVEGS 545
Query: 593 EPGIDGEEIAPLAKENVATP 612
+PGI+GEEIAPLAK+NVATP
Sbjct: 546 QPGIEGEEIAPLAKQNVATP 565
|
Involved in the synthesis of amylose in endosperm. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|P09842|SSG1_HORVU Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/586 (66%), Positives = 462/586 (78%), Gaps = 7/586 (1%)
Query: 31 KFRCMKHSGLRSLNIIDD-LQVKTMASKLA--TSRQAGRNGFRSQNGPSLMIVCGVGLNI 87
+FR GLR N D L ++T+ + A SR+A R R + ++ G G+N+
Sbjct: 21 RFRRPGFQGLRPRNPADAALGMRTIGASAAPKQSRKAHRGSRRCLS--VVVSATGSGMNL 78
Query: 88 LFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGD 147
+FVG E+APWSKTGGLGDVLGGLPPA+AANGHRVM ++PRYDQYKDAWDT V+ E+KV D
Sbjct: 79 VFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVISEIKVAD 138
Query: 148 KIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQA 207
+ E+VRFFHC+KRGVDRVF+DHPWFL KV GKT+ KIYGP G DY+DNQ RFSLLCQA
Sbjct: 139 EYERVRFFHCYKRGVDRVFIDHPWFLEKVR-GKTKEKIYGPDAGTDYEDNQQRFSLLCQA 197
Query: 208 ALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIH 267
ALEAPRILNLN+N YFSGPYGEDVVFV NDWHT L+ CYLK+ Y+ G+Y++AKV FCIH
Sbjct: 198 ALEAPRILNLNNNPYFSGPYGEDVVFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAFCIH 257
Query: 268 NIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 327
NI+YQGRF+F+DF LNLP +FKSSFDFIDGY+KPV GRKINWMKAGIL++D VLTVSP+
Sbjct: 258 NISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQADKVLTVSPY 317
Query: 328 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387
YA+EL+SGE +G ELDNI+R TGI GIVNGMDV EW+P DK++ V YD +T ++AK L
Sbjct: 318 YAEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPTKDKFLAVNYDITTALEAKALN 377
Query: 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPME 446
KEALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP +K E+VQII+LGTGKK E
Sbjct: 378 KEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQIILLGTGKKKFE 437
Query: 447 KQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV 506
K L+ +E +P K R V +FN PLAH ++AGAD + + SRFEPCGLIQL MRYGT +
Sbjct: 438 KLLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPCGLIQLQGMRYGTPCVC 497
Query: 507 ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG 566
ASTGGLVDT+ EG TGF MG SVDC V+P DV V+TT++RA+ GT A EM+KN
Sbjct: 498 ASTGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRAVKVVGTPAYQEMVKNC 557
Query: 567 MAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 612
M QDLSWKGPAK WE+ LL L V GSEPGI GEEIAPLA ENVA P
Sbjct: 558 MIQDLSWKGPAKNWEDVLLELGVEGSEPGIVGEEIAPLAMENVAAP 603
|
Required for the synthesis of amylose in endosperm. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|P0C585|SSG1_ORYSA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/567 (68%), Positives = 449/567 (79%), Gaps = 5/567 (0%)
Query: 47 DDLQVKTMASKLATSRQAGRNGFRSQNGPSLMI-VCGVGLNILFVGTEVAPWSKTGGLGD 105
D + S AT +Q S+ PS+++ G G+N++FVG E+APWSKTGGLGD
Sbjct: 44 DASSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGD 103
Query: 106 VLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165
VLGGLPPA+AANGHRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRV
Sbjct: 104 VLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRV 163
Query: 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSG 225
F+DHP FL KV WGKT KIYGP TG DY+DNQ+RFSLLCQ EAPRILNLN+N YF G
Sbjct: 164 FIDHPSFLEKV-WGKTGEKIYGPDTGVDYKDNQMRFSLLCQ---EAPRILNLNNNPYFKG 219
Query: 226 PYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNL 285
YGEDVVFV NDWHT +P YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL
Sbjct: 220 TYGEDVVFVCNDWHTGPLPSYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNL 279
Query: 286 PAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI 345
+FKSSFDFIDGY+ PV GRKINWMKAGILESD VLTVSP+YA+EL+SG +G ELDNI
Sbjct: 280 SERFKSSFDFIDGYDTPVEGRKINWMKAGILESDRVLTVSPYYAEELISGIARGCELDNI 339
Query: 346 IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405
+R TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR +P+
Sbjct: 340 MRLTGITGIVNGMDVSEWDPSKDKYITTKYDATTAIEAKALNKEALQAEAGLPVDRKVPL 399
Query: 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465
I FIGRLEEQKG D++AAAIP ++ENVQI++LGTGKK EK L+ +E YP K R V K
Sbjct: 400 IAFIGRLEEQKGPDVMAAAIPELMQENVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVK 459
Query: 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 525
FN PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF M
Sbjct: 460 FNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHM 519
Query: 526 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585
G SVDC+ V+P DV V+TT++RA+ GT A EM++N M QDLSWKGPAK WE LL
Sbjct: 520 GRLSVDCKVVEPSDVQKVATTLKRAIKIVGTPAYNEMVRNCMNQDLSWKGPAKNWENVLL 579
Query: 586 NLEVAGSEPGIDGEEIAPLAKENVATP 612
L VAGSEPG++GEEIAPLAKENVA P
Sbjct: 580 GLGVAGSEPGVEGEEIAPLAKENVAAP 606
|
Required for the synthesis of amylose in endosperm. Oryza sativa (taxid: 4530) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q0DEV5|SSG1_ORYSJ Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/567 (67%), Positives = 449/567 (79%), Gaps = 2/567 (0%)
Query: 47 DDLQVKTMASKLATSRQAGRNGFRSQNGPSLMI-VCGVGLNILFVGTEVAPWSKTGGLGD 105
D + S AT +Q S+ PS+++ G G+N++FVG E+APWSKTGGLGD
Sbjct: 44 DATSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGD 103
Query: 106 VLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165
VLGGLPPA+AANGHRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRV
Sbjct: 104 VLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRV 163
Query: 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSG 225
F+DHP FL KV WGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G
Sbjct: 164 FIDHPSFLEKV-WGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKG 222
Query: 226 PYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNL 285
YGEDVVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL
Sbjct: 223 TYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNL 282
Query: 286 PAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI 345
+F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI
Sbjct: 283 SERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNI 342
Query: 346 IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405
+R TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+
Sbjct: 343 MRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPL 402
Query: 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465
I FIGRLEEQKG D++AAAIP ++E+VQI++LGTGKK EK L+ +E YP K R V K
Sbjct: 403 IAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVK 462
Query: 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 525
FN PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF M
Sbjct: 463 FNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHM 522
Query: 526 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585
G SVDC+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL
Sbjct: 523 GRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLL 582
Query: 586 NLEVAGSEPGIDGEEIAPLAKENVATP 612
L VAGS PGI+G+EIAPLAKENVA P
Sbjct: 583 GLGVAGSAPGIEGDEIAPLAKENVAAP 609
|
Required for the synthesis of amylose in endosperm. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 612 | ||||||
| 375151860 | 611 | GBSSII-2 [Citrus sinensis] | 0.998 | 1.0 | 0.996 | 0.0 | |
| 375151864 | 618 | GBSSII-2 [Prunus persica] | 0.946 | 0.936 | 0.796 | 0.0 | |
| 182636946 | 615 | granule bound starch synthase Ib precurs | 0.972 | 0.967 | 0.777 | 0.0 | |
| 223029784 | 615 | granule-bound starch synthase [Nelumbo n | 0.993 | 0.988 | 0.759 | 0.0 | |
| 225466653 | 614 | PREDICTED: granule-bound starch synthase | 0.991 | 0.988 | 0.757 | 0.0 | |
| 197725528 | 615 | granule-bound starch synthase [Nelumbo n | 0.995 | 0.990 | 0.760 | 0.0 | |
| 170676395 | 614 | granule bound starch synthase Ib precurs | 0.965 | 0.962 | 0.765 | 0.0 | |
| 258489621 | 609 | granule-bound starch synthase 1 [Gossypi | 0.988 | 0.993 | 0.740 | 0.0 | |
| 211906484 | 609 | granule bound starch synthase [Gossypium | 0.988 | 0.993 | 0.737 | 0.0 | |
| 211906516 | 609 | granule bound starch synthase [Gossypium | 0.988 | 0.993 | 0.738 | 0.0 |
| >gi|375151860|gb|AFA36446.1| GBSSII-2 [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 1237 bits (3201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/612 (99%), Positives = 611/612 (99%), Gaps = 1/612 (0%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIIDDLQVKTMASKLAT 60
MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIID+LQVKTMASKLAT
Sbjct: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIIDELQVKTMASKLAT 60
Query: 61 SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR 120
SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR
Sbjct: 61 SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR 120
Query: 121 VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGK 180
VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV WGK
Sbjct: 121 VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV-WGK 179
Query: 181 TQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 240
TQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT
Sbjct: 180 TQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 239
Query: 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYN 300
SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYN
Sbjct: 240 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYN 299
Query: 301 KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV 360
KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV
Sbjct: 300 KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV 359
Query: 361 QEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDI 420
QEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDI
Sbjct: 360 QEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDI 419
Query: 421 LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480
LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF
Sbjct: 420 LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479
Query: 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 540
ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV
Sbjct: 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 539
Query: 541 AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEE 600
AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEE
Sbjct: 540 AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEE 599
Query: 601 IAPLAKENVATP 612
IAPLAKENVATP
Sbjct: 600 IAPLAKENVATP 611
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375151864|gb|AFA36448.1| GBSSII-2 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/581 (79%), Positives = 519/581 (89%), Gaps = 2/581 (0%)
Query: 33 RCMKHSGLRSLNIIDDLQVKTMASKLA-TSRQAGRNGFRSQNGPSLMIVCGVGLNILFVG 91
+ M H+GLR+LN +D+L+VK M + +A +R N R+ + P+ IVCG G+N++F+G
Sbjct: 39 QAMTHNGLRALNTVDELRVKIMGNSIARQARSKSFNSTRTGSRPAGTIVCGSGMNLVFLG 98
Query: 92 TEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEK 151
TEV PWSKTGGLGDVLGGLPPA+AANGHRVMT++PRYDQYKDAWDT+V IE+KVG+K EK
Sbjct: 99 TEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTVSPRYDQYKDAWDTEVTIEVKVGEKTEK 158
Query: 152 VRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA 211
VRFFHC+KRGVDRVFVDHP FL KV WGKT SKIYGP GED++DNQLRFSLLC+AALEA
Sbjct: 159 VRFFHCYKRGVDRVFVDHPLFLEKV-WGKTASKIYGPIAGEDFKDNQLRFSLLCRAALEA 217
Query: 212 PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAY 271
PR+LNLNS+KYFSGPYGE+VVF+ANDWHT+L+PCYLK +Y+PKG+Y+SAKV FCIHNIAY
Sbjct: 218 PRVLNLNSSKYFSGPYGEEVVFIANDWHTALLPCYLKAIYQPKGIYRSAKVAFCIHNIAY 277
Query: 272 QGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 331
QGRFA DF LLNLP +FKSSFDFIDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+E
Sbjct: 278 QGRFASADFALLNLPDEFKSSFDFIDGYDKPVKGRKINWMKAGILESDKVLTVSPYYAEE 337
Query: 332 LVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391
LVS +KGVELDN+IRK GI GIVNGMDVQEWNPLTDKY KYDASTV DAKPLLKEAL
Sbjct: 338 LVSTVEKGVELDNVIRKAGILGIVNGMDVQEWNPLTDKYTAAKYDASTVTDAKPLLKEAL 397
Query: 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQ 451
QAEVGLPVDR+IPVIGFIGRLEEQKGSDIL AIPHFIKENVQIIVLGTGKKPMEKQLEQ
Sbjct: 398 QAEVGLPVDRDIPVIGFIGRLEEQKGSDILIEAIPHFIKENVQIIVLGTGKKPMEKQLEQ 457
Query: 452 LEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 511
LEI YP+KARGVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGG
Sbjct: 458 LEIKYPDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGG 517
Query: 512 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDL 571
LVDTV+EGFTGFQMG F+V+CE VDP DV A++TTV RAL TYGT A E++ N MAQDL
Sbjct: 518 LVDTVKEGFTGFQMGGFNVECEVVDPADVQAIATTVTRALGTYGTPAFTEIIGNCMAQDL 577
Query: 572 SWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 612
SWKGPAKKWEE LLNL V SEPGIDGEEIAPLAKEN+ATP
Sbjct: 578 SWKGPAKKWEEVLLNLGVVDSEPGIDGEEIAPLAKENIATP 618
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|182636946|gb|ACB97678.1| granule bound starch synthase Ib precursor [Malus x domestica] gi|357528262|gb|AET80370.1| granule-bound starch synthase GBSS2 [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/603 (77%), Positives = 529/603 (87%), Gaps = 8/603 (1%)
Query: 14 SYGHEVASGLNSKA--SQMKF--RCMKHSGLRSLNIIDDLQVKTMASKLATSRQAGRNGF 69
SYG V+SG + K +M F + + H+GLR+LN +D+L+V+ MA+ +A RQ
Sbjct: 17 SYG-AVSSGSDPKTGFKKMSFGKQTLTHNGLRALNSVDELRVRIMANSVA--RQTRGKTV 73
Query: 70 RSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129
S S +IVCG G+N++F+GTEV PWSKTGGLGDVLGGLPPA+AANGHRVMTI+PRYD
Sbjct: 74 NSTRKTSGVIVCGSGMNLVFLGTEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTISPRYD 133
Query: 130 QYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPR 189
QYKDAWDT+V +ELKVGDK E VRFFHC+KRGVDRVFVDHP FL KV WGKT SKIYGP
Sbjct: 134 QYKDAWDTEVTVELKVGDKTETVRFFHCYKRGVDRVFVDHPLFLEKV-WGKTASKIYGPV 192
Query: 190 TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKT 249
G D++DNQLRFSLLCQAAL APR+LNLNS+KYFSGPYGE+VVF+ANDWHT+L+PCYLK
Sbjct: 193 AGVDFKDNQLRFSLLCQAALVAPRVLNLNSSKYFSGPYGEEVVFIANDWHTALLPCYLKA 252
Query: 250 MYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309
+YKPKG+YK+AKV FCIHNIAYQGRFAF DF LLNLP +FKSSFDFIDGYNKPV+GRKIN
Sbjct: 253 IYKPKGIYKTAKVAFCIHNIAYQGRFAFADFALLNLPNEFKSSFDFIDGYNKPVKGRKIN 312
Query: 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDK 369
WMKAGILESD VLTVSP+YA+ELVS +KGVELDNI+RK+ I+GIVNGMDVQEWNP+TDK
Sbjct: 313 WMKAGILESDKVLTVSPYYAEELVSSVEKGVELDNILRKSRIQGIVNGMDVQEWNPVTDK 372
Query: 370 YIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 429
Y VKYDASTV DAKPLLKEALQAEVGLPVDR+IPVIGFIGRLEEQKGSDIL AIPHFI
Sbjct: 373 YTTVKYDASTVADAKPLLKEALQAEVGLPVDRDIPVIGFIGRLEEQKGSDILIEAIPHFI 432
Query: 430 KENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEP 489
KENVQIIVLGTGKKPMEKQLEQLE YP+KARG+AKFN+PLAHMI AGADF+L+PSRFEP
Sbjct: 433 KENVQIIVLGTGKKPMEKQLEQLETEYPDKARGIAKFNVPLAHMITAGADFMLVPSRFEP 492
Query: 490 CGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549
CGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGF MG+F+V+CE VDPVDV A++TTV R
Sbjct: 493 CGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFHMGAFNVECEVVDPVDVQAIATTVTR 552
Query: 550 ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENV 609
AL +YGT A E++ N MAQDLSWKGPAKKWEE LL+L VA SE GI+GEEIAPLAKENV
Sbjct: 553 ALGSYGTPAFTEIISNCMAQDLSWKGPAKKWEEVLLSLGVANSELGIEGEEIAPLAKENV 612
Query: 610 ATP 612
ATP
Sbjct: 613 ATP 615
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223029784|gb|ACM78591.1| granule-bound starch synthase [Nelumbo nucifera] | Back alignment and taxonomy information |
|---|
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/619 (75%), Positives = 532/619 (85%), Gaps = 11/619 (1%)
Query: 1 MATAVAASSFVSRS----YGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS FVS S YG S + +Q+ R M H GLRS+N +D L ++
Sbjct: 1 MAT-VTASKFVSTSSLVSYGGMSGSQPKTALAQIGLRNQTMTHHGLRSVNNVDKLNLRAN 59
Query: 55 ASKLATSRQAGRNGFRSQNGPSLMIV-CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
A T+ QA +++N ++ CG G+N++FVG EV PWSKTGGLGDVLGGLPPA
Sbjct: 60 AK--TTTGQAKGKECKTRNAKERSVIRCGSGMNLVFVGAEVGPWSKTGGLGDVLGGLPPA 117
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
+AANGHRVMT+APRYDQYKDAWDT V++E+KVGD+IE VRFFHC+KRGVDRVFVDHP FL
Sbjct: 118 MAANGHRVMTVAPRYDQYKDAWDTSVLVEIKVGDRIETVRFFHCYKRGVDRVFVDHPMFL 177
Query: 174 AKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVF 233
KV WGKT SKIYGP GEDY DNQLRFSLLCQAALEAPR+LNLNS+K+FSGPYGEDVVF
Sbjct: 178 EKV-WGKTGSKIYGPMAGEDYSDNQLRFSLLCQAALEAPRVLNLNSSKHFSGPYGEDVVF 236
Query: 234 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSF 293
+ NDWHT+L+PCYLKTMYK +G+Y++AKV FCIHNIAYQGRF+F DF LLNLP +FKSSF
Sbjct: 237 ICNDWHTALLPCYLKTMYKSRGIYRNAKVAFCIHNIAYQGRFSFSDFSLLNLPDEFKSSF 296
Query: 294 DFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG 353
DFIDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+ELVSG +KGVELDNIIRKTGI G
Sbjct: 297 DFIDGYDKPVKGRKINWMKAGILESDRVLTVSPYYAEELVSGIEKGVELDNIIRKTGITG 356
Query: 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 413
IVNG DVQEWNP TDKYI VKYDA+TVMDAKPLLKEALQ+EVGLPVDRNIPVIGFIGRLE
Sbjct: 357 IVNGTDVQEWNPTTDKYISVKYDATTVMDAKPLLKEALQSEVGLPVDRNIPVIGFIGRLE 416
Query: 414 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473
EQKGSDILAA+IP FI ENVQIIVLGTGKK EKQLEQLEI YP+KARGVAKFN+PLAHM
Sbjct: 417 EQKGSDILAASIPKFIGENVQIIVLGTGKKAFEKQLEQLEIKYPDKARGVAKFNVPLAHM 476
Query: 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 533
IIAGADF+LIPSRFEPCGLIQL M YGT+P+V+STGGLVDTV+EG+TGF MG+F+VDC+
Sbjct: 477 IIAGADFLLIPSRFEPCGLIQLQTMPYGTIPLVSSTGGLVDTVKEGYTGFHMGAFNVDCD 536
Query: 534 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSE 593
AVDP DV AV+TTV++AL TYGT A+ +M+KN MAQ+ SWKGPAKKWE LL+LEVAGSE
Sbjct: 537 AVDPADVNAVATTVKKALKTYGTSAMIQMIKNCMAQNFSWKGPAKKWESILLSLEVAGSE 596
Query: 594 PGIDGEEIAPLAKENVATP 612
PGIDGEEIAPLAKENVATP
Sbjct: 597 PGIDGEEIAPLAKENVATP 615
|
Source: Nelumbo nucifera Species: Nelumbo nucifera Genus: Nelumbo Family: Nelumbonaceae Order: Proteales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225466653|ref|XP_002273608.1| PREDICTED: granule-bound starch synthase 1, chloroplastic/amyloplastic [Vitis vinifera] gi|296089007|emb|CBI38710.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/619 (75%), Positives = 534/619 (86%), Gaps = 12/619 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASG--LNSKASQMKFR----CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS+F+ RS + + KA+ K R + H+GLR+LN +D+L +T
Sbjct: 1 MAT-VTASNFLPRSSNGNCGATCRIEKKATLTKLRPKIQILAHNGLRALNSVDELHQRTT 59
Query: 55 ASKLATSRQAGRNGFRSQN-GPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
+ +R+ R GF+++N P I+CG G++++FVGTEV PWSKTGGLGDVLGGLPPA
Sbjct: 60 ---IKVTRKGSRKGFKNENPRPWGGIICGCGMSLIFVGTEVGPWSKTGGLGDVLGGLPPA 116
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
++ANGHRVMT++PR+DQYKDAWDT V ++L VGD+ EKVRFFHC+KRGVDRVFVDHPWFL
Sbjct: 117 MSANGHRVMTVSPRFDQYKDAWDTGVTVQLNVGDRFEKVRFFHCYKRGVDRVFVDHPWFL 176
Query: 174 AKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVF 233
KV WGKT SK+YGP GED+QDNQLRFSLLCQAALEAPRILNL S+KYFSGPYGEDVVF
Sbjct: 177 EKV-WGKTGSKLYGPLAGEDFQDNQLRFSLLCQAALEAPRILNLKSSKYFSGPYGEDVVF 235
Query: 234 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSF 293
+ANDWHT+ + CYLKTMY+ KG Y +AKVVFCIHNIAYQGRFAF DF LLNLP +FKSSF
Sbjct: 236 IANDWHTAPLACYLKTMYRLKGRYGNAKVVFCIHNIAYQGRFAFADFSLLNLPDEFKSSF 295
Query: 294 DFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG 353
DF DGY KPV+GRKINWMKAGILE+D VLTVSP+YA+ELVSG +KGVELDNI+R+TGI G
Sbjct: 296 DFTDGYEKPVKGRKINWMKAGILEADKVLTVSPYYAKELVSGVEKGVELDNILRRTGITG 355
Query: 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 413
I+NGMDVQEWNPLTDKYI +KYDASTV +AK LLKEALQAE GLPVDRNIPVIGFIGRLE
Sbjct: 356 IINGMDVQEWNPLTDKYISIKYDASTVKEAKLLLKEALQAEAGLPVDRNIPVIGFIGRLE 415
Query: 414 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473
EQKGSDIL AAIP F+ NVQIIVLGTGKKPMEKQLEQLE YP+ ARGVAKFN+PLAHM
Sbjct: 416 EQKGSDILVAAIPQFVTANVQIIVLGTGKKPMEKQLEQLEKKYPDNARGVAKFNVPLAHM 475
Query: 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 533
IIAGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMGSFSV+C+
Sbjct: 476 IIAGADFLLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFSVECD 535
Query: 534 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSE 593
AVDP D AV+T+V+RALATYGT AL EM++N MAQDLSWKGPAKKWEE LL+L V GSE
Sbjct: 536 AVDPADATAVATSVKRALATYGTPALTEMVQNCMAQDLSWKGPAKKWEEVLLSLGVPGSE 595
Query: 594 PGIDGEEIAPLAKENVATP 612
PGIDGEEIAPL+KENVATP
Sbjct: 596 PGIDGEEIAPLSKENVATP 614
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|197725528|gb|ACH72975.1| granule-bound starch synthase [Nelumbo nucifera] | Back alignment and taxonomy information |
|---|
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/618 (76%), Positives = 528/618 (85%), Gaps = 9/618 (1%)
Query: 1 MATAVAASSFVSRS----YGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS FVS S YG S + +Q+ R M H GLRS+N +D L ++
Sbjct: 1 MAT-VTASKFVSTSSLVSYGGMSGSQPKTALAQIGLRNQTMTHHGLRSVNNVDKLNLRAN 59
Query: 55 ASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPAL 114
A K T R G+ +I CG G+N++FVG EV PWSKTGGLGDVLGGLPPA+
Sbjct: 60 A-KTTTGRAKGKECKTRNAKERSVIRCGSGMNLVFVGAEVGPWSKTGGLGDVLGGLPPAM 118
Query: 115 AANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLA 174
AANGHRVMT+APRYDQYKDAWDT V++E+KVGD+IE VRFFHC+KRGVDRVFVDHP FL
Sbjct: 119 AANGHRVMTVAPRYDQYKDAWDTSVLVEIKVGDRIETVRFFHCYKRGVDRVFVDHPMFLE 178
Query: 175 KVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 234
KV WGKT SKIYGP +GEDY DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYGEDVVF+
Sbjct: 179 KV-WGKTGSKIYGPMSGEDYSDNQLRFSLLCQAALEAPRVLNLNSSKPFSGPYGEDVVFI 237
Query: 235 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 294
NDWHT+L+PCYLKTMYK +G+Y++AKV FCIHNIAYQGRF+F DF LLNLP +FKSSFD
Sbjct: 238 CNDWHTALLPCYLKTMYKSRGIYRNAKVAFCIHNIAYQGRFSFSDFSLLNLPDEFKSSFD 297
Query: 295 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 354
FIDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+EL SG +KGVELDNIIRKTGI GI
Sbjct: 298 FIDGYDKPVKGRKINWMKAGILESDRVLTVSPYYAEELASGIEKGVELDNIIRKTGITGI 357
Query: 355 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE 414
VNG DVQEWNP TDKYI VKYDA+TVMDAKPLLKEALQ+EVGLPVDRNIPVIGFIGRLEE
Sbjct: 358 VNGTDVQEWNPTTDKYISVKYDATTVMDAKPLLKEALQSEVGLPVDRNIPVIGFIGRLEE 417
Query: 415 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 474
QKGSDILAA+IP FI ENVQIIVLGTGKK EKQLEQLEI YP+KARGVAKFN+PLAHMI
Sbjct: 418 QKGSDILAASIPKFIGENVQIIVLGTGKKAFEKQLEQLEIKYPDKARGVAKFNVPLAHMI 477
Query: 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA 534
IAGADF+LIPSRFEPCGLIQL M YGT+P+V+STGGLVDTV+EG+TGF MG+F+VDC+A
Sbjct: 478 IAGADFLLIPSRFEPCGLIQLQTMPYGTIPLVSSTGGLVDTVKEGYTGFHMGAFNVDCDA 537
Query: 535 VDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEP 594
VDP DV AV+TTV++AL TYGT A+ +M+KN MAQ+ SWKGPAKKWE LL+LEVAGSEP
Sbjct: 538 VDPADVNAVATTVKKALKTYGTSAMIQMIKNCMAQNFSWKGPAKKWESILLSLEVAGSEP 597
Query: 595 GIDGEEIAPLAKENVATP 612
GIDGEEIAPLAKENVATP
Sbjct: 598 GIDGEEIAPLAKENVATP 615
|
Source: Nelumbo nucifera Species: Nelumbo nucifera Genus: Nelumbo Family: Nelumbonaceae Order: Proteales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|170676395|gb|ACB30385.1| granule bound starch synthase Ib precursor [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/601 (76%), Positives = 519/601 (86%), Gaps = 10/601 (1%)
Query: 17 HEVASGLNSKASQMKFRCMK----HSGLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQ 72
H SKA+ R ++ H+GLR LN++D+L +T A QA R G + +
Sbjct: 19 HRSILSYESKAASTGLRSLRQTNTHNGLRILNLVDELLNRTPIQVKAV--QARRKGLQGK 76
Query: 73 N-GPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY 131
N P+ +I+CG +N++F+GTEV PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY
Sbjct: 77 NVRPTGVIICG--MNLIFLGTEVGPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY 134
Query: 132 KDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTG 191
KDAWDT V IE+KVGDK EKV FFHCHKRGVDRVFVDHP FL KV WGK+ +K+YGP G
Sbjct: 135 KDAWDTSVTIEVKVGDKTEKVGFFHCHKRGVDRVFVDHPIFLEKV-WGKSGTKLYGPTAG 193
Query: 192 EDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMY 251
EDYQDNQLRFSL CQAALEAPR+LNL SNKYFSGPYGEDV+F+ANDWHT+LIPCYLK+MY
Sbjct: 194 EDYQDNQLRFSLFCQAALEAPRVLNLTSNKYFSGPYGEDVIFIANDWHTALIPCYLKSMY 253
Query: 252 KPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM 311
+ G+YK+A+VV+CIHNIAYQGRFAF DF LLNLP QFKSSFDF+DG+ KPV GRK NWM
Sbjct: 254 QSIGIYKNARVVYCIHNIAYQGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWM 313
Query: 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYI 371
KAGILESD+VLTVSP+YA+ELVSG DKGVELDNIIR+TGI GIVNGMDVQEWNP TDKY+
Sbjct: 314 KAGILESDLVLTVSPYYAEELVSGPDKGVELDNIIRRTGITGIVNGMDVQEWNPSTDKYL 373
Query: 372 GVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE 431
VKY+ASTV++ K LLKEALQAEVGLPVDRNIP+IGFIGRLEEQKGSDIL AAIP FIKE
Sbjct: 374 TVKYNASTVVEGKALLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAIPQFIKE 433
Query: 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCG 491
N+QI+ LGTGKK MEKQLEQLEI YP+KARGVAKFN+PLAHMIIAGADFILIPSRFEPCG
Sbjct: 434 NIQIVALGTGKKQMEKQLEQLEIAYPDKARGVAKFNVPLAHMIIAGADFILIPSRFEPCG 493
Query: 492 LIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551
LIQL AMRYGTVPIVASTGGLVDTV+EGFTGFQMGSF+V+CEAVDP DV A++ TV+RAL
Sbjct: 494 LIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECEAVDPADVDALAKTVKRAL 553
Query: 552 ATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVAT 611
A +GT A E++KN MAQDLSWKGPAK+WEE LL+L V GSE GI+GEEIAP AKEN+AT
Sbjct: 554 AVHGTLAFTEIIKNCMAQDLSWKGPAKRWEEVLLSLGVPGSEAGIEGEEIAPQAKENLAT 613
Query: 612 P 612
P
Sbjct: 614 P 614
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|258489621|gb|ACV72639.1| granule-bound starch synthase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/616 (74%), Positives = 524/616 (85%), Gaps = 11/616 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS + H + G ++KA+ + + M H+GLRSLN +D LQ++T +
Sbjct: 1 MAT-LTTSHFVS-TCSHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLQMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADHR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 236
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYGEDVVF+AN
Sbjct: 175 -WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIAN 233
Query: 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 296
DWH++L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFI
Sbjct: 234 DWHSALLPCYLKSMYQSRGIYMNAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFI 293
Query: 297 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356
DGYNKPV+GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVN
Sbjct: 294 DGYNKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVN 353
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 416
GMDVQEWNP +DKYI VKYDA+TVM AKPLLKEALQAEVGLP D ++P+IGFIGRLEEQK
Sbjct: 354 GMDVQEWNPASDKYISVKYDATTVMKAKPLLKEALQAEVGLPCDGDVPLIGFIGRLEEQK 413
Query: 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476
GSDILA AIP + EN QI+VLGTGKK MEKQ+EQLEI YP+ R VAKFN+PLAHMIIA
Sbjct: 414 GSDILAEAIPKLVAENCQIVVLGTGKKAMEKQIEQLEIQYPDNVRAVAKFNVPLAHMIIA 473
Query: 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536
GAD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VD
Sbjct: 474 GADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVD 533
Query: 537 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGI 596
P DV V TV+RALATYGTQAL EM++N MAQD SWKGP++ WE+ LL+L VAGSEPGI
Sbjct: 534 PSDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKMLLSLGVAGSEPGI 593
Query: 597 DGEEIAPLAKENVATP 612
+GEE+APLAKENVATP
Sbjct: 594 EGEEVAPLAKENVATP 609
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906484|gb|ACJ11735.1| granule bound starch synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/616 (73%), Positives = 522/616 (84%), Gaps = 11/616 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS S H + G ++KA+ + + M H+GLRSLN +D L+++T +
Sbjct: 1 MAT-LTTSHFVSTS-SHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLRMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + +R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADYR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 236
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYGEDVVF+AN
Sbjct: 175 -WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIAN 233
Query: 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 296
DWH++L+PCYLK+MY+ +G+Y SAKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFI
Sbjct: 234 DWHSALLPCYLKSMYQSRGIYMSAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFI 293
Query: 297 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356
DGYNKPV GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVN
Sbjct: 294 DGYNKPVMGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVN 353
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 416
GMDVQEWNP +DKYI VKYDA+T+M AKPLLKEA+Q EVGLP DR++P+IGFIGRLEEQK
Sbjct: 354 GMDVQEWNPASDKYISVKYDATTIMKAKPLLKEAIQGEVGLPCDRDVPLIGFIGRLEEQK 413
Query: 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476
GSDILA AIP EN QI+VLGTGKK ME Q+EQLEI YP+ R VAKFN+PLAHMIIA
Sbjct: 414 GSDILAEAIPKLAAENCQIVVLGTGKKAMENQIEQLEIQYPDNVRAVAKFNVPLAHMIIA 473
Query: 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536
GAD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VD
Sbjct: 474 GADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVD 533
Query: 537 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGI 596
P DV V TV+RALATYGTQAL EM++N MAQD SWKGP++ WE+ LL+L VAGSEPGI
Sbjct: 534 PSDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKMLLSLGVAGSEPGI 593
Query: 597 DGEEIAPLAKENVATP 612
+GEEIAPLA+ENVATP
Sbjct: 594 EGEEIAPLARENVATP 609
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906516|gb|ACJ11751.1| granule bound starch synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/616 (73%), Positives = 523/616 (84%), Gaps = 11/616 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS + H + G ++KA+ + + M H+GLRSLN +D LQ++T +
Sbjct: 1 MAT-LTTSHFVS-TCSHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLQMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADHR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 236
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYGEDVVF+AN
Sbjct: 175 -WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIAN 233
Query: 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 296
DWH++L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFI
Sbjct: 234 DWHSALLPCYLKSMYQSRGIYMNAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFI 293
Query: 297 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356
DGYNKPV+GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVN
Sbjct: 294 DGYNKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVN 353
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 416
GMDVQEWNP +DKYI VKYDA+TVM AKPLLKEALQAEVGLP D ++P+IGFIGRLEEQK
Sbjct: 354 GMDVQEWNPASDKYISVKYDATTVMKAKPLLKEALQAEVGLPCDGDVPLIGFIGRLEEQK 413
Query: 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476
GSDILA AIP + EN QI+VLGTGKK MEKQ+EQLEI YP+ R VAKFN+PLAHMIIA
Sbjct: 414 GSDILAEAIPKLVAENCQIVVLGTGKKAMEKQIEQLEIQYPDNVRAVAKFNVPLAHMIIA 473
Query: 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536
GAD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VD
Sbjct: 474 GADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVD 533
Query: 537 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGI 596
P DV V TV+RALATYGTQAL EM++N MAQD SWKGP++ WE+ LL+L VAGSEPGI
Sbjct: 534 PSDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKMLLSLGVAGSEPGI 593
Query: 597 DGEEIAPLAKENVATP 612
+GEE+APLAKENVA P
Sbjct: 594 EGEEVAPLAKENVAPP 609
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 612 | ||||||
| TAIR|locus:2037950 | 610 | GBSS1 "granule bound starch sy | 0.991 | 0.995 | 0.671 | 2e-223 | |
| UNIPROTKB|Q42968 | 609 | WAXY "Granule-bound starch syn | 0.916 | 0.921 | 0.649 | 1.6e-198 | |
| TAIR|locus:2102102 | 792 | SS2 "starch synthase 2" [Arabi | 0.781 | 0.603 | 0.398 | 2.3e-87 | |
| TAIR|locus:2169749 | 652 | SS1 "starch synthase 1" [Arabi | 0.785 | 0.737 | 0.382 | 1.2e-83 | |
| TIGR_CMR|BA_5120 | 476 | BA_5120 "glycogen synthase" [B | 0.557 | 0.716 | 0.375 | 3.8e-58 | |
| TIGR_CMR|GSU_1023 | 501 | GSU_1023 "glycogen synthase" [ | 0.549 | 0.670 | 0.364 | 1.2e-51 | |
| TIGR_CMR|GSU_3257 | 484 | GSU_3257 "glycogen synthase" [ | 0.544 | 0.688 | 0.371 | 1.5e-51 | |
| UNIPROTKB|Q9KRB6 | 484 | glgA "Glycogen synthase" [Vibr | 0.593 | 0.75 | 0.340 | 1.5e-51 | |
| TIGR_CMR|VC_1726 | 484 | VC_1726 "glycogen synthase" [V | 0.593 | 0.75 | 0.340 | 1.5e-51 | |
| UNIPROTKB|P0A6U8 | 477 | glgA [Escherichia coli K-12 (t | 0.622 | 0.798 | 0.326 | 2e-47 |
| TAIR|locus:2037950 GBSS1 "granule bound starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2157 (764.4 bits), Expect = 2.0e-223, P = 2.0e-223
Identities = 413/615 (67%), Positives = 491/615 (79%)
Query: 1 MATAVAASSFVSRS--YGHEVASGLNSKAS-QMKFRCMKHSGLRSLNIIDDLQVKTMASK 57
MAT A+S+FVSR+ + + AS + A +K + + H GLRS N++D+LQ ++ A K
Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQA-K 59
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXX 117
+++ + R+ G IVC G++++F+G EV PWSKT
Sbjct: 60 PVSAKSSKRSSKVKTAGK---IVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAAR 116
Query: 118 XHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVV 177
HRVMTI PRYDQYKDAWDT VV+++KVGDK+E VRFFHC+KRGVDRVFVDHP FLAKVV
Sbjct: 117 GHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVV 176
Query: 178 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 237
GKT SKIYGP TG DY DNQLRFSLLCQAALEAP++LNLNS+KYFSGPYGEDVVFVAND
Sbjct: 177 -GKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVAND 235
Query: 238 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 297
WHT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+D
Sbjct: 236 WHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMD 295
Query: 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 357
GY KPV+GRKINWMKA ILE+ VLTVSP+YAQEL+SG D+GVEL +R + GI+NG
Sbjct: 296 GYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIING 355
Query: 358 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 417
MDVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKG
Sbjct: 356 MDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKG 415
Query: 418 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477
SDIL AI F+ NVQ+++LGTGKK ME Q+ +LE +P KA GVAKFN+PLAHMI AG
Sbjct: 416 SDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAG 475
Query: 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537
ADFI++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP
Sbjct: 476 ADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDP 535
Query: 538 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 597
DV A + V RA+A YGT A+ EM+KN M QD SWKGPA+ WE+ LL+L VAGSE G +
Sbjct: 536 DDVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTE 595
Query: 598 GEEIAPLAKENVATP 612
GEEIAPLAKENVATP
Sbjct: 596 GEEIAPLAKENVATP 610
|
|
| UNIPROTKB|Q42968 WAXY "Granule-bound starch synthase 1, chloroplastic/amyloplastic" [Oryza glaberrima (taxid:4538)] | Back alignment and assigned GO terms |
|---|
Score = 1922 (681.6 bits), Expect = 1.6e-198, P = 1.6e-198
Identities = 367/565 (64%), Positives = 433/565 (76%)
Query: 49 LQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFVGTEVAPWSKTXXXXXXX 107
L V T A +++ + G S+ PS+++ G G+N++FVG E+APWSKT
Sbjct: 48 LSVTTSARATPKQQRSVQRG--SRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVL 105
Query: 108 XXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFV 167
HRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRVF+
Sbjct: 106 GGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFI 165
Query: 168 DHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY 227
DHP FL KV WGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G Y
Sbjct: 166 DHPSFLEKV-WGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTY 224
Query: 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPA 287
GEDVVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL
Sbjct: 225 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSE 284
Query: 288 QFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR 347
+F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R
Sbjct: 285 RFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMR 344
Query: 348 KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 407
TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+I
Sbjct: 345 LTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIA 404
Query: 408 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467
FIGRLEEQKG D++AAAIP ++E+VQI++LGTGKK EK L+ +E YP K R V KFN
Sbjct: 405 FIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFN 464
Query: 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 527
PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF MG
Sbjct: 465 APLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGR 524
Query: 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587
SV+C+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL L
Sbjct: 525 LSVNCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGL 584
Query: 588 EVAGSEPGIDGEEIAPLAKENVATP 612
VAGS PGI+G+EIAPLAKENVA P
Sbjct: 585 GVAGSAPGIEGDEIAPLAKENVAAP 609
|
|
| TAIR|locus:2102102 SS2 "starch synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 203/509 (39%), Positives = 281/509 (55%)
Query: 85 LNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELK 144
+N++ V E AP+SKT HRVM + PRY +Y +A D V K
Sbjct: 301 MNVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKRYK 360
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLL 204
V + +V +FH GVD VF+D P F + IYG G D R L
Sbjct: 361 VAGQDMEVMYFHAFIDGVDFVFIDSPEFR------HLSNNIYG---GNRL-DILKRMVLF 410
Query: 205 CQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 264
C+AA+E P + Y G ++ F+ANDWHT+L+P YLK Y+ G+ K + V
Sbjct: 411 CKAAVEVPWYVPCGGVCYGDG----NLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVL 466
Query: 265 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324
IHNIA+QGR +DF ++LP+ + SF D PV G N AG+ +D VLTV
Sbjct: 467 VIHNIAHQGRGPVDDFSYVDLPSHYLDSFKLYD----PVGGEHFNIFAAGLKAADRVLTV 522
Query: 325 SPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDAS 378
S Y+ E+ + E G L NII + K GIVNG+D QEWNP D Y+ Y
Sbjct: 523 SHGYSWEVKTLEG-GWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLE 581
Query: 379 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL 438
+ KP K ALQ E+GLPV ++P+IGFIGRL+ QKG D++A A+P + ++VQ+++L
Sbjct: 582 NLHIGKPQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVML 641
Query: 439 GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAM 498
GTG+ +E+ L Q+E Y +KARG F++ AH I AGAD +L+PSRFEPCGL QL+AM
Sbjct: 642 GTGRPDLEEVLRQMEHQYRDKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAM 701
Query: 499 RYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-- 556
YGT+P+V + GGL DTV++ F + D + + + L TY
Sbjct: 702 NYGTIPVVHAVGGLRDTVQQ-FDPYSETGLGW---TFDSAEAGKLIHALGNCLLTYREYK 757
Query: 557 QALAEMMKNGMAQDLSWKGPAKKWEETLL 585
++ + + GM QDLSW A+K+EE L+
Sbjct: 758 ESWEGLQRRGMTQDLSWDNAAEKYEEVLV 786
|
|
| TAIR|locus:2169749 SS1 "starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 196/513 (38%), Positives = 288/513 (56%)
Query: 86 NILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRY------DQ-YKDAWDTD 138
N++FV +E AP+SKT HRVM I+PRY D+ Y A D
Sbjct: 143 NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 202
Query: 139 VVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQ 198
+ + + ++V F+H ++ GVD VFVDH + YG G + DNQ
Sbjct: 203 IRVTVNCFGGSQEVSFYHEYRDGVDWVFVDHKSY-------HRPGNPYGDSKGA-FGDNQ 254
Query: 199 LRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYK 258
RF+LLC AA EAP +L L F+ YGE +F+ NDWH L+P L Y+P G+YK
Sbjct: 255 FRFTLLCHAACEAPLVLPLGG---FT--YGEKSLFLVNDWHAGLVPILLAAKYRPYGVYK 309
Query: 259 SAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI-DGYNKPVR---GRKINWMKAG 314
A+ + IHN+A+QG + L LP+++ + ++ + + G +N +K
Sbjct: 310 DARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGA 369
Query: 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIG 372
I+ SD ++TVS YA E+ + E G L +++ RK+ I GI NG++V EWNP TD++I
Sbjct: 370 IVTSDRIITVSQGYAWEITTVEG-GYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIP 428
Query: 373 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 432
Y A V + K K ALQ E+GLP+ P+IGFIGRL+ QKG D++ A P + ++
Sbjct: 429 FHYSADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDD 487
Query: 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGL 492
+Q ++LG+G E + +E Y +K RG FN+P++H I AG D +L+PSRFEPCGL
Sbjct: 488 IQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGL 547
Query: 493 IQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV-DPVDVAAVSTTVRRAL 551
QL+AMRYGT+P+V TGGL DTVE F + G V P+ ++ + +R A
Sbjct: 548 NQLYAMRYGTIPVVHGTGGLRDTVEN-FNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAA 606
Query: 552 ATYGT--QALAEMMKNGMAQDLSWKGPAKKWEE 582
ATY Q+ +M+ GM ++ SW+ A ++E+
Sbjct: 607 ATYREYKQSWEGLMRRGMTRNYSWENAAVQYEQ 639
|
|
| TIGR_CMR|BA_5120 BA_5120 "glycogen synthase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 560 (202.2 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
Identities = 136/362 (37%), Positives = 204/362 (56%)
Query: 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFK 290
V ++DWHT+++ L+ Y+ +Y+ K V+ IHN+ +QG F E + LL L ++
Sbjct: 128 VLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFPPEVMYDLLELGDEYF 187
Query: 291 SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG 350
S + ++ Y +N+MK GI+ SD + VSP Y +E + E G +LD ++RK
Sbjct: 188 HS-EQLEFYGN------VNFMKGGIIASDQITAVSPTYKEE-IQYEFFGEKLDGLLRKYN 239
Query: 351 IK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 408
K GIVNG+D +NP TD YI +YDA ++ + K K ALQ GLP + P+I
Sbjct: 240 DKLSGIVNGIDTSVYNPETDSYITAQYDADSLYE-KNENKRALQRYFGLPEKEDTPIISM 298
Query: 409 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 468
+ RL +QKG D++ ++E+VQ I+LG+G E+ E + YPEK + FN
Sbjct: 299 VTRLTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNE 358
Query: 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMG 526
LAH + AG+D L+PS FEPCGL QL A+ YGT+PIV TGGL DTV+ + TG G
Sbjct: 359 ELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNG 418
Query: 527 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLL 585
+ A D + TV RA+ Y +++ E ++K M +D SW+ A +++
Sbjct: 419 FSFTNFNAHDMLH------TVLRAIEFYHDKSVWEQLVKQAMTEDYSWEKSALAYKKLYK 472
Query: 586 NL 587
+L
Sbjct: 473 SL 474
|
|
| TIGR_CMR|GSU_1023 GSU_1023 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 130/357 (36%), Positives = 198/357 (55%)
Query: 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS 291
VF A+DWHT+ +P +L T+Y+ + A V +HN+ +QG F +L + +
Sbjct: 139 VFHAHDWHTAAVPVFLNTLYRDDPLVGGAASVLTVHNMQHQGNFYPGAMEVLGIGWEH-- 196
Query: 292 SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KT 349
F F+ G K + N +K G+ + ++ TVS YA+E+ + E G LD ++R
Sbjct: 197 -FTFL-GLEKD---NQTNLLKGGLYHATVLNTVSEGYAREMQTPE-YGWGLDGVVRARSA 250
Query: 350 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFI 409
+ GI+NG+D +EWNP TD +I Y S + K L K +Q GLP ++P+ G +
Sbjct: 251 DLVGILNGVDYEEWNPETDPHIVANYSRSD-LSGKKLCKRDVQRFFGLPERDDVPLFGLV 309
Query: 410 GRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 469
GRL +QKG DILA AI + +VQ+++LG G+ + YPEK +N
Sbjct: 310 GRLVKQKGIDILAEAIHRILALDVQVVMLGAGEPWSHFYFGDVRNEYPEKFGLYIGYNNG 369
Query: 470 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE----EGFTGFQM 525
L+H I AG+DF ++PS FEPCGL Q++++RYGT+PIV +TGGL D+VE + TG
Sbjct: 370 LSHRIEAGSDFFVMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFDEQNLTGNGF 429
Query: 526 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 582
+S D +A+ V T RR A+A ++ N MA+ +W+ A ++EE
Sbjct: 430 KFWSHDADALFDTVGWTVHTWYRRK------DAMAALIGNAMAKRFTWEDSAARYEE 480
|
|
| TIGR_CMR|GSU_3257 GSU_3257 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 138/371 (37%), Positives = 199/371 (53%)
Query: 230 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF 289
DV+ +DW T+LIP L+ + VF IHN+AYQG F LP+
Sbjct: 132 DVIH-CHDWQTALIPIILRLEAADDPFFARTATVFTIHNLAYQGLFPAPAIAETGLPSAL 190
Query: 290 KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT 349
++ ++++ Y + +N MK IL +D++ TVS Y +E+++ +G L+ ++ +
Sbjct: 191 FTT-EWLEYYGQ------LNLMKGAILTADLITTVSETYRREIMT-PTQGCGLEGVLARR 242
Query: 350 G--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 407
G + GIVNG+D EWNP DK I Y A + K K LQ E+G+P ++P+IG
Sbjct: 243 GDDLFGIVNGIDTDEWNPAADKRIFRNYSARALA-GKAADKLELQRELGMPAAPSVPLIG 301
Query: 408 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA--- 464
+ RL EQKG D++ +P + +Q ++LGTG LE+L + A ++
Sbjct: 302 MVSRLAEQKGIDLVLELLPRLAESELQFVLLGTGNACY---LERLNSFRSKGAANISINL 358
Query: 465 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------E 517
FN PLA I AG+D L+PSRFEPCGL QL AMRYGTVP+V TGGL DTV
Sbjct: 359 GFNDPLAPKIYAGSDLFLMPSRFEPCGLSQLIAMRYGTVPVVRHTGGLRDTVVDVTRHPR 418
Query: 518 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGP 576
EG TGF F+ D A + RALA Y ++ +M+ GM +D+SW
Sbjct: 419 EG-TGFTFEDFTAD----------ACWEAIERALAGYRDRESWRRIMRRGMHRDVSWHNA 467
Query: 577 AKKWEETLLNL 587
A ++E TL +
Sbjct: 468 AGRYE-TLYRM 477
|
|
| UNIPROTKB|Q9KRB6 glgA "Glycogen synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 134/393 (34%), Positives = 208/393 (52%)
Query: 194 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKP 253
Y DN RF A L+ L + P D++ ANDWHT L+P LKT Y+
Sbjct: 106 YADNGERFGFFSAACLDVLPKLGIQ-------P---DIIH-ANDWHTGLVPFLLKTRYRY 154
Query: 254 KGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 313
++ K V +HN ++G F++ ++ P S +F+ Y ++ ++A
Sbjct: 155 DSFFEQVKSVLTVHNAIFKGIFSYHQLEVI--PELNLSGMEFLQ-YGHD----HVSMLRA 207
Query: 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIG 372
GI +D V VSP+YA EL++ +D+ +R+ + GIVNG D EWNP TD Y+
Sbjct: 208 GIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLP 267
Query: 373 VKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 430
Y + ++ K L K ALQ E+ LPV ++P+ G + RL QKG L + F++
Sbjct: 268 ATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLR 326
Query: 431 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPC 490
NVQ++++GTG+ + +L ++ + K V ++ LAH + AG+DF L+PS FE C
Sbjct: 327 NNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEAC 386
Query: 491 GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550
GL Q+++M YGT+PIV GGL DTV + + F + + P A+ T++RA
Sbjct: 387 GLNQIYSMAYGTLPIVREVGGLKDTVND-YDKFPERATGFGYQEPTP---EALLITMQRA 442
Query: 551 LATYGTQALAEMMK---NGMAQDLSWKGPAKKW 580
L Y Q EM+K M Q+ SW+ A+++
Sbjct: 443 LLFY-LQQPEEMLKVQQRAMQQNFSWEESAQEY 474
|
|
| TIGR_CMR|VC_1726 VC_1726 "glycogen synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 134/393 (34%), Positives = 208/393 (52%)
Query: 194 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKP 253
Y DN RF A L+ L + P D++ ANDWHT L+P LKT Y+
Sbjct: 106 YADNGERFGFFSAACLDVLPKLGIQ-------P---DIIH-ANDWHTGLVPFLLKTRYRY 154
Query: 254 KGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 313
++ K V +HN ++G F++ ++ P S +F+ Y ++ ++A
Sbjct: 155 DSFFEQVKSVLTVHNAIFKGIFSYHQLEVI--PELNLSGMEFLQ-YGHD----HVSMLRA 207
Query: 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIG 372
GI +D V VSP+YA EL++ +D+ +R+ + GIVNG D EWNP TD Y+
Sbjct: 208 GIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLP 267
Query: 373 VKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 430
Y + ++ K L K ALQ E+ LPV ++P+ G + RL QKG L + F++
Sbjct: 268 ATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLR 326
Query: 431 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPC 490
NVQ++++GTG+ + +L ++ + K V ++ LAH + AG+DF L+PS FE C
Sbjct: 327 NNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEAC 386
Query: 491 GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550
GL Q+++M YGT+PIV GGL DTV + + F + + P A+ T++RA
Sbjct: 387 GLNQIYSMAYGTLPIVREVGGLKDTVND-YDKFPERATGFGYQEPTP---EALLITMQRA 442
Query: 551 LATYGTQALAEMMK---NGMAQDLSWKGPAKKW 580
L Y Q EM+K M Q+ SW+ A+++
Sbjct: 443 LLFY-LQQPEEMLKVQQRAMQQNFSWEESAQEY 474
|
|
| UNIPROTKB|P0A6U8 glgA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 133/407 (32%), Positives = 205/407 (50%)
Query: 189 RTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSG--PYGEDVVFVANDWHTSLIPCY 246
R G Y D L F+ A +L + SG P+ V A+DWH L P Y
Sbjct: 90 RPGSPYHDTNL-FAYTDNVLRFA--LLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAY 146
Query: 247 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306
L +P AK VF +HN+AYQG F + LP F F+ I G G+
Sbjct: 147 LAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLPWSF---FN-IHGLE--FNGQ 194
Query: 307 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEW 363
I+++KAG+ +D + VSP YA+E+ + G+E L R+ + G++NG+D + W
Sbjct: 195 -ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIW 253
Query: 364 NPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAA 423
+P TD + +Y T+ D K K LQ +GL VD +P+ + RL QKG D++
Sbjct: 254 SPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLE 312
Query: 424 AIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483
A+P +++ Q+ +LG G +++ YP + ++ +H I+ GAD IL+
Sbjct: 313 ALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILV 372
Query: 484 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV-DPVDVAA 542
PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + + + V V + + +
Sbjct: 373 PSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD--CSLENLADGVASGFVFEDSNAWS 430
Query: 543 VSTTVRRALATYGTQALAEMM-KNGMAQDLSWKGPAKKWEETLLNLE 588
+ +RRA + +L + + MA D SW+ AK + E L+
Sbjct: 431 LLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8LL05 | SSG1B_HORVU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7071 | 0.9052 | 0.9805 | N/A | no |
| Q42857 | SSG1_IPOBA | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7159 | 0.9869 | 0.9934 | N/A | no |
| P09842 | SSG1_HORVU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6621 | 0.9460 | 0.9601 | N/A | no |
| Q43784 | SSG1_MANES | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7260 | 0.9852 | 0.9917 | N/A | no |
| P04713 | SSG1_MAIZE | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6736 | 0.9313 | 0.9421 | N/A | no |
| O82627 | SSG1_ANTMA | 2, ., 4, ., 1, ., 2, 1 | 0.7219 | 0.9885 | 0.9950 | N/A | no |
| Q42968 | SSG1_ORYGL | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6772 | 0.9232 | 0.9277 | N/A | no |
| Q43092 | SSG1_PEA | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7264 | 0.9150 | 0.9286 | N/A | no |
| A2Y8X2 | SSG1_ORYSI | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6790 | 0.9232 | 0.9277 | N/A | no |
| Q00775 | SSG1_SOLTU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7182 | 0.9885 | 0.9967 | N/A | no |
| Q43134 | SSG1_SORBI | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6861 | 0.9199 | 0.9259 | N/A | no |
| Q9MAQ0 | SSG1_ARATH | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6926 | 0.9918 | 0.9950 | yes | no |
| P27736 | SSG1_WHEAT | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6325 | 0.9493 | 0.9447 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.4.1.21 | 0.979 |
| 4th Layer | 2.4.1.246 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.4.1 | 0.983 |
| 4th Layer | 2.4.1.242 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 612 | |||
| cd03791 | 476 | cd03791, GT1_Glycogen_synthase_DULL1_like, This fa | 0.0 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 0.0 | |
| PRK00654 | 466 | PRK00654, glgA, glycogen synthase; Provisional | 1e-154 | |
| COG0297 | 487 | COG0297, GlgA, Glycogen synthase [Carbohydrate tra | 1e-125 | |
| PRK14099 | 485 | PRK14099, PRK14099, glycogen synthase; Provisional | 7e-95 | |
| pfam08323 | 234 | pfam08323, Glyco_transf_5, Starch synthase catalyt | 8e-82 | |
| PRK14098 | 489 | PRK14098, PRK14098, glycogen synthase; Provisional | 1e-75 | |
| PLN02939 | 977 | PLN02939, PLN02939, transferase, transferring glyc | 5e-65 | |
| PLN02316 | 1036 | PLN02316, PLN02316, synthase/transferase | 7e-58 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 3e-25 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-14 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 2e-14 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 7e-14 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 9e-13 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 1e-11 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-11 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 2e-11 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 8e-10 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 2e-09 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 7e-09 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 2e-08 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 2e-08 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 7e-08 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 8e-08 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 2e-07 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 2e-07 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 1e-06 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 2e-06 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 3e-06 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 2e-05 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 3e-05 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 3e-05 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 2e-04 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 4e-04 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 7e-04 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 9e-04 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 0.001 | |
| cd03796 | 398 | cd03796, GT1_PIG-A_like, This family is most close | 0.001 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 0.003 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 0.004 |
| >gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 551 bits (1422), Expect = 0.0
Identities = 204/510 (40%), Positives = 285/510 (55%), Gaps = 51/510 (10%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT----DVVI 141
+LFV +EVAP++KTGGLGDV+G LP ALA GH V I P+Y + D +
Sbjct: 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLF 60
Query: 142 ELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRF 201
+ VG + E V F GV F+D+P + + +Y +G DY+DN RF
Sbjct: 61 GVPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRP-------GLYDD-SGYDYEDNAERF 112
Query: 202 SLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 261
+L +AALE R L + + +DWHT L+P LK Y +K+ K
Sbjct: 113 ALFSRAALELLRRLG-----------WKPDIIHCHDWHTGLVPALLKEKYADPF-FKNIK 160
Query: 262 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321
VF IHN+AYQG F E L LP + D ++ Y + +N++KAGI+ +D V
Sbjct: 161 TVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQ------VNFLKAGIVYADAV 214
Query: 322 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379
TVSP YA+E+++ E G LD ++ R + GI+NG+D WNP TD ++ Y A
Sbjct: 215 TTVSPTYAREILTPEF-GEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSA-D 272
Query: 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLG 439
++ K K ALQ E+GLPVD + P+ GF+GRL EQKG D+L A+P ++ Q+++LG
Sbjct: 273 DLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILG 332
Query: 440 TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 499
+G E+ L +L YP + + ++ LAH+I AGADF L+PSRFEPCGL Q++AMR
Sbjct: 333 SGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMR 392
Query: 500 YGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553
YGTVPIV +TGGL DTV + TGF F + + A+ +RRALA
Sbjct: 393 YGTVPIVRATGGLADTVIDYNEDTGEGTGF---VF-------EGYNADALLAALRRALAL 442
Query: 554 YGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 582
Y A ++ +N MAQD SW AK++ E
Sbjct: 443 YRDPEAWRKLQRNAMAQDFSWDRSAKEYLE 472
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 539 bits (1391), Expect = 0.0
Identities = 208/517 (40%), Positives = 283/517 (54%), Gaps = 58/517 (11%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW----DTDVV 140
+ +LFV E+AP++KTGGL DV+G LP ALAA GH V + P Y +D +
Sbjct: 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVEL 60
Query: 141 IELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLR 200
++L VG + V+ F GV F+D+P IYG DY DN R
Sbjct: 61 VDLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLF------DRPGGIYGD----DYPDNAER 110
Query: 201 FSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSA 260
F+ +AA E L + DVV A+DWHT+L+P LK +Y+P
Sbjct: 111 FAFFSRAAAELLSGLG----------WQPDVV-HAHDWHTALVPALLKAVYRPN----PI 155
Query: 261 KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320
K VF IHN+AYQG F +DF L LP ++ + Y + +N++K GI+ +D
Sbjct: 156 KTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL-EFYGR------VNFLKGGIVYADR 208
Query: 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDAS 378
V TVSP YA+E+++ E G LD +++ K GI+NG+D + WNP TD Y+ Y A
Sbjct: 209 VTTVSPTYAREILTPE-FGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSAD 267
Query: 379 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL 438
+ K KEALQ E+GLPVD ++P+ G I RL +QKG D+L AA+P ++ Q++VL
Sbjct: 268 D-LAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL 326
Query: 439 GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAM 498
GTG +E+ L +L YP R + ++ LAH+I AGADFIL+PSRFEPCGL QL+AM
Sbjct: 327 GTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAM 386
Query: 499 RYGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552
RYGTVPIV TGGL DTV +G TGF + D A+ + RAL
Sbjct: 387 RYGTVPIVRRTGGLADTVVDGDPEAESGTGFL----------FEEYDPGALLAALSRALR 436
Query: 553 TYGT--QALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587
Y + KN M+QD SW AK++ E +L
Sbjct: 437 LYRQDPSLWEALQKNAMSQDFSWDKSAKQYVELYRSL 473
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 451 bits (1164), Expect = e-154
Identities = 196/510 (38%), Positives = 257/510 (50%), Gaps = 64/510 (12%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDTDVVIEL 143
+ ILFV +E AP KTGGLGDV+G LP ALAA GH V + P Y ++ D VV L
Sbjct: 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL 60
Query: 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSL 203
+ V F H GV +D P + +G Y DN RF+
Sbjct: 61 DLFT----VLFGHLEGDGVPVYLIDAPHL-------------FDRPSGYGYPDNGERFAF 103
Query: 204 LCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVV 263
AA E L+ P D+V A+DWHT LIP LK Y Y K V
Sbjct: 104 FSWAAAEF--AEGLDPR-----P---DIVH-AHDWHTGLIPALLKEKYWR--GYPDIKTV 150
Query: 264 FCIHNIAYQGRFAFEDFGLLNLPAQ-FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322
F IHN+AYQG F E G L LPA+ F G +I+++KAG+ +D V
Sbjct: 151 FTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYG--------QISFLKAGLYYADRVT 202
Query: 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTV 380
TVSP YA+E+ + E G L+ ++R K GI+NG+D WNP TD + Y A
Sbjct: 203 TVSPTYAREITTPEF-GYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADD- 260
Query: 381 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 440
++ K K ALQ GLP D + P+ + RL EQKG D++ A+P +++ Q+++LGT
Sbjct: 261 LEGKAENKRALQERFGLPDD-DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGT 319
Query: 441 GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY 500
G +E+ L YP K ++ LAH I AGAD L+PSRFEPCGL QL+A+RY
Sbjct: 320 GDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY 379
Query: 501 GTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553
GT+PIV TGGL DTV E TGF F D + + +RRAL
Sbjct: 380 GTLPIVRRTGGLADTVIDYNPEDGEA-TGF---VF-------DDFNAEDLLRALRRALEL 428
Query: 554 YGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 582
Y L + + MAQD SW A+++ E
Sbjct: 429 YRQPPLWRALQRQAMAQDFSWDKSAEEYLE 458
|
Length = 466 |
| >gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 378 bits (973), Expect = e-125
Identities = 187/516 (36%), Positives = 254/516 (49%), Gaps = 63/516 (12%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW--DTDVVIEL 143
ILFV +E+ P+ KTGGL DV+G LP ALA G V + P Y + + W VV +
Sbjct: 2 KILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKF 61
Query: 144 ---KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPR--TGEDYQDNQ 198
K G + + GVD +D+P + T Y DN
Sbjct: 62 GVLKGGRAQLFIVKEYGKDGGVDLYLIDNPAL-------------FKRPDSTLYGYYDNA 108
Query: 199 LRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYK 258
RF+ AA E P D+V A+DW T L+P YLK + + Y
Sbjct: 109 ERFAFFSLAAAEL-----APLGLISWLP---DIVH-AHDWQTGLLPAYLK--QRYRSGYI 157
Query: 259 SAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILES 318
VF IHN+AYQG F + L LP + +SF Y + I+++K G+ +
Sbjct: 158 -IPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLE-FYGQ------ISFLKGGLYYA 209
Query: 319 DMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYD 376
D V TVSP YA E+ + + G L+ ++ K GI+NG+D WNP TD YI Y
Sbjct: 210 DAVTTVSPTYAGEIYT-PEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYS 268
Query: 377 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII 436
A + AK K ALQ +GL VD P+ GF+ RL QKG D+L AI +++ Q++
Sbjct: 269 AEV-LPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLV 327
Query: 437 VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLH 496
+LGTG +E+ L L +P + V ++ PLAH+I AGAD IL+PSRFEPCGL QL+
Sbjct: 328 LLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLY 387
Query: 497 AMRYGTVPIVASTGGLVDTV--------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548
AMRYGT+PIV TGGL DTV + TGF + ++ +R
Sbjct: 388 AMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFL----------FLQTNPDHLANALR 437
Query: 549 RALATYGTQALA--EMMKNGMAQDLSWKGPAKKWEE 582
RAL Y L ++ N M D SW AK++ E
Sbjct: 438 RALVLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVE 473
|
Length = 487 |
| >gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 299 bits (767), Expect = 7e-95
Identities = 181/521 (34%), Positives = 256/521 (49%), Gaps = 73/521 (14%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
L +L V +E+ P KTGGL DV G LP AL A+G V T+ P Y V+ ++
Sbjct: 4 LRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGY--------PAVLAGIE 55
Query: 145 VGDKIEKVR-FFHCHKR-------GVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQD 196
+++ F R G+D +D P + Y G+D+ D
Sbjct: 56 DAEQVHSFPDLFGGPARLLAARAGGLDLFVLDAPHLYDR------PGNPYVGPDGKDWPD 109
Query: 197 NQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM 256
N RF+ L +AA + L + D+V A+DW L P YL +P
Sbjct: 110 NAQRFAALARAAAAIGQGL--------VPGFVPDIVH-AHDWQAGLAPAYLHYSGRPA-- 158
Query: 257 YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG---YNKPVRGRKINWMKA 313
VF IHN+A+QG+F E G L LP S+F +DG Y I ++KA
Sbjct: 159 ---PGTVFTIHNLAFQGQFPRELLGALGLPP---SAFS-LDGVEYYGG------IGYLKA 205
Query: 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYI 371
G+ +D + TVSP YA E + G + G+ LD ++R+ + GI+NG+D WNP TD+ I
Sbjct: 206 GLQLADRITTVSPTYALE-IQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELI 264
Query: 372 GVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE 431
YD T + A+ K ALQA GL D + ++G I RL QKG D+L A+P + E
Sbjct: 265 AATYDVET-LAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE 323
Query: 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCG 491
Q+ +LG+G +E + YP + V ++ LAH+I AGAD +L+PSRFEPCG
Sbjct: 324 GAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADALLVPSRFEPCG 383
Query: 492 LIQLHAMRYGTVPIVASTGGLVDTV----EEGF-----TGFQMGSFSVDCEAVDPVDVAA 542
L QL A+RYG VP+VA GGL DTV E TG Q PV A
Sbjct: 384 LTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS----------PVTADA 433
Query: 543 VSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 582
++ +R+ A + + +NGM D+SW+ PA+ +
Sbjct: 434 LAAALRKTAALFADPVAWRRLQRNGMTTDVSWRNPAQHYAA 474
|
Length = 485 |
| >gnl|CDD|219794 pfam08323, Glyco_transf_5, Starch synthase catalytic domain | Back alignment and domain information |
|---|
Score = 256 bits (656), Expect = 8e-82
Identities = 101/262 (38%), Positives = 136/262 (51%), Gaps = 28/262 (10%)
Query: 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVG 146
ILFV +E AP++KTGGL DV+G LP ALA GH V I PRY + + ++
Sbjct: 1 ILFVASECAPFAKTGGLADVVGALPKALAKLGHDVRVIMPRYGFIPEERKQLEEVI-ELY 59
Query: 147 DKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQ 206
V GVD F+D+P + + IYG G DY+DN RF+ +
Sbjct: 60 VLFGYVGVARLELDGVDVYFLDNPEYFDR-------PGIYGD-AGRDYEDNAERFAFFSR 111
Query: 207 AALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCI 266
AALE R L + D++ +DWHT L+P YLK Y +K+ K VF I
Sbjct: 112 AALELLRKLG----------WKPDII-HCHDWHTGLVPAYLKEAYADDPFFKNIKTVFTI 160
Query: 267 HNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 326
HN+AYQG F + LL LP IDG +IN++KAGI+ +D V TVSP
Sbjct: 161 HNLAYQGVFPADLLDLLGLPW----EDFSIDGLEFY---GQINFLKAGIVYADAVTTVSP 213
Query: 327 HYAQELVSGEDKGVELDNIIRK 348
YA+E+++ E G LD ++RK
Sbjct: 214 TYAEEILTPEF-GEGLDGLLRK 234
|
Length = 234 |
| >gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 248 bits (636), Expect = 1e-75
Identities = 113/359 (31%), Positives = 192/359 (53%), Gaps = 27/359 (7%)
Query: 236 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 295
+DW+ L+P LKT+Y +K K V IHN+ QG F+ F L LP + S
Sbjct: 148 HDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH- 205
Query: 296 IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKG 353
G ++N + G+ +D++ T SP YA+E+ ++ LD ++ RK + G
Sbjct: 206 -------REGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHG 258
Query: 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 413
I+NG+D ++WNP TDK I +Y +D K K+AL EVGLP D P++G I +
Sbjct: 259 ILNGIDTRQWNPSTDKLIKKRYSIER-LDGKLENKKALLEEVGLPFDEETPLVGVIINFD 317
Query: 414 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473
+ +G+++LA ++ ++ ++Q+++ G+G K EK+ + +PE+ +F H+
Sbjct: 318 DFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHL 377
Query: 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFS 529
IAG D +L+P + E CG++Q+ AM YGT+P+ + GG+V+T+EE +GF ++
Sbjct: 378 AIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYT 437
Query: 530 VDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 587
+ A+ + ALA Y + E++ M +D SWK A+++ + L
Sbjct: 438 PE----------ALVAKLGEALALYHDEERWEELVLEAMERDFSWKNSAEEYAQLYREL 486
|
Length = 489 |
| >gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 230 bits (587), Expect = 5e-65
Identities = 166/528 (31%), Positives = 259/528 (49%), Gaps = 75/528 (14%)
Query: 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD-----QYKDAWDTD 138
GL+I+ + E+AP +K GGL DV+ GL AL GH V + P+YD Q ++ D
Sbjct: 481 GLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLD 540
Query: 139 VVIELKVGDKIEKVRFFHCHKRGVDRVFVD--HPWFLAKVVWGKTQSKIYGPRTGEDYQD 196
VV+E + K + + G+ F++ HP +K W +++ YG D
Sbjct: 541 VVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHP---SKFFW---RAQYYGE------HD 588
Query: 197 NQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI-PCYLKTMYKPKG 255
+ RFS +AALE L S K D++ +DW T+ + P Y +Y PKG
Sbjct: 589 DFKRFSYFSRAALE----LLYQSGKKP------DIIH-CHDWQTAFVAPLYWD-LYAPKG 636
Query: 256 MYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR-----KINW 310
+ SA++ F HN YQG D L + ++P R + +IN
Sbjct: 637 -FNSARICFTCHNFEYQGTAPASDLASCGLD---------VHQLDRPDRMQDNAHGRINV 686
Query: 311 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKY 370
+K I+ S++V TVSP YAQE+ S +G++ GI+NG+D WNP TD++
Sbjct: 687 VKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRF 746
Query: 371 IGVKYDASTVMDAKPLLKEALQAEVGLP-VDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 429
+ V+Y+A+ + K K AL+ ++GL D + P++G I RL QKG ++ AI
Sbjct: 747 LKVQYNAND-LQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTA 805
Query: 430 KENVQIIVLGTGKKP-MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPSR 486
+ Q ++LG+ P ++++ E + + R + K++ L+H I A +D +IPS
Sbjct: 806 ELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSM 865
Query: 487 FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP--------- 537
FEPCGL Q+ AMRYG+VPIV TGGL D+V F D E +
Sbjct: 866 FEPCGLTQMIAMRYGSVPIVRKTGGLNDSV-----------FDFDDETIPVELRNGFTFL 914
Query: 538 -VDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 582
D +++ + RA Y + ++++ M D SW A ++EE
Sbjct: 915 TPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEE 962
|
Length = 977 |
| >gnl|CDD|215180 PLN02316, PLN02316, synthase/transferase | Back alignment and domain information |
|---|
Score = 209 bits (534), Expect = 7e-58
Identities = 157/529 (29%), Positives = 235/529 (44%), Gaps = 118/529 (22%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
++I+ + E+AP +K GGLGDV+ L A+ H V I P+YD + D+ +
Sbjct: 588 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRS 647
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVD--HPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFS 202
+++ + G+ F++ + F A V YG R ++ RF
Sbjct: 648 YSWGGTEIKVWFGKVEGLSVYFLEPQNGMFWAGCV--------YGCR------NDGERFG 693
Query: 203 LLCQAALE-------APRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKG 255
C AALE P I++ +DW ++ + K Y G
Sbjct: 694 FFCHAALEFLLQSGFHPDIIH------------------CHDWSSAPVAWLFKDHYAHYG 735
Query: 256 MYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI 315
+ K A+VVF IHN+ +FG N + +
Sbjct: 736 LSK-ARVVFTIHNL---------EFG--------------------------ANHIGKAM 759
Query: 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG-IKGIVNGMDVQEWNPLTDKYIGVK 374
+D TVSP Y++E VSG I GI+NG+D W+P D +I V
Sbjct: 760 AYADKATTVSPTYSRE-VSGNSA------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVP 812
Query: 375 YDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQ 434
Y + V++ K KEALQ +GL ++P++G I RL QKG ++ AI ++ N Q
Sbjct: 813 YTSENVVEGKRAAKEALQQRLGLK-QADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQ 871
Query: 435 IIVLGTGKKPMEKQ-----LEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEP 489
+++LG+ P + QL + ++AR ++ PL+H+I AGADFIL+PS FEP
Sbjct: 872 VVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEP 931
Query: 490 CGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD-------CEAVDP----- 537
CGL QL AMRYG++P+V TGGL DTV F VD + ++P
Sbjct: 932 CGLTQLTAMRYGSIPVVRKTGGLFDTV-----------FDVDHDKERAQAQGLEPNGFSF 980
Query: 538 --VDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 582
D A V + RA++ + G + K M QD SW PA + E
Sbjct: 981 DGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYME 1029
|
Length = 1036 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 3e-25
Identities = 84/358 (23%), Positives = 134/358 (37%), Gaps = 96/358 (26%)
Query: 230 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF 289
DVV A+DW L + +V +H +
Sbjct: 87 DVV-HAHDWLALLAAALAARLLG-------IPLVLTVHGLE------------------- 119
Query: 290 KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT 349
F + + + +D ++ VS +EL E GV + I
Sbjct: 120 ---FGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELR--ELGGVPPEKITV-- 172
Query: 350 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFI 409
I NG+D + + P A + +G+P D PVI F+
Sbjct: 173 ----IPNGVDTERFRPAPR---------------------AARRRLGIPEDE--PVILFV 205
Query: 410 GRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF- 466
GRL +KG D+L A+ KE +V+++++G G P+ ++LE L G+
Sbjct: 206 GRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDG--PLREELEALA-----AELGLGDRV 258
Query: 467 ----NIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEG 519
+P + A AD ++PS +E GL+ L AM G P+VAS GG+ + VE+G
Sbjct: 259 TFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDVGGIPEVVEDG 317
Query: 520 FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM-KNG---MAQDLSW 573
TG V P D A++ + R L L + + +A+ SW
Sbjct: 318 ETGL----------LVPPGDPEALAEAILRLLD---DPELRRRLGEAARERVAERFSW 362
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 75.0 bits (183), Expect = 2e-14
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 394 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQ 451
+GL + V+ ++GRL+ +KG D+L A K +++++++G G + E+ +
Sbjct: 190 RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKL 249
Query: 452 LEILYPEKARGVAKFNIPLAH----MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 507
+ L E KF + ++A AD ++PS E GL+ L AM GT I +
Sbjct: 250 AKKLGLED---NVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIAS 306
Query: 508 STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-QALAEMMKNG 566
GG+ + VE+G TG V P DV ++ + + L + L E +
Sbjct: 307 DVGGIPEVVEDGETGL----------LVPPGDVEELADALEQLLEDPELREELGEAARER 356
Query: 567 MAQDLSWKGPAKKWEETLLNL 587
+ ++ SW+ A++ E L
Sbjct: 357 VEEEFSWERIAEQLLELYEEL 377
|
Length = 381 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 2e-14
Identities = 70/297 (23%), Positives = 118/297 (39%), Gaps = 63/297 (21%)
Query: 297 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356
D P + ++ + +D V+ VS A EL + I + I N
Sbjct: 128 DVNLLPRKRLLRALLRRALRRADAVIAVSEALADELKA---------LGIDPEKVTVIPN 178
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 416
G+D + ++P A ++GLP D+ VI F+GRL +K
Sbjct: 179 GVDTERFSPA---------------------DRAEARKLGLPEDK--KVILFVGRLVPRK 215
Query: 417 GSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-------- 466
G D L A+ +K+ +V ++++G G P+ + LE L G+
Sbjct: 216 GIDYLIEALARLLKKRPDVHLVIVGDG--PLREALEAL-----AAELGLEDRVTFLGAVP 268
Query: 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQM 525
+ + A AD ++PS E GL+ L AM G P+VA+ GG+ + + +G G
Sbjct: 269 HEEVP-AYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGGIPEIITDGENGLL- 325
Query: 526 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 582
V P D A++ + R LA + + + SW+ A++ E
Sbjct: 326 ---------VPPGDPEALAEAILRLLADPWLRLGRAARRRVAER-FSWENVAERLLE 372
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 7e-14
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 463
P+I F+GRL +KG D+L A +++ + ++ G EK+L++L + + +
Sbjct: 3 PIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLGLEDNVI 62
Query: 464 AKFNIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT 521
+P +I AD ++PSR+E GL+ L AM G I GG + V++G T
Sbjct: 63 FVGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIATDVGGPAEIVKDGET 122
Query: 522 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552
G VDP D A++ + + L
Sbjct: 123 GL----------LVDPGDAEALAEAIEKLLK 143
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 69.9 bits (172), Expect = 9e-13
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQ---IIVLGTGKKP 444
EA +A + D+ P I +GRL+ +KG D L A + + +IV G
Sbjct: 207 AEARRARLLRDPDK--PRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDI 264
Query: 445 MEKQLEQLEILYPEKARGVA-KFNIPLAH------MIIAGADFILIPSRFEPCGLIQLHA 497
+ E+L L + GV + + P + AD + P+ +EP GL L A
Sbjct: 265 LAMDEEELREL--ARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEA 322
Query: 498 MRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552
M G P+VA+ GG D V +G TG VDP D A++ +RR L
Sbjct: 323 MACGL-PVVATAVGGPRDIVVDGVTGL----------LVDPRDPEALAAALRRLLT 367
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 1e-11
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 22/202 (10%)
Query: 339 GVELDNIIRKTGIK------GIVNGM--DVQEWNP-LTDKYIGVKYDASTVMDAKPLLKE 389
G +L + KT I+ + GM D+ ++ P L + + V Y+ + KP
Sbjct: 130 GYKLSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGN 189
Query: 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQL 449
+ G +DR+ P I F+GR+ QKG L A+ H+I ++VQ+ VL G +
Sbjct: 190 VVLDRYG--IDRSRPYILFVGRITRQKGVPHLLDAV-HYIPKDVQV-VLCAGAPDTPEVA 245
Query: 450 EQLEILYPEKAR---GVAKFN----IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 502
E++ R G+ N +++ A+ + PS +EP G++ L AM GT
Sbjct: 246 EEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT 305
Query: 503 VPIVAS-TGGLVDTVEEGFTGF 523
P+VAS TGG+ + V +G TGF
Sbjct: 306 -PVVASATGGIPEVVVDGETGF 326
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 1e-11
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 408 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF- 466
F+GRL +KG D L A + + ++ G P + LE+L R V
Sbjct: 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDR-VIFLG 167
Query: 467 ---NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 523
L +++A AD ++PS E GL+ L AM G I GG + VE+G TG
Sbjct: 168 GLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGL 227
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 2e-11
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 39/219 (17%)
Query: 387 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLG--TGK 442
+ L+ ++ + D V+ + GR+ KG +L A N++++V+G T
Sbjct: 179 PQPNLRQQLNISPDET--VLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTAS 236
Query: 443 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG-------------ADFILIPSRF-E 488
EK Q ++L K G I+ G AD +++PS+ E
Sbjct: 237 SKGEKAAYQKKVLEAAKRIG--------DRCIMLGGQPPEKMHNYYPLADLVVVPSQVEE 288
Query: 489 PCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547
++ + AM G P++AST GG+ + V EG TG+ + +P+ ++ + +
Sbjct: 289 AFCMVAVEAMAAGK-PVLASTKGGITEFVLEGITGYHLA---------EPMTSDSIISDI 338
Query: 548 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586
R LA +AE K+ + SW+G +++EE + N
Sbjct: 339 NRTLADPELTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377
|
Length = 380 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 8e-10
Identities = 47/196 (23%), Positives = 78/196 (39%), Gaps = 40/196 (20%)
Query: 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGK 442
++ + + L + + PVI +GRL QKG D L A KE + ++++LG G
Sbjct: 171 EEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDG- 229
Query: 443 KPMEKQLEQLEILYPEKARGVAKFNI------------PLAHMIIAGADFILIPSRFEPC 490
P+ ++LE L + + P ++ AD ++ SR+E
Sbjct: 230 -PLREELEAL----------AKELGLADRVHFLGFQSNPYPYL--KAADLFVLSSRYEGF 276
Query: 491 GLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549
+ L AM GT P+VA+ G + +E+G G V D AA++
Sbjct: 277 PNVLLEAMALGT-PVVATDCPGPREILEDGENGL----------LVPVGDEAALAAAALA 325
Query: 550 ALATYGTQALAEMMKN 565
L L E +
Sbjct: 326 LLDLLLDPELRERLAA 341
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 2e-09
Identities = 53/191 (27%), Positives = 75/191 (39%), Gaps = 34/191 (17%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHF-IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462
PV+ ++GRL +K + L A + V+++++G G P +LE YP
Sbjct: 198 PVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDG--PARARLEAR---YPN---- 248
Query: 463 VAKFNIPLAH----MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVE 517
F L A AD + PSR E GL+ L AM G +P+VA GG D V
Sbjct: 249 -VHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASG-LPVVAPDAGGPADIVT 306
Query: 518 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPA 577
+G G V+P D A + + LA MA +
Sbjct: 307 DGENGL----------LVEPGDAEAFAAALAALLAD-PELRRR------MAARARAEAER 349
Query: 578 KKWEETLLNLE 588
+ WE L NL
Sbjct: 350 RSWEAFLDNLL 360
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 7e-09
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 398 PVDRNIPVIGFIGRLEEQKGSDIL--AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL 455
P+ + PV F+ RL + KG D L AA I NV+++++G G + + ++E L
Sbjct: 183 PIPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKL 242
Query: 456 YPEKARGVAKF-----NIPLAHMIIAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVAS 508
G +F ++P ++A AD ++PS E P L++ AM G P++A+
Sbjct: 243 ---GLEGRVEFLGFRDDVP---ELLAAADVFVLPSYREGLPRVLLE--AMAMG-RPVIAT 293
Query: 509 -TGGLVDTVEEGFTGF 523
G + V +G GF
Sbjct: 294 DVPGCREAVIDGVNGF 309
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 57/199 (28%)
Query: 408 FIGRLEEQKGSDIL--AAAIPHFIKENVQIIVLGTGKKPMEKQLEQL--------EILYP 457
+GRL QKG D+L A A + ++ ++G G P + LE L ++
Sbjct: 183 AVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDG--PEREALEALIKELGLEDRVILL 240
Query: 458 EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS--TGGLVDT 515
+ + ++ A A ++ SRFE ++ L AM +G +P+++ G +
Sbjct: 241 GFTKNIEEY--------YAKASIFVLTSRFEGFPMVLLEAMAFG-LPVISFDCPTGPSEI 291
Query: 516 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--------- 566
+E+G G V DV ALA +AL +M++
Sbjct: 292 IEDGVNGL----------LVPNGDVE--------ALA----EALLRLMEDEELRKRMGAN 329
Query: 567 ---MAQDLSWKGPAKKWEE 582
A+ S + K+WEE
Sbjct: 330 ARESAERFSIENIIKQWEE 348
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE----NVQIIVLGTGKKPMEK 447
+A +GLP+D V+ F+GR++ K D+L A+ + N+++IV+G
Sbjct: 210 RARLGLPLDT--KVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLA 267
Query: 448 QLEQLEILYPEKARGVAK---FNIP-----LAHMIIAGADFILIPSRFEPCGLIQLHAMR 499
+ L L E G+A F P L H+ A AD + +PS E GL+ + A
Sbjct: 268 TPDALIELAAE--LGIADRVRFLPPRPPEELVHVYRA-ADVVAVPSYNESFGLVAMEAQA 324
Query: 500 YGTVPIVASTGGLVDTVEEGFTGF 523
GT + A GGL V +G TG
Sbjct: 325 CGTPVVAARVGGLPVAVADGETGL 348
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 7e-08
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 464
GFIG+L KG D+L A + +++++++G G + E+ +LE + G
Sbjct: 193 RFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESY-ELEGDPRVEFLGAY 251
Query: 465 KFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 523
A D +++PS + E L+ A+ G I + GG+ + V +G G
Sbjct: 252 PQEEIDDFY--AEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGL 309
Query: 524 QMGSFSVDCEAVDPVDVAAV 543
F D D+AA
Sbjct: 310 ---LFPPG----DAEDLAAA 322
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 8e-08
Identities = 44/176 (25%), Positives = 67/176 (38%), Gaps = 39/176 (22%)
Query: 382 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL---AAAIPHFIKENVQIIVL 438
D + E P F+GRL KG D+L AAA+P + ++++
Sbjct: 170 DPARYPRPDALEEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP-----DAPLVIV 224
Query: 439 GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI--------IAGADFILIPS--RFE 488
G G P+E +LE L G+ + + +A D + PS R E
Sbjct: 225 GEG--PLEAELEALAAAL-----GLLD-RVRFLGRLDDEEKAALLAACDVFVFPSVERSE 276
Query: 489 PCGLIQLHAMRYGTVPIVAS--TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542
G++ L AM +G P++++ G G TG V P D AA
Sbjct: 277 AFGIVLLEAMAFG-KPVISTEIGTGGSYVNLHGVTGL----------VVPPGDPAA 321
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 31/207 (14%)
Query: 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA---AAIPHFIKENVQIIVLGTGKKP 444
+ P+ + +I F+GRL +KG D+L A + + +++ G +
Sbjct: 188 LPSRGRRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAE-RFPDWHLVIAGPDEGG 246
Query: 445 MEKQLEQLEILYPEKARGVAK---FNIPLAHMIIAG----ADFILIPSRFEPCGLIQLHA 497
+L+Q+ A G+ F L A AD ++PS E G++ A
Sbjct: 247 YRAELKQI-----AAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEA 301
Query: 498 MRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYG 555
+ GT P+V + + +E G C V DV A++ +RRAL
Sbjct: 302 LACGT-PVVTTDKVPWQELIEYG------------CGWVVDDDVDALAAALRRALELPQR 348
Query: 556 TQALAEMMKNGMAQDLSWKGPAKKWEE 582
+A+ E + + + SW A++ E
Sbjct: 349 LKAMGENGRALVEERFSWTAIAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKAR 461
PV+ ++GRL ++K D L A +KE +V+++++G G P ++LE+L +
Sbjct: 203 PVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDG--PEREELEEL-----AREL 255
Query: 462 GVAKF----------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STG 510
G+A +P + AD + S E GL+ L AM G P+VA
Sbjct: 256 GLADRVIFTGFVPREELPDYY---KAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAP 311
Query: 511 GLVDTVEEGFTGF 523
GL D V +G GF
Sbjct: 312 GLPDLVADGENGF 324
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 1e-06
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 45/205 (21%)
Query: 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 413
I NG+D + P K ++ L GLP D+ I + G +G +
Sbjct: 164 IPNGIDTTIFRPR----------------DKREARKRL----GLPADKKIILFGAVGGTD 203
Query: 414 EQKGSDILAAA---IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN--I 468
+KG D L A + K++++++V G + L P + N
Sbjct: 204 PRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPPDL-------PFPVHYLGSLNDDE 256
Query: 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGS 527
LA +I + AD ++PS E + A+ GT P+VA GG+ D V+ G TG+
Sbjct: 257 SLA-LIYSAADVFVVPSLQENFPNTAIEALACGT-PVVAFDVGGIPDIVDHGVTGY---- 310
Query: 528 FSVDCEAVDPVDVAAVSTTVRRALA 552
P D ++ + LA
Sbjct: 311 ------LAKPGDPEDLAEGIEWLLA 329
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 48/173 (27%), Positives = 70/173 (40%), Gaps = 31/173 (17%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQL--EILYPEK 459
P I F+GR E+KG +L A + V+++++G G P+ LE L + +
Sbjct: 189 PRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDG--PLLAALEALARALGLGGR 246
Query: 460 AR--GVAKFNIPLAHMIIAGADFILIPSRFEP------CGLIQLHAMRYGTVPIVAS-TG 510
G M A L PS P ++ L A G VP+VA+ G
Sbjct: 247 VTFLGAQPHAEVRELM--RRARIFLQPSVTAPSGDAEGLPVVLLEAQASG-VPVVATRHG 303
Query: 511 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 563
G+ + VE+G TG V DVAA++ + R LA L M
Sbjct: 304 GIPEAVEDGETGL----------LVPEGDVAALAAALGRLLA---DPDLRARM 343
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 3e-06
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 33/135 (24%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKAR 461
+I F+GRL+E KG D L A +K+ N +++++G G Y +
Sbjct: 228 KIILFVGRLDEIKGVDYLIEAFKIVLKKDPNCRLVIVGDGD-------------YSRYLQ 274
Query: 462 GVAKFNIPLAHMIIAG-------------ADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508
K + + G AD ++PS E C + + M +G +P++ +
Sbjct: 275 ECKKI---WSKITFTGKLDKEKLYELYQIADVGVLPSFHEQCSYVAIEMMMHG-LPLIGT 330
Query: 509 TG-GLVDTVEEGFTG 522
T GL + +E+G G
Sbjct: 331 TSTGLSEMIEDGLNG 345
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Query: 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKE---NVQIIVLGTGKKPMEKQLEQLEIL-YP 457
I IG G G L +++ +V++ ++G+G + + + + L +
Sbjct: 1 GIVFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGPEELARLAPNVHFLGFV 60
Query: 458 EKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTV 516
E + +A AD L P RF L L A+ G P+VA+ G
Sbjct: 61 EDLAAL-----------LASADVALAPLRFGAGSPLKLLEALAAGL-PVVATDIGAEGLP 108
Query: 517 EEGFTGF 523
E+ G
Sbjct: 109 EDLGWGV 115
|
Length = 134 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 3e-05
Identities = 50/221 (22%), Positives = 81/221 (36%), Gaps = 43/221 (19%)
Query: 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 413
I NG+D + ++P D + L+ E+GLP + +IG + RL
Sbjct: 164 IPNGVDTERFSPDLDA------------------RARLREELGLP--EDTFLIGIVARLH 203
Query: 414 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473
QK L A +K+ +L G P LE L + + +
Sbjct: 204 PQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKE-LGLEDKVILLGERSDV 262
Query: 474 --IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSV 530
++ D ++ S E + L AM G +P+VA+ G + V + TGF
Sbjct: 263 PALLNALDVFVLSSLSEGFPNVLLEAMACG-LPVVATDVGDNAELVGD--TGF------- 312
Query: 531 DCEAVDPVDVAAVSTTVRRALA------TYGTQALAEMMKN 565
V P D A++ + LA G A + +N
Sbjct: 313 ---LVPPGDPEALAEAIEALLADPALRQALGEAARERIEEN 350
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 3e-05
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 56/222 (25%)
Query: 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGV 373
I +SD V VS +E EL +I + I+ I N +D +
Sbjct: 141 SIEKSDGVTAVSESLKEETY-------ELFDIDKP--IEVIPNFVDTDRY---------- 181
Query: 374 KYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI---GF--IGRLEEQKGSDILAAAIPHF 428
+ AL+ ++G P D + +I F + R+E D++ +
Sbjct: 182 ----------RRKNDPALKRKLGAPEDEKV-LIHISNFRPVKRVE-----DVIE--VFAR 223
Query: 429 IKENV--QIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKF--NIPLAHMIIAGADFIL 482
+++ V +++++G G + P E+ + +L + F +++ +D L
Sbjct: 224 VQQEVPAKLLLVGDGPERSPAEQLVRELGL------TDRVLFLGKQDDVAELLSISDLFL 277
Query: 483 IPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGF 523
+PS E GL L AM G VP++AS GG+ + VE G TGF
Sbjct: 278 LPSEKESFGLAALEAMACG-VPVIASNAGGIPEVVEHGVTGF 318
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 36/210 (17%)
Query: 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIV 437
V D E+L+A GL PV+ G L KG ++L A+P + + +V+++V
Sbjct: 165 VPDPPAEPPESLKALGGLD---GRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLV 221
Query: 438 LGTGKKPMEKQLEQLEILYPEKAR-GVAK---FN---IPLA--HMIIAGADFILIPSRFE 488
G + Y R G+A F +P + + AD +++P R
Sbjct: 222 AG---ETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSA 278
Query: 489 PC---GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545
G++ A+ +G P++++ G + V +G TG V P D AA++
Sbjct: 279 DQTQSGVLAY-AIGFG-KPVISTPVGHAEEVLDGGTGL----------LVPPGDPAALAE 326
Query: 546 TVRRALATYGTQALAEMMKNG--MAQDLSW 573
+RR LA + + A+ +SW
Sbjct: 327 AIRRLLADP--ELAQALRARAREYARAMSW 354
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 523
+++ AD L+PS E GL L AM G + ++ GG+ + V+ G TGF
Sbjct: 267 LLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGF 316
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 7e-04
Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 43/197 (21%)
Query: 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQI---IVLGTGKKPM 445
E P + ++ +GRL E+KG D L A+ + IV G G P+
Sbjct: 166 ERFPPRPPPPPGEPLRIL-SVGRLVEKKGLDYLLEALALLKDRGIDFRLDIV-GDG--PL 221
Query: 446 EKQLEQLEILYPEKARGVAKFNIPL-----AHMIIA---GAD-FILIPSRFEPCGLIQ-- 494
+LE L G+ + L + AD F+L PS G +
Sbjct: 222 RDELEAL-----IAELGLED-RVTLLGAKSQEEVRELLRAADLFVL-PSVTAADGDREGL 274
Query: 495 ----LHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549
+ AM G +P++++ G+ + VE+G TG V P D A++ + R
Sbjct: 275 PVVLMEAMAMG-LPVISTDVSGIPELVEDGETGL----------LVPPGDPEALADAIER 323
Query: 550 ALATYGTQALAEMMKNG 566
L + EM + G
Sbjct: 324 LLDD--PELRREMGEAG 338
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 9e-04
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 26/133 (19%)
Query: 405 VIGFIGRLEEQKGSDILAAAIPHF------IKENVQIIVLGTGKKPMEKQLEQLEILYPE 458
V+G +GRL+ K L A E ++++++G G P EQ+
Sbjct: 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDG--PARGACEQMV----- 248
Query: 459 KARGVA--------KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-T 509
+A G+A + ++P ++ D ++PS E L AM G +P++A+
Sbjct: 249 RAAGLAHLVWLPGERDDVP---ALMQALDLFVLPSLAEGISNTILEAMASG-LPVIATAV 304
Query: 510 GGLVDTVEEGFTG 522
GG + V+ G TG
Sbjct: 305 GGNPELVQHGVTG 317
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.001
Identities = 47/266 (17%), Positives = 89/266 (33%), Gaps = 74/266 (27%)
Query: 258 KSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILE 317
+ VV IH++ F + ++ R ++ +
Sbjct: 102 RGVPVVVTIHDLIP---------------------LRFPEYFSPGFRRYFRRLLRRALRR 140
Query: 318 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 377
+D ++TVS ++L+ +Y+GV D
Sbjct: 141 ADAIITVSEATKRDLL-----------------------------------RYLGVPPDK 165
Query: 378 STVM------DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE 431
V+ +P EA + R P ++G +E +K + L A +
Sbjct: 166 IVVIPLGVDPRFRPPPAEAEVLRALYLLPR--PYFLYVGTIEPRKNLERLLEAFARLPAK 223
Query: 432 --NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--NIPLAHM--IIAGADFILIPS 485
+ +++++G E+ L +L L +F + + + GA + PS
Sbjct: 224 GPDPKLVIVGKRGWLNEELLARLREL---GLGDRVRFLGYVSDEELAALYRGARAFVFPS 280
Query: 486 RFEPCGLIQLHAMRYGTVPIVASTGG 511
+E GL L AM GT P++AS
Sbjct: 281 LYEGFGLPVLEAMACGT-PVIASNIS 305
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.001
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQ 451
D + I I RL +KG D+L IP K NV+ I+ G G P LE+
Sbjct: 190 DNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDG--PKRILLEE 241
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.003
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD--ILAAAIPHFIKE---NVQIIVLGTGK 442
+ L P+ + PVI GRL KG + I A A +K+ +V ++++G +
Sbjct: 170 ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR---LKKDDPDVHLLIVGDAQ 226
Query: 443 KPMEKQLEQLEILYPEKARGVAKF-----NIPLAHMIIAGADFILIPS-RFEPCGLIQLH 496
E LE++ + F ++P A+ + AD ++ S E G +
Sbjct: 227 GRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYAL---ADIVVSASTEPEAFGRTAVE 283
Query: 497 AMRYGTVPIVASTGGLVDTVEEGFTGF 523
A G I + GG +TV G TG
Sbjct: 284 AQAMGRPVIASDHGGARETVRPGETGL 310
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 37/176 (21%)
Query: 404 PVIGFIGRLEEQKGSDILA---AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKA 460
P+I ++GRL +K D L +P ++ +G G P ++LE++
Sbjct: 264 PLIVYVGRLGAEKNLDFLKRVMERLP-----GARLAFVGDG--PYREELEKM-------- 308
Query: 461 RGVAKFNIPLAHMI--------IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGG 511
A M+ A D ++PS E G + L AM G VP+VA+ GG
Sbjct: 309 --FAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGG 365
Query: 512 LVDTV---EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 564
+ D + +EG TGF VD + V+ ++ +R G A E+ K
Sbjct: 366 IPDIIPPDQEGKTGFLYTPGDVD-DCVEKLETLLADPELR---ERMGAAAREEVEK 417
|
Length = 465 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 612 | |||
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 100.0 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.97 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.96 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.96 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.96 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.96 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.96 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.95 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.94 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.94 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.92 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.92 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.91 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.9 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.89 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.89 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.88 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.88 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.87 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.87 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.87 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.85 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.84 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.79 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.78 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.78 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.78 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.76 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.76 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.72 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.71 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.63 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.58 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.57 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.49 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.48 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.47 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.43 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.37 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 99.33 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.31 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.31 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.21 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 99.19 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.14 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.14 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 99.05 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 99.04 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.02 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 98.96 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.88 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 98.82 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.79 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.67 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.66 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.58 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.55 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.48 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.44 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.43 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.42 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.42 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.32 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.19 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.12 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.12 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.05 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 98.03 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.88 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.82 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 97.79 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.52 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 97.27 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.14 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 97.08 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.07 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 97.07 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.04 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.01 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 96.81 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 96.79 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 96.72 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 96.5 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 95.97 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 95.88 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.13 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 95.08 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 93.24 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 93.16 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 93.11 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 93.0 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 92.34 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 91.81 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 91.39 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 91.24 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 91.02 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 90.66 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 90.09 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 89.16 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 89.13 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 88.97 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 88.76 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 88.67 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 88.5 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 88.47 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 88.37 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 88.31 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 88.05 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 87.36 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 87.04 | |
| PLN02208 | 442 | glycosyltransferase family protein | 86.96 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 86.52 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 86.26 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 86.22 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 85.24 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 84.94 | |
| PLN02764 | 453 | glycosyltransferase family protein | 84.88 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 84.43 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 84.3 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 83.94 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 83.17 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 81.8 | |
| PLN00414 | 446 | glycosyltransferase family protein | 81.77 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 81.75 |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-69 Score=601.03 Aligned_cols=467 Identities=33% Similarity=0.566 Sum_probs=393.5
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCc-----cEEEEEEeCCeeeEEEEEE
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-----DVVIELKVGDKIEKVRFFH 156 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 156 (612)
.++|||+||++|+.|+.++||+++++++|+++|+++||+|.||+|.|+.....+.. .......+++.....++++
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~ 558 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEE
Confidence 46899999999999999999999999999999999999999999999876532111 1122223333344578888
Q ss_pred eeecCceEEEEeC--h-hhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEE
Q 007224 157 CHKRGVDRVFVDH--P-WFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVF 233 (612)
Q Consensus 157 ~~~~gv~~~~l~~--~-~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvi 233 (612)
...+||+++|+++ | .||.+ ..+|+ +.|+..||.+||+++++++..+++ +|| ||
T Consensus 559 ~~~~GV~vyfId~~~~~~fF~R-------~~iYg------~~Dn~~RF~~FsrAaLe~~~~~~~----------~PD-II 614 (977)
T PLN02939 559 GTVEGLPVYFIEPQHPSKFFWR-------AQYYG------EHDDFKRFSYFSRAALELLYQSGK----------KPD-II 614 (977)
T ss_pred EEECCeeEEEEecCCchhccCC-------CCCCC------CccHHHHHHHHHHHHHHHHHhcCC----------CCC-EE
Confidence 8889999999984 3 37766 67886 689999999999999999988754 699 99
Q ss_pred EecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHH
Q 007224 234 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 313 (612)
Q Consensus 234 h~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 313 (612)
|||||++++++.+++..+...+ +.++|+||||||+.|||.|+...+..+|++....... +++... +...+++++.
T Consensus 615 H~HDW~TaLV~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~---d~le~~-~~~~iN~LK~ 689 (977)
T PLN02939 615 HCHDWQTAFVAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRP---DRMQDN-AHGRINVVKG 689 (977)
T ss_pred EECCccHHHHHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccCh---hhhhhc-cCCchHHHHH
Confidence 9999999998555555454444 4789999999999999999888888888886654211 121111 2256899999
Q ss_pred HHHhcCEEEecCHHHHHHHHccccCCccchhhhh--ccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHH
Q 007224 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 314 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l 391 (612)
++..||.|+|||+.+++++.. .+|..++..++ ..++.+|+||+|++.|+|.++++|+.+|++.++ .+|..++..+
T Consensus 690 GIv~AD~VtTVSptYA~EI~t--e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl-~GK~~nK~aL 766 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRS--EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDL-QGKAANKAAL 766 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHH--HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhh-hhhhhhhHHH
Confidence 999999999999999999985 35555555443 468999999999999999999999999999997 6999999999
Q ss_pred HHHhCCCCC-CCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc-hhHHHHHHHHHHHCC--CceEEEeccC
Q 007224 392 QAEVGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYP--EKARGVAKFN 467 (612)
Q Consensus 392 ~~~~gl~~~-~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~--~~i~~~~~~~ 467 (612)
++++|++.+ ++.++|+||||+.++||++.+++|+..+..++++|+|+|+|+ ..+++.++++..+++ +++.+.+.++
T Consensus 767 RkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~d 846 (977)
T PLN02939 767 RKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYD 846 (977)
T ss_pred HHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccC
Confidence 999999864 567999999999999999999999998877789999999996 456788888888875 4688888888
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec---------CceEEEecccccccCCCCCC
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---------GFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---------g~~G~l~~~~~~~~~~v~~~ 538 (612)
..+.+.+|++||++|+||++||||++++|||+||+|||++++||+.|+|.+ +.|||+| ++.
T Consensus 847 e~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf----------~~~ 916 (977)
T PLN02939 847 EALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF----------LTP 916 (977)
T ss_pred HHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe----------cCC
Confidence 888889999999999999999999999999999999999999999999975 5799988 999
Q ss_pred CHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 539 DVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 539 d~~~la~~l~~ll~~~--~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
|+++++++|.+++..+ +++.+.+|+++++.++|||+.++++|+++|++++..
T Consensus 917 D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 917 DEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999998743 367889999999999999999999999999998753
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-67 Score=577.09 Aligned_cols=466 Identities=38% Similarity=0.617 Sum_probs=388.4
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccE-EEEEEeCCeeeEEEEEEeeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDV-VIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|++|||+||++|+.|+.|+||++++++.|+++|+++||+|.|+.|.|++..+.+.... ...+.+.. ...+++++...+
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLF-GGPARLLAARAG 79 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeC-CceEEEEEEEeC
Confidence 5789999999999999999999999999999999999999999999998864433221 12222110 114677888889
Q ss_pred CceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCcc
Q 007224 161 GVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 240 (612)
Q Consensus 161 gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~ 240 (612)
||+++|++++.||.+ ...+|++..|.+|.||..||.+||++++++++.+.. .++|| |||+|||++
T Consensus 80 ~v~~~~~~~~~~f~r------~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~--------~~~pD-IiH~Hdw~~ 144 (485)
T PRK14099 80 GLDLFVLDAPHLYDR------PGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVP--------GFVPD-IVHAHDWQA 144 (485)
T ss_pred CceEEEEeChHhhCC------CCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhcc--------CCCCC-EEEECCcHH
Confidence 999999999999987 124898877889999999999999999998876421 24799 999999999
Q ss_pred chHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCE
Q 007224 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 320 (612)
++++.+++...+ .++|+|+|+||+.+|+.|+...+..++++...... ++.. +...+++++.++..||.
T Consensus 145 ~l~~~~l~~~~~-----~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~i~~ad~ 212 (485)
T PRK14099 145 GLAPAYLHYSGR-----PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSL----DGVE---YYGGIGYLKAGLQLADR 212 (485)
T ss_pred HHHHHHHHhCCC-----CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCc----hhhh---hCCCccHHHHHHHhcCe
Confidence 999998874221 46899999999999999987777777777654321 1110 12345789999999999
Q ss_pred EEecCHHHHHHHHccccCCccchhhh--hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCC
Q 007224 321 VLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~ 398 (612)
|+|+|+.+++++.. ..+|..++..+ +..++.+|+||+|++.|+|.+++++..+|+..++ +.+..++..+++++|++
T Consensus 213 vitVS~~~a~ei~~-~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~ 290 (485)
T PRK14099 213 ITTVSPTYALEIQG-PEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL-AARAANKAALQARFGLD 290 (485)
T ss_pred eeecChhHHHHHhc-ccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHH-HhHHHhHHHHHHHcCCC
Confidence 99999999999985 22344333332 2358999999999999999999999999999886 67888899999999998
Q ss_pred CCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 399 ~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
.+++.++|+++||+.++||++.+++|++++.+.+++|+|+|+|++.+++.++++..+++.++..+.++..++.+.++++|
T Consensus 291 ~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~a 370 (485)
T PRK14099 291 PDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGA 370 (485)
T ss_pred cccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcC
Confidence 77678999999999999999999999999977789999999998778889999998887767556677666666556789
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---------ceEEEecccccccCCCCCCCHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ 549 (612)
|++|+||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++|+++|.+
T Consensus 371 Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~----------~~~d~~~La~ai~~ 440 (485)
T PRK14099 371 DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF----------SPVTADALAAALRK 440 (485)
T ss_pred CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe----------CCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999875 689987 99999999999998
Q ss_pred H---HHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 550 A---LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 550 l---l~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+ +++ ++.+.+|+++++.++|||+.++++|+++|++++.
T Consensus 441 a~~l~~d--~~~~~~l~~~~~~~~fSw~~~a~~y~~lY~~l~~ 481 (485)
T PRK14099 441 TAALFAD--PVAWRRLQRNGMTTDVSWRNPAQHYAALYRSLVA 481 (485)
T ss_pred HHHHhcC--HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHh
Confidence 4 444 6788999999999999999999999999999874
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-67 Score=574.99 Aligned_cols=467 Identities=29% Similarity=0.579 Sum_probs=392.0
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCccccc-CCc-c----EEEEEEeCCeeeEEEEEEe
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDT-D----VVIELKVGDKIEKVRFFHC 157 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~-~~~-~----~~~~~~~~~~~~~~~~~~~ 157 (612)
+|||+||++|+.|+.|+||++++++.|+++|+++||+|.|+.|.|+...+. +.. . ....+.++......+..+.
T Consensus 5 ~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (489)
T PRK14098 5 NFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVT 84 (489)
T ss_pred CcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEe
Confidence 499999999999999999999999999999999999999999999887653 211 1 1222333332223333333
Q ss_pred eec--CceEEEEeChhhhhhhhcCCCCCcccCCC-CCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEE
Q 007224 158 HKR--GVDRVFVDHPWFLAKVVWGKTQSKIYGPR-TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 234 (612)
Q Consensus 158 ~~~--gv~~~~l~~~~~~~~~~w~~~~~~~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih 234 (612)
..+ |+++++++++.||.+ ..+|++. .|.+|.||..||.+||++++++++.+.+ +|| |||
T Consensus 85 ~~~~~~v~~~~~~~~~~f~r-------~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~----------~pD-iiH 146 (489)
T PRK14098 85 ALPSSKIQTYFLYNEKYFKR-------NGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGW----------KPD-IIH 146 (489)
T ss_pred cccCCCceEEEEeCHHHcCC-------CCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCC----------CCC-EEE
Confidence 333 699999999999988 6799876 6779999999999999999999987654 699 999
Q ss_pred ecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHH
Q 007224 235 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG 314 (612)
Q Consensus 235 ~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 314 (612)
+|||+++++|.+++..++....+.++|+|+|+||+.+||.++...+..+ ++..+...+. ......++++.+
T Consensus 147 ~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~~--------~~~~~~n~lk~~ 217 (489)
T PRK14098 147 CHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH--------REGDEVNMLYTG 217 (489)
T ss_pred ecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhhh--------hcCCcccHHHHH
Confidence 9999999999999987655455568999999999999998876554433 4433221110 012457899999
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhh--ccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~ 392 (612)
+..||.|+|||+.+++++.....+|..++..++ ..++.+|+||+|++.|+|.+++.+..+|+..++ +.|..++..++
T Consensus 218 i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~-~~k~~~k~~l~ 296 (489)
T PRK14098 218 VEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERL-DGKLENKKALL 296 (489)
T ss_pred HHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchh-hhHHHHHHHHH
Confidence 999999999999999999752223333333332 358999999999999999999899999999886 57888899999
Q ss_pred HHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHH
Q 007224 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 472 (612)
Q Consensus 393 ~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~ 472 (612)
+++|++.+++.++|+++||+.++||++.+++|+.++.+++++|+|+|+|+..+++.++++..++++++.+.+.++.++++
T Consensus 297 ~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~ 376 (489)
T PRK14098 297 EEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFH 376 (489)
T ss_pred HHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHH
Confidence 99999988888999999999999999999999999987799999999998778899999999888889888889999999
Q ss_pred HHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec----CceEEEecccccccCCCCCCCHHHHHHHHH
Q 007224 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 473 ~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~----g~~G~l~~~~~~~~~~v~~~d~~~la~~l~ 548 (612)
.+|++||++++||++|+||++++|||+||+|||++++||+.|++.+ +.+|+++ ++.|+++++++|.
T Consensus 377 ~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~----------~~~d~~~la~ai~ 446 (489)
T PRK14098 377 LAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF----------HDYTPEALVAKLG 446 (489)
T ss_pred HHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe----------CCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999874 6799988 9999999999999
Q ss_pred HHHHhh-CHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 549 RALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 549 ~ll~~~-~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
++++.+ +++.+.+++++++.++|||+.++++|+++|++++
T Consensus 447 ~~l~~~~~~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 447 EALALYHDEERWEELVLEAMERDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred HHHHHHcCHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Confidence 987543 2678888999989999999999999999999886
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-63 Score=546.41 Aligned_cols=459 Identities=45% Similarity=0.773 Sum_probs=393.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCc----cEEEEEEeCCeeeEEEEEEeeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT----DVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|||+||++|++|+.++||+++++++|+++|+++||+|+|++|.|+...+.+.. .....+.+++....+++++...+
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 89999999999999999999999999999999999999999999987665432 23445666777778889999999
Q ss_pred CceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCcc
Q 007224 161 GVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 240 (612)
Q Consensus 161 gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~ 240 (612)
|+++++++++.++.+ ...+|++ +|.++..||.+|+++++++++.++. +|| |||+|+|++
T Consensus 81 ~v~~~~i~~~~~~~r------~~~~y~~----~~~d~~~r~~~f~~a~~~~~~~~~~----------~~D-iiH~hdw~~ 139 (473)
T TIGR02095 81 GVPVYFIDNPSLFDR------PGGIYGD----DYPDNAERFAFFSRAAAELLSGLGW----------QPD-VVHAHDWHT 139 (473)
T ss_pred CceEEEEECHHHcCC------CCCCCCC----CCCCHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEECCcHH
Confidence 999999999988765 1247875 7899999999999999999887643 699 999999999
Q ss_pred chHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCE
Q 007224 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 320 (612)
++++.+++..++. .++|+|+|+|+..+++.++...+..++++..+... ..+. ....+++++.++..||.
T Consensus 140 ~~~~~~l~~~~~~----~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~~~~ad~ 208 (473)
T TIGR02095 140 ALVPALLKAVYRP----NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHM----EGLE---FYGRVNFLKGGIVYADR 208 (473)
T ss_pred HHHHHHHHhhccC----CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCc----hhhh---cCCchHHHHHHHHhCCc
Confidence 9999999877521 14899999999999998887666666766443221 1111 11357899999999999
Q ss_pred EEecCHHHHHHHHccccCCccchhhh--hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCC
Q 007224 321 VLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~ 398 (612)
|+++|+.+++++... .+|..++..+ +..++.+|+||+|.+.|+|.+++++..+|+..++ ..+...+..+++++|++
T Consensus 209 v~tVS~~~~~ei~~~-~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~ 286 (473)
T TIGR02095 209 VTTVSPTYAREILTP-EFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDL-AGKAENKEALQEELGLP 286 (473)
T ss_pred CeecCHhHHHHhcCC-cCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccch-hhhhhhHHHHHHHcCCC
Confidence 999999999998752 3444443322 2458999999999999999999999999998875 46777788999999998
Q ss_pred CCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 399 ~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
.+++.++|+|+||+.++||++.+++|++++.+.+++|+|+|+|++.+++.++++..+++.++.+...++.++++.++++|
T Consensus 287 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 366 (473)
T TIGR02095 287 VDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGA 366 (473)
T ss_pred ccCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhC
Confidence 76678999999999999999999999999987789999999998778889999998888888888888999888999999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC------ceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
|++++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.+++.
T Consensus 367 Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 367 DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLF----------EEYDPGALLAALSRALR 436 (473)
T ss_pred CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 899988 99999999999999998
Q ss_pred hh--CHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 007224 553 TY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 553 ~~--~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l 587 (612)
.+ +++.+.+|+++++.++|||+.++++|+++|+++
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 437 LYRQDPSLWEALQKNAMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHhcCHHHHHHHHHHHhccCCCcHHHHHHHHHHHHhC
Confidence 32 267889999999989999999999999999864
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-62 Score=559.57 Aligned_cols=434 Identities=33% Similarity=0.566 Sum_probs=365.0
Q ss_pred ccccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEe
Q 007224 78 MIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHC 157 (612)
Q Consensus 78 ~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (612)
.....++|||+||+.|+.|+.++||+++++.+|+++|+++||+|.|++|.|+...............+......+++++.
T Consensus 581 ~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 660 (1036)
T PLN02316 581 GIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFG 660 (1036)
T ss_pred CCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEE
Confidence 34446679999999999999999999999999999999999999999999986543221111111122222235678888
Q ss_pred eecCceEEEEeCh-hhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEec
Q 007224 158 HKRGVDRVFVDHP-WFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 236 (612)
Q Consensus 158 ~~~gv~~~~l~~~-~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h 236 (612)
..+|+++++++++ .+|.+ ..+|+ |.|+..||.+||++++++++.+.+ +|| |||||
T Consensus 661 ~~~GV~vyfl~~~~~~F~r-------~~~Yg------~~Dd~~RF~~F~~Aale~l~~~~~----------~PD-IIHaH 716 (1036)
T PLN02316 661 KVEGLSVYFLEPQNGMFWA-------GCVYG------CRNDGERFGFFCHAALEFLLQSGF----------HPD-IIHCH 716 (1036)
T ss_pred EECCcEEEEEeccccccCC-------CCCCC------chhHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEEC
Confidence 8899999999976 36655 45675 789999999999999999987654 699 99999
Q ss_pred CCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHH
Q 007224 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 316 (612)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 316 (612)
||++++++.+++..++..+ +.++|+|+|+|++.++. +.++.++.
T Consensus 717 DW~talva~llk~~~~~~~-~~~~p~V~TiHnl~~~~-----------------------------------n~lk~~l~ 760 (1036)
T PLN02316 717 DWSSAPVAWLFKDHYAHYG-LSKARVVFTIHNLEFGA-----------------------------------NHIGKAMA 760 (1036)
T ss_pred CChHHHHHHHHHHhhhhhc-cCCCCEEEEeCCcccch-----------------------------------hHHHHHHH
Confidence 9999999999988765443 36789999999876521 34567889
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhC
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 396 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g 396 (612)
.+|.|+|||+.+++++... ..+.. +..++.+|+||||++.|+|.++++++.+|++.++..+|..++..+|+++|
T Consensus 761 ~AD~ViTVS~tya~EI~~~--~~l~~----~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lG 834 (1036)
T PLN02316 761 YADKATTVSPTYSREVSGN--SAIAP----HLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLG 834 (1036)
T ss_pred HCCEEEeCCHHHHHHHHhc--cCccc----ccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhC
Confidence 9999999999999999852 22221 12389999999999999999999999999999988888899999999999
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc-hhHHHHHHHHHHHC----CCceEEEeccChHHH
Q 007224 397 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILY----PEKARGVAKFNIPLA 471 (612)
Q Consensus 397 l~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~----~~~i~~~~~~~~~~~ 471 (612)
++. ++.|+|+|+|||.++||++.|++|+.++.+.+++|+|+|+|+ ..+++.+++++.++ ++++.+.+.++..+.
T Consensus 835 L~~-~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~la 913 (1036)
T PLN02316 835 LKQ-ADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLS 913 (1036)
T ss_pred CCc-ccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHH
Confidence 983 367899999999999999999999999877789999999985 44677888888754 456777788888888
Q ss_pred HHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC-------------ceEEEecccccccCCCCCC
Q 007224 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-------------FTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 472 ~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g-------------~~G~l~~~~~~~~~~v~~~ 538 (612)
+.+|++||++|+||++||||++++|||+||+|||++++||+.|+|.++ .|||+| ++.
T Consensus 914 h~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf----------~~~ 983 (1036)
T PLN02316 914 HLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF----------DGA 983 (1036)
T ss_pred HHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe----------CCC
Confidence 899999999999999999999999999999999999999999999884 699988 999
Q ss_pred CHHHHHHHHHHHHHhh-C-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 539 DVAAVSTTVRRALATY-G-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 539 d~~~la~~l~~ll~~~-~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
|+++++.+|.+++.++ . +..+.+++++++.++|||+.++++|+++|+++.
T Consensus 984 d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 984 DAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 9999999999999874 2 355688899999999999999999999999875
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-62 Score=536.66 Aligned_cols=453 Identities=42% Similarity=0.692 Sum_probs=377.4
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccC-CccEEEEEEeCCeeeEEEEEE--eeecC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW-DTDVVIELKVGDKIEKVRFFH--CHKRG 161 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~g 161 (612)
|||+||++|++|+.++||+++++.+|+++|+++||+|+|++|.|+...+.. +.....++ ...+++. ...+|
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g 74 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL------DLFTVLFGHLEGDG 74 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEe------eeEEEEEEeEEcCC
Confidence 899999999999999999999999999999999999999999998765432 11111111 1133333 35689
Q ss_pred ceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccc
Q 007224 162 VDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~ 241 (612)
+++++++++.++.+ ..+|+ |.++..||.+||++++++++.++. +|| |||+|+|+++
T Consensus 75 v~v~~v~~~~~~~~-------~~~y~------~~d~~~r~~~f~~~~~~~~~~~~~----------~pD-iiH~h~w~~~ 130 (466)
T PRK00654 75 VPVYLIDAPHLFDR-------PSGYG------YPDNGERFAFFSWAAAEFAEGLDP----------RPD-IVHAHDWHTG 130 (466)
T ss_pred ceEEEEeCHHHcCC-------CCCCC------CcChHHHHHHHHHHHHHHHHhcCC----------CCc-eEEECCcHHH
Confidence 99999999998877 56776 789999999999999999987753 699 9999999999
Q ss_pred hHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEE
Q 007224 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 321 (612)
+++.+++..+ ..+ +.++|+|+|+|++.+++.++...+..++++..... .+... .....++++.++..||.|
T Consensus 131 ~~~~~l~~~~-~~~-~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~ad~v 201 (466)
T PRK00654 131 LIPALLKEKY-WRG-YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFH----LEGLE---FYGQISFLKAGLYYADRV 201 (466)
T ss_pred HHHHHHHHhh-hcc-CCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcC----chhhh---cCCcccHHHHHHHhcCcC
Confidence 9999999765 222 35789999999999999888766666677654422 11110 113468899999999999
Q ss_pred EecCHHHHHHHHccccCCccchhhh--hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 322 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
+++|+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|.+++.+..+|++.++ +.+..+++.+++++|++
T Consensus 202 itvS~~~~~ei~~-~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~- 278 (466)
T PRK00654 202 TTVSPTYAREITT-PEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDL-EGKAENKRALQERFGLP- 278 (466)
T ss_pred eeeCHHHHHHhcc-ccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhh-hchHHHHHHHHHHhCCC-
Confidence 9999999999875 22332222222 2348999999999999999988889999998875 57778889999999998
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 400 ~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
+++.++|+|+||+.++||++.+++|++++.+++++|+|+|+|+..+++.++++..+++.++.....++.++.+.+|++||
T Consensus 279 ~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aD 358 (466)
T PRK00654 279 DDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGAD 358 (466)
T ss_pred CCCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCC
Confidence 33578999999999999999999999999777999999999987788899999999887777777788788888999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC------ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
++|+||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.++++.
T Consensus 359 v~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv----------~~~d~~~la~~i~~~l~~ 428 (466)
T PRK00654 359 MFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVF----------DDFNAEDLLRALRRALEL 428 (466)
T ss_pred EEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 899988 999999999999999874
Q ss_pred hC-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 554 YG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 554 ~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+. ++.+.+|+++++.++|||+.++++|+++|++++.
T Consensus 429 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 429 YRQPPLWRALQRQAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred hcCHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHhh
Confidence 32 5668899999988999999999999999998863
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-59 Score=514.39 Aligned_cols=462 Identities=44% Similarity=0.747 Sum_probs=388.0
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEE----EEEEeCCeeeEEEEEEeeecC
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVV----IELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g 161 (612)
||+||++|++|+.++||+++++.+|+++|+++||+|+|++|.|+...+.+..... ..+..+.....++.++...+|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 6999999999999999999999999999999999999999999987765443322 234455566678888888899
Q ss_pred ceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccc
Q 007224 162 VDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~ 241 (612)
++++++++|.++.+ ..+| +..+.+|.++..+|..|+++++++++.+.. +|| |||+|+|+++
T Consensus 81 v~~~~l~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~----------~pD-viH~hd~~t~ 141 (476)
T cd03791 81 VPVYFLDNPDYFDR-------PGLY-DDSGYDYEDNAERFALFSRAALELLRRLGW----------KPD-IIHCHDWHTG 141 (476)
T ss_pred ceEEEEcChHHcCC-------CCCC-CccCCCCccHHHHHHHHHHHHHHHHHhcCC----------CCc-EEEECchHHH
Confidence 99999999988876 3444 445567999999999999999999988643 699 9999999999
Q ss_pred hHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEE
Q 007224 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 321 (612)
+++.+++..++. ..+.++|+|+|+|++.+++.++...+..++.+... . ...... ......++++.++..||.|
T Consensus 142 ~~~~~l~~~~~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~--~-~~~~~~---~~~~~~~~~~~~~~~ad~v 214 (476)
T cd03791 142 LVPALLKEKYAD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE--L-FHIDGL---EFYGQVNFLKAGIVYADAV 214 (476)
T ss_pred HHHHHHHHhhcc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc--h-hhhccc---ccCCcccHHHHHHHhcCcC
Confidence 999999987643 33468999999999999998776555444433210 0 001111 1224568899999999999
Q ss_pred EecCHHHHHHHHccccCCccchhhh--hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 322 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
+++|+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|..++.+..+|+... ...+...+..+++++|++.
T Consensus 215 ~~vS~~~~~~i~~-~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~-~~~~~~~k~~l~~~~g~~~ 292 (476)
T cd03791 215 TTVSPTYAREILT-PEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADD-LEGKAENKAALQEELGLPV 292 (476)
T ss_pred eecCHhHHHHhCC-CCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccc-cccHHHHHHHHHHHcCCCc
Confidence 9999999999875 22333333333 235899999999999999998888888888544 4688888999999999986
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 400 ~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
+++.++|+|+||+.++||++.++++++++.+.+++|+|+|+|...+++.++++..++++++.....++.++.+.+++.||
T Consensus 293 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 372 (476)
T cd03791 293 DPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGAD 372 (476)
T ss_pred CCCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCC
Confidence 77889999999999999999999999999877799999999987788899999888777788888888888889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCc------eEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~------~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
++++||++|+||++++|||+||+|||++++||+.|+|.++. +|+++ ++.|+++++++|.++++.
T Consensus 373 v~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~----------~~~~~~~l~~~i~~~l~~ 442 (476)
T cd03791 373 FFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF----------EGYNADALLAALRRALAL 442 (476)
T ss_pred EEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe----------CCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 99988 999999999999999976
Q ss_pred hC-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 554 YG-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 554 ~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
+. ++.+.+++++++.+.|||+.++++|+++|+
T Consensus 443 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 443 YRDPEAWRKLQRNAMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred HcCHHHHHHHHHHHhccCCChHHHHHHHHHHHh
Confidence 53 688899999999999999999999999996
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-59 Score=498.69 Aligned_cols=463 Identities=40% Similarity=0.638 Sum_probs=398.4
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCcc--E--EEEEEeCCeeeEEEEEEeeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD--V--VIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|||++++.|+.|..|+||++++++.|+++|++.||+|.|+.|.|+...+.|... . ...+..+.........+..+.
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 899999999999999999999999999999999999999999999777666542 1 223333333333333343334
Q ss_pred C-ceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCc
Q 007224 161 G-VDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH 239 (612)
Q Consensus 161 g-v~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~ 239 (612)
+ ++.++++++.++++ . +..+.+|.|+..||..|++++++.+...... ..|| |||+||||
T Consensus 81 ~~v~~~lid~~~~f~r-------~----~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~--------~~pD-IvH~hDWq 140 (487)
T COG0297 81 GGVDLYLIDNPALFKR-------P----DSTLYGYYDNAERFAFFSLAAAELAPLGLIS--------WLPD-IVHAHDWQ 140 (487)
T ss_pred CCCcEEEecChhhcCc-------c----ccccCCCCcHHHHHHHHHHHHHHHhhhcCCC--------CCCC-EEEeecHH
Confidence 3 99999999988876 1 2334459999999999999999998765410 2699 99999999
Q ss_pred cchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcC
Q 007224 240 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 319 (612)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad 319 (612)
++++|.+++..++. ...+|.|||+||+.|||.|+......+++|..+...+. ...+ ...+++|.++..||
T Consensus 141 t~L~~~~lk~~~~~---~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~-l~~~------~~~~~lK~gi~~ad 210 (487)
T COG0297 141 TGLLPAYLKQRYRS---GYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFG-LEFY------GQISFLKGGLYYAD 210 (487)
T ss_pred HHHHHHHHhhcccc---cccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhce-eeec------Ccchhhhhhheecc
Confidence 99999999986511 25899999999999999999667789999976655211 1111 34689999999999
Q ss_pred EEEecCHHHHHHHHccccCCccchhhhh--ccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCC
Q 007224 320 MVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 320 ~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl 397 (612)
.|.+||+.+++++. ...+|..++..++ ..++++|.||+|...|+|.+++++..+|+..+.. ++..++..+++++||
T Consensus 211 ~vttVSptYa~Ei~-t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~-~k~~nk~~L~~~~gL 288 (487)
T COG0297 211 AVTTVSPTYAGEIY-TPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP-AKAENKVALQERLGL 288 (487)
T ss_pred EEEEECHHHHHhhc-cccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchh-hhHHHHHHHHHHhCC
Confidence 99999999999998 3667776666554 3689999999999999999999999999999986 599999999999999
Q ss_pred CCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007224 398 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 398 ~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ 477 (612)
+.+.+.|++.++||+..|||+|.+++++..+.+..++++++|+|+..++..+..+++.+++++.....++.++.+.++++
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~ag 368 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAG 368 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhc
Confidence 98888999999999999999999999999999988999999999989999999999999998888899999999999999
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec--------CceEEEecccccccCCCCCCCHHHHHHHHHH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--------g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ 549 (612)
||++++||++||||+++++||++|+++|+..+||++|+|.+ ..|||+| .+.++++++.+|.+
T Consensus 369 aD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f----------~~~~~~~l~~al~r 438 (487)
T COG0297 369 ADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF----------LQTNPDHLANALRR 438 (487)
T ss_pred CCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEE----------ecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986 5899998 88899999999999
Q ss_pred HHHhhC-HHH-HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 550 ALATYG-TQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 550 ll~~~~-~~~-~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
++.-+. ++. ++.+..++|..+|||+..+++|.++|+.+..
T Consensus 439 A~~~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~~ 480 (487)
T COG0297 439 ALVLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVELYKPLLS 480 (487)
T ss_pred HHHHhhCCHHHHHHHHHhhcccccCchhHHHHHHHHHHHHhc
Confidence 998765 344 8888899999999999999999999999874
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=363.57 Aligned_cols=470 Identities=19% Similarity=0.251 Sum_probs=366.3
Q ss_pred EEEEecccc-----CccccccHHHHhhhhHHHHHhCCCeEEEEeecCCc-c--------------cccCCc---------
Q 007224 87 ILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-Y--------------KDAWDT--------- 137 (612)
Q Consensus 87 Il~v~~~~~-----P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~-~--------------~~~~~~--------- 137 (612)
|++++.||. |. ..||+|........+++..|...+.++..|.+ | .+.|+.
T Consensus 1 ~ayf~~E~g~~~~~p~-ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLPI-YSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 456666643 42 58999999999999999999999999976552 1 012321
Q ss_pred -----cEEEEEEeCCeeeEEEEEEeeecCceEEEEeChh----hhhhhhcCCCC-CcccCCCCCCCCcchhHHHHHHHHH
Q 007224 138 -----DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPW----FLAKVVWGKTQ-SKIYGPRTGEDYQDNQLRFSLLCQA 207 (612)
Q Consensus 138 -----~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~----~~~~~~w~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~ 207 (612)
.....+.+.++...++.+....+++++++++++. ++.+ .. ..+|++ |...++.++.+|+.+
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R-----~it~~LY~~----D~~~R~~Qe~fl~~a 150 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDR-----WITGRLYGG----DKEMRIAQEIVLGIG 150 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhc-----CccCCCCCC----CHHHHHHHHHHHHHH
Confidence 1246677777778889998888899999999885 5554 22 246763 345666777999999
Q ss_pred HHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCC-----C--CCceEEEEEecCccccc--CCcc
Q 007224 208 ALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAFE 278 (612)
Q Consensus 208 ~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~-----~--~~~~vv~~iH~~~~~~~--~~~~ 278 (612)
.++.++.+++ +|| |||+||||+++++.++.+..-..+. + ...+++||+|++.+||. |+..
T Consensus 151 ~l~~l~~l~~----------~pd-viH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~ 219 (601)
T TIGR02094 151 GVRALRALGI----------DPD-VYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPED 219 (601)
T ss_pred HHHHHHHcCC----------Cce-EEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHH
Confidence 9999988764 699 9999999999999887543211110 0 14789999999999997 8876
Q ss_pred ccc--------ccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhh--hc
Q 007224 279 DFG--------LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RK 348 (612)
Q Consensus 279 ~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~--~~ 348 (612)
.+. .++++.......... .+-.....++++.++..||.|.+||+.+.+.... .++. +...+ +.
T Consensus 220 ~~~~~~~~~~~~~gl~~~~~~~~~~~----~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~--l~~~-l~~~~~~~~ 292 (601)
T TIGR02094 220 LMRKYFGDYAANLGLPREQLLALGRE----NPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRK--MWQF-LYPGYEEEE 292 (601)
T ss_pred HHHHHhhhhhhHhCCCHHHHHhhhhh----ccCccCceeHHHHHHHhCCeeeeecHHHHHHHHH--HHHh-hhhhccccc
Confidence 663 356665543322111 1000135799999999999999999999883331 0110 10111 12
Q ss_pred cCeEEeeCCCccCccCCCCccccccccCcch---------------------hhcchHHHHHHHHH--------------
Q 007224 349 TGIKGIVNGMDVQEWNPLTDKYIGVKYDAST---------------------VMDAKPLLKEALQA-------------- 393 (612)
Q Consensus 349 ~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~---------------------~~~~~~~~k~~l~~-------------- 393 (612)
.++..|.||||...|.|.+++.+..+|+.++ +.+.|..+|.++++
T Consensus 293 ~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g 372 (601)
T TIGR02094 293 VPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRG 372 (601)
T ss_pred CCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 3689999999999999999999999999888 35788999999988
Q ss_pred -------HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCchh------HHHHHHHHHH
Q 007224 394 -------EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEI 454 (612)
Q Consensus 394 -------~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~------~~~~lvivG~g~~~------~~~~l~~l~~ 454 (612)
++|++.+++.+++++++|+.++||++++++++.++.+ .+++||++|++.+. +.+.+.++++
T Consensus 373 ~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~ 452 (601)
T TIGR02094 373 ADAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSK 452 (601)
T ss_pred CcchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHh
Confidence 5788888999999999999999999999999988853 47999999999855 8999999998
Q ss_pred H--CCCceEEEeccChHHHHHHHHhcCEEEe-CCC-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEeccccc
Q 007224 455 L--YPEKARGVAKFNIPLAHMIIAGADFILI-PSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSV 530 (612)
Q Consensus 455 ~--~~~~i~~~~~~~~~~~~~~l~~adi~l~-pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~ 530 (612)
+ +++++.+...|+.++++.++++||++++ ||+ +|+||++.+-||..|.+.+++-.|...|.. ++.|||.||....
T Consensus 453 ~~~~~~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~ 531 (601)
T TIGR02094 453 RPEFRGRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEE 531 (601)
T ss_pred cccCCCCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCcc
Confidence 8 8889999999999999999999999999 999 999999999999999999999999888877 6789999964211
Q ss_pred --ccCCCCCCCHHHHHHHHHHHH-Hhh-C------HHHHHHHHHHHHHh---cCCcHHHHHHHHHHHH
Q 007224 531 --DCEAVDPVDVAAVSTTVRRAL-ATY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEETLL 585 (612)
Q Consensus 531 --~~~~v~~~d~~~la~~l~~ll-~~~-~------~~~~~~~~~~~~~~---~~sw~~~a~~~~~~y~ 585 (612)
+.+..|..|.++|-++|++.+ ..+ + +..+.++.+++|.. .|||++++++|.++|.
T Consensus 532 ~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 532 YDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 223345789999999998877 322 1 34689999999987 7999999999999873
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=372.08 Aligned_cols=444 Identities=18% Similarity=0.160 Sum_probs=289.4
Q ss_pred CCCceEEEEeccccC---------ccccccHHHHhhhhHHHHHhCC--CeEEEEeecCCcccccCCccEEEEEEeCCe-e
Q 007224 82 GVGLNILFVGTEVAP---------WSKTGGLGDVLGGLPPALAANG--HRVMTIAPRYDQYKDAWDTDVVIELKVGDK-I 149 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P---------~~~~GG~~~~~~~La~~L~~~G--h~V~vit~~~~~~~~~~~~~~~~~~~~~~~-~ 149 (612)
.++|.|++|+..-.| ...+||...|+.+|+++|+++| |+|+++|...+...-.|+.....+.. .+. .
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~-~~~~~ 245 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEML-TPRSS 245 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccc-ccccc
Confidence 457999999964222 2468999999999999999999 99999998754221123222221110 000 0
Q ss_pred eEEEEEEeeecCceEEEEeCh---hhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhh----ccCCCCC
Q 007224 150 EKVRFFHCHKRGVDRVFVDHP---WFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL----NLNSNKY 222 (612)
Q Consensus 150 ~~~~~~~~~~~gv~~~~l~~~---~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~ 222 (612)
+.........+|+.++.++.. .+..| ..-+.....|...+++.++.+ ...
T Consensus 246 ~~~~~~~~~~~g~rIvRip~GP~~~~l~K-------------------e~L~~~l~ef~d~~l~~~~~~~~~~~~~---- 302 (1050)
T TIGR02468 246 ENDGDEMGESSGAYIIRIPFGPRDKYIPK-------------------EELWPYIPEFVDGALSHIVNMSKVLGEQ---- 302 (1050)
T ss_pred ccccccccCCCCeEEEEeccCCCCCCcCH-------------------HHHHHHHHHHHHHHHHHHHhhhhhhhhh----
Confidence 000111123358888877521 12333 011122344555555544321 000
Q ss_pred CC-C-CCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCC-CcccccccccccCC
Q 007224 223 FS-G-PYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNL-PAQFKSSFDFIDGY 299 (612)
Q Consensus 223 ~~-~-~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~ 299 (612)
+. + +-.|| |||+|+|.+++++..++.. .++|+|+|.|.+.-... ..+...+. +..-. ...|
T Consensus 303 ~~~~~~~~pD-vIHaHyw~sG~aa~~L~~~-------lgVP~V~T~HSLgr~K~---~~ll~~g~~~~~~~-----~~~y 366 (1050)
T TIGR02468 303 IGSGHPVWPY-VIHGHYADAGDSAALLSGA-------LNVPMVLTGHSLGRDKL---EQLLKQGRMSKEEI-----NSTY 366 (1050)
T ss_pred hccccCCCCC-EEEECcchHHHHHHHHHHh-------hCCCEEEECccchhhhh---hhhccccccccccc-----cccc
Confidence 00 0 11389 9999999999999999987 48999999997532110 00000000 00000 0000
Q ss_pred CCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccch--hh----hh---------ccCeEEeeCCCccCccC
Q 007224 300 NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELD--NI----IR---------KTGIKGIVNGMDVQEWN 364 (612)
Q Consensus 300 ~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~--~~----~~---------~~~i~vI~Ngvd~~~~~ 364 (612)
. ..+.+..++..+..||.||++|+..++++...+. +.++. .. ++ ..++.|||||+|++.|.
T Consensus 367 ~---~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~-~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~ 442 (1050)
T TIGR02468 367 K---IMRRIEAEELSLDASEIVITSTRQEIEEQWGLYD-GFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIV 442 (1050)
T ss_pred c---hHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhc-cCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHcc
Confidence 0 1134456678899999999999999998765321 11210 00 00 12899999999999998
Q ss_pred CCCccccccccCcchhh------cchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc----CCcE
Q 007224 365 PLTDKYIGVKYDASTVM------DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQ 434 (612)
Q Consensus 365 p~~~~~~~~~~~~~~~~------~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~----~~~~ 434 (612)
|..... +..... ...+.....++..+ . ++++++|+|+||+.++||++.|++|+.++.. +++.
T Consensus 443 P~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~r~~-~--~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~ 514 (1050)
T TIGR02468 443 PHDGDM-----DGETEGNEEHPAKPDPPIWSEIMRFF-T--NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT 514 (1050)
T ss_pred CCCccc-----cchhcccccccccccchhhHHHHhhc-c--cCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE
Confidence 853210 000000 00001112233332 2 2466899999999999999999999999853 3555
Q ss_pred EEEEeCCch---------hHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc----CEEEeCCCCCCCcHHHHHHHH
Q 007224 435 IIVLGTGKK---------PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMR 499 (612)
Q Consensus 435 lvivG~g~~---------~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~a----di~l~pS~~E~~gl~~lEAma 499 (612)
+|+|.++. .+...++++..+++ +++.+.+..+.+.+..+|+.| |+||+||.+|+||++++|||+
T Consensus 515 -LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMA 593 (1050)
T TIGR02468 515 -LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAA 593 (1050)
T ss_pred -EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHH
Confidence 45676542 12345666777665 456555555677888899887 699999999999999999999
Q ss_pred cCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHH
Q 007224 500 YGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPA 577 (612)
Q Consensus 500 ~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a 577 (612)
||+|||+|+.||+.|++.++.+|+++ +|.|+++++++|.+++++ ++.+.+|++++. .+.|||+.++
T Consensus 594 cGlPVVASdvGG~~EII~~g~nGlLV----------dP~D~eaLA~AL~~LL~D--pelr~~m~~~gr~~v~~FSWe~ia 661 (1050)
T TIGR02468 594 HGLPMVATKNGGPVDIHRVLDNGLLV----------DPHDQQAIADALLKLVAD--KQLWAECRQNGLKNIHLFSWPEHC 661 (1050)
T ss_pred hCCCEEEeCCCCcHHHhccCCcEEEE----------CCCCHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHCCHHHHH
Confidence 99999999999999999999999988 999999999999999998 677777777663 4679999999
Q ss_pred HHHHHHHHHHHHc
Q 007224 578 KKWEETLLNLEVA 590 (612)
Q Consensus 578 ~~~~~~y~~l~~~ 590 (612)
++|++.|..+...
T Consensus 662 ~~yl~~i~~~~~~ 674 (1050)
T TIGR02468 662 KTYLSRIASCRPR 674 (1050)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999988644
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=346.16 Aligned_cols=364 Identities=19% Similarity=0.238 Sum_probs=259.6
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..|.|. .||.++++..|+++|+++||+|+|+|+.++..... ....+|++++
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---------------------~~~~~~i~v~ 57 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI---------------------RYLTNGLKVY 57 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc---------------------ccccCceeEE
Confidence 799999999996 89999999999999999999999999864321110 0112355555
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH-
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP- 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~- 244 (612)
.+........ ..+ . .+......+.+.+++ .+|| |||+|++...+..
T Consensus 58 ~~p~~~~~~~-------~~~---------~----~~~~~~~~l~~~~~~------------~~~D-iIh~~~~~~~~~~~ 104 (398)
T cd03796 58 YLPFVVFYNQ-------STL---------P----TFFGTFPLLRNILIR------------ERIT-IVHGHQAFSALAHE 104 (398)
T ss_pred EecceeccCC-------ccc---------c----chhhhHHHHHHHHHh------------cCCC-EEEECCCCchHHHH
Confidence 4432111000 000 0 011111222222222 2699 9999987655432
Q ss_pred -HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEe
Q 007224 245 -CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 245 -~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 323 (612)
.++... .++|+|++.|+... ..+. .. .....+++..++.+|.+++
T Consensus 105 ~~~~~~~-------~~~~~v~t~h~~~~-----~~~~-----~~-----------------~~~~~~~~~~~~~~d~ii~ 150 (398)
T cd03796 105 ALLHART-------MGLKTVFTDHSLFG-----FADA-----SS-----------------IHTNKLLRFSLADVDHVIC 150 (398)
T ss_pred HHHHhhh-------cCCcEEEEeccccc-----ccch-----hh-----------------HHhhHHHHHhhccCCEEEE
Confidence 222222 57899999996421 0000 00 0011344556789999999
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~ 403 (612)
+|+...+.+.. ..+.+.+ ++.+||||+|.+.|.|...+ .+++.
T Consensus 151 ~s~~~~~~~~~--~~~~~~~------k~~vi~ngvd~~~f~~~~~~-----------------------------~~~~~ 193 (398)
T cd03796 151 VSHTSKENTVL--RASLDPE------RVSVIPNAVDSSDFTPDPSK-----------------------------RDNDK 193 (398)
T ss_pred ecHhHhhHHHH--HhCCChh------hEEEEcCccCHHHcCCCccc-----------------------------CCCCc
Confidence 99998876542 1344333 89999999999888765321 12356
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcC
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~ad 479 (612)
++|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.+..+.+.+..+++.||
T Consensus 194 ~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad 271 (398)
T cd03796 194 ITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP--KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGH 271 (398)
T ss_pred eEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc--hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 899999999999999999999998864 789999999987 4566777777654 4577777777888889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHH-H
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-A 558 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~-~ 558 (612)
++++||..|+||++++|||+||+|||+++.||..|++.++..++ .+.|+++++++|.+++++.... .
T Consensus 272 ~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~~~------------~~~~~~~l~~~l~~~l~~~~~~~~ 339 (398)
T cd03796 272 IFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILL------------AEPDVESIVRKLEEAISILRTGKH 339 (398)
T ss_pred EEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCceee------------cCCCHHHHHHHHHHHHhChhhhhh
Confidence 99999999999999999999999999999999999998775433 3459999999999999873322 2
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 559 LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 559 ~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
..+.+++.+.++|||+.++++|+++|++++..
T Consensus 340 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 340 DPWSFHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 33444555789999999999999999998743
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-39 Score=346.30 Aligned_cols=395 Identities=17% Similarity=0.195 Sum_probs=275.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++|+..|+|. .||++.++..|+++|.++||+|+|+|+.. .++. |.... .........+..+|+++
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~~-~~~~-~~~~~--------~~~~~~~~~~~~~~i~v 68 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAPP-YYPQ-WRVGE--------GYSAWRYRRESEGGVTV 68 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecCC-CCCC-CCCCc--------ccccccceeeecCCeEE
Confidence 8999999998886 89999999999999999999999999762 1111 11000 00001112233467887
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHh-hHhhccCCCCCCCCCCCCcEEEEecCCcc--c
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHT--S 241 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~pDvvih~h~~~~--~ 241 (612)
++++....... . .......+..|....... .+.+. .+|| |||+|.+.. .
T Consensus 69 ~r~~~~~~~~~----------~-------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~p~~~~~ 120 (412)
T PRK10307 69 WRCPLYVPKQP----------S-------GLKRLLHLGSFALSSFFPLLAQRR----------WRPD-RVIGVVPTLFCA 120 (412)
T ss_pred EEccccCCCCc----------c-------HHHHHHHHHHHHHHHHHHHhhccC----------CCCC-EEEEeCCcHHHH
Confidence 76642110000 0 000111111122222221 22211 2699 899986442 2
Q ss_pred hHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCC-cccccccccccCCCCCcCCcchhHHHHHHHhcCE
Q 007224 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 320 (612)
....++++. .++|+++++|+......+. .+.. ..+ .......+++..++.+|.
T Consensus 121 ~~~~~~~~~-------~~~~~v~~~~d~~~~~~~~------~~~~~~~~-------------~~~~~~~~~~~~~~~ad~ 174 (412)
T PRK10307 121 PGARLLARL-------SGARTWLHIQDYEVDAAFG------LGLLKGGK-------------VARLATAFERSLLRRFDN 174 (412)
T ss_pred HHHHHHHHh-------hCCCEEEEeccCCHHHHHH------hCCccCcH-------------HHHHHHHHHHHHHhhCCE
Confidence 333444443 4789999999644311000 0100 000 000112345667889999
Q ss_pred EEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCC
Q 007224 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 400 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~ 400 (612)
++++|+..++.+.+ ++.+.+ ++.+||||+|.+.|.|.... ....++++++++.
T Consensus 175 ii~~S~~~~~~~~~---~~~~~~------~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~- 227 (412)
T PRK10307 175 VSTISRSMMNKARE---KGVAAE------KVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPD- 227 (412)
T ss_pred EEecCHHHHHHHHH---cCCCcc------cEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCC-
Confidence 99999999999875 555544 89999999999888764211 1334677888763
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCC-CceEEEeccChHHHHHHHHhc
Q 007224 401 RNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 401 ~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~-~~i~~~~~~~~~~~~~~l~~a 478 (612)
+.++|+|+||+.++||++.|++|++++.+ ++++|+|+|+|+ .++.++++.++++ .++.+.+..+.+.+.++++.|
T Consensus 228 -~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~a 304 (412)
T PRK10307 228 -GKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGG--GKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMA 304 (412)
T ss_pred -CCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCCh--hHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhc
Confidence 45899999999999999999999998865 689999999998 5667777776554 357777766788888999999
Q ss_pred CEEEeCCCCCC----CcHHHHHHHHcCCceEEcCCCC--cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEP----CGLIQLHAMRYGTVPIVASTGG--LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 479 di~l~pS~~E~----~gl~~lEAma~G~PvI~s~~gg--~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
|++++||..|+ +|.+++|||+||+|||+|+.|| +.|++. .+|+++ +++|+++++++|.++++
T Consensus 305 Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~----------~~~d~~~la~~i~~l~~ 372 (412)
T PRK10307 305 DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCV----------EPESVEALVAAIAALAR 372 (412)
T ss_pred CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEe----------CCCCHHHHHHHHHHHHh
Confidence 99999999998 5778999999999999999876 457776 589987 99999999999999998
Q ss_pred hhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+ ++.+.+|++++ +.++|||+.++++|+++|++++.
T Consensus 373 ~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 410 (412)
T PRK10307 373 Q--ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVA 410 (412)
T ss_pred C--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 8 55666666665 46889999999999999999875
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=348.06 Aligned_cols=391 Identities=19% Similarity=0.197 Sum_probs=257.1
Q ss_pred ccccHHHHhhhhHHHHHhCCC--eEEEEeecCCccc--ccCCccEEEEEEeCCeeeEEEEEEeeecCceEEEEeChhhhh
Q 007224 99 KTGGLGDVLGGLPPALAANGH--RVMTIAPRYDQYK--DAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLA 174 (612)
Q Consensus 99 ~~GG~~~~~~~La~~L~~~Gh--~V~vit~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~ 174 (612)
..||++.++.+|+++|+++|| +|+|+|..++.-. ..+. .......+|++++.++...
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~----------------~~~~~~~~gv~v~r~~~~~--- 84 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYA----------------QPIERIAPGARIVRLPFGP--- 84 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccC----------------CCeeEeCCCcEEEEecCCC---
Confidence 489999999999999999997 9999997643210 0000 0112334688887774211
Q ss_pred hhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCC
Q 007224 175 KVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPK 254 (612)
Q Consensus 175 ~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~ 254 (612)
+ .+.. ..+-...+..+...+.+.++... .+|| |||+|+|..+++..+++..
T Consensus 85 ~---------~~~~-----~~~~~~~~~~~~~~l~~~~~~~~----------~~~D-vIH~h~~~~~~~~~~~~~~---- 135 (439)
T TIGR02472 85 R---------RYLR-----KELLWPYLDELADNLLQHLRQQG----------HLPD-LIHAHYADAGYVGARLSRL---- 135 (439)
T ss_pred C---------CCcC-----hhhhhhhHHHHHHHHHHHHHHcC----------CCCC-EEEEcchhHHHHHHHHHHH----
Confidence 0 0100 00001112344455555555431 1599 9999998888877777664
Q ss_pred CCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHc
Q 007224 255 GMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS 334 (612)
Q Consensus 255 ~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~ 334 (612)
.++|+|+|.|+...... ..+...++...... ..+ .......+.+..++.+|.|+++|+........
T Consensus 136 ---~~~p~V~t~H~~~~~~~---~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 201 (439)
T TIGR02472 136 ---LGVPLIFTGHSLGREKR---RRLLAAGLKPQQIE-----KQY---NISRRIEAEEETLAHASLVITSTHQEIEEQYA 201 (439)
T ss_pred ---hCCCEEEecccccchhh---hhcccCCCChhhhh-----hhc---chHHHHHHHHHHHHhCCEEEECCHHHHHHHHH
Confidence 47899999996432100 00000010000000 000 00112235667888999999999765444321
Q ss_pred cccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCccc
Q 007224 335 GEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE 414 (612)
Q Consensus 335 ~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~ 414 (612)
. ..+++.+ ++.+||||+|++.|.|.... ......+..+ ++++.+ ++.++|+|+||+.+
T Consensus 202 ~-~~~~~~~------ki~vIpnGvd~~~f~~~~~~------------~~~~~~~~~~-~~~~~~--~~~~~i~~vGrl~~ 259 (439)
T TIGR02472 202 L-YDSYQPE------RMQVIPPGVDLSRFYPPQSS------------EETSEIDNLL-APFLKD--PEKPPILAISRPDR 259 (439)
T ss_pred h-ccCCCcc------ceEEECCCcChhhcCCCCcc------------ccchhHHHHH-Hhhccc--cCCcEEEEEcCCcc
Confidence 0 1244444 89999999999999775321 0001112222 233333 34579999999999
Q ss_pred ccCHHHHHHHHHhccc--CCcEEE-EEeCCch--hH-------HHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc--
Q 007224 415 QKGSDILAAAIPHFIK--ENVQII-VLGTGKK--PM-------EKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA-- 478 (612)
Q Consensus 415 ~Kg~d~ll~a~~~l~~--~~~~lv-ivG~g~~--~~-------~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~a-- 478 (612)
.||++.|++|+.++.. .+.+++ |+|+|+. .+ .+.+.++..+++ +++.+.+..+.+++..+|+.|
T Consensus 260 ~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~ 339 (439)
T TIGR02472 260 RKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAAR 339 (439)
T ss_pred cCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 9999999999986532 234444 5677652 11 122344444433 456655555677888899877
Q ss_pred --CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH
Q 007224 479 --DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 479 --di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~ 556 (612)
|++|+||.+|+||++++|||+||+|||+|+.||+.|++.++.+|+++ ++.|+++++++|.+++++ +
T Consensus 340 ~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~ 407 (439)
T TIGR02472 340 SRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLV----------DVLDLEAIASALEDALSD--S 407 (439)
T ss_pred cCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHhC--H
Confidence 99999999999999999999999999999999999999999999987 999999999999999998 5
Q ss_pred HHHHHHHHHH---HHhcCCcHHHHHHHHHHHH
Q 007224 557 QALAEMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 557 ~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~ 585 (612)
..+.+|++++ +.++|||+.++++|+++++
T Consensus 408 ~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 408 SQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 5566666655 5789999999999999863
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=345.11 Aligned_cols=386 Identities=19% Similarity=0.263 Sum_probs=273.8
Q ss_pred EEEEeccccCcc-----ccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecC
Q 007224 87 ILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 87 Il~v~~~~~P~~-----~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
|++++....|+. ..||++.++.+|+++|.++||+|+|+|+........ .....+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~--------------------~~~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQPP--------------------VVEVAPG 60 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC--------------------ccccCCC
Confidence 466776666652 259999999999999999999999999763211100 0112356
Q ss_pred ceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhH-HHHHHHHHHH-HhhHhhccCCCCCCCCCCCCcEEEEecCCc
Q 007224 162 VDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQL-RFSLLCQAAL-EAPRILNLNSNKYFSGPYGEDVVFVANDWH 239 (612)
Q Consensus 162 v~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~pDvvih~h~~~ 239 (612)
++++.+....+... ...... .+..|....+ ..++.. ..+|| |||+|+|.
T Consensus 61 ~~v~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~D-iih~h~~~ 111 (405)
T TIGR03449 61 VRVRNVVAGPYEGL------------------DKEDLPTQLCAFTGGVLRAEARHE----------PGYYD-LIHSHYWL 111 (405)
T ss_pred cEEEEecCCCcccC------------------CHHHHHHHHHHHHHHHHHHHhhcc----------CCCCC-eEEechHH
Confidence 66665532111100 000011 1111222222 222221 12699 89999988
Q ss_pred cchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcC
Q 007224 240 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 319 (612)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad 319 (612)
.++++.+++.. .++|+|+++|+...... ..+..... +.......+.+..+..+|
T Consensus 112 ~~~~~~~~~~~-------~~~p~v~t~h~~~~~~~---~~~~~~~~----------------~~~~~~~~~e~~~~~~~d 165 (405)
T TIGR03449 112 SGQVGWLLRDR-------WGVPLVHTAHTLAAVKN---AALADGDT----------------PEPEARRIGEQQLVDNAD 165 (405)
T ss_pred HHHHHHHHHHh-------cCCCEEEeccchHHHHH---HhccCCCC----------------CchHHHHHHHHHHHHhcC
Confidence 87777666654 47899999996532100 00000000 000011123356788999
Q ss_pred EEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 320 MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 320 ~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
.++++|+...+.+.. .++.+.+ ++.+|+||+|.+.|.|.+ +...+.+++++.
T Consensus 166 ~vi~~s~~~~~~~~~--~~~~~~~------ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~ 217 (405)
T TIGR03449 166 RLIANTDEEARDLVR--HYDADPD------RIDVVAPGADLERFRPGD--------------------RATERARLGLPL 217 (405)
T ss_pred eEEECCHHHHHHHHH--HcCCChh------hEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCC
Confidence 999999998888764 2455433 899999999998886542 344567778763
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhccc--CC--cEEEEEeCCc--h-hHHHHHHHHHHHCC--CceEEEeccChHH
Q 007224 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN--VQIIVLGTGK--K-PMEKQLEQLEILYP--EKARGVAKFNIPL 470 (612)
Q Consensus 400 ~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~--~~lvivG~g~--~-~~~~~l~~l~~~~~--~~i~~~~~~~~~~ 470 (612)
+.++|+|+||+.++||++.+++|++++.+ ++ ++|+|+|.+. . ...+.++++.++.+ .++.+.+..+.+.
T Consensus 218 --~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~ 295 (405)
T TIGR03449 218 --DTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEE 295 (405)
T ss_pred --CCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHH
Confidence 45899999999999999999999999855 44 9999999632 1 34566777777665 3577776667788
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
+..+|+.||++++||..|+||++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.++
T Consensus 296 ~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~la~~i~~~ 365 (405)
T TIGR03449 296 LVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLV----------DGHDPADWADALARL 365 (405)
T ss_pred HHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEEC----------CCCCHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999987 899999999999999
Q ss_pred HHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHHH
Q 007224 551 LATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+++ ++.+.+|++++. .++|||+.++++|+++|++++.
T Consensus 366 l~~--~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 366 LDD--PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred HhC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 987 566666666653 4789999999999999998763
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=340.39 Aligned_cols=373 Identities=22% Similarity=0.297 Sum_probs=267.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++|+..|+|. ..||.+.++..|+++|.++ |+|+|++...+.. ..+|+++
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~--------------------------~~~~~~~ 52 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQRF--------------------------DSEGLTV 52 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCchh--------------------------cCCCeEE
Confidence 8999999998875 4599999999999999987 8888887652210 1123444
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.+..+..... +... +..+...+. .... ..++| |||+|+|..++.+
T Consensus 53 ~~~~~~~~~~~------------------~~~~---~~~~~~~~~---~~~~---------~~~~d-ivh~~~~~~~~~~ 98 (388)
T TIGR02149 53 KGYRPWSELKE------------------ANKA---LGTFSVDLA---MAND---------PVDAD-VVHSHTWYTFLAG 98 (388)
T ss_pred EEecChhhccc------------------hhhh---hhhhhHHHH---HhhC---------CCCCC-eEeecchhhhhHH
Confidence 33321110000 0000 001111111 1111 12689 9999998877666
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
.+++.. .++|+++++|+......+... ..+ .++ .....+.+..+..+|.++++
T Consensus 99 ~~~~~~-------~~~p~v~~~h~~~~~~~~~~~---~~~------------~~~-----~~~~~~~~~~~~~ad~vi~~ 151 (388)
T TIGR02149 99 HLAKKL-------YDKPLVVTAHSLEPLRPWKEE---QLG------------GGY-----KLSSWAEKTAIEAADRVIAV 151 (388)
T ss_pred HHHHHh-------cCCCEEEEeeccccccccccc---ccc------------cch-----hHHHHHHHHHHhhCCEEEEc
Confidence 655543 589999999975432111000 000 000 01123456678899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+.+.+ .++... ++.+||||+|.+.|.|.. ...++++++++ ++.+
T Consensus 152 S~~~~~~~~~~~-~~~~~~------~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~--~~~~ 202 (388)
T TIGR02149 152 SGGMREDILKYY-PDLDPE------KVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGID--RSRP 202 (388)
T ss_pred cHHHHHHHHHHc-CCCCcc------eEEEecCCCChhhcCCCc--------------------hHHHHHHhCCC--CCce
Confidence 999999887521 133333 799999999998887642 44567888876 3558
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc--hhHHHHHHHHHHHCCC---ceEEEe-ccChHHHHHHHHhc
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPE---KARGVA-KFNIPLAHMIIAGA 478 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~---~i~~~~-~~~~~~~~~~l~~a 478 (612)
+|+|+||+.+.||++.++++++++. ++++++++|.|. ..+.+.++++..+++. ++.+.. ..+.+.+..+|+.|
T Consensus 203 ~i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 203 YILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred EEEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhC
Confidence 9999999999999999999999984 578999988765 3345666666555442 355544 35677888999999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCH------HHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV------AAVSTTVRRALA 552 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~------~~la~~l~~ll~ 552 (612)
|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ ++.|+ ++++++|.++++
T Consensus 282 Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~~~~~~~l~~~i~~l~~ 351 (388)
T TIGR02149 282 EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLV----------PPDNSDADGFQAELAKAINILLA 351 (388)
T ss_pred CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEc----------CCCCCcccchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999987 77787 999999999999
Q ss_pred hhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+ ++.+.+|++++ ..++|||+.+++++.++|++++
T Consensus 352 ~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 352 D--PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred C--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 8 66666776665 4688999999999999999763
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=348.30 Aligned_cols=375 Identities=18% Similarity=0.232 Sum_probs=264.9
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecC
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
+++|||+++.... |....||.+.++.+|+++|.++||+|+++++..+. .+. ..|
T Consensus 56 ~~~mrI~~~~~~~-~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~-~~~------------------------~~g 109 (465)
T PLN02871 56 SRPRRIALFVEPS-PFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV-PQE------------------------FHG 109 (465)
T ss_pred CCCceEEEEECCc-CCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC-Ccc------------------------ccC
Confidence 6789999998543 33458999999999999999999999999986321 111 012
Q ss_pred ceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccc
Q 007224 162 VDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~ 241 (612)
+.++.+... .. ..|.. ....+. +...+.+.++.. +|| |||+|.....
T Consensus 110 ~~v~~~~~~--~~---------~~~~~--------~~~~~~-~~~~l~~~i~~~------------kpD-iIh~~~~~~~ 156 (465)
T PLN02871 110 AKVIGSWSF--PC---------PFYQK--------VPLSLA-LSPRIISEVARF------------KPD-LIHASSPGIM 156 (465)
T ss_pred ceeeccCCc--CC---------ccCCC--------ceeecc-CCHHHHHHHHhC------------CCC-EEEECCCchh
Confidence 222111000 00 00000 000000 011222333332 699 9999974332
Q ss_pred h-HHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCE
Q 007224 242 L-IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 242 ~-~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 320 (612)
. ....+... .++|+|++.|+..... .+ ..... ......+.+++...+.+|.
T Consensus 157 ~~~~~~~ak~-------~~ip~V~~~h~~~~~~-~~-----~~~~~---------------~~~~~~~~~~r~~~~~ad~ 208 (465)
T PLN02871 157 VFGALFYAKL-------LCVPLVMSYHTHVPVY-IP-----RYTFS---------------WLVKPMWDIIRFLHRAADL 208 (465)
T ss_pred HHHHHHHHHH-------hCCCEEEEEecCchhh-hh-----cccch---------------hhHHHHHHHHHHHHhhCCE
Confidence 2 22223332 4889999999642100 00 00000 0001122345667789999
Q ss_pred EEecCHHHHHHHHccccCCc-cchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 321 VLTVSPHYAQELVSGEDKGV-ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~g~-~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
++++|+..++.+.+ .+. +.+ ++.+|+||+|.+.|.|... ...++.++...
T Consensus 209 ii~~S~~~~~~l~~---~~~~~~~------kv~vi~nGvd~~~f~p~~~-------------------~~~~~~~~~~~- 259 (465)
T PLN02871 209 TLVTSPALGKELEA---AGVTAAN------RIRVWNKGVDSESFHPRFR-------------------SEEMRARLSGG- 259 (465)
T ss_pred EEECCHHHHHHHHH---cCCCCcC------eEEEeCCccCccccCCccc-------------------cHHHHHHhcCC-
Confidence 99999999999886 332 222 7999999999998877532 12234444321
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 400 ~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
.++.++|+|+||+.++||++.++++++++ ++++|+|+|+|+ +++.++++..+. ++.+.+..+.+++..+|+.||
T Consensus 260 ~~~~~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~--~~~~l~~~~~~~--~V~f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 260 EPEKPLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP--YREELEKMFAGT--PTVFTGMLQGDELSQAYASGD 333 (465)
T ss_pred CCCCeEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh--HHHHHHHHhccC--CeEEeccCCHHHHHHHHHHCC
Confidence 12568999999999999999999999988 589999999987 567777777654 477777777788889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec---CceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~ 556 (612)
++|+||..|+||++++|||+||+|||+++.||+.|++.+ +.+|+++ +++|+++++++|.+++++ +
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~ 401 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLY----------TPGDVDDCVEKLETLLAD--P 401 (465)
T ss_pred EEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEe----------CCCCHHHHHHHHHHHHhC--H
Confidence 999999999999999999999999999999999999999 9999988 999999999999999998 6
Q ss_pred HHHHHHHHHHH--HhcCCcHHHHHHHHH-HHHHHHHc
Q 007224 557 QALAEMMKNGM--AQDLSWKGPAKKWEE-TLLNLEVA 590 (612)
Q Consensus 557 ~~~~~~~~~~~--~~~~sw~~~a~~~~~-~y~~l~~~ 590 (612)
+.+.+|++++. .++|||+.+++++++ +|+++...
T Consensus 402 ~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 402 ELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 66677776663 478999999999998 79988754
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=332.88 Aligned_cols=361 Identities=16% Similarity=0.261 Sum_probs=262.4
Q ss_pred eEEEEeccccCcc--ccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007224 86 NILFVGTEVAPWS--KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 86 kIl~v~~~~~P~~--~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
||+|++++-.|.+ ..||++++++++++.|+. +|+++|-..+.+++. ....+|+.
T Consensus 4 ~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~---------------------~~~~~~~~ 59 (380)
T PRK15484 4 KIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEY---------------------TKVNDNCD 59 (380)
T ss_pred eEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCCCCch---------------------hhccCCCc
Confidence 8999998755443 589999999999999943 999999886654442 01224566
Q ss_pred EEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchH
Q 007224 164 RVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~ 243 (612)
++++..+..+.+ .. .+.+. . ....+.+.+...+..... .++| |||+|+... +.
T Consensus 60 ~~~~~~~~~~~~-~~----~~~~~--------~---~~~~~~~~~~~~~~~~~~---------~~~~-vi~v~~~~~-~~ 112 (380)
T PRK15484 60 IHYIGFSRIYKR-LF----QKWTR--------L---DPLPYSQRILNIAHKFTI---------TKDS-VIVIHNSMK-LY 112 (380)
T ss_pred eEEEEeccccch-hh----hhhhc--------c---CchhHHHHHHHHHHhcCC---------CCCc-EEEEeCcHH-hH
Confidence 666632221111 00 00000 0 112233334443333211 1477 999997332 22
Q ss_pred HHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEe
Q 007224 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 323 (612)
.. ++.. +.++|+++++|+... ...+..++.+++
T Consensus 113 ~~-~~~~------~~~~~~v~~~h~~~~----------------------------------------~~~~~~~~~ii~ 145 (380)
T PRK15484 113 RQ-IRER------APQAKLVMHMHNAFE----------------------------------------PELLDKNAKIIV 145 (380)
T ss_pred HH-HHhh------CCCCCEEEEEecccC----------------------------------------hhHhccCCEEEE
Confidence 22 2222 267899999995311 112346799999
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~ 403 (612)
+|++.++.+.+. .+ ..++.+||||+|...|.+.. ...++++++++. +.
T Consensus 146 ~S~~~~~~~~~~----~~------~~~i~vIpngvd~~~~~~~~--------------------~~~~~~~~~~~~--~~ 193 (380)
T PRK15484 146 PSQFLKKFYEER----LP------NADISIVPNGFCLETYQSNP--------------------QPNLRQQLNISP--DE 193 (380)
T ss_pred cCHHHHHHHHhh----CC------CCCEEEecCCCCHHHcCCcc--------------------hHHHHHHhCCCC--CC
Confidence 999999988751 12 22789999999988886642 334567778753 44
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCc-------hhHHHHHHHHHHHCCCceEEEeccChHHHHHH
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-------KPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 474 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~-------~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~ 474 (612)
++|+|+||+.+.||++.|++|+.++.+ ++++|+|+|+|. ..+.+.++++..+++.++.+.+..+.+.+..+
T Consensus 194 ~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~ 273 (380)
T PRK15484 194 TVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNY 273 (380)
T ss_pred eEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHH
Confidence 789999999999999999999999865 789999999874 23566777787777777877777778888899
Q ss_pred HHhcCEEEeCCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 475 IAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 475 l~~adi~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|+.||++++||.+ |+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++.|+++++++|.+++++
T Consensus 274 ~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l---------~~~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 274 YPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHL---------AEPMTSDSIISDINRTLAD 344 (380)
T ss_pred HHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEE---------eCCCCHHHHHHHHHHHHcC
Confidence 9999999999986 99999999999999999999999999999999999953 3789999999999999998
Q ss_pred hCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 554 ~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+ +. .+|++++ +.++|||+.++++|+++|++..
T Consensus 345 ~--~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 345 P--EL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred H--HH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 4 32 4455544 5789999999999999998753
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=344.02 Aligned_cols=431 Identities=15% Similarity=0.148 Sum_probs=270.7
Q ss_pred CceEEEEecccc----Cc---cccccHHHHhhhhHHHH--------HhCCC----eEEEEeecCCcccccCCccEEEEEE
Q 007224 84 GLNILFVGTEVA----PW---SKTGGLGDVLGGLPPAL--------AANGH----RVMTIAPRYDQYKDAWDTDVVIELK 144 (612)
Q Consensus 84 ~MkIl~v~~~~~----P~---~~~GG~~~~~~~La~~L--------~~~Gh----~V~vit~~~~~~~~~~~~~~~~~~~ 144 (612)
.|||++|+...+ |. ..+||...|+.+|+++| +++|| +|+|+|...+.... .+-....+.
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~-~~~~~~~e~- 332 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG-TTCNQRLEK- 332 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc-ccccccccc-
Confidence 489999998762 11 13799999999999985 69999 77799987432111 000000000
Q ss_pred eCCeeeEEEEEEeeecCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchh--H-HHHHHHHHHHHhhHh-hccCCC
Q 007224 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQ--L-RFSLLCQAALEAPRI-LNLNSN 220 (612)
Q Consensus 145 ~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~-l~~~~~ 220 (612)
....+|+.++.++.... ..... ..|.... + -...|+..+.+.+.. ...
T Consensus 333 -----------~~~~~~~~I~rvp~g~~----------~~~~~----~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~--- 384 (784)
T TIGR02470 333 -----------VYGTEHAWILRVPFRTE----------NGIIL----RNWISRFEIWPYLETFAEDAEKEILAELQG--- 384 (784)
T ss_pred -----------ccCCCceEEEEecCCCC----------ccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhcCC---
Confidence 00113455554431100 00000 0011111 1 123455555554432 221
Q ss_pred CCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCC
Q 007224 221 KYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYN 300 (612)
Q Consensus 221 ~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 300 (612)
+|| +||+|.|.+++++..++.. .++|.++|.|.+..... .......-.....+.
T Consensus 385 -------~pD-lIHahy~d~glva~lla~~-------lgVP~v~t~HsL~~~K~-~~~g~~~~~~e~~~~---------- 438 (784)
T TIGR02470 385 -------KPD-LIIGNYSDGNLVASLLARK-------LGVTQCTIAHALEKTKY-PDSDIYWQEFEDKYH---------- 438 (784)
T ss_pred -------CCC-EEEECCCchHHHHHHHHHh-------cCCCEEEECCcchhhcc-cccccccccchhHHH----------
Confidence 599 9999999999999888876 59999999997643111 100000000000000
Q ss_pred CCcCCcchhHHHHHHHhcCEEEecCHHHHHH----HH---ccccCCcc-chhh-----hhccCeEEeeCCCccCccCCCC
Q 007224 301 KPVRGRKINWMKAGILESDMVLTVSPHYAQE----LV---SGEDKGVE-LDNI-----IRKTGIKGIVNGMDVQEWNPLT 367 (612)
Q Consensus 301 ~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~----l~---~~~~~g~~-~~~~-----~~~~~i~vI~Ngvd~~~~~p~~ 367 (612)
....+.-....+..||.|||.|...... +. +...+..+ +-.+ ....++.+||+|+|...|.|.+
T Consensus 439 ---~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~ 515 (784)
T TIGR02470 439 ---FSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYS 515 (784)
T ss_pred ---hhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCC
Confidence 0001111335677899999999755332 11 10001110 0000 0123889999999999887754
Q ss_pred ccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCch--
Q 007224 368 DKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-- 443 (612)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~-- 443 (612)
.+.-... ....-.+....++.+.++.+|+..++++++|+++||++++||++.|++|+.++.. ++++|+|+|++..
T Consensus 516 ~~~~r~~-~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~ 594 (784)
T TIGR02470 516 DKEKRLT-NLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAK 594 (784)
T ss_pred chhhhhh-hhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccc
Confidence 2100000 0000000111234566788898767788999999999999999999999987743 5799999998642
Q ss_pred --------hHHHHHHHHHHHCC--CceEEEecc-ChHHHHHHHH----hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 444 --------PMEKQLEQLEILYP--EKARGVAKF-NIPLAHMIIA----GADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 444 --------~~~~~l~~l~~~~~--~~i~~~~~~-~~~~~~~~l~----~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.+.+.+.+++.+++ +++.+.+.. +.....++++ .+|++++||++|+||++++|||+||+|||+|+
T Consensus 595 ~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~ 674 (784)
T TIGR02470 595 ESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATR 674 (784)
T ss_pred cccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcC
Confidence 13456677777775 456655532 2333333443 46899999999999999999999999999999
Q ss_pred CCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh--hCHHHHHHHHHHHH---HhcCCcHHHHHHHHHH
Q 007224 509 TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGM---AQDLSWKGPAKKWEET 583 (612)
Q Consensus 509 ~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~--~~~~~~~~~~~~~~---~~~~sw~~~a~~~~~~ 583 (612)
+||+.|+|.++.+|+++ +|.|+++++++|.++++. .+++.+.+++++++ .++|||+.++++++++
T Consensus 675 ~GG~~EiV~dg~tGfLV----------dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l 744 (784)
T TIGR02470 675 FGGPLEIIQDGVSGFHI----------DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTL 744 (784)
T ss_pred CCCHHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999988 999999999999998741 12677777877764 5899999999999988
Q ss_pred H
Q 007224 584 L 584 (612)
Q Consensus 584 y 584 (612)
.
T Consensus 745 ~ 745 (784)
T TIGR02470 745 A 745 (784)
T ss_pred H
Confidence 6
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-37 Score=324.26 Aligned_cols=365 Identities=23% Similarity=0.231 Sum_probs=259.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++ +|. .||.+.++..|+++|+++||+|++++...+...... ..++.+
T Consensus 1 mki~~~~---~p~--~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~-----------------------~~~~~~ 52 (371)
T cd04962 1 MKIGIVC---YPT--YGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY-----------------------SPNIFF 52 (371)
T ss_pred CceeEEE---EeC--CCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh-----------------------ccCeEE
Confidence 8999997 353 799999999999999999999999997532111100 011111
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.++.+.+... . ... | .......+.+.++. ++|| |||+|.+.....+
T Consensus 53 ~~~~~~~~~~~-~-----~~~--------~------~~~~~~~l~~~i~~------------~~~d-ivh~~~~~~~~~~ 99 (371)
T cd04962 53 HEVEVPQYPLF-Q-----YPP--------Y------DLALASKIAEVAKR------------YKLD-LLHVHYAVPHAVA 99 (371)
T ss_pred EEecccccchh-h-----cch--------h------HHHHHHHHHHHHhc------------CCcc-EEeecccCCccHH
Confidence 11111100000 0 000 0 01122333344433 3799 9999976654444
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
.++...... ..++|+++++|+..... .+.. .....+.+..++.+|.++++
T Consensus 100 ~~~~~~~~~---~~~~~~i~~~h~~~~~~---------~~~~------------------~~~~~~~~~~~~~~d~ii~~ 149 (371)
T cd04962 100 AYLAREILG---KKDLPVVTTLHGTDITL---------VGQD------------------PSFQPATRFSIEKSDGVTAV 149 (371)
T ss_pred HHHHHHhcC---cCCCcEEEEEcCCcccc---------cccc------------------ccchHHHHHHHhhCCEEEEc
Confidence 444332211 03789999999643210 0000 01223556778899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+... ++ . ..++.+||||+|...+.+.. +...+++++++. +.+
T Consensus 150 s~~~~~~~~~~--~~-~------~~~i~vi~n~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~ 198 (371)
T cd04962 150 SESLRQETYEL--FD-I------TKEIEVIPNFVDEDRFRPKP--------------------DEALKRRLGAPE--GEK 198 (371)
T ss_pred CHHHHHHHHHh--cC-C------cCCEEEecCCcCHhhcCCCc--------------------hHHHHHhcCCCC--CCe
Confidence 99999988752 21 1 22799999999988776542 233456667653 458
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCEE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
+++++||+.+.||++.+++++.++.+ .+++|+++|+|. ..+.++++..+.+ +++.+.+. . +.+..+|+.||++
T Consensus 199 ~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~-~-~~~~~~~~~~d~~ 274 (371)
T cd04962 199 VLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGP--ERSPAERLARELGLQDDVLFLGK-Q-DHVEELLSIADLF 274 (371)
T ss_pred EEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCc--CHHHHHHHHHHcCCCceEEEecC-c-ccHHHHHHhcCEE
Confidence 89999999999999999999999866 579999999987 3455666666554 34665553 2 3467899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
++||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ ++.|++++++++.+++++ ++.+.+
T Consensus 275 v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~ 342 (371)
T cd04962 275 LLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLV----------DVGDVEAMAEYALSLLED--DELWQE 342 (371)
T ss_pred EeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEc----------CCCCHHHHHHHHHHHHhC--HHHHHH
Confidence 99999999999999999999999999999999999999999987 899999999999999987 666666
Q ss_pred HHHHH---HHhcCCcHHHHHHHHHHHHHH
Q 007224 562 MMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 562 ~~~~~---~~~~~sw~~~a~~~~~~y~~l 587 (612)
|++++ +.++|||+.++++|.++|+++
T Consensus 343 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 343 FSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 66655 468999999999999999864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=324.76 Aligned_cols=276 Identities=21% Similarity=0.238 Sum_probs=220.6
Q ss_pred CCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCc
Q 007224 227 YGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 227 ~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
.++| +||+|.++.+.....++.... .+.++++++|+...... .....
T Consensus 117 ~~~d-iihaH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~~---------------------------~~~~~ 163 (406)
T PRK15427 117 FVAD-VFIAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISSR---------------------------EVLNH 163 (406)
T ss_pred CCCC-EEEEcCChHHHHHHHHHHhCC-----CCCCeEEEEcccccccc---------------------------hhhhh
Confidence 3699 999998887776666654211 23467889996432100 00001
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHH
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 386 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 386 (612)
...+++..++.+|.++++|+..++.+.+ +|++.+ ++.+||||+|.+.|.+....
T Consensus 164 ~~~~~~~~~~~ad~vv~~S~~~~~~l~~---~g~~~~------ki~vi~nGvd~~~f~~~~~~----------------- 217 (406)
T PRK15427 164 YTPEYQQLFRRGDLMLPISDLWAGRLQK---MGCPPE------KIAVSRMGVDMTRFSPRPVK----------------- 217 (406)
T ss_pred hhHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCHH------HEEEcCCCCCHHHcCCCccc-----------------
Confidence 1234566788999999999999999986 576655 89999999999988654211
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEE
Q 007224 387 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 462 (612)
Q Consensus 387 ~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~ 462 (612)
..++...|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+ .++.++++.++++ +++.+
T Consensus 218 ------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~--~~~~l~~~~~~~~l~~~V~~ 283 (406)
T PRK15427 218 ------------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP--WERRLRTLIEQYQLEDVVEM 283 (406)
T ss_pred ------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch--hHHHHHHHHHHcCCCCeEEE
Confidence 01234679999999999999999999999975 689999999998 5677888877765 45777
Q ss_pred EeccChHHHHHHHHhcCEEEeCCCC------CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCC
Q 007224 463 VAKFNIPLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~adi~l~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~ 536 (612)
.+..+.+++.++|+.||++++||.. ||+|++++|||+||+|||+|+.||+.|++.++.+|+++ +
T Consensus 284 ~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv----------~ 353 (406)
T PRK15427 284 PGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV----------P 353 (406)
T ss_pred eCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe----------C
Confidence 7777788888999999999999974 99999999999999999999999999999999999987 9
Q ss_pred CCCHHHHHHHHHHHHH-hhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHH
Q 007224 537 PVDVAAVSTTVRRALA-TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 537 ~~d~~~la~~l~~ll~-~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l 587 (612)
++|+++++++|.++++ + ++.+.+|++++ +.++|+|+.+++++.++|+++
T Consensus 354 ~~d~~~la~ai~~l~~~d--~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 354 ENDAQALAQRLAAFSQLD--TDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCCHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999999999 7 55566666555 579999999999999999863
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=334.69 Aligned_cols=322 Identities=17% Similarity=0.181 Sum_probs=220.9
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
.|| |||+|.|.+++++..++.. .++|.|+|.|.+.-... ...+..+-.....+. .. ..
T Consensus 408 ~PD-lIHaHYwdsg~vA~~La~~-------lgVP~v~T~HsL~k~K~-~~~~~~~~~~e~~y~------------~~-~r 465 (815)
T PLN00142 408 KPD-LIIGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKY-PDSDIYWKKFDDKYH------------FS-CQ 465 (815)
T ss_pred CCC-EEEECCccHHHHHHHHHHH-------hCCCEEEEcccchhhhc-cccCCcccccchhhh------------hh-hc
Confidence 599 9999999999999999987 49999999997643111 100000000010100 00 11
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHH-------HccccCCcc-chhhh-----hccCeEEeeCCCccCccCCCCcc--ccc
Q 007224 308 INWMKAGILESDMVLTVSPHYAQEL-------VSGEDKGVE-LDNII-----RKTGIKGIVNGMDVQEWNPLTDK--YIG 372 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l-------~~~~~~g~~-~~~~~-----~~~~i~vI~Ngvd~~~~~p~~~~--~~~ 372 (612)
+.-....+..||.||+.|......+ .++..+..+ +..++ ...++.+|++|+|...|.|...+ .+.
T Consensus 466 ~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~ 545 (815)
T PLN00142 466 FTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLT 545 (815)
T ss_pred hHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHH
Confidence 2234557889999999998776422 222112221 01110 02288999999999999875321 000
Q ss_pred cccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCc-h------
Q 007224 373 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-K------ 443 (612)
Q Consensus 373 ~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~-~------ 443 (612)
.-++.. +....+....++.+|+..++++++|+++||+.++||++.|++|+.++.+ ++++|+|+|++. .
T Consensus 546 ~l~n~I---~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ 622 (815)
T PLN00142 546 SLHPSI---EELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDR 622 (815)
T ss_pred hhcccc---hhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccH
Confidence 000000 1111123344567787666778999999999999999999999998754 579999999872 1
Q ss_pred hH---HHHHHHHHHHCC--CceEEEeccC----hHHHHHHHH-hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc
Q 007224 444 PM---EKQLEQLEILYP--EKARGVAKFN----IPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 513 (612)
Q Consensus 444 ~~---~~~l~~l~~~~~--~~i~~~~~~~----~~~~~~~l~-~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 513 (612)
.. .+.+.+++.+++ +++.+.+... .+.+..+++ .+|++++||.+|+||++++|||+||+|||+|+.||+.
T Consensus 623 ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~ 702 (815)
T PLN00142 623 EEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPA 702 (815)
T ss_pred HHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHH
Confidence 11 244666777765 4555544322 233444555 5799999999999999999999999999999999999
Q ss_pred cceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh--hCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHH
Q 007224 514 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNG---MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 514 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~--~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y 584 (612)
|+|.+|.+|+++ +|.|+++++++|.++++. .+++.+.+|++++ +.++|||+.++++++++.
T Consensus 703 EIV~dG~tG~LV----------~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 703 EIIVDGVSGFHI----------DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999988 999999999999887631 1267777888776 457899999999999876
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=305.11 Aligned_cols=367 Identities=20% Similarity=0.254 Sum_probs=269.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
++|++|+.+|+|. .||++..++.|++.|-+.||.|.+++..|++... +|+. -+|+++
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~r~g------------------iryl---t~glkV 57 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVG------------------IRYL---TNGLKV 57 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccCccc------------------eeee---cCCceE
Confidence 5799999999997 9999999999999999999999999999875422 2222 257888
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
|+++-...+.. .|-..+|+. -.+.|. .+..- +-. |||.|...+.+..
T Consensus 58 yylp~~v~~n~----tT~ptv~~~-------~Pllr~---------i~lrE------------~I~-ivhghs~fS~lah 104 (426)
T KOG1111|consen 58 YYLPAVVGYNQ----TTFPTVFSD-------FPLLRP---------ILLRE------------RIE-IVHGHSPFSYLAH 104 (426)
T ss_pred EEEeeeeeecc----cchhhhhcc-------Ccccch---------hhhhh------------ceE-EEecCChHHHHHH
Confidence 88875443332 122223331 011111 11110 245 8999976666554
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
-.+.... ..|.++|||-|+ .|.+.++...- ..+.++..+.+.|++||+
T Consensus 105 e~l~har-----tMGlktVfTdHS-----lfGfad~~si~----------------------~n~ll~~sL~~id~~IcV 152 (426)
T KOG1111|consen 105 EALMHAR-----TMGLKTVFTDHS-----LFGFADIGSIL----------------------TNKLLPLSLANIDRIICV 152 (426)
T ss_pred HHHHHHH-----hcCceEEEeccc-----cccccchhhhh----------------------hcceeeeeecCCCcEEEE
Confidence 4444322 378999999995 33333322111 113344457789999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|..-++...=+ -.++ +.++.+|||.++...|.|.+.. - ...+..
T Consensus 153 shtskentvlr--~~L~------p~kvsvIPnAv~~~~f~P~~~~---------------------------~-~S~~i~ 196 (426)
T KOG1111|consen 153 SHTSKENTVLR--GALA------PAKVSVIPNAVVTHTFTPDAAD---------------------------K-PSADII 196 (426)
T ss_pred eecCCCceEEE--eccC------HhHeeeccceeeccccccCccc---------------------------c-CCCCee
Confidence 99887765521 2233 4499999999999999995321 0 123447
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCch--hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
.|+.++||.++||+|.++++++++.+ ++++|+|+|+|++ .+++.++++.. .+++...+..+.+.+.+.|.+.|+
T Consensus 197 ~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l--~~rV~~lG~v~h~~Vr~vl~~G~I 274 (426)
T KOG1111|consen 197 TIVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFL--QDRVVMLGTVPHDRVRDVLVRGDI 274 (426)
T ss_pred EEEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhc--cCceEEecccchHHHHHHHhcCcE
Confidence 89999999999999999999999987 8999999999994 34555555543 356888888899999999999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
|++||..|+||++++|||+||+|||+++.||++|++.++ .-+ . .+.++++++++++.++...+. ..
T Consensus 275 FlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~i~-~----------~~~~~~dl~~~v~~ai~~~~~--~p 340 (426)
T KOG1111|consen 275 FLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED-MIT-L----------GEPGPDDLVGAVEKAITKLRT--LP 340 (426)
T ss_pred EeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-cee-c----------cCCChHHHHHHHHHHHHHhcc--Cc
Confidence 999999999999999999999999999999999999876 222 2 566899999999999986322 12
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHcC
Q 007224 561 EMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 561 ~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~~ 591 (612)
+...+.+.+.|+|+.++++.+++|.++....
T Consensus 341 ~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 341 LEFHDRVKKMYSWKDVAERTEKVYDRAATTS 371 (426)
T ss_pred hhHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 2334556788999999999999999988654
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=312.71 Aligned_cols=378 Identities=18% Similarity=0.183 Sum_probs=250.3
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
|||||+..|++. ...|+++|+++||+|+++|+....... .|++++
T Consensus 1 ~il~~~~~~p~~---------~~~la~~L~~~G~~v~~~~~~~~~~~~--------------------------~~v~~~ 45 (396)
T cd03818 1 RILFVHQNFPGQ---------FRHLAPALAAQGHEVVFLTEPNAAPPP--------------------------GGVRVV 45 (396)
T ss_pred CEEEECCCCchh---------HHHHHHHHHHCCCEEEEEecCCCCCCC--------------------------CCeeEE
Confidence 699999886442 456999999999999999987432111 035555
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+..+..-. . .+.+|...........+++.+.+..+.. ..++|| |||+|.... ...
T Consensus 46 ~~~~~~~~~--------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~pd-vi~~h~~~~--~~~ 101 (396)
T cd03818 46 RYRPPRGPT--------S------GTHPYLREFEEAVLRGQAVARALLALRA-------KGFRPD-VIVAHPGWG--ETL 101 (396)
T ss_pred EecCCCCCC--------C------CCCccchhHHHHHHHHHHHHHHHHHHHh-------cCCCCC-EEEECCccc--hhh
Confidence 443211000 0 1112444444443334444444444321 135799 999996332 233
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
+++... .++|++.++|-... .. . ...+.......... ..........+....+..+|.++++|
T Consensus 102 ~l~~~~------~~~~~v~~~~~~~~-~~-~----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 102 FLKDVW------PDAPLIGYFEFYYR-AE-G----ADVGFDPEFPPSLD-----DALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred hHHHhC------CCCCEEEEEeeeec-CC-C----CCCCCCCCCCCchh-----HHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 455443 57888887762110 00 0 00011110000000 00000000111345688999999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
++.++.+.+. + ..++.+|+||+|.+.|.|.... ....+...+++ ++.++
T Consensus 165 ~~~~~~~~~~--~---------~~ki~vI~ngvd~~~f~~~~~~------------------~~~~~~~~~~~--~~~~~ 213 (396)
T cd03818 165 RWQRSTFPAE--L---------RSRISVIHDGIDTDRLRPDPQA------------------RLRLPNGRVLT--PGDEV 213 (396)
T ss_pred HHHHhhCcHh--h---------ccceEEeCCCccccccCCCchh------------------hhcccccccCC--CCCeE
Confidence 9999887641 1 1289999999999998775321 11111112222 35579
Q ss_pred EEEEcC-cccccCHHHHHHHHHhccc--CCcEEEEEeCCch-----------hHHHHHHHHHHHC-CCceEEEeccChHH
Q 007224 406 IGFIGR-LEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-----------PMEKQLEQLEILY-PEKARGVAKFNIPL 470 (612)
Q Consensus 406 il~iGr-l~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~-----------~~~~~l~~l~~~~-~~~i~~~~~~~~~~ 470 (612)
|+|+|| ++++||++.+++|+.++.+ ++++|+|+|++.. ..++.++++..+. .+++.+.+..+.+.
T Consensus 214 i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~ 293 (396)
T cd03818 214 ITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQ 293 (396)
T ss_pred EEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHH
Confidence 999998 9999999999999999865 7999999997421 1223344444322 24577777778888
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
+..+|+.||++++||..|++|++++|||+||+|||+|+.||+.|++.++.+|+++ ++.|+++++++|.++
T Consensus 294 ~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv----------~~~d~~~la~~i~~l 363 (396)
T cd03818 294 YLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLV----------DFFDPDALAAAVIEL 363 (396)
T ss_pred HHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEc----------CCCCHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999987 999999999999999
Q ss_pred HHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHH
Q 007224 551 LATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~ 582 (612)
+++ ++.+.+|++++ +.+.|||+.++++|++
T Consensus 364 l~~--~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 364 LDD--PARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HhC--HHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 998 55556666555 5678999999999863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=313.85 Aligned_cols=358 Identities=18% Similarity=0.194 Sum_probs=247.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC-cccccCCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD-QYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
.||++|...+ ..||+++++..|+..|.+.||++++++.... .+.+ .....|+.
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~----------------------~~~~~~i~ 55 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRK----------------------RIQRPDVA 55 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCChhHH----------------------HHHhcCce
Confidence 4899999774 3699999999999999999999999985421 1111 01113455
Q ss_pred EEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchH
Q 007224 164 RVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~ 243 (612)
++.+.... ...+ .+...+.++++.. +|| |||+|...+. .
T Consensus 56 ~~~~~~~~-----------------------~~~~----~~~~~l~~~l~~~------------~~D-ivh~~~~~~~-~ 94 (374)
T TIGR03088 56 FYALHKQP-----------------------GKDV----AVYPQLYRLLRQL------------RPD-IVHTRNLAAL-E 94 (374)
T ss_pred EEEeCCCC-----------------------CCCh----HHHHHHHHHHHHh------------CCC-EEEEcchhHH-H
Confidence 54432110 0001 1222333444433 699 9999964332 2
Q ss_pred HHHHHHhhcCCCCCCCceE-EEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHH-HHhcCEE
Q 007224 244 PCYLKTMYKPKGMYKSAKV-VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG-ILESDMV 321 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~v-v~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~~~ad~v 321 (612)
..++... .+.|+ +++.|....... .+ ......+++.. ...+|.+
T Consensus 95 ~~~~~~~-------~~~~~~i~~~h~~~~~~~----------------------~~-----~~~~~~~~~~~~~~~~~~~ 140 (374)
T TIGR03088 95 AQLPAAL-------AGVPARIHGEHGRDVFDL----------------------DG-----SNWKYRWLRRLYRPLIHHY 140 (374)
T ss_pred HHHHHHh-------cCCCeEEEeecCcccccc----------------------hh-----hHHHHHHHHHHHHhcCCeE
Confidence 2222222 24443 344442211000 00 00112344333 3468999
Q ss_pred EecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCC
Q 007224 322 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 401 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~ 401 (612)
+++|+..++.+.+ .++++.+ ++.+|+||+|.+.|.+.... +...+.+...+ +
T Consensus 141 i~vs~~~~~~~~~--~~~~~~~------~~~vi~ngvd~~~~~~~~~~------------------~~~~~~~~~~~--~ 192 (374)
T TIGR03088 141 VAVSRDLEDWLRG--PVKVPPA------KIHQIYNGVDTERFHPSRGD------------------RSPILPPDFFA--D 192 (374)
T ss_pred EEeCHHHHHHHHH--hcCCChh------hEEEeccCccccccCCCccc------------------hhhhhHhhcCC--C
Confidence 9999999998875 2455544 78999999999888765311 11122222222 3
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCchhHHHHHHHHHHHCCC--ceEEEeccChHHHHH
Q 007224 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKPMEKQLEQLEILYPE--KARGVAKFNIPLAHM 473 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~d~ll~a~~~l~~------~~~~lvivG~g~~~~~~~l~~l~~~~~~--~i~~~~~~~~~~~~~ 473 (612)
+.++|+++||+.++||++.+++|+.++.+ ++++|+++|+|. ..+.++++..+++. .+.+. +. .+....
T Consensus 193 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~-g~-~~~~~~ 268 (374)
T TIGR03088 193 ESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP--ARGACEQMVRAAGLAHLVWLP-GE-RDDVPA 268 (374)
T ss_pred CCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc--hHHHHHHHHHHcCCcceEEEc-CC-cCCHHH
Confidence 56899999999999999999999998854 278999999987 45667777766652 23332 22 345678
Q ss_pred HHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+++.||++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ +++|+++++++|.+++++
T Consensus 269 ~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~----------~~~d~~~la~~i~~l~~~ 338 (374)
T TIGR03088 269 LMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALV----------PPGDAVALARALQPYVSD 338 (374)
T ss_pred HHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999987 999999999999999987
Q ss_pred hCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 554 ~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l 587 (612)
++.+.++++++ +.++|||+.++++|+++|+++
T Consensus 339 --~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 339 --PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred --HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 55555565554 568999999999999999876
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=304.87 Aligned_cols=329 Identities=18% Similarity=0.181 Sum_probs=237.7
Q ss_pred ceEEEEeccccC--ccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007224 85 LNILFVGTEVAP--WSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 85 MkIl~v~~~~~P--~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
|||++|+..+.| ....||.++++..|+.+|.++||+|+++++..+..... .
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~-----------------~---------- 53 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAP-----------------L---------- 53 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccc-----------------e----------
Confidence 899999998754 33599999999999999999999999999864321110 0
Q ss_pred eEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccch
Q 007224 163 DRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~ 242 (612)
........... +.............+.+.++. .+|| |||+|.+...+
T Consensus 54 --~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~------------~~~D-ivh~~~~~~~~ 100 (335)
T cd03802 54 --VPVVPEPLRLD------------------APGRDRAEAEALALAERALAA------------GDFD-IVHNHSLHLPL 100 (335)
T ss_pred --eeccCCCcccc------------------cchhhHhhHHHHHHHHHHHhc------------CCCC-EEEecCcccch
Confidence 00000000000 000001111222223333332 2699 99999877766
Q ss_pred HHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEE
Q 007224 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 322 (612)
. . ... .++|+++++|+..... ...........+.++
T Consensus 101 ~--~-~~~-------~~~~~v~~~h~~~~~~----------------------------------~~~~~~~~~~~~~~~ 136 (335)
T cd03802 101 P--F-ARP-------LPVPVVTTLHGPPDPE----------------------------------LLKLYYAARPDVPFV 136 (335)
T ss_pred h--h-hcc-------cCCCEEEEecCCCCcc----------------------------------cchHHHhhCcCCeEE
Confidence 5 2 211 5889999999654310 001233456788999
Q ss_pred ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCC
Q 007224 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~ 402 (612)
++|+...+.+.. . .++.+||||+|.+.|.+.. .+
T Consensus 137 ~~s~~~~~~~~~---~----------~~~~vi~ngvd~~~~~~~~---------------------------------~~ 170 (335)
T cd03802 137 SISDAQRRPWPP---L----------PWVATVHNGIDLDDYPFRG---------------------------------PK 170 (335)
T ss_pred EecHHHHhhccc---c----------cccEEecCCcChhhCCCCC---------------------------------CC
Confidence 999998887654 1 2799999999998886531 13
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHH---CCCceEEEeccChHHHHHHHHhcC
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL---YPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~---~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
...++|+||+.+.||++.+++++.+. +++|+|+|.|.. ...+.....+ ..+++.+.+..+.+.+..+++.+|
T Consensus 171 ~~~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d 245 (335)
T cd03802 171 GDYLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSD--PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNAR 245 (335)
T ss_pred CCEEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCC--HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCc
Confidence 46899999999999999999998765 799999999863 2222222222 245688888888888888999999
Q ss_pred EEEeCCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHH
Q 007224 480 FILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 558 (612)
Q Consensus 480 i~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~ 558 (612)
++++||.+ |+||++++|||+||+|||+++.||..|++.++.+|+++ ++ +++++++|.++++. .
T Consensus 246 ~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~----------~~--~~~l~~~l~~l~~~--~-- 309 (335)
T cd03802 246 ALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLV----------DS--VEELAAAVARADRL--D-- 309 (335)
T ss_pred EEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEe----------CC--HHHHHHHHHHHhcc--H--
Confidence 99999985 99999999999999999999999999999999999987 54 99999999998764 2
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 559 LAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 559 ~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
.+.+++.+.++|||+.++++|+++|+
T Consensus 310 -~~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 310 -RAACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred -HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 12344556799999999999999984
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=313.94 Aligned_cols=378 Identities=15% Similarity=0.139 Sum_probs=235.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
||||+|...+ ..||+|+.+.+|++.|.++||+|.++..+.+....... .+++..
T Consensus 1 mkil~i~~~l----~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~----------------------~~~~~~ 54 (405)
T PRK10125 1 MNILQFNVRL----AEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVS----------------------HQNYPQ 54 (405)
T ss_pred CeEEEEEeee----cCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccc----------------------cCCcce
Confidence 8999999753 47999999999999999999999999987432221000 001111
Q ss_pred EEEeCh-------hhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecC
Q 007224 165 VFVDHP-------WFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 237 (612)
Q Consensus 165 ~~l~~~-------~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~ 237 (612)
.....+ ....+ .++ ...++ -..+..+.+.. .++|| |||+|.
T Consensus 55 ~~~~~~~~~~~~~~~~~~-~~~---~~~~~----------------~~~~~~~~i~~-----------~~~pD-viHlH~ 102 (405)
T PRK10125 55 VIKHTPRMTAMANIALFR-LFN---RDLFG----------------NFNELYRTITR-----------TPGPV-VLHFHV 102 (405)
T ss_pred EEEecccHHHHHHHHHHH-hcc---hhhcc----------------hHHHHHHHHhh-----------ccCCC-EEEEec
Confidence 111111 00111 000 00000 01111122211 24799 999998
Q ss_pred CccchHHHH--HHH----hhcCCCCCCCceEEEEEecCc-ccccCCcccccccCCCcccccccc---cccCCCCCc----
Q 007224 238 WHTSLIPCY--LKT----MYKPKGMYKSAKVVFCIHNIA-YQGRFAFEDFGLLNLPAQFKSSFD---FIDGYNKPV---- 303 (612)
Q Consensus 238 ~~~~~~~~~--l~~----~~~~~~~~~~~~vv~~iH~~~-~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~---- 303 (612)
.+.+++... ++. .++ ..++|+|+|+|+.+ +.|.+...+ ....+..... ....|....
T Consensus 103 ~~~~~~~~~~l~~~~~~~~~~----~~~~piV~TlHd~~~~tg~c~~~~-----~C~~~~~~c~~Cp~l~~~~~~~~d~~ 173 (405)
T PRK10125 103 LHSYWLNLKSVVRFCEKVKNH----KPDVTLVWTLHDHWSVTGRCAFTD-----GCEGWKTGCQKCPTLNNYPPVKVDRA 173 (405)
T ss_pred ccCceecHHHHHHHHhhhhcc----cCCCCEEEecccccccCCCcCCCc-----ccccccccCCCCCCccCCCCCccchH
Confidence 887544332 211 011 15789999999864 334443211 0001111110 000111100
Q ss_pred ---CCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchh
Q 007224 304 ---RGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 380 (612)
Q Consensus 304 ---~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~ 380 (612)
+.++....+.....++.++++|++.++.+.+. ++. .++.+|+||+|++.+.+....
T Consensus 174 ~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~--~~~--------~~i~vI~NGid~~~~~~~~~~----------- 232 (405)
T PRK10125 174 HQLVAGKRQLFREMLALGCQFISPSQHVADAFNSL--YGP--------GRCRIINNGIDMATEAILAEL----------- 232 (405)
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH--cCC--------CCEEEeCCCcCcccccccccc-----------
Confidence 11122223333445789999999999988752 332 289999999997543322110
Q ss_pred hcchHHHHHHHHHHhCCCCCCCCcEEEEEcCc--ccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCC
Q 007224 381 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE 458 (612)
Q Consensus 381 ~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl--~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~ 458 (612)
...+ ..+++++|+++|+. .+.||++.+++|+.++. ++++|+|+|.|++.. ..
T Consensus 233 --------~~~~------~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~ 286 (405)
T PRK10125 233 --------PPVR------ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AG 286 (405)
T ss_pred --------cccc------cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------cc
Confidence 0000 11355789999994 37899999999999884 589999999876321 12
Q ss_pred ceEEEecc-ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCC
Q 007224 459 KARGVAKF-NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 459 ~i~~~~~~-~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~ 537 (612)
.+...+.. +...+..+|+.||++|+||.+|+||++++|||+||+|||+|++||++|++.++ +|+++ ++
T Consensus 287 ~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv----------~~ 355 (405)
T PRK10125 287 NVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTV----------SE 355 (405)
T ss_pred ceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEE----------CC
Confidence 24444432 44566789999999999999999999999999999999999999999999875 89987 99
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 007224 538 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 538 ~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l 587 (612)
+|+++|++.+...+.+.......+.+++.+.+.|||+.++++|+++|+++
T Consensus 356 ~d~~~La~~~~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 356 EEVLQLAQLSKPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred CCHHHHHhccCHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 99999998654333220000011224444678899999999999999864
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=309.97 Aligned_cols=380 Identities=23% Similarity=0.276 Sum_probs=264.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
+++++.+...+| ..||++.++..|+.+|+++||+|+|++...+...... ....+++.+
T Consensus 7 ~~~~~~~~~~~~--~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~--------------------~~~~~~~~~ 64 (398)
T cd03800 7 LHGSPLAQPGGA--DTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI--------------------VELAPGVRV 64 (398)
T ss_pred ccccccccCCCC--CCCceeehHHHHHHHHhccCceEEEEEecCCcccCCc--------------------cccccceEE
Confidence 444444444344 3799999999999999999999999997643211100 011234555
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.+...... .+. .......+..++..+...++... .+|| +||+|.+..++..
T Consensus 65 ~~~~~~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~~~~~~~~ 116 (398)
T cd03800 65 VRVPAGPAE-----------YLP------KEELWPYLDEFADDLLRFLRREG----------GRPD-LIHAHYWDSGLVA 116 (398)
T ss_pred Eeccccccc-----------CCC------hhhcchhHHHHHHHHHHHHHhcC----------CCcc-EEEEecCccchHH
Confidence 444321100 000 00000111223444444444321 1599 9999998888777
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
..++.. .++|++++.|+........ ...... .........++..++.+|.++++
T Consensus 117 ~~~~~~-------~~~~~i~~~h~~~~~~~~~------~~~~~~-------------~~~~~~~~~~~~~~~~ad~ii~~ 170 (398)
T cd03800 117 LLLARR-------LGIPLVHTFHSLGAVKRRH------LGAADT-------------YEPARRIEAEERLLRAADRVIAS 170 (398)
T ss_pred HHHHhh-------cCCceEEEeecccccCCcc------cccccc-------------cchhhhhhHHHHHHhhCCEEEEc
Confidence 766654 4889999999653211100 000000 00011223456678899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+...+.+.+. ++.. ..++.+|+||+|.+.|.+.... ...+.+.+.+ ++.+
T Consensus 171 s~~~~~~~~~~--~~~~------~~~~~vi~ng~~~~~~~~~~~~-------------------~~~~~~~~~~--~~~~ 221 (398)
T cd03800 171 TPQEAEELYSL--YGAY------PRRIRVVPPGVDLERFTPYGRA-------------------EARRARLLRD--PDKP 221 (398)
T ss_pred CHHHHHHHHHH--cccc------ccccEEECCCCCccceecccch-------------------hhHHHhhccC--CCCc
Confidence 99998888752 2222 1268999999999888665321 1113344443 3458
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchh----HHHHHHHHHHHCC--CceEEEeccChHHHHHHHH
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~ 476 (612)
+|+|+||+.+.||++.+++++.++.+ ++++|+++|++... ....++.+..+++ +++.+.+..+.+++..+++
T Consensus 222 ~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 301 (398)
T cd03800 222 RILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYR 301 (398)
T ss_pred EEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHH
Confidence 99999999999999999999999975 68999999987632 2344566666554 4577777778888889999
Q ss_pred hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH
Q 007224 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 477 ~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~ 556 (612)
.||++++||..|+||++++|||+||+|||+++.+|..|++.++.+|+++ ++.|+++++++|.+++++ +
T Consensus 302 ~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~ 369 (398)
T cd03800 302 AADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLV----------DPRDPEALAAALRRLLTD--P 369 (398)
T ss_pred hCCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEe----------CCCCHHHHHHHHHHHHhC--H
Confidence 9999999999999999999999999999999999999999999999988 899999999999999998 6
Q ss_pred HHHHHHHHHH---HHhcCCcHHHHHHHH
Q 007224 557 QALAEMMKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 557 ~~~~~~~~~~---~~~~~sw~~~a~~~~ 581 (612)
+.+.+|++++ +.++|||+.++++|+
T Consensus 370 ~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 370 ALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 6677777666 358999999999986
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=320.41 Aligned_cols=472 Identities=19% Similarity=0.252 Sum_probs=351.7
Q ss_pred eEEEEecccc-----CccccccHHHHhhhhHHHHHhCCCeEEEEeecCCc-cc--------------ccCCc--------
Q 007224 86 NILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YK--------------DAWDT-------- 137 (612)
Q Consensus 86 kIl~v~~~~~-----P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~-~~--------------~~~~~-------- 137 (612)
-++++|.||. |. ..||+|...+...++++..|...+-+...|.+ |- +.|+.
T Consensus 87 ~~aYFs~E~gl~~~lpi-YsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~ 165 (778)
T cd04299 87 VAAYFSMEFGLHESLPI-YSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV 165 (778)
T ss_pred eeEEeccccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE
Confidence 3459998865 42 68999999999999999999999999876542 11 11211
Q ss_pred ------cEEEEEEeCCeeeEEEEEEeeecCceEEEEeChhhhhhhhcCCCC-CcccCCCCCCCCcchhHH---HHHHHHH
Q 007224 138 ------DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQ-SKIYGPRTGEDYQDNQLR---FSLLCQA 207 (612)
Q Consensus 138 ------~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~w~~~~-~~~y~~~~~~~~~~~~~~---~~~~~~~ 207 (612)
...+.+.+.++...++.+.....+++++++|++.+-.. .|.+.. ..+|++ ++..| +.+|+.+
T Consensus 166 ~~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~-~~~R~iT~~LYg~-------D~~~Rl~Qe~~Lg~a 237 (778)
T cd04299 166 RDADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENS-PDDRGITDRLYGG-------DQETRIQQEILLGIG 237 (778)
T ss_pred ecCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccc-hhhcccccCCCCC-------cHHHHHHHHHHHHHH
Confidence 23556777777778889988888999999998763111 122122 247873 34555 6999999
Q ss_pred HHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhh-cCCCC-------CCCceEEEEEecCcccc--cCCc
Q 007224 208 ALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMY-KPKGM-------YKSAKVVFCIHNIAYQG--RFAF 277 (612)
Q Consensus 208 ~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~-~~~~~-------~~~~~vv~~iH~~~~~~--~~~~ 277 (612)
.+++++.+++ .|| |||+||||+++++..+.+.+ +..+. ....++|||+|++.++| +|+.
T Consensus 238 gl~~Lr~lg~----------~pd-ViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~ 306 (778)
T cd04299 238 GVRALRALGI----------KPT-VYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPP 306 (778)
T ss_pred HHHHHHHhCC----------CCe-EEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCH
Confidence 9999988864 599 99999999999998322211 11111 12578999999999999 9997
Q ss_pred cccc--------ccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHH---HHHHHccccCCccchhhh
Q 007224 278 EDFG--------LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY---AQELVSGEDKGVELDNII 346 (612)
Q Consensus 278 ~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~---~~~l~~~~~~g~~~~~~~ 346 (612)
..+. .++++............-. .....++++.++..|+.+.+||+-+ .+++......|.+..
T Consensus 307 ~l~~~~~~~~~~~lgl~~~~~~~lg~e~~~~---~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~--- 380 (778)
T cd04299 307 DLVERYFGPYARELGLSRDRFLALGRENPGD---DPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVE--- 380 (778)
T ss_pred HHHHHHhhHHHHHcCCCHHHHhhhccccccC---ccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcc---
Confidence 7663 3566654332221111000 0134699999999999999999987 555554223344432
Q ss_pred hccCeEEeeCCCccCccC-CCCcccccccc--------------------CcchhhcchHHHHHHHHHHh----------
Q 007224 347 RKTGIKGIVNGMDVQEWN-PLTDKYIGVKY--------------------DASTVMDAKPLLKEALQAEV---------- 395 (612)
Q Consensus 347 ~~~~i~vI~Ngvd~~~~~-p~~~~~~~~~~--------------------~~~~~~~~~~~~k~~l~~~~---------- 395 (612)
..++..|.||||...|. |..++.+.... ....+...|..+|.++++.+
T Consensus 381 -~~~i~~ITNGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~ 459 (778)
T cd04299 381 -EVPIGHVTNGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLR 459 (778)
T ss_pred -cCceeceeCCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 33799999999999998 77666553221 12334567777888776664
Q ss_pred -----------CCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCc------hhHHHHHHHH
Q 007224 396 -----------GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQL 452 (612)
Q Consensus 396 -----------gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~------~~~~lvivG~g~------~~~~~~l~~l 452 (612)
+.+.+++.++|+|++|+..+||.++++..+.++.+ .++|||+.|++. +.+.+.+.++
T Consensus 460 ~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~ 539 (778)
T cd04299 460 RGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEF 539 (778)
T ss_pred cCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHH
Confidence 55677888999999999999999999999888744 479999999987 4566788888
Q ss_pred HH--HCCCceEEEeccChHHHHHHHHhcCEEEeCCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEeccc
Q 007224 453 EI--LYPEKARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF 528 (612)
Q Consensus 453 ~~--~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~ 528 (612)
.. ++++++.+...++..+++.++++||++++||+ +|+||++.+-||..|.+-+++-.|...|.- ++.|||.||.-
T Consensus 540 a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 540 SRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred HhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 88 66778999999999999999999999999999 899999999999999999999999999887 78999999762
Q ss_pred cc--ccCCCCCCCHHHHHHHHHHHHH-hh-C------HHHHHHHHHHHHHh---cCCcHHHHHHHHHHHH
Q 007224 529 SV--DCEAVDPVDVAAVSTTVRRALA-TY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEETLL 585 (612)
Q Consensus 529 ~~--~~~~v~~~d~~~la~~l~~ll~-~~-~------~~~~~~~~~~~~~~---~~sw~~~a~~~~~~y~ 585 (612)
.. +.+.-|..|.++|-++|++.+- .+ + +..+.+|.+++|.+ .|||++++++|.+-|.
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 21 2233355778888899976554 22 1 46799999999887 9999999999987554
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=304.49 Aligned_cols=359 Identities=18% Similarity=0.185 Sum_probs=243.2
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+ ..||+++++..|+..|.+.||+|+++++..+. +.++.. +.+ +....|.+.
T Consensus 1 ki~~~~~~~----~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~--~~~~~~-----------~~~---~~~~~g~~~- 59 (372)
T cd03792 1 KVLHVNSTP----YGGGVAEILHSLVPLMRDLGVDTRWEVIKGDP--EFFNVT-----------KKF---HNALQGADI- 59 (372)
T ss_pred CeEEEeCCC----CCCcHHHHHHHHHHHHHHcCCCceEEecCCCh--hHHHHH-----------HHh---hHhhcCCCC-
Confidence 699999873 37999999999999999999999999875221 100000 000 000001111
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhH-hhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPR-ILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+ ..... ...+......... .+ ...+|| |||+|++....++
T Consensus 60 --------------------~-------~~~~~--~~~~~~~~~~~~~~~~---------~~~~~D-vv~~h~~~~~~~~ 100 (372)
T cd03792 60 --------------------E-------LSEEE--KEIYLEWNEENAERPL---------LDLDAD-VVVIHDPQPLALP 100 (372)
T ss_pred --------------------C-------CCHHH--HHHHHHHHHHHhcccc---------ccCCCC-EEEECCCCchhHH
Confidence 0 11111 0111111111111 11 123799 9999988753333
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
...+ . .++|++++.|+..... ....+.+++..+..+|.+++.
T Consensus 101 ~~~~-~-------~~~~~i~~~H~~~~~~------------------------------~~~~~~~~~~~~~~~d~~i~~ 142 (372)
T cd03792 101 LFKK-K-------RGRPWIWRCHIDLSSP------------------------------NRRVWDFLQPYIEDYDAAVFH 142 (372)
T ss_pred Hhhh-c-------CCCeEEEEeeeecCCC------------------------------cHHHHHHHHHHHHhCCEEeec
Confidence 2222 1 3789999999532100 012345667778899999998
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|..+.. .+++.. ++ +||||+|....... .++ +.....+++++|++. +.+
T Consensus 143 ~~~~~~-------~~~~~~------~~-vipngvd~~~~~~~-------~~~--------~~~~~~~~~~~~~~~--~~~ 191 (372)
T cd03792 143 LPEYVP-------PQVPPR------KV-IIPPSIDPLSGKNR-------ELS--------PADIEYILEKYGIDP--ERP 191 (372)
T ss_pred HHHhcC-------CCCCCc------eE-EeCCCCCCCccccC-------CCC--------HHHHHHHHHHhCCCC--CCc
Confidence 843221 222221 44 99999996531110 011 122456777888763 558
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCch---hHHHHHHHHHHH--CCCceEEEecc--ChHHHHHHH
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEIL--YPEKARGVAKF--NIPLAHMII 475 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~--~~~~i~~~~~~--~~~~~~~~l 475 (612)
+|+++||+.++||++.+++|+..+.+ ++++|+|+|+|+. ...+.++++.+. ...++.+.+.. +.+++..+|
T Consensus 192 ~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 271 (372)
T cd03792 192 YITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQ 271 (372)
T ss_pred EEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHH
Confidence 99999999999999999999998865 6899999999852 233344454432 23456665554 667888899
Q ss_pred HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC
Q 007224 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 476 ~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 555 (612)
+.||++++||.+|+||++++|||+||+|||+|+.||..+++.++.+|+++ + +.++++.+|.+++.+
T Consensus 272 ~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~----------~--~~~~~a~~i~~ll~~-- 337 (372)
T cd03792 272 RASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLV----------D--TVEEAAVRILYLLRD-- 337 (372)
T ss_pred HhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEe----------C--CcHHHHHHHHHHHcC--
Confidence 99999999999999999999999999999999999999999999999976 3 567889999999987
Q ss_pred HHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHH
Q 007224 556 TQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 556 ~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l 587 (612)
++.+.+|++++ +.++|||+.++++|+++|+++
T Consensus 338 ~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 338 PELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 66666776665 468999999999999999863
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=313.59 Aligned_cols=380 Identities=14% Similarity=0.079 Sum_probs=237.2
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCC-CeEEEEeecCCcccc--cCCccEEEEEEeCCeeeEEEEEEeee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPRYDQYKD--AWDTDVVIELKVGDKIEKVRFFHCHK 159 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-h~V~vit~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (612)
++|||++++..|.|| .+|+...+..++..|+++| |+|++|+|.++..+. .|.....+..... ....++ . .
T Consensus 3 ~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~-~e~~~~---~-~ 75 (462)
T PLN02846 3 KKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSE-QEAYVR---Q-W 75 (462)
T ss_pred CCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchh-hhhhhh---h-h
Confidence 479999999999999 9999999999999999999 899999998653211 1110000000000 000000 0 0
Q ss_pred cCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchh---HHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEec
Q 007224 160 RGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQ---LRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 236 (612)
Q Consensus 160 ~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h 236 (612)
.+-.++++....+ ..|. ..+ .+.......+.+.++. ++|| |||+|
T Consensus 76 ~~~~v~r~~s~~~-----------p~yp--------~r~~~~~r~~~~~~~i~~~l~~------------~~pD-VIHv~ 123 (462)
T PLN02846 76 LEERISFLPKFSI-----------KFYP--------GKFSTDKRSILPVGDISETIPD------------EEAD-IAVLE 123 (462)
T ss_pred ccCeEEEeccccc-----------ccCc--------ccccccccccCChHHHHHHHHh------------cCCC-EEEEc
Confidence 0111222211100 0111 100 0111112334444443 3799 99998
Q ss_pred C-CccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCC-CCCcCCcchhHHHHH
Q 007224 237 D-WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGY-NKPVRGRKINWMKAG 314 (612)
Q Consensus 237 ~-~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~k~~ 314 (612)
+ ++.++.....+...+ .++ +|.+.|.... ... ...+ .+. ...+.....+|++..
T Consensus 124 tP~~LG~~~~g~~~~~k-----~~~-vV~tyHT~y~-~Y~-----~~~~------------~g~~~~~l~~~~~~~~~r~ 179 (462)
T PLN02846 124 EPEHLTWYHHGKRWKTK-----FRL-VIGIVHTNYL-EYV-----KREK------------NGRVKAFLLKYINSWVVDI 179 (462)
T ss_pred CchhhhhHHHHHHHHhc-----CCc-EEEEECCChH-HHH-----HHhc------------cchHHHHHHHHHHHHHHHH
Confidence 7 333443111221111 234 7888995210 000 0000 000 000001112233222
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
.+|.++++|....+ +.+ .+...+||||.+.|.|... ..++.
T Consensus 180 --~~d~vi~pS~~~~~-l~~---------------~~i~~v~GVd~~~f~~~~~---------------------~~~~~ 220 (462)
T PLN02846 180 --YCHKVIRLSAATQD-YPR---------------SIICNVHGVNPKFLEIGKL---------------------KLEQQ 220 (462)
T ss_pred --hcCEEEccCHHHHH-Hhh---------------CEEecCceechhhcCCCcc---------------------cHhhh
Confidence 48999999986655 443 3334568999998887632 11222
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHH
Q 007224 395 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 472 (612)
Q Consensus 395 ~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~ 472 (612)
.. +.+.-.+.++|+||+.++||++.|++++.++.+ ++++|+|+|+|+ .++.+++++.+++.....+.++... .
T Consensus 221 ~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp--~~~~L~~~a~~l~l~~~vf~G~~~~--~ 295 (462)
T PLN02846 221 KN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE--DSDEVKAAAEKLELDVRVYPGRDHA--D 295 (462)
T ss_pred cC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc--cHHHHHHHHHhcCCcEEEECCCCCH--H
Confidence 22 222113579999999999999999999999865 689999999998 5777888888776434344444332 2
Q ss_pred HHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 473 ~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
.+++.+|+||+||..|+||++++||||||+|||+++.++ .|++.++.+|+++ .|.++++++|.++++
T Consensus 296 ~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~------------~~~~~~a~ai~~~l~ 362 (462)
T PLN02846 296 PLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTY------------DDGKGFVRATLKALA 362 (462)
T ss_pred HHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEec------------CCHHHHHHHHHHHHc
Confidence 599999999999999999999999999999999999998 5999999999965 589999999999998
Q ss_pred hhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l 587 (612)
+. +..+ ... ..+.|||+..+++++++|+--
T Consensus 363 ~~-~~~~---~~~-a~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 363 EE-PAPL---TDA-QRHELSWEAATERFLRVADLD 392 (462)
T ss_pred cC-chhH---HHH-HHHhCCHHHHHHHHHHHhccC
Confidence 63 2222 222 236999999999999999743
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=309.05 Aligned_cols=229 Identities=16% Similarity=0.180 Sum_probs=182.0
Q ss_pred HHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHH
Q 007224 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~ 389 (612)
+.+..++.+|.|+++|+..++.+.+. ++... ...+.+|+||+|.+.|.+....
T Consensus 147 ~e~~~~~~ad~ii~~s~~~~~~~~~~--~~~~~-----~~~~~vi~n~vd~~~~~~~~~~-------------------- 199 (392)
T cd03805 147 LEEFTTGMADKIVVNSNFTASVFKKT--FPSLA-----KNPREVVYPCVDTDSFESTSED-------------------- 199 (392)
T ss_pred HHHHHhhCceEEEEcChhHHHHHHHH--hcccc-----cCCcceeCCCcCHHHcCccccc--------------------
Confidence 44556789999999999999988752 22111 1134689999999888664321
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-----CCcEEEEEeCCch------hHHHHHHHHHHH-C-
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-----ENVQIIVLGTGKK------PMEKQLEQLEIL-Y- 456 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~-----~~~~lvivG~g~~------~~~~~l~~l~~~-~- 456 (612)
..+.....+ ++.++|+++||+.+.||++.++++++++.+ ++++|+++|+++. .+.+.++++..+ .
T Consensus 200 ~~~~~~~~~--~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~ 277 (392)
T cd03805 200 PDPGLLIPK--SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLL 277 (392)
T ss_pred ccccccccC--CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcC
Confidence 011122222 355899999999999999999999999864 4899999999763 245677777766 4
Q ss_pred -CCceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCC
Q 007224 457 -PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 457 -~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v 535 (612)
.+++.+.+..+.+....+|+.||++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~---------- 347 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLC---------- 347 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEe----------
Confidence 356888888888888899999999999999999999999999999999999999999999999999986
Q ss_pred CCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHH
Q 007224 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKW 580 (612)
Q Consensus 536 ~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~ 580 (612)
++ |+++++++|.+++++ ++.+.++++++ +.++|||+.+++++
T Consensus 348 ~~-~~~~~a~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 348 EP-TPEEFAEAMLKLAND--PDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred CC-CHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 65 999999999999998 55556666655 57899999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=294.02 Aligned_cols=356 Identities=18% Similarity=0.186 Sum_probs=241.1
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..++|. ..||+++++..|+++|.++||+|+|++........ ....+|++++
T Consensus 1 ~i~~i~~~~~~~-~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~----------------------~~~~~~i~~~ 57 (363)
T cd04955 1 KIAIIGTRGIPA-KYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK----------------------ETEYNGVRLI 57 (363)
T ss_pred CeEEEecCcCCc-ccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc----------------------ccccCCceEE
Confidence 699998875553 58999999999999999999999999986322111 1122466666
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.++.+.. . ....+......+....+ . ++| ++|+|.+.....+.
T Consensus 58 ~~~~~~~--~---------------------~~~~~~~~~~~~~~~~~--~-----------~~~-~~~i~~~~~~~~~~ 100 (363)
T cd04955 58 HIPAPEI--G---------------------GLGTIIYDILAILHALF--V-----------KRD-IDHVHALGPAIAPF 100 (363)
T ss_pred EcCCCCc--c---------------------chhhhHHHHHHHHHHHh--c-----------cCC-eEEEEecCccHHHH
Confidence 5532210 0 00000000011111111 0 244 44444333322222
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcc-hhHHHHHHHhcCEEEec
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK-INWMKAGILESDMVLTV 324 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~k~~~~~ad~vi~v 324 (612)
...... .+.|+++++|+..+... ... .+ .... ....+..++.+|.++++
T Consensus 101 ~~~~~~------~~~~~v~~~h~~~~~~~---------~~~--------------~~-~~~~~~~~~~~~~~~ad~ii~~ 150 (363)
T cd04955 101 LPLLRL------KGKKVVVNMDGLEWKRA---------KWG--------------RP-AKRYLKFGEKLAVKFADRLIAD 150 (363)
T ss_pred HHHHHh------cCCCEEEEccCcceeec---------ccc--------------cc-hhHHHHHHHHHHHhhccEEEeC
Confidence 221111 47899999997543110 000 00 0011 22335567899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+.. .+|.+ . .+||||+|...+.+. ...+.+.+++ +.+
T Consensus 151 s~~~~~~~~~--~~~~~--------~-~~i~ngv~~~~~~~~----------------------~~~~~~~~~~---~~~ 194 (363)
T cd04955 151 SPGIKEYLKE--KYGRD--------S-TYIPYGADHVVSSEE----------------------DEILKKYGLE---PGR 194 (363)
T ss_pred CHHHHHHHHH--hcCCC--------C-eeeCCCcChhhcchh----------------------hhhHHhcCCC---CCc
Confidence 9999999864 24432 3 889999998766431 1223445554 235
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc--hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
.++|+||+.+.||++.+++|+.++.. +++|+++|+++ ..+.+.+++. .....++.+.+..+.+....++..||+++
T Consensus 195 ~i~~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~~~~~~~~~~~~-~~~~~~V~~~g~~~~~~~~~~~~~ad~~v 272 (363)
T cd04955 195 YYLLVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADHNTPYGKLLKEK-AAADPRIIFVGPIYDQELLELLRYAALFY 272 (363)
T ss_pred EEEEEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCCcchHHHHHHHH-hCCCCcEEEccccChHHHHHHHHhCCEEE
Confidence 78899999999999999999999865 89999999974 2344444431 22335688887778888888999999999
Q ss_pred eCCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 483 IPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 483 ~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
+||.. |+||++++|||+||+|||+|+.|+..|++.+ +|+++ ++.|. ++++|.+++++ ++.+.+
T Consensus 273 ~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~----------~~~~~--l~~~i~~l~~~--~~~~~~ 336 (363)
T cd04955 273 LHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYF----------KVGDD--LASLLEELEAD--PEEVSA 336 (363)
T ss_pred eCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEe----------cCchH--HHHHHHHHHhC--HHHHHH
Confidence 99999 9999999999999999999999999999976 67876 66665 99999999998 555556
Q ss_pred HHHHH---HHhcCCcHHHHHHHHHHHH
Q 007224 562 MMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 562 ~~~~~---~~~~~sw~~~a~~~~~~y~ 585 (612)
+++++ ..++|||+.++++|+++|+
T Consensus 337 ~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 337 MAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 65555 4678999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=301.70 Aligned_cols=347 Identities=15% Similarity=0.187 Sum_probs=240.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhC--CCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~--Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
|||++++..+.. .||+++++..|+++|.++ ||+|.++++..... ..|.. ...+.. ..+.+
T Consensus 1 mkI~~~~~~~~~---~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~-~~~~~-------------~~~~~~-~~~~~ 62 (359)
T PRK09922 1 MKIAFIGEAVSG---FGGMETVISNVINTFEESKINCEMFFFCRNDKMD-KAWLK-------------EIKYAQ-SFSNI 62 (359)
T ss_pred CeeEEecccccC---CCchhHHHHHHHHHhhhcCcceeEEEEecCCCCC-hHHHH-------------hcchhc-ccccc
Confidence 899999876433 599999999999999999 89999999763211 11100 000000 00000
Q ss_pred eEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccch
Q 007224 163 DRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~ 242 (612)
.+.+ ..... ....+.+.++. .+|| |||+|+....+
T Consensus 63 ~~~~----------------------------~~~~~----~~~~l~~~l~~------------~~~D-ii~~~~~~~~~ 97 (359)
T PRK09922 63 KLSF----------------------------LRRAK----HVYNFSKWLKE------------TQPD-IVICIDVISCL 97 (359)
T ss_pred hhhh----------------------------hcccH----HHHHHHHHHHh------------cCCC-EEEEcCHHHHH
Confidence 0000 00000 11122233333 2799 99999765545
Q ss_pred HHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEE
Q 007224 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 322 (612)
+...++.... ...+++.+.|.... . . ....+ ..+..+|.++
T Consensus 98 ~~~~~~~~~~-----~~~~~~~~~h~~~~-~--------------~-----------------~~~~~--~~~~~~d~~i 138 (359)
T PRK09922 98 YANKARKKSG-----KQFKIFSWPHFSLD-H--------------K-----------------KHAEC--KKITCADYHL 138 (359)
T ss_pred HHHHHHHHhC-----CCCeEEEEecCccc-c--------------c-----------------chhhh--hhhhcCCEEE
Confidence 4444444321 23455666663210 0 0 00000 1136899999
Q ss_pred ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccC-CCCccccccccCcchhhcchHHHHHHHHHHhCCCCCC
Q 007224 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWN-PLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 401 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~-p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~ 401 (612)
++|+..++.+.. +|++.+ ++.+|+||+|.+.+. +.. ..+
T Consensus 139 ~~S~~~~~~~~~---~~~~~~------ki~vi~N~id~~~~~~~~~-------------------------------~~~ 178 (359)
T PRK09922 139 AISSGIKEQMMA---RGISAQ------RISVIYNPVEIKTIIIPPP-------------------------------ERD 178 (359)
T ss_pred EcCHHHHHHHHH---cCCCHH------HEEEEcCCCCHHHccCCCc-------------------------------ccC
Confidence 999999999985 566554 799999999966543 211 112
Q ss_pred CCcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccC--hHHHHHHH
Q 007224 402 NIPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFN--IPLAHMII 475 (612)
Q Consensus 402 ~~~~il~iGrl~--~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~--~~~~~~~l 475 (612)
+.++|+|+||+. ++||++.+++++.++. ++++|+|+|+|+ ..+.++++.++++ +++.+.+..+ .+.+..+|
T Consensus 179 ~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~-~~~~l~ivG~g~--~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~ 255 (359)
T PRK09922 179 KPAVFLYVGRLKFEGQKNVKELFDGLSQTT-GEWQLHIIGDGS--DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKI 255 (359)
T ss_pred CCcEEEEEEEEecccCcCHHHHHHHHHhhC-CCeEEEEEeCCc--cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHH
Confidence 457899999996 4699999999999885 489999999997 4566777777654 4566665443 36677899
Q ss_pred HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 476 ~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
+.+|++++||.+|+||++++|||+||+|||+++ .||..|++.++.+|+++ +++|+++++++|.++++++
T Consensus 256 ~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv----------~~~d~~~la~~i~~l~~~~ 325 (359)
T PRK09922 256 KNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELY----------TPGNIDEFVGKLNKVISGE 325 (359)
T ss_pred hcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEE----------CCCCHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999 89999999999999987 9999999999999999984
Q ss_pred CHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 555 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 555 ~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
.......+. ....+|+-+...+++.++|.+++
T Consensus 326 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 357 (359)
T PRK09922 326 VKYQHDAIP--NSIERFYEVLYFKNLNNALFSKL 357 (359)
T ss_pred ccCCHHHHH--HHHHHhhHHHHHHHHHHHHHHHh
Confidence 321222222 23567888999999999998876
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=294.35 Aligned_cols=273 Identities=22% Similarity=0.269 Sum_probs=213.1
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+|| |||+|....++....+.+. .++|++++.|+......... . .. . . ....
T Consensus 82 ~~d-vvh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~~~---~------~~-~----------~-~~~~ 132 (367)
T cd05844 82 RPD-LVHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSLAL---L------LR-S----------R-WALY 132 (367)
T ss_pred CCC-EEEeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccchh---h------cc-c----------c-hhHH
Confidence 699 9999976555554444433 48999999996432110000 0 00 0 0 0112
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHH
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
....+..++.+|.++++|+..++.+.+ +|.+.+ ++.+++||+|.+.|.+...
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~---~~~~~~------~i~vi~~g~d~~~~~~~~~------------------- 184 (367)
T cd05844 133 ARRRRRLARRAALFIAVSQFIRDRLLA---LGFPPE------KVHVHPIGVDTAKFTPATP------------------- 184 (367)
T ss_pred HHHHHHHHHhcCEEEECCHHHHHHHHH---cCCCHH------HeEEecCCCCHHhcCCCCC-------------------
Confidence 234456678999999999999999986 465544 7999999999887765421
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHC--CCceEEE
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGV 463 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~i~~~ 463 (612)
..+.++++|+|++.+.||++.+++|+.++.+ ++++|+|+|.|+ +.+.++++..++ ..++.+.
T Consensus 185 ------------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ------------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP--LLAALEALARALGLGGRVTFL 250 (367)
T ss_pred ------------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch--HHHHHHHHHHHcCCCCeEEEC
Confidence 1244789999999999999999999999865 689999999887 556777777764 4567777
Q ss_pred eccChHHHHHHHHhcCEEEeCCC------CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCC
Q 007224 464 AKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 464 ~~~~~~~~~~~l~~adi~l~pS~------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~ 537 (612)
+..+.+++..+|+.||++++||. .|+||++++|||+||+|||+++.+|..|++.++.+|+++ ++
T Consensus 251 g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~----------~~ 320 (367)
T cd05844 251 GAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLV----------PE 320 (367)
T ss_pred CCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEE----------CC
Confidence 77777888899999999999997 499999999999999999999999999999999999987 89
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHH
Q 007224 538 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEET 583 (612)
Q Consensus 538 ~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~ 583 (612)
.|+++++++|.+++++ ++.+.+++.++ +.++|||+..+++++++
T Consensus 321 ~d~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~i 367 (367)
T cd05844 321 GDVAALAAALGRLLAD--PDLRARMGAAGRRRVEERFDLRRQTAKLEAL 367 (367)
T ss_pred CCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 9999999999999997 55566666555 56899999999998763
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=291.71 Aligned_cols=338 Identities=23% Similarity=0.267 Sum_probs=240.9
Q ss_pred ccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEEEEeChhhhhhhhc
Q 007224 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVW 178 (612)
Q Consensus 99 ~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~w 178 (612)
..||+++++..|+++|+++||+|.++++....... ....|++++.+... .+
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~~-----------------------~~~~~~~~~~~~~~---~~--- 58 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRLVAE-----------------------LEAEGSRHIKLPFI---SK--- 58 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchHHH-----------------------HHhcCCeEEEcccc---cc---
Confidence 46999999999999999999999999875221110 01123333322100 00
Q ss_pred CCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCC
Q 007224 179 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYK 258 (612)
Q Consensus 179 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~ 258 (612)
+..........+...++. .+|| +||+|+....+...++... .
T Consensus 59 ------------------~~~~~~~~~~~l~~~~~~------------~~~d-ii~~~~~~~~~~~~~~~~~-------~ 100 (355)
T cd03819 59 ------------------NPLRILLNVARLRRLIRE------------EKVD-IVHARSRAPAWSAYLAARR-------T 100 (355)
T ss_pred ------------------chhhhHHHHHHHHHHHHH------------cCCC-EEEECCCchhHHHHHHHHh-------c
Confidence 000111112223333332 3799 9999987666555544433 4
Q ss_pred CceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccC
Q 007224 259 SAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK 338 (612)
Q Consensus 259 ~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~ 338 (612)
++|+++++|+.... ..+.+..+..+|.++++|+...+.+.+ .+
T Consensus 101 ~~~~i~~~h~~~~~-----------------------------------~~~~~~~~~~~~~vi~~s~~~~~~~~~--~~ 143 (355)
T cd03819 101 RPPFVTTVHGFYSV-----------------------------------NFRYNAIMARGDRVIAVSNFIADHIRE--NY 143 (355)
T ss_pred CCCEEEEeCCchhh-----------------------------------HHHHHHHHHhcCEEEEeCHHHHHHHHH--hc
Confidence 79999999953320 013445577899999999999999874 36
Q ss_pred CccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCH
Q 007224 339 GVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 418 (612)
Q Consensus 339 g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~ 418 (612)
+++.+ ++.+||||+|...|.+.... ......++++++++ ++.++++|+||+.++||+
T Consensus 144 ~~~~~------k~~~i~ngi~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 144 GVDPD------RIRVIPRGVDLDRFDPGAVP---------------PERILALAREWPLP--KGKPVILLPGRLTRWKGQ 200 (355)
T ss_pred CCChh------hEEEecCCccccccCccccc---------------hHHHHHHHHHcCCC--CCceEEEEeeccccccCH
Confidence 66544 89999999999888654211 11122356777765 355899999999999999
Q ss_pred HHHHHHHHhccc--CCcEEEEEeCCch--hHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCEEEeCC-CCCCCc
Q 007224 419 DILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPS-RFEPCG 491 (612)
Q Consensus 419 d~ll~a~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi~l~pS-~~E~~g 491 (612)
+.+++++.++.+ ++++|+|+|.+.. .+.+.+.+...+++ +++.+.+. .+.+..+++.||++++|| ..|++|
T Consensus 201 ~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~ 278 (355)
T cd03819 201 EVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFG 278 (355)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCc
Confidence 999999999977 6899999999863 34455555555544 34555544 445668999999999999 789999
Q ss_pred HHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HH
Q 007224 492 LIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MA 568 (612)
Q Consensus 492 l~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~ 568 (612)
++++|||+||+|||+++.||..|++.++.+|+++ +++|+++++++|.+++... ++.+.++++++ +.
T Consensus 279 ~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 279 RTAVEAQAMGRPVIASDHGGARETVRPGETGLLV----------PPGDAEALAQALDQILSLL-PEGRAKMFAKARMCVE 347 (355)
T ss_pred hHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEe----------CCCCHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987 9999999999997666531 44555555544 67
Q ss_pred hcCCcHHH
Q 007224 569 QDLSWKGP 576 (612)
Q Consensus 569 ~~~sw~~~ 576 (612)
++|||+.+
T Consensus 348 ~~f~~~~~ 355 (355)
T cd03819 348 TLFSYDRM 355 (355)
T ss_pred HhhhhccC
Confidence 99999853
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=292.16 Aligned_cols=351 Identities=19% Similarity=0.227 Sum_probs=247.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++.. + ..||.++++..++.+|.++||+|++++....
T Consensus 1 MkIl~~~~~--~--~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--D--ISGGAARAAYRLHRALQAAGVDSTMLVQEKK----------------------------------- 41 (365)
T ss_pred CeEEEEecC--C--CCCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence 899999864 3 2699999999999999999999999987521
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
.+... ++ ..+|| |||+|.+....+.
T Consensus 42 ------~~~~~------------------------------------~~------------~~~~d-iih~~~~~~~~~~ 66 (365)
T cd03825 42 ------ALISK------------------------------------IE------------IINAD-IVHLHWIHGGFLS 66 (365)
T ss_pred ------hhhhC------------------------------------hh------------cccCC-EEEEEccccCccC
Confidence 00000 00 12699 8999986766554
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccc---cccccCCCC-CcCCcchhHHHHHH-HhcC
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSS---FDFIDGYNK-PVRGRKINWMKAGI-LESD 319 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~-~~~~~~~~~~k~~~-~~ad 319 (612)
..+..... .++|+++++|+......-. .. ......+... ..+...+.. ......+.+.+..+ ..++
T Consensus 67 ~~~~~~~~-----~~~~~v~~~hd~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (365)
T cd03825 67 IEDLSKLL-----DRKPVVWTLHDMWPFTGGC--HY--PGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNL 137 (365)
T ss_pred HHHHHHHH-----cCCCEEEEcccCccccccc--CC--ccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCc
Confidence 44333321 3889999999754311000 00 0000000000 000000000 00011122222222 4578
Q ss_pred EEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 320 MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 320 ~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
.++++|+..++.+.+. +.++. .++.+||||+|.+.|.|.. +...+...+++.
T Consensus 138 ~~v~~s~~~~~~~~~~--~~~~~------~~~~vi~ngi~~~~~~~~~--------------------~~~~~~~~~~~~ 189 (365)
T cd03825 138 TIVAPSRWLADCARSS--SLFKG------IPIEVIPNGIDTTIFRPRD--------------------KREARKRLGLPA 189 (365)
T ss_pred EEEehhHHHHHHHHhc--cccCC------CceEEeCCCCcccccCCCc--------------------HHHHHHHhCCCC
Confidence 8999999999888752 22332 3899999999998886542 345567777764
Q ss_pred CCCCcEEEEEcCccc--ccCHHHHHHHHHhccc---CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccC-hHHHHH
Q 007224 400 DRNIPVIGFIGRLEE--QKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-IPLAHM 473 (612)
Q Consensus 400 ~~~~~~il~iGrl~~--~Kg~d~ll~a~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~-~~~~~~ 473 (612)
+.+++++.|+... .||++.+++++..+.+ ++++++++|.+...... ....++.+.+..+ .+.+..
T Consensus 190 --~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~ 260 (365)
T cd03825 190 --DKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDESLAL 260 (365)
T ss_pred --CCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHHHHHH
Confidence 3467777777665 8999999999999975 78999999998742221 2334577777766 667888
Q ss_pred HHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|+.||++++||..|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 261 ~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~l~~l~~~ 330 (365)
T cd03825 261 IYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLA----------KPGDPEDLAEGIEWLLAD 330 (365)
T ss_pred HHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEe----------CCCCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999987 888999999999999987
Q ss_pred hCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 554 ~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l 587 (612)
++.+.++++++ +.++|||+.++++|+++|+++
T Consensus 331 --~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 331 --PDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred --HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 55555555554 568899999999999999864
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=290.20 Aligned_cols=357 Identities=20% Similarity=0.211 Sum_probs=255.2
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|...+.+ ||.+.++..|+++|.+.||+|.+++......... .....|++++
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~---------------------~~~~~~i~v~ 55 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTDRGELGE---------------------ELEEAGVPVY 55 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCcchhhhH---------------------HHHhcCCeEE
Confidence 68999987644 9999999999999999999999998753211100 0001355555
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+..+... .. ......+.+.++.. +|| +||+|.+...+...
T Consensus 56 ~~~~~~~~----------------------~~----~~~~~~~~~~~~~~------------~~d-iv~~~~~~~~~~~~ 96 (365)
T cd03807 56 CLGKRPGR----------------------PD----PGALLRLYKLIRRL------------RPD-VVHTWMYHADLYGG 96 (365)
T ss_pred EEeccccc----------------------cc----HHHHHHHHHHHHhh------------CCC-EEEeccccccHHHH
Confidence 44322100 00 01112233333332 699 89998877766665
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
...... .+.+++++.|+...... .. .........+.....+|.++++|
T Consensus 97 ~~~~~~------~~~~~i~~~~~~~~~~~-------------~~-------------~~~~~~~~~~~~~~~~~~~i~~s 144 (365)
T cd03807 97 LAARLA------GVPPVIWGIRHSDLDLG-------------KK-------------STRLVARLRRLLSSFIPLIVANS 144 (365)
T ss_pred HHHHhc------CCCcEEEEecCCccccc-------------ch-------------hHhHHHHHHHHhccccCeEEecc
Confidence 555432 47899999997543110 00 00011223344556789999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+ ++.+.+ ++.+++||+|...+.+.... +...+++++++ ++.++
T Consensus 145 ~~~~~~~~~---~~~~~~------~~~vi~~~~~~~~~~~~~~~------------------~~~~~~~~~~~--~~~~~ 195 (365)
T cd03807 145 AAAAEYHQA---IGYPPK------KIVVIPNGVDTERFSPDLDA------------------RARLREELGLP--EDTFL 195 (365)
T ss_pred HHHHHHHHH---cCCChh------heeEeCCCcCHHhcCCcccc------------------hHHHHHhcCCC--CCCeE
Confidence 999999886 455544 78999999998877654321 34456777876 35589
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHH-HCC--CceEEEeccChHHHHHHHHhcCE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-LYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~-~~~--~~i~~~~~~~~~~~~~~l~~adi 480 (612)
|+++||+.+.||++.+++++.++.+ ++++|+++|.+.. ...+++... +.+ .++...+. .+.+..+++.||+
T Consensus 196 i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi 271 (365)
T cd03807 196 IGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPD--RANLELLALKELGLEDKVILLGE--RSDVPALLNALDV 271 (365)
T ss_pred EEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcc--hhHHHHHHHHhcCCCceEEEccc--cccHHHHHHhCCE
Confidence 9999999999999999999999866 6899999999873 233333333 332 34444432 3446679999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
+++||..|++|++++|||+||+|||+++.|+..|++.+ +|+++ ++.|+++++++|.+++++ ++.+.
T Consensus 272 ~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~ 337 (365)
T cd03807 272 FVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLV----------PPGDPEALAEAIEALLAD--PALRQ 337 (365)
T ss_pred EEeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEe----------CCCCHHHHHHHHHHHHhC--hHHHH
Confidence 99999999999999999999999999999999999987 78887 889999999999999998 45555
Q ss_pred HHHHHH---HHhcCCcHHHHHHHHHHHH
Q 007224 561 EMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 561 ~~~~~~---~~~~~sw~~~a~~~~~~y~ 585 (612)
++++++ +.++|||+.++++++++|+
T Consensus 338 ~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 338 ALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 555554 5788999999999999984
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=288.93 Aligned_cols=360 Identities=24% Similarity=0.262 Sum_probs=251.5
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..|.|. .||.+.++..|+.+|+++||+|+++++.......... +.+.+.
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----------------------~~~~~~ 55 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-----------------------RVVPVP 55 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-----------------------Cceeec
Confidence 799999998885 6999999999999999999999999987432111100 000000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccc-hHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS-LIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~-~~~ 244 (612)
....+. +.. + ......+ ....+.++. ++|| +||+|..... ...
T Consensus 56 ~~~~~~-~~~---------~---------~~~~~~~----~~~~~~~~~------------~~pd-ii~~~~~~~~~~~~ 99 (364)
T cd03814 56 SVPLPG-YPE---------I---------RLALPPR----RRVRRLLDA------------FAPD-VVHIATPGPLGLAA 99 (364)
T ss_pred ccccCc-ccc---------e---------Eecccch----hhHHHHHHh------------cCCC-EEEEeccchhhHHH
Confidence 000000 000 0 0000000 111112222 2699 7888754332 222
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
..+... .++|+++++|+...+.. .... . ...........+..+..+|.++++
T Consensus 100 ~~~~~~-------~~~~~i~~~~~~~~~~~------~~~~-~--------------~~~~~~~~~~~~~~~~~~d~i~~~ 151 (364)
T cd03814 100 LRAARR-------LGIPVVTSYHTDFPEYL------RYYG-L--------------GPLSWLAWAYLRWFHNRADRVLVP 151 (364)
T ss_pred HHHHHH-------cCCCEEEEEecChHHHh------hhcc-c--------------chHhHhhHHHHHHHHHhCCEEEeC
Confidence 222222 58899999996432100 0000 0 000001134556677899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+...+.+.. .+.. ++.+++||+|...|.+... +...+.+++ ..+.+
T Consensus 152 s~~~~~~~~~---~~~~--------~~~~~~~g~~~~~~~~~~~-------------------~~~~~~~~~---~~~~~ 198 (364)
T cd03814 152 SPSLADELRA---RGFR--------RVRLWPRGVDTELFHPRRR-------------------DEALRARLG---PPDRP 198 (364)
T ss_pred CHHHHHHHhc---cCCC--------ceeecCCCccccccCcccc-------------------cHHHHHHhC---CCCCe
Confidence 9999986654 2322 7899999999988876532 122334444 23457
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
+|+|+||+.+.||++.+++++.++.+ ++++|+|+|.+.. ...++ ....++.+.+..+.+.+..+++.||++++
T Consensus 199 ~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~--~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ 272 (364)
T cd03814 199 VLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA--RARLE----ARYPNVHFLGFLDGEELAAAYASADVFVF 272 (364)
T ss_pred EEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch--HHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEE
Confidence 99999999999999999999999976 5899999999873 33333 33456777777778888899999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHH
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 563 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~ 563 (612)
||..|+||++++|||+||+|||+++.++..|++.++.+|+++ ++.|.++++++|.+++.+ ++.+.+++
T Consensus 273 ~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~ 340 (364)
T cd03814 273 PSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLV----------EPGDAEAFAAALAALLAD--PELRRRMA 340 (364)
T ss_pred CcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEc----------CCCCHHHHHHHHHHHHcC--HHHHHHHH
Confidence 999999999999999999999999999999999999999987 999999999999999998 66677777
Q ss_pred HHHH--HhcCCcHHHHHHHHHHHH
Q 007224 564 KNGM--AQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 564 ~~~~--~~~~sw~~~a~~~~~~y~ 585 (612)
+++. .++|+|+.++++++++|+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 341 ARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhhC
Confidence 7663 368999999999999884
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=290.95 Aligned_cols=353 Identities=19% Similarity=0.255 Sum_probs=250.2
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+++++.+ ..||.+.++..|+++|.++||+|++++...+....... ......
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----------------------~~~~~~ 53 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPI-----------------------DATIIL 53 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchh-----------------------hccceE
Confidence 588887653 36999999999999999999999999875321111000 000000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+... + ....+......+.++++. ++|| |||+|..++.++..
T Consensus 54 ~~~~~----~---------------------~~~~~~~~~~~~~~~~~~------------~~pd-iv~~~~~~~~~~~~ 95 (360)
T cd04951 54 NLNMS----K---------------------NPLSFLLALWKLRKILRQ------------FKPD-VVHAHMFHANIFAR 95 (360)
T ss_pred Eeccc----c---------------------cchhhHHHHHHHHHHHHh------------cCCC-EEEEcccchHHHHH
Confidence 11100 0 000111111223333333 3699 99999888777666
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
+++... .+.+++++.|+....+. ......+.....++.++++|
T Consensus 96 l~~~~~------~~~~~v~~~h~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~s 138 (360)
T cd04951 96 LLRLFL------PSPPLICTAHSKNEGGR-------------------------------LRMLAYRLTDFLSDLTTNVS 138 (360)
T ss_pred HHHhhC------CCCcEEEEeeccCchhH-------------------------------HHHHHHHHHhhccCceEEEc
Confidence 666543 57899999996432110 01112233344678889999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+... .+++.+ ++.+||||+|...|.+... .+..++++++++ ++.++
T Consensus 139 ~~~~~~~~~~--~~~~~~------~~~~i~ng~~~~~~~~~~~------------------~~~~~~~~~~~~--~~~~~ 190 (360)
T cd04951 139 KEALDYFIAS--KAFNAN------KSFVVYNGIDTDRFRKDPA------------------RRLKIRNALGVK--NDTFV 190 (360)
T ss_pred HHHHHHHHhc--cCCCcc------cEEEEccccchhhcCcchH------------------HHHHHHHHcCcC--CCCEE
Confidence 9999888752 223333 8999999999887765421 244567788875 35589
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
++|+||+.+.||++.+++++.++.+ ++++|+|+|+|+ ..+.+++...+++ +++.+.+. .+.+..+|+.||++
T Consensus 191 ~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~ 266 (360)
T cd04951 191 ILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--LRATLERLIKALGLSNRVKLLGL--RDDIAAYYNAADLF 266 (360)
T ss_pred EEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--cHHHHHHHHHhcCCCCcEEEecc--cccHHHHHHhhceE
Confidence 9999999999999999999999866 589999999988 3455666655543 34655543 23456799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
++||..|+||++++|||++|+|||+++.|++.|++.+ +|+.+ +++|+++++++|.+++++. ......
T Consensus 267 v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~----------~~~~~~~~~~~i~~ll~~~-~~~~~~ 333 (360)
T cd04951 267 VLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIV----------PISDPEALANKIDEILKMS-GEERDI 333 (360)
T ss_pred EecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEe----------CCCCHHHHHHHHHHHHhCC-HHHHHH
Confidence 9999999999999999999999999999999999987 68876 8899999999999999642 333333
Q ss_pred HH--HHHHHhcCCcHHHHHHHHHHHH
Q 007224 562 MM--KNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 562 ~~--~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
+. ++.+.+.|||+.++++|+++|+
T Consensus 334 ~~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 334 IGARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 33 3446799999999999999996
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=286.34 Aligned_cols=349 Identities=21% Similarity=0.261 Sum_probs=244.2
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+.+|+|. .||.+.++..|+++|.++||+|++++......... ....+.++.
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~----------------------~~~~~~~~~ 56 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRD----------------------EERNGHRVI 56 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchh----------------------hhccCceEE
Confidence 799999999886 89999999999999999999999999864322110 001122222
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+... ... . ... +.. . ....++.. ..+|| +||+|.........
T Consensus 57 ~~~~~--~~~-~-----~~~--------~~~---~-------~~~~~~~~----------~~~~D-ii~~~~~~~~~~~~ 99 (357)
T cd03795 57 RAPSL--LNV-A-----STP--------FSP---S-------FFKQLKKL----------AKKAD-VIHLHFPNPLADLA 99 (357)
T ss_pred Eeecc--ccc-c-----ccc--------ccH---H-------HHHHHHhc----------CCCCC-EEEEecCcchHHHH
Confidence 22110 000 0 000 000 0 00001111 13699 88988643322221
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
.+... .+.|+++++|+...... ........+++..+..+|.++++|
T Consensus 100 ~~~~~-------~~~~~i~~~h~~~~~~~---------------------------~~~~~~~~~~~~~~~~~d~vi~~s 145 (357)
T cd03795 100 LLLLP-------RKKPVVVHWHSDIVKQK---------------------------LLLKLYRPLQRRFLRRADAIVATS 145 (357)
T ss_pred HHHhc-------cCceEEEEEcChhhccc---------------------------hhhhhhhHHHHHHHHhcCEEEeCc
Confidence 11111 47899999995322110 000112234566788999999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+... +... .++.+||||+|...+.+.... .. .....+ .+.+.
T Consensus 146 ~~~~~~~~~~--~~~~-------~~~~~i~~gi~~~~~~~~~~~------------------~~---~~~~~~--~~~~~ 193 (357)
T cd03795 146 PNYAETSPVL--RRFR-------DKVRVIPLGLDPARYPRPDAL------------------EE---AIWRRA--AGRPF 193 (357)
T ss_pred HHHHHHHHHh--cCCc-------cceEEecCCCChhhcCCcchh------------------hh---HhhcCC--CCCcE
Confidence 9999877642 1111 278999999999887654210 00 112222 35589
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCEEEe
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
|+|+||+.+.||++.+++++.++. +++|+|+|+|+ ....++++.++.. .++.+.+..+.+.+..+++.||++++
T Consensus 194 i~~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~--~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ 269 (357)
T cd03795 194 FLFVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGP--LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVF 269 (357)
T ss_pred EEEecccccccCHHHHHHHHHhcc--CcEEEEEeCCh--hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEe
Confidence 999999999999999999999996 89999999987 5566667664443 46888777788888899999999999
Q ss_pred CCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec-CceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 484 PSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 484 pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
||. .|+||++++|||+||+|||+++.++..+.+.+ +.+|+++ ++.|+++++++|.+++++ ++.+.
T Consensus 270 ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~----------~~~d~~~~~~~i~~l~~~--~~~~~ 337 (357)
T cd03795 270 PSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVV----------PPGDPAALAEAIRRLLED--PELRE 337 (357)
T ss_pred CCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEe----------CCCCHHHHHHHHHHHHHC--HHHHH
Confidence 996 49999999999999999999999999998886 8999987 899999999999999998 55556
Q ss_pred HHHHHH---HHhcCCcHHHH
Q 007224 561 EMMKNG---MAQDLSWKGPA 577 (612)
Q Consensus 561 ~~~~~~---~~~~~sw~~~a 577 (612)
+|++++ +.+.|||+.++
T Consensus 338 ~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 338 RLGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHHhcchHhhC
Confidence 666555 57899999763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=306.67 Aligned_cols=283 Identities=13% Similarity=0.126 Sum_probs=202.0
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEE-EEecCcccccCCcccccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF-CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~-~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+|| |||+|.....++..++... .++|+++ +.|+... .... ..+ ..
T Consensus 400 kpD-IVH~h~~~a~~lg~lAa~~-------~gvPvIv~t~h~~~~-~~~~----------~~~---------------~~ 445 (694)
T PRK15179 400 VPS-VVHIWQDGSIFACALAALL-------AGVPRIVLSVRTMPP-VDRP----------DRY---------------RV 445 (694)
T ss_pred CCc-EEEEeCCcHHHHHHHHHHH-------cCCCEEEEEeCCCcc-ccch----------hHH---------------HH
Confidence 699 9999987777666666554 4678776 5564321 0000 000 00
Q ss_pred chhHHHHHHH--hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcch
Q 007224 307 KINWMKAGIL--ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 307 ~~~~~k~~~~--~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
........+. .++.++++|...++.+.. .+|++.+ ++.+||||+|...|.+.+..
T Consensus 446 ~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~--~~g~~~~------kI~VI~NGVd~~~f~~~~~~--------------- 502 (694)
T PRK15179 446 EYDIIYSELLKMRGVALSSNSQFAAHRYAD--WLGVDER------RIPVVYNGLAPLKSVQDDAC--------------- 502 (694)
T ss_pred HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH--HcCCChh------HEEEECCCcCHHhcCCCchh---------------
Confidence 0111111222 345667777877777764 2566654 89999999998877653210
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--Cce
Q 007224 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKA 460 (612)
Q Consensus 385 ~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i 460 (612)
+. .+..+.....++.++|+++||+.++||++.+++|+.++.+ ++++|+|+|+|+ ..+.++++..+++ +++
T Consensus 503 ---~~-~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~--~~~~L~~l~~~lgL~~~V 576 (694)
T PRK15179 503 ---TA-MMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP--LLESVREFAQRLGMGERI 576 (694)
T ss_pred ---hH-HHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc--chHHHHHHHHHcCCCCcE
Confidence 11 1111111112345799999999999999999999998864 789999999987 5677888877765 445
Q ss_pred EEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCC-
Q 007224 461 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD- 539 (612)
Q Consensus 461 ~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d- 539 (612)
.+.+ +.. .+..+|+.+|++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|+++ +++|
T Consensus 577 ~flG-~~~-dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv----------~~~d~ 644 (694)
T PRK15179 577 LFTG-LSR-RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL----------PADTV 644 (694)
T ss_pred EEcC-Ccc-hHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEe----------CCCCC
Confidence 5544 433 45679999999999999999999999999999999999999999999999999987 7666
Q ss_pred -HHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 540 -VAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 540 -~~~la~~l~~ll~~~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
.++++++|.+++.+.. .+.+.+.+++.+.++|||+.++++|+++|+
T Consensus 645 ~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 645 TAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred ChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 4689999988887532 234444455556789999999999999995
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=284.60 Aligned_cols=357 Identities=18% Similarity=0.215 Sum_probs=245.0
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..++|. ..||.+.++..|+++|+++||+|+++++............ ........ . .
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~------------~~~~~~~~--~---~ 62 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVI------------GVVVYGRP--I---D 62 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccc------------cceeeccc--c---c
Confidence 799999988774 5799999999999999999999999998743222110000 00000000 0 0
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.......... .+ .........+...+.+.++.. +|| +||+|.+.......
T Consensus 63 ~~~~~~~~~~---------~~--------~~~~~~~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~ 112 (359)
T cd03823 63 EVLRSALPRD---------LF--------HLSDYDNPAVVAEFARLLEDF------------RPD-VVHFHHLQGLGVSI 112 (359)
T ss_pred cccCCCchhh---------hh--------HHHhccCHHHHHHHHHHHHHc------------CCC-EEEECCccchHHHH
Confidence 0000000000 00 000000011223333333332 699 88998763322222
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
+....+ .++|+++++|+....... ........|.++++|
T Consensus 113 -~~~~~~-----~~~~~i~~~hd~~~~~~~-----------------------------------~~~~~~~~d~ii~~s 151 (359)
T cd03823 113 -LRAARD-----RGIPIVLTLHDYWLICPR-----------------------------------QGLFKKGGDAVIAPS 151 (359)
T ss_pred -HHHHHh-----cCCCEEEEEeeeeeecch-----------------------------------hhhhccCCCEEEEeC
Confidence 221111 478999999964321100 000011239999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+ ++... .++.+|+||+|...+.+... +. ..+.++
T Consensus 152 ~~~~~~~~~---~~~~~------~~~~vi~n~~~~~~~~~~~~---------------------------~~--~~~~~~ 193 (359)
T cd03823 152 RFLLDRYVA---NGLFA------EKISVIRNGIDLDRAKRPRR---------------------------AP--PGGRLR 193 (359)
T ss_pred HHHHHHHHH---cCCCc------cceEEecCCcChhhcccccc---------------------------CC--CCCceE
Confidence 999999886 34322 28999999999987765421 11 135578
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCC
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPS 485 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS 485 (612)
|+|+||+.+.||++.+++++.++.+++++|+++|.+.......... ....++...+..+.+++..+++.||++++||
T Consensus 194 i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps 270 (359)
T cd03823 194 FGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPS 270 (359)
T ss_pred EEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcC
Confidence 9999999999999999999999976789999999987433222221 3345677777777888889999999999999
Q ss_pred C-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007224 486 R-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 564 (612)
Q Consensus 486 ~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~ 564 (612)
. .|++|++++|||+||+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.++++
T Consensus 271 ~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~~~~~~~ 338 (359)
T cd03823 271 IWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLF----------PPGDAEDLAAALERLIDD--PDLLERLRA 338 (359)
T ss_pred cccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEE----------CCCCHHHHHHHHHHHHhC--hHHHHHHHH
Confidence 8 699999999999999999999999999999999999988 999999999999999997 677777777
Q ss_pred HHHHhcCCcHHHHHHHHHHHH
Q 007224 565 NGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 565 ~~~~~~~sw~~~a~~~~~~y~ 585 (612)
++.. .++.+.++++++++|+
T Consensus 339 ~~~~-~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 339 GIEP-PRSIEDQAEEYLKLYR 358 (359)
T ss_pred hHHH-hhhHHHHHHHHHHHhh
Confidence 6643 3445999999999986
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=286.26 Aligned_cols=367 Identities=21% Similarity=0.238 Sum_probs=246.8
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..++|. .||.+.++..|+++|++.||+|+++++............ .....
T Consensus 1 kIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 56 (375)
T cd03821 1 KILHVIPSFDPK--YGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALN----------------------GVPVK 56 (375)
T ss_pred CeEEEcCCCCcc--cCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhcc----------------------Cceee
Confidence 799999988764 899999999999999999999999998643222110000 00000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecC-CccchHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND-WHTSLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~-~~~~~~~ 244 (612)
.......... .... ..+........... ..++| +||+|+ |......
T Consensus 57 ~~~~~~~~~~---------------------~~~~-~~~~~~~~~~~~~~----------~~~~d-ii~~~~~~~~~~~~ 103 (375)
T cd03821 57 LFSINVAYGL---------------------NLAR-YLFPPSLLAWLRLN----------IREAD-IVHVHGLWSYPSLA 103 (375)
T ss_pred ecccchhhhh---------------------hhhh-hccChhHHHHHHHh----------CCCCC-EEEEecccchHHHH
Confidence 0000000000 0000 00000111111111 12689 889987 3332222
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
....... .++|++++.|+......... ..+.. . .......+..+..++.++++
T Consensus 104 ~~~~~~~------~~~~~i~~~~~~~~~~~~~~---------~~~~~----------~--~~~~~~~~~~~~~~~~i~~~ 156 (375)
T cd03821 104 AARAARK------YGIPYVVSPHGMLDPWALPH---------KALKK----------R--LAWFLFERRLLQAAAAVHAT 156 (375)
T ss_pred HHHHHHH------hCCCEEEEcccccccccccc---------chhhh----------H--HHHHHHHHHHHhcCCEEEEC
Confidence 2211111 47899999996432111000 00000 0 00112234556789999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|......+.. +.. ..++.+||||+|.+.|.+... ... ++..+.+ ++.+
T Consensus 157 s~~~~~~~~~----~~~------~~~~~vi~~~~~~~~~~~~~~-------------------~~~-~~~~~~~--~~~~ 204 (375)
T cd03821 157 SEQEAAEIRR----LGL------KAPIAVIPNGVDIPPFAALPS-------------------RGR-RRKFPIL--PDKR 204 (375)
T ss_pred CHHHHHHHHh----hCC------cccEEEcCCCcChhccCcchh-------------------hhh-hhhccCC--CCCc
Confidence 9877777653 111 227999999999988866421 111 4445544 4568
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi 480 (612)
+|+|+||+.+.||++.+++++.++.+ ++++|+++|.+...+...++.+..+++ .++.+.+..+.+.+..+++.||+
T Consensus 205 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv 284 (375)
T cd03821 205 IILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADL 284 (375)
T ss_pred EEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCE
Confidence 99999999999999999999999977 699999999987666677776644443 46777777777788889999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
+++||..|+||++++|||+||+|||+++.+|..|++.+ .+|+++ +.+.++++++|.+++++ ++.+.
T Consensus 285 ~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~i~~l~~~--~~~~~ 350 (375)
T cd03821 285 FVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV-----------DDDVDALAAALRRALEL--PQRLK 350 (375)
T ss_pred EEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe-----------CCChHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999999999999999999999998 788875 45669999999999998 45555
Q ss_pred HHHHHH---HHhcCCcHHHHHHHHH
Q 007224 561 EMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 561 ~~~~~~---~~~~~sw~~~a~~~~~ 582 (612)
++++++ +.++|||+.++++|++
T Consensus 351 ~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 351 AMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 555544 5899999999998863
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=287.46 Aligned_cols=348 Identities=15% Similarity=0.116 Sum_probs=237.2
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+ + .||.+.++..++++|.++||+|+++++..... .+.. .....|+.++
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~--~~~~------------------~~~~~~~~~~ 56 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEG--DYDD------------------EIEKLGGKIY 56 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCc--chHH------------------HHHHcCCeEE
Confidence 799999875 3 79999999999999999999999999874321 0000 0011233333
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+... ..+... +...+.+.++. ++|| |||+|......+..
T Consensus 57 ~~~~~------------------------~~~~~~---~~~~~~~~~~~------------~~~D-vv~~~~~~~~~~~~ 96 (358)
T cd03812 57 YIPAR------------------------KKNPLK---YFKKLYKLIKK------------NKYD-IVHVHGSSASGFIL 96 (358)
T ss_pred EecCC------------------------CccHHH---HHHHHHHHHhc------------CCCC-EEEEeCcchhHHHH
Confidence 22110 001111 11222222222 3699 99999876555555
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
.+.... ....++++.|+..+...+... . .....+.+.....+|.++++|
T Consensus 97 ~~~~~~------~~~~~v~~~~~~~~~~~~~~~-----------------------~--~~~~~~~~~~~~~~~~~i~~s 145 (358)
T cd03812 97 LAAKKA------GVKVRIAHSHNTSDSHDKKKK-----------------------I--LKYKVLRKLINRLATDYLACS 145 (358)
T ss_pred HHHhhC------CCCeEEEEeccccccccccch-----------------------h--hHHHHHHHHHHhcCCEEEEcC
Confidence 544432 233456778864432111000 0 000123455667899999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+... .. ..++.+||||+|.+.|.+.... ++. +.+.+.. .+.++
T Consensus 146 ~~~~~~~~~~----~~------~~~~~vi~ngvd~~~~~~~~~~------------------~~~-~~~~~~~--~~~~~ 194 (358)
T cd03812 146 EEAGKWLFGK----VK------NKKFKVIPNGIDLEKFIFNEEI------------------RKK-RRELGIL--EDKFV 194 (358)
T ss_pred HHHHHHHHhC----CC------cccEEEEeccCcHHHcCCCchh------------------hhH-HHHcCCC--CCCEE
Confidence 9999988751 22 2389999999999887654211 111 3444443 35689
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
|+|+||+.++||++.+++++..+.+ ++++++|+|+|+ ..+.+++..++++ +++.+.+. .+.+..+|+.||++
T Consensus 195 i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~ 270 (358)
T cd03812 195 IGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE--LEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVF 270 (358)
T ss_pred EEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEE
Confidence 9999999999999999999999975 699999999988 4556666665543 45655554 44566799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
|+||+.|+||++++|||++|+|||+|+.||..|++.++ .|++. .++++++++++|.+++++ ++..+.
T Consensus 271 v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~-~~~~~----------~~~~~~~~a~~i~~l~~~--~~~~~~ 337 (358)
T cd03812 271 LFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDL-VKFLS----------LDESPEIWAEEILKLKSE--DRRERS 337 (358)
T ss_pred EecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccC-ccEEe----------CCCCHHHHHHHHHHHHhC--cchhhh
Confidence 99999999999999999999999999999999999984 55554 667899999999999998 556666
Q ss_pred HHHHHHHhcCCcHHH
Q 007224 562 MMKNGMAQDLSWKGP 576 (612)
Q Consensus 562 ~~~~~~~~~~sw~~~ 576 (612)
+..++..+.-+++..
T Consensus 338 ~~~~~~~~~~~~~~~ 352 (358)
T cd03812 338 SESIKKKGLDADDEA 352 (358)
T ss_pred hhhhhhccchhhhhh
Confidence 666655444444443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=282.71 Aligned_cols=341 Identities=20% Similarity=0.222 Sum_probs=247.7
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+|++..|+| |.+.++..++.+|.++||+|++++..........+. .. ..+...
T Consensus 1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~-----------------~~--~~~~~~- 55 (355)
T cd03799 1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHPE-----------------DR--AELART- 55 (355)
T ss_pred CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCccccccccc-----------------cc--ccccch-
Confidence 79999988633 377899999999999999999999874322111000 00 000000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
. |......+..+...+...++. .++| +||+|.+.......
T Consensus 56 -----~----------------------~~~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~~~ 95 (355)
T cd03799 56 -----R----------------------YLARSLALLAQALVLARELRR------------LGID-HIHAHFGTTPATVA 95 (355)
T ss_pred -----H----------------------HHHHHHHHHHHHHHHHHHHHh------------cCCC-EEEECCCCchHHHH
Confidence 0 000111111122222222222 2699 99999765555444
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
.+.... .+.|+++++|+...... ....+++..+..+|.++++|
T Consensus 96 ~~~~~~------~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~vi~~s 138 (355)
T cd03799 96 MLASRL------GGIPYSFTAHGKDIFRS-------------------------------PDAIDLDEKLARADFVVAIS 138 (355)
T ss_pred HHHHHh------cCCCEEEEEeccccccc-------------------------------CchHHHHHHHhhCCEEEECC
Confidence 444432 47899999995332100 00135667788999999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+. ++.... ++.+|+||+|.+.+.+... . ...+.+.
T Consensus 139 ~~~~~~l~~~--~~~~~~------~~~vi~~~~d~~~~~~~~~---------------------------~--~~~~~~~ 181 (355)
T cd03799 139 EYNRQQLIRL--LGCDPD------KIHVVHCGVDLERFPPRPP---------------------------P--PPGEPLR 181 (355)
T ss_pred HHHHHHHHHh--cCCCcc------cEEEEeCCcCHHHcCCccc---------------------------c--ccCCCeE
Confidence 9999999862 244433 8999999999887765420 0 1124578
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhcCEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
|+|+|++.+.||++.+++++.++.+ ++++|+++|.++ ....++++..++ +.++...+..+.+++..+++.||++
T Consensus 182 i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~ 259 (355)
T cd03799 182 ILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGP--LRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLF 259 (355)
T ss_pred EEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCc--cHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEE
Confidence 9999999999999999999999876 589999999987 345566665554 3457777777778888999999999
Q ss_pred EeCCCC------CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC
Q 007224 482 LIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 482 l~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 555 (612)
++||.. |+||++++|||++|+|+|+++.|+..|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 260 l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~-- 327 (355)
T cd03799 260 VLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLV----------PPGDPEALADAIERLLDD-- 327 (355)
T ss_pred EecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEe----------CCCCHHHHHHHHHHHHhC--
Confidence 999999 99999999999999999999999999999999999987 888999999999999998
Q ss_pred HHHHHHHHHHH---HHhcCCcHHHHHH
Q 007224 556 TQALAEMMKNG---MAQDLSWKGPAKK 579 (612)
Q Consensus 556 ~~~~~~~~~~~---~~~~~sw~~~a~~ 579 (612)
++.+.++++++ +.++|||+..+++
T Consensus 328 ~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 328 PELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 55566666655 5689999998875
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-33 Score=304.09 Aligned_cols=286 Identities=18% Similarity=0.229 Sum_probs=216.1
Q ss_pred CCcEEEEecCCc-cchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWH-TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~-~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
++| |+|+|+.. .++++.+++.. .++|++++.|++....+.. ++....+.. ...+..+.+
T Consensus 173 ~~d-viH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~~~e~~~--~~~~~~~~~----------~~~~~~~~~ 232 (475)
T cd03813 173 KAD-VYHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIYTRERKI--ELLQADWEM----------SYFRRLWIR 232 (475)
T ss_pred CCC-EEeccCcchHHHHHHHHHHH-------hCCCEEEecCCccHHHHHH--HHHhcccch----------HHHHHHHHH
Confidence 689 99999643 33444555544 5899999999754321110 000000000 000000001
Q ss_pred -chhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchH
Q 007224 307 -KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 307 -~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
...+.+..++.||.|+++|+..++.+.. +|.+.+ ++.+||||+|.+.|.+....
T Consensus 233 ~~~~l~~~~~~~ad~Ii~~s~~~~~~~~~---~g~~~~------ki~vIpNgid~~~f~~~~~~---------------- 287 (475)
T cd03813 233 FFESLGRLAYQAADRITTLYEGNRERQIE---DGADPE------KIRVIPNGIDPERFAPARRA---------------- 287 (475)
T ss_pred HHHHHHHHHHHhCCEEEecCHHHHHHHHH---cCCCHH------HeEEeCCCcCHHHcCCcccc----------------
Confidence 1233466778999999999999887765 676655 89999999999988765310
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCc--hhHHHHHHHHHHHCC--Cc
Q 007224 386 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK--KPMEKQLEQLEILYP--EK 459 (612)
Q Consensus 386 ~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~--~~~~~~l~~l~~~~~--~~ 459 (612)
. ..++.++|+|+||+.+.||++.+++|+..+.+ ++++|+|+|.++ +.+.+.++++.++++ ++
T Consensus 288 ----------~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~ 355 (475)
T cd03813 288 ----------R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDN 355 (475)
T ss_pred ----------c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCe
Confidence 0 12355899999999999999999999999875 799999999984 457788888887765 45
Q ss_pred eEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec------CceEEEecccccccC
Q 007224 460 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCE 533 (612)
Q Consensus 460 i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------g~~G~l~~~~~~~~~ 533 (612)
+.+.+ .+.+..+|+.+|++++||..|+||++++|||+||+|||+|+.||+.|++.+ |.+|+++
T Consensus 356 V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv-------- 424 (475)
T cd03813 356 VKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV-------- 424 (475)
T ss_pred EEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE--------
Confidence 66655 344567999999999999999999999999999999999999999999998 6799987
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHH
Q 007224 534 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 534 ~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~ 585 (612)
++.|+++++++|.+++++ ++.+.++++++ +.+.|+|+.++++|+++|+
T Consensus 425 --~~~d~~~la~ai~~ll~~--~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 425 --PPADPEALARAILRLLKD--PELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred --CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999998 56666666655 5788999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=283.75 Aligned_cols=382 Identities=20% Similarity=0.213 Sum_probs=258.3
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..++|. .||.+.++..++++|+++||+|+++++............ ......++++++
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 63 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG---------------YKREEVDGVRVH 63 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc---------------ceEEecCCeEEE
Confidence 799999998885 499999999999999999999999998633221110000 111223456665
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCc-cchHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~-~~~~~ 244 (612)
.+........ . +......+..+.......+... ..+|| +||+|.+. ....+
T Consensus 64 ~~~~~~~~~~--------~---------~~~~~~~~~~~~~~~~~~~~~~----------~~~~D-~v~~~~~~~~~~~~ 115 (394)
T cd03794 64 RVPLPPYKKN--------G---------LLKRLLNYLSFALSALLALLKR----------RRRPD-VIIATSPPLLIALA 115 (394)
T ss_pred EEecCCCCcc--------c---------hHHHHHhhhHHHHHHHHHHHhc----------ccCCC-EEEEcCChHHHHHH
Confidence 5532211110 0 1111122222333333322211 12699 88888622 22222
Q ss_pred -HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEe
Q 007224 245 -CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 245 -~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 323 (612)
..++.. .++|+++++|+........ ....... .........+.+..+..+|.+++
T Consensus 116 ~~~~~~~-------~~~~~i~~~h~~~~~~~~~-----~~~~~~~------------~~~~~~~~~~~~~~~~~~d~vi~ 171 (394)
T cd03794 116 ALLLARL-------KGAPFVLEVRDLWPESAVA-----LGLLKNG------------SLLYRLLRKLERLIYRRADAIVV 171 (394)
T ss_pred HHHHHHh-------cCCCEEEEehhhcchhHHH-----ccCcccc------------chHHHHHHHHHHHHHhcCCEEEE
Confidence 222222 4889999999754311100 0000000 00001223445667889999999
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~ 403 (612)
+|+..++.+.. ++.+.. ++.++|||+|...+.+.... .. +.+... .++.
T Consensus 172 ~s~~~~~~~~~---~~~~~~------~~~~i~~~~~~~~~~~~~~~-------------------~~-~~~~~~--~~~~ 220 (394)
T cd03794 172 ISPGMREYLVR---RGVPPE------KISVIPNGVDLELFKPPPAD-------------------ES-LRKELG--LDDK 220 (394)
T ss_pred ECHHHHHHHHh---cCCCcC------ceEEcCCCCCHHHcCCccch-------------------hh-hhhccC--CCCc
Confidence 99999999873 344333 89999999998877664321 00 222222 2356
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHC-CCceEEEeccChHHHHHHHHhcCEE
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~-~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
++|+|+|++.++||++.+++++.++.+ ++++|+++|.|. ....++++.... ..++...+..+.+.+..+++.||++
T Consensus 221 ~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~ 298 (394)
T cd03794 221 FVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGP--EKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVG 298 (394)
T ss_pred EEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcc--cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCee
Confidence 899999999999999999999999976 489999999987 344455543332 2457777767778888999999999
Q ss_pred EeCCCCCCC-----cHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH
Q 007224 482 LIPSRFEPC-----GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 482 l~pS~~E~~-----gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~ 556 (612)
++||..|++ |++++|||+||+|||+++.++..+++.++.+|+++ ++.|+++++++|.+++.+ +
T Consensus 299 i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~ 366 (394)
T cd03794 299 LVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVV----------PPGDPEALAAAILELLDD--P 366 (394)
T ss_pred EEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEe----------CCCCHHHHHHHHHHHHhC--h
Confidence 999998875 88899999999999999999999999998999987 889999999999999987 5
Q ss_pred HHHHHHHHHH---HHhcCCcHHHHHHHH
Q 007224 557 QALAEMMKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 557 ~~~~~~~~~~---~~~~~sw~~~a~~~~ 581 (612)
+.+.++++++ ..++|||+.++++|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 367 EERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 6666666655 467999999998873
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-31 Score=276.81 Aligned_cols=367 Identities=27% Similarity=0.382 Sum_probs=261.8
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..++|. .||.+.++..|+++|.+.||+|.++++........... ......
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV----------------------GGIVVV 56 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee----------------------cCccee
Confidence 799999987775 79999999999999999999999999874432221000 000000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.. .. ... . ........+.......++. .++| +||+|.+.......
T Consensus 57 ~~--~~-~~~---------~----------~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~~~ 101 (374)
T cd03801 57 RP--PP-LLR---------V----------RRLLLLLLLALRLRRLLRR------------ERFD-VVHAHDWLALLAAA 101 (374)
T ss_pred cC--Cc-ccc---------c----------chhHHHHHHHHHHHHHhhh------------cCCc-EEEEechhHHHHHH
Confidence 00 00 000 0 0000111122222222222 2699 89998877666554
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
.+... .++|+++++|+..+...... . .........+.+..+..+|.++++|
T Consensus 102 ~~~~~-------~~~~~i~~~h~~~~~~~~~~---------~-------------~~~~~~~~~~~~~~~~~~d~~i~~s 152 (374)
T cd03801 102 LAARL-------LGIPLVLTVHGLEFGRPGNE---------L-------------GLLLKLARALERRALRRADRIIAVS 152 (374)
T ss_pred HHHHh-------cCCcEEEEeccchhhccccc---------h-------------hHHHHHHHHHHHHHHHhCCEEEEec
Confidence 33322 58999999997654221110 0 0001122345566788999999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+. ++.+.+ ++.++|||+|...+.+.. ...+.....+ ++.+.
T Consensus 153 ~~~~~~~~~~--~~~~~~------~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~--~~~~~ 201 (374)
T cd03801 153 EATREELREL--GGVPPE------KITVIPNGVDTERFRPAP---------------------RAARRRLGIP--EDEPV 201 (374)
T ss_pred HHHHHHHHhc--CCCCCC------cEEEecCcccccccCccc---------------------hHHHhhcCCc--CCCeE
Confidence 9999999862 333222 799999999988776531 1112222222 35579
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHH--CCCceEEEeccChHHHHHHHHhcCEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
|+|+|++.+.||++.+++++..+.+ ++++|+++|.+. ....++++..+ .+.++...+..+.+++..+++.||++
T Consensus 202 i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~ 279 (374)
T cd03801 202 ILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP--LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVF 279 (374)
T ss_pred EEEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH--HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEE
Confidence 9999999999999999999999876 589999999776 45556655433 33567777777778888999999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
++|+..|++|++++|||++|+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.+
T Consensus 280 i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~~ 347 (374)
T cd03801 280 VLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLV----------PPGDPEALAEAILRLLDD--PELRRR 347 (374)
T ss_pred EecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEe----------CCCCHHHHHHHHHHHHcC--hHHHHH
Confidence 99999999999999999999999999999999999999999987 898999999999999998 666666
Q ss_pred HHHHH---HHhcCCcHHHHHHHHHHHH
Q 007224 562 MMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 562 ~~~~~---~~~~~sw~~~a~~~~~~y~ 585 (612)
+++++ ..+.|+|+.+++++.++|+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 348 LGEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 66665 4799999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-31 Score=279.70 Aligned_cols=365 Identities=23% Similarity=0.289 Sum_probs=252.9
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..|+|. .||.+..+..++++|+++||+|+++++........... .++...
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV----------------------VVVRPF 56 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc----------------------cccccc
Confidence 799999998886 89999999999999999999999999875433221000 000000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCc-cchHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~-~~~~~ 244 (612)
..... ...+ .. .. ..+...+.+.++. ++|| +||+|... .+...
T Consensus 57 ~~~~~-~~~~---------~~------------~~-~~~~~~~~~~~~~------------~~~D-iv~~~~~~~~~~~~ 100 (374)
T cd03817 57 RVPTF-KYPD---------FR------------LP-LPIPRALIIILKE------------LGPD-IVHTHTPFSLGLLG 100 (374)
T ss_pred ccccc-hhhh---------hh------------cc-ccHHHHHHHHHhh------------cCCC-EEEECCchhhhhHH
Confidence 00000 0000 00 00 0111122222222 2699 88888632 23333
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcch-hHHHHHHHhcCEEEe
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLT 323 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~ad~vi~ 323 (612)
..+... .++|+++++|+... . + .......... ...... .+++..+..+|.+++
T Consensus 101 ~~~~~~-------~~~~~i~~~~~~~~-~-~----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~d~i~~ 154 (374)
T cd03817 101 LRVARK-------LGIPVVATYHTMYE-D-Y----THYVPLGRLL-------------ARAVVRRKLSRRFYNRCDAVIA 154 (374)
T ss_pred HHHHHH-------cCCCEEEEecCCHH-H-H----HHHHhcccch-------------hHHHHHHHHHHHHhhhCCEEEe
Confidence 333332 58899999996432 0 0 0000000000 000111 456777889999999
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~ 403 (612)
+|+..++.+.. ++.. .++.++|||+|...+.+.. ....+++.+++ ++.
T Consensus 155 ~s~~~~~~~~~---~~~~-------~~~~vi~~~~~~~~~~~~~--------------------~~~~~~~~~~~--~~~ 202 (374)
T cd03817 155 PSEKIADLLRE---YGVK-------RPIEVIPTGIDLDRFEPVD--------------------GDDERRKLGIP--EDE 202 (374)
T ss_pred ccHHHHHHHHh---cCCC-------CceEEcCCccchhccCccc--------------------hhHHHHhcCCC--CCC
Confidence 99999988875 4432 2589999999998876542 12224555554 355
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcC
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~ad 479 (612)
+.|+|+|++.+.||++.+++++.++.+ ++++|+++|.++ ..+.++++..+++ .++...+..+.+.+..+++.||
T Consensus 203 ~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 280 (374)
T cd03817 203 PVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--EREELEELARELGLADRVIFTGFVPREELPDYYKAAD 280 (374)
T ss_pred eEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcC
Confidence 899999999999999999999999876 789999999987 4566666665443 4677777778888889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~ 559 (612)
++++||..|++|++++|||+||+|||+++.|+..|++.++.+|+++ ++.|. +++++|.+++++ ++.+
T Consensus 281 ~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~-~~~~~i~~l~~~--~~~~ 347 (374)
T cd03817 281 LFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLF----------PPGDE-ALAEALLRLLQD--PELR 347 (374)
T ss_pred EEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEe----------CCCCH-HHHHHHHHHHhC--hHHH
Confidence 9999999999999999999999999999999999999999999988 77777 999999999998 5556
Q ss_pred HHHHHHHH--HhcCCcHHHHHHHHHHHHH
Q 007224 560 AEMMKNGM--AQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 560 ~~~~~~~~--~~~~sw~~~a~~~~~~y~~ 586 (612)
.+|++++. .++++ .+++++++|++
T Consensus 348 ~~~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 348 RRLSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 67776663 33444 67778887765
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=287.38 Aligned_cols=278 Identities=12% Similarity=0.124 Sum_probs=201.5
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEE-EecCcccccCCcccccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC-IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~-iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+|| |||+|...+.+.+.+.... .++|++++ .|. .+... ..+
T Consensus 280 rpD-IVHt~~~~a~l~g~laA~l-------agvpviv~~~h~-~~~~~-----------------------------~~r 321 (578)
T PRK15490 280 KLD-YLSVWQDGACLMIALAALI-------AGVPRIQLGLRG-LPPVV-----------------------------RKR 321 (578)
T ss_pred CCC-EEEEcCcccHHHHHHHHHh-------cCCCEEEEeecc-cCCcc-----------------------------hhh
Confidence 799 9999986666666555554 47888655 553 11000 001
Q ss_pred chhHHHHHHH-------hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcch
Q 007224 307 KINWMKAGIL-------ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 307 ~~~~~k~~~~-------~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
...+....+. .+| ++++|...++.+.+ .++++.+ ++.+||||+|+..|.|..+.
T Consensus 322 ~~~~e~~~~~~a~~i~~~sd-~v~~s~~v~~~l~~--~lgip~~------KI~VIyNGVD~~rf~p~~~~---------- 382 (578)
T PRK15490 322 LFKPEYEPLYQALAVVPGVD-FMSNNHCVTRHYAD--WLKLEAK------HFQVVYNGVLPPSTEPSSEV---------- 382 (578)
T ss_pred HHHHHHHHhhhhceeEecch-hhhccHHHHHHHHH--HhCCCHH------HEEEEeCCcchhhcCccchh----------
Confidence 1111112222 334 66788888888765 2566655 89999999999988775321
Q ss_pred hhcchHHHHHHHHHH--hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHH
Q 007224 380 VMDAKPLLKEALQAE--VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL 455 (612)
Q Consensus 380 ~~~~~~~~k~~l~~~--~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~ 455 (612)
....++. .+++ ++.++|+++||+.++||++.+++++.++.+ ++++|+|+|+|+ .++.++++..+
T Consensus 383 --------~~~~r~~~~~~l~--~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~--~~eeLk~la~e 450 (578)
T PRK15490 383 --------PHKIWQQFTQKTQ--DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD--LRAEAQKRAEQ 450 (578)
T ss_pred --------hHHHHHHhhhccC--CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch--hHHHHHHHHHH
Confidence 1112222 2343 344799999999999999999999988755 789999999997 56778888777
Q ss_pred CC--CceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccC
Q 007224 456 YP--EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 533 (612)
Q Consensus 456 ~~--~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~ 533 (612)
++ +++.+.+. .+.+..+|+.+|++|+||.+|+||++++|||+||+|||+|+.||..|+|.++.+|+++
T Consensus 451 lgL~d~V~FlG~--~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LV-------- 520 (578)
T PRK15490 451 LGILERILFVGA--SRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFIL-------- 520 (578)
T ss_pred cCCCCcEEECCC--hhhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEE--------
Confidence 65 44555543 3456679999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCHHHHHHHHHH---HHHhhC-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 007224 534 AVDPVDVAAVSTTVRR---ALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 534 ~v~~~d~~~la~~l~~---ll~~~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~ 586 (612)
++.|++++++++.. +.+... ...+.+.+++.+.++|||+.++++|+++|.+
T Consensus 521 --p~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 521 --DDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred --CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 88898888887633 333311 1223344445567999999999999999975
|
|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-31 Score=279.82 Aligned_cols=351 Identities=21% Similarity=0.259 Sum_probs=239.8
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+||+.. .|. .||.++++..|+++|+++||+|++++........ ..... ..+....
T Consensus 1 kI~~v~~~-~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~--~~~~~------------------~~~~~~~ 57 (366)
T cd03822 1 RIALVSPY-PPR--KCGIATFTTDLVNALSARGPDVLVVSVAALYPSL--LYGGE------------------QEVVRVI 57 (366)
T ss_pred CeEEecCC-CCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcc--cCCCc------------------ccceeee
Confidence 79999875 554 7999999999999999999999999876321111 00000 0000000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH-
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP- 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~- 244 (612)
.. + +...+ ..+.+.++. .+|| +||+|.|...+.+
T Consensus 58 ~~------------------~----------~~~~~----~~~~~~~~~------------~~~d-ii~~~~~~~~~~~~ 92 (366)
T cd03822 58 VL------------------D----------NPLDY----RRAARAIRL------------SGPD-VVVIQHEYGIFGGE 92 (366)
T ss_pred ec------------------C----------CchhH----HHHHHHHhh------------cCCC-EEEEeeccccccch
Confidence 00 0 00001 112222222 2699 8888875543222
Q ss_pred --HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEE
Q 007224 245 --CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 245 --~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 322 (612)
..+....+ ..++|+++++|+...... ......+++..+..+|.++
T Consensus 93 ~~~~~~~~~~----~~~~~~i~~~h~~~~~~~-----------------------------~~~~~~~~~~~~~~~d~ii 139 (366)
T cd03822 93 AGLYLLLLLR----GLGIPVVVTLHTVLLHEP-----------------------------RPGDRALLRLLLRRADAVI 139 (366)
T ss_pred hhHHHHHHHh----hcCCCEEEEEecCCcccc-----------------------------chhhhHHHHHHHhcCCEEE
Confidence 22222111 158899999997511000 0012345566788999999
Q ss_pred ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCC
Q 007224 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~ 402 (612)
++|....+.+... .+ ..++.+|+||+|...+.+.. .. ++...+ .+
T Consensus 140 ~~s~~~~~~~~~~--~~--------~~~~~~i~~~~~~~~~~~~~---------------------~~--~~~~~~--~~ 184 (366)
T cd03822 140 VMSSELLRALLLR--AY--------PEKIAVIPHGVPDPPAEPPE---------------------SL--KALGGL--DG 184 (366)
T ss_pred EeeHHHHHHHHhh--cC--------CCcEEEeCCCCcCcccCCch---------------------hh--HhhcCC--CC
Confidence 9974444444321 11 12899999999977665431 00 222222 35
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHH---HHHHH--CCCceEEEec-cChHHHHHH
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLE---QLEIL--YPEKARGVAK-FNIPLAHMI 474 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~---~l~~~--~~~~i~~~~~-~~~~~~~~~ 474 (612)
.++|+|+||+.++||++.+++++.++.+ ++++|+|+|.+......... ++..+ ...++.+.+. .+.+++..+
T Consensus 185 ~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~ 264 (366)
T cd03822 185 RPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPEL 264 (366)
T ss_pred CeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHH
Confidence 6899999999999999999999999976 68999999998643322211 11222 3346777777 567788889
Q ss_pred HHhcCEEEeCCCCC--CCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 475 IAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 475 l~~adi~l~pS~~E--~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
++.||++++||.+| ++|++++|||+||+|||+++.|+ .+.+.++.+|+++ ++.|+++++++|.++++
T Consensus 265 ~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~----------~~~d~~~~~~~l~~l~~ 333 (366)
T cd03822 265 FSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLV----------PPGDPAALAEAIRRLLA 333 (366)
T ss_pred HhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEE----------cCCCHHHHHHHHHHHHc
Confidence 99999999999999 99999999999999999999999 7878888899987 89999999999999999
Q ss_pred hhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 553 ~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~ 585 (612)
+ ++.+.+|++++. .+.|||+.++++|.++|+
T Consensus 334 ~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 334 D--PELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred C--hHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 8 566666766662 345999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=284.43 Aligned_cols=229 Identities=14% Similarity=0.105 Sum_probs=181.2
Q ss_pred HHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHH
Q 007224 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l 391 (612)
+.....+|.|+++|++.++.+.+. ++.+ .++.+++||+|...+...+.
T Consensus 215 ~~~~~~ad~ii~nS~~t~~~l~~~--~~~~-------~~i~vvyp~vd~~~~~~~~~----------------------- 262 (463)
T PLN02949 215 GLVGRCAHLAMVNSSWTKSHIEAL--WRIP-------ERIKRVYPPCDTSGLQALPL----------------------- 262 (463)
T ss_pred HHHcCCCCEEEECCHHHHHHHHHH--cCCC-------CCeEEEcCCCCHHHcccCCc-----------------------
Confidence 344578999999999999998752 2321 26889999999765532110
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCc----hhHHHHHHHHHHHCC--Cc
Q 007224 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILYP--EK 459 (612)
Q Consensus 392 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~~--~~ 459 (612)
...++.+.++++||++++||++.+++|+.++.+ ++++|+|+|++. ..+.+++++++.+++ ++
T Consensus 263 ------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 263 ------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred ------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCc
Confidence 011234789999999999999999999998643 589999999874 234567888887764 56
Q ss_pred eEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc-cceec---CceEEEecccccccCCC
Q 007224 460 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 460 i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~v~~---g~~G~l~~~~~~~~~~v 535 (612)
+.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|||+++.||.. |++.+ +.+|+++
T Consensus 337 V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~---------- 406 (463)
T PLN02949 337 VEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA---------- 406 (463)
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC----------
Confidence 888877788888899999999999999999999999999999999999999875 77765 6789964
Q ss_pred CCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHHHcC
Q 007224 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 536 ~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~~~~ 591 (612)
.|+++++++|.+++++ .++.+.+|++++. .++|||+.++++|+++|++++...
T Consensus 407 --~~~~~la~ai~~ll~~-~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~~ 461 (463)
T PLN02949 407 --TTVEEYADAILEVLRM-RETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNSA 461 (463)
T ss_pred --CCHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhh
Confidence 4999999999999985 2444555655552 467999999999999999987543
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=281.55 Aligned_cols=360 Identities=19% Similarity=0.207 Sum_probs=251.3
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+.|. ..||+++++.+|+++|+++||+|+++++............ .....
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~---------------------~~~~~- 57 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLR---------------------AALRL- 57 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccch---------------------hcccc-
Confidence 689999888772 4899999999999999999999999998754332211000 00000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
..... . ......+............. .++| +||+|.+.....
T Consensus 58 -~~~~~-~---------------------~~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~-- 99 (365)
T cd03809 58 -LLRLP-R---------------------RLLWGLLFLLRAGDRLLLLL------------LGLD-LLHSPHNTAPLL-- 99 (365)
T ss_pred -ccccc-c---------------------ccccchhhHHHHHHHHHhhh------------cCCC-eeeecccccCcc--
Confidence 00000 0 00000111111111111111 2699 899987665544
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
+ ..++|+++++|+..+... + ..... ........+++..+..+|.++++|
T Consensus 100 --~--------~~~~~~i~~~hd~~~~~~-~----------~~~~~----------~~~~~~~~~~~~~~~~~d~~i~~s 148 (365)
T cd03809 100 --R--------LRGVPVVVTIHDLIPLRF-P----------EYFSP----------GFRRYFRRLLRRALRRADAIITVS 148 (365)
T ss_pred --c--------CCCCCEEEEeccchhhhC-c----------ccCCH----------HHHHHHHHHHHHHHHHcCEEEEcc
Confidence 1 168999999997543111 0 00000 001123355677888999999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+. ++.+.. ++.+++||+|...+.+... .. +...... .+.++
T Consensus 149 ~~~~~~~~~~--~~~~~~------~~~vi~~~~~~~~~~~~~~-------------------~~--~~~~~~~--~~~~~ 197 (365)
T cd03809 149 EATKRDLLRY--LGVPPD------KIVVIPLGVDPRFRPPPAE-------------------AE--VLRALYL--LPRPY 197 (365)
T ss_pred HHHHHHHHHH--hCcCHH------HEEeeccccCccccCCCch-------------------HH--HHHHhcC--CCCCe
Confidence 9999999862 443333 7999999999888765431 11 2222222 35579
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccC--CcEEEEEeCCchhHHHHHHHHH-HHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLE-ILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~-~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
|+|+||+.+.||++.+++++.++.+. +++|+++|.+........+.+. .....++...+..+.+.+..+++.||+++
T Consensus 198 i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 198 FLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred EEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhc
Confidence 99999999999999999999999773 6999999987644444333321 12345677777778888889999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 562 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~ 562 (612)
+||.+|++|++++|||++|+|||+++.|++.|++.+ +|+++ ++.|+++++++|.+++.+ ++.+.++
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~--~~~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~ 343 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD--AALYF----------DPLDPEALAAAIERLLED--PALREEL 343 (365)
T ss_pred ccchhccCCCCHHHHhcCCCcEEecCCCCccceecC--ceeee----------CCCCHHHHHHHHHHHhcC--HHHHHHH
Confidence 999999999999999999999999999999999854 57766 888999999999999987 6667777
Q ss_pred HHHH--HHhcCCcHHHHHHHHH
Q 007224 563 MKNG--MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 563 ~~~~--~~~~~sw~~~a~~~~~ 582 (612)
++++ ..++|||+..++++++
T Consensus 344 ~~~~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 344 RERGLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHHHHHHhCCHHHHHHHHhC
Confidence 7666 4688999999998863
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-30 Score=271.66 Aligned_cols=372 Identities=23% Similarity=0.311 Sum_probs=257.8
Q ss_pred EEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEEE
Q 007224 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (612)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (612)
|++++..++| ...||.+.++..++.+|.+.||+|+++++.............. . ........
T Consensus 1 iLii~~~~p~-~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~------------~-----~~~~~~~~ 62 (377)
T cd03798 1 ILVISSLYPP-PNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGR------------L-----VGVERLPV 62 (377)
T ss_pred CeEeccCCCC-CCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccc------------c-----cccccccc
Confidence 5788887655 2359999999999999999999999999863322221000000 0 00000000
Q ss_pred EeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCc-cchHHH
Q 007224 167 VDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIPC 245 (612)
Q Consensus 167 l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~-~~~~~~ 245 (612)
...... ..........+...+...++.. .+++| +||+|... ..++..
T Consensus 63 ---~~~~~~------------------~~~~~~~~~~~~~~~~~~l~~~----------~~~~d-ii~~~~~~~~~~~~~ 110 (377)
T cd03798 63 ---LLPVVP------------------LLKGPLLYLLAARALLKLLKLK----------RFRPD-LIHAHFAYPDGFAAA 110 (377)
T ss_pred ---Ccchhh------------------ccccchhHHHHHHHHHHHHhcc----------cCCCC-EEEEeccchHHHHHH
Confidence 000000 0011112223334444444311 23799 78877433 233333
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
.+... .++|+++++|+........ .......++..+..+|.++++|
T Consensus 111 ~~~~~-------~~~~~i~~~h~~~~~~~~~---------------------------~~~~~~~~~~~~~~~d~ii~~s 156 (377)
T cd03798 111 LLKRK-------LGIPLVVTLHGSDVNLLPR---------------------------KRLLRALLRRALRRADAVIAVS 156 (377)
T ss_pred HHHHh-------cCCCEEEEeecchhcccCc---------------------------hhhHHHHHHHHHhcCCeEEeCC
Confidence 33332 4689999999755411100 0012455677788999999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+ .+.+ ..++.+++||+|...+.+.... .. .+.+.. .+.+.
T Consensus 157 ~~~~~~~~~---~~~~------~~~~~~i~~~~~~~~~~~~~~~------------------~~---~~~~~~--~~~~~ 204 (377)
T cd03798 157 EALADELKA---LGID------PEKVTVIPNGVDTERFSPADRA------------------EA---RKLGLP--EDKKV 204 (377)
T ss_pred HHHHHHHHH---hcCC------CCceEEcCCCcCcccCCCcchH------------------HH---HhccCC--CCceE
Confidence 999999886 2222 2389999999999888765321 00 222322 35589
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhcCEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
++++|++.+.||++.+++++..+.+ ++++++++|.+. ..+.++++.++. ..++...+..+.+++..+++.||++
T Consensus 205 i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~ 282 (377)
T cd03798 205 ILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP--LREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVF 282 (377)
T ss_pred EEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc--chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCee
Confidence 9999999999999999999999976 589999999987 344555555433 3457777777888888999999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
++||..|++|++++|||++|+|+|+++.++..|++.++.+|+++ ++.|+++++++|.+++++... .+..
T Consensus 283 i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~~~-~~~~ 351 (377)
T cd03798 283 VLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLV----------PPGDPEALAEAILRLLADPWL-RLGR 351 (377)
T ss_pred ecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEE----------CCCCHHHHHHHHHHHhcCcHH-HHhH
Confidence 99999999999999999999999999999999999999999987 999999999999999998433 3333
Q ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHH
Q 007224 562 MMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 562 ~~~~~~~~~~sw~~~a~~~~~~y~~l 587 (612)
...+...+.|+|+..++++.++|+++
T Consensus 352 ~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 352 AARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 34444679999999999999999764
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-30 Score=281.34 Aligned_cols=370 Identities=14% Similarity=0.072 Sum_probs=237.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
.+|++++.. .+|....+..++.+|+++||+|++++...+...+. .....|+.+
T Consensus 4 ~~~~~~~~~------~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~---------------------~~~~~~v~~ 56 (415)
T cd03816 4 KRVCVLVLG------DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDE---------------------ILSNPNITI 56 (415)
T ss_pred cEEEEEEec------ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHH---------------------HhcCCCEEE
Confidence 467777753 46666777889999999999999999763211110 011245666
Q ss_pred EEEeChh-hhhhhhcCCCCCcccCCCCCCCCcchhHHH-HHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCcc--
Q 007224 165 VFVDHPW-FLAKVVWGKTQSKIYGPRTGEDYQDNQLRF-SLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-- 240 (612)
Q Consensus 165 ~~l~~~~-~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~-- 240 (612)
+.+..+. ... ......++ .........+++.+.. ..+|| +||+|....
T Consensus 57 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~D-vi~~~~~~~~~ 108 (415)
T cd03816 57 HPLPPPPQRLN-------------------KLPFLLFAPLKVLWQFFSLLWLLYK--------LRPAD-YILIQNPPSIP 108 (415)
T ss_pred EECCCCccccc-------------------cchHHHHHHHHHHHHHHHHHHHHHh--------cCCCC-EEEEeCCCCch
Confidence 5553221 000 00111111 1111122222221110 12699 888886332
Q ss_pred -chHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcC
Q 007224 241 -SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 319 (612)
Q Consensus 241 -~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad 319 (612)
..++.+++.. .++|+|+++|+..+.. . ..+... ..+.......+.+..++.+|
T Consensus 109 ~~~~a~~~~~~-------~~~~~V~~~h~~~~~~-~------~~~~~~------------~~~~~~~~~~~e~~~~~~ad 162 (415)
T cd03816 109 TLLIAWLYCLL-------RRTKLIIDWHNYGYTI-L------ALKLGE------------NHPLVRLAKWYEKLFGRLAD 162 (415)
T ss_pred HHHHHHHHHHH-------hCCeEEEEcCCchHHH-H------hcccCC------------CCHHHHHHHHHHHHHhhcCC
Confidence 2223333433 4789999999753210 0 000000 00000111223345567899
Q ss_pred EEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHH------
Q 007224 320 MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA------ 393 (612)
Q Consensus 320 ~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~------ 393 (612)
.|+++|+..++.+.+ +|.+.+ ++.+|+||. ...|.|.+.. .......+
T Consensus 163 ~ii~vS~~~~~~l~~---~~~~~~------ki~vI~Ng~-~~~f~p~~~~----------------~~~~~~~~~~~~~~ 216 (415)
T cd03816 163 YNLCVTKAMKEDLQQ---FNNWKI------RATVLYDRP-PEQFRPLPLE----------------EKHELFLKLAKTFL 216 (415)
T ss_pred EeeecCHHHHHHHHh---hhccCC------CeeecCCCC-HHHceeCcHH----------------HHHHHHHhcccccc
Confidence 999999999999975 565544 899999994 4556654211 00111111
Q ss_pred -------HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--------CCcEEEEEeCCchhHHHHHHHHHHHCC-
Q 007224 394 -------EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--------ENVQIIVLGTGKKPMEKQLEQLEILYP- 457 (612)
Q Consensus 394 -------~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--------~~~~lvivG~g~~~~~~~l~~l~~~~~- 457 (612)
..++.. ++..+++++||+.++||++.|++|+..+.+ ++++|+|+|+|+ .++.++++.++++
T Consensus 217 ~~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~--~~~~l~~~~~~~~l 293 (415)
T cd03816 217 TRELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP--LKEKYLERIKELKL 293 (415)
T ss_pred ccccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc--cHHHHHHHHHHcCC
Confidence 112222 234678889999999999999999999853 479999999998 5677777777765
Q ss_pred CceEEEec-cChHHHHHHHHhcCEEEeCCC---CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccC
Q 007224 458 EKARGVAK-FNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 533 (612)
Q Consensus 458 ~~i~~~~~-~~~~~~~~~l~~adi~l~pS~---~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~ 533 (612)
.++..+.+ .+.+.+..+|+.||++++|+. .|++|++++|||+||+|||+++.||..|+++++.+|+++
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv-------- 365 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVF-------- 365 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEE--------
Confidence 24555544 477888899999999997532 478999999999999999999999999999999999986
Q ss_pred CCCCCCHHHHHHHHHHHHHhh-CHHHHHHHHHHHH-HhcCCcHHH
Q 007224 534 AVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGM-AQDLSWKGP 576 (612)
Q Consensus 534 ~v~~~d~~~la~~l~~ll~~~-~~~~~~~~~~~~~-~~~~sw~~~ 576 (612)
+ |+++++++|.+++++. .++.+.+|++++. ...++|+..
T Consensus 366 --~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~~~~~~ 406 (415)
T cd03816 366 --G--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESELRWDEN 406 (415)
T ss_pred --C--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhcCHHHH
Confidence 3 8999999999999872 2567788888774 245666543
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-30 Score=271.33 Aligned_cols=351 Identities=20% Similarity=0.208 Sum_probs=245.6
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+.. .||...++..|+++|.+.||+|+++++...... .....|++.+
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~~~~~~~~~ 51 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE-----------------------ELEALGVKVI 51 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc-----------------------ccccCCceEE
Confidence 68999875 589999999999999999999999998633211 0112344444
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+..... . . +..+.......+.+.++. ++|| +||+|.+...++..
T Consensus 52 ~~~~~~~--~-------------------~-~~~~~~~~~~~~~~~~~~------------~~~d-vv~~~~~~~~~~~~ 96 (359)
T cd03808 52 PIPLDRR--G-------------------I-NPFKDLKALLRLYRLLRK------------ERPD-IVHTHTPKPGILGR 96 (359)
T ss_pred ecccccc--c-------------------c-ChHhHHHHHHHHHHHHHh------------cCCC-EEEEccccchhHHH
Confidence 4421100 0 0 000111112223333333 3699 89999777666665
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
+..... ...++++++|+..+...... . .........+..+..+|.++++|
T Consensus 97 ~~~~~~------~~~~~i~~~~~~~~~~~~~~-----------~-------------~~~~~~~~~~~~~~~~d~ii~~s 146 (359)
T cd03808 97 LAARLA------GVPKVIYTVHGLGFVFTSGG-----------L-------------KRRLYLLLERLALRFTDKVIFQN 146 (359)
T ss_pred HHHHHc------CCCCEEEEecCcchhhccch-----------h-------------HHHHHHHHHHHHHhhccEEEEcC
Confidence 555432 46678888886543111100 0 00112234466678899999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+ ++.... ...+.+++||+|...+.+.... ..++.+.
T Consensus 147 ~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~ 190 (359)
T cd03808 147 EDDRDLALK---LGIIKK----KKTVLIPGSGVDLDRFSPSPEP-----------------------------IPEDDPV 190 (359)
T ss_pred HHHHHHHHH---hcCCCc----CceEEecCCCCChhhcCccccc-----------------------------cCCCCcE
Confidence 999999886 332210 1267788999998877654210 0135589
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhcCEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
|+|+|++.+.||++.+++++..+.+ ++++|+|+|.+......... +..+. ..++.+.+. .+.+..+++.||++
T Consensus 191 i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~-~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~ 267 (359)
T cd03808 191 FLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAIL-EIEKLGLEGRVEFLGF--RDDVPELLAAADVF 267 (359)
T ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHH-HHHhcCCcceEEEeec--cccHHHHHHhccEE
Confidence 9999999999999999999999974 78999999998743222211 12222 234555544 44566799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
++||..|++|++++|||+||+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++.+ ++.+.+
T Consensus 268 i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~ 335 (359)
T cd03808 268 VLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLV----------PPGDAEALADAIERLIED--PELRAR 335 (359)
T ss_pred EecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEE----------CCCCHHHHHHHHHHHHhC--HHHHHH
Confidence 99999999999999999999999999999999999999999987 899999999999999988 556666
Q ss_pred HHHHH---HHhcCCcHHHHHHHH
Q 007224 562 MMKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 562 ~~~~~---~~~~~sw~~~a~~~~ 581 (612)
+++++ +.++|||+.++++|+
T Consensus 336 ~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 336 MGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHHHhcCHHHHHHHhh
Confidence 66555 578999999999886
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=282.91 Aligned_cols=218 Identities=17% Similarity=0.137 Sum_probs=172.8
Q ss_pred HHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHH
Q 007224 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~ 389 (612)
+++..+..+|.++++|++.++.+.+. ++.. .++.+|+||+|++.|.+...
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~--~~~~-------~~~~vi~~gvd~~~~~~~~~--------------------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSL--WKRN-------TKPSIVYPPCDVEELLKLPL--------------------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHH--hCcC-------CCcEEEcCCCCHHHhccccc---------------------
Confidence 45667789999999999999998752 2221 27899999999887754321
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C-----CcEEEEEeCCch----hHHHHHHHHHHHCC-
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-----NVQIIVLGTGKK----PMEKQLEQLEILYP- 457 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~-----~~~lvivG~g~~----~~~~~l~~l~~~~~- 457 (612)
. ..++.++|+|+||+++.||++.+++|+.++.+ + +++|+|+|++.. .+.+.+++++.+++
T Consensus 232 ------~--~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l 303 (419)
T cd03806 232 ------D--EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGL 303 (419)
T ss_pred ------c--cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Confidence 0 01245799999999999999999999999865 2 599999998742 35677888877654
Q ss_pred -CceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCc-cccee---cCceEEEeccccccc
Q 007224 458 -EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL-VDTVE---EGFTGFQMGSFSVDC 532 (612)
Q Consensus 458 -~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~-~e~v~---~g~~G~l~~~~~~~~ 532 (612)
+++.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|||+++.||. .|++. ++.+|+++
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~------- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA------- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe-------
Confidence 4688887778888889999999999999999999999999999999999999775 57887 89999986
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCHHHHHHHH--HHHHHhcCCcHHHHH
Q 007224 533 EAVDPVDVAAVSTTVRRALATYGTQALAEMM--KNGMAQDLSWKGPAK 578 (612)
Q Consensus 533 ~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~--~~~~~~~~sw~~~a~ 578 (612)
.|+++++++|.++++++ ......+. ++...++|||+...+
T Consensus 377 -----~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 377 -----STAEEYAEAIEKILSLS-EEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred -----CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 39999999999999873 22222232 223568899998653
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=273.99 Aligned_cols=234 Identities=40% Similarity=0.683 Sum_probs=175.7
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCc-cEEEE--------EEeCCeeeEEEEEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIE--------LKVGDKIEKVRFFH 156 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~ 156 (612)
||+||++|+.|+.++||+++++..|+++|+++||+|+|++|.|+..++.... ....+ +.+.. ...+++++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEE
Confidence 7999999999999999999999999999999999999999999776665421 11111 22222 15678888
Q ss_pred eeecCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEec
Q 007224 157 CHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 236 (612)
Q Consensus 157 ~~~~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h 236 (612)
...+|+++++++++.|+.+ ..+|++. +.+|.++..||.+||++++++++.+++ +|| |||||
T Consensus 80 ~~~~~v~v~~i~~~~~f~r-------~~iY~~~-~~~~~d~~~rf~~fs~a~le~~~~l~~----------~pD-IIH~h 140 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPEYFDR-------PGIYGDN-GGDYPDNAERFAFFSRAALELLKKLGW----------KPD-IIHCH 140 (245)
T ss_dssp EEETTEEEEEEESHHHHGS-------SSSSBST-SSBHTTHHHHHHHHHHHHHHHHCTCT-----------S-S-EEEEE
T ss_pred EEcCCccEEEecChhhccc-------cceeccC-CCcchhHHHHHHHHHHHHHHHHHhhCC----------CCC-EEEec
Confidence 8889999999999999987 6699877 788999999999999999999998755 699 99999
Q ss_pred CCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHH
Q 007224 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 316 (612)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 316 (612)
||+++++|.+++..++..+.+.++|+++|+||+.|||.++...+..+++|....... +. ......+++++.++.
T Consensus 141 DW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~---~~---~~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 141 DWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNL---DE---YEFYGQINFLKAGIV 214 (245)
T ss_dssp CGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-ST---TT---TEETTEEEHHHHHHH
T ss_pred CchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccc---cc---cccccccCHHHHHHH
Confidence 999999999999998777777899999999999999999988888889886442211 11 112347899999999
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhh
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNII 346 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~ 346 (612)
.||+|+|||+.+++++.. ..+|..++.++
T Consensus 215 ~AD~v~TVS~~Ya~Ei~~-~~~g~GL~~~l 243 (245)
T PF08323_consen 215 YADKVTTVSPTYAREIQT-PEFGEGLEGLL 243 (245)
T ss_dssp HSSEEEESSHHHHHHTTS-HHHHTT-HHHH
T ss_pred hcCEeeeCCHHHHHHHhC-cccCCChHHHh
Confidence 999999999999999987 33454555444
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=271.38 Aligned_cols=340 Identities=22% Similarity=0.232 Sum_probs=236.0
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+.| .||.++++..|+++|+++||+|++++..... ...+. ..+++.+.
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~~~---------------------~~~~~~~~ 55 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-PPFYE---------------------LDPKIKVI 55 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-CCccc---------------------cCCcccee
Confidence 69999988765 6999999999999999999999999987432 11000 11233333
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+...... . . .........+.+.++. .+|| +|++|.+. ...
T Consensus 56 ~~~~~~~~-~---------~-------------~~~~~~~~~~~~~l~~------------~~~d-~i~~~~~~---~~~ 96 (348)
T cd03820 56 DLGDKRDS-K---------L-------------LARFKKLRRLRKLLKN------------NKPD-VVISFLTS---LLT 96 (348)
T ss_pred eccccccc-c---------h-------------hccccchHHHHHhhcc------------cCCC-EEEEcCch---HHH
Confidence 22211000 0 0 0000111122222222 3799 78887655 222
Q ss_pred HHHHhhcCCCCCCC-ceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 246 YLKTMYKPKGMYKS-AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 246 ~l~~~~~~~~~~~~-~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
++.... .+ +|++++.|+........ .......+..++.+|.++++
T Consensus 97 ~~~~~~------~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~d~ii~~ 142 (348)
T cd03820 97 FLASLG------LKIVKLIVSEHNSPDAYKKR----------------------------LRRLLLRRLLYRRADAVVVL 142 (348)
T ss_pred HHHHHh------hccccEEEecCCCccchhhh----------------------------hHHHHHHHHHHhcCCEEEEe
Confidence 222221 23 48999999643211000 01111367778899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+..+.... ... ..++.+|+||+|...+.+. ...+.+
T Consensus 143 s~~~~~~~~-----~~~------~~~~~vi~~~~~~~~~~~~--------------------------------~~~~~~ 179 (348)
T cd03820 143 TEEDRALYY-----KKF------NKNVVVIPNPLPFPPEEPS--------------------------------SDLKSK 179 (348)
T ss_pred CHHHHHHhh-----ccC------CCCeEEecCCcChhhcccc--------------------------------CCCCCc
Confidence 999872222 222 2289999999998765432 012457
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi 480 (612)
.++|+|++.+.||++.+++++.++.+ ++++|+|+|.+. ....++++..+++ .++...+. .+.+..+|+.||+
T Consensus 180 ~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~ 255 (348)
T cd03820 180 RILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP--EREALEALIKELGLEDRVILLGF--TKNIEEYYAKASI 255 (348)
T ss_pred EEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC--CHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCE
Confidence 99999999999999999999999974 789999999987 3455555555554 23443332 4667789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~ 559 (612)
+++||.+|++|++++|||+||+|||+++.+ +..+++.++.+|+++ ++.|+++++++|.+++++ ++.+
T Consensus 256 ~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~~i~~ll~~--~~~~ 323 (348)
T cd03820 256 FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLV----------PNGDVEALAEALLRLMED--EELR 323 (348)
T ss_pred EEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEe----------CCCCHHHHHHHHHHHHcC--HHHH
Confidence 999999999999999999999999999975 566777777799987 999999999999999998 6667
Q ss_pred HHHHHHH--HHhcCCcHHHHHHHHH
Q 007224 560 AEMMKNG--MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 560 ~~~~~~~--~~~~~sw~~~a~~~~~ 582 (612)
.++++++ ..+.|+|+.++++|.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (348)
T cd03820 324 KRMGANARESAERFSIENIIKQWEE 348 (348)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHhcC
Confidence 7777665 4688999999999863
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-30 Score=274.07 Aligned_cols=447 Identities=16% Similarity=0.200 Sum_probs=265.7
Q ss_pred EeccccCccccccHHHHhhhhHHHHH-hCCCeEEEEeecCCcc--cccCCccEE---EEE---EeCCeeeEEEEEEeeec
Q 007224 90 VGTEVAPWSKTGGLGDVLGGLPPALA-ANGHRVMTIAPRYDQY--KDAWDTDVV---IEL---KVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 90 v~~~~~P~~~~GG~~~~~~~La~~L~-~~Gh~V~vit~~~~~~--~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~ 160 (612)
+++|..- |.||+-+++..-|+.++ +.|-+..+|.|...+. .+....... +.. .....--.+++.+..++
T Consensus 7 ~swEV~N--KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~i~ 84 (590)
T cd03793 7 VAWEVAN--KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALDRMRSRGIKVHFGRWLIE 84 (590)
T ss_pred Eeehhhc--cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHHHHHhCCCeEEEeEEEcC
Confidence 3444333 68999999999888776 4588888888864311 111000000 000 00011124666677788
Q ss_pred CceEEEE-eChh-------hhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhh-ccCCCCCCCCCCCCcE
Q 007224 161 GVDRVFV-DHPW-------FLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL-NLNSNKYFSGPYGEDV 231 (612)
Q Consensus 161 gv~~~~l-~~~~-------~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~pDv 231 (612)
|-+++.+ |... ++.. .|...+ +-.+..+.+|.+. .-|...+..+++.+... .. -++|
T Consensus 85 G~P~viL~D~~~~~~~~~~~~~~-lW~~~~--i~s~~~~~d~nea-~~fgy~~~~~i~~~~~~~~~---------~~~d- 150 (590)
T cd03793 85 GYPKVVLFDIGSAAWKLDEWKGE-LWELCG--IGSPEGDRETNDA-IIFGFLVAWFLGEFAEQFDD---------EPAV- 150 (590)
T ss_pred CCCeEEEEeCchhhhhHHHHHHH-HHHHcC--CCCCCCCCcchHH-HHHHHHHHHHHHHHHhhccC---------CCCe-
Confidence 8877755 4222 2223 565444 3344444555443 34655555555444332 11 2588
Q ss_pred EEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccC-CcccccccCCCcccccccccccCCCCCc---CCcc
Q 007224 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYNKPV---RGRK 307 (612)
Q Consensus 232 vih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~ 307 (612)
|+|+|+|++++...+++... .++|+|||+|.+.. ||. .. |. ..+...++..++....- ....
T Consensus 151 ViH~HeWm~g~a~~~lK~~~------~~VptVfTtHAT~~-GR~l~~------g~-~~~y~~l~~~~~d~eA~~~~I~~r 216 (590)
T cd03793 151 VAHFHEWQAGVGLPLLRKRK------VDVSTIFTTHATLL-GRYLCA------GN-VDFYNNLDYFDVDKEAGKRGIYHR 216 (590)
T ss_pred EEEEcchhHhHHHHHHHHhC------CCCCEEEEeccccc-cccccc------CC-cccchhhhhcchhhhhhcccchHH
Confidence 99999999999999999643 68999999998776 653 10 10 11111111111110000 0122
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchh-hcch--
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV-MDAK-- 384 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~-~~~~-- 384 (612)
...++.+...||+++|||+.++.++.. .++.+++ + |||||+|+..|.+..+. .++ ..++
T Consensus 217 ~~iE~~aa~~Ad~fttVS~it~~E~~~--Ll~~~pd------~--ViPNGid~~~f~~~~e~--------~~~~~~~k~k 278 (590)
T cd03793 217 YCIERAAAHCAHVFTTVSEITAYEAEH--LLKRKPD------V--VLPNGLNVKKFSALHEF--------QNLHAQSKEK 278 (590)
T ss_pred HHHHHHHHhhCCEEEECChHHHHHHHH--HhCCCCC------E--EeCCCcchhhcccchhh--------hhhhHHhhhh
Confidence 346778889999999999999999986 4677765 3 89999999998765321 000 0000
Q ss_pred --HHHHHHHHHHhCCCCCCCCcEEEE-EcCccc-ccCHHHHHHHHHhccc------CCc---EEEEEeCCc---------
Q 007224 385 --PLLKEALQAEVGLPVDRNIPVIGF-IGRLEE-QKGSDILAAAIPHFIK------ENV---QIIVLGTGK--------- 442 (612)
Q Consensus 385 --~~~k~~l~~~~gl~~~~~~~~il~-iGrl~~-~Kg~d~ll~a~~~l~~------~~~---~lvivG~g~--------- 442 (612)
......++..++++ +++++++| +||++. +||+|.||+|++++.. .+. -|+|+=.+.
T Consensus 279 i~~f~~~~~~~~~~~~--~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~ 356 (590)
T cd03793 279 INEFVRGHFYGHYDFD--LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLK 356 (590)
T ss_pred hhHHHHHHHhhhcCCC--CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhc
Confidence 11122345556664 34577777 799998 9999999999999965 222 233332220
Q ss_pred -hh----HHHHHHHHHH----H----------------------------------------------------------
Q 007224 443 -KP----MEKQLEQLEI----L---------------------------------------------------------- 455 (612)
Q Consensus 443 -~~----~~~~l~~l~~----~---------------------------------------------------------- 455 (612)
.. ..+.+.++.. +
T Consensus 357 g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r 436 (590)
T cd03793 357 GQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIR 436 (590)
T ss_pred chHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHH
Confidence 01 1111111100 0
Q ss_pred ---C------CCceEEEeccC-------hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCc----ccc
Q 007224 456 ---Y------PEKARGVAKFN-------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDT 515 (612)
Q Consensus 456 ---~------~~~i~~~~~~~-------~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~ 515 (612)
+ ..+++++..|. +....+++++||++|+||.+||||++++|||+||+|+|+|+.+|+ .|+
T Consensus 437 ~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~ 516 (590)
T cd03793 437 RIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEH 516 (590)
T ss_pred HhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHH
Confidence 0 01233333220 122446999999999999999999999999999999999999998 555
Q ss_pred eecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH-HHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 516 VEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 516 v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~-~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+.++ ..|+.+-+.+. .--+.++++++++|.++++...++.+.+.+. ...++.|+|+..++.|.+.|+.++.
T Consensus 517 v~~~~~~gi~V~~r~~---~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 517 IEDPESYGIYIVDRRF---KSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred hccCCCceEEEecCCc---cchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 5544 35666511100 0014568888899988885421222222221 1357889999999999999987763
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-30 Score=275.49 Aligned_cols=222 Identities=15% Similarity=0.122 Sum_probs=168.0
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
.+++..++.+|.++++|+..++.+.+. .+... .++.+||||+|.+.|.|.....
T Consensus 164 ~~e~~~~~~ad~vi~~S~~~~~~l~~~--~~~~~------~~v~vipngvd~~~f~~~~~~~------------------ 217 (397)
T TIGR03087 164 AYERAIAARFDAATFVSRAEAELFRRL--APEAA------GRITAFPNGVDADFFSPDRDYP------------------ 217 (397)
T ss_pred HHHHHHHhhCCeEEEcCHHHHHHHHHh--CCCCC------CCeEEeecccchhhcCCCcccc------------------
Confidence 455677889999999999999998751 22222 2789999999999887653210
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHH----HHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEE
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA----AAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll----~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~ 462 (612)
..+ .++.++|+|+||+.++||++.++ ++++.+.+ ++++|+|+|+|+. ..++++... .++.+
T Consensus 218 ------~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~~--~~V~~ 284 (397)
T TIGR03087 218 ------NPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAAL--PGVTV 284 (397)
T ss_pred ------CCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhccC--CCeEE
Confidence 001 12457899999999999999988 44555543 7899999999873 245555433 23666
Q ss_pred EeccChHHHHHHHHhcCEEEeCCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHH
Q 007224 463 VAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~adi~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 541 (612)
.+..+ .+..+|+.||++|+||+. ||+|++++|||+||+|||+|+.++ ..+..++++|+++ . +|++
T Consensus 285 ~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~-~~i~~~~~~g~lv----------~-~~~~ 350 (397)
T TIGR03087 285 TGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAA-EGIDALPGAELLV----------A-ADPA 350 (397)
T ss_pred eeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCccc-ccccccCCcceEe----------C-CCHH
Confidence 65544 346799999999999985 999999999999999999999754 2333345678875 5 8999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHH
Q 007224 542 AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 542 ~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~ 585 (612)
+++++|.+++++ ++.+.+|++++ +.++|||+..+++++++|.
T Consensus 351 ~la~ai~~ll~~--~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 351 DFAAAILALLAN--PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999998 55566666655 5689999999999999885
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-29 Score=269.62 Aligned_cols=207 Identities=16% Similarity=0.126 Sum_probs=158.4
Q ss_pred cCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCC
Q 007224 318 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 318 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl 397 (612)
+|.|+++|.... .+.. . .+. ..||||++.|.|... ...+.++|+
T Consensus 499 cD~VIaPS~atq-~L~~---~-----------vI~-nVnGVDte~F~P~~r--------------------~~~~r~lgi 542 (794)
T PLN02501 499 CHKVLRLSAATQ-DLPK---S-----------VIC-NVHGVNPKFLKIGEK--------------------VAEERELGQ 542 (794)
T ss_pred CCEEEcCCHHHH-Hhcc---c-----------cee-ecccccccccCCcch--------------------hHHHHhcCC
Confidence 899999997766 3321 0 222 237999999988642 122245666
Q ss_pred CCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007224 398 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 398 ~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l 475 (612)
+..+ +.++|+||+.++||++.|++|+..+.. ++++|+|+|+|+ .++.++++..+++..+.+.+.. +....+|
T Consensus 543 ~~~~--kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP--~reeLe~la~eLgL~V~FLG~~--dd~~~ly 616 (794)
T PLN02501 543 QAFS--KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE--DAHEVQRAAKRLDLNLNFLKGR--DHADDSL 616 (794)
T ss_pred cccc--CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc--cHHHHHHHHHHcCCEEEecCCC--CCHHHHH
Confidence 5332 458999999999999999999998865 689999999998 5677888777766444444332 2234699
Q ss_pred HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC
Q 007224 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 476 ~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 555 (612)
+.+|+||+||..|+||++++||||||+|||+++.+|. +++.++.+|++ ..|.++++++|.+++++.
T Consensus 617 asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll------------~~D~EafAeAI~~LLsd~- 682 (794)
T PLN02501 617 HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLT------------YKTSEDFVAKVKEALANE- 682 (794)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEe------------cCCHHHHHHHHHHHHhCc-
Confidence 9999999999999999999999999999999999985 45777888885 378999999999999983
Q ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 007224 556 TQALAEMMKNGMAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 556 ~~~~~~~~~~~~~~~~sw~~~a~~~~~~y 584 (612)
+....+.. ...|||+.+++++++.-
T Consensus 683 -~~rl~~~a---~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 683 -PQPLTPEQ---RYNLSWEAATQRFMEYS 707 (794)
T ss_pred -hhhhHHHH---HhhCCHHHHHHHHHHhh
Confidence 22222222 45899999999999865
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-28 Score=252.85 Aligned_cols=334 Identities=23% Similarity=0.254 Sum_probs=224.9
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+. .||.+.++..|+++|.+.||+|++++............. ... .....
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~------------~~~-------~~~~~ 57 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPS------------NVK-------LIPVR 57 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCcccccccc------------chh-------hhcee
Confidence 6899998642 699999999999999999999999998643222110000 000 00000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCC-ccchHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW-HTSLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~-~~~~~~ 244 (612)
... . . .+ ........+.+.++.. +|| +||+|.+ ...++.
T Consensus 58 ~~~----~-~---------~~-------------~~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~ 97 (353)
T cd03811 58 VLK----L-K---------SL-------------RDLLAILRLRRLLRKE------------KPD-VVISHLTTTPNVLA 97 (353)
T ss_pred eee----c-c---------cc-------------cchhHHHHHHHHHHhc------------CCC-EEEEcCccchhHHH
Confidence 000 0 0 00 0011122233333332 699 8888876 333333
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
.+.+. .++|+++++|+......... .......+..+..+|.++++
T Consensus 98 ~~~~~--------~~~~~i~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~d~ii~~ 142 (353)
T cd03811 98 LLAAR--------LGTKLIVWEHNSLSLELKRK---------------------------LRLLLLIRKLYRRADKIVAV 142 (353)
T ss_pred HHHhh--------cCCceEEEEcCcchhhhccc---------------------------hhHHHHHHhhccccceEEEe
Confidence 22221 26899999997554211100 00002456678899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+.+. ++.+. .++.+|+||+|...+.+...+ .. ..+. ..+.+
T Consensus 143 s~~~~~~~~~~--~~~~~------~~~~vi~~~~~~~~~~~~~~~--------------------~~--~~~~--~~~~~ 190 (353)
T cd03811 143 SEGVKEDLLKL--LGIPP------DKIEVIYNPIDIEEIRALAEE--------------------PL--ELGI--PPDGP 190 (353)
T ss_pred ccchhhhHHHh--hcCCc------cccEEecCCcChhhcCcccch--------------------hh--hcCC--CCCce
Confidence 99999998862 33222 289999999998887654321 00 1222 24568
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi 480 (612)
+|+|+||+.+.||++.+++++.++.+ ++++|+++|.+. ....++++..+++ .++...+.. +.+..+++.||+
T Consensus 191 ~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~ 266 (353)
T cd03811 191 VILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP--LREELEALAKELGLADRVHFLGFQ--SNPYPYLKAADL 266 (353)
T ss_pred EEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCc--cHHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCE
Confidence 99999999999999999999999976 589999999987 3445555555543 345554442 335679999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHH---HHHHHHHHhhCHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYGTQ 557 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la---~~l~~ll~~~~~~ 557 (612)
+++||.+|++|++++|||++|+|||+++.||..|++.++.+|+++ ++.|.++++ +.+..+.++ ++
T Consensus 267 ~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~~~~~~~i~~~~~~--~~ 334 (353)
T cd03811 267 FVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLV----------PVGDEAALAAAALALLDLLLD--PE 334 (353)
T ss_pred EEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEE----------CCCCHHHHHHHHHHHHhccCC--hH
Confidence 999999999999999999999999999999999999999999988 899999995 444455544 45
Q ss_pred HHHHHHHH
Q 007224 558 ALAEMMKN 565 (612)
Q Consensus 558 ~~~~~~~~ 565 (612)
.+.+++.+
T Consensus 335 ~~~~~~~~ 342 (353)
T cd03811 335 LRERLAAA 342 (353)
T ss_pred HHHHHHHH
Confidence 55555553
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=260.02 Aligned_cols=206 Identities=20% Similarity=0.238 Sum_probs=170.5
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
.+.+..++.+|.++++|+..++.+.+. ++. +..+|+||+|.+.|.+..
T Consensus 145 ~~~~~~~~~~d~ii~~S~~~~~~~~~~--~~~---------~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 145 IWDRRSAARVDYFIANSRFVARRIKKY--YGR---------DATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred HHHHHHhcCCCEEEECCHHHHHHHHHH--hCC---------CcEEECCCCCHhhcCcCC---------------------
Confidence 345566789999999999999998751 221 467899999988876542
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccCh
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~ 468 (612)
...+.++|+||+.+.||++.+++|+.++. ++|+|+|+|+ ..+.+++ ....++.+.+..+.
T Consensus 193 ------------~~~~~il~~G~~~~~K~~~~li~a~~~~~---~~l~ivG~g~--~~~~l~~---~~~~~V~~~g~~~~ 252 (351)
T cd03804 193 ------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG---KRLVVIGDGP--ELDRLRA---KAGPNVTFLGRVSD 252 (351)
T ss_pred ------------CCCCEEEEEEcCccccChHHHHHHHHHCC---CcEEEEECCh--hHHHHHh---hcCCCEEEecCCCH
Confidence 12357999999999999999999999883 8999999987 3444444 34567888888888
Q ss_pred HHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHH
Q 007224 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 469 ~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~ 548 (612)
+++..+++.||++++||. |+||++++|||+||+|||+++.||..|++.++.+|+++ ++.|+++++++|.
T Consensus 253 ~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~----------~~~~~~~la~~i~ 321 (351)
T cd03804 253 EELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILF----------EEQTVESLAAAVE 321 (351)
T ss_pred HHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEe----------CCCCHHHHHHHHH
Confidence 888899999999999999 99999999999999999999999999999999999987 9999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHH
Q 007224 549 RALATYGTQALAEMMKNGMAQDLSWKGPAKKW 580 (612)
Q Consensus 549 ~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~ 580 (612)
++++++. ...+++.++ .+.|+|++..+++
T Consensus 322 ~l~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 350 (351)
T cd03804 322 RFEKNED-FDPQAIRAH--AERFSESRFREKI 350 (351)
T ss_pred HHHhCcc-cCHHHHHHH--HHhcCHHHHHHHh
Confidence 9999842 333344433 3579999998875
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=246.90 Aligned_cols=225 Identities=16% Similarity=0.224 Sum_probs=169.5
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
++....+.+.+.++++|+..++.+.+ .|++. .+ .|+||+|.+.|.|.... .
T Consensus 84 ~~y~~~m~~~~~vIavS~~t~~~L~~---~G~~~-------~i-~I~~GVD~~~f~p~~~~------------------~ 134 (335)
T PHA01633 84 EIVNKYLLQDVKFIPNSKFSAENLQE---VGLQV-------DL-PVFHGINFKIVENAEKL------------------V 134 (335)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHH---hCCCC-------ce-eeeCCCChhhcCccchh------------------h
Confidence 34555667788999999999999986 56552 23 47899999988775311 2
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCchhHHHHHHHHHHHCCCceEE
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~----~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~ 462 (612)
..++++++... ++.++|+++||+.++||++.|++|+.++.+ + +++++++|.+ .++++. .+.++.+
T Consensus 135 ~~~r~~~~~~~-~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l~--l~~~V~f 205 (335)
T PHA01633 135 PQLKQKLDKDF-PDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQLE--VPANVHF 205 (335)
T ss_pred HHHHHHhCcCC-CCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHcC--CCCcEEE
Confidence 34566665432 245799999999999999999999999865 3 4588888742 233322 4455766
Q ss_pred Eec--c-ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC------------------ce
Q 007224 463 VAK--F-NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------------------FT 521 (612)
Q Consensus 463 ~~~--~-~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------------------~~ 521 (612)
.+. + +.+.+..+|+.||++|+||.+|+||++++|||+||+|||+++.||+.|++.++ .+
T Consensus 206 ~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~ 285 (335)
T PHA01633 206 VAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQ 285 (335)
T ss_pred EecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCc
Confidence 642 2 56778889999999999999999999999999999999999999999976532 23
Q ss_pred EEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q 007224 522 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 582 (612)
Q Consensus 522 G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~ 582 (612)
||.+ ++.|+++++++|.++++..+++.+ .+.....++.|+|+.+.++|++
T Consensus 286 g~~~----------~~~d~~~la~ai~~~~~~~~~~~~-~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 286 KWKI----------HKFQIEDMANAIILAFELQDREER-SMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeee----------cCCCHHHHHHHHHHHHhccChhhh-hHHHHHHHHhcCHHHHHHHhhC
Confidence 4544 889999999999999876444333 2223346799999999999974
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=268.89 Aligned_cols=224 Identities=17% Similarity=0.124 Sum_probs=173.1
Q ss_pred HHHhcCEEEecCHHHHHHHHccc-cCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHH
Q 007224 314 GILESDMVLTVSPHYAQELVSGE-DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 314 ~~~~ad~vi~vS~~~~~~l~~~~-~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~ 392 (612)
....+|.++++|+..++.+.+.. .++.. ..++.+||||++...+.|..
T Consensus 267 ~~~~~D~iI~~S~~~~~~l~~~~~~~~~~------~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 267 NADYIDFFITATDIQNQILKNQFKKYYNI------EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred chhhCCEEEECCHHHHHHHHHHhhhhcCC------CCcEEEEcCCCcccccCccc-------------------------
Confidence 35578999999999888877521 12221 12789999998754433211
Q ss_pred HHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccCh
Q 007224 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNI 468 (612)
Q Consensus 393 ~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~ 468 (612)
.+....|+|+||+.+.||++.+++|+.++.+ ++++|+|+|.|+ ..+.++++..+++ +.+.+.+ +.
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~--~~~~l~~~i~~~~l~~~V~f~G-~~- 384 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGG--EKQKLQKIINENQAQDYIHLKG-HR- 384 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECch--hHHHHHHHHHHcCCCCeEEEcC-CC-
Confidence 1233689999999999999999999999865 799999999998 4577888877764 3455554 32
Q ss_pred HHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCceEEEecccc-cccCCCCCCC-HHHHHH
Q 007224 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFS-VDCEAVDPVD-VAAVST 545 (612)
Q Consensus 469 ~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~-~~~~~v~~~d-~~~la~ 545 (612)
.+..+++.||++|+||..|+||++++|||+||+|||+++.+ |.+|+|.+|.+|+++...+ .+ ++.| ++++++
T Consensus 385 -~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~----d~~~~~~~la~ 459 (500)
T TIGR02918 385 -NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEED----DEDQIITALAE 459 (500)
T ss_pred -CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcccc----chhHHHHHHHH
Confidence 34569999999999999999999999999999999999986 8999999999999982100 00 1223 899999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHH
Q 007224 546 TVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 546 ~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l 587 (612)
+|.++++ ++.+.+|++++ .++.|||+.++++|+++++++
T Consensus 460 ~I~~ll~---~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 460 KIVEYFN---SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHhC---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999994 33566777776 468999999999999999764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-28 Score=253.49 Aligned_cols=231 Identities=14% Similarity=0.162 Sum_probs=173.5
Q ss_pred hHHHHH-HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHH
Q 007224 309 NWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 309 ~~~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
.++... ...+|.++++|+..++.+.+ .|++. +.++.+||||+|.+.|.|....
T Consensus 85 ~~~~~~~~~~ad~ii~~S~~~~~~l~~---~g~~~-----~~~i~vIpNGVd~~~f~~~~~~------------------ 138 (331)
T PHA01630 85 TALYFFRNQPVDEIVVPSQWSKNAFYT---SGLKI-----PQPIYVIPHNLNPRMFEYKPKE------------------ 138 (331)
T ss_pred HHHHHHhhccCCEEEECCHHHHHHHHH---cCCCC-----CCCEEEECCCCCHHHcCCCccc------------------
Confidence 455555 56899999999999999875 44331 1279999999999888654210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEec
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~ 465 (612)
.++..++++.|++.++||++.|++|++++.+ ++++++++|++... ..+. ...+ + ...
T Consensus 139 ------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~--~~l~----~~~~-~--~~~ 197 (331)
T PHA01630 139 ------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD--PRLF----GLNG-V--KTP 197 (331)
T ss_pred ------------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc--hhhc----cccc-e--ecc
Confidence 1133577788899999999999999999976 68999999976521 1111 1111 1 223
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccc---------cccCCCC
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFS---------VDCEAVD 536 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~---------~~~~~v~ 536 (612)
.+.+.+..+|+.||++++||++|+||++++|||+||+|||+|+.||+.|++.++.+|+++.... .+|..+-
T Consensus 198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v 277 (331)
T PHA01630 198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL 277 (331)
T ss_pred CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccccc
Confidence 4567788899999999999999999999999999999999999999999999999999873210 1233333
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHH-HH--HHhcCCcHHHHHHHHHHHHH
Q 007224 537 PVDVAAVSTTVRRALATYGTQALAEMMK-NG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 537 ~~d~~~la~~l~~ll~~~~~~~~~~~~~-~~--~~~~~sw~~~a~~~~~~y~~ 586 (612)
+.|.+++++.+.+++.+..++.+.++.. ++ ..++|||+.++++|+++|++
T Consensus 278 ~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 278 DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 4588899999999998743333333333 22 57999999999999999974
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-27 Score=255.43 Aligned_cols=220 Identities=15% Similarity=0.143 Sum_probs=179.2
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
.+.+..+..+|.++++|+..++.+.+. ++...+ ++.+++||+|...+.+..
T Consensus 175 ~~~~~~~~~~d~ii~~S~~~~~~l~~~--~~~~~~------ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 175 PLRRYLLSSLDAVFPCSEQGRNYLQKR--YPAYKE------KIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHH--CCCccc------cEEEEECCcccccccCCC---------------------
Confidence 344556789999999999999998852 454433 789999999977554321
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C--CcEEEEEeCCchhHHHHHHHHHHHCC--CceEE
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~--~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~ 462 (612)
..++.+.|+++||+.+.||++.+++|+.++.+ + +++++++|+|+ ..+.++++..+.+ .++.+
T Consensus 226 ----------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--~~~~l~~~~~~~~~~~~V~f 293 (407)
T cd04946 226 ----------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--LEDTLKELAESKPENISVNF 293 (407)
T ss_pred ----------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--HHHHHHHHHHhcCCCceEEE
Confidence 11245789999999999999999999999976 2 57778899987 5566777765543 35777
Q ss_pred EeccChHHHHHHHHh--cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCC-CC
Q 007224 463 VAKFNIPLAHMIIAG--ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP-VD 539 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~--adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~-~d 539 (612)
.+..+.+++..+++. +|++++||..||+|++++|||+||+|||+|++||..|++.++.+|+++ ++ .|
T Consensus 294 ~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~----------~~~~~ 363 (407)
T cd04946 294 TGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL----------SKDPT 363 (407)
T ss_pred ecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe----------CCCCC
Confidence 777777777788875 789999999999999999999999999999999999999999999987 65 58
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHH
Q 007224 540 VAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 540 ~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~ 581 (612)
+++++++|.+++++ ++.+.+|++++ +.++|+|+...+++.
T Consensus 364 ~~~la~~I~~ll~~--~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 364 PNELVSSLSKFIDN--EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999999999997 66666666666 579999999988875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-27 Score=248.57 Aligned_cols=245 Identities=14% Similarity=0.096 Sum_probs=174.3
Q ss_pred CCcEEEEecCCccc---hHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcC
Q 007224 228 GEDVVFVANDWHTS---LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 304 (612)
Q Consensus 228 ~pDvvih~h~~~~~---~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 304 (612)
+|| |||+|..... +.+.++... .++|+++++|+..+. .. ..+... .....
T Consensus 100 ~~D-vV~~~~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~-~~------~~~~~~------------~~~~~ 152 (371)
T PLN02275 100 RPD-VFLVQNPPSVPTLAVVKLACWL-------RRAKFVIDWHNFGYT-LL------ALSLGR------------SHPLV 152 (371)
T ss_pred CCC-EEEEeCCCCcHHHHHHHHHHHH-------hCCCEEEEcCCccHH-HH------hcccCC------------CCHHH
Confidence 799 8999864432 222333332 478999999975321 00 000000 00001
Q ss_pred CcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcch
Q 007224 305 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 305 ~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
.....+++..++.+|.++++|+..++.+.+. +|+ ++.+|+||. .+.|.|....
T Consensus 153 ~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~--~g~---------~i~vi~n~~-~~~f~~~~~~--------------- 205 (371)
T PLN02275 153 RLYRWYERHYGKMADGHLCVTKAMQHELDQN--WGI---------RATVLYDQP-PEFFRPASLE--------------- 205 (371)
T ss_pred HHHHHHHHHHHhhCCEEEECCHHHHHHHHHh--cCC---------CeEEECCCC-HHHcCcCCch---------------
Confidence 1122345666788999999999999998751 343 268899984 4666554210
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc-------------------cCCcEEEEEeCCchhH
Q 007224 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-------------------KENVQIIVLGTGKKPM 445 (612)
Q Consensus 385 ~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~-------------------~~~~~lvivG~g~~~~ 445 (612)
. .+.. +...+++++||+.++||++.+++|+..+. .++++|+|+|+|+ .
T Consensus 206 ----~------~~~~-~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~--~ 272 (371)
T PLN02275 206 ----I------RLRP-NRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP--Q 272 (371)
T ss_pred ----h------cccC-CCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC--C
Confidence 0 0111 12357889999999999999999998872 2689999999998 5
Q ss_pred HHHHHHHHHHCC-CceEEEec-cChHHHHHHHHhcCEEEeCC--C-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCc
Q 007224 446 EKQLEQLEILYP-EKARGVAK-FNIPLAHMIIAGADFILIPS--R-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF 520 (612)
Q Consensus 446 ~~~l~~l~~~~~-~~i~~~~~-~~~~~~~~~l~~adi~l~pS--~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~ 520 (612)
++.++++.++.+ .++.+... .+.+++..+|+.||++++|+ . .|++|++++|||+||+|||+++.||..|+|.++.
T Consensus 273 ~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~ 352 (371)
T PLN02275 273 KAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGK 352 (371)
T ss_pred HHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCC
Confidence 677777777665 24666554 46788889999999999863 2 3899999999999999999999999999999999
Q ss_pred eEEEecccccccCCCCCCCHHHHHHHHHHHH
Q 007224 521 TGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 521 ~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll 551 (612)
+|+++ + |+++++++|.+++
T Consensus 353 ~G~lv----------~--~~~~la~~i~~l~ 371 (371)
T PLN02275 353 NGLLF----------S--SSSELADQLLELL 371 (371)
T ss_pred CeEEE----------C--CHHHHHHHHHHhC
Confidence 99987 4 6999999998764
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-26 Score=244.35 Aligned_cols=215 Identities=20% Similarity=0.209 Sum_probs=173.7
Q ss_pred HHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHH
Q 007224 311 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 311 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~ 390 (612)
+...+..+|.++++|+..++.+.+. ++.. .++.+||||++...+.+...
T Consensus 151 ~~~~~~~~d~ii~~s~~~~~~l~~~--~~~~-------~~v~~ip~g~~~~~~~~~~~---------------------- 199 (372)
T cd04949 151 VFENLDKVDGVIVATEQQKQDLQKQ--FGNY-------NPIYTIPVGSIDPLKLPAQF---------------------- 199 (372)
T ss_pred HHhChhhCCEEEEccHHHHHHHHHH--hCCC-------CceEEEcccccChhhcccch----------------------
Confidence 3344678999999999999988752 2221 14889999999877655310
Q ss_pred HHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEecc
Q 007224 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKF 466 (612)
Q Consensus 391 l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~ 466 (612)
..+....++++||+.+.||++.+++++.++.. ++++|+|+|.|. ....++++..+.+ +.+...+ +
T Consensus 200 --------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g-~ 268 (372)
T cd04949 200 --------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGD--EEEKLKELIEELGLEDYVFLKG-Y 268 (372)
T ss_pred --------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCc--hHHHHHHHHHHcCCcceEEEcC-C
Confidence 01244689999999999999999999999965 789999999987 3455555555543 3444443 3
Q ss_pred ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCceEEEecccccccCCCCCCCHHHHHH
Q 007224 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~ 545 (612)
.+.+..+|+.||++|+||..|+||++++|||+||+|||+++.+ |..|++.++.+|+++ ++.|++++++
T Consensus 269 -~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv----------~~~d~~~la~ 337 (372)
T cd04949 269 -TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLV----------PKGDIEALAE 337 (372)
T ss_pred -CCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEe----------CCCcHHHHHH
Confidence 3446679999999999999999999999999999999999987 899999999999987 8999999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHH
Q 007224 546 TVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKW 580 (612)
Q Consensus 546 ~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~ 580 (612)
+|.+++.+ ++.+.++++++. .++|||+.++++|
T Consensus 338 ~i~~ll~~--~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELLND--PKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHcC--HHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999998 667777777774 6899999999876
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=245.77 Aligned_cols=291 Identities=16% Similarity=0.196 Sum_probs=202.5
Q ss_pred CcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccc-cccCCCcccccccccccCCCCCcCCcc
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+|.+|++||+|..++|.+++... .+.+++|.+|.. ||.... ..+ ..
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~------~~~~i~~f~Hip-----fP~~e~~~~l----------------------p~ 177 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERG------PDARIGFFLHIP-----FPSSEIFRCL----------------------PW 177 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCC-----CCChHHHhhC----------------------CC
Confidence 43399999999999999988754 578999999942 332111 100 01
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHcccc--CCccch--h----hhhccCeEEeeCCCccCccCCCCccccccccCcch
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--N----IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~--~----~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
...+-.++..+|.|.+.+..+.+.+.+... .+.+.. . .-+..++.+||||+|++.|.+...
T Consensus 178 ~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~----------- 246 (460)
T cd03788 178 REELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAA----------- 246 (460)
T ss_pred hHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhc-----------
Confidence 223445677799999999777665443111 111100 0 001237899999999998875421
Q ss_pred hhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CC----cEEEEEeCCc-------hhHH
Q 007224 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTGK-------KPME 446 (612)
Q Consensus 380 ~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~----~~lvivG~g~-------~~~~ 446 (612)
....++.+++..+.. +++++|+++||+++.||++.+++|++++.+ ++ ++|+++|.+. ..++
T Consensus 247 ----~~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~ 320 (460)
T cd03788 247 ----SPEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELR 320 (460)
T ss_pred ----CchhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHH
Confidence 111123333333433 356899999999999999999999998865 43 6788887532 2355
Q ss_pred HHHHHHHHHCC--------CceEEEe-ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCc----eEEcCCCCcc
Q 007224 447 KQLEQLEILYP--------EKARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLV 513 (612)
Q Consensus 447 ~~l~~l~~~~~--------~~i~~~~-~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~ 513 (612)
+++++++.+.+ ..+..+. ..+.+++..+|+.||++|+||..|+||++++|||+||+| +|+|+.+|..
T Consensus 321 ~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~ 400 (460)
T cd03788 321 REVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAA 400 (460)
T ss_pred HHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccch
Confidence 56666544322 1244443 347788889999999999999999999999999999999 9999988888
Q ss_pred cceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHH
Q 007224 514 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEET 583 (612)
Q Consensus 514 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~ 583 (612)
+. +.+|+++ +|.|+++++++|.++++++ .+.+.++.+++ ...+|||+..+++++.-
T Consensus 401 ~~---~~~g~lv----------~p~d~~~la~ai~~~l~~~-~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 401 EE---LSGALLV----------NPYDIDEVADAIHRALTMP-LEERRERHRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred hh---cCCCEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 77 4578987 9999999999999999874 34444444433 35789999999988754
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.7e-25 Score=237.51 Aligned_cols=293 Identities=17% Similarity=0.187 Sum_probs=205.1
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCccc-ccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
++|.+|.+||+|..++|.+++... .+.++.|.+|. .||..+ |..+ .
T Consensus 126 ~~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlHi-----pfP~~e~f~~l----------------------p 172 (456)
T TIGR02400 126 QPGDIVWVHDYHLMLLPAMLRELG------VQNKIGFFLHI-----PFPSSEIYRTL----------------------P 172 (456)
T ss_pred CCCCEEEEecchhhHHHHHHHhhC------CCCeEEEEEeC-----CCCChHHHhhC----------------------C
Confidence 354499999999999999999875 67899999993 333221 1111 1
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHcccc--CCccchh-----hhhccCeEEeeCCCccCccCCCCccccccccCcch
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-----~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
....+-.++..+|.|-+.+..+++.+.+... .|.+... .-+..++.++|||+|++.|.+....
T Consensus 173 ~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~---------- 242 (456)
T TIGR02400 173 WRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKK---------- 242 (456)
T ss_pred cHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcC----------
Confidence 2344567888999999999999887665221 1221110 0133578999999999998764211
Q ss_pred hhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeC-----Cc--hhHH
Q 007224 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGT-----GK--KPME 446 (612)
Q Consensus 380 ~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~----~~~lvivG~-----g~--~~~~ 446 (612)
.......+.++++++ ++++|+++||+++.||++.+++|++++.+ + ++.|+++|. ++ ..++
T Consensus 243 --~~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~ 315 (456)
T TIGR02400 243 --PSVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLR 315 (456)
T ss_pred --hhHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHH
Confidence 000111224566553 55799999999999999999999999864 3 356887753 22 2344
Q ss_pred HHHHHHHHHC----CC----ceEEEe-ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCc----eEEcCCCCcc
Q 007224 447 KQLEQLEILY----PE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLV 513 (612)
Q Consensus 447 ~~l~~l~~~~----~~----~i~~~~-~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~ 513 (612)
++++++..+. +. .+.... ..+.+++..+|+.||++++||..||||++++|||+||+| +|+|+.+|..
T Consensus 316 ~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~ 395 (456)
T TIGR02400 316 RQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA 395 (456)
T ss_pred HHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh
Confidence 5555553221 11 123322 346788889999999999999999999999999999999 9999998888
Q ss_pred cceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHH
Q 007224 514 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 514 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y 584 (612)
+.+. +|+++ +|.|+++++++|.++++++. +.+.++.++. ....||+...++++++-+
T Consensus 396 ~~l~---~gllV----------nP~d~~~lA~aI~~aL~~~~-~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 396 QELN---GALLV----------NPYDIDGMADAIARALTMPL-EEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred HHhC---CcEEE----------CCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 8774 68977 99999999999999998743 2333222222 245699999999888654
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-24 Score=225.04 Aligned_cols=342 Identities=16% Similarity=0.047 Sum_probs=223.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++.. .||.......|+++|.++||+|++++.......+ .....|+++
T Consensus 2 ~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~----------------------~~~~~g~~~ 53 (357)
T PRK00726 2 KKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGMEAR----------------------LVPKAGIEF 53 (357)
T ss_pred cEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchhhh----------------------ccccCCCcE
Confidence 899999864 5888888889999999999999999875311000 001136777
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.++.+..... ...........+...+..+.+.+. .++|| |||+|.|...+..
T Consensus 54 ~~~~~~~~~~~-----------------~~~~~l~~~~~~~~~~~~~~~~ik---------~~~pD-vv~~~~~~~~~~~ 106 (357)
T PRK00726 54 HFIPSGGLRRK-----------------GSLANLKAPFKLLKGVLQARKILK---------RFKPD-VVVGFGGYVSGPG 106 (357)
T ss_pred EEEeccCcCCC-----------------ChHHHHHHHHHHHHHHHHHHHHHH---------hcCCC-EEEECCCcchhHH
Confidence 76653321110 001111112222233333322222 23699 9999988776665
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
.++... .++|++++.|+... . ...+..+..+|.+++.
T Consensus 107 ~~~~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~r~~~~~~d~ii~~ 143 (357)
T PRK00726 107 GLAARL-------LGIPLVIHEQNAVP----------------------------------G--LANKLLARFAKKVATA 143 (357)
T ss_pred HHHHHH-------cCCCEEEEcCCCCc----------------------------------c--HHHHHHHHHhchheEC
Confidence 554443 57899887663211 0 1123346689999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
++... .. .+. .++.+|+||+|.+.+.+.. .+++++++ ++.+
T Consensus 144 ~~~~~---~~-----~~~------~~i~vi~n~v~~~~~~~~~-----------------------~~~~~~~~--~~~~ 184 (357)
T PRK00726 144 FPGAF---PE-----FFK------PKAVVTGNPVREEILALAA-----------------------PPARLAGR--EGKP 184 (357)
T ss_pred chhhh---hc-----cCC------CCEEEECCCCChHhhcccc-----------------------hhhhccCC--CCCe
Confidence 87432 11 222 2899999999987664321 11234443 3457
Q ss_pred EEEEEcCcccccCHHHHH-HHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 405 VIGFIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll-~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
+|+++|+....|+...++ +|+.++.+....++++|.|. .+...+.+ . .+.++... .+. +....+++.||+++.
T Consensus 185 ~i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~--~~~~~~~~-~-~~~~v~~~-g~~-~~~~~~~~~~d~~i~ 258 (357)
T PRK00726 185 TLLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD--LEEVRAAY-A-AGINAEVV-PFI-DDMAAAYAAADLVIC 258 (357)
T ss_pred EEEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc--HHHHHHHh-h-cCCcEEEe-ehH-hhHHHHHHhCCEEEE
Confidence 889999988888865555 99988855335577889887 33333333 3 44333333 333 456689999999998
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccceecCceEEEecccccccCCCCCCC--HHHHHHHHHHHHHh
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~l~~ll~~ 553 (612)
+|- +++++|||++|+|+|++..++ ..+.+.+.++|+++ ++.| +++++++|++++++
T Consensus 259 ~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~----------~~~~~~~~~l~~~i~~ll~~ 324 (357)
T PRK00726 259 RAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLI----------PQSDLTPEKLAEKLLELLSD 324 (357)
T ss_pred CCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEE----------EcccCCHHHHHHHHHHHHcC
Confidence 762 689999999999999997653 23567777889987 6666 99999999999998
Q ss_pred hCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 554 ~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~ 585 (612)
++.+.+|++++. .+.++-+.+++.|+++..
T Consensus 325 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 325 --PERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred --HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 777778887764 577888888888877654
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-23 Score=217.74 Aligned_cols=322 Identities=14% Similarity=0.070 Sum_probs=201.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++.+ .||-......|+++|.++||+|++++.......+ . ....|+++
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~--------------------~--~~~~g~~~ 52 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKR--------------------L--VPKAGIEF 52 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhc--------------------c--cccCCCce
Confidence 789988765 3444445568999999999999999864221101 0 01136666
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.++...+... ........+..+...+.++.+.+. +.+|| +||+|.+...+..
T Consensus 53 ~~i~~~~~~~~-----------------~~~~~l~~~~~~~~~~~~l~~~i~---------~~~pD-vVi~~~~~~~~~~ 105 (348)
T TIGR01133 53 YFIPVGGLRRK-----------------GSFRLIKTPLKLLKAVFQARRILK---------KFKPD-AVIGFGGYVSGPA 105 (348)
T ss_pred EEEeccCcCCC-----------------ChHHHHHHHHHHHHHHHHHHHHHH---------hcCCC-EEEEcCCcccHHH
Confidence 66542211100 011111111112222222222222 23799 8999876655554
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
..+... .++|++++.|+..+ . ...+...+.+|.++++
T Consensus 106 ~~~~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~d~ii~~ 142 (348)
T TIGR01133 106 GLAAKL-------LGIPLFHHEQNAVP----------------------------------G--LTNKLLSRFAKKVLIS 142 (348)
T ss_pred HHHHHH-------cCCCEEEECCCCCc----------------------------------c--HHHHHHHHHhCeeEEC
Confidence 444443 46777644331100 0 1123346689999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+ +..+|+||+|...+.+... +++++++ ++.+
T Consensus 143 ~~~~~~~~-----------------~~~~i~n~v~~~~~~~~~~-----------------------~~~~~~~--~~~~ 180 (348)
T TIGR01133 143 FPGAKDHF-----------------EAVLVGNPVRQEIRSLPVP-----------------------RERFGLR--EGKP 180 (348)
T ss_pred chhHhhcC-----------------CceEEcCCcCHHHhcccch-----------------------hhhcCCC--CCCe
Confidence 99776654 2368999998766543210 2245665 3557
Q ss_pred EEEEEcCcccccCHHH-HHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 405 VIGFIGRLEEQKGSDI-LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~-ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
+|+++|+....|+... +++++..+.+.++++++++.+.+ .+.+++...+++ +...+.|.......+|+.||++|.
T Consensus 181 ~i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~--~~~l~~~~~~~~--l~~~v~~~~~~~~~~l~~ad~~v~ 256 (348)
T TIGR01133 181 TILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND--LEKVKNVYQELG--IEAIVTFIDENMAAAYAAADLVIS 256 (348)
T ss_pred EEEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch--HHHHHHHHhhCC--ceEEecCcccCHHHHHHhCCEEEE
Confidence 8999998888888654 56888888665677754443331 256666665554 333333433256689999999998
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCCC-------cccceecCceEEEecccccccCCCCCCC--HHHHHHHHHHHHHhh
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVASTGG-------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALATY 554 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg-------~~e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~l~~ll~~~ 554 (612)
+| + |++++|||++|+|+|+++.++ ..+++.++.+|+++ ++.| +++++++|.+++++
T Consensus 257 ~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~----------~~~~~~~~~l~~~i~~ll~~- 321 (348)
T TIGR01133 257 RA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVI----------RQKELLPEKLLEALLKLLLD- 321 (348)
T ss_pred CC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEE----------ecccCCHHHHHHHHHHHHcC-
Confidence 65 2 789999999999999998654 23578888999987 7765 99999999999987
Q ss_pred CHHHHHHHHHHH
Q 007224 555 GTQALAEMMKNG 566 (612)
Q Consensus 555 ~~~~~~~~~~~~ 566 (612)
++.+.+|++++
T Consensus 322 -~~~~~~~~~~~ 332 (348)
T TIGR01133 322 -PANLEAMAEAA 332 (348)
T ss_pred -HHHHHHHHHHH
Confidence 77777887776
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-22 Score=214.01 Aligned_cols=324 Identities=15% Similarity=0.070 Sum_probs=207.3
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
+|++.+.+ .||-..++..|+++|.++||+|++++.......+ .....|++++
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~----------------------~~~~~~~~~~ 52 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRGLEAR----------------------LVPKAGIPLH 52 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh----------------------cccccCCceE
Confidence 46666654 6888888889999999999999999876321111 0011356666
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+..+.+..+ ........+..+.+.+.++.+.+. +++|| +||+|.+...+...
T Consensus 53 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~i~---------~~~pD-vI~~~~~~~~~~~~ 105 (350)
T cd03785 53 TIPVGGLRRK-----------------GSLKKLKAPFKLLKGVLQARKILK---------KFKPD-VVVGFGGYVSGPVG 105 (350)
T ss_pred EEEecCcCCC-----------------ChHHHHHHHHHHHHHHHHHHHHHH---------hcCCC-EEEECCCCcchHHH
Confidence 5543211111 001111111112222222222221 23799 88888766554444
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
++.+. .++|++++.|+... . .+.+.....+|.++++|
T Consensus 106 ~~a~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~~~vi~~s 142 (350)
T cd03785 106 LAAKL-------LGIPLVIHEQNAVP----------------------------------G--LANRLLARFADRVALSF 142 (350)
T ss_pred HHHHH-------hCCCEEEEcCCCCc----------------------------------c--HHHHHHHHhhCEEEEcc
Confidence 44433 47888876553110 0 11233455699999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+ + ..++.+|+||+|.+.+.+.. . +++++++. +.++
T Consensus 143 ~~~~~~~--------~------~~~~~~i~n~v~~~~~~~~~----------------------~-~~~~~~~~--~~~~ 183 (350)
T cd03785 143 PETAKYF--------P------KDKAVVTGNPVREEILALDR----------------------E-RARLGLRP--GKPT 183 (350)
T ss_pred hhhhhcC--------C------CCcEEEECCCCchHHhhhhh----------------------h-HHhcCCCC--CCeE
Confidence 9877651 1 12889999999987664321 1 55666653 4578
Q ss_pred EEEEcCcccccCHH-HHHHHHHhcccCCcEE-EEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 406 IGFIGRLEEQKGSD-ILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 406 il~iGrl~~~Kg~d-~ll~a~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
++++|+....|+.+ .+++++..+.++++++ +++|+|. .+.+++...++..++...+.. +...++|+.||+++.
T Consensus 184 i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~---~~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~ 258 (350)
T cd03785 184 LLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD---LEEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVIS 258 (350)
T ss_pred EEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc---HHHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEE
Confidence 88888877777765 4568888886566764 4678773 344555555444456555443 456679999999998
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHHh
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~~ 553 (612)
+|- +++++|||++|+|+|+++.++ ..+.+.+..+|+++ ++. |+++++++|.+++++
T Consensus 259 ~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v----------~~~~~~~~~l~~~i~~ll~~ 324 (350)
T cd03785 259 RAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLI----------PQEELTPERLAAALLELLSD 324 (350)
T ss_pred CCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEE----------ecCCCCHHHHHHHHHHHhcC
Confidence 762 689999999999999987654 24667777899987 665 899999999999987
Q ss_pred hCHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNGM 567 (612)
Q Consensus 554 ~~~~~~~~~~~~~~ 567 (612)
++.+++|++++.
T Consensus 325 --~~~~~~~~~~~~ 336 (350)
T cd03785 325 --PERLKAMAEAAR 336 (350)
T ss_pred --HHHHHHHHHHHH
Confidence 677778877764
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-21 Score=209.00 Aligned_cols=220 Identities=13% Similarity=0.087 Sum_probs=158.7
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
.+.+|.++++|+..++.+.+ +|++.+ ++.++.|.++.. |.+..+ +..++++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~---~gi~~~------ki~v~G~p~~~~-f~~~~~-------------------~~~~~~~ 195 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVD---IGVPPE------QVVETGIPIRSS-FELKIN-------------------PDIIYNK 195 (380)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh------HEEEECcccChH-HcCcCC-------------------HHHHHHH
Confidence 45799999999999999986 677655 677766655432 222111 3346788
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHH
Q 007224 395 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 474 (612)
Q Consensus 395 ~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~ 474 (612)
+|++.+. ..++++.|++...|+++.+++++.+. ++++++++|.+....++.++++..+.+.++...+.. . ...++
T Consensus 196 ~~l~~~~-~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~-~-~~~~l 270 (380)
T PRK13609 196 YQLCPNK-KILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYV-E-NIDEL 270 (380)
T ss_pred cCCCCCC-cEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEech-h-hHHHH
Confidence 8887432 23555678888899999999988754 689998876444345677777776666557666433 2 35679
Q ss_pred HHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CCCcc----cceecCceEEEecccccccCCCCCCCHHHHHHHHHH
Q 007224 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 475 l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~----e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ 549 (612)
|+.||+++. ++.|++++|||+||+|+|+++ .+|.. +.+.+ +|+.+ ...|+++++++|.+
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~----------~~~~~~~l~~~i~~ 334 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAV----------VIRDDEEVFAKTEA 334 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEE----------EECCHHHHHHHHHH
Confidence 999999884 567999999999999999986 45532 23332 34433 45799999999999
Q ss_pred HHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHH
Q 007224 550 ALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~ 586 (612)
++++ ++.+.+|++++. .+.++++.+++.+++++..
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 335 LLQD--DMKLLQMKEAMKSLYLPEPADHIVDDILAENHV 371 (380)
T ss_pred HHCC--HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhh
Confidence 9998 677778877763 4668999999999888754
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-22 Score=229.82 Aligned_cols=319 Identities=17% Similarity=0.209 Sum_probs=215.8
Q ss_pred hhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCC
Q 007224 197 NQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA 276 (612)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~ 276 (612)
.+..|....+...+.+..+ +++|.+|..||+|..++|.+|+... .++++.|.+|. .||
T Consensus 126 ~w~~Y~~vN~~FA~~i~~~-----------~~~~d~vWvhDYhL~llp~~lR~~~------~~~~igfFlHi-----PFP 183 (797)
T PLN03063 126 QYDAYKKANRMFLDVVKEN-----------YEEGDVVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHT-----PFP 183 (797)
T ss_pred HHHHHHHHHHHHHHHHHHh-----------cCCCCEEEEecchhhhHHHHHHHhC------CCCcEEEEecC-----CCC
Confidence 3444555555544444332 2344499999999999999999875 78999999994 333
Q ss_pred cccc-cccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHcccc--CCccc--hhh---hhc
Q 007224 277 FEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNI---IRK 348 (612)
Q Consensus 277 ~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~~---~~~ 348 (612)
...+ ..+ .....+-.++..||.|-+.+..+++.+.+... .|.+. ..+ -+.
T Consensus 184 s~e~fr~l----------------------p~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~ 241 (797)
T PLN03063 184 SSEIYKTL----------------------PSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKV 241 (797)
T ss_pred CHHHHhhC----------------------CCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeE
Confidence 2211 111 01234456788999999999988887664111 12111 001 112
Q ss_pred cCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhc
Q 007224 349 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHF 428 (612)
Q Consensus 349 ~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l 428 (612)
.++.+||||||++.|.+.... .........+++.++ ++++|+++||+++.||++.+++|++++
T Consensus 242 ~~I~viP~GID~~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~l 304 (797)
T PLN03063 242 TRVAVFPIGIDPERFINTCEL------------PEVKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKF 304 (797)
T ss_pred EEEEEEecccCHHHHHHHhcC------------hhHHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHH
Confidence 478999999999988654210 000011223444443 457999999999999999999999998
Q ss_pred cc--CC----cEEEEEeC-----Cc--hhHHHHHHHHHHHCCCc--------eEEEe-ccChHHHHHHHHhcCEEEeCCC
Q 007224 429 IK--EN----VQIIVLGT-----GK--KPMEKQLEQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 429 ~~--~~----~~lvivG~-----g~--~~~~~~l~~l~~~~~~~--------i~~~~-~~~~~~~~~~l~~adi~l~pS~ 486 (612)
.+ ++ +.|++++. ++ ..++++++++....+.+ +.... ..+.+++..+|+.||++|+||.
T Consensus 305 L~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSl 384 (797)
T PLN03063 305 LEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSL 384 (797)
T ss_pred HHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCcc
Confidence 65 44 44554442 22 12445555554222111 11222 3466788889999999999999
Q ss_pred CCCCcHHHHHHHHcCCc----eEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007224 487 FEPCGLIQLHAMRYGTV----PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 562 (612)
Q Consensus 487 ~E~~gl~~lEAma~G~P----vI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~ 562 (612)
.||+|++.+|||+||+| +|+|..+|..+.+ +.+|+++ +|.|+++++++|.++++.+ ++.++++
T Consensus 385 rEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r 451 (797)
T PLN03063 385 RDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLV----------NPWNITEVSSAIKEALNMS-DEERETR 451 (797)
T ss_pred ccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHH
Confidence 99999999999999999 9999999998876 4468987 9999999999999999953 3333333
Q ss_pred HHHH--HHhcCCcHHHHHHHHHHHHHHHH
Q 007224 563 MKNG--MAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 563 ~~~~--~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
.+.. ....++|...++.+++.|+++..
T Consensus 452 ~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 452 HRHNFQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred HHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 2222 46789999999999998887764
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.3e-22 Score=228.64 Aligned_cols=297 Identities=17% Similarity=0.246 Sum_probs=205.5
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccc-cccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
++|.+|..||+|..++|.+++... .+.++.|.+|-. ||.... .. +|
T Consensus 132 ~~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~p-----fP~~~~f~~--lp-------------------- 178 (726)
T PRK14501 132 RPGDVVWVHDYQLMLLPAMLRERL------PDARIGFFLHIP-----FPSFEVFRL--LP-------------------- 178 (726)
T ss_pred CCCCEEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCC-----CCChHHHhh--CC--------------------
Confidence 354499999999999999998764 688999999943 332211 11 11
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHcccc--CCccchh--h-h--hccCeEEeeCCCccCccCCCCccccccccCcch
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN--I-I--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~--~-~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
....+-.++..+|.|-+-+..+.+.+.+... .+.+... + + +..++.++|||+|++.|.+....
T Consensus 179 ~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~---------- 248 (726)
T PRK14501 179 WREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQD---------- 248 (726)
T ss_pred ChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcC----------
Confidence 1234456778899999999888776554211 1211000 0 0 12368999999999998764210
Q ss_pred hhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCC-----c--hhHH
Q 007224 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTG-----K--KPME 446 (612)
Q Consensus 380 ~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~----~~~lvivG~g-----~--~~~~ 446 (612)
.......+.+++.. +++++|+++||+++.||++.+++|++++.+ + +++|+++|.+ + ..++
T Consensus 249 --~~~~~~~~~lr~~~-----~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~ 321 (726)
T PRK14501 249 --PEVQEEIRRLRQDL-----RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMK 321 (726)
T ss_pred --chHHHHHHHHHHHc-----CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHH
Confidence 00011122344443 255799999999999999999999999865 4 3789888743 1 2345
Q ss_pred HHHHHHHHHCC----C----ceEEE-eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHc-----CCceEEcCCCCc
Q 007224 447 KQLEQLEILYP----E----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY-----GTVPIVASTGGL 512 (612)
Q Consensus 447 ~~l~~l~~~~~----~----~i~~~-~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~-----G~PvI~s~~gg~ 512 (612)
++++++..+.+ . .+..+ ..++.+++..+|+.||++++||..||||++++|||+| |+||++...|+.
T Consensus 322 ~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~ 401 (726)
T PRK14501 322 REIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAA 401 (726)
T ss_pred HHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchh
Confidence 55555543322 1 12222 3457788889999999999999999999999999999 557777778888
Q ss_pred ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHH--HHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 513 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM--MKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 513 ~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~--~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
.+++ +|+++ +|.|+++++++|.+++.++..+....+ .++ ....|||+..++++++.|+++..
T Consensus 402 ~~l~----~~llv----------~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~-~v~~~~~~~w~~~~l~~l~~~~~ 465 (726)
T PRK14501 402 AELA----EALLV----------NPNDIEGIAAAIKRALEMPEEEQRERMQAMQE-RLRRYDVHKWASDFLDELREAAE 465 (726)
T ss_pred HHhC----cCeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHh
Confidence 8875 37876 999999999999999986433322222 222 24689999999999999998854
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-20 Score=201.93 Aligned_cols=222 Identities=16% Similarity=0.159 Sum_probs=162.4
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
.+++..++.+|.|+++|+...+.+.. ++ + ++.+|+||+|.+.|.+.....
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~---~~-~--------~i~~i~ngvd~~~f~~~~~~~------------------ 194 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR---LN-P--------NVVLVPNGVDYEHFAAARDPP------------------ 194 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh---CC-C--------CEEEcccccCHHHhhcccccC------------------
Confidence 56788899999999999999988875 33 2 799999999999887653210
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccCh
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~ 468 (612)
...+... ..+.++|+|+|++.+.++++.+.+++... ++++|+|+|.++... ....+. ...++.+.+..+.
T Consensus 195 ~~~~~~~----~~~~~~i~y~G~l~~~~d~~ll~~la~~~--p~~~~vliG~~~~~~--~~~~~~--~~~nV~~~G~~~~ 264 (373)
T cd04950 195 PPPADLA----ALPRPVIGYYGAIAEWLDLELLEALAKAR--PDWSFVLIGPVDVSI--DPSALL--RLPNVHYLGPKPY 264 (373)
T ss_pred CChhHHh----cCCCCEEEEEeccccccCHHHHHHHHHHC--CCCEEEEECCCcCcc--ChhHhc--cCCCEEEeCCCCH
Confidence 0000111 12458999999999988888777666543 789999999983111 112221 1245888888888
Q ss_pred HHHHHHHHhcCEEEeCCCC-----CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHH
Q 007224 469 PLAHMIIAGADFILIPSRF-----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 469 ~~~~~~l~~adi~l~pS~~-----E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~l 543 (612)
+++..+++.+|++++|+.. +++|++++|||+||+|||+|+.+.+.+ .+..+++ .+.|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~~~-----------~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEVVL-----------IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcEEE-----------eCCCHHHH
Confidence 8899999999999999864 368999999999999999998655443 3333443 45699999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 007224 544 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 544 a~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~ 586 (612)
+++|.+++.+...+...+ ..+ +.+.+||+..++++++.+++
T Consensus 331 ~~ai~~~l~~~~~~~~~~-~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 331 VAAIEKALLEDGPARERR-RLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHhcCCchHHHH-HHH-HHHHCCHHHHHHHHHHHHHh
Confidence 999999876643333322 222 67889999999999976654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.5e-21 Score=207.97 Aligned_cols=233 Identities=16% Similarity=0.125 Sum_probs=164.0
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
.+++..+..+|.|+++|+..++.+.+ .|++ .. +.+++|. +.+.+.+.. .....
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~---~g~~------~~-i~vi~n~-~~d~~~~~~----------------~~~~~ 222 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLA---LGAK------NE-VTVTGNL-KFDIEVPPE----------------LAARA 222 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCC------CC-cEecccc-cccCCCChh----------------hHHHH
Confidence 45566788899999999999999986 5654 12 6778884 332222110 01123
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCce------
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKA------ 460 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i------ 460 (612)
..++++++ + +.++++++|+. .|+.+.+++|+.++.+ ++++|+|+|.|+.. .+.++++.++.+...
T Consensus 223 ~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 223 ATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPER-FKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred HHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhh-HHHHHHHHHhCCCcEEEccCC
Confidence 45677766 3 44788888874 6789999999999865 79999999998732 245666666554211
Q ss_pred --------EEEeccChHHHHHHHHhcCEEEe-CCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecC-ceEEEecccc
Q 007224 461 --------RGVAKFNIPLAHMIIAGADFILI-PSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEG-FTGFQMGSFS 529 (612)
Q Consensus 461 --------~~~~~~~~~~~~~~l~~adi~l~-pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g-~~G~l~~~~~ 529 (612)
...+. ...++..+|+.||++++ +|..|++|.+++|||+||+|||+++. ++..|+++.. .+|+++
T Consensus 296 ~~~~~~~~v~l~~-~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~---- 370 (425)
T PRK05749 296 EPPSADTDVLLGD-TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAI---- 370 (425)
T ss_pred CCCCCCCcEEEEe-cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeE----
Confidence 11111 23456789999999665 67779999999999999999999864 6666665542 457766
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 530 VDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 530 ~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
.+.|+++++++|.+++++ ++.+.+|++++.+.--+.....+++.+++++.+
T Consensus 371 ------~~~d~~~La~~l~~ll~~--~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l 421 (425)
T PRK05749 371 ------QVEDAEDLAKAVTYLLTD--PDARQAYGEAGVAFLKQNQGALQRTLQLLEPYL 421 (425)
T ss_pred ------EECCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhc
Confidence 789999999999999997 677777877764211122477788888887655
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-20 Score=200.39 Aligned_cols=216 Identities=16% Similarity=0.131 Sum_probs=157.1
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
...+|.++++|+..++.+.+ +|++.+ ++.++++++|.+.+.+... +..++++
T Consensus 148 ~~~~d~~~~~s~~~~~~l~~---~g~~~~------ki~v~g~~v~~~f~~~~~~-------------------~~~~r~~ 199 (382)
T PLN02605 148 HKGVTRCFCPSEEVAKRALK---RGLEPS------QIRVYGLPIRPSFARAVRP-------------------KDELRRE 199 (382)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECcccCHhhccCCCC-------------------HHHHHHH
Confidence 45799999999999999886 677765 8889999988765443211 5668899
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc------cCCcE-EEEEeCCchhHHHHHHHHHHHCCCceEEEeccC
Q 007224 395 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI------KENVQ-IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 395 ~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~------~~~~~-lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~ 467 (612)
+|++. +.++|+++|+....|++..+++++.++. .++++ ++++|.+. ...+.++++.. ..++...+..
T Consensus 200 ~gl~~--~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~--~~~v~~~G~~- 273 (382)
T PLN02605 200 LGMDE--DLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDW--KIPVKVRGFV- 273 (382)
T ss_pred cCCCC--CCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcc--cCCeEEEecc-
Confidence 99974 4589999999999999999999998753 35676 56777664 34555555422 2335544433
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC------CCcccceecCceEEEecccccccCCCCCCCHH
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST------GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~------gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 541 (612)
+.++++|+.||++|.++ .|++++|||+||+|+|+++. |+. +.+.+++.|+. ..|++
T Consensus 274 -~~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~------------~~~~~ 335 (382)
T PLN02605 274 -TNMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAF------------SESPK 335 (382)
T ss_pred -ccHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceee------------cCCHH
Confidence 34678999999999855 58899999999999999984 444 34445556764 37999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHH
Q 007224 542 AVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEET 583 (612)
Q Consensus 542 ~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~ 583 (612)
+++++|.+++.+ +++.+++|++++. ....+.+.+++.+.++
T Consensus 336 ~la~~i~~ll~~-~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 336 EIARIVAEWFGD-KSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 999999999986 2456777777763 3455666666655544
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.2e-21 Score=181.87 Aligned_cols=164 Identities=27% Similarity=0.444 Sum_probs=139.4
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc---cCCcEEEEEeCCchhHHHHHHHHHHHCC--CceEE
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI---KENVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 462 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~---~~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~ 462 (612)
++.++...+.+ ++.++|+|+||+.+.||++.+++++..+. .++++++|+|.+. +...++.+...++ .++.+
T Consensus 2 ~~~~~~~~~~~--~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIP--DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCC--CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--cccccccccccccccccccc
Confidence 45666776665 35689999999999999999999999996 4799999999766 5556666666544 46888
Q ss_pred EeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHH
Q 007224 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 542 (612)
.+..+.+.+..+|+.||++++||..|+||++++|||+||+|||+++.|+..|++.++.+|+++ ++.|+++
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~ 147 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLF----------DPNDIEE 147 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEE----------STTSHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEe----------CCCCHHH
Confidence 877777788899999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHH
Q 007224 543 VSTTVRRALATYGTQALAEMMKNGM 567 (612)
Q Consensus 543 la~~l~~ll~~~~~~~~~~~~~~~~ 567 (612)
++++|.+++++ ++.+..|++++.
T Consensus 148 l~~~i~~~l~~--~~~~~~l~~~~~ 170 (172)
T PF00534_consen 148 LADAIEKLLND--PELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--HHHHHHHHHHhc
Confidence 99999999999 677788887764
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-20 Score=198.90 Aligned_cols=242 Identities=18% Similarity=0.177 Sum_probs=178.2
Q ss_pred HHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHH
Q 007224 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 314 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~ 393 (612)
....+|++++.|...+..+.. .... + ....+.+.+.++|.+.+.+.- | +.+...+...+.
T Consensus 206 ~~~~~~~~~~ns~~~~~~f~~-~~~~--L----~~~d~~~~y~ei~~s~~~~~~-------~------~~~~~~~~~~r~ 265 (495)
T KOG0853|consen 206 TTGLAWKILVNSYFTKRQFKA-TFVS--L----SNSDITSTYPEIDGSWFTYGQ-------Y------ESHLELRLPVRL 265 (495)
T ss_pred hhhccceEecchhhhhhhhhh-hhhh--c----CCCCcceeeccccchhccccc-------c------ccchhcccccce
Confidence 355789999999888887775 1111 1 122588888899988776521 0 011111222233
Q ss_pred HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-------CCcEEEEEeCC--------chhHHHHHHHHHHHCCC
Q 007224 394 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTG--------KKPMEKQLEQLEILYPE 458 (612)
Q Consensus 394 ~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~-------~~~~lvivG~g--------~~~~~~~l~~l~~~~~~ 458 (612)
+.+.. .....+.-+.|+++.|+++++++++.++.. .+.+++++|+. +..+.+.+.++.++++.
T Consensus 266 ~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 266 YRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred eeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 33332 234678889999999999999999998865 36788999842 13567788888888852
Q ss_pred --ceEEE-eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCC
Q 007224 459 --KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 459 --~i~~~-~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v 535 (612)
+...+ ...+......+++.+.+.+.....|+||++.+|||+||+|||+++.||..|+|.++.|||++
T Consensus 344 ~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~---------- 413 (495)
T KOG0853|consen 344 LGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLI---------- 413 (495)
T ss_pred cCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceee----------
Confidence 34433 34455555567788888877777799999999999999999999999999999999999987
Q ss_pred CCCCHH---HHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 536 DPVDVA---AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 536 ~~~d~~---~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
+| +.+ .+++++.++..+ ++.+.+|++++ +.+.|||+.+.+++.++..+....
T Consensus 414 dp-~~e~~~~~a~~~~kl~~~--p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~~~ 471 (495)
T KOG0853|consen 414 DP-GQEAVAELADALLKLRRD--PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYLQW 471 (495)
T ss_pred CC-chHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcCCc
Confidence 88 666 699999999998 66677777666 578899999999999988866543
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.8e-20 Score=197.60 Aligned_cols=222 Identities=14% Similarity=0.108 Sum_probs=157.9
Q ss_pred HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHh
Q 007224 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 395 (612)
..+|.+++.|+..++.+.+ .|++.+ ++.++.|+++.....+. + +..++.++
T Consensus 146 ~~~d~~~v~s~~~~~~l~~---~gi~~~------ki~v~GiPv~~~f~~~~-~-------------------~~~~~~~~ 196 (391)
T PRK13608 146 PYSTRYYVATKETKQDFID---VGIDPS------TVKVTGIPIDNKFETPI-D-------------------QKQWLIDN 196 (391)
T ss_pred CCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECeecChHhcccc-c-------------------HHHHHHHc
Confidence 4789999999999999986 677655 78887777764332211 1 44567788
Q ss_pred CCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007224 396 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 396 gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l 475 (612)
|++.+ ...++++.|++...||++.+++++.+. .+++++++++.+++...+.+++.... ..++...+ +. +.++++|
T Consensus 197 ~l~~~-~~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~~-~~~v~~~G-~~-~~~~~~~ 271 (391)
T PRK13608 197 NLDPD-KQTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFKS-NENVLILG-YT-KHMNEWM 271 (391)
T ss_pred CCCCC-CCEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhcc-CCCeEEEe-cc-chHHHHH
Confidence 88743 224566789999899999999986432 26789876654343333444433222 23454443 43 3467899
Q ss_pred HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 476 ~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
+.||++|. ++.|++++|||++|+|+|+++. +| ..+.+.+.+.|+. ..|.++++++|.++
T Consensus 272 ~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~------------~~~~~~l~~~i~~l 335 (391)
T PRK13608 272 ASSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI------------ADTPEEAIKIVASL 335 (391)
T ss_pred HhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE------------eCCHHHHHHHHHHH
Confidence 99999996 4579999999999999999974 33 1123334555654 46999999999999
Q ss_pred HHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHHH
Q 007224 551 LATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+++ ++.+.+|++++. .+.++++.+++++++++..+..
T Consensus 336 l~~--~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 336 TNG--NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred hcC--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 987 677888888874 5679999999999999876654
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=177.21 Aligned_cols=118 Identities=28% Similarity=0.443 Sum_probs=95.6
Q ss_pred EEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHHHHHHhcCEEEeC
Q 007224 408 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIAGADFILIP 484 (612)
Q Consensus 408 ~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~~~l~~adi~l~p 484 (612)
|+|++.++||++.+++++..+.+ ++++++++|.+.+...............++.....+ ..+....+++.||++++|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~ 188 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLP 188 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEec
Confidence 99999999999999999999976 599999999987432221111122233457766665 455666677779999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEe
Q 007224 485 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 525 (612)
Q Consensus 485 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~ 525 (612)
|..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 189 ~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 189 SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 99999999999999999999999999999999999999863
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=7e-19 Score=190.48 Aligned_cols=292 Identities=16% Similarity=0.153 Sum_probs=205.9
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccc-cccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
++|.+|-.||+|..++|.+|+... .+.++-|.+|. .||..++ ..+ .
T Consensus 131 ~~~d~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHi-----PFPs~eifr~L----------------------P 177 (487)
T TIGR02398 131 AEGATVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHT-----PFPSADVFNIL----------------------P 177 (487)
T ss_pred CCCCEEEEecchhhHHHHHHHHhC------CCCeEEEEeeC-----CCCChHHHhhC----------------------C
Confidence 355599999999999999999864 68899999993 3432211 111 1
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHcccc--CCccchh-----------------------h---hhccCeEEeeCCC
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----------------------I---IRKTGIKGIVNGM 358 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-----------------------~---~~~~~i~vI~Ngv 358 (612)
....+-.++..+|.|-+.+..+++.+.+... .|.+... + =+...+.++|.||
T Consensus 178 ~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGI 257 (487)
T TIGR02398 178 WREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGT 257 (487)
T ss_pred chHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEe
Confidence 2234556788999999999998877654211 1211100 0 0223589999999
Q ss_pred ccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----C
Q 007224 359 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----N 432 (612)
Q Consensus 359 d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~----~ 432 (612)
|++.|.+.... .......+.++++++ ++++|++++|+++.||++..++|++++.+ | +
T Consensus 258 D~~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gk 320 (487)
T TIGR02398 258 DPERIRSALAA------------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGK 320 (487)
T ss_pred cHHHHHHHhcC------------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCc
Confidence 99988654210 011122455787776 45799999999999999999999999865 4 5
Q ss_pred cEEEEEeCCc-------hhHHHHHHHHHHHCCC---------ceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHH
Q 007224 433 VQIIVLGTGK-------KPMEKQLEQLEILYPE---------KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLH 496 (612)
Q Consensus 433 ~~lvivG~g~-------~~~~~~l~~l~~~~~~---------~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lE 496 (612)
+.|+++|.+. ..+++++++++.+.+. .+.....++.+++..+|+.||++++||..||++++..|
T Consensus 321 v~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~E 400 (487)
T TIGR02398 321 VTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKE 400 (487)
T ss_pred eEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhh
Confidence 7899998864 2356667776655321 12233344778888899999999999999999999999
Q ss_pred HHHcCC----ceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhcC
Q 007224 497 AMRYGT----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDL 571 (612)
Q Consensus 497 Ama~G~----PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~-~~~~~ 571 (612)
+++|+. |+|.|..+|..+.+. .++++ .|.|++++|++|.++++++..++..++.+.. ....+
T Consensus 401 yva~~~~~~GvLILSefaGaa~~l~---~AllV----------NP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~ 467 (487)
T TIGR02398 401 YVAAQGLLDGVLVLSEFAGAAVELK---GALLT----------NPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYY 467 (487)
T ss_pred HHhhhcCCCCCEEEeccccchhhcC---CCEEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhC
Confidence 999988 999999999887764 36766 9999999999999999986444434333222 23455
Q ss_pred CcHHHHHHHHH
Q 007224 572 SWKGPAKKWEE 582 (612)
Q Consensus 572 sw~~~a~~~~~ 582 (612)
+-..-++.+++
T Consensus 468 d~~~W~~~fl~ 478 (487)
T TIGR02398 468 DVQRWADEFLA 478 (487)
T ss_pred CHHHHHHHHHH
Confidence 55544555443
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-17 Score=176.31 Aligned_cols=218 Identities=17% Similarity=0.118 Sum_probs=144.7
Q ss_pred HHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHH
Q 007224 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 314 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~ 393 (612)
..+.+|.++++|+..++.+.+ +|. ++.++.|.+..... +.. .+..+++
T Consensus 131 ~~~~~d~i~~~~~~~~~~~~~---~g~---------~~~~~G~p~~~~~~-~~~-------------------~~~~~~~ 178 (380)
T PRK00025 131 IAKATDHVLALFPFEAAFYDK---LGV---------PVTFVGHPLADAIP-LLP-------------------DRAAARA 178 (380)
T ss_pred HHHHHhhheeCCccCHHHHHh---cCC---------CeEEECcCHHHhcc-ccc-------------------ChHHHHH
Confidence 466889999999988888764 332 24444444432211 100 1456778
Q ss_pred HhCCCCCCCCcEE-EEEc-Ccccc-cCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHC-CCceEEEeccC
Q 007224 394 EVGLPVDRNIPVI-GFIG-RLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFN 467 (612)
Q Consensus 394 ~~gl~~~~~~~~i-l~iG-rl~~~-Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~-~~~i~~~~~~~ 467 (612)
++|++.+ .+++ ++.| |..+. +..+.++++++.+.+ ++++++++|.+. ...+.++++..+. +..+.. +.
T Consensus 179 ~l~~~~~--~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~v~~---~~ 252 (380)
T PRK00025 179 RLGLDPD--ARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-KRREQIEEALAEYAGLEVTL---LD 252 (380)
T ss_pred HcCCCCC--CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh-hhHHHHHHHHhhcCCCCeEE---Ec
Confidence 8888643 3554 4445 44444 457899999998854 589999987633 2455566665555 322322 22
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc-----------------CCCCcccceecCc--eEEEeccc
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-----------------STGGLVDTVEEGF--TGFQMGSF 528 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s-----------------~~gg~~e~v~~g~--~G~l~~~~ 528 (612)
+.+..+|+.||++|.+| |.+.+|||++|+|+|++ +.+++++++.++. .+++
T Consensus 253 -~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---- 322 (380)
T PRK00025 253 -GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELL---- 322 (380)
T ss_pred -ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhc----
Confidence 34667999999999987 88999999999999987 4566777777654 3454
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHH
Q 007224 529 SVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 529 ~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
++..|++++++.+.++++| ++.+++|++++ ..+.. -...+++..+.+.++.
T Consensus 323 ------~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 323 ------QEEATPEKLARALLPLLAD--GARRQALLEGFTELHQQL-RCGADERAAQAVLELL 375 (380)
T ss_pred ------CCCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 3778999999999999998 77777777765 22333 3335566666555544
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.2e-17 Score=171.15 Aligned_cols=215 Identities=17% Similarity=0.160 Sum_probs=144.6
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~ 393 (612)
.+.+|.++++|+..++.+.+ .|++.+ ++.+++|++ |...+.+... .....++
T Consensus 139 ~~~ad~~~~~s~~~~~~l~~---~G~~~~------kI~vign~v~d~~~~~~~~~------------------~~~~~~~ 191 (363)
T cd03786 139 DKLSDLHFAPTEEARRNLLQ---EGEPPE------RIFVVGNTMIDALLRLLELA------------------KKELILE 191 (363)
T ss_pred HHHhhhccCCCHHHHHHHHH---cCCCcc------cEEEECchHHHHHHHHHHhh------------------ccchhhh
Confidence 45789999999999999886 677755 899999985 5433221110 0112245
Q ss_pred HhCCCCCCCCcEEEEEcCccc---ccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCC---CceEEEeccC
Q 007224 394 EVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKFN 467 (612)
Q Consensus 394 ~~gl~~~~~~~~il~iGrl~~---~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~---~~i~~~~~~~ 467 (612)
+++++ ++..++++.||... .|+++.+++++.++.+.++.+++.|.+. ..+.+++...++. .++.+.....
T Consensus 192 ~~~~~--~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~~~~~~~~~~~~v~~~~~~~ 267 (363)
T cd03786 192 LLGLL--PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIREAGLEFLGHHPNVLLISPLG 267 (363)
T ss_pred hcccC--CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHHHHHhhccCCCCEEEECCcC
Confidence 66765 23357778999875 7999999999999855456666666554 4455665555442 3455554344
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCCCCCHHHHHHH
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~ 546 (612)
.+.+..+++.||++|.+|- | ++.|||++|+|+|+++. +..++.+++|. ++. ...|+++++++
T Consensus 268 ~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~-~~~-----------~~~~~~~i~~~ 330 (363)
T cd03786 268 YLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESGT-NVL-----------VGTDPEAILAA 330 (363)
T ss_pred HHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhheee-EEe-----------cCCCHHHHHHH
Confidence 5667789999999999984 4 57999999999999975 44666666543 332 22379999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q 007224 547 VRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 583 (612)
Q Consensus 547 l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~ 583 (612)
|.+++++ +.....|. ...|.-...+++..++
T Consensus 331 i~~ll~~--~~~~~~~~----~~~~~~~~a~~~I~~~ 361 (363)
T cd03786 331 IEKLLSD--EFAYSLMS----INPYGDGNASERIVEI 361 (363)
T ss_pred HHHHhcC--chhhhcCC----CCCCCCCHHHHHHHHH
Confidence 9999987 44444443 2344444445555444
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-16 Score=166.34 Aligned_cols=185 Identities=16% Similarity=0.099 Sum_probs=134.5
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHH
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
..+++..++.+|.++++|+.+++.+.+ .|++.+ ++.+++|..+.....+.
T Consensus 114 ~~~~~~~~~~aD~iI~~S~~~~~~l~~---~g~~~~------~i~~~~~~~~~~~~~~~--------------------- 163 (333)
T PRK09814 114 MKEEIDMLNLADVLIVHSKKMKDRLVE---EGLTTD------KIIVQGIFDYLNDIELV--------------------- 163 (333)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcC------ceEeccccccccccccc---------------------
Confidence 466788899999999999999999986 566433 56666554433111100
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccC
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~ 467 (612)
. ..+..+.|+|+|++....+ +. . ..++++|+|+|+|+... ....++.+.+.++
T Consensus 164 -----~-----~~~~~~~i~yaG~l~k~~~----l~---~-~~~~~~l~i~G~g~~~~---------~~~~~V~f~G~~~ 216 (333)
T PRK09814 164 -----K-----TPSFQKKINFAGNLEKSPF----LK---N-WSQGIKLTVFGPNPEDL---------ENSANISYKGWFD 216 (333)
T ss_pred -----c-----cccCCceEEEecChhhchH----HH---h-cCCCCeEEEECCCcccc---------ccCCCeEEecCCC
Confidence 0 0123468999999994332 11 1 23679999999997321 2335688888889
Q ss_pred hHHHHHHHHhcCEEEeCCCC-----------CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCC
Q 007224 468 IPLAHMIIAGADFILIPSRF-----------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~-----------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~ 536 (612)
.+++..+|+. |+.+++... -++|.++.|+|+||+|||+++.+++.|+|+++.+|+++ +
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v----------~ 285 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVV----------D 285 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEe----------C
Confidence 9999888888 766664321 25789999999999999999999999999999999987 4
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 007224 537 PVDVAAVSTTVRRALATYGTQALAEMMKNG 566 (612)
Q Consensus 537 ~~d~~~la~~l~~ll~~~~~~~~~~~~~~~ 566 (612)
+.+++++.+..+. .+.+.+|++++
T Consensus 286 --~~~el~~~l~~~~----~~~~~~m~~n~ 309 (333)
T PRK09814 286 --SLEELPEIIDNIT----EEEYQEMVENV 309 (333)
T ss_pred --CHHHHHHHHHhcC----HHHHHHHHHHH
Confidence 7889999998853 34566777766
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.7e-17 Score=172.96 Aligned_cols=442 Identities=19% Similarity=0.245 Sum_probs=227.3
Q ss_pred EeccccCccccccHHHHhhhhHHHHHh-CCCeEEEEeecCCcccccCCccEEE-EE----------EeCCeeeEEEEEEe
Q 007224 90 VGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPRYDQYKDAWDTDVVI-EL----------KVGDKIEKVRFFHC 157 (612)
Q Consensus 90 v~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~ 157 (612)
+++|+.- |.||+=+++..-|+.+++ .|.+..+|-|...+.. .+.... +. .....--.+++.+.
T Consensus 2 ~sWEVcN--KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~---~~e~e~~e~~~~~l~~~~~~~~~~Gl~v~~GRW 76 (633)
T PF05693_consen 2 VSWEVCN--KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNA---RTEVEEIEPDNPLLKDALESMREEGLKVRYGRW 76 (633)
T ss_dssp EETTTTS---SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTH---HHHEEE--SSSGGHHHHHHHHHHTT-EEEEEEE
T ss_pred chhhhcc--ccCCeehhhhccHHHHHHHHCCeEEEECCCCCccc---CCCCCcCCCCCHHHHHHHHHHHhCCCeEEEece
Confidence 3444433 689999999998888774 4889999988643211 000000 00 00000123566677
Q ss_pred eecCceEEEE-eChhhhhh------hhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCc
Q 007224 158 HKRGVDRVFV-DHPWFLAK------VVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGED 230 (612)
Q Consensus 158 ~~~gv~~~~l-~~~~~~~~------~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pD 230 (612)
.++|.+++.+ |...++.+ -.|...+ +-.+..+.+|. ....|...+..+++.+...... ++.
T Consensus 77 lI~G~P~vIL~D~~s~~~~ldeik~~lW~~~g--IdS~~~~~dyn-ea~~Fgyava~fi~~f~~~~~~---------~~~ 144 (633)
T PF05693_consen 77 LIPGRPIVILFDFGSFFWKLDEIKGELWELFG--IDSPHGDGDYN-EAVMFGYAVAWFIEEFYKFYEE---------KPK 144 (633)
T ss_dssp SSTT--EEEEEEGGGGGGGHHHHHHHHHHHH-------TT-HHHH-HHHHHHHHHHHHHHHHHHH-S----------SEE
T ss_pred eECCcCeEEEEeCchHHHHHHHHHHHHHHHcC--CCCCCCCcchh-HHHHHHHHHHHHHHHHHHhhcC---------CCc
Confidence 7888877765 43322211 1454332 11111111222 2233444444455444433211 478
Q ss_pred EEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCC---CcCCcc
Q 007224 231 VVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK---PVRGRK 307 (612)
Q Consensus 231 vvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~ 307 (612)
||.|+|+|+++....+++... ..+..|||.|.+.. ||+- .+-...+...+...++-.. +-..-+
T Consensus 145 ViaHfHEWmaG~gll~lr~~~------~~VaTvFTTHAT~l-GR~l------~~~~~~~Y~~L~~~~~d~eA~~~~i~~k 211 (633)
T PF05693_consen 145 VIAHFHEWMAGVGLLYLRKRK------PDVATVFTTHATLL-GRYL------AANNKDFYNNLDKFNGDQEAGERNIYHK 211 (633)
T ss_dssp EEEEEESGGGTTHHHHHHHTT-------SCEEEEEESS-HH-HHHH------TTTSS-TTTSGTTS-HHHHHHHTT-HHH
T ss_pred EEEEechHhHhHHHHHHhccC------CCeeEEEEecccch-hhHh------hcCCCcHHHHhhccCccccccCccchHH
Confidence 899999999999888888764 68999999997654 4430 0001111111111010000 000123
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHH
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
...++.+...||.+.|||+-.+.+-.. ++.+..=.|+|||++++.|..... + ..-+...
T Consensus 212 ~~iEraaA~~AdvFTTVSeITa~Ea~~----------LL~r~pDvV~pNGl~v~~~~~~~e-f----------qnl~~~~ 270 (633)
T PF05693_consen 212 HSIERAAAHYADVFTTVSEITAKEAEH----------LLKRKPDVVTPNGLNVDKFPALHE-F----------QNLHAKA 270 (633)
T ss_dssp HHHHHHHHHHSSEEEESSHHHHHHHHH----------HHSS--SEE----B-GGGTSSTTH-H----------HHHHHHH
T ss_pred HHHHHHHHHhcCeeeehhhhHHHHHHH----------HhCCCCCEEcCCCccccccccchH-H----------HHHHHHH
Confidence 567788899999999999998887652 222224477899999987754321 0 0112233
Q ss_pred HHHHH----HHh-C-CCCCC-CCcEEEEEcCcc-cccCHHHHHHHHHhccc------CCcE---EEEEeCCc-----h--
Q 007224 388 KEALQ----AEV-G-LPVDR-NIPVIGFIGRLE-EQKGSDILAAAIPHFIK------ENVQ---IIVLGTGK-----K-- 443 (612)
Q Consensus 388 k~~l~----~~~-g-l~~~~-~~~~il~iGrl~-~~Kg~d~ll~a~~~l~~------~~~~---lvivG~g~-----~-- 443 (612)
|+.++ ..+ | +.-+. +..+|...||++ .+||+|.+|+|+.+|.. .+.. |+|+=... +
T Consensus 271 k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l 350 (633)
T PF05693_consen 271 KEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESL 350 (633)
T ss_dssp HHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHH
T ss_pred HHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHH
Confidence 43333 222 2 12222 344566689999 69999999999999843 1322 33433210 0
Q ss_pred -------hHH-------H------------------------------------------------------------HH
Q 007224 444 -------PME-------K------------------------------------------------------------QL 449 (612)
Q Consensus 444 -------~~~-------~------------------------------------------------------------~l 449 (612)
..+ + .+
T Consensus 351 ~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~i 430 (633)
T PF05693_consen 351 KGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMI 430 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHH
Confidence 000 0 00
Q ss_pred HHHHHHC----CCceEEEeccC-h------HHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec
Q 007224 450 EQLEILY----PEKARGVAKFN-I------PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 518 (612)
Q Consensus 450 ~~l~~~~----~~~i~~~~~~~-~------~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 518 (612)
+++...+ ..+++++..|. + -...+++.+||+.|+||.+||+|.+.+|+.++|+|.|+|+..|+...+.+
T Consensus 431 rr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~ 510 (633)
T PF05693_consen 431 RRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQE 510 (633)
T ss_dssp HHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHT
T ss_pred HhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHH
Confidence 0000000 11333333331 0 11236899999999999999999999999999999999999887655543
Q ss_pred -----CceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh---CHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHH
Q 007224 519 -----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY---GTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 519 -----g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~---~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
...|+.+=.. ...+.++.++.|.+.+.+. .+..+..+..++ +++..+|+....-|.+.|+.++
T Consensus 511 ~~~~~~~~GV~VvdR-------~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL 583 (633)
T PF05693_consen 511 HIEDPEEYGVYVVDR-------RDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLAL 583 (633)
T ss_dssp TS-HHGGGTEEEE-S-------SSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHH
T ss_pred hhccCcCCcEEEEeC-------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3456655111 2345666666665555432 123333333333 5799999999999999998776
Q ss_pred H
Q 007224 589 V 589 (612)
Q Consensus 589 ~ 589 (612)
.
T Consensus 584 ~ 584 (633)
T PF05693_consen 584 R 584 (633)
T ss_dssp H
T ss_pred H
Confidence 4
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.5e-17 Score=171.52 Aligned_cols=199 Identities=20% Similarity=0.160 Sum_probs=139.7
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHHHHHHHHHh
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 395 (612)
.+|.++++|+..++.+.+ .|++.+ ++.+++|++ |...+.+.. .....+++++
T Consensus 141 ~ad~~~~~s~~~~~~l~~---~G~~~~------~I~vign~~~d~~~~~~~~------------------~~~~~~~~~~ 193 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLR---ENVKAD------SIFVTGNTVIDALLTNVEI------------------AYSSPVLSEF 193 (365)
T ss_pred HHHhccCCCHHHHHHHHH---cCCCcc------cEEEeCChHHHHHHHHHhh------------------ccchhHHHhc
Confidence 589999999999999986 687765 899999996 432221110 0123445566
Q ss_pred CCCCCCCCcEEEEEc-Ccc-cccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007224 396 GLPVDRNIPVIGFIG-RLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 396 gl~~~~~~~~il~iG-rl~-~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~ 471 (612)
+. +.+++++.+ |.+ ..|+++.+++|+.++.+ +++++++.|.++......+.+.. ....++...........
T Consensus 194 ~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 268 (365)
T TIGR00236 194 GE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLDF 268 (365)
T ss_pred CC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHHH
Confidence 52 224555555 543 45899999999999854 58899988665433333333322 22235666655555556
Q ss_pred HHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 472 ~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
..+++.||+++.+| |..++|||+||+|+|++ +.|+..|++.++ .++++ +.|++++++++.++
T Consensus 269 ~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-----------~~d~~~i~~ai~~l 331 (365)
T TIGR00236 269 LNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-----------GTDKENITKAAKRL 331 (365)
T ss_pred HHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-----------CCCHHHHHHHHHHH
Confidence 67999999999887 66789999999999996 678888888766 45543 47999999999999
Q ss_pred HHhhCHHHHHHHHHHH
Q 007224 551 LATYGTQALAEMMKNG 566 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~ 566 (612)
+++ ++.+.+++++.
T Consensus 332 l~~--~~~~~~~~~~~ 345 (365)
T TIGR00236 332 LTD--PDEYKKMSNAS 345 (365)
T ss_pred HhC--hHHHHHhhhcC
Confidence 987 66666665543
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-16 Score=181.94 Aligned_cols=298 Identities=17% Similarity=0.218 Sum_probs=201.9
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCccc-ccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
++|.+|.+||+|..++|.+|+... .++++.|.+|. .||... |..+ .
T Consensus 230 ~~gD~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHi-----PFPs~Eifr~L----------------------P 276 (934)
T PLN03064 230 EEGDVVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHT-----PFPSSEIHRTL----------------------P 276 (934)
T ss_pred CCCCEEEEecchhhHHHHHHHHhC------CCCcEEEEecC-----CCCChHHHhhC----------------------C
Confidence 454499999999999999999875 78999999993 343221 1111 1
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHcccc--CCccc--hhhh---hccCeEEeeCCCccCccCCCCccccccccCcch
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~~~---~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
...-+-.++..||.|-+.+..+++.+.+... .|.+. ..+. +..++.++|-|||++.|......
T Consensus 277 ~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~---------- 346 (934)
T PLN03064 277 SRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET---------- 346 (934)
T ss_pred cHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC----------
Confidence 1234456788999999999999887664211 12211 1110 12357788999999888643210
Q ss_pred hhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CC----cEEEEEeC-----Cc--hhHH
Q 007224 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGT-----GK--KPME 446 (612)
Q Consensus 380 ~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~----~~lvivG~-----g~--~~~~ 446 (612)
..-....+.++++++ ++.+|+.++|++..||+...++|++++.+ |+ +.|+.+.. ++ ..++
T Consensus 347 --~~v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~ 419 (934)
T PLN03064 347 --PQVQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLT 419 (934)
T ss_pred --hhHHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHH
Confidence 001112345676665 45799999999999999999999998754 44 33443332 22 1234
Q ss_pred HHHHHHHHH----CCC----ceEEEe-ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCC----ceEEcCCCCcc
Q 007224 447 KQLEQLEIL----YPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT----VPIVASTGGLV 513 (612)
Q Consensus 447 ~~l~~l~~~----~~~----~i~~~~-~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~----PvI~s~~gg~~ 513 (612)
.++.++..+ ++. -+.... .++.+++..+|+.||++|+||..||++++..|+|+|+. ++|.|...|..
T Consensus 420 ~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa 499 (934)
T PLN03064 420 SQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAA 499 (934)
T ss_pred HHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchH
Confidence 445554443 321 022222 24677778899999999999999999999999999944 45558888888
Q ss_pred cceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHH
Q 007224 514 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 514 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+.+ +..++++ .|.|+++++++|.+++..+ .+.++++.++. ....+||...++.+++-+....
T Consensus 500 ~~L--~~~AllV----------NP~D~~~vA~AI~~AL~M~-~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 500 QSL--GAGAILV----------NPWNITEVAASIAQALNMP-EEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred HHh--CCceEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence 777 3357876 9999999999999999863 33334333333 3577899999998887777664
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.2e-15 Score=157.14 Aligned_cols=223 Identities=28% Similarity=0.444 Sum_probs=168.6
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhC
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 396 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g 396 (612)
..+.+++.+......+.. ... ..++..++|+++...+.+. ...
T Consensus 150 ~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~---------------------------~~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEA---LGV-------PNKIVVIPNGIDTEKFAPA---------------------------RIG 192 (381)
T ss_pred cccEEEECCHHHHHHHHH---hCC-------CCCceEecCCcCHHHcCcc---------------------------ccC
Confidence 378889999887555543 111 1157889999998877642 011
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccC--CcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHH
Q 007224 397 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAH 472 (612)
Q Consensus 397 l~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~ 472 (612)
+..+.....++++||+.+.||++.+++++..+... ++.++++|.+... ...+..+..+.. .++.+.+..+.+...
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFLGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEecccCHHHHH
Confidence 11111136899999999999999999999999763 4899999998853 233333444443 346665555645666
Q ss_pred HHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 473 ~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
.+++.||++++||.+|+||++++|||++|+|||+++.++..|++.++.+|+++ .+.|.+++++++..+++
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~i~~~~~ 341 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV----------PPGDVEELADALEQLLE 341 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEec----------CCCCHHHHHHHHHHHhc
Confidence 68999999999999999999999999999999999999999999998778854 66689999999999998
Q ss_pred hhCHHHHHHHHH---HHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMK---NGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 553 ~~~~~~~~~~~~---~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+. +.+..+.+ +.....|+|+..++++.+++..+..
T Consensus 342 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 342 DP--ELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred CH--HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 83 33444443 2234799999999999999988753
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.1e-15 Score=150.07 Aligned_cols=223 Identities=15% Similarity=0.146 Sum_probs=167.8
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
-..||.+++.|.+..+.+.+ .++.. ..++++...+++.+ .+.
T Consensus 220 G~~ad~vm~NssWT~nHI~q--iW~~~--------~~~iVyPPC~~e~l----------------------------ks~ 261 (465)
T KOG1387|consen 220 GSKADIVMTNSSWTNNHIKQ--IWQSN--------TCSIVYPPCSTEDL----------------------------KSK 261 (465)
T ss_pred cccceEEEecchhhHHHHHH--Hhhcc--------ceeEEcCCCCHHHH----------------------------HHH
Confidence 34789999999999888775 23321 56667666665433 333
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHH-HHHHHHHhccc------CCcEEEEEeCCc----hhHHHHHHHHHHHCC--CceE
Q 007224 395 VGLPVDRNIPVIGFIGRLEEQKGSD-ILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILYP--EKAR 461 (612)
Q Consensus 395 ~gl~~~~~~~~il~iGrl~~~Kg~d-~ll~a~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~~--~~i~ 461 (612)
.+- .+.+.+.++++|.+.|.|++. +-++|+-.... .+++|+|+|+-. .+.-+.++.++.++. .++.
T Consensus 262 ~~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~ 340 (465)
T KOG1387|consen 262 FGT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQ 340 (465)
T ss_pred hcc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceE
Confidence 333 334668999999999999999 33445444433 479999999942 344566677776654 5677
Q ss_pred EEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc-cceec---CceEEEecccccccCCCCC
Q 007224 462 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 462 ~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~v~~---g~~G~l~~~~~~~~~~v~~ 537 (612)
+....+-+.+-.++..|.+.|..-..|.||+.+.|+||+|+-+|+.+.||.. |+|.+ ..+||+.
T Consensus 341 F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla------------ 408 (465)
T KOG1387|consen 341 FEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLA------------ 408 (465)
T ss_pred EEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeec------------
Confidence 7777788888889999999999999999999999999999999999987744 77765 3689974
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHHH
Q 007224 538 VDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 538 ~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
.+.++.++++.+++.. +.+.+..|.+++. ..+|+-....+.|...+.+++.
T Consensus 409 ~t~~EYaE~iLkIv~~-~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~ 461 (465)
T KOG1387|consen 409 PTDEEYAEAILKIVKL-NYDERNMMRRNARKSLARFGELKFDKDWENPICKLLE 461 (465)
T ss_pred CChHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhc
Confidence 6888999999999986 2444566666653 5789999999999998888874
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.1e-13 Score=136.04 Aligned_cols=300 Identities=17% Similarity=0.181 Sum_probs=187.6
Q ss_pred CCcEEEEecCCcc--chHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCC
Q 007224 228 GEDVVFVANDWHT--SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 305 (612)
Q Consensus 228 ~pDvvih~h~~~~--~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (612)
.+| +|..++..+ .++.+.+.... .+++.++..||..|. . .+++ ..+...|+..
T Consensus 103 ~~~-~ilvQNPP~iPtliv~~~~~~l------~~~KfiIDWHNy~Ys-l-------~l~~----------~~g~~h~lV~ 157 (444)
T KOG2941|consen 103 PPD-IILVQNPPSIPTLIVCVLYSIL------TGAKFIIDWHNYGYS-L-------QLKL----------KLGFQHPLVR 157 (444)
T ss_pred CCc-EEEEeCCCCCchHHHHHHHHHH------hcceEEEEehhhHHH-H-------HHHh----------hcCCCCchHH
Confidence 689 666665443 44555555444 799999999998772 0 0111 1122223222
Q ss_pred cchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-----ccCc----cCCCCccccccccC
Q 007224 306 RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-----DVQE----WNPLTDKYIGVKYD 376 (612)
Q Consensus 306 ~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-----d~~~----~~p~~~~~~~~~~~ 376 (612)
.....++..-+.||.-+||++.+++++... +|+. +..+++.-- ++++ |.+....+ ..|-
T Consensus 158 l~~~~E~~fgk~a~~nLcVT~AMr~dL~qn--Wgi~--------ra~v~YDrPps~~~~l~~~H~lf~~l~~d~--~~f~ 225 (444)
T KOG2941|consen 158 LVRWLEKYFGKLADYNLCVTKAMREDLIQN--WGIN--------RAKVLYDRPPSKPTPLDEQHELFMKLAGDH--SPFR 225 (444)
T ss_pred HHHHHHHHhhcccccchhhHHHHHHHHHHh--cCCc--------eeEEEecCCCCCCCchhHHHHHHhhhcccc--chhh
Confidence 223334555668999999999999998863 7764 334444211 1111 22211000 0000
Q ss_pred cchhhcchHHHHHHHHHHhC--C-CCCCCC-cEEEEEcCcccccCHHHHHHHHHhcc-----c----CCcEEEEEeCCch
Q 007224 377 ASTVMDAKPLLKEALQAEVG--L-PVDRNI-PVIGFIGRLEEQKGSDILAAAIPHFI-----K----ENVQIIVLGTGKK 443 (612)
Q Consensus 377 ~~~~~~~~~~~k~~l~~~~g--l-~~~~~~-~~il~iGrl~~~Kg~d~ll~a~~~l~-----~----~~~~lvivG~g~~ 443 (612)
.+..+.+..+..++-++.. . ...++. .+++.....++..++.+|++|+.... + |.+-++|.|+|+
T Consensus 226 -ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP- 303 (444)
T KOG2941|consen 226 -AREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP- 303 (444)
T ss_pred -hcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc-
Confidence 0112333333333333322 0 001122 35666678999999999999998442 1 578888999998
Q ss_pred hHHHHHHHHHHHCC-CceEEEe-ccChHHHHHHHHhcCEEEeC--CCC-CCCcHHHHHHHHcCCceEEcCCCCcccceec
Q 007224 444 PMEKQLEQLEILYP-EKARGVA-KFNIPLAHMIIAGADFILIP--SRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 518 (612)
Q Consensus 444 ~~~~~l~~l~~~~~-~~i~~~~-~~~~~~~~~~l~~adi~l~p--S~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 518 (612)
.++...+.+.+++ .++.... +...++.+.+++.||+.|+- |.. =-.|++++....||+||++-+...+.|+|+|
T Consensus 304 -lkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh 382 (444)
T KOG2941|consen 304 -LKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKH 382 (444)
T ss_pred -hhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhc
Confidence 4444444444444 2343333 44677888899999998764 332 2479999999999999999999999999999
Q ss_pred CceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC--HHHHHHHHHHHH-HhcCCcHHHHHH
Q 007224 519 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGM-AQDLSWKGPAKK 579 (612)
Q Consensus 519 g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~--~~~~~~~~~~~~-~~~~sw~~~a~~ 579 (612)
++||++| .|.+++++.+..+.++.. ...+.+..++.. .+..+|+..-++
T Consensus 383 ~eNGlvF------------~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~~W~~ 434 (444)
T KOG2941|consen 383 GENGLVF------------EDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQELRWDESWER 434 (444)
T ss_pred CCCceEe------------ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHHHHHH
Confidence 9999998 799999999999999542 456666666665 366777654433
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.8e-13 Score=142.32 Aligned_cols=191 Identities=15% Similarity=0.078 Sum_probs=121.6
Q ss_pred HHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHH
Q 007224 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l 391 (612)
+...+.+|+|++.++...+.+.. +|. +..++.|++-........ .+...
T Consensus 133 r~l~~~~d~v~~~~~~e~~~~~~---~g~---------~~~~vGnPv~~~~~~~~~-------------------~~~~~ 181 (385)
T TIGR00215 133 KKIEKATDFLLAILPFEKAFYQK---KNV---------PCRFVGHPLLDAIPLYKP-------------------DRKSA 181 (385)
T ss_pred HHHHHHHhHhhccCCCcHHHHHh---cCC---------CEEEECCchhhhccccCC-------------------CHHHH
Confidence 44566899999999988887764 332 455677776322111000 14456
Q ss_pred HHHhCCCCCCCCcEEEEEc--Cccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEe
Q 007224 392 QAEVGLPVDRNIPVIGFIG--RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVA 464 (612)
Q Consensus 392 ~~~~gl~~~~~~~~il~iG--rl~~-~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~ 464 (612)
++++|++. +.++|+++| |..+ .|+.+.++++++.+.+ +++++++.+.+.. ....++++...++ ..+...
T Consensus 182 r~~lgl~~--~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~- 257 (385)
T TIGR00215 182 REKLGIDH--NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLI- 257 (385)
T ss_pred HHHcCCCC--CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEE-
Confidence 77888864 446776653 7776 7999999999998865 6788877654321 3444555555442 223322
Q ss_pred ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CCCcc----------------cceecCceEEEecc
Q 007224 465 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----------------DTVEEGFTGFQMGS 527 (612)
Q Consensus 465 ~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~----------------e~v~~g~~G~l~~~ 527 (612)
.. ....+|+.||++|.+| |.+.+|+|++|+|+|... +..+. .++.+..-..-
T Consensus 258 --~~-~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pe--- 326 (385)
T TIGR00215 258 --DG-DARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPE--- 326 (385)
T ss_pred --Cc-hHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchh---
Confidence 22 2346999999999999 888889999999999883 22222 22222111110
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 528 FSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+ +-+..+++.+++.+.+++.+
T Consensus 327 l-----~q~~~~~~~l~~~~~~ll~~ 347 (385)
T TIGR00215 327 L-----LQEECTPHPLAIALLLLLEN 347 (385)
T ss_pred h-----cCCCCCHHHHHHHHHHHhcC
Confidence 0 11455789999999999987
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.5e-15 Score=132.85 Aligned_cols=130 Identities=29% Similarity=0.390 Sum_probs=94.2
Q ss_pred CcEEEEEcCcccccCHHHHHH-HHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 403 IPVIGFIGRLEEQKGSDILAA-AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~-a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
.++|+++|++.+.|+++.+++ +++++.+ ++++|+|+|.+++ +++++ .. .++.+.+.. ++..++++.||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~----~l~~~-~~--~~v~~~g~~--~e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD----ELKRL-RR--PNVRFHGFV--EELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-----HHCCH-HH--CTEEEE-S---HHHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH----HHHHh-cC--CCEEEcCCH--HHHHHHHHhCC
Confidence 368999999999999999999 9999865 7899999999775 25554 22 247777766 45778999999
Q ss_pred EEEeCCC-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 480 FILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 i~l~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+++.|+. .|+++++++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.++++|
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-----------~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-----------ANDPEELAEAIERLLND 135 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE------------TT-HHHHHHHHHHHHH-
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-----------CCCHHHHHHHHHHHhcC
Confidence 9999996 47899999999999999999998 677777666667652 67999999999999875
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.49 E-value=7e-12 Score=136.49 Aligned_cols=315 Identities=17% Similarity=0.205 Sum_probs=176.6
Q ss_pred hHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCc
Q 007224 198 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF 277 (612)
Q Consensus 198 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~ 277 (612)
+..|....+...+.+... +++|.+|..||+|..++|.+++... +++++.|.+|. .||.
T Consensus 121 w~~Y~~vN~~FA~~i~~~-----------~~~~D~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHi-----PFPs 178 (474)
T PF00982_consen 121 WEAYKRVNRRFADAIAEV-----------YRPGDLVWVHDYHLMLLPQMLRERG------PDARIGFFLHI-----PFPS 178 (474)
T ss_dssp HHHHHHHHHHHHHHHGGG-------------TT-EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S---------
T ss_pred HHHHHHHHHHHHHHHHHh-----------CcCCCEEEEeCCcHHHHHHHHHhhc------CCceEeeEEec-----CCCC
Confidence 344555555555544432 2455599999999999999999875 68999999994 3332
Q ss_pred cc-ccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccc--cCCccchhh-------hh
Q 007224 278 ED-FGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDNI-------IR 347 (612)
Q Consensus 278 ~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~~~-------~~ 347 (612)
.+ |..+ .....+-.++..||.|-+.+..+++.+.+.. ..|.+...- =+
T Consensus 179 ~e~fr~l----------------------P~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 179 SEIFRCL----------------------PWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHTTS----------------------TTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhC----------------------CcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 21 1111 1234556788899999999999988765421 222221110 01
Q ss_pred ccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHh
Q 007224 348 KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPH 427 (612)
Q Consensus 348 ~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~ 427 (612)
...+.+.|-|+|++.+...... +.-....+.++++++- +..+|+-+.|++..||+..=+.|+++
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~------------~~v~~~~~~l~~~~~~----~~~ii~gvDrld~~kGi~~kl~Afe~ 300 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARS------------PEVQERAEELREKFKG----KRKIIVGVDRLDYTKGIPEKLRAFER 300 (474)
T ss_dssp EEEEEE------HHHHHHHHH-------------S---HHHHHHHHHTTT-----SEEEEEE--B-GGG-HHHHHHHHHH
T ss_pred EEEEEEeeccCChHHHHhhccC------------hHHHHHHHHHHHhcCC----CcEEEEEeccchhhcCHHHHHHHHHH
Confidence 2357778888888766421100 0011123456777651 24799999999999999999999999
Q ss_pred ccc------CCcEEEEEeCCc----h---hHHHHHHHHHH----HCCC-c---eEEEe-ccChHHHHHHHHhcCEEEeCC
Q 007224 428 FIK------ENVQIIVLGTGK----K---PMEKQLEQLEI----LYPE-K---ARGVA-KFNIPLAHMIIAGADFILIPS 485 (612)
Q Consensus 428 l~~------~~~~lvivG~g~----~---~~~~~l~~l~~----~~~~-~---i~~~~-~~~~~~~~~~l~~adi~l~pS 485 (612)
+.+ .++.|+-++... + .+..++++++. +++. . |.... ..+.+....+|+.||+++++|
T Consensus 301 fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTs 380 (474)
T PF00982_consen 301 FLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTS 380 (474)
T ss_dssp HHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--
T ss_pred HHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecc
Confidence 865 368888777632 2 23444444433 4442 1 33333 346677778999999999999
Q ss_pred CCCCCcHHHHHHHHcCCc----eEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 486 RFEPCGLIQLHAMRYGTV----PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 486 ~~E~~gl~~lEAma~G~P----vI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
..+|.-++..|+.+|-.. +|.|...|..+.+.++ .+++ .|.|++++|++|.++++.+..++...
T Consensus 381 lrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~--al~V----------NP~d~~~~A~ai~~AL~M~~~Er~~r 448 (474)
T PF00982_consen 381 LRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEA--ALLV----------NPWDIEEVADAIHEALTMPPEERKER 448 (474)
T ss_dssp SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS---EEE-----------TT-HHHHHHHHHHHHT--HHHHHHH
T ss_pred hhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCCc--cEEE----------CCCChHHHHHHHHHHHcCCHHHHHHH
Confidence 999999999999998554 6777777777777654 3655 99999999999999999853333333
Q ss_pred HHHHH-HHhcCCcHHHHHHHHHHH
Q 007224 562 MMKNG-MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 562 ~~~~~-~~~~~sw~~~a~~~~~~y 584 (612)
+.+.. ....++-..-++.+++-+
T Consensus 449 ~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 449 HARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp HHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred HHHHHHHhHhCCHHHHHHHHHHHh
Confidence 32221 245566555555555443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-11 Score=133.24 Aligned_cols=297 Identities=14% Similarity=0.126 Sum_probs=199.7
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCccc-ccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+||.+|-.||+|..++|.+|+... .+.++.|.+|. .||..+ |..+ .
T Consensus 122 ~~~D~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHi-----PFPs~eifr~L----------------------P 168 (474)
T PRK10117 122 KDDDIIWIHDYHLLPFASELRKRG------VNNRIGFFLHI-----PFPTPEIFNAL----------------------P 168 (474)
T ss_pred CCCCEEEEeccHhhHHHHHHHHhC------CCCcEEEEEeC-----CCCChHHHhhC----------------------C
Confidence 344499999999999999999875 68899999993 333221 1111 1
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHccc--cCCccch---hh---hhccCeEEeeCCCccCccCCCCccccccccCcc
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELD---NI---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 378 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~---~~---~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~ 378 (612)
....+-.++..+|.|-+-+..+++.+.+.. ..|.+.. .+ =+...+.+.|-|||++.|......
T Consensus 169 ~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~--------- 239 (474)
T PRK10117 169 PHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG--------- 239 (474)
T ss_pred ChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc---------
Confidence 123455678899999999999888766411 1122110 00 122467888999998877432110
Q ss_pred hhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCc-------hhH
Q 007224 379 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK-------KPM 445 (612)
Q Consensus 379 ~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~------~~~~lvivG~g~-------~~~ 445 (612)
. .....+.++++++ ++.+|+-+.|++..||+..=++|++++.+ .++.|+.+.... ..+
T Consensus 240 ---~-~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l 310 (474)
T PRK10117 240 ---P-LPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDI 310 (474)
T ss_pred ---h-HHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHH
Confidence 0 1112344666654 45699999999999999999999999875 367788776643 234
Q ss_pred HHHHHHHHHH----CCC-c---eEEEe-ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCC-----ceEEcCCCC
Q 007224 446 EKQLEQLEIL----YPE-K---ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGG 511 (612)
Q Consensus 446 ~~~l~~l~~~----~~~-~---i~~~~-~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg 511 (612)
+.+++++..+ ++. . +.... .++.+++..+|+.||+++++|..+|.-++..|+.+|-. +.|.|...|
T Consensus 311 ~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAG 390 (474)
T PRK10117 311 RHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG 390 (474)
T ss_pred HHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccc
Confidence 5555555443 331 0 22111 23667777899999999999999999999999999954 367777666
Q ss_pred cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhcCCcHHHHHHHHHHHHHHH
Q 007224 512 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 512 ~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~-~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
..+.+.+ .+++ .|.|.++++++|.+++..+..++..++.... ....++-..-++.+++-+..+.
T Consensus 391 aA~~L~~---AllV----------NP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 391 AANELTS---ALIV----------NPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred hHHHhCC---CeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 6766642 5655 9999999999999999985444444433222 3456676666777776666553
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-12 Score=142.17 Aligned_cols=162 Identities=13% Similarity=0.097 Sum_probs=132.2
Q ss_pred cEEEEEc--CcccccCHHHHHHHHHhccc--CCcEEEEEeCCch-hHHHHHHHHHHHCCC--------------------
Q 007224 404 PVIGFIG--RLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-PMEKQLEQLEILYPE-------------------- 458 (612)
Q Consensus 404 ~~il~iG--rl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~-~~~~~l~~l~~~~~~-------------------- 458 (612)
..+++++ |+ +.|.++.+++++.++.. |+++|.+.|.+.. .+.+.++++..+++.
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPI 398 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhc
Confidence 4688888 99 99999999999999954 8999999999873 345555554433311
Q ss_pred ----------ceEEEecc-ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecc
Q 007224 459 ----------KARGVAKF-NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 527 (612)
Q Consensus 459 ----------~i~~~~~~-~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~ 527 (612)
....+.++ +...+...|..+.++|.+|..|+|+ .++||++.|+|+| .-|..++|.+++||+++
T Consensus 399 ~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li-- 472 (519)
T TIGR03713 399 LQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYII-- 472 (519)
T ss_pred ccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEe--
Confidence 12222333 3335668999999999999999999 9999999999999 45569999999999987
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHH
Q 007224 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETL 584 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y 584 (612)
+|..+|+++|..+|.+ ...+.++...++ .++||-+.+.++|.+++
T Consensus 473 ----------~d~~~l~~al~~~L~~--~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 473 ----------DDISELLKALDYYLDN--LKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred ----------CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 7999999999999998 778888888874 69999999999998864
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.43 E-value=1e-12 Score=123.71 Aligned_cols=176 Identities=20% Similarity=0.202 Sum_probs=93.7
Q ss_pred EEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEEE
Q 007224 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (612)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (612)
|+++... .+. .||+++++.+|+++|+++||+|+++++..+.....- ...
T Consensus 1 ili~~~~-~~~--~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~----------------------------~~~ 49 (177)
T PF13439_consen 1 ILITNIF-LPN--IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE----------------------------LVK 49 (177)
T ss_dssp -EEECC--TTS--SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST----------------------------EEE
T ss_pred CEEEEec-CCC--CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh----------------------------ccc
Confidence 4555554 453 899999999999999999999999998754332210 000
Q ss_pred EeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHH
Q 007224 167 VDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 246 (612)
Q Consensus 167 l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~ 246 (612)
.. .. ..+. ..............+.+.+++. +|| |||+|.+........
T Consensus 50 ~~-~~------------~~~~------~~~~~~~~~~~~~~~~~~i~~~------------~~D-iVh~~~~~~~~~~~~ 97 (177)
T PF13439_consen 50 IF-VK------------IPYP------IRKRFLRSFFFMRRLRRLIKKE------------KPD-IVHIHGPPAFWIALL 97 (177)
T ss_dssp E----------------TT-S------STSS--HHHHHHHHHHHHHHHH------------T-S-EEECCTTHCCCHHHH
T ss_pred ee-ee------------eecc------cccccchhHHHHHHHHHHHHHc------------CCC-eEEecccchhHHHHH
Confidence 00 00 0000 0111122223344555555554 599 889998776554433
Q ss_pred HHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCH
Q 007224 247 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 326 (612)
Q Consensus 247 l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 326 (612)
... ++|+++++|+...... ........ .......+++...+.+|.++++|+
T Consensus 98 ~~~---------~~~~v~~~H~~~~~~~-------~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ii~vS~ 148 (177)
T PF13439_consen 98 ACR---------KVPIVYTIHGPYFERR-------FLKSKLSP-------------YSYLNFRIERKLYKKADRIIAVSE 148 (177)
T ss_dssp HHH---------CSCEEEEE-HHH--HH-------TTTTSCCC-------------HHHHHHCTTHHHHCCSSEEEESSH
T ss_pred hcc---------CCCEEEEeCCCccccc-------ccccccch-------------hhhhhhhhhhhHHhcCCEEEEECH
Confidence 331 6799999997553100 00000000 000111223444678999999999
Q ss_pred HHHHHHHccccCCccchhhhhccCeEEeeCCCccCcc
Q 007224 327 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW 363 (612)
Q Consensus 327 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~ 363 (612)
..++++.+ +|++.+ ++.+|+||+|++.|
T Consensus 149 ~~~~~l~~---~~~~~~------ki~vI~ngid~~~F 176 (177)
T PF13439_consen 149 STKDELIK---FGIPPE------KIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHHHHHH---HT--SS-------EEE----B-CCCH
T ss_pred HHHHHHHH---hCCccc------CCEEEECCccHHHc
Confidence 99999996 676654 89999999999877
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-12 Score=119.76 Aligned_cols=160 Identities=23% Similarity=0.208 Sum_probs=86.3
Q ss_pred ccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEEEEeChhhhhhhhcCC
Q 007224 101 GGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGK 180 (612)
Q Consensus 101 GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~w~~ 180 (612)
||++.++.+|+++|+++||+|+++++..+...+. ...+|+.++.++.+....
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~------ 52 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRPW------ 52 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SSS------
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccch------
Confidence 8999999999999999999999999875433221 123466666554221100
Q ss_pred CCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCc
Q 007224 181 TQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSA 260 (612)
Q Consensus 181 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~ 260 (612)
.. .... +...+..++... ..+|| +||+|++..+++..+++.. .++
T Consensus 53 ----~~---------~~~~----~~~~~~~~l~~~----------~~~~D-vv~~~~~~~~~~~~~~~~~-------~~~ 97 (160)
T PF13579_consen 53 ----PL---------RLLR----FLRRLRRLLAAR----------RERPD-VVHAHSPTAGLVAALARRR-------RGI 97 (160)
T ss_dssp ----GG---------GHCC----HHHHHHHHCHHC----------T---S-EEEEEHHHHHHHHHHHHHH-------HT-
T ss_pred ----hh---------hhHH----HHHHHHHHHhhh----------ccCCe-EEEecccchhHHHHHHHHc-------cCC
Confidence 00 0011 112222333111 12799 9999997766666666633 489
Q ss_pred eEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCc
Q 007224 261 KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGV 340 (612)
Q Consensus 261 ~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~ 340 (612)
|+++++|+....... .+. ......+++..+..+|.++++|+..++.+.+ +|+
T Consensus 98 p~v~~~h~~~~~~~~------------~~~-------------~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~---~g~ 149 (160)
T PF13579_consen 98 PLVVTVHGTLFRRGS------------RWK-------------RRLYRWLERRLLRRADRVIVVSEAMRRYLRR---YGV 149 (160)
T ss_dssp -EEEE-SS-T------------------HH-------------HHHHHHHHHHHHHH-SEEEESSHHHHHHHHH---H--
T ss_pred cEEEEECCCchhhcc------------chh-------------hHHHHHHHHHHHhcCCEEEECCHHHHHHHHH---hCC
Confidence 999999964321100 000 0011244577888999999999999999996 777
Q ss_pred cchhhhhccCeEEeeCC
Q 007224 341 ELDNIIRKTGIKGIVNG 357 (612)
Q Consensus 341 ~~~~~~~~~~i~vI~Ng 357 (612)
+.+ ++.+||||
T Consensus 150 ~~~------ri~vipnG 160 (160)
T PF13579_consen 150 PPD------RIHVIPNG 160 (160)
T ss_dssp -GG------GEEE----
T ss_pred CCC------cEEEeCcC
Confidence 766 99999998
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.3e-11 Score=133.06 Aligned_cols=415 Identities=19% Similarity=0.203 Sum_probs=256.9
Q ss_pred CccccccHHHHhhhhHHHHHhCCCeEEEEeecCCc-c-------------cccCCcc------------EE--EEEEeCC
Q 007224 96 PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-Y-------------KDAWDTD------------VV--IELKVGD 147 (612)
Q Consensus 96 P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~-~-------------~~~~~~~------------~~--~~~~~~~ 147 (612)
|-. .||+|+........++..|...+.+.-+|.+ + ++.|... .. ..+...+
T Consensus 111 p~l-gGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~ 189 (750)
T COG0058 111 PGL-GGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYD 189 (750)
T ss_pred ccc-cccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEecc
Confidence 543 4999999999999999999999988876552 1 1223210 11 2233333
Q ss_pred -eeeEEEEEEeeecCceEEEEeChhhhhhhhc-CCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhc-cCCCCCCC
Q 007224 148 -KIEKVRFFHCHKRGVDRVFVDHPWFLAKVVW-GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILN-LNSNKYFS 224 (612)
Q Consensus 148 -~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~w-~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~ 224 (612)
....++.+......+++++.+...--.+ .| .+-...+|++.+ -...+.+-.+++.+.++.+..+. ...
T Consensus 190 ~~~~~lrlW~a~~~~~~~~l~~~n~~e~~-~~~~~iT~~LYp~Ds---~elRl~Qeyfl~~agvq~I~~~~~~~~----- 260 (750)
T COG0058 190 NRVVTLRLWQAQVGRVPLYLLDFNVGENK-NDARNITRVLYPGDS---KELRLKQEYFLGSAGVQDILARGHLEH----- 260 (750)
T ss_pred CcEEEEEEEEEecCccceEeecCCCcccc-hhhhhHHhhcCCCCc---HHHHHhhhheeeeHHHHHHHHHhhhcc-----
Confidence 4556777776666667777763221111 11 112245777532 12223334567777777766652 110
Q ss_pred CCCCCcEEEEecCCccchHHHHHHH-hhcCCCC-------CCCceEEEEEecCcccc--cCCcccccccC-----CCccc
Q 007224 225 GPYGEDVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLN-----LPAQF 289 (612)
Q Consensus 225 ~~~~pDvvih~h~~~~~~~~~~l~~-~~~~~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~~-----l~~~~ 289 (612)
+.+.+- +.|.||-|.+++..-+-+ ..-..|+ ....-.+||.|.+...+ .|+...+..+. .....
T Consensus 261 ~~~~~~-~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~i 339 (750)
T COG0058 261 HDLDVL-ADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEI 339 (750)
T ss_pred ccccch-hhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHH
Confidence 012344 778999998876655444 2211111 12346799999876544 45544432111 11100
Q ss_pred cccc----ccccCC-----CCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccc---cCCccchhhhhccCeEEeeCC
Q 007224 290 KSSF----DFIDGY-----NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIVNG 357 (612)
Q Consensus 290 ~~~~----~~~~~~-----~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI~Ng 357 (612)
...| ...... ..+... .++--.++..|..+..||+-+.+.+.+.. .+++. +.++.-+.||
T Consensus 340 n~~~l~~~~~~~~~~~~~~~~~i~~--v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~------p~~i~nvTNG 411 (750)
T COG0058 340 NARFLPEVRLLYLGDLIRRGSPIEE--VNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLY------PEKINNVTNG 411 (750)
T ss_pred HhhhhHHHHhhccccccccCCcccc--eehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccC------ccccccccCC
Confidence 0000 000000 000000 34444567788889999988777665421 12222 3488999999
Q ss_pred CccCccCCCCccccccccCcc--------------------------hhhcchHHHHHH----HHHHhCCCCCCCCcEEE
Q 007224 358 MDVQEWNPLTDKYIGVKYDAS--------------------------TVMDAKPLLKEA----LQAEVGLPVDRNIPVIG 407 (612)
Q Consensus 358 vd~~~~~p~~~~~~~~~~~~~--------------------------~~~~~~~~~k~~----l~~~~gl~~~~~~~~il 407 (612)
|....|--...+.+..-|+.. .+...|..+|+. +..+.|+..+++...++
T Consensus 412 It~rrWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~ 491 (750)
T COG0058 412 ITPRRWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDG 491 (750)
T ss_pred cCCchhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceee
Confidence 999888544444444444444 223344444433 44566888889999999
Q ss_pred EEcCcccccCHHHHHHHHHhc----cc---CCcEEEEEeCCch------hHHHHHHHHHHHCC--CceEEEeccChHHHH
Q 007224 408 FIGRLEEQKGSDILAAAIPHF----IK---ENVQIIVLGTGKK------PMEKQLEQLEILYP--EKARGVAKFNIPLAH 472 (612)
Q Consensus 408 ~iGrl~~~Kg~d~ll~a~~~l----~~---~~~~lvivG~g~~------~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~ 472 (612)
++-|+.++|+..+.+.-+..+ ++ +.+++++.|+..+ .+.+.+...+...+ .+|.++..++...+.
T Consensus 492 ~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvslA~ 571 (750)
T COG0058 492 QARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVSLAE 571 (750)
T ss_pred eehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChhHHH
Confidence 999999999988876555444 32 5688888898653 23344444444432 468888899999999
Q ss_pred HHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCccccee--cCceEEEecccc
Q 007224 473 MIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFS 529 (612)
Q Consensus 473 ~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~l~~~~~ 529 (612)
.++.+||+-...|+. |++|++-+-+|..|.+.|+|-.|..+|+.+ .+.|||+||...
T Consensus 572 ~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~ 632 (750)
T COG0058 572 LLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETV 632 (750)
T ss_pred hhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCch
Confidence 999999999999875 999999999999999999999999999997 789999998654
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.4e-10 Score=129.59 Aligned_cols=296 Identities=15% Similarity=0.175 Sum_probs=193.7
Q ss_pred cEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccc-cccCCCcccccccccccCCCCCcCCcch
Q 007224 230 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKI 308 (612)
Q Consensus 230 Dvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (612)
| +|..||+|..++|.+|+... .++++.|.+|. .||...+ ..+ ...
T Consensus 203 d-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHi-----PFPs~eifr~L----------------------P~r 248 (854)
T PLN02205 203 D-FVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHS-----PFPSSEIYKTL----------------------PIR 248 (854)
T ss_pred C-EEEEeCchhhHHHHHHHhhC------CCCcEEEEecC-----CCCChHHHhhC----------------------CcH
Confidence 6 99999999999999998875 78999999993 3443211 111 122
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccc--cCCccchh-----hh----hccCeEEeeCCCccCccCCCCccccccccCc
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDN-----II----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 377 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~~-----~~----~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~ 377 (612)
.-+-.++..||.|-+.+..+++.+.+.. ..|.+.+. .+ +..++.+.|-|||...|......
T Consensus 249 ~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~-------- 320 (854)
T PLN02205 249 EELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL-------- 320 (854)
T ss_pred HHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC--------
Confidence 3445678899999999999988766511 12222111 00 23467788999998877432110
Q ss_pred chhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCc-------hh
Q 007224 378 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KP 444 (612)
Q Consensus 378 ~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~----~~~lvivG~g~-------~~ 444 (612)
.......++++++++- +++.+|+-+.|++..||+..=+.|++++.+ | ++.|+.+.... ..
T Consensus 321 ----~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~ 393 (854)
T PLN02205 321 ----PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKE 393 (854)
T ss_pred ----hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHH
Confidence 0011123456666542 245799999999999999999999999865 3 66788776532 23
Q ss_pred HHHHHHHHHH----HCCC----ceEEEe-ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCC-------------
Q 007224 445 MEKQLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT------------- 502 (612)
Q Consensus 445 ~~~~l~~l~~----~~~~----~i~~~~-~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~------------- 502 (612)
++.+++++.. +++. -|.... .++.++.-.+|+.||+++++|..+|.-++..|+.+|..
T Consensus 394 ~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~ 473 (854)
T PLN02205 394 VQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEP 473 (854)
T ss_pred HHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCcccccccccccc
Confidence 4444444443 4432 133332 24667777899999999999999999999999998743
Q ss_pred ------ceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhcCCcHH
Q 007224 503 ------VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKG 575 (612)
Q Consensus 503 ------PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~-~~~~~sw~~ 575 (612)
+.|.|..-|....+. + .++ |.|.|+++++++|.+++..+..++..++.+.. ....++-..
T Consensus 474 ~~~~~gvLiLSEfaGaa~~L~-~--Ai~----------VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~ 540 (854)
T PLN02205 474 STPKKSMLVVSEFIGCSPSLS-G--AIR----------VNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGY 540 (854)
T ss_pred ccCCCCceEeeeccchhHHhC-c--CeE----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 245555444444443 2 454 49999999999999999985444443333222 235566666
Q ss_pred HHHHHHHHHHHH
Q 007224 576 PAKKWEETLLNL 587 (612)
Q Consensus 576 ~a~~~~~~y~~l 587 (612)
-++.++.-+++.
T Consensus 541 W~~~fl~~l~~~ 552 (854)
T PLN02205 541 WARSFLQDLERT 552 (854)
T ss_pred HHHHHHHHHHHH
Confidence 666666655554
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.6e-09 Score=116.40 Aligned_cols=316 Identities=17% Similarity=0.190 Sum_probs=201.4
Q ss_pred hhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCC
Q 007224 197 NQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA 276 (612)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~ 276 (612)
.+..|....++..+.+... |+++.+|..||+|..++|.+++... .+.++.|.+|. .||
T Consensus 126 ~w~~Y~~vN~~FAd~i~~~-----------~~~gDiIWVhDYhL~L~P~mlR~~~------~~~~IgfFlHi-----PfP 183 (486)
T COG0380 126 WWDAYVKVNRKFADKIVEI-----------YEPGDIIWVHDYHLLLVPQMLRERI------PDAKIGFFLHI-----PFP 183 (486)
T ss_pred HHHHHHHHHHHHHHHHHHh-----------cCCCCEEEEEechhhhhHHHHHHhC------CCceEEEEEeC-----CCC
Confidence 3455666666655554443 2333399999999999999999876 78899999993 333
Q ss_pred cccc-cccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHcccc--CC------ccchhh-h
Q 007224 277 FEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED--KG------VELDNI-I 346 (612)
Q Consensus 277 ~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g------~~~~~~-~ 346 (612)
...+ ..+ ....-+-.++..+|.|-+.++.+++.+.+... .+ +..... -
T Consensus 184 ssEvfr~l----------------------P~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~ 241 (486)
T COG0380 184 SSEVFRCL----------------------PWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADG 241 (486)
T ss_pred CHHHHhhC----------------------chHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCC
Confidence 3211 111 01223345778999999999999887654211 11 110000 0
Q ss_pred hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHH
Q 007224 347 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIP 426 (612)
Q Consensus 347 ~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~ 426 (612)
+..++..+|-|+|+..|.-.... ..-.....+++++++- ++.+|+.+.|++.-||+..=+.|++
T Consensus 242 ~~v~v~a~PIgID~~~~~~~~~~------------~~v~~~~~el~~~~~~----~~kiivgvDRlDy~kGi~~rl~Afe 305 (486)
T COG0380 242 RIVKVGAFPIGIDPEEFERALKS------------PSVQEKVLELKAELGR----NKKLIVGVDRLDYSKGIPQRLLAFE 305 (486)
T ss_pred ceEEEEEEeeecCHHHHHHhhcC------------CchhhHHHHHHHHhcC----CceEEEEehhcccccCcHHHHHHHH
Confidence 11367788999999887543210 0000123455555542 3679999999999999999999999
Q ss_pred hccc------CCcEEEEEeCCc----h---hHHHHHHHHHH----HCCC----ceEEEe-ccChHHHHHHHHhcCEEEeC
Q 007224 427 HFIK------ENVQIIVLGTGK----K---PMEKQLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIP 484 (612)
Q Consensus 427 ~l~~------~~~~lvivG~g~----~---~~~~~l~~l~~----~~~~----~i~~~~-~~~~~~~~~~l~~adi~l~p 484 (612)
+|.. .++.++.++... + .+..+++++.. +++. -+.++- ..+.+++.+++..||+++++
T Consensus 306 ~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVt 385 (486)
T COG0380 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVT 385 (486)
T ss_pred HHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeec
Confidence 9975 367888888754 2 24444444444 4442 122221 24667777899999999999
Q ss_pred CCCCCCcHHHHHHHHc----CCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 485 SRFEPCGLIQLHAMRY----GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 485 S~~E~~gl~~lEAma~----G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
|..+|.-++..|+.+| +-|.|-|...|....+.+ .+++ .|.|.++++++|.++|..+.+++.+
T Consensus 386 plrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliV----------NP~d~~~va~ai~~AL~m~~eEr~~ 452 (486)
T COG0380 386 PLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIV----------NPWDTKEVADAIKRALTMSLEERKE 452 (486)
T ss_pred cccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeE----------CCCChHHHHHHHHHHhcCCHHHHHH
Confidence 9999999999999987 335666665555555554 4655 9999999999999999985333322
Q ss_pred HHHHHH-HHhcCCcHHHHHHHHHHHH
Q 007224 561 EMMKNG-MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 561 ~~~~~~-~~~~~sw~~~a~~~~~~y~ 585 (612)
++..-. ....++-...+..+++-+.
T Consensus 453 r~~~~~~~v~~~d~~~W~~~fl~~la 478 (486)
T COG0380 453 RHEKLLKQVLTHDVARWANSFLDDLA 478 (486)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 222211 1344555555555444443
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.21 E-value=2e-08 Score=106.47 Aligned_cols=167 Identities=16% Similarity=0.169 Sum_probs=95.8
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCH-HHHHHHHHhcccCCcEEEE-EeCCchhHHHHHHHHHHHCCCceEEEecc
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGS-DILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKF 466 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~-d~ll~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~i~~~~~~ 466 (612)
+..++.++++. ++++|+.+|.=.--+.+ +.+.+++..+. .++++++ +|... +++.+.. +.. +. ...|
T Consensus 173 ~~~~~~~~l~~--~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~--~~~~~~~----~~~-~~-~~~f 241 (352)
T PRK12446 173 EKGLAFLGFSR--KKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGN--LDDSLQN----KEG-YR-QFEY 241 (352)
T ss_pred hHHHHhcCCCC--CCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCch--HHHHHhh----cCC-cE-Eecc
Confidence 34456677753 45677666543333444 34445555553 3477665 44332 4443332 121 22 2244
Q ss_pred ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC-----C----cccceecCceEEEecccccccCCCCC
Q 007224 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-----G----LVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-----g----~~e~v~~g~~G~l~~~~~~~~~~v~~ 537 (612)
..+.++.+|+.||++|. -+-++++.|++++|+|.|.-... + ..+.+.+...+..+ .-+.
T Consensus 242 ~~~~m~~~~~~adlvIs----r~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l--------~~~~ 309 (352)
T PRK12446 242 VHGELPDILAITDFVIS----RAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVL--------YEED 309 (352)
T ss_pred hhhhHHHHHHhCCEEEE----CCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEc--------chhc
Confidence 43556679999999984 24678999999999999988532 1 11233344445544 1133
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 538 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 538 ~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
-+++.+.+++.+++.+ ++.+.+. .+.+.....+++..+++.
T Consensus 310 ~~~~~l~~~l~~ll~~--~~~~~~~-----~~~~~~~~aa~~i~~~i~ 350 (352)
T PRK12446 310 VTVNSLIKHVEELSHN--NEKYKTA-----LKKYNGKEAIQTIIDHIS 350 (352)
T ss_pred CCHHHHHHHHHHHHcC--HHHHHHH-----HHHcCCCCHHHHHHHHHH
Confidence 4689999999999877 4444322 234555566666655543
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=2e-09 Score=121.41 Aligned_cols=295 Identities=17% Similarity=0.196 Sum_probs=187.9
Q ss_pred CcEEEEecCCccchHHHHHHHhhc-CCCC-------CCCceEEEEEecCcccc--cCCcccccccC-----CCc----cc
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYK-PKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLN-----LPA----QF 289 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~-~~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~~-----l~~----~~ 289 (612)
..++||.||-|++++...+-+.+- ..|+ .....++||-|.+...+ .|+...+..+- +.. .+
T Consensus 313 ~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~f 392 (815)
T PRK14986 313 DKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF 392 (815)
T ss_pred cccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHH
Confidence 355999999998876655544321 1111 13457899999876544 45554443221 111 11
Q ss_pred cccc--cccc-----CCC---CCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCc
Q 007224 290 KSSF--DFID-----GYN---KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 359 (612)
Q Consensus 290 ~~~~--~~~~-----~~~---~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd 359 (612)
...+ .+.. +-. ..-.+...++-..++..+..+..||+-..+.+.+...... .. +-+.++.-|.|||.
T Consensus 393 l~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df--~~-l~P~kf~niTNGV~ 469 (815)
T PRK14986 393 LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADF--AK-IFPGRFCNVTNGVT 469 (815)
T ss_pred HHHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHH--Hh-hCCCcccccCCCCC
Confidence 1100 0000 000 0000123455566778888899999877766532110000 00 11236777999999
Q ss_pred cCccC----CCCcccccc------------------ccCc----chhhcchHHHHHH----HHHHhCCCCCCCCcEEEEE
Q 007224 360 VQEWN----PLTDKYIGV------------------KYDA----STVMDAKPLLKEA----LQAEVGLPVDRNIPVIGFI 409 (612)
Q Consensus 360 ~~~~~----p~~~~~~~~------------------~~~~----~~~~~~~~~~k~~----l~~~~gl~~~~~~~~il~i 409 (612)
...|- |.-.+-+.. -.+. ..+.+.+..+|.. ++++.|...+++...++++
T Consensus 470 ~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qa 549 (815)
T PRK14986 470 PRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQI 549 (815)
T ss_pred hhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeee
Confidence 88875 321111110 0011 1244455555554 4567799999999999999
Q ss_pred cCcccccCHHH-HHHHHHhc---cc-C-----CcEEEEEeCCch------hHHHHHHHHHH------HCCC--ceEEEec
Q 007224 410 GRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEI------LYPE--KARGVAK 465 (612)
Q Consensus 410 Grl~~~Kg~d~-ll~a~~~l---~~-~-----~~~lvivG~g~~------~~~~~l~~l~~------~~~~--~i~~~~~ 465 (612)
-|+.++|+..+ ++..+..+ ++ + +.++++.|+..+ .+-+.+-+++. ...+ ++.+...
T Consensus 550 kR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlen 629 (815)
T PRK14986 550 KRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPN 629 (815)
T ss_pred hhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCC
Confidence 99999999999 66665544 33 2 588999998543 23344444444 2233 6888888
Q ss_pred cChHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEec
Q 007224 466 FNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 526 (612)
++..++..++.+||+....|+. |++|++-+-+|..|.+.+++-.|...|+.++ +.|||+||
T Consensus 630 Y~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 630 YSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred CCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 9999999999999999999974 9999999999999999999999999999987 88999996
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.2e-07 Score=99.81 Aligned_cols=342 Identities=17% Similarity=0.147 Sum_probs=186.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCe-EEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR-VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~-V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
|+|++.... +||--.....|+++|.++|++ |.++... ...+ ..... ..++.
T Consensus 1 ~~ivl~~gG------TGGHv~pAlAl~~~l~~~g~~~v~~~~~~--~~~e-------------------~~l~~-~~~~~ 52 (357)
T COG0707 1 KKIVLTAGG------TGGHVFPALALAEELAKRGWEQVIVLGTG--DGLE-------------------AFLVK-QYGIE 52 (357)
T ss_pred CeEEEEeCC------CccchhHHHHHHHHHHhhCccEEEEeccc--ccce-------------------eeecc-ccCce
Confidence 456666543 666666777899999999996 4444222 1111 11111 12667
Q ss_pred EEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchH
Q 007224 164 RVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~ 243 (612)
++.++...+..+ . +..++.....+++...++.+.+. +++||+|+-.+.+.+. .
T Consensus 53 ~~~I~~~~~~~~---------~--------~~~~~~~~~~~~~~~~~a~~il~---------~~kPd~vig~Ggyvs~-P 105 (357)
T COG0707 53 FELIPSGGLRRK---------G--------SLKLLKAPFKLLKGVLQARKILK---------KLKPDVVIGTGGYVSG-P 105 (357)
T ss_pred EEEEeccccccc---------C--------cHHHHHHHHHHHHHHHHHHHHHH---------HcCCCEEEecCCcccc-H
Confidence 777764433222 0 11133333445555555544443 3489955555544443 3
Q ss_pred HHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEe
Q 007224 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 323 (612)
+.++... .++|++++.-|... | ..+ +...+.++.|.+
T Consensus 106 ~~~Aa~~-------~~iPv~ihEqn~~~-G--------------------------------~an---k~~~~~a~~V~~ 142 (357)
T COG0707 106 VGIAAKL-------LGIPVIIHEQNAVP-G--------------------------------LAN---KILSKFAKKVAS 142 (357)
T ss_pred HHHHHHh-------CCCCEEEEecCCCc-c--------------------------------hhH---HHhHHhhceeee
Confidence 4444433 47887776654332 1 112 223556777766
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~ 403 (612)
.-+. .. -+.+ +.++.+.-|.+..+... .+ ....+..... ++
T Consensus 143 ~f~~----~~----~~~~------~~~~~~tG~Pvr~~~~~-~~--------------------~~~~~~~~~~----~~ 183 (357)
T COG0707 143 AFPK----LE----AGVK------PENVVVTGIPVRPEFEE-LP--------------------AAEVRKDGRL----DK 183 (357)
T ss_pred cccc----cc----ccCC------CCceEEecCcccHHhhc-cc--------------------hhhhhhhccC----CC
Confidence 5554 11 1111 22567777777766554 21 1111211111 45
Q ss_pred cEEEEEcC-cccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 404 PVIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~il~iGr-l~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
++|+.+|. ..-.+=-+.+.++...+.+ +++++....... ++ .+++.-.+++. .....|..+ +..+|+.||++|
T Consensus 184 ~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~-~~-~~~~~~~~~~~--~~v~~f~~d-m~~~~~~ADLvI 257 (357)
T COG0707 184 KTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND-LE-ELKSAYNELGV--VRVLPFIDD-MAALLAAADLVI 257 (357)
T ss_pred cEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch-HH-HHHHHHhhcCc--EEEeeHHhh-HHHHHHhccEEE
Confidence 67777664 4444433334444444432 677665543332 33 33333333332 344455555 456999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCCc--------ccceecCceEEEecccccccCCCCCCC--HHHHHHHHHHHHH
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALA 552 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~l~~ll~ 552 (612)
. + +-++++.|..++|+|.|--..+.. ...+.+...|.++ +..+ ++.+.+.|.+++.
T Consensus 258 s--R--aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i----------~~~~lt~~~l~~~i~~l~~ 323 (357)
T COG0707 258 S--R--AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVI----------RQSELTPEKLAELILRLLS 323 (357)
T ss_pred e--C--CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEe----------ccccCCHHHHHHHHHHHhc
Confidence 3 3 457999999999999998875433 2233344556665 4444 8999999999999
Q ss_pred hhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l 587 (612)
+ ++.+.+|..++. .+.-...++++.++...+
T Consensus 324 ~--~~~l~~m~~~a~--~~~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 324 N--PEKLKAMAENAK--KLGKPDAAERIADLLLAL 354 (357)
T ss_pred C--HHHHHHHHHHHH--hcCCCCHHHHHHHHHHHH
Confidence 8 778888877653 344444455555554443
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.1e-10 Score=97.03 Aligned_cols=89 Identities=22% Similarity=0.303 Sum_probs=78.8
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~ 559 (612)
+.+.|++.+++++.++|+|+||+|+|+++.+++.+++.++.+++.+ + |++++.+++..++++ ++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~----------~--~~~el~~~i~~ll~~--~~~~ 66 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITY----------N--DPEELAEKIEYLLEN--PEER 66 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEE----------C--CHHHHHHHHHHHHCC--HHHH
Confidence 4678998999999999999999999999999999999999999987 3 999999999999998 6666
Q ss_pred HHHHHHH---HHhcCCcHHHHHHHHH
Q 007224 560 AEMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 560 ~~~~~~~---~~~~~sw~~~a~~~~~ 582 (612)
+++++++ +.++|+|+..++++++
T Consensus 67 ~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 67 RRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 6666665 6789999999998864
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.3e-08 Score=113.13 Aligned_cols=290 Identities=20% Similarity=0.226 Sum_probs=189.8
Q ss_pred CCcEEEEecCCccchHHHHHHHhhc-CCCC-------CCCceEEEEEecCcccc--cCCcccccccCCCccc--------
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYK-PKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQF-------- 289 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~-~~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~~l~~~~-------- 289 (612)
++. +||.||-|++++..-+-+.+- ..|+ .....++||.|.+...+ .|+.+.+..+ +|+.+
T Consensus 300 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~-lpr~~~II~~In~ 377 (797)
T cd04300 300 DKV-AIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERL-LPRHLEIIYEINR 377 (797)
T ss_pred Cce-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHH-ChHHHHHHHHHHH
Confidence 456 999999998876555443321 1111 13457899999875544 4554443322 11111
Q ss_pred --c--------------cccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEE
Q 007224 290 --K--------------SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG 353 (612)
Q Consensus 290 --~--------------~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~v 353 (612)
. ..+..++.. .....++-..++..+..|..||+-..+.+++...... .. +-+.++.-
T Consensus 378 ~~~~~~~~~~~~~~~~~~~l~ii~~~----~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df--~~-l~P~kf~n 450 (797)
T cd04300 378 RFLEEVRAKYPGDEDRIRRMSIIEEG----GEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDF--YE-LYPEKFNN 450 (797)
T ss_pred HHHHHHHHhcCCCHHHHHhhcccccC----CCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHH--Hh-hCCCccCC
Confidence 0 000000100 0123566666788999999999988877665200000 00 11237788
Q ss_pred eeCCCccCccC----CCCcccccc-----------------cc--Cc---chhhcchHHHHHH----HHHHhCCCCCCCC
Q 007224 354 IVNGMDVQEWN----PLTDKYIGV-----------------KY--DA---STVMDAKPLLKEA----LQAEVGLPVDRNI 403 (612)
Q Consensus 354 I~Ngvd~~~~~----p~~~~~~~~-----------------~~--~~---~~~~~~~~~~k~~----l~~~~gl~~~~~~ 403 (612)
+.|||....|- |.-...+.. +| |+ ..+.+.|..+|+. +++..|+..+++.
T Consensus 451 ~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~s 530 (797)
T cd04300 451 KTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDS 530 (797)
T ss_pred cCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCc
Confidence 99999998875 211111110 01 11 2344555566655 4667899999999
Q ss_pred cEEEEEcCcccccCHHH-HHHHHHhc---cc-C-----CcEEEEEeCCch------hHHHHHHHHHHH------CCC--c
Q 007224 404 PVIGFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEIL------YPE--K 459 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~-ll~a~~~l---~~-~-----~~~lvivG~g~~------~~~~~l~~l~~~------~~~--~ 459 (612)
..++++-|+.++|+..+ ++..+.++ +. + +.++++.|+..+ ..-+.+-.++.. ..+ +
T Consensus 531 lfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lk 610 (797)
T cd04300 531 LFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLK 610 (797)
T ss_pred cEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceE
Confidence 99999999999999999 66665444 33 2 478899998543 233344444442 223 6
Q ss_pred eEEEeccChHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEec
Q 007224 460 ARGVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 460 i~~~~~~~~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 526 (612)
+.+...++..++..++.+||+....|+. |++|+.-+-+|..|.+.|+|-.|...|+.++ ++|+|+||
T Consensus 611 VVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 611 VVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred EEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeC
Confidence 8888889999999999999999999874 9999999999999999999999999999987 78999996
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-08 Score=115.07 Aligned_cols=294 Identities=15% Similarity=0.173 Sum_probs=184.7
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcC-CCC-------CCCceEEEEEecCcccc--cCCcccccccCCCccc------cc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKP-KGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQF------KS 291 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~-~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~~l~~~~------~~ 291 (612)
.+. +||.||-|++++..-+-+.+-. .|+ .....++||.|.+...+ .|+...+..+- |+.+ ..
T Consensus 302 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~L-pr~~~ii~~in~ 379 (798)
T PRK14985 302 DYE-VIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLL-PRHMQIIKEINT 379 (798)
T ss_pred CCc-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHh-HHHHHHHHHHHH
Confidence 456 9999999988766554443221 111 13457899999876544 45544433221 1110 00
Q ss_pred ccc--cccCCCC---------CcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCcc
Q 007224 292 SFD--FIDGYNK---------PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV 360 (612)
Q Consensus 292 ~~~--~~~~~~~---------~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~ 360 (612)
.|- ....+.. .......++-..++..+..|-.||+-..+.+......+.. . +-+.++.-+.|||..
T Consensus 380 ~fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~--~-l~p~kf~nvTNGVt~ 456 (798)
T PRK14985 380 RFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYH--Q-LWPNKFHNVTNGITP 456 (798)
T ss_pred HHHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhH--h-hCCCccCCcCCCcCc
Confidence 000 0000000 0001134555556777888888887766654431110000 0 113367789999999
Q ss_pred CccC----CCCcc----ccc-------------cccCc-ch----hhcchHHHHHH----HHHHhCCCCCCCCcEEEEEc
Q 007224 361 QEWN----PLTDK----YIG-------------VKYDA-ST----VMDAKPLLKEA----LQAEVGLPVDRNIPVIGFIG 410 (612)
Q Consensus 361 ~~~~----p~~~~----~~~-------------~~~~~-~~----~~~~~~~~k~~----l~~~~gl~~~~~~~~il~iG 410 (612)
..|- |.-.. +|. .+|.. .. +.+.|..+|.. ++++.|...+++...++++-
T Consensus 457 rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~k 536 (798)
T PRK14985 457 RRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIK 536 (798)
T ss_pred chhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHh
Confidence 8884 32111 111 11222 22 24444555544 46777999999989999999
Q ss_pred CcccccCHHH-HHHHHHhccc----C-----CcEEEEEeCCch------hHHHHHHHHHHHC------CC--ceEEEecc
Q 007224 411 RLEEQKGSDI-LAAAIPHFIK----E-----NVQIIVLGTGKK------PMEKQLEQLEILY------PE--KARGVAKF 466 (612)
Q Consensus 411 rl~~~Kg~d~-ll~a~~~l~~----~-----~~~lvivG~g~~------~~~~~l~~l~~~~------~~--~i~~~~~~ 466 (612)
|+.++|+..+ ++..+..+.+ + +.++++.|+..+ .+-+.+-.++... .+ ++.+...+
T Consensus 537 R~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY 616 (798)
T PRK14985 537 RLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDY 616 (798)
T ss_pred hhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCC
Confidence 9999999999 7666554432 2 478999998643 2233344444322 22 68888889
Q ss_pred ChHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEec
Q 007224 467 NIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 526 (612)
+..++..++.+||+....|+. |++|+.-+-+|..|.+.|+|-.|...|+.++ +.|||+||
T Consensus 617 ~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 617 CVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred ChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeC
Confidence 999999999999999999874 9999999999999999999999999999886 78999996
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.7e-09 Score=111.09 Aligned_cols=171 Identities=8% Similarity=0.010 Sum_probs=128.7
Q ss_pred HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHh
Q 007224 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 395 (612)
...|.||+.++...+.+.++... ..++.+||-|+=.. +...
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~---------~~~~~~ip~g~i~~-~~~~----------------------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN---------EYQEQISQLGYLYP-FKKD----------------------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc---------ccCceEEEEEEEEe-eccc-----------------------------
Confidence 57789999998877777753211 11456666555311 1100
Q ss_pred CCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007224 396 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 396 gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~ 473 (612)
++...-++.++. +..+++++++.+ |+++|.| |.+.+ +...|.++ .+++ ++.....+....+.+
T Consensus 279 ----~r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y~-nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 279 ----NKYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKYD-NVKLYPNITTQKIQE 343 (438)
T ss_pred ----cCCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-HhcC-CcEEECCcChHHHHH
Confidence 112245666662 888999998865 8999999 76653 46788888 6774 466677777766778
Q ss_pred HHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
++..||+++-+|..|++++++.||+..|+|+|+.+. -|..+++.+ |.++ +.+|+++|+++|..++.
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~----------~~~~~~~m~~~i~~lL~ 410 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIF----------EHNEVDQLISKLKDLLN 410 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Ccee----------cCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999984 455677766 6776 89999999999999999
Q ss_pred h
Q 007224 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
+
T Consensus 411 d 411 (438)
T TIGR02919 411 D 411 (438)
T ss_pred C
Confidence 8
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.8e-08 Score=110.99 Aligned_cols=292 Identities=20% Similarity=0.218 Sum_probs=189.1
Q ss_pred CCcEEEEecCCccchHHHHHHHhhc-CCCC-------CCCceEEEEEecCcccc--cCCccccccc---------CCCcc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYK-PKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLL---------NLPAQ 288 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~-~~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~---------~l~~~ 288 (612)
.+. +||.||-|++++..-+-+.+- ..|+ .....++||-|.+.+.+ .|+.+.+..+ ++...
T Consensus 297 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~ 375 (794)
T TIGR02093 297 KKV-AIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRR 375 (794)
T ss_pred cce-EEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHH
Confidence 455 999999998876655443321 1111 13457899999875544 4555444321 11111
Q ss_pred cccccc--cccCC--------CCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccc---cCCccchhhhhccCeEEee
Q 007224 289 FKSSFD--FIDGY--------NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIV 355 (612)
Q Consensus 289 ~~~~~~--~~~~~--------~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI~ 355 (612)
+..... +.... ...-..+..++-..++..+..|..||+-..+.+.+.. .+.+ -+.++.-+.
T Consensus 376 fl~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l------~P~kf~n~T 449 (794)
T TIGR02093 376 FLAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYEL------YPEKFNNKT 449 (794)
T ss_pred HHHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhh------CCCccCCcC
Confidence 111000 00000 0000012456666778889999999998887766310 0111 123677899
Q ss_pred CCCccCccCCCCcc----cccc-----------------cc-Cc----chhhcchHHHHHH----HHHHhCCCCCCCCcE
Q 007224 356 NGMDVQEWNPLTDK----YIGV-----------------KY-DA----STVMDAKPLLKEA----LQAEVGLPVDRNIPV 405 (612)
Q Consensus 356 Ngvd~~~~~p~~~~----~~~~-----------------~~-~~----~~~~~~~~~~k~~----l~~~~gl~~~~~~~~ 405 (612)
|||....|--...+ -+.. +| +. ..+.+.|..+|.. ++++.|...+++...
T Consensus 450 NGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slf 529 (794)
T TIGR02093 450 NGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIF 529 (794)
T ss_pred CCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccc
Confidence 99999887521111 1111 12 11 3344555555555 456789988999999
Q ss_pred EEEEcCcccccCHHH-HHHHHHhc---cc-C-----CcEEEEEeCCch------hHHHHHHHHHHH------CCC--ceE
Q 007224 406 IGFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEIL------YPE--KAR 461 (612)
Q Consensus 406 il~iGrl~~~Kg~d~-ll~a~~~l---~~-~-----~~~lvivG~g~~------~~~~~l~~l~~~------~~~--~i~ 461 (612)
++++-|+.++|+..+ ++..+..+ ++ + +.++++.|+..+ .+-+.+-.++.. ..+ ++.
T Consensus 530 dvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVV 609 (794)
T TIGR02093 530 DVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVV 609 (794)
T ss_pred hhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEE
Confidence 999999999999999 66665544 33 2 568999998543 233334444432 223 688
Q ss_pred EEeccChHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEec
Q 007224 462 GVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 462 ~~~~~~~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 526 (612)
+...++..++..++.+||+....|+. |++|+.-+-+|..|.+.|+|-.|...|+.++ ++|+|+||
T Consensus 610 FlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 610 FVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred EeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcC
Confidence 88889999999999999999999874 9999999999999999999999999999987 88999996
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.1e-09 Score=110.55 Aligned_cols=320 Identities=18% Similarity=0.238 Sum_probs=175.6
Q ss_pred CcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCc-ccccccCCCcccccccccccCCCCCcCCcc
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF-EDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+-||-|.|+|..+..-++.+... ..+..+||.|.... ||+-. ...+..+ ..++|+-...-.+.-.-..
T Consensus 174 ~~vVahFHEW~AGVgL~l~R~rr------l~iaTifTTHATLL-GRyLCA~~~DfYN----nLd~f~vD~EAGkr~IYHr 242 (692)
T KOG3742|consen 174 TAVVAHFHEWQAGVGLILCRARR------LDIATIFTTHATLL-GRYLCAGNVDFYN----NLDSFDVDKEAGKRQIYHR 242 (692)
T ss_pred hHHHHHHHHHHhccchheehhcc------cceEEEeehhHHHH-HHHHhcccchhhh----chhhcccchhhccchhHHH
Confidence 45577899999887555554432 57888999997543 44311 0111111 0111111111111100012
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHH
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
+-+++.+...|+...|||+-.+-+-. -+++++.-.+.|||+++..|...-. .. --.+..
T Consensus 243 YC~ERaa~h~AhVFTTVSeITa~EAe----------HlLkRKPD~itPNGLNV~KFsA~HE---FQ--------NLHA~~ 301 (692)
T KOG3742|consen 243 YCLERAAAHTAHVFTTVSEITALEAE----------HLLKRKPDVITPNGLNVKKFSAVHE---FQ--------NLHAQK 301 (692)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHHHHH----------HHHhcCCCeeCCCCcceeehhHHHH---HH--------HHHHHH
Confidence 34567777788999999986544322 2333445567899999988754210 00 012333
Q ss_pred HHHHHHHh-----C-CCCC-CCCcEEEEEcCcc-cccCHHHHHHHHHhccc------CC---cEEEEEeCC-c-------
Q 007224 388 KEALQAEV-----G-LPVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK------EN---VQIIVLGTG-K------- 442 (612)
Q Consensus 388 k~~l~~~~-----g-l~~~-~~~~~il~iGrl~-~~Kg~d~ll~a~~~l~~------~~---~~lvivG~g-~------- 442 (612)
|+.+++-+ | +.-| ++..++...||.+ ..||-|+++|++.+|.. .+ +-|+|.-.. +
T Consensus 302 KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesL 381 (692)
T KOG3742|consen 302 KEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESL 381 (692)
T ss_pred HHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhh
Confidence 44444332 1 1111 1334556679998 69999999999999843 11 223333221 0
Q ss_pred --hhHHHHHHH---------------------------------------HH----H-HCC-------------------
Q 007224 443 --KPMEKQLEQ---------------------------------------LE----I-LYP------------------- 457 (612)
Q Consensus 443 --~~~~~~l~~---------------------------------------l~----~-~~~------------------- 457 (612)
....+++.. .. . .+|
T Consensus 382 kgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~i 461 (692)
T KOG3742|consen 382 KGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSI 461 (692)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHh
Confidence 000111100 00 0 000
Q ss_pred ------------CceEEEecc---ChH----HHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc----c
Q 007224 458 ------------EKARGVAKF---NIP----LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV----D 514 (612)
Q Consensus 458 ------------~~i~~~~~~---~~~----~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~----e 514 (612)
.+++++..| +.+ ...++.++|.+.|+||.+||+|.+..|.-.+|+|-|+|+..|.. |
T Consensus 462 Rr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMee 541 (692)
T KOG3742|consen 462 RRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEE 541 (692)
T ss_pred HhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHH
Confidence 112222222 011 12358899999999999999999999999999999999987754 4
Q ss_pred ceecC-ceEEEe--cccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHH----HHHhcCCcHHHHHHHHHHHHHH
Q 007224 515 TVEEG-FTGFQM--GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN----GMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 515 ~v~~g-~~G~l~--~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~----~~~~~~sw~~~a~~~~~~y~~l 587 (612)
.|.+. .-|+.+ +.|.. ...++++|++-|...... .+++++.++ .+..-.+|+.+..-|.+.=.-.
T Consensus 542 hi~d~~ayGIYIvDRRfks-----~deSv~qL~~~m~~F~~q---sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~la 613 (692)
T KOG3742|consen 542 HIEDPQAYGIYIVDRRFKS-----PDESVQQLASFMYEFCKQ---SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLA 613 (692)
T ss_pred HhcCchhceEEEEecccCC-----hhhHHHHHHHHHHHHHHH---HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHH
Confidence 44432 335544 22211 234567777777777664 233333332 2567789999998887765443
Q ss_pred H
Q 007224 588 E 588 (612)
Q Consensus 588 ~ 588 (612)
+
T Consensus 614 L 614 (692)
T KOG3742|consen 614 L 614 (692)
T ss_pred H
Confidence 3
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.1e-07 Score=101.70 Aligned_cols=293 Identities=18% Similarity=0.239 Sum_probs=164.1
Q ss_pred cEEEEecCCccchHHHHHHHhh-cCCCC-------CCCceEEEEEecCcccc--cCCcccccccCCCc----------cc
Q 007224 230 DVVFVANDWHTSLIPCYLKTMY-KPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------QF 289 (612)
Q Consensus 230 Dvvih~h~~~~~~~~~~l~~~~-~~~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~~l~~----------~~ 289 (612)
-++||.||-|++++..-+-+.+ ...|+ ....-.+||.|.+.+.+ +|+...+..+ +|+ .+
T Consensus 215 ~~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~-Lpr~~~ii~ein~~f 293 (713)
T PF00343_consen 215 KVVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERY-LPRHLEIIYEINRRF 293 (713)
T ss_dssp HEEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHH-SHHHHHHHHHHHHHH
T ss_pred ceEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHH-ChHHHHHHHHHhHHH
Confidence 3599999999887665544433 22332 12346899999876655 4554443321 111 11
Q ss_pred ccccc--ccc--------CCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCc
Q 007224 290 KSSFD--FID--------GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 359 (612)
Q Consensus 290 ~~~~~--~~~--------~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd 359 (612)
...+. +.. +....-.....++-..++..+..+-.||+-..+.+.+...... .. +-+.++.-|.|||.
T Consensus 294 ~~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f--~~-l~P~kf~nvTNGVh 370 (713)
T PF00343_consen 294 LDELRRKYPGDEDQIRRLSIIEEGNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDF--YE-LWPEKFGNVTNGVH 370 (713)
T ss_dssp HHHHHHHSTT-HHHHHHHSSEETSSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHH--HH-HSGGGEEE----B-
T ss_pred HHHHHHHhcCcchhhhhcccccccchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhh--hh-cCCceeeccccCcc
Confidence 10000 000 0000011235677777899999999999988877654211111 01 12347999999999
Q ss_pred cCccCCCCc--------ccccccc--Ccch----------------hhcchHHHH----HHHHHHhCCCCCCCCcEEEEE
Q 007224 360 VQEWNPLTD--------KYIGVKY--DAST----------------VMDAKPLLK----EALQAEVGLPVDRNIPVIGFI 409 (612)
Q Consensus 360 ~~~~~p~~~--------~~~~~~~--~~~~----------------~~~~~~~~k----~~l~~~~gl~~~~~~~~il~i 409 (612)
+..|--... +++...+ +++. +.+.|...| +.++++.|...+++...++++
T Consensus 371 ~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~ 450 (713)
T PF00343_consen 371 PRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQA 450 (713)
T ss_dssp TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEE
T ss_pred CcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhh
Confidence 988843210 1111000 1111 112222223 335667788778888899999
Q ss_pred cCcccccCHHH-HH---HHHHhccc------CCcEEEEEeCCchh------HHHHHHHHHHH------CCC--ceEEEec
Q 007224 410 GRLEEQKGSDI-LA---AAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEIL------YPE--KARGVAK 465 (612)
Q Consensus 410 Grl~~~Kg~d~-ll---~a~~~l~~------~~~~lvivG~g~~~------~~~~l~~l~~~------~~~--~i~~~~~ 465 (612)
-|+.++|+..+ ++ +-+.++++ .++++++.|+..+. +-+.+.+++.. ..+ +|.++..
T Consensus 451 rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlen 530 (713)
T PF00343_consen 451 RRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLEN 530 (713)
T ss_dssp S-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT
T ss_pred hhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecC
Confidence 99999999888 33 44444443 26889999996532 22333333321 122 5788888
Q ss_pred cChHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEec
Q 007224 466 FNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 526 (612)
++..++..++.++|+.+..|+. |++|++-+-+|..|.+.+++-.|...|+.++ ..+.|+||
T Consensus 531 YdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG 595 (713)
T PF00343_consen 531 YDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFG 595 (713)
T ss_dssp -SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES
T ss_pred CcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcC
Confidence 9999999999999999999975 9999999999999999999999999998764 46889996
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.1e-07 Score=88.32 Aligned_cols=181 Identities=18% Similarity=0.215 Sum_probs=112.1
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|++--.| ...||.++.+.+|+..|+++||+|+|.|..... +.. ....+|++++
T Consensus 3 kIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~-~~~---------------------~~~y~gv~l~ 59 (185)
T PF09314_consen 3 KIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYY-PYK---------------------EFEYNGVRLV 59 (185)
T ss_pred eEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCC-CCC---------------------CcccCCeEEE
Confidence 69999988667 479999999999999999999999999986321 110 1223678888
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCc-cchHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~-~~~~~ 244 (612)
.++.|..- ....+..-..++..++.....+ +.+.| |++.+... .+++.
T Consensus 60 ~i~~~~~g-----------------------~~~si~yd~~sl~~al~~~~~~-------~~~~~-ii~ilg~~~g~~~~ 108 (185)
T PF09314_consen 60 YIPAPKNG-----------------------SAESIIYDFLSLLHALRFIKQD-------KIKYD-IILILGYGIGPFFL 108 (185)
T ss_pred EeCCCCCC-----------------------chHHHHHHHHHHHHHHHHHhhc-------cccCC-EEEEEcCCccHHHH
Confidence 77544210 0111222223333433221100 12478 78888766 34444
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcch-hHHHHHHHhcCEEEe
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLT 323 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~ad~vi~ 323 (612)
.+++.+.+ .+.|+++.+|++++... .++.+ .++.+ .-++.+.+.||.+|+
T Consensus 109 ~~~r~~~~-----~g~~v~vN~DGlEWkR~-------KW~~~-----------------~k~~lk~~E~~avk~ad~lIa 159 (185)
T PF09314_consen 109 PFLRKLRK-----KGGKVVVNMDGLEWKRA-------KWGRP-----------------AKKYLKFSEKLAVKYADRLIA 159 (185)
T ss_pred HHHHhhhh-----cCCcEEECCCcchhhhh-------hcCHH-----------------HHHHHHHHHHHHHHhCCEEEE
Confidence 44444321 36799999998775221 00100 01111 233556789999999
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCc
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 359 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd 359 (612)
.|+..++.+.+. |+- .+..+|++|.|
T Consensus 160 Ds~~I~~y~~~~--y~~--------~~s~~IaYGad 185 (185)
T PF09314_consen 160 DSKGIQDYIKER--YGR--------KKSTFIAYGAD 185 (185)
T ss_pred cCHHHHHHHHHH--cCC--------CCcEEecCCCC
Confidence 999999999963 441 26788999986
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.1e-06 Score=87.50 Aligned_cols=214 Identities=14% Similarity=0.150 Sum_probs=127.0
Q ss_pred HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeC-CCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N-gvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
+.|+..++.++..++.+.+ .|++.. ++.++-| ++|.-.+.... .++.+.++
T Consensus 143 ~la~l~f~~t~~~~~~L~~---eg~~~~------~i~~tG~~~iD~l~~~~~~-------------------~~~~~~~~ 194 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVIQ---MGEDPD------RVFNVGSPGLDNILSLDLL-------------------SKEELEEK 194 (365)
T ss_pred HHHhhccCCCHHHHHHHHH---cCCCCC------cEEEECCcHHHHHHhhhcc-------------------CHHHHHHH
Confidence 3568888899999998876 566544 6766655 45543221110 14567778
Q ss_pred hCCCCCCCCcEEEEEcCcc--cc---cCHHHHHHHHHhcccCCcEEEEE-e-CCchhHHHHHHHHHHHCCCceEEEeccC
Q 007224 395 VGLPVDRNIPVIGFIGRLE--EQ---KGSDILAAAIPHFIKENVQIIVL-G-TGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 395 ~gl~~~~~~~~il~iGrl~--~~---Kg~d~ll~a~~~l~~~~~~lviv-G-~g~~~~~~~l~~l~~~~~~~i~~~~~~~ 467 (612)
+|++.+. ..+++.+-+-+ .. +.+..+++++.++ ..++.++.- + .+.+...+.++++..+ ..++.......
T Consensus 195 lgl~~~~-~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~-~~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~~v~l~~~l~ 271 (365)
T TIGR03568 195 LGIDLDK-PYALVTFHPVTLEKESAEEQIKELLKALDEL-NKNYIFTYPNADAGSRIINEAIEEYVNE-HPNFRLFKSLG 271 (365)
T ss_pred hCCCCCC-CEEEEEeCCCcccccCchHHHHHHHHHHHHh-ccCCEEEEeCCCCCchHHHHHHHHHhcC-CCCEEEECCCC
Confidence 8885322 23334444432 22 3344555555444 124422221 2 1223345556665322 23477777677
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
......+++.|+++|--| .|.. .||.++|+|+|+ .+.-.|.+..|.+.+++ ..|++++.+++
T Consensus 272 ~~~~l~Ll~~a~~vitdS----Sggi-~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-----------g~~~~~I~~a~ 333 (365)
T TIGR03568 272 QERYLSLLKNADAVIGNS----SSGI-IEAPSFGVPTIN--IGTRQKGRLRADSVIDV-----------DPDKEEIVKAI 333 (365)
T ss_pred hHHHHHHHHhCCEEEEcC----hhHH-HhhhhcCCCEEe--ecCCchhhhhcCeEEEe-----------CCCHHHHHHHH
Confidence 777778999999999433 2333 899999999995 45677888778788764 46899999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q 007224 548 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 583 (612)
Q Consensus 548 ~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~ 583 (612)
.++++ ...+..+ ......|.....+++..++
T Consensus 334 ~~~~~---~~~~~~~--~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 334 EKLLD---PAFKKSL--KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHhC---hHHHHHH--hhCCCCCCCChHHHHHHHh
Confidence 99543 2222222 1123457666666776654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.5e-06 Score=86.46 Aligned_cols=296 Identities=17% Similarity=0.167 Sum_probs=165.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++=... +| .-.....+...|.++||+|.+.+..+++..+-.+ .-|++.
T Consensus 1 MkIwiDi~~-p~------hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~----------------------~yg~~y 51 (335)
T PF04007_consen 1 MKIWIDITH-PA------HVHFFKNIIRELEKRGHEVLITARDKDETEELLD----------------------LYGIDY 51 (335)
T ss_pred CeEEEECCC-ch------HHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHH----------------------HcCCCe
Confidence 888887654 23 2457778999999999999999988765444211 124555
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
..+.. .+..++ .+......+..++.+... +++|| |+.++....+.
T Consensus 52 ~~iG~-----------~g~~~~------------~Kl~~~~~R~~~l~~~~~---------~~~pD-v~is~~s~~a~-- 96 (335)
T PF04007_consen 52 IVIGK-----------HGDSLY------------GKLLESIERQYKLLKLIK---------KFKPD-VAISFGSPEAA-- 96 (335)
T ss_pred EEEcC-----------CCCCHH------------HHHHHHHHHHHHHHHHHH---------hhCCC-EEEecCcHHHH--
Confidence 44421 111111 223333444444444432 34799 55554322221
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
...+ . .++|.+....+... . ...+..+..||.++++
T Consensus 97 ~va~-~-------lgiP~I~f~D~e~a-~-----------------------------------~~~~Lt~Pla~~i~~P 132 (335)
T PF04007_consen 97 RVAF-G-------LGIPSIVFNDTEHA-I-----------------------------------AQNRLTLPLADVIITP 132 (335)
T ss_pred HHHH-H-------hCCCeEEEecCchh-h-----------------------------------ccceeehhcCCeeECC
Confidence 1111 1 47888887764110 0 0001124478999988
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEe-eCCCccCcc----CCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGI-VNGMDVQEW----NPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI-~Ngvd~~~~----~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
+-.-...+.. +|.. + .+. +||++.-.| .| ...+.+++|++
T Consensus 133 ~~~~~~~~~~---~G~~-~--------~i~~y~G~~E~ayl~~F~P----------------------d~~vl~~lg~~- 177 (335)
T PF04007_consen 133 EAIPKEFLKR---FGAK-N--------QIRTYNGYKELAYLHPFKP----------------------DPEVLKELGLD- 177 (335)
T ss_pred cccCHHHHHh---cCCc-C--------CEEEECCeeeEEeecCCCC----------------------ChhHHHHcCCC-
Confidence 8765555553 5543 2 234 677765433 33 24567888965
Q ss_pred CCCCcEEEEEcCcccccC------HHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007224 400 DRNIPVIGFIGRLEEQKG------SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 400 ~~~~~~il~iGrl~~~Kg------~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~ 473 (612)
+.++|+. |.++.+. -+.+-+.++++.+..-.++++-...+. +++.++++ +.... ..-..+.
T Consensus 178 --~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~-----~~~~~~~~--~~i~~--~~vd~~~ 244 (335)
T PF04007_consen 178 --DEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQ-----RELFEKYG--VIIPP--EPVDGLD 244 (335)
T ss_pred --CCCEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcch-----hhHHhccC--ccccC--CCCCHHH
Confidence 2355553 5554332 233456666665533336666554321 22333333 11110 1112336
Q ss_pred HHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC---CcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
++..||++| -+-|....||...|+|.|.+..| ++.+.+.+ .|+++ ...|++++.+.+...
T Consensus 245 Ll~~a~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~----------~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 245 LLYYADLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLY----------HSTDPDEIVEYVRKN 307 (335)
T ss_pred HHHhcCEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeE----------ecCCHHHHHHHHHHh
Confidence 999999999 35678899999999999998654 33344433 36766 778999998877665
Q ss_pred HHh
Q 007224 551 LAT 553 (612)
Q Consensus 551 l~~ 553 (612)
...
T Consensus 308 ~~~ 310 (335)
T PF04007_consen 308 LGK 310 (335)
T ss_pred hhc
Confidence 543
|
They are found in archaea and some bacteria and have no known function. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.9e-06 Score=86.83 Aligned_cols=119 Identities=19% Similarity=0.258 Sum_probs=80.7
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
...+++++|..... .++++++++ ++.+++++|..... ....++. ...+..+...++++.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~~----------~~~~ni~-~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAAD----------PRPGNIH-VRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCccc----------ccCCCEE-EeecChHHHHHHHHhCCEE
Confidence 44689999987665 667888887 57899999776311 0133354 4456656677899999999
Q ss_pred EeCCCCCCCcHH-HHHHHHcCCceEEcCCCCcccce------ecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 482 LIPSRFEPCGLI-QLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 482 l~pS~~E~~gl~-~lEAma~G~PvI~s~~gg~~e~v------~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
|.- .|.. +.||+++|+|+|+-...+..|.. ++-+.|..+ -.+..+++.+.+.|+++
T Consensus 255 Is~-----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~--------~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 255 ISK-----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL--------SQEDLTPERLAEFLERL 317 (318)
T ss_pred EEC-----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc--------ccccCCHHHHHHHHhcC
Confidence 942 5555 99999999999999876655432 233445443 01244678888877653
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.9e-05 Score=83.75 Aligned_cols=124 Identities=19% Similarity=0.183 Sum_probs=79.2
Q ss_pred CCcEEEEEcCccc---ccCHHHHHHHHHhcccCCcEEE-EEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007224 402 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 402 ~~~~il~iGrl~~---~Kg~d~ll~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ 477 (612)
+.++++..|.... .+-...+++++..+ +.+++ .+|..... . ...+.++......+. ..++..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~--~------~~~~~~v~~~~~~p~---~~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG--A------EDLPDNVRVVDFVPH---DWLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc--c------cCCCCceEEeCCCCH---HHHhhh
Confidence 3357777888753 34555666666655 55644 45543311 1 233445654444332 247999
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll 551 (612)
||++|. -+-..++.||+++|+|+|+....+ ..+.+.+.+.|..+ +.. +.+++.+++++++
T Consensus 305 ~d~~I~----hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l----------~~~~~~~~~l~~al~~~l 370 (401)
T cd03784 305 CAAVVH----HGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL----------DPRELTAERLAAALRRLL 370 (401)
T ss_pred hheeee----cCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC----------CcccCCHHHHHHHHHHHh
Confidence 999993 334588999999999999997654 23344445566654 333 7899999999999
Q ss_pred Hh
Q 007224 552 AT 553 (612)
Q Consensus 552 ~~ 553 (612)
++
T Consensus 371 ~~ 372 (401)
T cd03784 371 DP 372 (401)
T ss_pred CH
Confidence 85
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.1e-05 Score=81.91 Aligned_cols=269 Identities=16% Similarity=0.139 Sum_probs=145.6
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+|+..-|-.+.+..++.... .++| |.++|.-...+-. ..+. .
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~-------~~ip-v~HieaGlRs~d~------~~g~---------------------~ 111 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFY-------LNIP-VAHIEAGLRSGDR------TEGM---------------------P 111 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHH-------TT-E-EEEES-----S-T------TSST---------------------T
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-------hCCC-EEEecCCCCcccc------CCCC---------------------c
Confidence 69966555566666666665554 5889 5666642100000 0011 1
Q ss_pred hhHHHHHHH-hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCC-CccCccCCCCccccccccCcchhhcchH
Q 007224 308 INWMKAGIL-ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 308 ~~~~k~~~~-~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
-...|..+. .|+.-++.++..++.+.+ .|++++ +|.++-|- +|.-...
T Consensus 112 de~~R~~i~~la~lhf~~t~~~~~~L~~---~G~~~~------rI~~vG~~~~D~l~~~--------------------- 161 (346)
T PF02350_consen 112 DEINRHAIDKLAHLHFAPTEEARERLLQ---EGEPPE------RIFVVGNPGIDALLQN--------------------- 161 (346)
T ss_dssp HHHHHHHHHHH-SEEEESSHHHHHHHHH---TT--GG------GEEE---HHHHHHHHH---------------------
T ss_pred hhhhhhhhhhhhhhhccCCHHHHHHHHh---cCCCCC------eEEEEChHHHHHHHHh---------------------
Confidence 233444444 789999999999999997 788766 78877763 3321110
Q ss_pred HHHHHHHHHh---CCCCCCCCcEEEE-EcCccc---ccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCC
Q 007224 386 LLKEALQAEV---GLPVDRNIPVIGF-IGRLEE---QKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP 457 (612)
Q Consensus 386 ~~k~~l~~~~---gl~~~~~~~~il~-iGrl~~---~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~ 457 (612)
+....+++ ++..+...++++. .=|.+. ......+.+++..+.+ +++++++.....+.....+.+...++
T Consensus 162 --~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~- 238 (346)
T PF02350_consen 162 --KEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY- 238 (346)
T ss_dssp --HHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--
T ss_pred --HHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-
Confidence 11110000 1100012344444 434332 3445677777777766 58999999987666777777766666
Q ss_pred CceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCC
Q 007224 458 EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 458 ~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~ 536 (612)
.++.............+++.|+++|- ..|.++-||..+|+|+|.-.. |--.+.+..+.+-+ + .
T Consensus 239 ~~v~~~~~l~~~~~l~ll~~a~~vvg-----dSsGI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v----------~ 302 (346)
T PF02350_consen 239 DNVRLIEPLGYEEYLSLLKNADLVVG-----DSSGIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-V----------G 302 (346)
T ss_dssp TTEEEE----HHHHHHHHHHESEEEE-----SSHHHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-E----------T
T ss_pred CCEEEECCCCHHHHHHHHhcceEEEE-----cCccHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-e----------C
Confidence 36777777777777789999999984 346445599999999999954 44556666565545 5 3
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 537 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 537 ~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
.|.+++.+++.+++.+ ...+.++.. ....|.-...+++..++++
T Consensus 303 -~~~~~I~~ai~~~l~~--~~~~~~~~~--~~npYgdG~as~rI~~~Lk 346 (346)
T PF02350_consen 303 -TDPEAIIQAIEKALSD--KDFYRKLKN--RPNPYGDGNASERIVEILK 346 (346)
T ss_dssp -SSHHHHHHHHHHHHH---HHHHHHHHC--S--TT-SS-HHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhC--hHHHHhhcc--CCCCCCCCcHHHHHHHhhC
Confidence 7999999999999986 334333321 1245666666777766653
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.1e-05 Score=80.48 Aligned_cols=193 Identities=15% Similarity=0.064 Sum_probs=121.2
Q ss_pred HHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCc-cCCCCccccccccCcchhhcchHHHHHH
Q 007224 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQE-WNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 312 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~-~~p~~~~~~~~~~~~~~~~~~~~~~k~~ 390 (612)
....+..|+++++=+...+.+.+ +|.+ .+.|-|.+-.+. +.+. ++.
T Consensus 131 ~~i~~~~D~lLailPFE~~~y~k---~g~~---------~~yVGHpl~d~i~~~~~---------------------r~~ 177 (381)
T COG0763 131 VKIAKYVDHLLAILPFEPAFYDK---FGLP---------CTYVGHPLADEIPLLPD---------------------REA 177 (381)
T ss_pred HHHHHHhhHeeeecCCCHHHHHh---cCCC---------eEEeCChhhhhcccccc---------------------HHH
Confidence 34456889999999999998886 5543 344444432221 2222 667
Q ss_pred HHHHhCCCCCCCCcEEEEEc-Cccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc
Q 007224 391 LQAEVGLPVDRNIPVIGFIG-RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 466 (612)
Q Consensus 391 l~~~~gl~~~~~~~~il~iG-rl~~-~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~ 466 (612)
+++++|++.+. ..+.+..| |-++ .+-...+++++.++.. ++.++++--... .++...++...... .......
T Consensus 178 ar~~l~~~~~~-~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~-~~~~~~~~~~~~~~--~~~~~~~ 253 (381)
T COG0763 178 AREKLGIDADE-KTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA-KYRRIIEEALKWEV--AGLSLIL 253 (381)
T ss_pred HHHHhCCCCCC-CeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH-HHHHHHHHHhhccc--cCceEEe
Confidence 99999998654 34555566 4444 5677889999999975 789998866544 23333333332221 1112223
Q ss_pred ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CCC----------------cccceecCceEEEecccc
Q 007224 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGG----------------LVDTVEEGFTGFQMGSFS 529 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg----------------~~e~v~~g~~G~l~~~~~ 529 (612)
.+...++.+..||+.+.. +|++.+|+|.+|+|.|++- +.. ++.++-+. .++.++
T Consensus 254 ~~~~~~~a~~~aD~al~a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~---~ivPEl- 324 (381)
T COG0763 254 IDGEKRKAFAAADAALAA-----SGTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGR---EIVPEL- 324 (381)
T ss_pred cCchHHHHHHHhhHHHHh-----ccHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCC---ccchHH-
Confidence 445566799999998864 5999999999999999873 332 22222221 111111
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 530 VDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 530 ~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
.-+.-.++.+++++..++.+.
T Consensus 325 ----iq~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 325 ----IQEDCTPENLARALEELLLNG 345 (381)
T ss_pred ----HhhhcCHHHHHHHHHHHhcCh
Confidence 013346889999999999884
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.5e-06 Score=76.57 Aligned_cols=138 Identities=20% Similarity=0.254 Sum_probs=81.8
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+... +.++..++.+|.++||+|+++++..+. .+. ...+|+.++
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~~~-~~~----------------------~~~~~i~~~ 48 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRNDY-EKY----------------------EIIEGIKVI 48 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCCCc-hhh----------------------hHhCCeEEE
Confidence 789998763 236789999999999999999996432 110 112455555
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCcc-chHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~-~~~~ 244 (612)
.++.+ .+ . ...+..+ ..+.+.++. .+|| |||+|...+ ++++
T Consensus 49 ~~~~~---~k------------------~---~~~~~~~-~~l~k~ik~------------~~~D-vIh~h~~~~~~~~~ 90 (139)
T PF13477_consen 49 RLPSP---RK------------------S---PLNYIKY-FRLRKIIKK------------EKPD-VIHCHTPSPYGLFA 90 (139)
T ss_pred EecCC---CC------------------c---cHHHHHH-HHHHHHhcc------------CCCC-EEEEecCChHHHHH
Confidence 55322 01 0 1111111 133333333 2799 999998765 6667
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
.+++... ...|++++.|+...-. .+ .. ......+++..++.+|.+++.
T Consensus 91 ~l~~~~~------~~~~~i~~~hg~~~~~-~~----------~~---------------~~~~~~~~~~~~k~~~~ii~~ 138 (139)
T PF13477_consen 91 MLAKKLL------KNKKVIYTVHGSDFYN-SS----------KK---------------KKLKKFIIKFAFKRADKIIVQ 138 (139)
T ss_pred HHHHHHc------CCCCEEEEecCCeeec-CC----------ch---------------HHHHHHHHHHHHHhCCEEEEc
Confidence 6666553 3489999999643200 00 00 001234567788899999987
Q ss_pred C
Q 007224 325 S 325 (612)
Q Consensus 325 S 325 (612)
|
T Consensus 139 ~ 139 (139)
T PF13477_consen 139 S 139 (139)
T ss_pred C
Confidence 6
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.3e-05 Score=79.22 Aligned_cols=96 Identities=16% Similarity=0.168 Sum_probs=69.6
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEE-EEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
.+++++|..++.+....+++++.++. .++++ +++|.+.+. .+.++++....+ ++.. .. ..+.+.++++.||++|
T Consensus 172 ~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~~-~~~l~~~~~~~~-~i~~-~~-~~~~m~~lm~~aDl~I 246 (279)
T TIGR03590 172 RVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNPN-LDELKKFAKEYP-NIIL-FI-DVENMAELMNEADLAI 246 (279)
T ss_pred eEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCcC-HHHHHHHHHhCC-CEEE-Ee-CHHHHHHHHHHCCEEE
Confidence 47888998888777788889988763 34443 367776543 456666666544 3542 23 3455667999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
. ..|.++.|++++|+|+|+-..
T Consensus 247 s-----~~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 247 G-----AAGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred E-----CCchHHHHHHHcCCCEEEEEe
Confidence 7 377999999999999998764
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.42 E-value=0.00018 Score=77.69 Aligned_cols=188 Identities=15% Similarity=0.047 Sum_probs=112.5
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
-+.|+.|++..+...+.+.+ .|+ ++.++-|.+=....... +
T Consensus 158 ~~~a~~v~~~~~~t~~~l~~---~g~---------k~~~vGnPv~d~l~~~~---------------------~------ 198 (396)
T TIGR03492 158 SRRCLAVFVRDRLTARDLRR---QGV---------RASYLGNPMMDGLEPPE---------------------R------ 198 (396)
T ss_pred chhhCEEeCCCHHHHHHHHH---CCC---------eEEEeCcCHHhcCcccc---------------------c------
Confidence 45899999999888888875 333 56666666532211110 0
Q ss_pred hCCCCCCCCcE-EEEEcCc--ccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCCCc-----------
Q 007224 395 VGLPVDRNIPV-IGFIGRL--EEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEK----------- 459 (612)
Q Consensus 395 ~gl~~~~~~~~-il~iGrl--~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~----------- 459 (612)
.+++. +.++ +++-|.- +..++...+++++.++.+ +++++++.-.+.... +.+++...+.+..
T Consensus 199 ~~l~~--~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 199 KPLLT--GRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL-EKLQAILEDLGWQLEGSSEDQTSL 275 (396)
T ss_pred cccCC--CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH-HHHHHHHHhcCceecCCccccchh
Confidence 03332 2344 4444533 335678899999999954 578877653222212 2333333322211
Q ss_pred -----eEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc---cceec-----CceEEEec
Q 007224 460 -----ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV---DTVEE-----GFTGFQMG 526 (612)
Q Consensus 460 -----i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~---e~v~~-----g~~G~l~~ 526 (612)
+... .+ ......+++.||++|.. .|.+..|++++|+|+|.....+.. .+.+. + .++.+
T Consensus 276 ~~~~~~~v~-~~-~~~~~~~l~~ADlvI~r-----SGt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g-~~~~l- 346 (396)
T TIGR03492 276 FQKGTLEVL-LG-RGAFAEILHWADLGIAM-----AGTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLG-GSVFL- 346 (396)
T ss_pred hccCceEEE-ec-hHhHHHHHHhCCEEEEC-----cCHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcC-CEEec-
Confidence 2211 22 23456799999999976 467779999999999998743321 11121 2 22222
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007224 527 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 564 (612)
Q Consensus 527 ~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~ 564 (612)
...+++.+++++.+++++ ++.+.+|.+
T Consensus 347 ---------~~~~~~~l~~~l~~ll~d--~~~~~~~~~ 373 (396)
T TIGR03492 347 ---------ASKNPEQAAQVVRQLLAD--PELLERCRR 373 (396)
T ss_pred ---------CCCCHHHHHHHHHHHHcC--HHHHHHHHH
Confidence 556789999999999987 666666653
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.0025 Score=66.72 Aligned_cols=222 Identities=17% Similarity=0.118 Sum_probs=140.5
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHHHHHHHHH-
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE- 394 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~- 394 (612)
-|+.-+++++..++.|.. -|++.+ +|.++-|-+ |.-.+.-. +..........
T Consensus 145 ~S~~hfapte~ar~nLl~---EG~~~~------~IfvtGnt~iDal~~~~~-----------------~~~~~~~~~~~~ 198 (383)
T COG0381 145 LSDLHFAPTEIARKNLLR---EGVPEK------RIFVTGNTVIDALLNTRD-----------------RVLEDSKILAKG 198 (383)
T ss_pred hhhhhcCChHHHHHHHHH---cCCCcc------ceEEeCChHHHHHHHHHh-----------------hhccchhhHHhh
Confidence 578889999999999986 677755 788888754 22111100 00001122222
Q ss_pred hCCCCCCCCcEEEEEcCcccc-cCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007224 395 VGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 395 ~gl~~~~~~~~il~iGrl~~~-Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~ 471 (612)
++.. .++.+++..=|-+.. +++..+++++.++.+ +++.++.--...+..++.. ....+...++..+-.+.-...
T Consensus 199 ~~~~--~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~-~~~L~~~~~v~li~pl~~~~f 275 (383)
T COG0381 199 LDDK--DKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELV-LKRLKNVERVKLIDPLGYLDF 275 (383)
T ss_pred hccc--cCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHH-HHHhCCCCcEEEeCCcchHHH
Confidence 2221 223445555565543 888999998888866 4666665443333222222 122122234766666666677
Q ss_pred HHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC-cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 472 ~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
+.++..|-+++ -..|..+=||-..|+||++-+..- -+|.+..| +-.++ ..|.+.+.+.+.++
T Consensus 276 ~~L~~~a~~il-----tDSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lv-----------g~~~~~i~~~~~~l 338 (383)
T COG0381 276 HNLMKNAFLIL-----TDSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILV-----------GTDEENILDAATEL 338 (383)
T ss_pred HHHHHhceEEE-----ecCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEe-----------CccHHHHHHHHHHH
Confidence 77888886666 246889999999999999997543 45555444 44443 46889999999999
Q ss_pred HHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 551 LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+++ ++.+++|+.. ...|.--...+++.+++++-.
T Consensus 339 l~~--~~~~~~m~~~--~npYgdg~as~rIv~~l~~~~ 372 (383)
T COG0381 339 LED--EEFYERMSNA--KNPYGDGNASERIVEILLNYF 372 (383)
T ss_pred hhC--hHHHHHHhcc--cCCCcCcchHHHHHHHHHHHh
Confidence 998 6677776553 466777777888888777654
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00065 Score=72.05 Aligned_cols=192 Identities=19% Similarity=0.175 Sum_probs=119.6
Q ss_pred HHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHH
Q 007224 311 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 311 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~ 390 (612)
.+..-+..|.++++=+...+.+.+ +|+ +++.+-|.+= +...+..+ ...
T Consensus 127 ~~~i~~~~D~ll~ifPFE~~~y~~---~g~---------~~~~VGHPl~-d~~~~~~~-------------------~~~ 174 (373)
T PF02684_consen 127 AKKIKKYVDHLLVIFPFEPEFYKK---HGV---------PVTYVGHPLL-DEVKPEPD-------------------RAE 174 (373)
T ss_pred HHHHHHHHhheeECCcccHHHHhc---cCC---------CeEEECCcch-hhhccCCC-------------------HHH
Confidence 344456789999999999988886 554 3555555431 11111110 334
Q ss_pred HHHHhCCCCCCCCcE-EEEEc-Cccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEec
Q 007224 391 LQAEVGLPVDRNIPV-IGFIG-RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 391 l~~~~gl~~~~~~~~-il~iG-rl~~-~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~ 465 (612)
.++.+ ++. +.++ .++.| |-.+ .+....+++++.++.+ +++++++..... ...+.+++.....+..+....
T Consensus 175 ~~~~~-l~~--~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~~- 249 (373)
T PF02684_consen 175 AREKL-LDP--DKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIVI- 249 (373)
T ss_pred HHHhc-CCC--CCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEEE-
Confidence 45555 553 3454 44455 5555 4566999999999976 789998876543 344556666555543333222
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-C----------------CcccceecCceEEEeccc
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-G----------------GLVDTVEEGFTGFQMGSF 528 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-g----------------g~~e~v~~g~~G~l~~~~ 528 (612)
......+.++.||+.+.. .|++-+|++.+|+|.|+.-. . |++.++-+.. +++++
T Consensus 250 -~~~~~~~~m~~ad~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~---v~PEl 320 (373)
T PF02684_consen 250 -IEGESYDAMAAADAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE---VVPEL 320 (373)
T ss_pred -cCCchHHHHHhCcchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC---cchhh
Confidence 123345689999999975 48999999999999998743 2 2233222210 11111
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 529 SVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 529 ~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+-+..+++.+++.+.+++.+
T Consensus 321 -----iQ~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 321 -----IQEDATPENIAAELLELLEN 340 (373)
T ss_pred -----hcccCCHHHHHHHHHHHhcC
Confidence 22466899999999999998
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00081 Score=70.86 Aligned_cols=229 Identities=17% Similarity=0.085 Sum_probs=142.7
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHH
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 386 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 386 (612)
.-.+.+..+...|.|++-|+..++.+.+ .|.. ++.+.-| +......+ .....
T Consensus 167 ~~~~~~~~~~~i~li~aQse~D~~Rf~~---LGa~--------~v~v~GN---lKfd~~~~--------------~~~~~ 218 (419)
T COG1519 167 LKFLARLLFKNIDLILAQSEEDAQRFRS---LGAK--------PVVVTGN---LKFDIEPP--------------PQLAA 218 (419)
T ss_pred HHHHHHHHHHhcceeeecCHHHHHHHHh---cCCc--------ceEEecc---eeecCCCC--------------hhhHH
Confidence 3455677788999999999999999997 6765 3444443 22111110 12233
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEE-
Q 007224 387 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV- 463 (612)
Q Consensus 387 ~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~- 463 (612)
....++..++.+ +++++..+. ...--+.+++++..+++ ++..++++=.-++ --+.++++.++.+-.+.-+
T Consensus 219 ~~~~~r~~l~~~----r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-Rf~~v~~l~~~~gl~~~~rS 291 (419)
T COG1519 219 ELAALRRQLGGH----RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE-RFKAVENLLKRKGLSVTRRS 291 (419)
T ss_pred HHHHHHHhcCCC----CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh-hHHHHHHHHHHcCCeEEeec
Confidence 455677777643 468888887 23334668999998877 6787887766553 3455566665543211111
Q ss_pred -------------eccChHHHHHHHHhcCEEEeCC-CCCCCcHHHHHHHHcCCceEEcC-CCCcccc---eecCceEEEe
Q 007224 464 -------------AKFNIPLAHMIIAGADFILIPS-RFEPCGLIQLHAMRYGTVPIVAS-TGGLVDT---VEEGFTGFQM 525 (612)
Q Consensus 464 -------------~~~~~~~~~~~l~~adi~l~pS-~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~---v~~g~~G~l~ 525 (612)
+.--+ ++..+|..||+.++-- ..+--|--++|+.++|+|||.-. +=...|+ +...+.|+.+
T Consensus 292 ~~~~~~~~tdV~l~DtmG-EL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v 370 (419)
T COG1519 292 QGDPPFSDTDVLLGDTMG-ELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQV 370 (419)
T ss_pred CCCCCCCCCcEEEEecHh-HHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEE
Confidence 11112 3446999999988864 44556778999999999999864 2333333 3334457755
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 526 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 526 ~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
.|.+.+++.+..++.+ +..+.+|++++..---..+...+++++.++
T Consensus 371 ------------~~~~~l~~~v~~l~~~--~~~r~~~~~~~~~~v~~~~gal~r~l~~l~ 416 (419)
T COG1519 371 ------------EDADLLAKAVELLLAD--EDKREAYGRAGLEFLAQNRGALARTLEALK 416 (419)
T ss_pred ------------CCHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 5688888888888887 777778877764322223334444444443
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.001 Score=73.83 Aligned_cols=153 Identities=16% Similarity=0.163 Sum_probs=97.2
Q ss_pred HHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHHHHH
Q 007224 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 312 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~ 390 (612)
+..-+..|+++|.=+...+.+.+ .|++ ++.+-|.+ |. ..+..+ +++
T Consensus 356 kki~k~vD~ll~IfPFE~~~y~~---~gv~---------v~yVGHPL~d~--i~~~~~-------------------~~~ 402 (608)
T PRK01021 356 TILEKYLDLLLLILPFEQNLFKD---SPLR---------TVYLGHPLVET--ISSFSP-------------------NLS 402 (608)
T ss_pred HHHHHHhhhheecCccCHHHHHh---cCCC---------eEEECCcHHhh--cccCCC-------------------HHH
Confidence 44456789999999998888875 5553 45555543 32 111111 456
Q ss_pred HHHHhCCCCCCCCcEEEEEc-Cccc-ccCHHHHHHHHH--hcccCCcEEEEEeCCchhHHHHHHHHHHHCCC-ceEEEec
Q 007224 391 LQAEVGLPVDRNIPVIGFIG-RLEE-QKGSDILAAAIP--HFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGVAK 465 (612)
Q Consensus 391 l~~~~gl~~~~~~~~il~iG-rl~~-~Kg~d~ll~a~~--~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~i~~~~~ 465 (612)
.++++|++.+. ..+-++.| |-.+ .+..+.+++++. .+. ++.++++... +....+.+++...+.+. .+...
T Consensus 403 ~r~~lgl~~~~-~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~-~~l~fvvp~a-~~~~~~~i~~~~~~~~~~~~~ii-- 477 (608)
T PRK01021 403 WKEQLHLPSDK-PIVAAFPGSRRGDILRNLTIQVQAFLASSLA-STHQLLVSSA-NPKYDHLILEVLQQEGCLHSHIV-- 477 (608)
T ss_pred HHHHcCCCCCC-CEEEEECCCCHHHHHHHHHHHHHHHHHHHhc-cCeEEEEecC-chhhHHHHHHHHhhcCCCCeEEe--
Confidence 68888986432 23445555 5544 567889999998 554 3688877543 32344566665543321 12211
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.+....++++.||+.+.. +|++-+|++.+|+|.|+.-
T Consensus 478 -~~~~~~~~m~aaD~aLaa-----SGTaTLEaAL~g~PmVV~Y 514 (608)
T PRK01021 478 -PSQFRYELMRECDCALAK-----CGTIVLETALNQTPTIVTC 514 (608)
T ss_pred -cCcchHHHHHhcCeeeec-----CCHHHHHHHHhCCCEEEEE
Confidence 122235799999999975 5899999999999999863
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.0051 Score=68.46 Aligned_cols=124 Identities=11% Similarity=0.017 Sum_probs=78.3
Q ss_pred cEEEEEcCccc-----ccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--H
Q 007224 404 PVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--A 476 (612)
Q Consensus 404 ~~il~iGrl~~-----~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l--~ 476 (612)
++++..|.... .+-...+++|+.++ +.++++..++.. .. ...+.++....+++.. +++ .
T Consensus 298 ~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~--~~------~~~p~Nv~i~~w~Pq~---~lL~hp 363 (507)
T PHA03392 298 VVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV--EA------INLPANVLTQKWFPQR---AVLKHK 363 (507)
T ss_pred EEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc--Cc------ccCCCceEEecCCCHH---HHhcCC
Confidence 56677787642 23456667777766 357776555431 10 2245566655554543 367 4
Q ss_pred hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 477 ~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
.++++|. -|-..++.||+.+|+|+|+-...+ ....+.+-+.|..+. -..-+.+++.++|.++++
T Consensus 364 ~v~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~--------~~~~t~~~l~~ai~~vl~ 431 (507)
T PHA03392 364 NVKAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALD--------TVTVSAAQLVLAIVDVIE 431 (507)
T ss_pred CCCEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEec--------cCCcCHHHHHHHHHHHhC
Confidence 5888883 344568999999999999986543 333444455676551 023467999999999998
Q ss_pred h
Q 007224 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
+
T Consensus 432 ~ 432 (507)
T PHA03392 432 N 432 (507)
T ss_pred C
Confidence 7
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00066 Score=68.36 Aligned_cols=182 Identities=20% Similarity=0.252 Sum_probs=110.0
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
+..|+.+++++....+.+.. +|..+.++..-..+.-+.| ...|.|. .++.++
T Consensus 124 ~Pla~~ii~P~~~~~~~~~~---~G~~p~~i~~~~giae~~~---v~~f~pd----------------------~evlke 175 (346)
T COG1817 124 LPLADVIITPEAIDEEELLD---FGADPNKISGYNGIAELAN---VYGFVPD----------------------PEVLKE 175 (346)
T ss_pred hhhhhheecccccchHHHHH---hCCCccceecccceeEEee---cccCCCC----------------------HHHHHH
Confidence 56789999999988888775 7766554332222322222 2335553 356788
Q ss_pred hCCCCCCCCcEEEE-E---cC--cccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccCh
Q 007224 395 VGLPVDRNIPVIGF-I---GR--LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 395 ~gl~~~~~~~~il~-i---Gr--l~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~ 468 (612)
+|+..+ .+.|++ . |. ...+++.+.+.++++.|.+-. ++++-... ..++.-+++.+.+ ...-..
T Consensus 176 Lgl~~~--~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr~~-----~~~eife~~~n~i--~pk~~v 244 (346)
T COG1817 176 LGLEEG--ETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPREK-----EQAEIFEGYRNII--IPKKAV 244 (346)
T ss_pred cCCCCC--CceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecCch-----hHHHHHhhhcccc--CCcccc
Confidence 999754 245544 1 11 234678888888998885533 55555432 2233333333211 111111
Q ss_pred HHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC---CcccceecCceEEEecccccccCCCCCCCHHHHHH
Q 007224 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 469 ~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~ 545 (612)
+ .-.++-.|++++ -+-|.-.-||...|+|.|++.-| ++.+...+ .|.++ ...|+.+..+
T Consensus 245 D-~l~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~lie--~G~~~----------~s~~~~~~~~ 306 (346)
T COG1817 245 D-TLSLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLIE--KGLLY----------HSTDEIAIVE 306 (346)
T ss_pred c-HHHHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHHh--cCcee----------ecCCHHHHHH
Confidence 1 113777888888 45678889999999999999844 23344433 46766 6678888888
Q ss_pred HHHHHHHh
Q 007224 546 TVRRALAT 553 (612)
Q Consensus 546 ~l~~ll~~ 553 (612)
.+.+.+.+
T Consensus 307 ~a~~~l~~ 314 (346)
T COG1817 307 YAVRNLKY 314 (346)
T ss_pred HHHHHhhc
Confidence 88888876
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0005 Score=74.47 Aligned_cols=177 Identities=16% Similarity=0.073 Sum_probs=102.3
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC---CceEEEecc
Q 007224 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 466 (612)
Q Consensus 392 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~i~~~~~~ 466 (612)
|+++|||.+ ..+++.+.++ .|=-+..++++.++.+ |+.+|++...+.. .++.+++...+.+ +++.+...-
T Consensus 276 R~~~gLp~d--~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-~~~~l~~~~~~~Gv~~~Ri~f~~~~ 350 (468)
T PF13844_consen 276 RAQYGLPED--AVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS-GEARLRRRFAAHGVDPDRIIFSPVA 350 (468)
T ss_dssp TGGGT--SS--SEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT-HHHHHHHHHHHTTS-GGGEEEEE--
T ss_pred HHHcCCCCC--ceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-HHHHHHHHHHHcCCChhhEEEcCCC
Confidence 788999854 3555555554 5666777777777766 8999988765442 3456666666655 456665544
Q ss_pred ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec------CceEEEecccccccCCCCCCCH
Q 007224 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEAVDPVDV 540 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------g~~G~l~~~~~~~~~~v~~~d~ 540 (612)
+.+.--..+..+|++|=|..+ +-+.+.+||+.+|+|||+-....+..=+.- |-.-+ -..|.
T Consensus 351 ~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El------------IA~s~ 417 (468)
T PF13844_consen 351 PREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL------------IADSE 417 (468)
T ss_dssp -HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG------------B-SSH
T ss_pred CHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh------------cCCCH
Confidence 444333577889999976432 457899999999999998864332221110 11112 24689
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHH---HH--HhcCCcHHHHHHHHHHHHHHH
Q 007224 541 AAVSTTVRRALATYGTQALAEMMKN---GM--AQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 541 ~~la~~l~~ll~~~~~~~~~~~~~~---~~--~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+++++.-.++..+ .+.++++.++ .+ ..-|+-+..++.+++.|+.+.
T Consensus 418 ~eYv~~Av~La~D--~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~mW 468 (468)
T PF13844_consen 418 EEYVEIAVRLATD--PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQMW 468 (468)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC--HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHhC
Confidence 9999999999998 4444433332 23 245889999999999998763
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0019 Score=69.83 Aligned_cols=157 Identities=17% Similarity=0.163 Sum_probs=92.6
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
++....|..... .+++-.+++.+.+-++++++...+.+ ......+.++.-...++... ++..||++|.
T Consensus 239 ~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~-------~~~~~~p~n~~v~~~~p~~~---~l~~ad~vI~ 306 (406)
T COG1819 239 IVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGAR-------DTLVNVPDNVIVADYVPQLE---LLPRADAVIH 306 (406)
T ss_pred eEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEeccccc-------cccccCCCceEEecCCCHHH---HhhhcCEEEe
Confidence 455556776554 34444444444445888888774421 11112344454444434333 8999999996
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~ 559 (612)
.. --.++.||+.+|+|+|+--.+. ..+-+++-+.|..+ -.+..+.+.++++|.+++++..-...
T Consensus 307 hG----G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l--------~~~~l~~~~l~~av~~vL~~~~~~~~ 374 (406)
T COG1819 307 HG----GAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL--------PFEELTEERLRAAVNEVLADDSYRRA 374 (406)
T ss_pred cC----CcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec--------CcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 43 3457899999999999986553 44456666788766 23478999999999999997221111
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHH
Q 007224 560 AEMMKNGMAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 560 ~~~~~~~~~~~~sw~~~a~~~~~~y 584 (612)
.+..++.+.+.-.-+.+++.+++++
T Consensus 375 ~~~~~~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 375 AERLAEEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred HHHHHHHhhhcccHHHHHHHHHHHH
Confidence 1222222334444444455444444
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0026 Score=66.67 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=71.6
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
.++++.|. -+...+++++.++ +++.+++ |.... .. ..++.++... .+..+....++..||++|.
T Consensus 190 ~iLv~~g~----~~~~~l~~~l~~~--~~~~~i~-~~~~~-~~-------~~~~~~v~~~-~~~~~~~~~~l~~ad~vI~ 253 (321)
T TIGR00661 190 YILVYIGF----EYRYKILELLGKI--ANVKFVC-YSYEV-AK-------NSYNENVEIR-RITTDNFKELIKNAELVIT 253 (321)
T ss_pred cEEEECCc----CCHHHHHHHHHhC--CCeEEEE-eCCCC-Cc-------cccCCCEEEE-ECChHHHHHHHHhCCEEEE
Confidence 35566544 2456677777766 4555544 43221 11 1233445544 4554556779999999997
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCCCccc------ceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e------~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-+= ..++.||+++|+|+|.....+..| .+.+.+.|..+ +..+. ++.+++...+++
T Consensus 254 ~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l----------~~~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 254 HGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL----------EYKEL-RLLEAILDIRNM 314 (321)
T ss_pred CCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc----------ChhhH-HHHHHHHhcccc
Confidence 542 246899999999999998766444 34455567765 66565 444444444443
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.038 Score=56.34 Aligned_cols=164 Identities=16% Similarity=0.158 Sum_probs=107.0
Q ss_pred cEEEEEcC-cccccCHHHHHHHHHhcccCCcEEEE-EeC--CchhHHHHHHHHHHHC-C-CceEEEecc-ChHHHHHHHH
Q 007224 404 PVIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIV-LGT--GKKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 476 (612)
Q Consensus 404 ~~il~iGr-l~~~Kg~d~ll~a~~~l~~~~~~lvi-vG~--g~~~~~~~l~~l~~~~-~-~~i~~~~~~-~~~~~~~~l~ 476 (612)
++.+.+|. -++.-++..+++++.+....++++++ +|- |++.|.+++++.+.++ + +++.....+ +-++.-++++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 45556665 45777888899999888778888776 444 6778888888888775 4 466655544 4455557999
Q ss_pred hcCEEEeCCC-CCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 477 GADFILIPSR-FEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 477 ~adi~l~pS~-~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
.||+.++.-. .++.|+.++ .+..|+||+.+.. .-..++.+.+. -+++ + -+.-|...+.++=+++.
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv-~Vlf---~-----~d~L~~~~v~e~~rql~--- 292 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGL-PVLF---T-----GDDLDEDIVREAQRQLA--- 292 (322)
T ss_pred hCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCC-eEEe---c-----CCcccHHHHHHHHHHHH---
Confidence 9999998764 489998776 5899999999964 44555555443 3333 0 02222222222111111
Q ss_pred CHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 555 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 555 ~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
..-++.+. |+-++..+.|.++|....
T Consensus 293 ------~~dk~~I~--Ff~pn~~~~W~~~l~~~~ 318 (322)
T PRK02797 293 ------SVDKNIIA--FFSPNYLQGWRNALAIAA 318 (322)
T ss_pred ------hhCcceee--ecCHhHHHHHHHHHHHhh
Confidence 11112233 999999999999998764
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0034 Score=59.00 Aligned_cols=131 Identities=18% Similarity=0.215 Sum_probs=72.4
Q ss_pred CcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccc
Q 007224 194 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQG 273 (612)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~ 273 (612)
|...+..-..-.+++.+++..|... -|.|| ||++|. ..--+++++..+ +++|++..+- ..|..
T Consensus 39 ~~~~~e~~~~rg~av~~a~~~L~~~-------Gf~PD-vI~~H~--GWGe~Lflkdv~------P~a~li~Y~E-~~y~~ 101 (171)
T PF12000_consen 39 YVRDFEAAVLRGQAVARAARQLRAQ-------GFVPD-VIIAHP--GWGETLFLKDVF------PDAPLIGYFE-FYYRA 101 (171)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHc-------CCCCC-EEEEcC--CcchhhhHHHhC------CCCcEEEEEE-EEecC
Confidence 4555555556666777766665432 36799 888874 223455677775 7888776543 11111
Q ss_pred cCCcccccccCCCcccccccccccCCCCCcCCcchhH-HHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeE
Q 007224 274 RFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW-MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK 352 (612)
Q Consensus 274 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~ 352 (612)
.- ...+++.++.... ......+..|. .-..+..+|..+++|.+.+..+-.. + +.+|.
T Consensus 102 ~g-----~d~~FDpe~p~~~------~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~fP~~----------~-r~kI~ 159 (171)
T PF12000_consen 102 SG-----ADVGFDPEFPPSL------DDRARLRMRNAHNLLALEQADAGISPTRWQRSQFPAE----------F-RSKIS 159 (171)
T ss_pred CC-----CcCCCCCCCCCCH------HHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhCCHH----------H-HcCcE
Confidence 10 1122222221100 00001112222 2335668999999999988764421 1 13999
Q ss_pred EeeCCCccCcc
Q 007224 353 GIVNGMDVQEW 363 (612)
Q Consensus 353 vI~Ngvd~~~~ 363 (612)
||+-|||++.+
T Consensus 160 VihdGiDt~~~ 170 (171)
T PF12000_consen 160 VIHDGIDTDRF 170 (171)
T ss_pred Eeecccchhhc
Confidence 99999998754
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.013 Score=63.90 Aligned_cols=179 Identities=14% Similarity=0.057 Sum_probs=113.4
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCc-hhHHHHHHHHHHHCC---CceEEEec
Q 007224 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYP---EKARGVAK 465 (612)
Q Consensus 392 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~---~~i~~~~~ 465 (612)
|+++|||.+ .++|+.--...|-...+++...++.+ |+..|++.|.|+ +...+.++++.++.+ .++++...
T Consensus 421 R~~lglp~~----avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLPED----AVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCCCC----eEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 788999843 24444444566766666666666655 888999888865 567888999998876 36666666
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCccc-----ce-ecCceEEEecccccccCCCCCCC
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD-----TV-EEGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e-----~v-~~g~~G~l~~~~~~~~~~v~~~d 539 (612)
-+.+.-.+-|.-||+++=+.-+ +-..+.+||+.+|+|||+-..--+.- ++ .-|..-++ ..+
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~v------------A~s 563 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELV------------ADS 563 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhh------------cCC
Confidence 6667666789999999965443 34578999999999999753211110 11 11222222 234
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHH----HH--hcCCcHHHHHHHHHHHHHHHHc
Q 007224 540 VAAVSTTVRRALATYGTQALAEMMKNG----MA--QDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 540 ~~~la~~l~~ll~~~~~~~~~~~~~~~----~~--~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
.++.++.-.++-.+ +..++ ..+.. +. --|+.+..+++++++|.++...
T Consensus 564 ~~dYV~~av~~g~d--ral~q-~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 564 RADYVEKAVAFGSD--RALRQ-QVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred HHHHHHHHHHhccc--HHHHH-hhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence 55555444444444 21222 22222 11 2588999999999999998754
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.011 Score=63.76 Aligned_cols=157 Identities=14% Similarity=0.127 Sum_probs=86.0
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEE-EEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
++++..|++...+. +.+-.++..+.+.+++++ ..|.+.. ...++ +.+.++......+. ..+++.||++|
T Consensus 227 ~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~g~~~~--~~~~~----~~~~~v~~~~~~p~---~~ll~~~~~~I 296 (392)
T TIGR01426 227 VVLISLGTVFNNQP-SFYRTCVEAFRDLDWHVVLSVGRGVD--PADLG----ELPPNVEVRQWVPQ---LEILKKADAFI 296 (392)
T ss_pred EEEEecCccCCCCH-HHHHHHHHHHhcCCCeEEEEECCCCC--hhHhc----cCCCCeEEeCCCCH---HHHHhhCCEEE
Confidence 45677888643321 232223333333455655 4555432 11222 23445654433343 25899999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH-H
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-Q 557 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~-~ 557 (612)
..+ | ..+++||+++|+|.|+....+ ..+.+.+.+.|..+. -+..+.++++++|++++.++.- +
T Consensus 297 ~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~--------~~~~~~~~l~~ai~~~l~~~~~~~ 364 (392)
T TIGR01426 297 THG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP--------PEEVTAEKLREAVLAVLSDPRYAE 364 (392)
T ss_pred ECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec--------cccCCHHHHHHHHHHHhcCHHHHH
Confidence 643 2 247899999999999976543 223344445676541 1234689999999999987321 2
Q ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHH
Q 007224 558 ALAEMMKNGMAQDLSWKGPAKKWEET 583 (612)
Q Consensus 558 ~~~~~~~~~~~~~~sw~~~a~~~~~~ 583 (612)
..+++.+. +.+.-.-+..++.++++
T Consensus 365 ~~~~l~~~-~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 365 RLRKMRAE-IREAGGARRAADEIEGF 389 (392)
T ss_pred HHHHHHHH-HHHcCCHHHHHHHHHHh
Confidence 22223222 33334555555555544
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.66 Score=50.53 Aligned_cols=215 Identities=13% Similarity=0.122 Sum_probs=114.5
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCC-CccccccccCcchhhcchHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPL-TDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~-~~~~~~~~~~~~~~~~~~~~~ 387 (612)
.+++..++.+|.|.+=-+...+.+.+ .|++.. ++.+.+ |+.+.-|. ..+. ..
T Consensus 168 ~l~r~vl~~~~~ItvRD~~S~~~Lk~---lGv~~~------~v~~~a---DpAF~L~~~~~~~---------------~~ 220 (426)
T PRK10017 168 QLANYVFGHCDALILRESVSLDLMKR---SNITTA------KVEHGV---DTAWLVDHHTEDF---------------TA 220 (426)
T ss_pred HHHHHHHhcCCEEEEccHHHHHHHHH---hCCCcc------ceEEec---ChhhhCCcccccc---------------cc
Confidence 45677788999988877777777775 676533 444433 44332221 1000 00
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcC-cccc-c--------CHHHHHHHHHhcccCCcEEEEEeCC------chhHHHHHHH
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGR-LEEQ-K--------GSDILAAAIPHFIKENVQIIVLGTG------KKPMEKQLEQ 451 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGr-l~~~-K--------g~d~ll~a~~~l~~~~~~lvivG~g------~~~~~~~l~~ 451 (612)
...+....+.+. ..++|++.=| +.+. | -...+.+++..+.+.+.+++++-.- .+......++
T Consensus 221 ~~~~~~~~~~~~--~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~ 298 (426)
T PRK10017 221 SYAVQHWLDVAA--QQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALN 298 (426)
T ss_pred chhhhhhhcccc--cCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHH
Confidence 001111112211 2346655433 3211 1 1245667777776667776665531 1112223344
Q ss_pred HHHHCCC--ceEE-EeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC-cccceec-CceEEEec
Q 007224 452 LEILYPE--KARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEE-GFTGFQMG 526 (612)
Q Consensus 452 l~~~~~~--~i~~-~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~-g~~G~l~~ 526 (612)
+...++. +... ...++..++..++++||++|-.-. -.++=|++.|+|+|+-.... +..++.+ |...+++
T Consensus 299 l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~- 372 (426)
T PRK10017 299 LRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAI- 372 (426)
T ss_pred HHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEe-
Confidence 4444432 1222 223555666679999999885433 25667999999999987532 1122211 1122322
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 007224 527 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 567 (612)
Q Consensus 527 ~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~ 567 (612)
-++.-+.+++.+.+.+++++ ++.+++..++++
T Consensus 373 -------~~~~l~~~~Li~~v~~~~~~--r~~~~~~l~~~v 404 (426)
T PRK10017 373 -------DIRHLLDGSLQAMVADTLGQ--LPALNARLAEAV 404 (426)
T ss_pred -------chhhCCHHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence 22556778999999999998 555555544444
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.021 Score=61.03 Aligned_cols=193 Identities=13% Similarity=0.144 Sum_probs=96.1
Q ss_pred HHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHH
Q 007224 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~ 389 (612)
.........|.+++.|+...+.+.+ .++.+.+ .++..|..-... +........+
T Consensus 127 ~~~~~~~~~d~~~~~s~~~~~~~~~--~f~~~~~--------~i~~~G~PR~D~----------------l~~~~~~~~~ 180 (369)
T PF04464_consen 127 NYKRNYRNYDYFIVSSEFEKEIFKK--AFGYPED--------KILVTGYPRNDY----------------LFNKSKENRN 180 (369)
T ss_dssp HHHHHHTT-SEEEESSHHHHHHHHH--HTT--GG--------GEEES--GGGHH----------------HHHSTT-HHH
T ss_pred hhhhhccCCcEEEECCHHHHHHHHH--HhccCcc--------eEEEeCCCeEhH----------------HhccCHHHHH
Confidence 3444567889999999999988885 3666543 234445532111 0011112256
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCH------H--HHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceE
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGS------D--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR 461 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~~~Kg~------d--~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~ 461 (612)
.+++.++++. ++.+|+|.=.+.....- . .-++.+..+...++.+++-.. +......... .....++.
T Consensus 181 ~i~~~~~~~~--~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~H--p~~~~~~~~~-~~~~~~i~ 255 (369)
T PF04464_consen 181 RIKKKLGIDK--DKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPH--PNMKKKFKDF-KEDNSNII 255 (369)
T ss_dssp HHHHHTT--S--S-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--S--HHHHTT-----TT-TTTEE
T ss_pred HHHHHhccCC--CCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeC--chhhhchhhh-hccCCcEE
Confidence 7888888764 44699998655432221 1 123333334446787777553 2233333332 22233344
Q ss_pred EEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc--CCCC-------cccceecCceEEEeccccccc
Q 007224 462 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA--STGG-------LVDTVEEGFTGFQMGSFSVDC 532 (612)
Q Consensus 462 ~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s--~~gg-------~~e~v~~g~~G~l~~~~~~~~ 532 (612)
.... .+...+++..||++|- -++-++.|++.+++|||-- |..- ..+ ..+..-|-.
T Consensus 256 ~~~~--~~~~~~ll~~aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg~~-------- 319 (369)
T PF04464_consen 256 FVSD--NEDIYDLLAAADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPGPI-------- 319 (369)
T ss_dssp E-TT---S-HHHHHHT-SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS-E--------
T ss_pred ECCC--CCCHHHHHHhcCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCCce--------
Confidence 3322 2346679999999993 3677999999999999954 3211 111 111122332
Q ss_pred CCCCCCCHHHHHHHHHHHHHh
Q 007224 533 EAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 533 ~~v~~~d~~~la~~l~~ll~~ 553 (612)
..+.++|.++|+.++++
T Consensus 320 ----~~~~~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 320 ----VYNFEELIEAIENIIEN 336 (369)
T ss_dssp ----ESSHHHHHHHHTTHHHH
T ss_pred ----eCCHHHHHHHHHhhhhC
Confidence 36899999999999886
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.066 Score=55.84 Aligned_cols=187 Identities=12% Similarity=0.060 Sum_probs=119.4
Q ss_pred CeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc
Q 007224 350 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 429 (612)
Q Consensus 350 ~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~ 429 (612)
....+++++|.+.|.|-++.. .-.--+.++|.-.+. .++.++++.
T Consensus 162 ~~~~~~~a~d~~~~~~i~~da------------------------------~~~~dL~~ign~~pD-----r~e~~ke~~ 206 (373)
T COG4641 162 NCYYLPWAVDDSLFHPIPPDA------------------------------SYDVDLNLIGNPYPD-----RVEEIKEFF 206 (373)
T ss_pred ceeccCccCCchhcccCCccc------------------------------cceeeeEEecCCCcc-----HHHHHHHHh
Confidence 577789999999888764210 111258888887665 344444442
Q ss_pred c-------CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccCh-HHHHHHHHhcCEEEeCCCC---CC---CcHHHH
Q 007224 430 K-------ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI-PLAHMIIAGADFILIPSRF---EP---CGLIQL 495 (612)
Q Consensus 430 ~-------~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~-~~~~~~l~~adi~l~pS~~---E~---~gl~~l 495 (612)
. .+-++.+.|..- -...+... .-.++...++.+. ...+..++.-|+.+.-++. ++ +.+-+.
T Consensus 207 ~~ps~kl~v~rr~~~~g~~y--~~~~~~~~---~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvF 281 (373)
T COG4641 207 VEPSFKLMVDRRFYVLGPRY--PDDIWGRT---WEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVF 281 (373)
T ss_pred hccchhhhccceeeecCCcc--chhhhccc---ccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHH
Confidence 2 135666777651 01111111 0111222233333 4455677788888776543 33 378899
Q ss_pred HHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhcCCcH
Q 007224 496 HAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWK 574 (612)
Q Consensus 496 EAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~-~~~~~~~~~~~~~~~~sw~ 574 (612)
|+|+||.+-|++..-++.-.+.+|..-++ ..|..++.+.++.++.... +.+..+.+.+.+...|+.+
T Consensus 282 eiagc~~~liT~~~~~~e~~f~pgk~~iv------------~~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~ 349 (373)
T COG4641 282 EIAGCGGFLITDYWKDLEKFFKPGKDIIV------------YQDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYE 349 (373)
T ss_pred HHhhcCCccccccHHHHHHhcCCchheEE------------ecCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHH
Confidence 99999999999988888888888866554 4799999999999999832 2344444445556669988
Q ss_pred HHHHHHHHHHHHHH
Q 007224 575 GPAKKWEETLLNLE 588 (612)
Q Consensus 575 ~~a~~~~~~y~~l~ 588 (612)
.-+.++.+...++.
T Consensus 350 ~r~~~~~~~i~sI~ 363 (373)
T COG4641 350 ERIFKLLNEIASIN 363 (373)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877777777644
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.17 Score=53.39 Aligned_cols=91 Identities=18% Similarity=0.087 Sum_probs=59.4
Q ss_pred cEEEEEcCc-c-cccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 404 PVIGFIGRL-E-EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~il~iGrl-~-~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
.+.++-|.- . -.+-...+++++.++.+...++++.+... . +.+++...+.. .+... . ....+++.||+.
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~-~~i~~~~~~~~-~~~~~----~-~~~~~m~~aDla 239 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--G-KDLKEIYGDIS-EFEIS----Y-DTHKALLEAEFA 239 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--H-HHHHHHHhcCC-CcEEe----c-cHHHHHHhhhHH
Confidence 344555542 2 24566778899999876557788877654 2 44444433322 12211 1 235689999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+.. .|.+-+|++.+|+|.|+.-
T Consensus 240 l~~-----SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 240 FIC-----SGTATLEAALIGTPFVLAY 261 (347)
T ss_pred Hhc-----CcHHHHHHHHhCCCEEEEE
Confidence 964 5889999999999999964
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.5 Score=49.12 Aligned_cols=163 Identities=15% Similarity=0.145 Sum_probs=106.4
Q ss_pred cEEEEEcC-cccccCHHHHHHHHHhcccCCcEEEE-EeCC--chhHHHHHHHHHHHC-C-CceEEEecc-ChHHHHHHHH
Q 007224 404 PVIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIV-LGTG--KKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 476 (612)
Q Consensus 404 ~~il~iGr-l~~~Kg~d~ll~a~~~l~~~~~~lvi-vG~g--~~~~~~~l~~l~~~~-~-~~i~~~~~~-~~~~~~~~l~ 476 (612)
+.-+.+|. -++.-++-.+++++.+....++++++ +|-| ++.|.+++.+.+.++ + +++.....+ +-++.-++++
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~ 264 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLS 264 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHH
Confidence 45555665 45677788888888876667888766 3444 467888888888775 4 245544433 5566667999
Q ss_pred hcCEEEeCCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC
Q 007224 477 GADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 477 ~adi~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 555 (612)
.||+.++.... .+.|+.++ .+.+|+||+.+........+.+..--+++ .-|.-|.+.+.++=+++..- +
T Consensus 265 ~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~~ipVlf--------~~d~L~~~~v~ea~rql~~~-d 334 (360)
T PF07429_consen 265 RCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQGIPVLF--------YGDELDEALVREAQRQLANV-D 334 (360)
T ss_pred hCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhCCCeEEe--------ccccCCHHHHHHHHHHHhhC-c
Confidence 99999999855 89998776 69999999999877766666555334444 11344455555544444432 1
Q ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 007224 556 TQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 556 ~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~ 586 (612)
. + .-.|.-.+..+.|...+.-
T Consensus 335 k--------~--~iaFf~pny~~~w~~~l~~ 355 (360)
T PF07429_consen 335 K--------Q--QIAFFAPNYLQGWRQALRL 355 (360)
T ss_pred c--------c--ceeeeCCchHHHHHHHHHH
Confidence 1 1 1236666777777776653
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.2 Score=49.60 Aligned_cols=102 Identities=12% Similarity=0.085 Sum_probs=54.9
Q ss_pred CCcEEEEEcCcccccCH--HHHHHHHHhc---cc-CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccC-----hHH
Q 007224 402 NIPVIGFIGRLEEQKGS--DILAAAIPHF---IK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-----IPL 470 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~--d~ll~a~~~l---~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~-----~~~ 470 (612)
...+-++||.-.+.-.+ |...+.+..+ .+ ....|++--+-. -...++++....-....+.++-+ .+.
T Consensus 161 rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR--Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY 238 (329)
T COG3660 161 RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR--TPDTVKSILKNNLNSSPGIVWNNEDTGYNPY 238 (329)
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC--CcHHHHHHHHhccccCceeEeCCCCCCCCch
Confidence 34688889876654333 3333333322 22 467777765532 12233333332111122222111 123
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
..+++.||.+|.+.. .=.-.-||.+.|+||-+.--
T Consensus 239 -~~~La~Adyii~TaD---SinM~sEAasTgkPv~~~~~ 273 (329)
T COG3660 239 -IDMLAAADYIISTAD---SINMCSEAASTGKPVFILEP 273 (329)
T ss_pred -HHHHhhcceEEEecc---hhhhhHHHhccCCCeEEEec
Confidence 359999999998755 33457899999999987653
|
|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0077 Score=64.81 Aligned_cols=81 Identities=11% Similarity=0.162 Sum_probs=45.7
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
.|| +||.|-..+++++.++.... ++|.+++.|.+.-.. +...++.+-.+...++- -..
T Consensus 401 ~Pd-lI~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLek~K-y~~s~~~w~e~e~~Yhf-------------s~q 458 (550)
T PF00862_consen 401 KPD-LIIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLEKTK-YEDSDLYWKEIEEKYHF-------------SCQ 458 (550)
T ss_dssp --S-EEEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-HHHH-HHTTTTTSHHHHHHH-H-------------HHH
T ss_pred CCc-EEEeccCcchHHHHHHHhhc-------CCceehhhhcccccc-ccccCCCHHHHHhhccc-------------hhh
Confidence 599 99999888899999998874 999999999775311 11111111011111100 012
Q ss_pred hhHHHHHHHhcCEEEecCHHHHH
Q 007224 308 INWMKAGILESDMVLTVSPHYAQ 330 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~ 330 (612)
+.-...++..||.|||.+.....
T Consensus 459 ftAd~iamn~adfIItST~QEI~ 481 (550)
T PF00862_consen 459 FTADLIAMNAADFIITSTYQEIA 481 (550)
T ss_dssp HHHHHHHHHHSSEEEESSHHHHH
T ss_pred hhHHHHHhhcCCEEEEcchHhhc
Confidence 22334568899999998876554
|
4.1.13 from EC in the following reaction: |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.27 Score=56.63 Aligned_cols=261 Identities=20% Similarity=0.240 Sum_probs=156.2
Q ss_pred CcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccc-cccCCCcccccccccccCCCCCcCCcc
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
.| +|-.||++.-++|-+++... .++++.+..|. .|+.... .-+- .
T Consensus 141 ~d-~vwihdyhlmllp~~lr~~~------~~~~ig~flhs-----pfpssEi~r~lp----------------------~ 186 (732)
T KOG1050|consen 141 GD-IVWIHDYHLMLLPQMLRERF------NSAKIGFFLHS-----PFPSSEIYRCLP----------------------V 186 (732)
T ss_pred CC-cEEEEcchhhccchhhhccc------ccceEEEeccC-----CCChHHHHHhcc----------------------c
Confidence 56 89999999999998888654 57788788883 3332111 1110 0
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccc-------------cCCccchhhhhccCeEEeeCCCccCccCCCCccccccc
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGE-------------DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVK 374 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~-------------~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~ 374 (612)
.+-.-.++..+|.+=.....++..+.+.. .-+++-. -+...+.++|-|+|+..|.-....+
T Consensus 187 r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~r--gr~~~v~~~pigid~~r~v~~~~~~---- 260 (732)
T KOG1050|consen 187 RKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGR--GRDVSVKALPIGIDVQRFVKLLELP---- 260 (732)
T ss_pred HHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEec--cceeeeeecccccchHHhhccccch----
Confidence 11112234455555544444443322200 0111100 0123567788888887764322100
Q ss_pred cCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCc----hh
Q 007224 375 YDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KP 444 (612)
Q Consensus 375 ~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~------~~~~lvivG~g~----~~ 444 (612)
.-..-..+++..+ .++.+|+-+-|+...||...=+.++.++.. ..+.++.+..+. +.
T Consensus 261 --------~~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~ 327 (732)
T KOG1050|consen 261 --------YVGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKE 327 (732)
T ss_pred --------hHHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchH
Confidence 0011123344333 256789999999999999887888877765 356666655543 11
Q ss_pred ---HHHHHHHHH----HHCCCc----eE-EEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcC----CceEEcC
Q 007224 445 ---MEKQLEQLE----ILYPEK----AR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG----TVPIVAS 508 (612)
Q Consensus 445 ---~~~~l~~l~----~~~~~~----i~-~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G----~PvI~s~ 508 (612)
.+.++.... .++... +. ..-.++..++-++++-+|+.++.+..+|..++.+|...|. .+-|.+.
T Consensus 328 v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlse 407 (732)
T KOG1050|consen 328 VEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSE 407 (732)
T ss_pred HHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEee
Confidence 222232222 233221 11 1123356666689999999999999999999999999873 6677777
Q ss_pred CCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 509 TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 509 ~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
.-|..++.+++. .+ +.|.|.++++..|..++..+
T Consensus 408 f~G~~~tl~d~a--iv----------vnpw~~~~~~~~i~~al~~s 441 (732)
T KOG1050|consen 408 FIGDDTTLEDAA--IV----------VNPWDGDEFAILISKALTMS 441 (732)
T ss_pred eccccccccccC--EE----------ECCcchHHHHHHHHHHhhcC
Confidence 777777776552 32 38999999999999999984
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.97 E-value=2.5 Score=44.01 Aligned_cols=136 Identities=13% Similarity=0.211 Sum_probs=73.7
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhccc-CCc---EEEEEeCCc-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK-ENV---QIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~---~lvivG~g~-~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ 477 (612)
..+++.+|.= .-|.+++-.++..... +++ -++|.|.-- ....+++...+.+.+. +. ...|..+. .+++++
T Consensus 220 ~~Ilvs~GGG--~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~-i~-I~~f~~~~-~~ll~g 294 (400)
T COG4671 220 FDILVSVGGG--ADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPH-IS-IFEFRNDF-ESLLAG 294 (400)
T ss_pred ceEEEecCCC--hhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCCC-eE-EEEhhhhH-HHHHHh
Confidence 3467777753 3354544444433322 333 356666643 3344555555554442 33 33454444 469999
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc-c-ceec---CceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-D-TVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e-~v~~---g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
|+..|.-+=+ ++..|-++.|+|.+.-....-. | ++.- .+-|+.= ..+=+.-.++.|+++|..+++
T Consensus 295 A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~d------vL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 295 ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVD------VLLPENLTPQNLADALKAALA 364 (400)
T ss_pred hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcce------eeCcccCChHHHHHHHHhccc
Confidence 9999953322 5778999999998876533222 2 2221 1223320 001133347889999988887
Q ss_pred h
Q 007224 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
-
T Consensus 365 ~ 365 (400)
T COG4671 365 R 365 (400)
T ss_pred C
Confidence 4
|
|
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.016 Score=59.01 Aligned_cols=45 Identities=16% Similarity=0.330 Sum_probs=39.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCc
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~ 130 (612)
|+|++|+...+|+ ..||++..+.+|.+.|-+.-..|..|++....
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~~~~ 45 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGANPED 45 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCCccc
Confidence 8999999999996 88999999999999998887888888877433
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.48 Score=49.32 Aligned_cols=103 Identities=17% Similarity=0.097 Sum_probs=66.7
Q ss_pred cEEEEEcCccccc--CHH---HHHHHHHhccc-CCcEEEEEeCC--chhHHHHHHHHHHHCCCceEEEecc-ChHHHHHH
Q 007224 404 PVIGFIGRLEEQK--GSD---ILAAAIPHFIK-ENVQIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMI 474 (612)
Q Consensus 404 ~~il~iGrl~~~K--g~d---~ll~a~~~l~~-~~~~lvivG~g--~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~~~ 474 (612)
.+.+.||.-+..- +.+ .+++.+..+.+ ...++.|..+- +++.++.++++....+. +..+..- ..+ ...+
T Consensus 148 ~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~~-~~~~~~~~~nP-y~~~ 225 (311)
T PF06258_consen 148 RVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNPG-VYIWDGTGENP-YLGF 225 (311)
T ss_pred eEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCCc-eEEecCCCCCc-HHHH
Confidence 4666788644322 334 55556655554 45788888874 45567777766654442 3222221 223 3469
Q ss_pred HHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC
Q 007224 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 511 (612)
Q Consensus 475 l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg 511 (612)
|+.||.++++.. .-.-+-||.+.|+||.+-...+
T Consensus 226 La~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 226 LAAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HHhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 999999999865 4456899999999999998766
|
The function of this family is unknown. |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=95.08 E-value=4.2 Score=40.92 Aligned_cols=152 Identities=14% Similarity=0.153 Sum_probs=78.0
Q ss_pred HHHHHhCCCCCCCCcEE---EEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHH-----------
Q 007224 390 ALQAEVGLPVDRNIPVI---GFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEI----------- 454 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i---l~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~----------- 454 (612)
..|..+... ..+... .|+||.+.+||+..+++.-++..+ ++..-++-|-....-.-.+.+-..
T Consensus 169 ~~Rstywkd--~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~ 246 (355)
T PF11440_consen 169 KYRSTYWKD--VSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCD 246 (355)
T ss_dssp HHHHHH-----GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGG
T ss_pred HHHHHHhhh--hHhhhcccceeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCcccccc
Confidence 344444432 233455 899999999999999999998876 678888877533111111111100
Q ss_pred --H-CC-CceEEEeccChHHHHHHHHhcCEEEeCCC------CCCCcHHHHHHHHcCCceEEc-CCCCccc-------ce
Q 007224 455 --L-YP-EKARGVAKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVA-STGGLVD-------TV 516 (612)
Q Consensus 455 --~-~~-~~i~~~~~~~~~~~~~~l~~adi~l~pS~------~E~~gl~~lEAma~G~PvI~s-~~gg~~e-------~v 516 (612)
+ .+ .-+...+.+-.++.-+.++.+-+...-+. .+..-.+.+|..|||+.+|-- ++|-... ++
T Consensus 247 ~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~ 326 (355)
T PF11440_consen 247 EPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYI 326 (355)
T ss_dssp G---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGG
T ss_pred CcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceee
Confidence 0 01 12333444555555568888888776553 245778999999999977654 3443222 22
Q ss_pred ecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 517 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 517 ~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.+.. |.+. +|..|.++-.+.|.++..+
T Consensus 327 ~~~~-~~I~---------~De~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 327 DHPY-SAIY---------FDENDLESTVEKLIEVANN 353 (355)
T ss_dssp SS---S-EE---------E-TTSHHHHHHHHHHHHT-
T ss_pred ccCc-ceeE---------eccchHHHHHHHHHHHhcc
Confidence 2222 3332 4888888877777777654
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=93.24 E-value=2 Score=47.51 Aligned_cols=107 Identities=13% Similarity=0.090 Sum_probs=65.0
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecCceEEEecccccccCCCCCCCHHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~ 548 (612)
+++...+-.+-+. || ++++||+++|+|+|+-... .....+.+-+.|+.+.....+ ..-+.+++.++|+
T Consensus 352 IL~H~~v~~FvtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~----~~~~~e~i~~av~ 424 (472)
T PLN02670 352 ILSHESVGGFLTH---CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD----GSFTSDSVAESVR 424 (472)
T ss_pred HhcCcccceeeec---CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC----CcCcHHHHHHHHH
Confidence 7888887655555 65 5899999999999997543 233444455677765211000 1246899999999
Q ss_pred HHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHH
Q 007224 549 RALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 549 ~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l 587 (612)
+++.+..-+.+++.+++. +.+.=+-+..++.+++.+.+.
T Consensus 425 ~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 425 LAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 999763222333333322 234444555566666555544
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.21 Score=42.42 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=57.6
Q ss_pred EEEEeCCchhHHHHHHHHHHHCCCceEEE---eccChHH--HHHHHHhcCEEEeCCCC---CCCcHHHHHHHHcCCceEE
Q 007224 435 IIVLGTGKKPMEKQLEQLEILYPEKARGV---AKFNIPL--AHMIIAGADFILIPSRF---EPCGLIQLHAMRYGTVPIV 506 (612)
Q Consensus 435 lvivG~g~~~~~~~l~~l~~~~~~~i~~~---~~~~~~~--~~~~l~~adi~l~pS~~---E~~gl~~lEAma~G~PvI~ 506 (612)
++|+|. .+.+...++++.++++..+..+ .++.... ++..+..||++|++..+ ...-.+--+|-.+|+|++-
T Consensus 2 vliVGG-~~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGG-REDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcC-CcccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 466775 2226788888888888777777 4444444 77799999999998765 3345567778889999999
Q ss_pred cCCCCcccc
Q 007224 507 ASTGGLVDT 515 (612)
Q Consensus 507 s~~gg~~e~ 515 (612)
++..|+..+
T Consensus 81 ~~~~~~~~l 89 (97)
T PF10087_consen 81 SRSRGVSSL 89 (97)
T ss_pred ECCCCHHHH
Confidence 986665443
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=93.11 E-value=1.4 Score=48.37 Aligned_cols=128 Identities=10% Similarity=0.046 Sum_probs=74.7
Q ss_pred cEEEEEcCcc---cccCHHHHHHHHHhcccCCcEEEE-EeCCch-hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 404 PVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 404 ~~il~iGrl~---~~Kg~d~ll~a~~~l~~~~~~lvi-vG~g~~-~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
.+++..|... +.+-+..++.+++++ ..+|++ +..+.. ...+.+ ....++++....+.+.. .+++..
T Consensus 275 vvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~~~---~~~~~~~~~v~~w~PQ~---~iL~h~ 345 (448)
T PLN02562 275 VIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPPGY---VERVSKQGKVVSWAPQL---EVLKHQ 345 (448)
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCHHH---HHHhccCEEEEecCCHH---HHhCCC
Confidence 5777788754 344556666666665 335554 332211 111111 11223334333332333 278888
Q ss_pred CEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 479 di~l~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
++.++-+. || ++.+||+.+|+|+|+-... .....+.+. +.|+-+ ...+.++++++|++++.
T Consensus 346 ~v~~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~----------~~~~~~~l~~~v~~~l~ 412 (448)
T PLN02562 346 AVGCYLTH---CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----------SGFGQKEVEEGLRKVME 412 (448)
T ss_pred ccceEEec---CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe----------CCCCHHHHHHHHHHHhC
Confidence 76555555 55 5899999999999987543 334444432 456654 44578999999999997
Q ss_pred h
Q 007224 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
+
T Consensus 413 ~ 413 (448)
T PLN02562 413 D 413 (448)
T ss_pred C
Confidence 6
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=93.00 E-value=2.2 Score=47.02 Aligned_cols=133 Identities=14% Similarity=0.135 Sum_probs=73.9
Q ss_pred CcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 403 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~il~iGrl~~--~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
..+++..|.... ..-+..++++++. .+..++++..++. ..+.+. .+++.... .|-... ++++..++
T Consensus 275 ~vvyvsfGs~~~~~~~~~~~~~~~l~~---~~~~~lw~~~~~~---~~~~~~---~~~~~~v~-~w~pQ~--~iL~h~~v 342 (459)
T PLN02448 275 SVLYVSLGSFLSVSSAQMDEIAAGLRD---SGVRFLWVARGEA---SRLKEI---CGDMGLVV-PWCDQL--KVLCHSSV 342 (459)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHh---CCCCEEEEEcCch---hhHhHh---ccCCEEEe-ccCCHH--HHhccCcc
Confidence 356677787642 2224444444444 4778887665431 112222 12223323 343222 37888887
Q ss_pred EEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 481 ILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 481 ~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
..+-+. +| ++++||+++|+|+|+-...+ ....+.+. +.|+-+.... + .-+..+.+++++++++++.+
T Consensus 343 ~~fvtH---gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~-~--~~~~~~~~~l~~av~~vl~~ 415 (459)
T PLN02448 343 GGFWTH---CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREV-G--EETLVGREEIAELVKRFMDL 415 (459)
T ss_pred ceEEec---CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEeccc-c--cCCcCcHHHHHHHHHHHhcC
Confidence 544444 44 58999999999999986543 33334432 3566541000 0 00134789999999999975
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=92.34 E-value=14 Score=37.49 Aligned_cols=90 Identities=17% Similarity=0.294 Sum_probs=56.0
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEE-EEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
+++..|.= ..|+ +..+.+..+...++.+- ++|.+.+.+.+ +.+...+++. +..+ .+.+.+..++..||..|.
T Consensus 161 ilI~lGGs-Dpk~--lt~kvl~~L~~~~~nl~iV~gs~~p~l~~-l~k~~~~~~~-i~~~--~~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGGS-DPKN--LTLKVLAELEQKNVNLHIVVGSSNPTLKN-LRKRAEKYPN-INLY--IDTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccCC-Chhh--hHHHHHHHhhccCeeEEEEecCCCcchhH-HHHHHhhCCC-eeeE--ecchhHHHHHHhcchhee
Confidence 56666653 3443 45566666655455543 45665554444 4444455553 3332 234556679999999985
Q ss_pred CCCCCCCcHHHHHHHHcCCceEE
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIV 506 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~ 506 (612)
.-|.++.||...|+|.++
T Consensus 234 -----AaGstlyEa~~lgvP~l~ 251 (318)
T COG3980 234 -----AAGSTLYEALLLGVPSLV 251 (318)
T ss_pred -----ccchHHHHHHHhcCCceE
Confidence 468999999999999433
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=91.81 E-value=8.2 Score=40.80 Aligned_cols=102 Identities=13% Similarity=-0.034 Sum_probs=64.2
Q ss_pred CcEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCC-CceE-EEeccChHHHHHHHHhc
Q 007224 403 IPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKAR-GVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~--d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~i~-~~~~~~~~~~~~~l~~a 478 (612)
..+++..|.-.+.|.+ +.+.+.+..+.+.+++++++|...+......+++..... ..+. ..+..+-.++..+++.|
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a 263 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDHA 263 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHhC
Confidence 3566677765667764 467777777766688999998654322333444544322 1222 23344556677899999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
|++|-.-. ..+-=|.++|+|+|+--.
T Consensus 264 ~l~v~nDS-----Gp~HlAaA~g~P~v~lfG 289 (352)
T PRK10422 264 QLFIGVDS-----APAHIAAAVNTPLICLFG 289 (352)
T ss_pred CEEEecCC-----HHHHHHHHcCCCEEEEEC
Confidence 99995432 223336789999998753
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=91.39 E-value=2.1 Score=44.92 Aligned_cols=112 Identities=19% Similarity=0.199 Sum_probs=69.5
Q ss_pred HHHHHHHhCCCCCCCCcE-EEEEcC-cccccCHH--HHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEE-
Q 007224 388 KEALQAEVGLPVDRNIPV-IGFIGR-LEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG- 462 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~-il~iGr-l~~~Kg~d--~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~- 462 (612)
.+.+..+++++. ++++ ++..|. ..+.|.+. .+.+.+..+.+.+.+++++|+..+ ++..+++....+..+..
T Consensus 161 ~~~~~~~~~~~~--~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e--~~~~~~i~~~~~~~~~~l 236 (334)
T TIGR02195 161 QAAALAKFGLDT--ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKD--HPAGNEIEALLPGELRNL 236 (334)
T ss_pred HHHHHHHcCCCC--CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhh--HHHHHHHHHhCCcccccC
Confidence 334556666642 2344 445554 44666544 777777777666789999997652 34445555544433332
Q ss_pred EeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.+..+-.++..+++.||++|-.-. ..+-=|.+.|+|+|+--
T Consensus 237 ~g~~sL~el~ali~~a~l~I~~DS-----Gp~HlAaA~~~P~i~lf 277 (334)
T TIGR02195 237 AGETSLDEAVDLIALAKAVVTNDS-----GLMHVAAALNRPLVALY 277 (334)
T ss_pred CCCCCHHHHHHHHHhCCEEEeeCC-----HHHHHHHHcCCCEEEEE
Confidence 234455667789999999996432 22333779999999864
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.99 Score=41.97 Aligned_cols=20 Identities=20% Similarity=0.233 Sum_probs=17.0
Q ss_pred HHhcCEEEecCHHHHHHHHc
Q 007224 315 ILESDMVLTVSPHYAQELVS 334 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~ 334 (612)
..-||+|++.|.+..+.+.+
T Consensus 117 aLaAD~v~FNS~~nr~sFL~ 136 (168)
T PF12038_consen 117 ALAADRVVFNSAFNRDSFLD 136 (168)
T ss_pred HHhceeeeecchhhHHHHHH
Confidence 45899999999999888764
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=91.02 E-value=1.3 Score=41.66 Aligned_cols=26 Identities=19% Similarity=0.331 Sum_probs=22.8
Q ss_pred HhcCEEEecCHHHHHHHHccccCCccchh
Q 007224 316 LESDMVLTVSPHYAQELVSGEDKGVELDN 344 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~ 344 (612)
..+|..++.|+..++++.+ .|++.++
T Consensus 136 ~~~D~y~Vase~~~~~l~~---~Gi~~~~ 161 (169)
T PF06925_consen 136 PGVDRYFVASEEVKEELIE---RGIPPER 161 (169)
T ss_pred CCCCEEEECCHHHHHHHHH---cCCChhH
Confidence 3689999999999999997 8998773
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=90.66 E-value=4.4 Score=44.56 Aligned_cols=69 Identities=20% Similarity=0.177 Sum_probs=47.9
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecC-ceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++..++-.+-+. || ++++||+++|+|+|+-... .....+.+. +.|+.+. ..-+.++++++|
T Consensus 337 iL~h~~v~~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~---------~~~~~~~v~~av 404 (451)
T PLN02410 337 VLSHPAVGGFWSH---CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE---------GDLDRGAVERAV 404 (451)
T ss_pred HhCCCccCeeeec---CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC---------CcccHHHHHHHH
Confidence 7888776444444 55 5899999999999997543 233444433 5677551 234789999999
Q ss_pred HHHHHhh
Q 007224 548 RRALATY 554 (612)
Q Consensus 548 ~~ll~~~ 554 (612)
++++.+.
T Consensus 405 ~~lm~~~ 411 (451)
T PLN02410 405 KRLMVEE 411 (451)
T ss_pred HHHHcCC
Confidence 9999763
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=90.09 E-value=2.9 Score=41.56 Aligned_cols=101 Identities=14% Similarity=0.034 Sum_probs=60.4
Q ss_pred CcEEEEEcCcccccCHHH--HHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceE-EEeccChHHHHHHHHhcC
Q 007224 403 IPVIGFIGRLEEQKGSDI--LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR-GVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~--ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~-~~~~~~~~~~~~~l~~ad 479 (612)
..+++..|.-.+.|.+.. ..+.+..+.+..++++++|...+..++..+++....+..+. ..+..+-.+...+++.||
T Consensus 106 ~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a~ 185 (247)
T PF01075_consen 106 PYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRAD 185 (247)
T ss_dssp SEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTSS
T ss_pred CeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcCC
Confidence 346666776667776544 88888888776689999998775445555566655442233 334456666778999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
++|-+-. -.+-=|.+.|+|+|+--
T Consensus 186 ~~I~~Dt-----g~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 186 LVIGNDT-----GPMHLAAALGTPTVALF 209 (247)
T ss_dssp EEEEESS-----HHHHHHHHTT--EEEEE
T ss_pred EEEecCC-----hHHHHHHHHhCCEEEEe
Confidence 9996543 23344788999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=89.16 E-value=21 Score=37.54 Aligned_cols=101 Identities=12% Similarity=0.049 Sum_probs=62.9
Q ss_pred cEEEEEcCcccccC--HHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCC-ceEE-EeccChHHHHHHHHhcC
Q 007224 404 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARG-VAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~il~iGrl~~~Kg--~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~i~~-~~~~~~~~~~~~l~~ad 479 (612)
.+++..|.-.+.|. .+.+.+.+..+.+.+.+++++|...+...+..+++....+. .+.. .+..+-.++..+++.||
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~ 262 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHAR 262 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCC
Confidence 45566665445664 45677777777656789999986543233344455444332 2332 33445566778999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
++|-.-. ..+-=|.|.|+|+|+--.
T Consensus 263 l~Vs~DS-----Gp~HlAaA~g~p~v~Lfg 287 (344)
T TIGR02201 263 LFIGVDS-----VPMHMAAALGTPLVALFG 287 (344)
T ss_pred EEEecCC-----HHHHHHHHcCCCEEEEEC
Confidence 9996532 233337889999998743
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=89.13 E-value=5.6 Score=43.72 Aligned_cols=137 Identities=11% Similarity=-0.003 Sum_probs=76.1
Q ss_pred CcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEEeCCch-------hHHHHH-HHHHHHCC-CceEEEeccChHHH
Q 007224 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKK-------PMEKQL-EQLEILYP-EKARGVAKFNIPLA 471 (612)
Q Consensus 403 ~~~il~iGrl~--~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~-------~~~~~l-~~l~~~~~-~~i~~~~~~~~~~~ 471 (612)
..+++..|.+. +.+-...|..+++.. ...|+++=..+. .....+ +.+.++.. .++....+.+...
T Consensus 271 sVvyvsfGS~~~~~~~q~~ela~gL~~s---~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~- 346 (451)
T PLN03004 271 SVVFLCFGSLGLFSKEQVIEIAVGLEKS---GQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVP- 346 (451)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHH-
Confidence 45677778763 344555666666655 335554443220 011101 11112111 2233333334433
Q ss_pred HHHHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCC----CCcccceec-CceEEEecccccccCCCCCCCHHHHHH
Q 007224 472 HMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVAST----GGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 472 ~~~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~----gg~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~ 545 (612)
+++.+++..+-+. || ++++||+++|+|+|+-.. ......+.+ -+.|+.+... +. ..-+.+++++
T Consensus 347 --iL~H~~v~~FvTH---~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~--~~---~~~~~e~l~~ 416 (451)
T PLN03004 347 --VLNHKAVGGFVTH---CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES--ET---GFVSSTEVEK 416 (451)
T ss_pred --HhCCCccceEecc---CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC--cC---CccCHHHHHH
Confidence 8999998665555 55 589999999999999854 334444443 3567765100 00 0237899999
Q ss_pred HHHHHHHh
Q 007224 546 TVRRALAT 553 (612)
Q Consensus 546 ~l~~ll~~ 553 (612)
+|++++.+
T Consensus 417 av~~vm~~ 424 (451)
T PLN03004 417 RVQEIIGE 424 (451)
T ss_pred HHHHHhcC
Confidence 99999975
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=88.97 E-value=11 Score=39.09 Aligned_cols=98 Identities=12% Similarity=0.114 Sum_probs=62.8
Q ss_pred cEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 404 PVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~--d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
.++++.|.=.+.|.+ +.+.+.+..+.+.+.+++++|.++. ..+..+++....+. ....+..+-.++..+++.||++
T Consensus 181 ~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e~~~~~~i~~~~~~-~~l~g~~sL~el~ali~~a~l~ 258 (319)
T TIGR02193 181 YAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-EKQRAERIAEALPG-AVVLPKMSLAEVAALLAGADAV 258 (319)
T ss_pred EEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHhhCCC-CeecCCCCHHHHHHHHHcCCEE
Confidence 455666654566765 5777888777656789888864442 23444555555443 2223445556677899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
|-.-. . .+-=|.+.|+|+|+--
T Consensus 259 I~~DS---g--p~HlAaa~g~P~i~lf 280 (319)
T TIGR02193 259 VGVDT---G--LTHLAAALDKPTVTLY 280 (319)
T ss_pred EeCCC---h--HHHHHHHcCCCEEEEE
Confidence 96543 2 2333678899999865
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=88.76 E-value=7.5 Score=43.18 Aligned_cols=141 Identities=13% Similarity=0.052 Sum_probs=71.7
Q ss_pred CCcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEE-EeCCch------hHHHHHHHHHHHCCCceEEEeccChHHHH
Q 007224 402 NIPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIV-LGTGKK------PMEKQLEQLEILYPEKARGVAKFNIPLAH 472 (612)
Q Consensus 402 ~~~~il~iGrl~~--~Kg~d~ll~a~~~l~~~~~~lvi-vG~g~~------~~~~~l~~l~~~~~~~i~~~~~~~~~~~~ 472 (612)
+..+++..|.... .+....++++++.+ +.+|++ ++.... ...+.+++... +.++....+.+..
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~~--~~g~~v~~w~PQ~--- 356 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGS---GQNFIWVVRKNENQGEKEEWLPEGFEERTK--GKGLIIRGWAPQV--- 356 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHC---CCCEEEEEecCCcccchhhcCCHHHHHHhc--cCCEEEecCCCHH---
Confidence 3356777887643 33444444554444 445444 343110 01111111111 2234433333443
Q ss_pred HHHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CceEEEecccccccCCCCCCCHHHHHHH
Q 007224 473 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 473 ~~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~ 546 (612)
.+++.+++-++-+. || ++++||+++|+|+|+-...+ ....+.+ -..|+-++....--..-+.-+.++++++
T Consensus 357 ~iL~h~~v~~fvtH---~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~a 433 (482)
T PLN03007 357 LILDHQATGGFVTH---CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKA 433 (482)
T ss_pred HHhccCccceeeec---CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHH
Confidence 37888887555454 54 58999999999999986433 2222221 1334433210000000023478999999
Q ss_pred HHHHHHh
Q 007224 547 VRRALAT 553 (612)
Q Consensus 547 l~~ll~~ 553 (612)
|++++.+
T Consensus 434 v~~~m~~ 440 (482)
T PLN03007 434 VREVIVG 440 (482)
T ss_pred HHHHhcC
Confidence 9999976
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=88.67 E-value=1.8 Score=48.06 Aligned_cols=126 Identities=17% Similarity=0.140 Sum_probs=71.1
Q ss_pred CCcEEEEEcCccc---ccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 402 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~il~iGrl~~---~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
+..+++..|.+.. .+-.+.++++++++ +. ++++.-++.. ...+ +.++...-+.+.. ++++..
T Consensus 276 ~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~--~~-~~iW~~~~~~-----~~~l----~~n~~~~~W~PQ~---~lL~hp 340 (500)
T PF00201_consen 276 KGVVYVSFGSIVSSMPEEKLKEIAEAFENL--PQ-RFIWKYEGEP-----PENL----PKNVLIVKWLPQN---DLLAHP 340 (500)
T ss_dssp TEEEEEE-TSSSTT-HHHHHHHHHHHHHCS--TT-EEEEEETCSH-----GCHH----HTTEEEESS--HH---HHHTST
T ss_pred CCEEEEecCcccchhHHHHHHHHHHHHhhC--CC-cccccccccc-----cccc----cceEEEeccccch---hhhhcc
Confidence 3456677788642 22245567777766 33 7777665531 1112 2235333333432 378777
Q ss_pred CEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 479 DFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 479 di~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.+-++-+. +| ++++||+.+|+|+|+-..-| ....+.+.+.|..+. ...-+.+++.++|.+++++
T Consensus 341 ~v~~fitH---gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~--------~~~~~~~~l~~ai~~vl~~ 409 (500)
T PF00201_consen 341 RVKLFITH---GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLD--------KNDLTEEELRAAIREVLEN 409 (500)
T ss_dssp TEEEEEES-----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEG--------GGC-SHHHHHHHHHHHHHS
T ss_pred cceeeeec---cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEE--------ecCCcHHHHHHHHHHHHhh
Confidence 66555454 55 58999999999999986432 344455555677651 1233579999999999998
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.50 E-value=13 Score=41.23 Aligned_cols=74 Identities=16% Similarity=0.026 Sum_probs=47.3
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCC----Ccccce-ecCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v-~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++..++..+-+. || ++.+||+.+|+|+|+-..- -....+ +.-+.|+.+.....+ -+.-+.++++++|
T Consensus 352 iL~h~~vg~fvtH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~---~~~~~~e~l~~av 425 (480)
T PLN00164 352 ILAHAAVGGFVTH---CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKR---DNFVEAAELERAV 425 (480)
T ss_pred HhcCcccCeEEee---cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccccc---CCcCcHHHHHHHH
Confidence 7888886555454 55 5899999999999997532 233333 333567654100000 0113679999999
Q ss_pred HHHHHh
Q 007224 548 RRALAT 553 (612)
Q Consensus 548 ~~ll~~ 553 (612)
++++.+
T Consensus 426 ~~vm~~ 431 (480)
T PLN00164 426 RSLMGG 431 (480)
T ss_pred HHHhcC
Confidence 999975
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=88.47 E-value=3.2 Score=42.21 Aligned_cols=102 Identities=16% Similarity=0.161 Sum_probs=64.7
Q ss_pred EEEEEcCccccc--CHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHC-CCceE-EEeccChHHHHHHHHhcCE
Q 007224 405 VIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY-PEKAR-GVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~il~iGrl~~~K--g~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~-~~~i~-~~~~~~~~~~~~~l~~adi 480 (612)
+++..|.-.+.| ..+.+.+.++.+.+.+++++++|... .++..+++.... ..++. .....+-.+...+++.||+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 444555545555 45678888888876689999998755 344555555544 12222 2333345666789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 513 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 513 (612)
+|-+.. |..-+ |.+.|+|+|+--.....
T Consensus 202 ~I~~Ds----g~~Hl-A~a~~~p~i~l~g~~~~ 229 (279)
T cd03789 202 VVTNDS----GPMHL-AAALGTPTVALFGPTDP 229 (279)
T ss_pred EEeeCC----HHHHH-HHHcCCCEEEEECCCCc
Confidence 996542 34333 46999999988644333
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=88.37 E-value=9.7 Score=41.94 Aligned_cols=138 Identities=12% Similarity=0.097 Sum_probs=75.0
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEE-EeCCc-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvi-vG~g~-~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
..+++..|.+... ..+.+-+.+..|...+.+|++ ++... ......+++... +++.. ...|-... .+++.+++
T Consensus 270 svvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~--~~~g~-v~~w~PQ~--~iL~h~~v 343 (456)
T PLN02210 270 SVVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK--EGQGV-VLEWSPQE--KILSHMAI 343 (456)
T ss_pred ceEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc--CCCeE-EEecCCHH--HHhcCcCc
Confidence 3567777876532 334444444444444556655 34221 111122222221 12222 23443332 38888885
Q ss_pred EEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 481 ILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 481 ~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
..+-+. || ++++||+.+|+|+|+-...+ ....+.+ -+.|+.+.....+ ..-+.++++++|++++.+
T Consensus 344 g~FitH---~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~----~~~~~~~l~~av~~~m~~ 415 (456)
T PLN02210 344 SCFVTH---CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVD----GELKVEEVERCIEAVTEG 415 (456)
T ss_pred CeEEee---CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccC----CcCCHHHHHHHHHHHhcC
Confidence 554444 55 48999999999999976433 3334444 3577765210000 124789999999999975
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=88.31 E-value=2.5 Score=34.91 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=24.8
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecC
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNI 269 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~ 269 (612)
+.| |||.|...+.+..-.+.... ..|.|+|||-|++
T Consensus 50 ~I~-IVHgH~a~S~l~hE~i~hA~-----~mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RID-IVHGHQAFSTLCHEAILHAR-----TMGLKTVFTDHSL 85 (90)
T ss_pred Cee-EEEeehhhhHHHHHHHHHHH-----hCCCcEEeecccc
Confidence 578 99999876665543333221 2699999999953
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=88.05 E-value=0.2 Score=46.78 Aligned_cols=80 Identities=16% Similarity=0.238 Sum_probs=47.1
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCc--------ccceecCceEEEecccccccCCCCCCCHHH
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 542 (612)
+.++++.||++|. + +-+.++.|++++|+|.|.-...+. ...+.+...|..+ .-...+++.
T Consensus 66 m~~~m~~aDlvIs--~--aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~--------~~~~~~~~~ 133 (167)
T PF04101_consen 66 MAELMAAADLVIS--H--AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML--------DESELNPEE 133 (167)
T ss_dssp HHHHHHHHSEEEE--C--S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS--------ECCC-SCCC
T ss_pred HHHHHHHcCEEEe--C--CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc--------CcccCCHHH
Confidence 5679999998883 2 345799999999999988765542 1222233334432 012334688
Q ss_pred HHHHHHHHHHhhCHHHHHHHHH
Q 007224 543 VSTTVRRALATYGTQALAEMMK 564 (612)
Q Consensus 543 la~~l~~ll~~~~~~~~~~~~~ 564 (612)
|.++|..++.+ +....+|.+
T Consensus 134 L~~~i~~l~~~--~~~~~~~~~ 153 (167)
T PF04101_consen 134 LAEAIEELLSD--PEKLKEMAK 153 (167)
T ss_dssp HHHHHHCHCCC--HH-SHHHCC
T ss_pred HHHHHHHHHcC--cHHHHHHHH
Confidence 99999999887 444444433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=87.36 E-value=7.7 Score=42.58 Aligned_cols=137 Identities=8% Similarity=0.106 Sum_probs=72.9
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
.+++..|.... -..+.+.+.+.-|...++-.++-.+......+.+.+.. .+.++... .|-... ++++..++..+
T Consensus 266 vvyvsfGS~~~-~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~--~~~~~~i~-~W~PQ~--~iL~H~~v~~F 339 (449)
T PLN02173 266 VVYIAFGSMAK-LSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETV--DKDKSLVL-KWSPQL--QVLSNKAIGCF 339 (449)
T ss_pred eEEEEeccccc-CCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhh--cCCceEEe-CCCCHH--HHhCCCccceE
Confidence 56667787642 23345555555553334322222111111111111111 12334444 343322 38888886666
Q ss_pred CCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 484 PSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-+. || ++++||+++|+|+|+-..-+ ....+.+. +.|+-+.....+ ..-+.+++.+++++++.+
T Consensus 340 vtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~----~~~~~e~v~~av~~vm~~ 408 (449)
T PLN02173 340 MTH---CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKES----GIAKREEIEFSIKEVMEG 408 (449)
T ss_pred Eec---CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccC----CcccHHHHHHHHHHHhcC
Confidence 565 55 68999999999999986432 33444443 466654210000 012789999999999975
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=87.04 E-value=9.4 Score=42.31 Aligned_cols=134 Identities=10% Similarity=-0.012 Sum_probs=68.7
Q ss_pred CcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCchh-------HHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007224 403 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKP-------MEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 403 ~~~il~iGrl~~--~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~-------~~~~l~~l~~~~~~~i~~~~~~~~~~~~~ 473 (612)
..+++..|.+.. .+....++++++.. +.+|+++-..+.. .-..+++... +..+....+.+.. .
T Consensus 284 svVyvsfGS~~~~~~~~~~ela~gL~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~~--~~g~~v~~w~PQ~---~ 355 (477)
T PLN02863 284 KVVYVCFGSQVVLTKEQMEALASGLEKS---GVHFIWCVKEPVNEESDYSNIPSGFEDRVA--GRGLVIRGWAPQV---A 355 (477)
T ss_pred ceEEEEeeceecCCHHHHHHHHHHHHhC---CCcEEEEECCCcccccchhhCCHHHHHHhc--cCCEEecCCCCHH---H
Confidence 356677787643 22345555555544 5566555432110 1111111111 1123332333332 3
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++...+-++-+. || ++.+||+++|+|+|+-...+ ....+.+ -+.|+-+... +- ...+.+++.+++
T Consensus 356 vL~h~~v~~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~--~~---~~~~~~~v~~~v 427 (477)
T PLN02863 356 ILSHRAVGAFLTH---CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEG--AD---TVPDSDELARVF 427 (477)
T ss_pred HhcCCCcCeEEec---CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccC--CC---CCcCHHHHHHHH
Confidence 7777544444344 44 58999999999999975432 3333333 2567654110 00 123678999999
Q ss_pred HHHHH
Q 007224 548 RRALA 552 (612)
Q Consensus 548 ~~ll~ 552 (612)
.+++.
T Consensus 428 ~~~m~ 432 (477)
T PLN02863 428 MESVS 432 (477)
T ss_pred HHHhh
Confidence 98884
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=86.96 E-value=17 Score=39.80 Aligned_cols=73 Identities=7% Similarity=0.043 Sum_probs=49.2
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++...+-++-+. || ++++||+++|+|+|+-..-+ ....+.+ -+.|+.+.... + ..-+.+++.++|
T Consensus 324 iL~H~~v~~FvtH---cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~-~----~~~~~~~l~~ai 395 (442)
T PLN02208 324 ILDHPSIGCFVNH---CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK-T----GWFSKESLSNAI 395 (442)
T ss_pred HhcCCccCeEEcc---CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc-C----CcCcHHHHHHHH
Confidence 7888887666665 66 58999999999999975432 3333333 35676552100 0 014789999999
Q ss_pred HHHHHhh
Q 007224 548 RRALATY 554 (612)
Q Consensus 548 ~~ll~~~ 554 (612)
++++++.
T Consensus 396 ~~~m~~~ 402 (442)
T PLN02208 396 KSVMDKD 402 (442)
T ss_pred HHHhcCC
Confidence 9999763
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=86.52 E-value=25 Score=36.12 Aligned_cols=100 Identities=14% Similarity=0.002 Sum_probs=59.5
Q ss_pred cEEEEEcCcc---cccCHHHHHHHHHhcccC-CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 404 PVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~il~iGrl~---~~Kg~d~ll~a~~~l~~~-~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
+.|++.-|-. ..+..+.+.+++..+.+. +.+++++.-....-.+..+++..+.+.........+.++.-.++++||
T Consensus 173 ~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~ 252 (298)
T TIGR03609 173 PVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASAR 252 (298)
T ss_pred CeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCC
Confidence 4565554431 122355777778877653 777766654322223445556555443222223335556667999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
++|-... -..+=|+.+|+|+|+-+
T Consensus 253 ~vI~~Rl-----H~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 253 LVIGMRL-----HALILAAAAGVPFVALS 276 (298)
T ss_pred EEEEech-----HHHHHHHHcCCCEEEee
Confidence 8885554 25666999999999765
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=86.26 E-value=13 Score=41.30 Aligned_cols=75 Identities=16% Similarity=0.066 Sum_probs=45.1
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----ccc-ceecCceEEEecccc-cccCCCCCCCHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVD-TVEEGFTGFQMGSFS-VDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e-~v~~g~~G~l~~~~~-~~~~~v~~~d~~~la~~ 546 (612)
+++...+-.+-+. || ++.+||+++|+|+|+-...+ ... ++..-+.|+.+.... .+- -...+.++++++
T Consensus 353 iL~h~~vg~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~--~~~~~~~~l~~a 427 (475)
T PLN02167 353 ILAHKAIGGFVSH---CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAY--GEIVKADEIAGA 427 (475)
T ss_pred HhcCcccCeEEee---CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccccc--CCcccHHHHHHH
Confidence 7877654333333 55 48999999999999886432 221 233445576551100 000 012368999999
Q ss_pred HHHHHHh
Q 007224 547 VRRALAT 553 (612)
Q Consensus 547 l~~ll~~ 553 (612)
|++++.+
T Consensus 428 v~~~m~~ 434 (475)
T PLN02167 428 VRSLMDG 434 (475)
T ss_pred HHHHhcC
Confidence 9999965
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=86.22 E-value=16 Score=38.41 Aligned_cols=98 Identities=20% Similarity=0.183 Sum_probs=68.9
Q ss_pred cEEEEEc-CcccccCHH--HHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 404 PVIGFIG-RLEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 404 ~~il~iG-rl~~~Kg~d--~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
.+++..| .-...|.+. .+.+.++.+.....+++++|... .++..+++...+++.+...+..+-.++..+++.||+
T Consensus 177 ~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~--e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 177 YIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD--EEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred eEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH--HHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 3555567 555677644 77788888877679999999873 577778888777643333444455667779999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+|.+.. | ..-=|.+.|+|+|+--
T Consensus 255 ~I~~DS----g-~~HlAaA~~~P~I~iy 277 (334)
T COG0859 255 VIGNDS----G-PMHLAAALGTPTIALY 277 (334)
T ss_pred EEccCC----h-HHHHHHHcCCCEEEEE
Confidence 996543 2 2333788999999975
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=85.24 E-value=22 Score=39.35 Aligned_cols=139 Identities=11% Similarity=0.031 Sum_probs=72.5
Q ss_pred CcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEEeCCchh-HHHHH-HHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKP-MEKQL-EQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~il~iGrl~--~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~-~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
..+.+..|.+. ..+-...++.+++.+ +.+|+++=..+.. ..+.+ +.+.++.+++.... .|-... ++++..
T Consensus 276 sVVyvSfGS~~~~~~~q~~ela~~l~~~---~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~-~W~PQ~--~IL~H~ 349 (468)
T PLN02207 276 SVVFLCFGSMGRLRGPLVKEIAHGLELC---QYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMIC-GWSPQV--EILAHK 349 (468)
T ss_pred cEEEEEeccCcCCCHHHHHHHHHHHHHC---CCcEEEEEeCCCccccccCCHHHHhhcCCCeEEE-EeCCHH--HHhccc
Confidence 35666678754 233455666666655 3355543322110 00000 12222223334323 443332 278887
Q ss_pred CEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CceEEEeccc-ccccCCCCCCCHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSF-SVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 479 di~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~-~~~~~~v~~~d~~~la~~l~~ll 551 (612)
.+..+-+. || ++.+||+.+|+|+|+-...+ ....+.+ -+.|+-++.. ..+. -+.-+.+++.++|++++
T Consensus 350 ~vg~FvTH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~--~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 350 AVGGFVSH---CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHS--DEIVNANEIETAIRCVM 424 (468)
T ss_pred ccceeeec---CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEeccccccc--CCcccHHHHHHHHHHHH
Confidence 77555454 55 47999999999999986433 3333222 3456643110 0000 01237789999999999
Q ss_pred H
Q 007224 552 A 552 (612)
Q Consensus 552 ~ 552 (612)
.
T Consensus 425 ~ 425 (468)
T PLN02207 425 N 425 (468)
T ss_pred h
Confidence 6
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=84.94 E-value=17 Score=40.07 Aligned_cols=137 Identities=12% Similarity=0.110 Sum_probs=75.2
Q ss_pred CcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEE-EeCCc-------hhHH---HHHHHHHHHCCCceEEEeccChH
Q 007224 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIV-LGTGK-------KPME---KQLEQLEILYPEKARGVAKFNIP 469 (612)
Q Consensus 403 ~~~il~iGrl~--~~Kg~d~ll~a~~~l~~~~~~lvi-vG~g~-------~~~~---~~l~~l~~~~~~~i~~~~~~~~~ 469 (612)
..+++..|.+. +.+-.+.+..+++.... +|++ +.+.. .... ...+.+.++.+++.... .|-..
T Consensus 262 sVvyvsfGS~~~l~~~q~~ela~gL~~s~~---~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~-~W~PQ 337 (455)
T PLN02152 262 SVIYVSFGTMVELSKKQIEELARALIEGKR---PFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIV-SWCSQ 337 (455)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHcCC---CeEEEEecCcccccccccccccccccchhHHHhccCCeEEE-eeCCH
Confidence 45666678764 35556667777776632 4444 33210 0000 01123333333333333 44332
Q ss_pred HHHHHHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHH
Q 007224 470 LAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 470 ~~~~~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~l 543 (612)
. ++++..++-++-+. || ++++||+.+|+|+|+-...+ ....+.+. +.|+-+... .+ +..+.+++
T Consensus 338 ~--~iL~h~~vg~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~-~~----~~~~~e~l 407 (455)
T PLN02152 338 I--EVLRHRAVGCFVTH---CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVREN-SE----GLVERGEI 407 (455)
T ss_pred H--HHhCCcccceEEee---CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecC-cC----CcCcHHHH
Confidence 2 38888887666555 44 58999999999999975432 33333331 245543100 00 12378999
Q ss_pred HHHHHHHHHh
Q 007224 544 STTVRRALAT 553 (612)
Q Consensus 544 a~~l~~ll~~ 553 (612)
+++|++++.+
T Consensus 408 ~~av~~vm~~ 417 (455)
T PLN02152 408 RRCLEAVMEE 417 (455)
T ss_pred HHHHHHHHhh
Confidence 9999999975
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=84.88 E-value=24 Score=38.80 Aligned_cols=72 Identities=7% Similarity=0.069 Sum_probs=46.9
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++...+..+-+. || ++.+||+.+|+|+|+-...+ ....+.+ -+.|+.+... +. ..-+.+++.++|
T Consensus 330 vL~h~~v~~FvtH---~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~--~~---~~~~~e~i~~av 401 (453)
T PLN02764 330 ILSHPSVGCFVSH---CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVARE--ET---GWFSKESLRDAI 401 (453)
T ss_pred HhcCcccCeEEec---CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccc--cC---CccCHHHHHHHH
Confidence 7887666444444 54 68999999999999986543 3334432 3456643100 00 124789999999
Q ss_pred HHHHHh
Q 007224 548 RRALAT 553 (612)
Q Consensus 548 ~~ll~~ 553 (612)
++++.+
T Consensus 402 ~~vm~~ 407 (453)
T PLN02764 402 NSVMKR 407 (453)
T ss_pred HHHhcC
Confidence 999976
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=84.43 E-value=19 Score=40.03 Aligned_cols=76 Identities=14% Similarity=0.184 Sum_probs=45.0
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cc-cceecCceEEEeccc-cccc--CCCCCCCHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LV-DTVEEGFTGFQMGSF-SVDC--EAVDPVDVAAVS 544 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~-e~v~~g~~G~l~~~~-~~~~--~~v~~~d~~~la 544 (612)
+++...+-.+-+. || ++++||+.+|+|+|+-...+ .. ..++.-+.|+.+... ..+. ..-..-+.+++.
T Consensus 355 iL~H~~v~~FvtH---~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~ 431 (481)
T PLN02554 355 VLAKPAIGGFVTH---CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIE 431 (481)
T ss_pred HhCCcccCccccc---CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHH
Confidence 7755555444344 55 58999999999999986432 22 234444557655210 0000 000123789999
Q ss_pred HHHHHHHH
Q 007224 545 TTVRRALA 552 (612)
Q Consensus 545 ~~l~~ll~ 552 (612)
++|++++.
T Consensus 432 ~av~~vm~ 439 (481)
T PLN02554 432 RGIRCLME 439 (481)
T ss_pred HHHHHHhc
Confidence 99999996
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=84.30 E-value=18 Score=40.17 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=47.4
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccce-ecCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++...+..+-+. || ++.+||+.+|+|+|+-...+ ....+ ..-+.|..+... + ..-+.++++++|
T Consensus 351 iL~h~~vg~FitH---~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~--~----~~~~~~~l~~av 421 (481)
T PLN02992 351 ILAHQAVGGFLTH---CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP--K----EVISRSKIEALV 421 (481)
T ss_pred HhCCcccCeeEec---CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC--C----CcccHHHHHHHH
Confidence 7888887554444 55 58999999999999986443 33344 233456654100 0 124789999999
Q ss_pred HHHHHh
Q 007224 548 RRALAT 553 (612)
Q Consensus 548 ~~ll~~ 553 (612)
.+++.+
T Consensus 422 ~~vm~~ 427 (481)
T PLN02992 422 RKVMVE 427 (481)
T ss_pred HHHhcC
Confidence 999965
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=83.94 E-value=11 Score=39.67 Aligned_cols=110 Identities=15% Similarity=0.097 Sum_probs=63.7
Q ss_pred HHHHhCCCCCCCCcEEEEEcC-cccccCH--HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCC----ceEEE
Q 007224 391 LQAEVGLPVDRNIPVIGFIGR-LEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE----KARGV 463 (612)
Q Consensus 391 l~~~~gl~~~~~~~~il~iGr-l~~~Kg~--d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~----~i~~~ 463 (612)
+.+.+++..+ +..+++..|. ..+.|.+ +.+.+.++.+.+.+++++++|... .++..+++....+. ++...
T Consensus 170 ~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~--e~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T PRK10916 170 TCAAFSLSSE-RPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_pred HHHHcCCCCC-CCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH--hHHHHHHHHHhcccccccceeec
Confidence 4444554211 2234455654 3456654 456777777755678999998654 23344444443321 12222
Q ss_pred -eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 464 -AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 464 -~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+..+-.++..+++.||++|-.-. ..+-=|.+.|+|+|+--
T Consensus 247 ~g~~sL~el~ali~~a~l~I~nDT-----Gp~HlAaA~g~P~valf 287 (348)
T PRK10916 247 AGETQLEQAVILIAACKAIVTNDS-----GLMHVAAALNRPLVALY 287 (348)
T ss_pred cCCCCHHHHHHHHHhCCEEEecCC-----hHHHHHHHhCCCEEEEE
Confidence 23355566679999999995432 22333788999999764
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=83.17 E-value=5.5 Score=40.40 Aligned_cols=101 Identities=15% Similarity=0.130 Sum_probs=58.8
Q ss_pred CCCcEEEEEcCcccc-------cCHHHHHHHHHhccc--CCcEEEEEeCCch---hHHHHHHHHHHHCCCceEEEeccCh
Q 007224 401 RNIPVIGFIGRLEEQ-------KGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 401 ~~~~~il~iGrl~~~-------Kg~d~ll~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~~~~~i~~~~~~~~ 468 (612)
.+++.|++....... .....+++.+..+.+ |+.+++|-=.... .....+.++.. ... +.... ..
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~-~~~-~~~~~--~~ 190 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN-LPN-VVIID--DD 190 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc-CCC-eEEEC--CC
Confidence 456788888777654 234455555555544 5788877544311 11122332222 121 22221 22
Q ss_pred HHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC
Q 007224 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 510 (612)
Q Consensus 469 ~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g 510 (612)
--..+++..||.++.- .+.+.+||+.+|+|||+....
T Consensus 191 ~~~~~Ll~~s~~Vvti-----nStvGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 191 VNLYELLEQSDAVVTI-----NSTVGLEALLHGKPVIVFGRA 227 (269)
T ss_pred CCHHHHHHhCCEEEEE-----CCHHHHHHHHcCCceEEecCc
Confidence 2345689999998853 467999999999999997543
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=81.80 E-value=1.6 Score=42.11 Aligned_cols=38 Identities=29% Similarity=0.393 Sum_probs=29.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
||||+.+..- =.+.-+..|.++|.+.||+|+|++|...
T Consensus 1 M~ILlTNDDG-------i~a~Gi~aL~~~L~~~g~~V~VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDG-------IDAPGIRALAKALSALGHDVVVVAPDSE 38 (196)
T ss_dssp SEEEEE-SS--------TTSHHHHHHHHHHTTTSSEEEEEEESSS
T ss_pred CeEEEEcCCC-------CCCHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 8999999751 1233578899999888899999999854
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=81.77 E-value=28 Score=38.19 Aligned_cols=72 Identities=8% Similarity=0.045 Sum_probs=47.9
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----ccccee-cCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++.+.+..+-+. || ++.+||+.+|+|+|+-...+ ....+. +-+.|+.+... .+ ..-+.+++.+++
T Consensus 325 vL~h~~v~~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~-~~----~~~~~~~i~~~v 396 (446)
T PLN00414 325 ILSHPSVGCFVNH---CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRE-DS----GWFSKESLRDTV 396 (446)
T ss_pred HhcCCccceEEec---CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccc-cC----CccCHHHHHHHH
Confidence 7888865444344 55 58999999999999986432 334443 34667665210 00 024789999999
Q ss_pred HHHHHh
Q 007224 548 RRALAT 553 (612)
Q Consensus 548 ~~ll~~ 553 (612)
++++.+
T Consensus 397 ~~~m~~ 402 (446)
T PLN00414 397 KSVMDK 402 (446)
T ss_pred HHHhcC
Confidence 999976
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=81.75 E-value=16 Score=40.43 Aligned_cols=74 Identities=14% Similarity=0.142 Sum_probs=45.1
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++...+-.+-+. || ++.+||+.+|+|+|+-..-+ ....+.+. +.|+-++....+- ..-+.+++.++|
T Consensus 350 iL~H~~v~~FvtH---~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~---~~v~~~~v~~~v 423 (480)
T PLN02555 350 VLAHPSVACFVTH---CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAEN---KLITREEVAECL 423 (480)
T ss_pred HhCCCccCeEEec---CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCcccc---CcCcHHHHHHHH
Confidence 6755444333333 44 58999999999999986432 33344444 5677652100000 123678999999
Q ss_pred HHHHHh
Q 007224 548 RRALAT 553 (612)
Q Consensus 548 ~~ll~~ 553 (612)
++++.+
T Consensus 424 ~~vm~~ 429 (480)
T PLN02555 424 LEATVG 429 (480)
T ss_pred HHHhcC
Confidence 999965
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 612 | ||||
| 3vue_A | 536 | Crystal Structure Of Rice Granule Bound Starch Synt | 0.0 | ||
| 1rzu_A | 485 | Crystal Structure Of The Glycogen Synthase From A. | 3e-52 | ||
| 2qzs_A | 485 | Crystal Structure Of Wild-Type E.Coli Gs In Complex | 6e-52 | ||
| 3d1j_A | 477 | Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408 | 8e-52 | ||
| 3cop_A | 485 | Crystal Structure Of E.Coli Gs Mutant E377a In Comp | 3e-51 | ||
| 1rzv_A | 485 | Crystal Structure Of The Glycogen Synthase From Agr | 1e-48 | ||
| 3l01_A | 428 | Crystal Structure Of Monomeric Glycogen Synthase Fr | 2e-11 | ||
| 2bis_A | 440 | Structure Of Glycogen Synthase From Pyrococcus Abys | 2e-11 | ||
| 3fro_A | 439 | Crystal Structure Of Pyrococcus Abyssi Glycogen Syn | 3e-11 | ||
| 2bfw_A | 200 | Structure Of The C Domain Of Glycogen Synthase From | 1e-10 | ||
| 3c4q_A | 426 | Structure Of The Retaining Glycosyltransferase Msha | 8e-06 | ||
| 3c48_A | 438 | Structure Of The Retaining Glycosyltransferase Msha | 1e-05 | ||
| 3oka_A | 381 | Crystal Structure Of Corynebacterium Glutamicum Pim | 8e-05 | ||
| 3okc_A | 394 | Crystal Structure Of Corynebacterium Glutamicum Pim | 8e-05 |
| >pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536 | Back alignment and structure |
|
| >pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp Length = 485 | Back alignment and structure |
|
| >pdb|2QZS|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) Length = 485 | Back alignment and structure |
|
| >pdb|3D1J|A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408s) Length = 477 | Back alignment and structure |
|
| >pdb|3COP|A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso Length = 485 | Back alignment and structure |
|
| >pdb|1RZV|A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) Length = 485 | Back alignment and structure |
|
| >pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 | Back alignment and structure |
|
| >pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 | Back alignment and structure |
|
| >pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 | Back alignment and structure |
|
| >pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi Length = 200 | Back alignment and structure |
|
| >pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426 | Back alignment and structure |
|
| >pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438 | Back alignment and structure |
|
| >pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381 | Back alignment and structure |
|
| >pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485 | Back alignment and structure |
|---|
Score = 609 bits (1574), Expect = 0.0
Identities = 152/524 (29%), Positives = 241/524 (45%), Gaps = 57/524 (10%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW-DTDVVIEL 143
+ +L V +E+ P KTGGL DV+G LP A A+G + P + + D VV
Sbjct: 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRR 60
Query: 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSL 203
+ H GV +D P + Y Y DN LRF+L
Sbjct: 61 DTFA--GHITLLFGHYNGVGIYLIDAPHLYDR------PGSPYHDTNLFAYTDNVLRFAL 112
Query: 204 LCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVV 263
L E L+ P+ V A+DWH L P YL +P AK V
Sbjct: 113 LGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSV 157
Query: 264 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323
F +HN+AYQG F + LP F + ++ + I+++KAG+ +D +
Sbjct: 158 FTVHNLAYQGMFYAHHMNDIQLPWSF-FNIHGLEFNGQ------ISFLKAGLYYADHITA 210
Query: 324 VSPHYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379
VSP YA+E+ + ++ ++ R+ + G++NG+D + W+P TD + +Y T
Sbjct: 211 VSPTYAREITEPQ-FAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDT 269
Query: 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLG 439
++ K K LQ +GL VD +P+ + RL QKG D++ A+P +++ Q+ +LG
Sbjct: 270 -LEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLG 328
Query: 440 TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 499
G +++ YP + ++ +H I+ GAD IL+PSRFEPCGL QL+ ++
Sbjct: 329 AGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLK 388
Query: 500 YGTVPIVASTGGLVDTVEEGF---------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550
YGT+P+V TGGL DTV + +GF + + ++ +RRA
Sbjct: 389 YGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIRRA 438
Query: 551 LATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSE 593
+ +L + + MA D SW+ AK + E L++
Sbjct: 439 FVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLEHHH 482
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485 | Back alignment and structure |
|---|
Score = 609 bits (1573), Expect = 0.0
Identities = 165/510 (32%), Positives = 244/510 (47%), Gaps = 52/510 (10%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
+N+L V +E+ P KTGGL DV+G LP AL A+G R T+ P Y K A V
Sbjct: 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEF 60
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLL 204
EK +D + +D P + + Y +TG+DY DN RF+ L
Sbjct: 61 TDLLGEKADLLEVQHERLDLLILDAPAYYER------SGGPYLGQTGKDYPDNWKRFAAL 114
Query: 205 CQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 264
AA + + D+V A+DW ++ P Y++ +
Sbjct: 115 SLAAARIGAGVLPG--------WRPDMVH-AHDWQAAMTPVYMRYAE-----TPEIPSLL 160
Query: 265 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324
IHNIA+QG+F F L LPA + I+ YN ++++K G+ + + TV
Sbjct: 161 TIHNIAFQGQFGANIFSKLALPAHA-FGMEGIEYYND------VSFLKGGLQTATALSTV 213
Query: 325 SPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 382
SP YA+E+++ E G+ L+ +I R + GIVNG+D WNP TD I Y A+ +
Sbjct: 214 SPSYAEEILTAE-FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAAN-LK 271
Query: 383 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK 442
+ L K+A+ + D P+ I RL QKG D++A A+ + +++VLG G
Sbjct: 272 NRALNKKAVAEHFRIDDD-GSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD 330
Query: 443 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 502
+E L + + +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG
Sbjct: 331 VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC 390
Query: 503 VPIVASTGGLVDTVE---------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553
+P+VA TGGL DTV + TG Q PV + + +RR +
Sbjct: 391 IPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVRY 440
Query: 554 YGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 582
Y L +M K GM D+SW+ A +
Sbjct: 441 YHDPKLWTQMQKLGMKSDVSWEKSAGLYAA 470
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439 | Back alignment and structure |
|---|
Score = 449 bits (1157), Expect = e-154
Identities = 103/504 (20%), Positives = 178/504 (35%), Gaps = 87/504 (17%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
+ +L +G E P K GGL + L + ALA+ GH V+ P + +++ + +++
Sbjct: 3 MKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE----IGKIR 57
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLL 204
V + +V+ + + + + +YG + +
Sbjct: 58 VFGEEVQVKVSYEERGNLRIYRIGGGLL--------DSEDVYG----PGWDGLIRKAVTF 105
Query: 205 CQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 264
+A++ L DVV +DWHT +K +K VF
Sbjct: 106 GRASVLLLNDLLREEPLP-------DVV-HFHDWHTVFAGALIKKYFKIP-------AVF 150
Query: 265 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324
IH + A F L + Y I+ G +D+V TV
Sbjct: 151 TIHRLNKSKLPA-FYFHEAGLSE--------LAPYPD------IDPEHTGGYIADIVTTV 195
Query: 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384
S Y + G + + I + NG+D WN ++
Sbjct: 196 SRGYLIDE-----WGFFRN---FEGKITYVFNGIDCSFWNESYLT------------GSR 235
Query: 385 PLLKEALQAEVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK----ENVQIIVLG 439
K++L ++ G+ FIGR QKG D+L AI + ++ I++G
Sbjct: 236 DERKKSLLSKFGMDEG---VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIG 292
Query: 440 TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 499
G +E LE + + + DF++IPS FEP GL+ L AM
Sbjct: 293 KGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMC 352
Query: 500 YGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559
G +PI ++ GGL D + TG D ++ + +AL +
Sbjct: 353 LGAIPIASAVGGLRDIITNE-TGI---LV-------KAGDPGELANAILKALELSRSDLS 401
Query: 560 A-EMMKNGMAQDLSWKGPAKKWEE 582
A SW+ A+++ +
Sbjct: 402 KFRENCKKRAMSFSWEKSAERYVK 425
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 | Back alignment and structure |
|---|
Score = 277 bits (710), Expect = 2e-90
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 32/226 (14%)
Query: 353 GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL 412
G NG+D WN ++ K++L ++ G+ FIGR
Sbjct: 1 GSHNGIDCSFWNESYLT------------GSRDERKKSLLSKFGMDEG---VTFMFIGRF 45
Query: 413 -EEQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467
QKG D+L AI + ++ I++G G +E LE + +
Sbjct: 46 DRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLS 105
Query: 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 527
+ DF++IPS FEP GL+ L AM G +PI ++ GGL D + TG
Sbjct: 106 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGIL--- 161
Query: 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 573
V D ++ + +AL L++ +N + +S+
Sbjct: 162 -------VKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMSF 199
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-23
Identities = 51/295 (17%), Positives = 99/295 (33%), Gaps = 62/295 (21%)
Query: 299 YNKPVRGRKINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 357
+N + + GI +SD+V VS E EL + I+ + N
Sbjct: 137 ITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETH-------ELVKPNKD--IQTVYNF 187
Query: 358 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 417
+D + + L+ E G+ ++ I + K
Sbjct: 188 IDERVYFKRD--------------------MTQLKKEYGISESE--KILIHISNFRKVKR 225
Query: 418 SDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA---KF--NIPLA 471
+ A + E + +++++G G P + QL K + F
Sbjct: 226 VQDVVQAFAKIVTEVDAKLLLVGDG--PEFCTILQLV-----KNLHIEDRVLFLGKQDNV 278
Query: 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSV 530
++A +D +L+ S E GL+ L AM G VP + + GG+ + ++ G TG+
Sbjct: 279 AELLAMSDLMLLLSEKESFGLVLLEAMACG-VPCIGTRVGGIPEVIQHGDTGY------- 330
Query: 531 DCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMA---QDLSWKGPAKKWEE 582
+ D V+ + L + M + + + ++E
Sbjct: 331 ---LCEVGDTTGVADQAIQLLKD--EELHRNMGERARESVYEQFRSEKIVSQYET 380
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-23
Identities = 37/279 (13%), Positives = 88/279 (31%), Gaps = 51/279 (18%)
Query: 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 376
+S ++ ++ + + E + + G+
Sbjct: 136 KSTKLMMLTDKQIADFQ--KHYQTEPERFQI------LPPGIYPDRKYS----------- 176
Query: 377 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII 436
+ P +E + + G+ + ++ +G +KG D A+ +
Sbjct: 177 -----EQIPNSREIYRQKNGIKEQQ--NLLLQVGSDFGRKGVDRSIEALASLPESLRHNT 229
Query: 437 VLGTGKKPMEKQLEQLEILYPEKARGVA---KFNIPLAHM--IIAGADFILIPSRFEPCG 491
+L + ++ E L + GV F + ++A AD +L P+ E G
Sbjct: 230 LLFVVGQDKPRKFEALA-----EKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAG 284
Query: 492 LIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550
++ L A+ G P++ + G + + G + +P ++ +R+A
Sbjct: 285 IVLLEAITAGL-PVLTTAVCGYAHYIADANCGTVI---------AEPFSQEQLNEVLRKA 334
Query: 551 LATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 587
L + +N A +K + +
Sbjct: 335 LTQ--SPLRMAWAENARHYADTQDLYSLPEKAADIITGG 371
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 4e-22
Identities = 61/279 (21%), Positives = 104/279 (37%), Gaps = 61/279 (21%)
Query: 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 376
+D++ + Q+L+ + D I + G DV+ ++P D+
Sbjct: 184 NADVLAVNTQEEMQDLM--HHYDADPDRISV------VSPGADVELYSPGNDR------- 228
Query: 377 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE----N 432
E + E+G+P+ V+ F+GRL+ KG +L A+ N
Sbjct: 229 ----------ATERSRRELGIPLHT--KVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRN 276
Query: 433 VQIIVLG--TGKKPMEKQLEQLEILYPEKARGVAK---FNIPLAH----MIIAGADFILI 483
+++I+ G +G + + GV K F P + AD + +
Sbjct: 277 LRVIICGGPSGPNATPDTYRHMA-----EELGVEKRIRFLDPRPPSELVAVYRAADIVAV 331
Query: 484 PSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542
PS E GL+ + A GT P++A+ GGL V EG TG VD A
Sbjct: 332 PSFNESFGLVAMEAQASGT-PVIAARVGGLPIAVAEGETGL----------LVDGHSPHA 380
Query: 543 VSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKK 579
+ + L + M ++ A+ SW A +
Sbjct: 381 WADALATLLDD--DETRIRMGEDAVEHARTFSWAATAAQ 417
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 3e-20
Identities = 73/507 (14%), Positives = 147/507 (28%), Gaps = 114/507 (22%)
Query: 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHK 159
GG + + ALA G +V I R + KD + E+ + KVR
Sbjct: 32 FGGQLVYVKEVSLALAEMGVQV-DIITR--RIKDENWPEFSGEIDYYQETNKVR------ 82
Query: 160 RGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNS 219
+ R+ FL K +L + L + +
Sbjct: 83 --IVRIPFGGDKFLPK---------------------EEL-WPYLHEYVNKIINFYREEG 118
Query: 220 NKYFSGPYGEDVVFVANDWHTSLIPCYLKTMY-KPKGMYKSAKVVFCIHNIAYQGRFAFE 278
VV + L LK + P F H++ Q
Sbjct: 119 KFP-------QVV-TTHYGDGGLAGVLLKNIKGLP--------FTFTGHSLGAQKM---- 158
Query: 279 DFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK 338
L + + + + R I + + +D ++ + S +
Sbjct: 159 ----EKLNVNTSNFKEMDERFKFHRR---IIAERLTMSYADKIIVSTSQERFGQYSHDLY 211
Query: 339 GVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398
++ I G++ + ++ K + + L+ ++G
Sbjct: 212 RGAVNVEDDDK-FSVIPPGVNTRVFDGEYGD------------KIKAKITKYLERDLGSE 258
Query: 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQ-IIVLGTGKKPMEKQLEQLEIL 455
+P I RL+++K L A + + ++ L + P E +
Sbjct: 259 -RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEE 317
Query: 456 YPE--------KARGVA-KFNIPLAHM----------IIAGADFILIPSRFEPCGLIQLH 496
K ++ + + + + S +EP GL +
Sbjct: 318 KEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVE 377
Query: 497 AMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555
AM G P V + GG + ++ G G VDP D ++ + +A +
Sbjct: 378 AMASGL-PAVVTRNGGPAEILDGGKYGV----------LVDPEDPEDIARGLLKAFES-- 424
Query: 556 TQALAEMMKNGM---AQDLSWKGPAKK 579
+ + + G + +W+ A+
Sbjct: 425 EETWSAYQEKGKQRVEERYTWQETARG 451
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 4e-20
Identities = 62/286 (21%), Positives = 104/286 (36%), Gaps = 71/286 (24%)
Query: 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 376
E D++ +S + + + +G+DV+ + P
Sbjct: 140 EVDVLTYISQYTLRRFK---SAFGSHPTFEH------LPSGVDVKRFTP----------- 179
Query: 377 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQ 434
A P K A + ++G PVI RL +KG D L A+P I + Q
Sbjct: 180 ------ATPEDKSATRKKLGFTDTT--PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQ 231
Query: 435 IIVLGTGKKPMEKQLEQLEILYPEKARGVAK-----FNIPLAHM--IIAGADFILIPSR- 486
++++G+G E L +L A V++ + M +A AD +P+R
Sbjct: 232 LLIVGSG--RYESTLRRL-------ATDVSQNVKFLGRLEYQDMINTLAAADIFAMPART 282
Query: 487 ------FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 539
E G++ L A G VP++A +GG +TV TG V+ D
Sbjct: 283 RGGGLDVEGLGIVYLEAQACG-VPVIAGTSGGAPETVTPA-TGL----------VVEGSD 330
Query: 540 VAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 582
V +S + L A M G + + SW+ ++
Sbjct: 331 VDKLSELLIELLDD--PIRRAAMGAAGRAHVEAEWSWEIMGERLTN 374
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 5e-18
Identities = 35/232 (15%), Positives = 72/232 (31%), Gaps = 52/232 (22%)
Query: 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLT 367
+++ + + D + P Y Q + + + +D
Sbjct: 166 WEFLRRFVEKYDRYIFHLPEYVQPELDRNKAVI-------------MPPSIDPLSEKN-- 210
Query: 368 DKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPH 427
++ K + + ++ P+I + R + KG +
Sbjct: 211 -------------VELKQTEILRILERFDVDPEK--PIITQVSRFDPWKGIFDVIEIYRK 255
Query: 428 FIKE--NVQIIVLGTG-------KKPMEKQLEQLEILYPEKARGVAK------FNIPLAH 472
++ VQ++++G EK L ++ + V + +
Sbjct: 256 VKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIG-----EDYDVKVLTNLIGVHAREVN 310
Query: 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGF 523
+D IL S E GL AM G P++ GG+ + +G TGF
Sbjct: 311 AFQRASDVILQMSIREGFGLTVTEAMWKG-KPVIGRAVGGIKFQIVDGETGF 361
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 86.2 bits (213), Expect = 1e-17
Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 38/257 (14%)
Query: 351 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIG 410
+ G D+ + P T++ + S + + + + + D+ P++ +
Sbjct: 521 FNIVSPGADMSIYFPYTEEKRRLTKFHSEI-EELLYSDVENKEHLCVLKDKKKPILFTMA 579
Query: 411 RLEEQKGSDILAAAIPHFIK--ENVQIIVLG---------TGKKPMEKQLEQLEILYPEK 459
RL+ K L + E ++V+G +K K++ L Y K
Sbjct: 580 RLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEY--K 637
Query: 460 ARGVAKF---------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 510
G ++ N L I + P+ +E GL + AM G G
Sbjct: 638 LNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG 697
Query: 511 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGM- 567
G + + G +GF +DP + T+ E+ K G+
Sbjct: 698 GPAEIIVHGKSGF----------HIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQ 747
Query: 568 --AQDLSWKGPAKKWEE 582
+ +W+ +++
Sbjct: 748 RIEEKYTWQIYSQRLLT 764
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 1e-14
Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 40/190 (21%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKAR- 461
I +GR +K +L A+ + ++ +++ G G P EK+++ L A+
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKG--PDEKKIKLL-------AQK 53
Query: 462 -GVAKF-------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST--GG 511
GV + I+ + + E + L A+ G VP++A++
Sbjct: 54 LGVKAEFGFVNSNELLE---ILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSA 110
Query: 512 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQ 569
+ + +P + +S + L M A
Sbjct: 111 TRQFALDERSL------------FEPNNAKDLSAKIDWWLEN--KLERERMQNEYAKSAL 156
Query: 570 DLSWKGPAKK 579
+ + + +
Sbjct: 157 NYTLENSVIQ 166
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 4e-14
Identities = 49/286 (17%), Positives = 82/286 (28%), Gaps = 91/286 (31%)
Query: 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDK 369
++ + + VS + + I NG+DV +
Sbjct: 153 ILRPYHEKIIGRIAVSDLARRWQMEALGSDAVE-----------IPNGVDVASFAD---- 197
Query: 370 YIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHF 428
A + R + F+GR E +KG +L AA+P
Sbjct: 198 -----------------------APLLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKL 234
Query: 429 IKE--NVQIIVLGTGKKPMEKQLEQLEIL-----------YPEKARGVAKFNIPLAHMII 475
+ +V+I+++G G ++ EQ L KA +
Sbjct: 235 VARFPDVEILIVGRG--DEDELREQAGDLAGHLRFLGQVDDATKAS------------AM 280
Query: 476 AGADFILIPSR-FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCE 533
AD P E G++ + AM GT +VAS + +G G
Sbjct: 281 RSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDAFRRVLADGDAGR---------- 329
Query: 534 AVDPVDVAAVSTTVRRAL------ATYGTQALAEMMKNGMAQDLSW 573
V D ++ + L A Y +A W
Sbjct: 330 LVPVDDADGMAAALIGILEDDQLRAGYVARASER------VHRYDW 369
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 74.1 bits (181), Expect = 6e-14
Identities = 31/251 (12%), Positives = 70/251 (27%), Gaps = 47/251 (18%)
Query: 184 KIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 243
I P + ++ + L +V ++W +
Sbjct: 147 GIPSPENDFET-NDAILLGYTVAWFLGE----------VAHLDSQHAIVAHFHEWLAGVA 195
Query: 244 PCYLKTMYKPKGMYKSAKVVFCIH------NIAYQGRFAFEDFGLLNLPAQFKSSFDFID 297
+ +F H + G F F + L + D
Sbjct: 196 LPLCRKRRID------VVTIFTTHATLLGRYLCASGSFDFYN----CLES-----VDVDH 240
Query: 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 357
+ + +A +D+ TVS A E ++++++ + NG
Sbjct: 241 EAGRFGIYHRYCIERAAAHSADVFTTVSQITAF----------EAEHLLKRKPDGILPNG 290
Query: 358 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQK 416
++V ++ + + D ++ +D + GR E + K
Sbjct: 291 LNVIKFQAFHEFQNLHALKKEKINDF---VRGHFHGCFDFDLDNTLYFF-IAGRYEYKNK 346
Query: 417 GSDILAAAIPH 427
G+D+ A+
Sbjct: 347 GADMFIEALAR 357
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 2e-07
Identities = 44/318 (13%), Positives = 89/318 (27%), Gaps = 30/318 (9%)
Query: 287 AQFKSSFDFI--DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 344
F FDF + + GR K G DM + L K +
Sbjct: 319 GHFHGCFDFDLDNTLYFFIAGRYEYKNK-GA---DMFIEALARLNYRLKVSGSKKTVVAF 374
Query: 345 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL---LKEALQAEVG-LPVD 400
I+ ++ + ++ +T + + ++ LP D
Sbjct: 375 IVMPAKNNSF--TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTD 432
Query: 401 RNI------PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEI 454
V+ L ++ L + H + ++ ++L ++ +
Sbjct: 433 LGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRV 492
Query: 455 ---LYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 511
+PE + G + PS +EP G G I + G
Sbjct: 493 KMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552
Query: 512 LVDTVEEGFTGFQM---GSFSVDCEAVDPVDVA-AVSTTVRRALATYGTQALAEMMKNG- 566
+E+ Q G + VD P + + + + Q +N
Sbjct: 553 FGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQ--RINQRNAT 610
Query: 567 --MAQDLSWKGPAKKWEE 582
++ L WK ++ +
Sbjct: 611 EALSDLLDWKRMGLEYVK 628
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 8e-11
Identities = 19/224 (8%), Positives = 68/224 (30%), Gaps = 25/224 (11%)
Query: 366 LTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAA 424
L + Y+ + +P + L+ + + +I GR ++ ++ A
Sbjct: 205 LKQYFNNKGYNFTDEYFFQPKINTTLKNYINDKRQKE-KIILVYGRPSVKRNAFTLIVEA 263
Query: 425 IPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM--IIAGAD 479
+ F++ + + ++ G+K + L + + + L ++ +
Sbjct: 264 LKIFVQKYDRSNEWKIISVGEKHKDIAL-------GKGIHLNSLGKLTLEDYADLLKRSS 316
Query: 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 539
+ L +G ++ + D ++ ++
Sbjct: 317 IGISLMISPHPSYPPLEMAHFGL-RVITNKYENKDLSNWHSNIVS----------LEQLN 365
Query: 540 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 583
++ T+ ++ + + + + M ++ +E
Sbjct: 366 PENIAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFSFIKEI 409
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 2e-10
Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 17/141 (12%)
Query: 395 VGLPVDRNI-------PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEK 447
PV+ + + R+ +K ++ ++ ++ ++G
Sbjct: 8 HSHPVETSKFKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWF--SKGD 63
Query: 448 QLEQLEILYPEKARGVAKF--NIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTV 503
E+ + A KF ++ +I + +L ++ E GL + AM G
Sbjct: 64 HAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK- 122
Query: 504 PIVAS-TGGLVDTVEEGFTGF 523
P++A GG +TV TG+
Sbjct: 123 PVIAVNEGGFKETVINEKTGY 143
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 59.8 bits (144), Expect = 1e-09
Identities = 56/397 (14%), Positives = 104/397 (26%), Gaps = 54/397 (13%)
Query: 236 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 295
++ I + ++++ + ++ F GL K D
Sbjct: 31 HEVIVFGIHAFGRSVHANIEEFD----AQTAEHVRGLNEQGFYYSGLSEFIDVHK--PDI 84
Query: 296 IDGYNKP-VRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 354
+ YN P V G + M + +VL V +N+ +
Sbjct: 85 VMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR----------ENLWWIFSHPKV 134
Query: 355 VNGMDVQEWNPLTDKYIGVKYDASTVMDAK-PLLKEALQAEVGLPVDRNIPVIGFIGRLE 413
V M + + G K + V + VGL + + + R
Sbjct: 135 VGVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNT 194
Query: 414 EQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471
+K DI A FI + + ++ L + L + + + F
Sbjct: 195 ARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNK 254
Query: 472 HMIIAG-------------ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 518
MI D I+ S E GL G I+++ GG D
Sbjct: 255 IMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSG 314
Query: 519 GF----------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM-KNG- 566
+ +D D+ A + + + K
Sbjct: 315 DCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVE-------AFTFFKDEKNRKEYGKRVQ 367
Query: 567 --MAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEI 601
+ +W + + +L S EE
Sbjct: 368 DFVKTKPTWDDISSDIIDFFNSLLRVESRETPGNEEH 404
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 18/170 (10%)
Query: 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 463
+ F+GR+ KG+ AA ++++ G + +++ Y +
Sbjct: 163 DFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPA--WEPEYFDEITRRYGSTVEPI 217
Query: 464 AKFNIPLAHMIIAGADFILIPSRF----------EPCGLIQLHAMRYGTVPIVAS-TGGL 512
+ ++A A +L S+ EP + A GT P+V + G L
Sbjct: 218 GEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGNGCL 276
Query: 513 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR-ALATYGTQALAE 561
+ V G+ EA + S VRR A+ +G +AE
Sbjct: 277 AEIVPSVGEVVGYGTDFAPDEARRTLAGLPASDEVRRAAVRLWGHVTIAE 326
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 2e-08
Identities = 52/368 (14%), Positives = 107/368 (29%), Gaps = 95/368 (25%)
Query: 41 RSLNIIDDLQ----VKTMASK---LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTE 93
L ++ ++Q L T+R + + + + ++ E
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRF--KQVTDFLSAATTTHISLDHHSMTLTPDE 302
Query: 94 V----APW--SKTGGL-GDVLGGLPPALAANGHRVMTIAPRYDQYK--DAWDTDVVIELK 144
V + + L +VL P L+ + +D +K + +IE
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDH---PWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRF 201
+ + +E + R VF P L ++W D +
Sbjct: 363 L-NVLEPAEYRKMFDRLS--VFPPSAHIPTILLSLIWFD-----------VIKSDVMVVV 408
Query: 202 SLLCQAALEAPRILNLNSNKYFSGPYGEDVVF---VANDW--HTSLIPCY-LKTMYKPKG 255
+ L + +L + + + + N++ H S++ Y + +
Sbjct: 409 NKLHKYSL-----VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD 463
Query: 256 M-------YKSAKVVFCIHNIAY-------QGRFA-----FEDF---------------- 280
+ Y F H I + R F DF
Sbjct: 464 LIPPYLDQY------FYSH-IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA 516
Query: 281 --GLLNLPAQFKSSFDFI-DGYNKPVRGRKINWMKAGILESDMVLTVSPH--YAQELVSG 335
+LN Q K +I D N P R +N + + + + L S + + +
Sbjct: 517 SGSILNTLQQLKFYKPYICD--NDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574
Query: 336 EDKGVELD 343
ED+ + +
Sbjct: 575 EDEAIFEE 582
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 612 | |||
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.97 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.97 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.96 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 99.96 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.96 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.95 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.95 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.95 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.94 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.93 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 99.93 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.92 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.91 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.86 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.84 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.81 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.8 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.8 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.78 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.69 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.65 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.65 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.59 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.56 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.54 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.46 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.45 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.44 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.25 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.11 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 99.06 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.02 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 98.91 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.85 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.75 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.69 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.02 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.59 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.1 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 95.99 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 95.36 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 95.29 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 94.88 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 93.96 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 93.46 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 93.31 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 91.32 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 89.32 |
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-83 Score=708.32 Aligned_cols=529 Identities=71% Similarity=1.195 Sum_probs=458.9
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
..||||||++|++|+.|+||+++++++|+++|+++||+|+||+|.|+++++.++......+.++++...+++++...+|+
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 87 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGV 87 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETTE
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECCc
Confidence 47999999999999999999999999999999999999999999999999888888888899999999999999999999
Q ss_pred eEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccch
Q 007224 163 DRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~ 242 (612)
+++++++|.|+.+ .|+.++..+|++..|.+|.|+..||.+||++++++++.++....+++.+.+++|+|+|+|||++++
T Consensus 88 ~~y~id~~~~~~r-~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~l 166 (536)
T 3vue_A 88 DRVFIDHPSFLEK-VWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGP 166 (536)
T ss_dssp EEEEEECTTTTCC-------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGST
T ss_pred eEEEecChhhhcc-ccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHHH
Confidence 9999999999999 888888999999999999999999999999999999999888888888888888899999999999
Q ss_pred HHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEE
Q 007224 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 322 (612)
+|.+++..++..+.+.++|+|+|+||+.+||.|+...+..++++.......++...+..+.....+++++.++..||+|+
T Consensus 167 ~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v~ 246 (536)
T 3vue_A 167 LASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVL 246 (536)
T ss_dssp HHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEEE
T ss_pred HHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEEE
Confidence 99999999988888899999999999999999999999888988887766666666776667778999999999999999
Q ss_pred ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCC
Q 007224 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~ 402 (612)
|||+.+++++.....+|..++...+..++.+|+||+|.+.|+|.+++++..+|+..+....|..+|..+++++|++.+++
T Consensus 247 tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~ 326 (536)
T 3vue_A 247 TVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRK 326 (536)
T ss_dssp ESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTT
T ss_pred EcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCC
Confidence 99999999998766677777766777899999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
.|+|+|+||++++||++.|++|++++.+++.+|+|+|.|+...+..++.+...++.++...+.++.++.+.+|+.||++|
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v 406 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLA 406 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSEEE
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhheee
Confidence 99999999999999999999999999888999999999998888899999999998899999999999999999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 562 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~ 562 (612)
+||++|+||++++|||+||+|||+|++||+.|+|.++.|||+++....++.+|++.|+++|+++|.++++.++.+.++++
T Consensus 407 ~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~ 486 (536)
T 3vue_A 407 VPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEM 486 (536)
T ss_dssp ECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred cccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999888999999999999999999999987666788999
Q ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHcCCCCCCCCCCcccchhhhcCCC
Q 007224 563 MKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 612 (612)
Q Consensus 563 ~~~~~~~~~sw~~~a~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (612)
++++++++|||++++++|+++|++|...++.|+.++++++|+++|+++||
T Consensus 487 ~~~am~~~fSW~~~A~~y~~ly~~L~~~~~~p~~~~~~~aP~~~~~~~~p 536 (536)
T 3vue_A 487 VRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 536 (536)
T ss_dssp HHHHHHSCCSSHHHHHHHHHHHHTTCC-----------------------
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCCCCCCC
Confidence 99999999999999999999999998888899999999999999999998
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-50 Score=439.14 Aligned_cols=462 Identities=32% Similarity=0.577 Sum_probs=351.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEE-EEE-eCCeeeEEEEEEeeecCc
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVI-ELK-VGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~gv 162 (612)
|||++|+.+++|....||++.++..|+++|+++||+|+|+++.++.....+...... ... .++ ...+.....+|+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gv 77 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAG---HITLLFGHYNGV 77 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTC---CEEEEEEEETTE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCC---cEEEEEEEECCc
Confidence 899999999888656899999999999999999999999999754322211111000 000 000 122233345799
Q ss_pred eEEEEeChhhhhhhhcCCCCCc-ccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccc
Q 007224 163 DRVFVDHPWFLAKVVWGKTQSK-IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 241 (612)
Q Consensus 163 ~~~~l~~~~~~~~~~w~~~~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~ 241 (612)
++++++.+.++.+ .. +|....+.+|.++..++..++..+.++++.+.. ..+|| |||+|+|.++
T Consensus 78 ~v~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~D-ivh~~~~~~~ 141 (485)
T 2qzs_A 78 GIYLIDAPHLYDR-------PGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDP--------FWRPD-VVHAHDWHAG 141 (485)
T ss_dssp EEEEEECHHHHCC-------SSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSST--------TCCCS-EEEEETGGGT
T ss_pred EEEEEeChhhccC-------CCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhcc--------CCCCC-EEEeeccchh
Confidence 9999887655443 22 565545556788888887787777777665421 13799 9999999988
Q ss_pred hHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEE
Q 007224 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 321 (612)
+++.+++... .++|+|+++|+..+++.++...+..++++..+... ... .......+++..+..+|.+
T Consensus 142 ~~~~~~~~~~------~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~ad~v 208 (485)
T 2qzs_A 142 LAPAYLAARG------RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNI----HGL---EFNGQISFLKAGLYYADHI 208 (485)
T ss_dssp THHHHHHHTT------CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCST----TTT---EETTEEEHHHHHHHHCSEE
T ss_pred HHHHHHhhcc------CCCCEEEEecCccccCCCCHHHHHhcCCCchhccc----ccc---cccccccHHHHHHHhcCeE
Confidence 8877766311 58999999999876555443333333433322110 000 0011335778889999999
Q ss_pred EecCHHHHHHHHccccCCccchhhh--hc--cCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCC
Q 007224 322 LTVSPHYAQELVSGEDKGVELDNII--RK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~g~~~~~~~--~~--~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl 397 (612)
+++|+..++.+.+. .+|...+.++ +. .++.+||||+|.+.|.|..+..+..+|+.+++ ..+...+..+++++|+
T Consensus 209 i~~S~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~ 286 (485)
T 2qzs_A 209 TAVSPTYAREITEP-QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTL-EDKAENKRQLQIAMGL 286 (485)
T ss_dssp EESSHHHHHHTTSH-HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCG-GGGHHHHHHHHHHHTC
T ss_pred EecCHHHHHHHhcc-ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccch-hHHHHhHHHHHHHcCC
Confidence 99999999988741 1233221111 11 48999999999999998877777778887775 5667778899999999
Q ss_pred CCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007224 398 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 398 ~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ 477 (612)
+.+++.++|+|+||+.++||++.+++|+.++.+++++|+|+|+|+..+.+.++++..++++++..+.+++.+.+..+|+.
T Consensus 287 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ 366 (485)
T 2qzs_A 287 KVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGG 366 (485)
T ss_dssp CCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHH
T ss_pred CCCCCCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHh
Confidence 86556789999999999999999999999997779999999999866888999999988777876667787777889999
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---------ceEEEecccccccCCCCCCCHHHHHHHHH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~l~~~~~~~~~~v~~~d~~~la~~l~ 548 (612)
||++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ ++.|+++++++|.
T Consensus 367 adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~ 436 (485)
T 2qzs_A 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIR 436 (485)
T ss_dssp CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------CSSSHHHHHHHHH
T ss_pred CCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEE----------CCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 899988 9999999999999
Q ss_pred HHHHhh-CHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 549 RALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 549 ~ll~~~-~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
++++.+ +++.+.+|++++..+.|||+.++++|+++|+++...
T Consensus 437 ~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 437 RAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHcCCHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHhhhh
Confidence 999421 277888999998889999999999999999998643
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-50 Score=438.73 Aligned_cols=464 Identities=35% Similarity=0.571 Sum_probs=353.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCc-cEEEEEEeCCeeeEEEEEEeeecCce
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
|||++|+.+++|....||++.++..|+++|+++||+|+|+++.++.....+.. ....+..+... ...+..+...+|++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gv~ 79 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLG-EKADLLEVQHERLD 79 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSS-CCEEEEEEEETTEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecC-CeEEEEEEEecCce
Confidence 89999999998865589999999999999999999999999975432221111 00001100000 01233334458999
Q ss_pred EEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchH
Q 007224 164 RVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~ 243 (612)
++.++.+.++.+ . ..+|+...+.+|.++..++..++..+.++++.+- ..++|| |||+|+|.++++
T Consensus 80 v~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~D-iIh~~~~~~~~~ 144 (485)
T 1rzu_A 80 LLILDAPAYYER-----S-GGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVL--------PGWRPD-MVHAHDWQAAMT 144 (485)
T ss_dssp EEEEECHHHHCS-----S-SCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCS--------SSCCCS-EEEEEHHHHTTH
T ss_pred EEEEeChHHhCC-----C-ccccCCcccccccchHHHHHHHHHHHHHHHHHhc--------cCCCCC-EEEecccchhHH
Confidence 999887655433 0 1256554566688888888888877777766540 123799 999999888888
Q ss_pred HHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEe
Q 007224 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 323 (612)
+.+++... ..++|+|+++|+..+++.++...+..++++...... +.. .......+++..+..+|.+++
T Consensus 145 ~~~~~~~~-----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~ad~vi~ 212 (485)
T 1rzu_A 145 PVYMRYAE-----TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGM----EGI---EYYNDVSFLKGGLQTATALST 212 (485)
T ss_dssp HHHHHHSS-----SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSST----TTT---EETTEEEHHHHHHHHCSEEEE
T ss_pred HHHHhhcc-----cCCCCEEEEecCccccCCCCHHHHhhcCCChhhccc----ccc---cccccccHHHHHHhhcCEEEe
Confidence 77776531 148899999999877665554444444444332110 000 001123577888999999999
Q ss_pred cCHHHHHHHHccccCCccchhhh--hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 401 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~ 401 (612)
+|+..++.+.+. .+|..++.++ ...++.+||||+|.+.|.|..+..+..+|+..++ ..+...+..+++++|++.+
T Consensus 213 ~S~~~~~~~~~~-~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~- 289 (485)
T 1rzu_A 213 VSPSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDDD- 289 (485)
T ss_dssp SCHHHHHHTTSH-HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCCS-
T ss_pred cCHhHHHHHhcc-ccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccch-hhHHHhHHHHHHhcCCCCC-
Confidence 999999998751 1232111111 1238999999999999998877777777877765 5667778889999999854
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
+.++|+|+||+.++||++.+++|+.++.+++++|+|+|+|+..+++.++++..++++++..+.+++.+.+..+|+.||++
T Consensus 290 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~ 369 (485)
T 1rzu_A 290 GSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAI 369 (485)
T ss_dssp SSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEE
T ss_pred CCeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEE
Confidence 24699999999999999999999999977899999999998768889999998887778766777888878899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---------ceEEEecccccccCCCCCCCHHHHHHHHHHHH-
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL- 551 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll- 551 (612)
|+||.+|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ ++.|+++++++|.+++
T Consensus 370 v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~ll~ 439 (485)
T 1rzu_A 370 IIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVR 439 (485)
T ss_dssp EECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHHHH
T ss_pred EECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEe----------CCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 899988 9999999999999999
Q ss_pred --HhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcC
Q 007224 552 --ATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 552 --~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~~ 591 (612)
++ ++.+.++++++.++.|||+.++++|+++|++++..+
T Consensus 440 ~~~~--~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 479 (485)
T 1rzu_A 440 YYHD--PKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLISKG 479 (485)
T ss_dssp HHTC--HHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHTC--
T ss_pred HhCC--HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhCCC
Confidence 45 778889999888899999999999999999987543
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-47 Score=409.84 Aligned_cols=423 Identities=24% Similarity=0.336 Sum_probs=327.3
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
++|||++|+.+++| ...||++.++..|+++|+++||+|+|+++.++...+.. ...+.+.+.....+......+|+
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~gv 75 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE----IGKIRVFGEEVQVKVSYEERGNL 75 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE----EEEEEETTEEEEEEEEEEEETTE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhh----hccccccCcccceeeeeccCCCc
Confidence 37999999999888 56899999999999999999999999999876554421 11122223445566666678999
Q ss_pred eEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcch-hHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccc
Q 007224 163 DRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 241 (612)
Q Consensus 163 ~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~ 241 (612)
+++.++. .++.+ ..+|++ +.++ ..++..++..+.++++.+-. ..++|| |||+|+|..+
T Consensus 76 ~v~~~~~-~~~~~-------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~D-ii~~~~~~~~ 134 (439)
T 3fro_A 76 RIYRIGG-GLLDS-------EDVYGP-----GWDGLIRKAVTFGRASVLLLNDLLR-------EEPLPD-VVHFHDWHTV 134 (439)
T ss_dssp EEEEEES-GGGGC-------SSTTCS-----HHHHHHHHHHHHHHHHHHHHHHHTT-------TSCCCS-EEEEESGGGH
T ss_pred eEEEecc-hhccc-------cccccC-----CcchhhhhhHHHHHHHHHHHHHHhc-------cCCCCe-EEEecchhhh
Confidence 9999987 44444 344442 5566 77788888888888877611 123799 9999999988
Q ss_pred hHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEE
Q 007224 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 321 (612)
+++.+++.. .++|+|+++|+...... +...+... ...+........+++..+..+|.+
T Consensus 135 ~~~~~~~~~-------~~~~~v~~~h~~~~~~~-~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~ad~i 192 (439)
T 3fro_A 135 FAGALIKKY-------FKIPAVFTIHRLNKSKL-PAFYFHEA--------------GLSELAPYPDIDPEHTGGYIADIV 192 (439)
T ss_dssp HHHHHHHHH-------HCCCEEEEESCCCCCCE-EHHHHHHT--------------TCGGGCCSSEECHHHHHHHHCSEE
T ss_pred hhHHHHhhc-------cCCCEEEEecccccccC-chHHhCcc--------------ccccccccceeeHhhhhhhhccEE
Confidence 888888754 48999999998654221 11000000 000000112346778889999999
Q ss_pred EecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCC
Q 007224 322 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 401 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~ 401 (612)
+++|+.+++.... .++.+. .++.+||||+|.+.|.|... ...+...+..+++++|++.
T Consensus 193 i~~S~~~~~~~~~--~~~~~~------~~i~vi~ngvd~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~-- 250 (439)
T 3fro_A 193 TTVSRGYLIDEWG--FFRNFE------GKITYVFNGIDCSFWNESYL------------TGSRDERKKSLLSKFGMDE-- 250 (439)
T ss_dssp EESCHHHHHHTHH--HHGGGT------TSEEECCCCCCTTTSCGGGS------------CSCHHHHHHHHHHHHTCCS--
T ss_pred EecCHHHHHHHhh--hhhhcC------CceeecCCCCCchhcCcccc------------cchhhhhHHHHHHHcCCCC--
Confidence 9999999888442 122332 38999999999999877521 1234556888999999962
Q ss_pred CCcEEEEEcCcc-cccCHHHHHHHHHhccc----CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH
Q 007224 402 NIPVIGFIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 402 ~~~~il~iGrl~-~~Kg~d~ll~a~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~ 476 (612)
+ ++|+|+||+. ++||++.+++|+.++.+ ++++|+|+|+|+..+.+.++++..++++.+.+.+..+.+.+..+|+
T Consensus 251 ~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 329 (439)
T 3fro_A 251 G-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYG 329 (439)
T ss_dssp C-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHT
T ss_pred C-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHH
Confidence 3 8999999999 99999999999999977 6899999999997778999999999884344444468888889999
Q ss_pred hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH-hhC
Q 007224 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYG 555 (612)
Q Consensus 477 ~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~-~~~ 555 (612)
.||++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ +|+++ ++.|+++++++|.++++ +
T Consensus 330 ~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~----------~~~d~~~la~~i~~ll~~~-- 396 (439)
T 3fro_A 330 SVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILV----------KAGDPGELANAILKALELS-- 396 (439)
T ss_dssp TCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEE----------CTTCHHHHHHHHHHHHHHT--
T ss_pred HCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEe----------CCCCHHHHHHHHHHHHhcC--
Confidence 9999999999999999999999999999999999999999887 99988 99999999999999999 6
Q ss_pred HHHHHHHHHHHHH--hcCCcHHHHHHHHHHHHHHHH
Q 007224 556 TQALAEMMKNGMA--QDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 556 ~~~~~~~~~~~~~--~~~sw~~~a~~~~~~y~~l~~ 589 (612)
++.+.++++++.. ++|||+.++++|+++|++++.
T Consensus 397 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 397 RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp TTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 4445555555532 779999999999999998874
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=364.67 Aligned_cols=403 Identities=17% Similarity=0.234 Sum_probs=283.1
Q ss_pred CCCccccccCCCceEEEEeccccCcc-----ccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCC
Q 007224 73 NGPSLMIVCGVGLNILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGD 147 (612)
Q Consensus 73 ~~~~~~~~~~~~MkIl~v~~~~~P~~-----~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~ 147 (612)
+.+.....++++|||++|+..|+|.. ..||.+.++..|+++|+++||+|+++++........
T Consensus 9 ~~~~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~------------- 75 (438)
T 3c48_A 9 HHSSGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE------------- 75 (438)
T ss_dssp ----------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS-------------
T ss_pred ccccCcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc-------------
Confidence 33445556677899999999888842 369999999999999999999999999874321110
Q ss_pred eeeEEEEEEeeecCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHh-hHhhccCCCCCCCCC
Q 007224 148 KIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGP 226 (612)
Q Consensus 148 ~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~ 226 (612)
.....+|++++.+....+... . ...-...+..+...+++. ++...
T Consensus 76 -------~~~~~~~v~v~~~~~~~~~~~-----------~------~~~~~~~~~~~~~~~~~~~~~~~~---------- 121 (438)
T 3c48_A 76 -------IVRVAENLRVINIAAGPYEGL-----------S------KEELPTQLAAFTGGMLSFTRREKV---------- 121 (438)
T ss_dssp -------EEEEETTEEEEEECCSCSSSC-----------C------GGGGGGGHHHHHHHHHHHHHHHTC----------
T ss_pred -------cccccCCeEEEEecCCCcccc-----------c------hhHHHHHHHHHHHHHHHHHHhccC----------
Confidence 011235677766642211000 0 000011122233333333 33221
Q ss_pred CCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCc
Q 007224 227 YGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 227 ~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+|| |||+|.|..++++.++... .++|+|+++|+........ +...... ....
T Consensus 122 -~~D-iv~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~~~~~------~~~~~~~-------------~~~~ 173 (438)
T 3c48_A 122 -TYD-LIHSHYWLSGQVGWLLRDL-------WRIPLIHTAHTLAAVKNSY------RDDSDTP-------------ESEA 173 (438)
T ss_dssp -CCS-EEEEEHHHHHHHHHHHHHH-------HTCCEEEECSSCHHHHSCC----------CCH-------------HHHH
T ss_pred -CCC-EEEeCCccHHHHHHHHHHH-------cCCCEEEEecCCccccccc------ccccCCc-------------chHH
Confidence 399 9999987766666655554 3789999999754211000 0000000 0001
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHH
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 386 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 386 (612)
...+.+..++.+|.++++|+..++.+.+ .+|++.+ ++.+||||+|.+.|.+....
T Consensus 174 ~~~~~~~~~~~~d~ii~~s~~~~~~~~~--~~g~~~~------k~~vi~ngvd~~~~~~~~~~----------------- 228 (438)
T 3c48_A 174 RRICEQQLVDNADVLAVNTQEEMQDLMH--HYDADPD------RISVVSPGADVELYSPGNDR----------------- 228 (438)
T ss_dssp HHHHHHHHHHHCSEEEESSHHHHHHHHH--HHCCCGG------GEEECCCCCCTTTSCCC--------------------
T ss_pred HHHHHHHHHhcCCEEEEcCHHHHHHHHH--HhCCChh------heEEecCCccccccCCcccc-----------------
Confidence 1234466788999999999999999875 2566544 89999999999988765311
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C--CcEEEEEeC----CchhHHHHHHHHHHHCC-
Q 007224 387 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGT----GKKPMEKQLEQLEILYP- 457 (612)
Q Consensus 387 ~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~--~~~lvivG~----g~~~~~~~l~~l~~~~~- 457 (612)
.++.+++++|++. +.++|+|+||+.++||++.+++|+.++.+ + +++|+|+|. |. +.+.++++..+++
T Consensus 229 ~~~~~r~~~~~~~--~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~--~~~~l~~~~~~~~l 304 (438)
T 3c48_A 229 ATERSRRELGIPL--HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA--TPDTYRHMAEELGV 304 (438)
T ss_dssp -CHHHHHHTTCCS--SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC--------CHHHHHHHHTTC
T ss_pred hhhhhHHhcCCCC--CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc--HHHHHHHHHHHcCC
Confidence 1234788888863 45899999999999999999999999975 3 799999998 54 5667777777654
Q ss_pred -CceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCC
Q 007224 458 -EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 458 -~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~ 536 (612)
+++.+.+..+.+.+..+|+.||++|+||..|+||++++|||+||+|||+++.||+.|++.++.+|+++ +
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~----------~ 374 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLV----------D 374 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEE----------S
T ss_pred CCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEEC----------C
Confidence 46888887788888899999999999999999999999999999999999999999999999999988 8
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHHHcCC
Q 007224 537 PVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGS 592 (612)
Q Consensus 537 ~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~~~~~ 592 (612)
+.|+++++++|.+++++ ++.+.++++++ +.+ |||+.++++|+++|++++....
T Consensus 375 ~~d~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~ 430 (438)
T 3c48_A 375 GHSPHAWADALATLLDD--DETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANEN 430 (438)
T ss_dssp SCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhcc
Confidence 99999999999999998 66666776665 345 9999999999999999987643
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=367.43 Aligned_cols=411 Identities=16% Similarity=0.143 Sum_probs=288.7
Q ss_pred CceEEEEeccccCcc---------ccccHHHHhhhhHHHHHhCCCeEEEEeecCCccc-ccCCccEEEEEEeCCeeeEEE
Q 007224 84 GLNILFVGTEVAPWS---------KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVR 153 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~---------~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 153 (612)
+|||++|+..++|.. ..||++.++..|+++|+++||+|+|+++..+... ..+... .
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~-------------~- 72 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGE-------------I- 72 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCS-------------E-
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhh-------------H-
Confidence 599999999887742 4799999999999999999999999998643211 110000 0
Q ss_pred EEEee--ecCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcE
Q 007224 154 FFHCH--KRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDV 231 (612)
Q Consensus 154 ~~~~~--~~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDv 231 (612)
... .+|++++.+..... . ... ...-+..+..+...+.+.++... .+||
T Consensus 73 --~~~~~~~gv~v~~~~~~~~--~---------~~~------~~~~~~~~~~~~~~l~~~l~~~~----------~~~D- 122 (499)
T 2r60_A 73 --DYYQETNKVRIVRIPFGGD--K---------FLP------KEELWPYLHEYVNKIINFYREEG----------KFPQ- 122 (499)
T ss_dssp --EECTTCSSEEEEEECCSCS--S---------CCC------GGGCGGGHHHHHHHHHHHHHHHT----------CCCS-
T ss_pred --HhccCCCCeEEEEecCCCc--C---------CcC------HHHHHHHHHHHHHHHHHHHHhcC----------CCCC-
Confidence 001 24677766642210 0 000 00000111123334445554421 1599
Q ss_pred EEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCC-cccccccccccCCCCCcCCcchhH
Q 007224 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINW 310 (612)
Q Consensus 232 vih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 310 (612)
|||+|.+..++++.++... .++|+|+++|+........ +...+.. ..+...+. ......+
T Consensus 123 ivh~~~~~~~~~~~~~~~~-------~~~p~v~~~H~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~ 183 (499)
T 2r60_A 123 VVTTHYGDGGLAGVLLKNI-------KGLPFTFTGHSLGAQKMEK---LNVNTSNFKEMDERFK---------FHRRIIA 183 (499)
T ss_dssp EEEEEHHHHHHHHHHHHHH-------HCCCEEEECSSCHHHHHHT---TCCCSTTSHHHHHHHC---------HHHHHHH
T ss_pred EEEEcCCcchHHHHHHHHh-------cCCcEEEEccCcccccchh---hccCCCCcchhhhhHH---------HHHHHHH
Confidence 9999987666666656554 4789999999764311000 0000000 00000000 0011123
Q ss_pred HHHHHHhcCEEEecCHHHHHHHHccccCC-c----cchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchH
Q 007224 311 MKAGILESDMVLTVSPHYAQELVSGEDKG-V----ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 311 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g-~----~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
.+..++.+|.++++|+..++.+.+...+| + +.+ ++.+||||+|.+.|.+... .
T Consensus 184 ~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~------ki~vi~ngvd~~~~~~~~~----------------~ 241 (499)
T 2r60_A 184 ERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDD------KFSVIPPGVNTRVFDGEYG----------------D 241 (499)
T ss_dssp HHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGG------GEEECCCCBCTTTSSSCCC----------------H
T ss_pred HHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCC------CeEEECCCcChhhcCccch----------------h
Confidence 46778899999999999999987520135 4 333 8999999999998876531 1
Q ss_pred HHHHHHHHHhC-----CCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C-CcEEEEEeC--Cc-----------hh
Q 007224 386 LLKEALQAEVG-----LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-NVQIIVLGT--GK-----------KP 444 (612)
Q Consensus 386 ~~k~~l~~~~g-----l~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~-~~~lvivG~--g~-----------~~ 444 (612)
..+..+++++| ++. +.++|+|+||+.++||++.+++|+.++.+ + .++|+|+|+ |+ ..
T Consensus 242 ~~~~~~r~~~~~~~~~~~~--~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~ 319 (499)
T 2r60_A 242 KIKAKITKYLERDLGSERM--ELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKE 319 (499)
T ss_dssp HHHHHHHHHHHHHSCGGGT--TSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHH
T ss_pred hhHHHHHHHhcccccccCC--CCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchH
Confidence 22466778877 653 45899999999999999999999999965 2 468999998 32 11
Q ss_pred HHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc----CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec
Q 007224 445 MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 518 (612)
Q Consensus 445 ~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~a----di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 518 (612)
|.+.++++..+++ +++.+.+..+.+.+..+|+.| |++|+||.+|+||++++|||+||+|||+|+.||+.|++.+
T Consensus 320 y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~ 399 (499)
T 2r60_A 320 ILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDG 399 (499)
T ss_dssp HHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGG
T ss_pred HHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcC
Confidence 2778888888765 468888887888888999999 9999999999999999999999999999999999999999
Q ss_pred CceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHHHcCCC
Q 007224 519 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGSE 593 (612)
Q Consensus 519 g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~~~~~~ 593 (612)
+.+|+++ ++.|+++++++|.+++++ ++.+.++++++ +.++|||+.++++|+++|++++.....
T Consensus 400 ~~~g~l~----------~~~d~~~la~~i~~ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~ 465 (499)
T 2r60_A 400 GKYGVLV----------DPEDPEDIARGLLKAFES--EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDE 465 (499)
T ss_dssp GTSSEEE----------CTTCHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC---
T ss_pred CceEEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhh
Confidence 9999988 999999999999999997 66666776665 456799999999999999999876443
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=351.88 Aligned_cols=369 Identities=21% Similarity=0.275 Sum_probs=279.7
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCccc-ccCCccEEEEEEeCCeeeEEEEEEeeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|++|||++|+..++|. .||.+.++..|+++| +||+|+|+++..+... ..++ ...
T Consensus 2 ~~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~---------------------~~~ 56 (394)
T 3okp_A 2 SASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD---------------------KTL 56 (394)
T ss_dssp --CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH---------------------TTC
T ss_pred CCCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc---------------------ccc
Confidence 5679999999988886 899999999999999 6999999999754321 1000 113
Q ss_pred CceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCcc
Q 007224 161 GVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 240 (612)
Q Consensus 161 gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~ 240 (612)
++.++.+....++ .. ..+...+.+.++.. +|| +||+|....
T Consensus 57 ~~~~~~~~~~~~~---------------------~~-----~~~~~~l~~~~~~~------------~~D-vv~~~~~~~ 97 (394)
T 3okp_A 57 DYEVIRWPRSVML---------------------PT-----PTTAHAMAEIIRER------------EID-NVWFGAAAP 97 (394)
T ss_dssp SSEEEEESSSSCC---------------------SC-----HHHHHHHHHHHHHT------------TCS-EEEESSCTT
T ss_pred ceEEEEccccccc---------------------cc-----hhhHHHHHHHHHhc------------CCC-EEEECCcch
Confidence 4555544321110 00 12233444444443 699 889987544
Q ss_pred c-hHHHHHHHhhcCCCCCCCc-eEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhc
Q 007224 241 S-LIPCYLKTMYKPKGMYKSA-KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILES 318 (612)
Q Consensus 241 ~-~~~~~l~~~~~~~~~~~~~-~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~a 318 (612)
. ++..+++. .++ ++++++|+...... .......+++..++.+
T Consensus 98 ~~~~~~~~~~--------~~~~~~i~~~h~~~~~~~----------------------------~~~~~~~~~~~~~~~~ 141 (394)
T 3okp_A 98 LALMAGTAKQ--------AGASKVIASTHGHEVGWS----------------------------MLPGSRQSLRKIGTEV 141 (394)
T ss_dssp GGGGHHHHHH--------TTCSEEEEECCSTHHHHT----------------------------TSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHh--------cCCCcEEEEeccchhhhh----------------------------hcchhhHHHHHHHHhC
Confidence 3 34434433 355 48889996432000 0012334567788999
Q ss_pred CEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCC
Q 007224 319 DMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 319 d~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~ 398 (612)
|.++++|+..++.+.+. ++. ..++.+||||+|.+.|.|.. ...+..+++++|++
T Consensus 142 d~ii~~s~~~~~~~~~~--~~~-------~~~~~vi~ngv~~~~~~~~~-----------------~~~~~~~~~~~~~~ 195 (394)
T 3okp_A 142 DVLTYISQYTLRRFKSA--FGS-------HPTFEHLPSGVDVKRFTPAT-----------------PEDKSATRKKLGFT 195 (394)
T ss_dssp SEEEESCHHHHHHHHHH--HCS-------SSEEEECCCCBCTTTSCCCC-----------------HHHHHHHHHHTTCC
T ss_pred CEEEEcCHHHHHHHHHh--cCC-------CCCeEEecCCcCHHHcCCCC-----------------chhhHHHHHhcCCC
Confidence 99999999999998862 222 12899999999999887742 22367889999987
Q ss_pred CCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH
Q 007224 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 399 ~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~ 476 (612)
. +.++|+|+||+.++||++.+++|+.++.+ ++++|+|+|+|+ ..+.++++......++.+.+..+.+.+..+|+
T Consensus 196 ~--~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~ 271 (394)
T 3okp_A 196 D--TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNVKFLGRLEYQDMINTLA 271 (394)
T ss_dssp T--TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGEEEEESCCHHHHHHHHH
T ss_pred c--CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHH
Confidence 4 44899999999999999999999999866 699999999987 66777777755556788888888888899999
Q ss_pred hcCEEEeCCCC-------CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHH
Q 007224 477 GADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 477 ~adi~l~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ 549 (612)
.||++|+||.+ |+||++++|||++|+|||+++.||..|++.++ +|+++ ++.|+++++++|.+
T Consensus 272 ~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~----------~~~d~~~l~~~i~~ 340 (394)
T 3okp_A 272 AADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVV----------EGSDVDKLSELLIE 340 (394)
T ss_dssp HCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEEC----------CTTCHHHHHHHHHH
T ss_pred hCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEe----------CCCCHHHHHHHHHH
Confidence 99999999999 99999999999999999999999999999999 99987 89999999999999
Q ss_pred HHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHHHcCCC
Q 007224 550 ALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGSE 593 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~~~~~~ 593 (612)
++++ ++.+.++++++ +.++|||+.++++|+++|+++......
T Consensus 341 l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~~~ 385 (394)
T 3okp_A 341 LLDD--PIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKLAA 385 (394)
T ss_dssp HHTC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC----
T ss_pred HHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCcch
Confidence 9997 66667776665 457899999999999999998755443
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=336.65 Aligned_cols=368 Identities=18% Similarity=0.182 Sum_probs=263.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|+.-++...| |. .||.+.++..|+++|+++||+|+++++..+.... ...+++.+
T Consensus 14 ~~~~~~~~~~-p~--~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-----------------------~~~~~i~~ 67 (394)
T 2jjm_A 14 MKLKIGITCY-PS--VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN-----------------------KVYPNIYF 67 (394)
T ss_dssp -CCEEEEECC-C----CHHHHHHHHHHHHHHHTTCEEEEECSSCC---------------------------CCCTTEEE
T ss_pred heeeeehhcC-CC--CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc-----------------------ccCCceEE
Confidence 5555555554 53 7999999999999999999999999986321100 01123333
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchH-
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI- 243 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~- 243 (612)
..++.+.+. .+. +.. .. ..+...+.+.++.. +|| |||+|.+....+
T Consensus 68 ~~~~~~~~~-----------~~~------~~~--~~-~~~~~~l~~~l~~~------------~~D-vv~~~~~~~~~~~ 114 (394)
T 2jjm_A 68 HEVTVNQYS-----------VFQ------YPP--YD-LALASKMAEVAQRE------------NLD-ILHVHYAIPHAIC 114 (394)
T ss_dssp ECCCCC---------------CC------SCC--HH-HHHHHHHHHHHHHH------------TCS-EEEECSSTTHHHH
T ss_pred Eeccccccc-----------ccc------ccc--cc-HHHHHHHHHHHHHc------------CCC-EEEEcchhHHHHH
Confidence 322211100 000 000 01 12233444444443 699 999997554433
Q ss_pred HHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEe
Q 007224 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 323 (612)
..+++.... .++|+++++|+.... .+ +. ......+++..+..+|.+++
T Consensus 115 ~~~~~~~~~-----~~~p~v~~~h~~~~~-~~--------~~------------------~~~~~~~~~~~~~~ad~ii~ 162 (394)
T 2jjm_A 115 AYLAKQMIG-----ERIKIVTTLHGTDIT-VL--------GS------------------DPSLNNLIRFGIEQSDVVTA 162 (394)
T ss_dssp HHHHHHHTT-----TCSEEEEECCHHHHH-TT--------TT------------------CTTTHHHHHHHHHHSSEEEE
T ss_pred HHHHHHhhc-----CCCCEEEEEecCccc-cc--------CC------------------CHHHHHHHHHHHhhCCEEEE
Confidence 333333321 268999999974320 00 00 01123456777889999999
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~ 403 (612)
+|+..++.+.+. ++. . .++.+||||+|.+.|.+.. +..++++++++. +.
T Consensus 163 ~s~~~~~~~~~~--~~~-~------~~~~vi~ngv~~~~~~~~~--------------------~~~~~~~~~~~~--~~ 211 (394)
T 2jjm_A 163 VSHSLINETHEL--VKP-N------KDIQTVYNFIDERVYFKRD--------------------MTQLKKEYGISE--SE 211 (394)
T ss_dssp SCHHHHHHHHHH--TCC-S------SCEEECCCCCCTTTCCCCC--------------------CHHHHHHTTCC-----
T ss_pred CCHHHHHHHHHh--hCC-c------ccEEEecCCccHHhcCCcc--------------------hHHHHHHcCCCC--CC
Confidence 999999998862 222 1 2899999999999887653 345677888753 45
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCE
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi 480 (612)
++|+|+||+.++||++.+++|+.++.+ .+++|+|+|+|+ ..+.++++..+++ +++.+.+ + .+.+..+|+.||+
T Consensus 212 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~g-~-~~~~~~~~~~adv 287 (394)
T 2jjm_A 212 KILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGP--EFCTILQLVKNLHIEDRVLFLG-K-QDNVAELLAMSDL 287 (394)
T ss_dssp CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCT--THHHHHHHHHTTTCGGGBCCCB-S-CSCTHHHHHTCSE
T ss_pred eEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCch--HHHHHHHHHHHcCCCCeEEEeC-c-hhhHHHHHHhCCE
Confidence 899999999999999999999999976 579999999987 4667777777664 3455554 3 3445679999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
+|+||.+|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++ ++.+.
T Consensus 288 ~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~----------~~~d~~~la~~i~~l~~~--~~~~~ 355 (394)
T 2jjm_A 288 MLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLC----------EVGDTTGVADQAIQLLKD--EELHR 355 (394)
T ss_dssp EEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEE----------CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred EEeccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEe----------CCCCHHHHHHHHHHHHcC--HHHHH
Confidence 999999999999999999999999999999999999999999988 899999999999999998 66666
Q ss_pred HHHHHH---HHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 561 EMMKNG---MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 561 ~~~~~~---~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
++++++ +.+.|||+.++++|+++|++++..
T Consensus 356 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 388 (394)
T 2jjm_A 356 NMGERARESVYEQFRSEKIVSQYETIYYDVLRD 388 (394)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 776665 358999999999999999998754
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-39 Score=369.24 Aligned_cols=427 Identities=15% Similarity=0.180 Sum_probs=281.9
Q ss_pred CceEEEEecccc---------CccccccHHHHhhh--------hHHHHHhCCCeEE----EEeecCCcccccCCccEEEE
Q 007224 84 GLNILFVGTEVA---------PWSKTGGLGDVLGG--------LPPALAANGHRVM----TIAPRYDQYKDAWDTDVVIE 142 (612)
Q Consensus 84 ~MkIl~v~~~~~---------P~~~~GG~~~~~~~--------La~~L~~~Gh~V~----vit~~~~~~~~~~~~~~~~~ 142 (612)
.|+|++|+...+ |. +||...|+.+ |+++|+++||+|+ |+|...+.. ..++.....+
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~d--tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~-~g~~y~~~~e 354 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPD--TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDA-VGTTCGERLE 354 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTT--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTC-TTSSTTSSEE
T ss_pred eeEEEEEcCCcccCccccCCCCC--CCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCC-CCCccCCcce
Confidence 589999998766 65 9999999984 7777788999886 888875432 1111111111
Q ss_pred EEeCCeeeEEEEEEeeecCceEEEEeChh---hhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHH-HHHHHhhHhhccC
Q 007224 143 LKVGDKIEKVRFFHCHKRGVDRVFVDHPW---FLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLC-QAALEAPRILNLN 218 (612)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~---~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 218 (612)
. + ...+|+.++.++... +..+ |-. ...++. | ...|. ..+..+++...
T Consensus 355 ~-i-----------~~~~gv~I~RvP~~~~~g~l~~--~l~-k~~L~~------~------L~~F~~~~l~~il~~~~-- 405 (816)
T 3s28_A 355 R-V-----------YDSEYCDILRVPFRTEKGIVRK--WIS-RFEVWP------Y------LETYTEDAAVELSKELN-- 405 (816)
T ss_dssp E-C-----------TTCSSEEEEEECEEETTEEECS--CCC-TTTCGG------G------HHHHHHHHHHHHHHHCS--
T ss_pred e-e-----------cCcCCeEEEEecCCCccccccc--ccc-HHHHHH------H------HHHHHHHHHHHHHHhcC--
Confidence 0 0 002466676664211 0000 000 011111 1 12233 33334444332
Q ss_pred CCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCc-cccccccccc
Q 007224 219 SNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPA-QFKSSFDFID 297 (612)
Q Consensus 219 ~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~ 297 (612)
.+|| |||+|.|.+++++.+++.. .++|+|+|.|+........ .+... .+...+.+
T Consensus 406 --------~~PD-VIHsH~~~sglva~llar~-------~gvP~V~T~Hsl~~~k~~~------~~~~~~~~~~~y~~-- 461 (816)
T 3s28_A 406 --------GKPD-LIIGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKYPD------SDIYWKKLDDKYHF-- 461 (816)
T ss_dssp --------SCCS-EEEEEHHHHHHHHHHHHHH-------HTCCEEEECSCCHHHHSTT------TTTTHHHHHHHHCH--
T ss_pred --------CCCe-EEEeCCchHHHHHHHHHHH-------cCCCEEEEEeccccccccc------ccchhhhHHHHHHH--
Confidence 2699 9999999998888888776 4899999999765322110 00000 00000000
Q ss_pred CCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccc-cCCcc----ch---------hhhhccCeEEeeCCCccCcc
Q 007224 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE----LD---------NIIRKTGIKGIVNGMDVQEW 363 (612)
Q Consensus 298 ~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~-~~g~~----~~---------~~~~~~~i~vI~Ngvd~~~~ 363 (612)
...+...+..+..||.|+++|+..++.+.... .++.. .. ... ..++.+||||+|.+.|
T Consensus 462 -------~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~-~~ki~VIpnGVD~~~F 533 (816)
T 3s28_A 462 -------SCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVF-DPKFNIVSPGADMSIY 533 (816)
T ss_dssp -------HHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTT-CTTEEECCCCCCTTTS
T ss_pred -------HHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccC-CCCEEEECCCcCHHHc
Confidence 00112244578899999999999998643210 11110 00 001 1289999999999999
Q ss_pred CCCCccc--cccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEe
Q 007224 364 NPLTDKY--IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG 439 (612)
Q Consensus 364 ~p~~~~~--~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG 439 (612)
.|...+. +...++.. .....++...++.+|+..+++.++|+|+||+.++||++.+++|+.++.+ ++++|+|+|
T Consensus 534 ~P~~~~~~Rl~~~~~~i---~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG 610 (816)
T 3s28_A 534 FPYTEEKRRLTKFHSEI---EELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVG 610 (816)
T ss_dssp CCTTCTTTCCGGGHHHH---HHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEEC
T ss_pred Cccchhhhhhhhccccc---cccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEe
Confidence 8865321 00000000 0000011123455666445677999999999999999999999999976 689999999
Q ss_pred CCch---------hHHHHHHHHHHHCC--CceEEEecc----ChHHHHHHHH-hcCEEEeCCCCCCCcHHHHHHHHcCCc
Q 007224 440 TGKK---------PMEKQLEQLEILYP--EKARGVAKF----NIPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTV 503 (612)
Q Consensus 440 ~g~~---------~~~~~l~~l~~~~~--~~i~~~~~~----~~~~~~~~l~-~adi~l~pS~~E~~gl~~lEAma~G~P 503 (612)
+|.. .+.+.++++..+++ +++.+.+.. +.+.+..+++ .+|++|+||.+|+||++++|||+||+|
T Consensus 611 ~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~P 690 (816)
T 3s28_A 611 GDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 690 (816)
T ss_dssp CCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCC
T ss_pred CCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCC
Confidence 9872 35677778877776 466666533 2355666777 689999999999999999999999999
Q ss_pred eEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHH----HhhCHHHHHHHHHHH---HHhcCCcHHH
Q 007224 504 PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL----ATYGTQALAEMMKNG---MAQDLSWKGP 576 (612)
Q Consensus 504 vI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll----~~~~~~~~~~~~~~~---~~~~~sw~~~ 576 (612)
||+|+.||+.|++.++.+|+++ ++.|+++++++|.+++ .+ ++.+.++++++ +.++|||+.+
T Consensus 691 VIasd~GG~~EiV~dg~~Gllv----------~p~D~e~LA~aI~~lL~~Ll~d--~~~~~~m~~~ar~~a~~~fSwe~~ 758 (816)
T 3s28_A 691 TFATCKGGPAEIIVHGKSGFHI----------DPYHGDQAADTLADFFTKCKED--PSHWDEISKGGLQRIEEKYTWQIY 758 (816)
T ss_dssp EEEESSBTHHHHCCBTTTBEEE----------CTTSHHHHHHHHHHHHHHHHHC--THHHHHHHHHHHHHHHHSCCHHHH
T ss_pred EEEeCCCChHHHHccCCcEEEe----------CCCCHHHHHHHHHHHHHHhccC--HHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999988 9999999999998777 66 56667777666 4589999999
Q ss_pred HHHHHHHHHHHHH
Q 007224 577 AKKWEETLLNLEV 589 (612)
Q Consensus 577 a~~~~~~y~~l~~ 589 (612)
+++|+++|+.+..
T Consensus 759 a~~ll~lY~~~g~ 771 (816)
T 3s28_A 759 SQRLLTLTGVYGF 771 (816)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhH
Confidence 9999999998753
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=335.49 Aligned_cols=363 Identities=14% Similarity=0.122 Sum_probs=257.5
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecC
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
|++|||++++.. + ..||.+.++..|+++|+++||+|++++...+. +..+. ..+
T Consensus 38 ~~~mkIl~v~~~--~--~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~--~~~~~---------------------~~~ 90 (416)
T 2x6q_A 38 LKGRSFVHVNST--S--FGGGVAEILHSLVPLLRSIGIEARWFVIEGPT--EFFNV---------------------TKT 90 (416)
T ss_dssp TTTCEEEEEESC--S--SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCH--HHHHH---------------------HHH
T ss_pred hhccEEEEEeCC--C--CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCc--chhhh---------------------hcc
Confidence 668999999976 3 37999999999999999999999999875321 00000 000
Q ss_pred ceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcch-hHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCcc
Q 007224 162 VDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 240 (612)
Q Consensus 162 v~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~ 240 (612)
+. ..+.. ...+. +... ...+..+...+.+.++. .+|| |||+|++..
T Consensus 91 ~~-------~~~~~-------~~~~~------~~~~~~~~~~~~~~~~~~~l~~------------~~~D-vv~~~~~~~ 137 (416)
T 2x6q_A 91 FH-------NALQG-------NESLK------LTEEMKELYLNVNRENSKFIDL------------SSFD-YVLVHDPQP 137 (416)
T ss_dssp HH-------HHHTT-------CCSCC------CCHHHHHHHHHHHHHHHHSSCG------------GGSS-EEEEESSTT
T ss_pred cc-------eeecc-------ccccc------ccHHHHHHHHHHHHHHHHHHhh------------cCCC-EEEEeccch
Confidence 00 00000 00110 1111 11122222333333332 2699 999998765
Q ss_pred chHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCE
Q 007224 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 320 (612)
..+..+++ ..+|+++++|+..... ....+.+++..+..+|.
T Consensus 138 ~~~~~~~~---------~~~p~v~~~h~~~~~~------------------------------~~~~~~~~~~~~~~~~~ 178 (416)
T 2x6q_A 138 AALIEFYE---------KKSPWLWRCHIDLSSP------------------------------NREFWEFLRRFVEKYDR 178 (416)
T ss_dssp GGGGGGSC---------CCSCEEEECCSCCSSC------------------------------CHHHHHHHHHHHTTSSE
T ss_pred hhHHHHHH---------hcCCEEEEEccccCCc------------------------------cHHHHHHHHHHHHhCCE
Confidence 44332211 2389999999643210 01233455666778888
Q ss_pred EE-ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 321 VL-TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 321 vi-~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
++ ++|+..++.+ + ..++.+||||+|...+.+... ....+..+++++|++.
T Consensus 179 ~i~~~s~~~~~~~--------~------~~~~~vi~ngvd~~~~~~~~~---------------~~~~~~~~r~~~~~~~ 229 (416)
T 2x6q_A 179 YIFHLPEYVQPEL--------D------RNKAVIMPPSIDPLSEKNVEL---------------KQTEILRILERFDVDP 229 (416)
T ss_dssp EEESSGGGSCTTS--------C------TTTEEECCCCBCTTSTTTSCC---------------CHHHHHHHHHHTTCCT
T ss_pred EEEechHHHHhhC--------C------ccceEEeCCCCChhhhccccc---------------ChhhHHHHHHHhCCCC
Confidence 76 5665443321 1 127999999999877654321 1223567888999874
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCc---hhHHHHHHHHHHHCC--CceEEEecc---ChH
Q 007224 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK---KPMEKQLEQLEILYP--EKARGVAKF---NIP 469 (612)
Q Consensus 400 ~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~---~~~~~~l~~l~~~~~--~~i~~~~~~---~~~ 469 (612)
+.++|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+ +.+.+.++++..+++ +++.+.+.+ +.+
T Consensus 230 --~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~ 307 (416)
T 2x6q_A 230 --EKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAR 307 (416)
T ss_dssp --TSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHH
T ss_pred --CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHH
Confidence 45899999999999999999999999966 689999999986 234566777766654 467777644 356
Q ss_pred HHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHH
Q 007224 470 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 470 ~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ 549 (612)
.+..+|+.||++|+||.+|+||++++|||+||+|||+++.||+.|++.++.+|+++ + |+++++++|.+
T Consensus 308 ~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~----------~--d~~~la~~i~~ 375 (416)
T 2x6q_A 308 EVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLV----------R--DANEAVEVVLY 375 (416)
T ss_dssp HHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEE----------S--SHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEE----------C--CHHHHHHHHHH
Confidence 78889999999999999999999999999999999999999999999999999987 5 99999999999
Q ss_pred HHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHH
Q 007224 550 ALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
++++ ++.+.++++++ +.++|||+.++++|+++|++++
T Consensus 376 ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 376 LLKH--PEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHHC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred HHhC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 9998 66677777666 4578999999999999998764
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=333.27 Aligned_cols=367 Identities=18% Similarity=0.194 Sum_probs=262.6
Q ss_pred cccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEee
Q 007224 79 IVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCH 158 (612)
Q Consensus 79 ~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (612)
....++|||++|+..++|. .||.+.++..|+++|+++||+|+++++...... +.... .
T Consensus 15 ~~~~~~MkIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--~~~~~------------------~ 72 (406)
T 2gek_A 15 VPRGSHMRIGMVCPYSFDV--PGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVK--LPDYV------------------V 72 (406)
T ss_dssp ------CEEEEECSSCTTS--CCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSC--CCTTE------------------E
T ss_pred ccCCCcceEEEEeccCCCC--CCcHHHHHHHHHHHHHHCCCeEEEEecCCcccc--CCccc------------------c
Confidence 3444579999999765553 699999999999999999999999998743220 00000 0
Q ss_pred ecCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCC
Q 007224 159 KRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW 238 (612)
Q Consensus 159 ~~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~ 238 (612)
..+ +++.+... .. + ..+. +. ..+...+.+.++.. +|| |||+|.+
T Consensus 73 ~~~-~~~~~~~~---~~--~----~~~~-------~~------~~~~~~l~~~l~~~------------~~D-ii~~~~~ 116 (406)
T 2gek_A 73 SGG-KAVPIPYN---GS--V----ARLR-------FG------PATHRKVKKWIAEG------------DFD-VLHIHEP 116 (406)
T ss_dssp ECC-CCC----------------------------CC------HHHHHHHHHHHHHH------------CCS-EEEEECC
T ss_pred cCC-cEEecccc---CC--c----cccc-------cc------HHHHHHHHHHHHhc------------CCC-EEEECCc
Confidence 011 11111100 00 0 0000 00 01223334444443 699 8899887
Q ss_pred ccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhc
Q 007224 239 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILES 318 (612)
Q Consensus 239 ~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~a 318 (612)
....+...+... .++|+++++|+...... .. .....+++..+..+
T Consensus 117 ~~~~~~~~~~~~-------~~~~~i~~~h~~~~~~~--------------~~--------------~~~~~~~~~~~~~~ 161 (406)
T 2gek_A 117 NAPSLSMLALQA-------AEGPIVATFHTSTTKSL--------------TL--------------SVFQGILRPYHEKI 161 (406)
T ss_dssp CSSSHHHHHHHH-------EESSEEEEECCCCCSHH--------------HH--------------HHHHSTTHHHHTTC
T ss_pred cchHHHHHHHHh-------cCCCEEEEEcCcchhhh--------------hH--------------HHHHHHHHHHHhhC
Confidence 766554444443 37899999997432110 00 01112233567899
Q ss_pred CEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCC
Q 007224 319 DMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 319 d~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~ 398 (612)
|.++++|+..++.+.+. ++. .++ +||||+|...|.+.... .+++
T Consensus 162 d~ii~~s~~~~~~~~~~--~~~--------~~~-vi~~~v~~~~~~~~~~~-------------------------~~~~ 205 (406)
T 2gek_A 162 IGRIAVSDLARRWQMEA--LGS--------DAV-EIPNGVDVASFADAPLL-------------------------DGYP 205 (406)
T ss_dssp SEEEESSHHHHHHHHHH--HSS--------CEE-ECCCCBCHHHHHTCCCC-------------------------TTCS
T ss_pred CEEEECCHHHHHHHHHh--cCC--------CcE-EecCCCChhhcCCCchh-------------------------hhcc
Confidence 99999999999988751 332 278 99999998877654311 1122
Q ss_pred CCCCCcEEEEEcCc-ccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007224 399 VDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 399 ~~~~~~~il~iGrl-~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l 475 (612)
++.++|+|+||+ .+.||++.+++++.++.+ ++++|+|+|.++. +.++++..++..++.+.+..+.+++..+|
T Consensus 206 --~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~---~~l~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (406)
T 2gek_A 206 --REGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE---DELREQAGDLAGHLRFLGQVDDATKASAM 280 (406)
T ss_dssp --CSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH---HHHHHHTGGGGGGEEECCSCCHHHHHHHH
T ss_pred --CCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH---HHHHHHHHhccCcEEEEecCCHHHHHHHH
Confidence 245799999999 999999999999999976 6899999999883 66777766655568888777888888999
Q ss_pred HhcCEEEeCCC-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 476 AGADFILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 476 ~~adi~l~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
+.||++|+||. .|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 281 ~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~- 349 (406)
T 2gek_A 281 RSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLV----------PVDDADGMAAALIGILED- 349 (406)
T ss_dssp HHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEEC----------CTTCHHHHHHHHHHHHHC-
T ss_pred HHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHcC-
Confidence 99999999996 899999999999999999999999999999999999987 899999999999999998
Q ss_pred CHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHHHcC
Q 007224 555 GTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 555 ~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~~~~ 591 (612)
++.+.++++++. .+.|||+.++++|+++|++++...
T Consensus 350 -~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 387 (406)
T 2gek_A 350 -DQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGAG 387 (406)
T ss_dssp -HHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTT
T ss_pred -HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 666677766653 348999999999999999998554
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=335.89 Aligned_cols=362 Identities=16% Similarity=0.158 Sum_probs=257.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++..+.| .||.+.++..|+++|+++||+|+++++..... ..+|+++
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--------------------------~~~~~~v 51 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGD--------------------------CPKAFEL 51 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSC--------------------------CCTTCEE
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCC--------------------------CCCCcEE
Confidence 899999998777 59999999999999999999999999763210 0135555
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.++.+.+ .+..++..+...+.+.++.. +|| |||+|.+..++..
T Consensus 52 ~~~~~~~~-----------------------~~~~~~~~~~~~l~~~i~~~------------~~D-vv~~~~~~~~~~~ 95 (374)
T 2iw1_A 52 IQVPVKSH-----------------------TNHGRNAEYYAWVQNHLKEH------------PAD-RVVGFNKMPGLDV 95 (374)
T ss_dssp EECCCCCS-----------------------SHHHHHHHHHHHHHHHHHHS------------CCS-EEEESSCCTTCSE
T ss_pred EEEccCcc-----------------------cchhhHHHHHHHHHHHHhcc------------CCC-EEEEecCCCCcee
Confidence 55432211 11122333444444444443 699 8999875433211
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHH--hcCEEE
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL--ESDMVL 322 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--~ad~vi 322 (612)
.+... ...++.+.+.|+... .... .......+.+..+. .+|.++
T Consensus 96 ~~~~~-------~~~~~~~~~~~~~~~----------------~~~~-----------~~~~~~~~~~~~~~~~~~d~ii 141 (374)
T 2iw1_A 96 YFAAD-------VCYAEKVAQEKGFLY----------------RLTS-----------RYRHYAAFERATFEQGKSTKLM 141 (374)
T ss_dssp EECCS-------CCHHHHHHHHCCHHH----------------HTSH-----------HHHHHHHHHHHHHSTTCCCEEE
T ss_pred eeccc-------cccceeeeecccchh----------------hhcH-----------HHHHHHHHHHHHhhccCCcEEE
Confidence 00000 011222222232110 0000 00001122233333 699999
Q ss_pred ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCC
Q 007224 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~ 402 (612)
++|+..++.+.+ .+|++.+ ++.+||||+|.+.|.+... ...+..+++++|++. +
T Consensus 142 ~~s~~~~~~~~~--~~~~~~~------~~~vi~ngv~~~~~~~~~~----------------~~~~~~~~~~~~~~~--~ 195 (374)
T 2iw1_A 142 MLTDKQIADFQK--HYQTEPE------RFQILPPGIYPDRKYSEQI----------------PNSREIYRQKNGIKE--Q 195 (374)
T ss_dssp ESCHHHHHHHHH--HHCCCGG------GEEECCCCCCGGGSGGGSC----------------TTHHHHHHHHTTCCT--T
T ss_pred EcCHHHHHHHHH--HhCCChh------heEEecCCcCHHhcCcccc----------------hhHHHHHHHHhCCCC--C
Confidence 999999999875 2566544 8999999999988866431 122567889999874 4
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhccc---CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHh
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~ 477 (612)
.++|+|+||+.++||++.+++|+..+.+ ++++|+|+|.|.. +.++++..+++ .++.+.+. .+.+..+|+.
T Consensus 196 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ 270 (374)
T 2iw1_A 196 QNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP---RKFEALAEKLGVRSNVHFFSG--RNDVSELMAA 270 (374)
T ss_dssp CEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHH
T ss_pred CeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---HHHHHHHHHcCCCCcEEECCC--cccHHHHHHh
Confidence 5899999999999999999999999965 4899999999873 45566655554 45776664 3446679999
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCC-CCCHHHHHHHHHHHHHhhCH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD-PVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~-~~d~~~la~~l~~ll~~~~~ 556 (612)
||++|+||.+|+||++++|||+||+|||+++.||..|++.++.+|+++ + +.|+++++++|.+++++ +
T Consensus 271 ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~l~~~i~~l~~~--~ 338 (374)
T 2iw1_A 271 ADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI----------AEPFSQEQLNEVLRKALTQ--S 338 (374)
T ss_dssp CSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE----------CSSCCHHHHHHHHHHHHHC--H
T ss_pred cCEEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEe----------CCCCCHHHHHHHHHHHHcC--h
Confidence 999999999999999999999999999999999999999999999987 6 88999999999999997 7
Q ss_pred HHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHH
Q 007224 557 QALAEMMKNGM--AQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 557 ~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+.+.++++++. .+.++|+..++++.++++..+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 339 PLRMAWAENARHYADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 77777777763 467899999999999998654
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=332.20 Aligned_cols=357 Identities=15% Similarity=0.135 Sum_probs=256.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++|+..+ |. .||+++++..|+++|+++ |+|++++........ ......
T Consensus 1 MkI~~v~~~~-p~--~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~-------------------------~~~~~~ 51 (413)
T 3oy2_A 1 MKLIIVGAHS-SV--PSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSV-------------------------HANIEE 51 (413)
T ss_dssp CEEEEEEECT-TC--CSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCS-------------------------CSSSEE
T ss_pred CeEEEecCCC-CC--CCCHHHHHHHHHHHHHhc-CCeEEEeecCCCccc-------------------------cccccc
Confidence 9999999864 54 799999999999999999 999999976321000 000110
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+ +... ...+. .+.+ ..+ ....+.+.++.. +|| |||+|.|...+..
T Consensus 52 ~--~~~~-~~~~~-------~~~~-------~~~-----~~~~l~~~l~~~------------~~D-iv~~~~~~~~~~~ 96 (413)
T 3oy2_A 52 F--DAQT-AEHVR-------GLNE-------QGF-----YYSGLSEFIDVH------------KPD-IVMIYNDPIVIGN 96 (413)
T ss_dssp E--EHHH-HHHHT-------TCCS-------TTC-----CHHHHHHHHHHH------------CCS-EEEEEECHHHHHH
T ss_pred C--Cccc-ccccc-------cccc-------ccc-----hHHHHHHHHHhc------------CCC-EEEEcchHHHHHH
Confidence 0 0000 00000 0100 000 011122233332 699 9999965554433
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcC--EEE
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD--MVL 322 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad--~vi 322 (612)
.+.+ ..+ .....+++...|+..... + ..++..+..+| .++
T Consensus 97 ~~~~-~~~---~~~~~~~~~~~~~~~~~~--------------------------------~--~~~~~~~~~~~~~~ii 138 (413)
T 3oy2_A 97 YLLA-MGK---CSHRTKIVLYVDLVSKNI--------------------------------R--ENLWWIFSHPKVVGVM 138 (413)
T ss_dssp HHHH-GGG---CCSCCEEEEEECCCSBSC--------------------------------C--GGGGGGGGCTTEEEEE
T ss_pred HHHH-hcc---CCCCCceeeeccccchhh--------------------------------H--HHHHHHHhccCCceEE
Confidence 3333 221 001345666666432100 0 01234467878 999
Q ss_pred ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCC
Q 007224 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~ 402 (612)
++|+..++.+.+ +|.+ . ++.+||||+|.+.|. ..+++++++.+++
T Consensus 139 ~~S~~~~~~~~~---~~~~-~------~~~vi~ngvd~~~~~-------------------------~~~~~~~~~~~~~ 183 (413)
T 3oy2_A 139 AMSKCWISDICN---YGCK-V------PINIVSHFVDTKTIY-------------------------DARKLVGLSEYND 183 (413)
T ss_dssp ESSTHHHHHHHH---TTCC-S------CEEECCCCCCCCCCT-------------------------THHHHTTCGGGTT
T ss_pred EcCHHHHHHHHH---cCCC-C------ceEEeCCCCCHHHHH-------------------------HHHHhcCCCcccC
Confidence 999999999986 5542 2 899999999988772 1356777775446
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchh----HHHHHHHHHHHCC--Cc-------eEEEeccC
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EK-------ARGVAKFN 467 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~-------i~~~~~~~ 467 (612)
.++|+|+||+.++||++.+++|+.++.+ ++++|+|+|.|+.. +++.++++..+++ ++ +...+..+
T Consensus 184 ~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~ 263 (413)
T 3oy2_A 184 DVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLT 263 (413)
T ss_dssp SEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCC
T ss_pred ceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCC
Confidence 7899999999999999999999999865 78999999998743 4477778777665 22 44445567
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCce---------------EE--Eeccccc
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT---------------GF--QMGSFSV 530 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~---------------G~--l~~~~~~ 530 (612)
.+.+..+|+.||++|+||.+|+||++++|||+||+|||+|+.||+.|++.++.+ |+ ++
T Consensus 264 ~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~----- 338 (413)
T 3oy2_A 264 DERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIE----- 338 (413)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEE-----
T ss_pred HHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceee-----
Confidence 888889999999999999999999999999999999999999999999999887 88 87
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH---HhcCCcHHHHHHHHHHHHHHHHcC
Q 007224 531 DCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 531 ~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~---~~~~sw~~~a~~~~~~y~~l~~~~ 591 (612)
++.|+++++++| +++++ ++.+.++++++. .+.|||+.++++|+++|++++...
T Consensus 339 -----~~~d~~~la~~i-~l~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 339 -----GIIDVDDLVEAF-TFFKD--EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp -----EECCHHHHHHHH-HHTTS--HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred -----CCCCHHHHHHHH-HHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 889999999999 99998 667777777664 478999999999999999998543
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=325.10 Aligned_cols=317 Identities=15% Similarity=0.108 Sum_probs=245.8
Q ss_pred CCCceEEEEecc--------ccCc--cccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeE
Q 007224 82 GVGLNILFVGTE--------VAPW--SKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEK 151 (612)
Q Consensus 82 ~~~MkIl~v~~~--------~~P~--~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (612)
|++|||++|+.. +.|+ ...||.+.++..|+++|+++||+|+++++.......
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~------------------ 62 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR------------------ 62 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS------------------
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC------------------
Confidence 567999999998 4221 246999999999999999999999999987432111
Q ss_pred EEEEEeeecCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcE
Q 007224 152 VRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDV 231 (612)
Q Consensus 152 ~~~~~~~~~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDv 231 (612)
++++++ ..+ ... .+.+.++.. +||
T Consensus 63 --------~~~~~~--~~~--------------------------~~~-------~l~~~l~~~------------~~D- 86 (342)
T 2iuy_A 63 --------PGLTVV--PAG--------------------------EPE-------EIERWLRTA------------DVD- 86 (342)
T ss_dssp --------TTEEEC--SCC--------------------------SHH-------HHHHHHHHC------------CCS-
T ss_pred --------Ccceec--cCC--------------------------cHH-------HHHHHHHhc------------CCC-
Confidence 122211 000 000 222333332 699
Q ss_pred EEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHH
Q 007224 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM 311 (612)
Q Consensus 232 vih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (612)
|||+|.+...+.. . ...++| ++++|+..... .
T Consensus 87 vi~~~~~~~~~~~---~-------~~~~~p-v~~~h~~~~~~--------------------------------~----- 118 (342)
T 2iuy_A 87 VVHDHSGGVIGPA---G-------LPPGTA-FISSHHFTTRP--------------------------------V----- 118 (342)
T ss_dssp EEEECSSSSSCST---T-------CCTTCE-EEEEECSSSBC--------------------------------S-----
T ss_pred EEEECCchhhHHH---H-------hhcCCC-EEEecCCCCCc--------------------------------c-----
Confidence 9999987654432 1 125889 99999654210 0
Q ss_pred HHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHH
Q 007224 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l 391 (612)
.+|.++++|+..++.+.+ ..++.+||||+|.+.|.+...
T Consensus 119 -----~~d~ii~~S~~~~~~~~~-------------~~~~~vi~ngvd~~~~~~~~~----------------------- 157 (342)
T 2iuy_A 119 -----NPVGCTYSSRAQRAHCGG-------------GDDAPVIPIPVDPARYRSAAD----------------------- 157 (342)
T ss_dssp -----CCTTEEESCHHHHHHTTC-------------CTTSCBCCCCBCGGGSCCSTT-----------------------
T ss_pred -----cceEEEEcCHHHHHHHhc-------------CCceEEEcCCCChhhcCcccc-----------------------
Confidence 189999999999998873 127899999999988876531
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007224 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 392 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~ 471 (612)
.. ++.++|+|+||+.++||++.+++|++++ +++|+|+|+|+ ..+.++++..++++++.+.+..+.+++
T Consensus 158 ----~~---~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~l 225 (342)
T 2iuy_A 158 ----QV---AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAW--EPEYFDEITRRYGSTVEPIGEVGGERR 225 (342)
T ss_dssp ----CC---CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCC--CHHHHHHHHHHHTTTEEECCCCCHHHH
T ss_pred ----cC---CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCcc--cHHHHHHHHHHhCCCEEEeccCCHHHH
Confidence 01 2446899999999999999999999998 89999999987 566777777776677888888888888
Q ss_pred HHHHHhcCEEEeCCC----------CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEecccccccCCCCCCC
Q 007224 472 HMIIAGADFILIPSR----------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 472 ~~~l~~adi~l~pS~----------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~~~~~~~~~v~~~d 539 (612)
..+|+.||++|+||. .|+||++++|||+||+|||+++.||+.|++.+ +.+|+++ ++ |
T Consensus 226 ~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~----------~~-d 294 (342)
T 2iuy_A 226 LDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGT----------DF-A 294 (342)
T ss_dssp HHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSS----------CC-C
T ss_pred HHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEc----------CC-C
Confidence 899999999999999 79999999999999999999999999999999 8999976 88 9
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcC
Q 007224 540 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 540 ~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~~ 591 (612)
+++++++|.++++ .+.+++.+.++|||+.++++|+++|++++...
T Consensus 295 ~~~l~~~i~~l~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 295 PDEARRTLAGLPA-------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA 339 (342)
T ss_dssp HHHHHHHHHTSCC-------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence 9999999999886 33344445689999999999999999998543
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=333.33 Aligned_cols=445 Identities=17% Similarity=0.171 Sum_probs=291.0
Q ss_pred EEEEeccccCccccccHHHHhhhhHHHHHhC-CCeEEEEeecCCc-ccc---cCCc--cE-------EEE---EEeCCee
Q 007224 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQ-YKD---AWDT--DV-------VIE---LKVGDKI 149 (612)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~La~~L~~~-Gh~V~vit~~~~~-~~~---~~~~--~~-------~~~---~~~~~~~ 149 (612)
|--+++|+.- |.||+=+++..-|+.+.+. |-+..+|.|.... ... .... .. .+. .....+-
T Consensus 30 lfE~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~G 107 (725)
T 3nb0_A 30 LFETATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQTMESRG 107 (725)
T ss_dssp EEEEETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHHHHHTTT
T ss_pred EEeeehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcCCcceeecCCCCchhhcchhHHHHHHHHHHHHCC
Confidence 3345666544 7999999999988887754 8899999985221 110 0000 00 000 0000111
Q ss_pred eEEEEEEeeecCceEEEE-eChhhhhh------hhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCC
Q 007224 150 EKVRFFHCHKRGVDRVFV-DHPWFLAK------VVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKY 222 (612)
Q Consensus 150 ~~~~~~~~~~~gv~~~~l-~~~~~~~~------~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 222 (612)
-.+++.+..++|-+++.+ |...++.+ -.|...+ +-.+..+. +-+...+|.+++.++++.+..++
T Consensus 108 ~~v~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~--i~s~~~yg-~~dd~~~F~y~~~avl~~l~~~~------ 178 (725)
T 3nb0_A 108 VHFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVG--IPSPENDF-ETNDAILLGYTVAWFLGEVAHLD------ 178 (725)
T ss_dssp CCEEEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHC--CCCCSSCH-HHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CeEEEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhC--cCCCCccc-chhHHHHHHHHHHHHHHHHHhcC------
Confidence 246677778889888766 43333321 1454333 21222222 44577899999999999887664
Q ss_pred CCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcc------cccCCcc-cccccCCCccccccccc
Q 007224 223 FSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAY------QGRFAFE-DFGLLNLPAQFKSSFDF 295 (612)
Q Consensus 223 ~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~------~~~~~~~-~~~~~~l~~~~~~~~~~ 295 (612)
.+.|| |+|+|||++++++.+++..+ .++++|||+|++.+ |+.++.. .+..++++.....
T Consensus 179 ---~~~pd-IiH~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~---- 244 (725)
T 3nb0_A 179 ---SQHAI-VAHFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGR---- 244 (725)
T ss_dssp ---CSEEE-EEEEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHH----
T ss_pred ---CCCCc-EEEeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhh----
Confidence 23589 99999999999999999764 69999999999853 3433211 1222222221100
Q ss_pred ccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCcccccccc
Q 007224 296 IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKY 375 (612)
Q Consensus 296 ~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~ 375 (612)
.-.....++++.++..||+|+|||+.+++++.. .++.+.+ .+||||+|++.|+|...
T Consensus 245 ------~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~--Ll~r~~d--------~iIpNGID~~~f~p~~~------- 301 (725)
T 3nb0_A 245 ------FGIYHRYCIERAAAHSADVFTTVSQITAFEAEH--LLKRKPD--------GILPNGLNVIKFQAFHE------- 301 (725)
T ss_dssp ------TTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHH--HTSSCCS--------EECCCCBCCCCCSSTTH-------
T ss_pred ------hchhHHHHHHHHHHHhCCEEEECCHHHHHHHHH--HhcCCCC--------EEEcCCccccccCcchh-------
Confidence 001135688999999999999999999999985 2344332 33999999999998521
Q ss_pred CcchhhcchHHHHHHHHHHh------CCCCC-CCCcEEEEEcCcc-cccCHHHHHHHHHhccc---------CCcEEEEE
Q 007224 376 DASTVMDAKPLLKEALQAEV------GLPVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK---------ENVQIIVL 438 (612)
Q Consensus 376 ~~~~~~~~~~~~k~~l~~~~------gl~~~-~~~~~il~iGrl~-~~Kg~d~ll~a~~~l~~---------~~~~lviv 438 (612)
....+...|..+++.+ |++.+ ++.++|..+||++ .+||+|.+++|+.++.. .-+-|+|+
T Consensus 302 ----~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~ 377 (725)
T 3nb0_A 302 ----FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVM 377 (725)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEC
T ss_pred ----hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEe
Confidence 1123445566665554 45544 3345566689999 79999999999999863 13667777
Q ss_pred eCCchhH----------HHHH-----------------------------------------------------------
Q 007224 439 GTGKKPM----------EKQL----------------------------------------------------------- 449 (612)
Q Consensus 439 G~g~~~~----------~~~l----------------------------------------------------------- 449 (612)
..+...+ .+++
T Consensus 378 p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~ 457 (725)
T 3nb0_A 378 PAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEG 457 (725)
T ss_dssp CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTT
T ss_pred CCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCC
Confidence 7653210 0000
Q ss_pred ----------------------HHHHHHC----CCceEEEeccC-hH------HHHHHHHhcCEEEeCCCCCCCcHHHHH
Q 007224 450 ----------------------EQLEILY----PEKARGVAKFN-IP------LAHMIIAGADFILIPSRFEPCGLIQLH 496 (612)
Q Consensus 450 ----------------------~~l~~~~----~~~i~~~~~~~-~~------~~~~~l~~adi~l~pS~~E~~gl~~lE 496 (612)
+++.... ..+++++..|. +. ....+|++||++|+||.+|+||++++|
T Consensus 458 ~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LE 537 (725)
T 3nb0_A 458 QLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAE 537 (725)
T ss_dssp CCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHH
T ss_pred CCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHH
Confidence 0000000 01244554442 22 356799999999999999999999999
Q ss_pred HHHcCCceEEcCCCCcccceecC-------ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh---hCHHHHHHHHHHH
Q 007224 497 AMRYGTVPIVASTGGLVDTVEEG-------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT---YGTQALAEMMKNG 566 (612)
Q Consensus 497 Ama~G~PvI~s~~gg~~e~v~~g-------~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~---~~~~~~~~~~~~~ 566 (612)
||+||+|||+|++||+.|+|.++ .+|+++.+. ++.|+++++++|.+++.. ..+..+.+|++++
T Consensus 538 AmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~r-------d~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~a 610 (725)
T 3nb0_A 538 CTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDR-------RFKAPDESVEQLVDYMEEFVKKTRRQRINQRNAT 610 (725)
T ss_dssp HHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECC-------SSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHcCCCEEEeCCCChhhhhhccccccCCCCceEEEeCC-------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999999876 369876111 355777777777776653 1355566676666
Q ss_pred --HHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 567 --MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 567 --~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
+++.|||+.++++|+++|+.++..
T Consensus 611 r~~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 611 EALSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp HHGGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 468999999999999999998753
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=298.86 Aligned_cols=355 Identities=12% Similarity=0.096 Sum_probs=228.5
Q ss_pred cCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeec
Q 007224 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
...+|||++++..|.|....||.. .+..|+.+|+++||+|+|+++......... ....
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~~~~~~---------------------~~~~ 100 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATPNPKDL---------------------QSFK 100 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCCCHHHH---------------------GGGT
T ss_pred CCCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCCChHHH---------------------Hhhh
Confidence 356899999999988842346664 688999999999999999998732100000 0000
Q ss_pred CceEEEEeChh-hhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCc
Q 007224 161 GVDRVFVDHPW-FLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH 239 (612)
Q Consensus 161 gv~~~~l~~~~-~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~ 239 (612)
+.....+.... +..+ +.. +.. . ....+.. .++| |||+|.|.
T Consensus 101 ~~~~~~~~~~~~~~~~---------i~~------~~~----------~---~~~~~~~---------~~~D-vv~a~~~~ 142 (413)
T 2x0d_A 101 SFKYVMPEEDKDFALQ---------IVP------FND----------R---YNRTIPV---------AKHD-IFIATAWW 142 (413)
T ss_dssp TSEECCTTCCCCCSEE---------EEE------CSC----------C---TTCCEEE---------CTTE-EEEECSHH
T ss_pred ccceeeccCCccccce---------eee------ccc----------c---ccccccC---------CCCC-EEEEehHH
Confidence 10000000000 0000 000 000 0 0000000 1589 88999887
Q ss_pred cchHHHHHH----HhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHH
Q 007224 240 TSLIPCYLK----TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI 315 (612)
Q Consensus 240 ~~~~~~~l~----~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 315 (612)
++.....+. ..+. ....+.++.+|+.... .++ ......+.+..+
T Consensus 143 ~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~-~~~---------------------------~~~~~~~~~~~~ 190 (413)
T 2x0d_A 143 TAYAAQRIVSWQSDTYG----IPPNKILYIIQDFEPG-FYQ---------------------------WSSQYVLAESTY 190 (413)
T ss_dssp HHHHHHHHHHHHHHHHT----CCCCCEEEEECSCGGG-GSC---------------------------SSHHHHHHHHTT
T ss_pred HHHHHHHhhhhhhhhcc----cccCcEEEEEeechhh-cCc---------------------------cChHHHHHHHHh
Confidence 766554442 1110 0245777777753220 000 000112223344
Q ss_pred HhcC--EEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHH
Q 007224 316 LESD--MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 316 ~~ad--~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~ 393 (612)
..++ .++++|+..++.+.+ +|.+.. ++.+|+||+|.+.|.+..
T Consensus 191 ~~~~~~~vi~~S~~~~~~l~~---~g~~~~------~~~~i~~g~d~~~~~~~~-------------------------- 235 (413)
T 2x0d_A 191 KYRGPQIAVFNSELLKQYFNN---KGYNFT------DEYFFQPKINTTLKNYIN-------------------------- 235 (413)
T ss_dssp SCCSCEEEEEESHHHHHHHHH---HTCCCS------EEEEECCCCCHHHHTTTT--------------------------
T ss_pred ccCCceEEEEcCHHHHHHHHH---cCCCCC------ceEEeCCCcCchhhcccc--------------------------
Confidence 4454 589999999999986 444322 688999999977554321
Q ss_pred HhCCCCCCCCcEEEEEcCc-ccccCHHHHHHHHHhccc--C---CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccC
Q 007224 394 EVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK--E---NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 394 ~~gl~~~~~~~~il~iGrl-~~~Kg~d~ll~a~~~l~~--~---~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~ 467 (612)
.+ .++.+.|+++||+ .+.||++.+++|+..+.+ + +++|+++|+|... .++ ....++.+.+..+
T Consensus 236 -~~---~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~-----~~l--~~~~~v~f~G~~~ 304 (413)
T 2x0d_A 236 -DK---RQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD-----IAL--GKGIHLNSLGKLT 304 (413)
T ss_dssp -SC---CCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC-----EEE--ETTEEEEEEESCC
T ss_pred -cc---cCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh-----hhc--CCcCcEEEcCCCC
Confidence 01 1234689999996 689999999999999865 4 3899999998742 011 1223577777778
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
.+++..+|+.||++++||..|+||++++||||||+|||++ .+|..|++.++.+|+++ ++.|+++++++|
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv----------~~~d~~~la~ai 373 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSL----------EQLNPENIAETL 373 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEE----------SSCSHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEe----------CCCCHHHHHHHH
Confidence 8889999999999999999999999999999999999995 56778999999999987 999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 548 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 548 ~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
.++++++. .+.+ .....++.|||+..+++ .++|+++.
T Consensus 374 ~~ll~~~~--~~~~-~~~~~~~~~~W~~~~~~-~~~~~~l~ 410 (413)
T 2x0d_A 374 VELCMSFN--NRDV-DKKESSNMMFYINEFNE-FSFIKEIE 410 (413)
T ss_dssp HHHHHHTC----------CCBSCGGGCCCC----TTHHHHH
T ss_pred HHHHcCHH--HHHH-hHHHHHHhCCHHHHHHH-HHHHHHHH
Confidence 99999843 2222 11123468999999887 77777765
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-29 Score=263.22 Aligned_cols=337 Identities=15% Similarity=0.015 Sum_probs=226.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++. + .||....+..|+++|+++||+|+++++......+.. ...|+++
T Consensus 7 mkIl~~~~---~---~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----------------------~~~g~~~ 58 (364)
T 1f0k_A 7 KRLMVMAG---G---TGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLV----------------------PKHGIEI 58 (364)
T ss_dssp CEEEEECC---S---SHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHG----------------------GGGTCEE
T ss_pred cEEEEEeC---C---CccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhc----------------------cccCCce
Confidence 89999973 2 578888899999999999999999998642111100 0124554
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.+..+.+... .... ......++......+.+.++.. +|| +||+|.....+..
T Consensus 59 ~~~~~~~~~~~--------~~~~------~~~~~~~~~~~~~~l~~~l~~~------------~pD-vv~~~~~~~~~~~ 111 (364)
T 1f0k_A 59 DFIRISGLRGK--------GIKA------LIAAPLRIFNAWRQARAIMKAY------------KPD-VVLGMGGYVSGPG 111 (364)
T ss_dssp EECCCCCCTTC--------CHHH------HHTCHHHHHHHHHHHHHHHHHH------------CCS-EEEECSSTTHHHH
T ss_pred EEecCCccCcC--------ccHH------HHHHHHHHHHHHHHHHHHHHhc------------CCC-EEEEeCCcCchHH
Confidence 44432211000 0000 0001112222233344444443 699 8899865433333
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
..+... .++|++++.|+... + ...+...+.+|.+++.
T Consensus 112 ~~~~~~-------~~~p~v~~~~~~~~-~-----------------------------------~~~~~~~~~~d~v~~~ 148 (364)
T 1f0k_A 112 GLAAWS-------LGIPVVLHEQNGIA-G-----------------------------------LTNKWLAKIATKVMQA 148 (364)
T ss_dssp HHHHHH-------TTCCEEEEECSSSC-C-----------------------------------HHHHHHTTTCSEEEES
T ss_pred HHHHHH-------cCCCEEEEecCCCC-c-----------------------------------HHHHHHHHhCCEEEec
Confidence 333333 47899999985321 0 0112335578999988
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
++.. .+ ++.+|+||+|...+.+.. .+++++++. +.+
T Consensus 149 ~~~~-----------~~--------~~~~i~n~v~~~~~~~~~-----------------------~~~~~~~~~--~~~ 184 (364)
T 1f0k_A 149 FPGA-----------FP--------NAEVVGNPVRTDVLALPL-----------------------PQQRLAGRE--GPV 184 (364)
T ss_dssp STTS-----------SS--------SCEECCCCCCHHHHTSCC-----------------------HHHHHTTCC--SSE
T ss_pred Chhh-----------cC--------CceEeCCccchhhcccch-----------------------hhhhcccCC--CCc
Confidence 7643 11 577999999987665431 134556643 335
Q ss_pred -EEEEEcCcccccCHHHHHHHHHhcccCCcE-EEEEeCCchhHHHHHHHHHHHCC-CceEEEeccChHHHHHHHHhcCEE
Q 007224 405 -VIGFIGRLEEQKGSDILAAAIPHFIKENVQ-IIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 405 -~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~-lvivG~g~~~~~~~l~~l~~~~~-~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
++++.|++.++||.+.+++|+.++.+ +++ ++++|+++ .+.++++..+++ .++.+.+.. +.+..+|+.||++
T Consensus 185 ~il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~---~~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~ 258 (364)
T 1f0k_A 185 RVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS---QQSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVV 258 (364)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC---HHHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEE
T ss_pred EEEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch---HHHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEE
Confidence 45556799999999999999999966 788 56788887 256666666655 356666544 4456799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc--------cceecCceEEEecccccccCCCCCCC--HHHHHHHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV--------DTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRAL 551 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~--------e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~l~~ll 551 (612)
|+||. |++++|||+||+|||+++.+|.. +++.++ .|+++ ++.| +++++++|.++
T Consensus 259 v~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~----------~~~d~~~~~la~~i~~l- 322 (364)
T 1f0k_A 259 VCRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKII----------EQPQLSVDAVANTLAGW- 322 (364)
T ss_dssp EECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEEC----------CGGGCCHHHHHHHHHTC-
T ss_pred EECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEe----------ccccCCHHHHHHHHHhc-
Confidence 99993 99999999999999999999875 355555 59987 8878 99999999999
Q ss_pred HhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHH
Q 007224 552 ATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+ ++.+.+|++++. .+.|+|+.++++|+++|++..
T Consensus 323 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 323 -S--RETLLTMAERARAASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp -C--HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC-
T ss_pred -C--HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 5 677777777764 468999999999999998653
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-30 Score=274.17 Aligned_cols=203 Identities=15% Similarity=0.112 Sum_probs=163.6
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHH
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
..+++..++.+|.++++|+..++.+.+ ++ ++.+||||+|.+.|.+....
T Consensus 169 ~~~~~~~~~~ad~vi~~S~~~~~~~~~---~~----------~i~vipngvd~~~f~~~~~~------------------ 217 (406)
T 2hy7_A 169 EREFDRVAPTLDVIALVSPAMAAEVVS---RD----------NVFHVGHGVDHNLDQLGDPS------------------ 217 (406)
T ss_dssp HHHHHHHGGGCSEEEESCGGGGGGCSC---ST----------TEEECCCCBCTTHHHHHCSC------------------
T ss_pred HHHHHHHHHhCCEEEEcCHHHHHHHHh---cC----------CEEEEcCCcChHhcCccccc------------------
Confidence 356677889999999999999888764 22 68999999998877543110
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccC
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~ 467 (612)
+ .++.++|+|+||+.++||+ ++++.+. .++++|+|+|+|+ ++++ ...+++.+.+..+
T Consensus 218 ----------~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~------~~~~--~l~~~V~f~G~~~ 274 (406)
T 2hy7_A 218 ----------P-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM------GRHP--GYGDNVIVYGEMK 274 (406)
T ss_dssp ----------S-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS------CCCT--TCCTTEEEECCCC
T ss_pred ----------c-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch------HHhc--CCCCCEEEcCCCC
Confidence 1 1233799999999999998 4444332 3789999999886 1111 1345688888888
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHH-------HcCCceEEcCCCCcccceecCceEEE-ecccccccCCCCCCC
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAM-------RYGTVPIVASTGGLVDTVEEGFTGFQ-MGSFSVDCEAVDPVD 539 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAm-------a~G~PvI~s~~gg~~e~v~~g~~G~l-~~~~~~~~~~v~~~d 539 (612)
.+++..+|+.||++|+||..|+||++++||| +||+|||+|+. +.++.+|++ + +++|
T Consensus 275 ~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v----------~~~d 338 (406)
T 2hy7_A 275 HAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGY----------TPGN 338 (406)
T ss_dssp HHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEE----------CTTC
T ss_pred HHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEe----------CCCC
Confidence 8888899999999999999999999999999 99999999987 667889998 7 9999
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHH--HHHHHH
Q 007224 540 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET--LLNLEV 589 (612)
Q Consensus 540 ~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~--y~~l~~ 589 (612)
+++++++|.++++++. . ...+.|||+.++++++++ |+++..
T Consensus 339 ~~~la~ai~~ll~~~~--------~-~~~~~~sw~~~a~~~~~~~~y~~~~~ 381 (406)
T 2hy7_A 339 ADSVIAAITQALEAPR--------V-RYRQCLNWSDTTDRVLDPRAYPETRL 381 (406)
T ss_dssp HHHHHHHHHHHHHCCC--------C-CCSCCCBHHHHHHHHHCGGGSGGGBS
T ss_pred HHHHHHHHHHHHhCcc--------h-hhhhcCCHHHHHHHHHHhhcccccCc
Confidence 9999999999999854 1 235789999999999999 887664
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-28 Score=269.00 Aligned_cols=363 Identities=15% Similarity=0.165 Sum_probs=266.1
Q ss_pred HHHHHHHHHHh-hHhhccCCCCCCCCCC----CCcEEEEecCCccchHHH-HHHHhhcCCCC-----C--CCceEEEEEe
Q 007224 201 FSLLCQAALEA-PRILNLNSNKYFSGPY----GEDVVFVANDWHTSLIPC-YLKTMYKPKGM-----Y--KSAKVVFCIH 267 (612)
Q Consensus 201 ~~~~~~~~~~~-~~~l~~~~~~~~~~~~----~pDvvih~h~~~~~~~~~-~l~~~~~~~~~-----~--~~~~vv~~iH 267 (612)
-.+|+.+.++. ++.+.... +.+ .|| +||+||||+++++. +++..+-..|. + ....++||+|
T Consensus 272 e~ff~~a~lq~ilr~~~~~~-----~~~~~l~~p~-viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~H 345 (796)
T 1l5w_A 272 QYFQCACSVADILRRHHLAG-----RKLHELADYE-VIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNH 345 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-----CCGGGHHHHE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHcC-----CChhhcCCcc-EEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEec
Confidence 36788888875 55432100 001 488 99999999999888 55443211111 0 3678999999
Q ss_pred cCccccc--CCcccccccCCCcccc----------cc-----------cccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 268 NIAYQGR--FAFEDFGLLNLPAQFK----------SS-----------FDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 268 ~~~~~~~--~~~~~~~~~~l~~~~~----------~~-----------~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
++.+++. |+...+..+- |.... .. +. ..+. ......++++.++..|+.|.+|
T Consensus 346 Tl~~egle~wp~~l~~~~l-pr~~~ii~~I~~~f~~~~~~~~~~~~~~~~-~~~i---~~~~~vnMa~lai~~S~~VNgV 420 (796)
T 1l5w_A 346 TLMPEALERWDVKLVKGLL-PRHMQIINEINTRFKTLVEKTWPGDEKVWA-KLAV---VHDKQVHMANLCVVGGFAVNGV 420 (796)
T ss_dssp CCSGGGSCEEEHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHSTTCHHHHH-HHCS---EETTEEEHHHHHHHHSSEEEES
T ss_pred CCcHhhhhcCCHHHHHHHh-HHHHHHHhccCHHHHHHHHHhcCCcHHHHh-hhhc---ccCCcccHHHHHHHhcCccccc
Confidence 9999885 6655442211 11110 00 00 0000 0113578999999999999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCcc----CCCCccccccccC----------------cch-----
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD----------------AST----- 379 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~----~p~~~~~~~~~~~----------------~~~----- 379 (612)
|+.+.+.+... .++ ..- -+.+.++..|.||||...| +|..++.+..+|+ .++
T Consensus 421 S~lH~e~ik~~-~f~-~~~-~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~ 497 (796)
T 1l5w_A 421 AALHSDLVVKD-LFP-EYH-QLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQ 497 (796)
T ss_dssp SHHHHHHHHHT-TSH-HHH-HHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHH
T ss_pred cHHHHHHHHhH-Hhh-HHH-HhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHH
Confidence 99999999752 232 111 1234589999999999999 7887777777776 443
Q ss_pred -hhcchHHHHHH----HHHHhCCCCCCCCcEEEEEcCcccccCHHH-HHHHHHhccc---------CCcEEEEEeCCchh
Q 007224 380 -VMDAKPLLKEA----LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKP 444 (612)
Q Consensus 380 -~~~~~~~~k~~----l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~-ll~a~~~l~~---------~~~~lvivG~g~~~ 444 (612)
+.+.|..+|.. +++++|++.+++.+.++++.|+.++||+++ ++..+.++.+ .+++|++.|++.+.
T Consensus 498 ~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~ 577 (796)
T 1l5w_A 498 QYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPG 577 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChh
Confidence 44677778888 599999999999999999999999999999 8888887755 47999999999865
Q ss_pred HHHH------HHHHHH------HCCC--ceEEEeccChHHHHHHHHhcCEEEeCCC--CCCCcHHHHHHHHcCCceEEcC
Q 007224 445 MEKQ------LEQLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 445 ~~~~------l~~l~~------~~~~--~i~~~~~~~~~~~~~~l~~adi~l~pS~--~E~~gl~~lEAma~G~PvI~s~ 508 (612)
++.. +.+++. ++++ ++.+...++..+++.++++||++++||+ +|+||+..+-+|.+|+++|++-
T Consensus 578 y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtL 657 (796)
T 1l5w_A 578 YYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTL 657 (796)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCc
Confidence 5554 777776 5666 7888889999999999999999999999 8999999999999999999999
Q ss_pred CCCcccceec--CceEEEecccccccCCCCCCCHHHHH---HHHHHHHHhhC-HHHHHHHHHHHHHhcCCcHHHHHHHHH
Q 007224 509 TGGLVDTVEE--GFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEE 582 (612)
Q Consensus 509 ~gg~~e~v~~--g~~G~l~~~~~~~~~~v~~~d~~~la---~~l~~ll~~~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~ 582 (612)
.|...|+.++ ..|||+|| . +++++. .+..+..+-+. .+.++++..+.+...|||... ..|.+
T Consensus 658 DGanvEi~e~vG~~NgF~FG----------~-~~~ev~~l~~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~ 725 (796)
T 1l5w_A 658 DGANVEIAEKVGEENIFIFG----------H-TVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDK-HAFDQ 725 (796)
T ss_dssp CTTHHHHHHHHCGGGSEECS----------C-CHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCT-TTTHH
T ss_pred CCeeeehhhccCCCcEEEec----------C-CHHHHHHHHHcccCHHHHhhcCHHHHHHHHHHHcCCCCCCcH-HHHHH
Confidence 9999998765 46999994 3 566655 33222222221 236778888888999999886 78999
Q ss_pred HHHHHHH
Q 007224 583 TLLNLEV 589 (612)
Q Consensus 583 ~y~~l~~ 589 (612)
+|++++.
T Consensus 726 Ly~~L~~ 732 (796)
T 1l5w_A 726 MLHSIGK 732 (796)
T ss_dssp HHHHTST
T ss_pred HHHHHhc
Confidence 9999863
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-28 Score=271.25 Aligned_cols=374 Identities=14% Similarity=0.122 Sum_probs=268.1
Q ss_pred HHHHHHHHHHh-hHhhccCCCCCCCCCCCCcEEEEecCCccchHHH-HHHHhhcCCCCC-------CCceEEEEEecCcc
Q 007224 201 FSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC-YLKTMYKPKGMY-------KSAKVVFCIHNIAY 271 (612)
Q Consensus 201 ~~~~~~~~~~~-~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~-~l~~~~~~~~~~-------~~~~vv~~iH~~~~ 271 (612)
-.+|+.+.++. ++.+..... .|..--.|| +||+||||+++++. +++..+-..|.- ....++||+|++.+
T Consensus 262 e~ff~~a~lq~ilr~~~~~~~-~l~~l~~p~-viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~ 339 (796)
T 2c4m_A 262 QYFFTSASLQAMIQDHLAHHK-DLSNFAEFH-SVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLT 339 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS-CSTTHHHHE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHhCC-ChhhcCCCe-EEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchH
Confidence 35788888875 554311000 000000478 99999999999888 554432111110 35689999999999
Q ss_pred ccc--CCccccccc---------CCCcccccccccccC------CCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHc
Q 007224 272 QGR--FAFEDFGLL---------NLPAQFKSSFDFIDG------YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS 334 (612)
Q Consensus 272 ~~~--~~~~~~~~~---------~l~~~~~~~~~~~~~------~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~ 334 (612)
++. |+...+..+ +++..+...+....+ ..........++++.++..|+.|.+||+.+.+.+..
T Consensus 340 egle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~ 419 (796)
T 2c4m_A 340 EALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKA 419 (796)
T ss_dssp TTSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred HHhhhCCHHHHHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhh
Confidence 986 665544221 111111110000000 000001135789999999999999999999999985
Q ss_pred cccCCccchhhhhccCeEEeeCCCccCcc----CCCCccccccccC-----------------cch------hhcchHHH
Q 007224 335 GEDKGVELDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD-----------------AST------VMDAKPLL 387 (612)
Q Consensus 335 ~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~----~p~~~~~~~~~~~-----------------~~~------~~~~~~~~ 387 (612)
. .++ ..- .+.+.++..|.||||...| +|..++.+...|+ .++ +.+.|..+
T Consensus 420 ~-~f~-~~~-~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~n 496 (796)
T 2c4m_A 420 E-TLA-DWY-ALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAAN 496 (796)
T ss_dssp T-TTH-HHH-HHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHH
T ss_pred h-hhh-hHH-HcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHH
Confidence 2 233 111 1234589999999999999 7887777777776 444 34677777
Q ss_pred HHH----HHHHhCCCCCCCCcEEEEEcCcccccCHHH-HHHHHHhccc---------CCcEEEEEeCCchhHHHH-----
Q 007224 388 KEA----LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ----- 448 (612)
Q Consensus 388 k~~----l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~-ll~a~~~l~~---------~~~~lvivG~g~~~~~~~----- 448 (612)
|.. ++++.|++.+++.+.++++.|+.++||+++ ++..+.++.+ .+++|++.|++.+.++..
T Consensus 497 K~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk 576 (796)
T 2c4m_A 497 KQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIK 576 (796)
T ss_dssp HHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHH
Confidence 888 599999999999999999999999999999 8888887753 379999999998665555
Q ss_pred -HHHHHH------HCCC--ceEEEeccChHHHHHHHHhcCEEEeCCC--CCCCcHHHHHHHHcCCceEEcCCCCccccee
Q 007224 449 -LEQLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 517 (612)
Q Consensus 449 -l~~l~~------~~~~--~i~~~~~~~~~~~~~~l~~adi~l~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 517 (612)
+.+++. ++++ ++.+...++..+++.++++||++++||+ +|+||+..+-+|.+|+++|++-.|...|+.+
T Consensus 577 ~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e 656 (796)
T 2c4m_A 577 LINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVD 656 (796)
T ss_dssp HHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHH
T ss_pred HHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhh
Confidence 777776 6777 8899999999999999999999999999 8999999999999999999999999998876
Q ss_pred c--CceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 518 E--GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 518 ~--g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+ ..|||+||. ...+++++..+ .+..+-+. .+.++++..+.+...|||... ..|.++|++++.
T Consensus 657 ~vG~~NgF~FG~--------~~~ev~~l~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 657 SVGEENAYIFGA--------RVEELPALRES-YKPYELYETVPGLKRALDALDNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp HHCGGGSEEESC--------CTTTHHHHHHT-CCHHHHHHHSTTHHHHHHTTTSSSSCCTTC-CHHHHHHHHHHS
T ss_pred hcCCCcEEEecC--------chhhHHHHHHh-hChHHHhhcCHHHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHh
Confidence 5 469999952 23567777665 33333221 135677777778899999987 789999999973
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-27 Score=258.05 Aligned_cols=293 Identities=15% Similarity=0.136 Sum_probs=206.7
Q ss_pred CcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCccc-ccccCCCcccccccccccCCCCCcCCcc
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+| |||+|||+..+++.+++... .++|+++++|.. |+... +..+ | .
T Consensus 124 ~D-iV~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~p-----fp~~~~~~~l--p--------------------~ 169 (482)
T 1uqt_A 124 DD-IIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIP-----FPTPEIFNAL--P--------------------T 169 (482)
T ss_dssp TC-EEEEESGGGTTHHHHHHHTT------CCSCEEEECCSC-----CCCHHHHTTS--T--------------------T
T ss_pred CC-EEEEECchHHHHHHHHHHhC------CCCcEEEEEcCC-----CCCHHHHhhC--c--------------------c
Confidence 58 99999999999999888753 589999999953 22110 0000 0 1
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccc--cCCccc------hhhhhccCeEEeeCCCccCccCCCCccccccccCcch
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGE--DKGVEL------DNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~------~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
...+...+..+|.+.+.+..+.+.+.+.. ..+.+. ...-+..++.+||||+|++.|.+....
T Consensus 170 ~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~---------- 239 (482)
T 1uqt_A 170 YDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAG---------- 239 (482)
T ss_dssp HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHS----------
T ss_pred HHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcC----------
Confidence 12233445678888888877666654210 011100 000012478999999999887542100
Q ss_pred hhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCc----h---hHH
Q 007224 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PME 446 (612)
Q Consensus 380 ~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~----~~~lvivG~g~----~---~~~ 446 (612)
..... .+.++++++ ++++|+++||+++.||++.+++|++++.+ + +++|+++|.+. + .++
T Consensus 240 --~~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~ 311 (482)
T 1uqt_A 240 --PLPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIR 311 (482)
T ss_dssp --CCCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHH
T ss_pred --cchHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHH
Confidence 00011 356777776 45799999999999999999999999854 3 47899999632 1 245
Q ss_pred HHHHHHHHHC----C----CceEEE-eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCC-----ceEEcCCCCc
Q 007224 447 KQLEQLEILY----P----EKARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGL 512 (612)
Q Consensus 447 ~~l~~l~~~~----~----~~i~~~-~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~ 512 (612)
+++++++.+. + ..+.++ ...+.+++..+|+.||++|+||..||||++++|||+||+ |+|+|+.+|.
T Consensus 312 ~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~ 391 (482)
T 1uqt_A 312 HQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA 391 (482)
T ss_dssp HHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG
T ss_pred HHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC
Confidence 5666665432 1 125544 445788888999999999999999999999999999997 8999998888
Q ss_pred ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHH
Q 007224 513 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 513 ~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l 587 (612)
.+.+. +|+++ +|.|+++++++|.++++++ ++.+.++.+++. .+.|||+..++++++.|+++
T Consensus 392 ~~~l~---~g~lv----------~p~d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 392 ANELT---SALIV----------NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp GGTCT---TSEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHhC---CeEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 88873 68987 9999999999999999862 334444444442 35699999999999999876
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-27 Score=248.20 Aligned_cols=224 Identities=14% Similarity=0.080 Sum_probs=168.9
Q ss_pred HHHHHH-HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCC-CccCccCCCCccccccccCcchhhcchHHH
Q 007224 310 WMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 310 ~~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
+.+..+ +.+|.++++|+..++.+.+ +|++.+ ++.+|+|| +|...+.+....
T Consensus 142 ~~~~~~~~~~d~ii~~s~~~~~~~~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~~------------------ 194 (375)
T 3beo_A 142 MNRQLTGVMADLHFSPTAKSATNLQK---ENKDES------RIFITGNTAIDALKTTVKETY------------------ 194 (375)
T ss_dssp HHHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC------------------
T ss_pred hhhhHHhhhhheeeCCCHHHHHHHHH---cCCCcc------cEEEECChhHhhhhhhhhhhh------------------
Confidence 344434 3599999999999999876 576654 89999999 887665443100
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccc-cCHHHHHHHHHhccc--CCcEEEEEeCCc-hhHHHHHHHHHHHCCCceEEE
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGV 463 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~-Kg~d~ll~a~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~~~i~~~ 463 (612)
+..+++++ + ++..+++++||+.++ ||++.+++|+.++.+ +++++++ |.|+ ..+.+.++++... ..++.+.
T Consensus 195 ~~~~~~~~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~-~~~v~~~ 268 (375)
T 3beo_A 195 SHPVLEKL--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGD-YGRIHLI 268 (375)
T ss_dssp CCHHHHTT--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTT-CTTEEEE
T ss_pred hHHHHHhc--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhc-cCCEEEe
Confidence 11233333 2 234578899999876 999999999999865 6888655 5554 3345566655322 2357776
Q ss_pred eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCCCCCHHH
Q 007224 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 464 ~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 542 (612)
+......+..+|+.||++|+|| |.+++|||+||+|||+++. ||..|++.++ +|+++ ++ |+++
T Consensus 269 g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v----------~~-d~~~ 331 (375)
T 3beo_A 269 EPLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLA----------GT-DEET 331 (375)
T ss_dssp CCCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEEC----------CS-CHHH
T ss_pred CCCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEc----------CC-CHHH
Confidence 6666667788999999999999 7789999999999999964 9999999888 99986 65 9999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHH
Q 007224 543 VSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 543 la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~ 585 (612)
++++|.+++++ ++.+.+|++++ ..+.|+|+.+++.++++++
T Consensus 332 la~~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 332 IFSLADELLSD--KEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHHHHHHHC--HHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhC--hHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 99999999998 67777777655 2467999999999888763
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-27 Score=249.31 Aligned_cols=281 Identities=15% Similarity=0.083 Sum_probs=196.0
Q ss_pred CCcEEEEecCC-ccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDW-HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~-~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+|| +||+|+. ...+...++... .++|++++.|+......+ .+ .
T Consensus 86 ~pD-vv~~~~~~~~~~~~~~~a~~-------~~ip~v~~~~~~~~~~~~-------------------------~~---~ 129 (384)
T 1vgv_A 86 KPD-VVLVHGDTTTTLATSLAAFY-------QRIPVGHVEAGLRTGDLY-------------------------SP---W 129 (384)
T ss_dssp CCS-EEEEETTCHHHHHHHHHHHT-------TTCCEEEESCCCCCSCTT-------------------------SS---T
T ss_pred CCC-EEEEeCCchHHHHHHHHHHH-------HCCCEEEEeccccccccc-------------------------CC---C
Confidence 699 8999865 333333333322 589999988854210000 00 0
Q ss_pred chhHHHHH-HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcch
Q 007224 307 KINWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 307 ~~~~~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
...+.+.. .+.+|.++++|+..++.+.+ +|++.+ ++.+++||+ |...+.+... ...
T Consensus 130 ~~~~~~~~~~~~~d~ii~~s~~~~~~l~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~-------------~~~ 187 (384)
T 1vgv_A 130 PEEANRTLTGHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQV-------------MSS 187 (384)
T ss_dssp THHHHHHHHHTTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHT-------------TTC
T ss_pred chHhhHHHHHhhccEEEcCcHHHHHHHHH---cCCChh------hEEEeCChHHHHHHhhhhcc-------------ccc
Confidence 11223333 34599999999999999875 677654 799999995 4322211000 000
Q ss_pred HHHHHHHHHHhC-CCCCCCCcEEEEEcCcccc-cCHHHHHHHHHhccc--CCcEEEEE-eCCchhHHHHHHHHHHHCCCc
Q 007224 385 PLLKEALQAEVG-LPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEK 459 (612)
Q Consensus 385 ~~~k~~l~~~~g-l~~~~~~~~il~iGrl~~~-Kg~d~ll~a~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~ 459 (612)
...+..+++++| ++.+ +..+++++||+.++ ||++.+++|+.++.+ ++++|+++ |.+ +.+.+.++++.... .+
T Consensus 188 ~~~~~~~~~~~~~~~~~-~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~-~~~~~~l~~~~~~~-~~ 264 (384)
T 1vgv_A 188 DKLRSELAANYPFIDPD-KKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLN-PNVREPVNRILGHV-KN 264 (384)
T ss_dssp HHHHHHHHTTCTTCCTT-SEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHHTTC-TT
T ss_pred hhhhHHHHHhccccCCC-CCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCC-HHHHHHHHHHhhcC-CC
Confidence 001235677777 6422 33578899999876 999999999999865 68999886 433 23566666664332 35
Q ss_pred eEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCCCC
Q 007224 460 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 460 i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~ 538 (612)
+.+.+....+.+..+|+.||++|+|| |.+++|||+||+|||+++. ||..|++.+| +|+++ ++
T Consensus 265 v~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv----------~~- 327 (384)
T 1vgv_A 265 VILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLV----------GT- 327 (384)
T ss_dssp EEEECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEE----------CS-
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEe----------CC-
Confidence 77665445567778999999999999 4458999999999999986 9999999888 99987 66
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHH
Q 007224 539 DVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 539 d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
|+++++++|.+++++ ++.+.+|++++ ..+.|+|+.+++.++++|.+++
T Consensus 328 d~~~la~~i~~ll~d--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 377 (384)
T 1vgv_A 328 DKQRIVEEVTRLLKD--ENEYQAMSRAHNPYGDGQACSRILEALKNNRISLG 377 (384)
T ss_dssp SHHHHHHHHHHHHHC--HHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC-
T ss_pred CHHHHHHHHHHHHhC--hHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhhc
Confidence 999999999999998 77778887665 3467999999999998887665
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-27 Score=262.53 Aligned_cols=212 Identities=14% Similarity=0.085 Sum_probs=165.9
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhC
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 396 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g 396 (612)
.+|.++++|+...+ ++ .++.+|||..+.....+... ....++++|
T Consensus 328 ~~d~~i~~s~~~~~-------~~---------~~i~~ipn~~~~~~~~~~~~-------------------~~~~r~~~~ 372 (568)
T 2vsy_A 328 LGDAFALPPALEPF-------YS---------EHVLRLQGAFQPSDTSRVVA-------------------EPPSRTQCG 372 (568)
T ss_dssp EECTTTSCTTTGGG-------CS---------SEEEECSSCSCCCCTTCCCC-------------------CCCCTGGGT
T ss_pred EECCCcCCcccccC-------Cc---------ceeEcCCCcCCCCCCCCCCC-------------------CCCCccccC
Confidence 47888888875432 22 17899999543322111100 112366778
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEe-CCchhHHHHHHHHHHHCC---CceEEEeccChHH
Q 007224 397 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG-TGKKPMEKQLEQLEILYP---EKARGVAKFNIPL 470 (612)
Q Consensus 397 l~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG-~g~~~~~~~l~~l~~~~~---~~i~~~~~~~~~~ 470 (612)
++.+ .+++++||+.+ ||++.+++++.++.+ ++++|+|+| +|+ ..+.++++..+++ +++.+.+..+.+.
T Consensus 373 ~~~~---~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~--~~~~l~~~~~~~~l~~~~v~~~g~~~~~~ 446 (568)
T 2vsy_A 373 LPEQ---GVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE--ADARLRAFAHAQGVDAQRLVFMPKLPHPQ 446 (568)
T ss_dssp CCTT---SCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT--HHHHHHHHHHHTTCCGGGEEEECCCCHHH
T ss_pred CCCC---CEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH--HHHHHHHHHHHcCCChhHEEeeCCCCHHH
Confidence 8632 35669999999 999999999999855 799999999 666 6677877777764 4588887777778
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEE-------cCCC-------CcccceecCceEEEecccccccCCCC
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV-------ASTG-------GLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~-------s~~g-------g~~e~v~~g~~G~l~~~~~~~~~~v~ 536 (612)
+..+|+.||++|+||.+ +||++++|||+||+|||+ |+.| |+.|+|.
T Consensus 447 ~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~------------------- 506 (568)
T 2vsy_A 447 YLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNV------------------- 506 (568)
T ss_dssp HHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBC-------------------
T ss_pred HHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhc-------------------
Confidence 88899999999999999 999999999999999999 9999 8888763
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---H--HhcCCcHHHHHHHHHHHHHHHHcCC
Q 007224 537 PVDVAAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLEVAGS 592 (612)
Q Consensus 537 ~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~--~~~~sw~~~a~~~~~~y~~l~~~~~ 592 (612)
.|+++++++|.+++++ ++.+.+|++++ + .+.|||+.++++++++|++++....
T Consensus 507 -~~~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~ 564 (568)
T 2vsy_A 507 -ADDAAFVAKAVALASD--PAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRHG 564 (568)
T ss_dssp -SSHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred -CCHHHHHHHHHHHhcC--HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2899999999999998 66666776665 3 3779999999999999999986543
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=216.30 Aligned_cols=184 Identities=30% Similarity=0.511 Sum_probs=156.3
Q ss_pred EeeCCCccCccC--CCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcc-cccCHHHHHHHHHhcc
Q 007224 353 GIVNGMDVQEWN--PLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFI 429 (612)
Q Consensus 353 vI~Ngvd~~~~~--p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~-~~Kg~d~ll~a~~~l~ 429 (612)
+||||+|.+.|. |... .....+..+++++|++ +.++|+|+||+. +.||++.+++++..+.
T Consensus 1 gipngvd~~~f~~~~~~~--------------~~~~~~~~~r~~~~~~---~~~~i~~~G~~~~~~K~~~~li~a~~~l~ 63 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTG--------------SRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILS 63 (200)
T ss_dssp ----CCCTTTSSGGGSCS--------------CHHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHT
T ss_pred CCCCccChhhcccccccc--------------chhhHHHHHHHHcCCC---CCCEEEEeeccccccCCHHHHHHHHHHHH
Confidence 489999999998 7531 1122356789999987 346999999999 9999999999999995
Q ss_pred --c--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEE-EeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCce
Q 007224 430 --K--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVP 504 (612)
Q Consensus 430 --~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~-~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~Pv 504 (612)
+ ++++|+|+|.+.+.+.+.++++..+++ ++.+ .+..+.+.+..+|+.||++|+||..|+||++++|||+||+||
T Consensus 64 ~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~Pv 142 (200)
T 2bfw_A 64 SKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIP 142 (200)
T ss_dssp TSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEE
T ss_pred hhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCE
Confidence 3 689999999988667788888888887 6888 777788888899999999999999999999999999999999
Q ss_pred EEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH-hhCHHHHHHHHHHHH
Q 007224 505 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGTQALAEMMKNGM 567 (612)
Q Consensus 505 I~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~-~~~~~~~~~~~~~~~ 567 (612)
|+++.+|+.|++ ++.+|+++ ++.|+++++++|.++++ + ++.+.+|++++.
T Consensus 143 I~~~~~~~~e~~-~~~~g~~~----------~~~~~~~l~~~i~~l~~~~--~~~~~~~~~~a~ 193 (200)
T 2bfw_A 143 IASAVGGLRDII-TNETGILV----------KAGDPGELANAILKALELS--RSDLSKFRENCK 193 (200)
T ss_dssp EEESCHHHHHHC-CTTTCEEE----------CTTCHHHHHHHHHHHHHCC--HHHHHHHHHHHH
T ss_pred EEeCCCChHHHc-CCCceEEe----------cCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHH
Confidence 999999999999 89999988 88999999999999999 8 677777777663
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-24 Score=234.96 Aligned_cols=294 Identities=14% Similarity=0.164 Sum_probs=213.3
Q ss_pred CcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccc-cccCCCcccccccccccCCCCCcCCcc
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
.| +|..||+|..++|.+++... .+.++.|.+|.. ||...+ .. +|.. .
T Consensus 150 ~D-~VwVhDYhL~llp~~lR~~~------~~~~igfFlHiP-----fPs~e~f~~--Lp~~------------------~ 197 (496)
T 3t5t_A 150 DP-VYLVHDYQLVGVPALLREQR------PDAPILLFVHIP-----WPSADYWRI--LPKE------------------I 197 (496)
T ss_dssp SC-EEEEESGGGTTHHHHHHHHC------TTSCEEEECCSC-----CCCHHHHTT--SCHH------------------H
T ss_pred CC-EEEEeCccHhHHHHHHHhhC------CCCeEEEEEcCC-----CCCHHHHhh--CcHh------------------H
Confidence 46 99999999999999999875 689999999942 332211 11 1100 1
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccc--cC-Cccchh-------hhhccCeEEeeCCCccCccCCCCccccccccCc
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGE--DK-GVELDN-------IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 377 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~-g~~~~~-------~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~ 377 (612)
...+-.++..+|.|.+.++.+++.+.+.. .. |.+.+. .-+..++.++|+|||++.|.+....
T Consensus 198 r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~-------- 269 (496)
T 3t5t_A 198 RTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ-------- 269 (496)
T ss_dssp HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC--------
T ss_pred HHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH--------
Confidence 24455678899999999999988755411 11 322110 0122478899999999999765320
Q ss_pred chhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C---CcEEEEEeCC-----c--hhH
Q 007224 378 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E---NVQIIVLGTG-----K--KPM 445 (612)
Q Consensus 378 ~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~---~~~lvivG~g-----~--~~~ 445 (612)
..+.++++++ ++++|+++||+++.||++.+++|+ ++.+ + ++.|+++|.. + ..+
T Consensus 270 ---------~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l 334 (496)
T 3t5t_A 270 ---------LPEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADY 334 (496)
T ss_dssp ---------CCTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHH
T ss_pred ---------HHHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHH
Confidence 0145677776 458999999999999999999999 7754 4 3678888742 1 234
Q ss_pred HHHHHHHHHHCC----C-ceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcC---CceEEcCCCCccccee
Q 007224 446 EKQLEQLEILYP----E-KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG---TVPIVASTGGLVDTVE 517 (612)
Q Consensus 446 ~~~l~~l~~~~~----~-~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G---~PvI~s~~gg~~e~v~ 517 (612)
++++++++.+.+ . .+.+.+..+.+++..+|+.||++++||..||||++.+|||+|| .|+|+|..+|..+.+.
T Consensus 335 ~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~ 414 (496)
T 3t5t_A 335 VHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG 414 (496)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG
T ss_pred HHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC
Confidence 566666655432 1 3777766778888899999999999999999999999999997 8999999999888884
Q ss_pred cCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 518 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 518 ~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
.+|+++ +|.|+++++++|.++++++ .++++++.++. ....+++..-++.+++-+......
T Consensus 415 --~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 415 --EYCRSV----------NPFDLVEQAEAISAALAAG-PRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp --GGSEEE----------CTTBHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcccc
Confidence 368987 9999999999999999974 23333333333 357899999999998888877544
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=249.01 Aligned_cols=341 Identities=17% Similarity=0.166 Sum_probs=249.9
Q ss_pred CCcEEEEecCCccchHHH-HHHHhhcCCCCC-------CCceEEEEEecCccccc--CCcccccccCCCc----------
Q 007224 228 GEDVVFVANDWHTSLIPC-YLKTMYKPKGMY-------KSAKVVFCIHNIAYQGR--FAFEDFGLLNLPA---------- 287 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~-~l~~~~~~~~~~-------~~~~vv~~iH~~~~~~~--~~~~~~~~~~l~~---------- 287 (612)
.|| +||+||||+++++. +++..+-..+.- ....++||+|++.++|. |+...+..+- |.
T Consensus 320 ~p~-viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lL-Pr~~~ii~~in~ 397 (824)
T 2gj4_A 320 DKV-AIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLL-PRHLQIIYEINQ 397 (824)
T ss_dssp HHE-EEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHC-HHHHHHHHHHHH
T ss_pred CCc-EEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhC-chHHHHHHHHHH
Confidence 478 99999999999888 554433211110 23349999999999998 7766553311 11
Q ss_pred cccc-----------ccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeC
Q 007224 288 QFKS-----------SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356 (612)
Q Consensus 288 ~~~~-----------~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N 356 (612)
.|.. .+......... .....++++.++..|+.|.+||+.+.+.+.. ..++- .-. ..+.++..|.|
T Consensus 398 ~f~~~~~~~~~~~~~~~~~~~~i~~~-~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~-~~f~~-~~~-~~p~k~~~iTN 473 (824)
T 2gj4_A 398 RFLNRVAAAFPGDVDRLRRMSLVEEG-AVKRINMAHLCIAGSHAVNGVARIHSEILKK-TIFKD-FYE-LEPHKFQNKTN 473 (824)
T ss_dssp HHHHHHHHHSTTCHHHHHHHCSEECS-SSCEEEHHHHHHHTCSCEEESSHHHHHHHHH-TTTHH-HHH-HCGGGEEECCC
T ss_pred HHHHHHHHHcCCcHHHHHhhhhhhhc-CCCcccHHHHHHHhcCceeeEcHHHHHHHhh-HHhHH-HHH-cChhhcccccC
Confidence 1100 00000000000 1246789999999999999999999999974 22331 111 22458999999
Q ss_pred CCccCcc----CCCCccccccc-----------------cCc-chhh----cchHHHHHH----HHHHhCCCCCCCCcEE
Q 007224 357 GMDVQEW----NPLTDKYIGVK-----------------YDA-STVM----DAKPLLKEA----LQAEVGLPVDRNIPVI 406 (612)
Q Consensus 357 gvd~~~~----~p~~~~~~~~~-----------------~~~-~~~~----~~~~~~k~~----l~~~~gl~~~~~~~~i 406 (612)
|||...| +|..++.|..+ |.. .++. +.|..+|.+ ++++.|++.+++.+.+
T Consensus 474 GI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~ 553 (824)
T 2gj4_A 474 GITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFD 553 (824)
T ss_dssp CBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEE
T ss_pred CcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceE
Confidence 9999999 77766666544 665 3332 456667776 8999999999999999
Q ss_pred EEEcCcccccCHHHH-HHHHHhcc---c-C-----CcEEEEEeCCchhHHHH------HHHHHHHC------CC--ceEE
Q 007224 407 GFIGRLEEQKGSDIL-AAAIPHFI---K-E-----NVQIIVLGTGKKPMEKQ------LEQLEILY------PE--KARG 462 (612)
Q Consensus 407 l~iGrl~~~Kg~d~l-l~a~~~l~---~-~-----~~~lvivG~g~~~~~~~------l~~l~~~~------~~--~i~~ 462 (612)
+++.|+.++||++++ +..+.++. + + +++|++.|++.+.++.. +.+++..+ ++ ++.+
T Consensus 554 g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvF 633 (824)
T 2gj4_A 554 VQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIF 633 (824)
T ss_dssp EEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEE
T ss_pred eeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEE
Confidence 999999999999998 88888774 2 2 67999999998655554 77777654 45 7888
Q ss_pred EeccChHHHHHHHHhcCEEEeCCC--CCCCcHHHHHHHHcCCceEEcCCCCccccee--cCceEEEecccccccCCCCCC
Q 007224 463 VAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~adi~l~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~l~~~~~~~~~~v~~~ 538 (612)
...++..+++.++++||++++||+ +|+||+..+-||.+|++.|++-.|...|+.+ .+.|||+|| .
T Consensus 634 l~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG----------~- 702 (824)
T 2gj4_A 634 LENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFG----------M- 702 (824)
T ss_dssp ETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS----------C-
T ss_pred ECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeC----------C-
Confidence 889999999999999999999999 8999999999999999999999898888765 356899984 2
Q ss_pred CHHHHHHHHH-------HHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 539 DVAAVSTTVR-------RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 539 d~~~la~~l~-------~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
.++++ ..+. .+.+. .+.++++..+.+...|||... ..|.++|++++.
T Consensus 703 ~~~ev-~~l~~~~~~a~~~Y~~--~~~l~~v~d~i~~g~fs~~~~-~~y~~ly~~l~~ 756 (824)
T 2gj4_A 703 RVEDV-DRLDQRGYNAQEYYDR--IPELRQIIEQLSSGFFSPKQP-DLFKDIVNMLMH 756 (824)
T ss_dssp CHHHH-HHHHHHCCCHHHHHHH--CHHHHHHHHHHHHTTTCTTST-TTTHHHHHHHHH
T ss_pred cHHHH-HHHHHcCCCHHHHhcC--CHHHHHHHHHHHhCCCCCCCh-HHHHHHHHHHHc
Confidence 25555 4432 22222 356777777778899999988 889999999874
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=200.02 Aligned_cols=159 Identities=16% Similarity=0.171 Sum_probs=132.2
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
++|+|+||+.++||++.+++|+.++.+ ++++|+|+|+|+ ..+.++++..+++.++.. +..+.+.+..+|+.||++|
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v 79 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP--DEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYV 79 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST--THHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEE
T ss_pred eEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc--cHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEE
Confidence 689999999999999999999999965 699999999987 467788888877765666 6667788889999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCC-ceEE-cCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 483 IPSRFEPCGLIQLHAMRYGT-VPIV-ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~-PvI~-s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
+||.+|+||++++|||+||+ |||+ ++.|+..|++.++.+ ++ ++.|+++++++|.+++++ ++.+.
T Consensus 80 ~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~----------~~~~~~~l~~~i~~l~~~--~~~~~ 145 (166)
T 3qhp_A 80 HAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LF----------EPNNAKDLSAKIDWWLEN--KLERE 145 (166)
T ss_dssp ECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EE----------CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred ECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EE----------cCCCHHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999998 9999 568899999988765 33 889999999999999998 66677
Q ss_pred HHHHHHH--HhcCCcHHHHHH
Q 007224 561 EMMKNGM--AQDLSWKGPAKK 579 (612)
Q Consensus 561 ~~~~~~~--~~~~sw~~~a~~ 579 (612)
++++++. .++|||+.++++
T Consensus 146 ~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 146 RMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHCChhhhhcC
Confidence 7776663 488999998764
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.6e-22 Score=209.24 Aligned_cols=219 Identities=13% Similarity=0.042 Sum_probs=162.0
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~ 393 (612)
...+|.++++|+..++.+.+ +|++.+ ++.+++|++ |...+.+. +..+++
T Consensus 144 ~~~~~~~~~~s~~~~~~l~~---~g~~~~------ki~vi~n~~~d~~~~~~~---------------------~~~~~~ 193 (376)
T 1v4v_A 144 DVLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDAVLLAAK---------------------LGRLPE 193 (376)
T ss_dssp HHHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHHHHHHHH---------------------HCCCCT
T ss_pred HHHhceeeCCCHHHHHHHHH---cCCCcc------eEEEECCchHHHHhhhhh---------------------hhHHHH
Confidence 45699999999999999986 577654 789999965 42211100 001111
Q ss_pred HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEE-eCCchhHHHHHHHHHHHCCCceEEEeccChHH
Q 007224 394 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 394 ~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~ 470 (612)
++ + ++.++++++||+..+||++.+++|+.++.+ ++++++++ |++. ...+.++++... ..++.+.+......
T Consensus 194 ~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~-~~~v~~~g~~g~~~ 267 (376)
T 1v4v_A 194 GL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKG-VRNFVLLDPLEYGS 267 (376)
T ss_dssp TC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTT-CTTEEEECCCCHHH
T ss_pred hc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhcc-CCCEEEECCCCHHH
Confidence 11 1 234567789999989999999999999865 68998886 6554 345666666433 23576665444456
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHH
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ 549 (612)
+..+|+.||++|.|| | |+ ++|||+||+|+|++ +.+|..+++.++ +|+++ + .|+++++++|.+
T Consensus 268 ~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv----------~-~d~~~la~~i~~ 330 (376)
T 1v4v_A 268 MAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLA----------G-TDPEGVYRVVKG 330 (376)
T ss_dssp HHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEEC----------C-SCHHHHHHHHHH
T ss_pred HHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEEC----------C-CCHHHHHHHHHH
Confidence 778999999999999 2 44 88999999999998 578888987655 78875 4 599999999999
Q ss_pred HHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 550 ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
++++ ++.+++|+++ .+.|.|...++++.+++++++..
T Consensus 331 ll~d--~~~~~~~~~~--~~~~~~~~~~~~i~~~i~~~~~~ 367 (376)
T 1v4v_A 331 LLEN--PEELSRMRKA--KNPYGDGKAGLMVARGVAWRLGL 367 (376)
T ss_dssp HHTC--HHHHHHHHHS--CCSSCCSCHHHHHHHHHHHHTTS
T ss_pred HHhC--hHhhhhhccc--CCCCCCChHHHHHHHHHHHHhcc
Confidence 9997 7777888753 46788888999999999988743
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.3e-21 Score=180.47 Aligned_cols=142 Identities=15% Similarity=0.199 Sum_probs=124.8
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCch--hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 401 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 401 ~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~--~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
+++++|+|+||+.+.||++.+++++.++ ++++|+|+|.+.. .+++.++++....++++.+.+..+.+++..+|+.|
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 98 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 98 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 4568999999999999999999999999 7899999999873 34444443333455678888888888889999999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 555 (612)
|++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++ +.|+++++++|.++++++.
T Consensus 99 di~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-----------~~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 99 KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-----------NADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-----------CSCHHHHHHHHHHHHHCTT
T ss_pred CEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-----------CCCHHHHHHHHHHHHhCHH
Confidence 99999999999999999999999999999999999999999999963 6799999999999999843
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-20 Score=195.93 Aligned_cols=187 Identities=13% Similarity=0.050 Sum_probs=138.6
Q ss_pred HHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHH
Q 007224 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~ 389 (612)
+++..+..+|.++++|+..++.+.+ +|++ ++.+|+|+. |.+...+
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~l~~---~g~~--------ki~vi~n~~----f~~~~~~-------------------- 190 (374)
T 2xci_A 146 IEKILSKKFDLIIMRTQEDVEKFKT---FGAK--------RVFSCGNLK----FICQKGK-------------------- 190 (374)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHT---TTCC--------SEEECCCGG----GCCCCCS--------------------
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH---cCCC--------eEEEcCCCc----cCCCcCh--------------------
Confidence 5566788999999999999999986 5654 688999973 3222110
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCce-------
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKA------- 460 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i------- 460 (612)
++ .+ ..+++++.|+ ..||++.+++|+.++.+ ++++|+|+|.|+.. .+.++++..+.+...
T Consensus 191 --~~--~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~~-~~~l~~~~~~~gl~~~~~~~~~ 259 (374)
T 2xci_A 191 --GI--KL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIEN-AKIFEKKARDFGFKTSFFENLE 259 (374)
T ss_dssp --CC--CC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGGG-HHHHHHHHHHTTCCEEETTCCC
T ss_pred --hh--hh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHHH-HHHHHHHHHHCCCceEEecCCC
Confidence 00 01 1256777775 46899999999999965 68999999988732 245666666655221
Q ss_pred --EEEeccChHHHHHHHHhcCEEEeCCCC-CCCcHHHHHHHHcCCceEEc-CCCCcccceecC-ceEEEecccccccCCC
Q 007224 461 --RGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEG-FTGFQMGSFSVDCEAV 535 (612)
Q Consensus 461 --~~~~~~~~~~~~~~l~~adi~l~pS~~-E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g-~~G~l~~~~~~~~~~v 535 (612)
..+..+. +++..+|+.||++++||.+ |++|++++|||+||+|||++ +.++..|++.+. .+|+++
T Consensus 260 ~~v~~~~~~-~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~---------- 328 (374)
T 2xci_A 260 GDVILVDRF-GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGF---------- 328 (374)
T ss_dssp SSEEECCSS-SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEE----------
T ss_pred CcEEEECCH-HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEE----------
Confidence 1122222 4456799999999888765 67899999999999999975 789999988763 467766
Q ss_pred CCCCHHHHHHHHHHHHHh
Q 007224 536 DPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 536 ~~~d~~~la~~l~~ll~~ 553 (612)
.+.|+++|+++|.+++++
T Consensus 329 ~~~d~~~La~ai~~ll~d 346 (374)
T 2xci_A 329 EVKNETELVTKLTELLSV 346 (374)
T ss_dssp ECCSHHHHHHHHHHHHHS
T ss_pred EeCCHHHHHHHHHHHHhH
Confidence 778999999999999987
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.9e-18 Score=177.90 Aligned_cols=244 Identities=16% Similarity=0.105 Sum_probs=166.8
Q ss_pred CCcEEEEecC--CccchH-HHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcC
Q 007224 228 GEDVVFVAND--WHTSLI-PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 304 (612)
Q Consensus 228 ~pDvvih~h~--~~~~~~-~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 304 (612)
++| +|+.+. |++..+ ..+++...+ .++|+++++|++.+.. +. ..
T Consensus 74 ~~D-vIi~q~P~~~~~~~~~~~~~~lk~-----~~~k~i~~ihDl~pl~-~~----------~~---------------- 120 (339)
T 3rhz_A 74 HGD-VVIFQTPTWNTTEFDEKLMNKLKL-----YDIKIVLFIHDVVPLM-FS----------GN---------------- 120 (339)
T ss_dssp TTC-EEEEEECCSSCHHHHHHHHHHHTT-----SSCEEEEEESCCHHHH-CG----------GG----------------
T ss_pred CCC-EEEEeCCCcchhhHHHHHHHHHHh-----cCCEEEEEecccHHhh-Cc----------cc----------------
Confidence 589 555543 323222 344444321 4899999999875421 10 00
Q ss_pred CcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcch
Q 007224 305 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 305 ~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
......++..++.||.|+++|+.+++.+.+ +|++.. ++.++++ |+...+..
T Consensus 121 ~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~---~G~~~~------ki~~~~~------~~~~~~~~-------------- 171 (339)
T 3rhz_A 121 FYLMDRTIAYYNKADVVVAPSQKMIDKLRD---FGMNVS------KTVVQGM------WDHPTQAP-------------- 171 (339)
T ss_dssp GGGHHHHHHHHTTCSEEEESCHHHHHHHHH---TTCCCS------EEEECCS------CCCCCCCC--------------
T ss_pred hhhHHHHHHHHHHCCEEEECCHHHHHHHHH---cCCCcC------ceeecCC------CCccCccc--------------
Confidence 012235677899999999999999999987 676533 4433332 21111000
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEe
Q 007224 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 464 (612)
Q Consensus 385 ~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~ 464 (612)
+....+.++|+|+|++..... +..+ .++++|+|+|+|+.. +++ ++.+.+
T Consensus 172 ------------~~~~~~~~~i~yaG~l~k~~~-------L~~l-~~~~~f~ivG~G~~~----------~l~-nV~f~G 220 (339)
T 3rhz_A 172 ------------MFPAGLKREIHFPGNPERFSF-------VKEW-KYDIPLKVYTWQNVE----------LPQ-NVHKIN 220 (339)
T ss_dssp ------------CCCCEEEEEEEECSCTTTCGG-------GGGC-CCSSCEEEEESCCCC----------CCT-TEEEEE
T ss_pred ------------ccccCCCcEEEEeCCcchhhH-------HHhC-CCCCeEEEEeCCccc----------CcC-CEEEeC
Confidence 001124478999999985322 2233 378999999999843 244 699999
Q ss_pred ccChHHHHHHHHhcCEEEeCCCC-------CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCC
Q 007224 465 KFNIPLAHMIIAGADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 465 ~~~~~~~~~~l~~adi~l~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~ 537 (612)
..+.++++.+++.+|+.++.... .++|.+++||||||+|||+++.+++.|++.++.+|+.+
T Consensus 221 ~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~------------ 288 (339)
T 3rhz_A 221 YRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIV------------ 288 (339)
T ss_dssp CCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEE------------
T ss_pred CCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEe------------
Confidence 99999999999999999886211 25699999999999999999999999999999999986
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHH
Q 007224 538 VDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKW 580 (612)
Q Consensus 538 ~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~ 580 (612)
.+.++++++|..+. ++.+.+|++++. .+.++|....++.
T Consensus 289 ~~~~e~~~~i~~l~----~~~~~~m~~na~~~a~~~~~~~f~k~~ 329 (339)
T 3rhz_A 289 KDVEEAIMKVKNVN----EDEYIELVKNVRSFNPILRKGFFTRRL 329 (339)
T ss_dssp SSHHHHHHHHHHCC----HHHHHHHHHHHHHHTHHHHTTHHHHHH
T ss_pred CCHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 36888888888764 346778888774 3556666655443
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.8e-18 Score=180.92 Aligned_cols=230 Identities=14% Similarity=0.055 Sum_probs=158.4
Q ss_pred HHHHH-HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHH
Q 007224 310 WMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 310 ~~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
..+.. -..+|.++++|+..++.+.+ .|++.+ ++.++.|.+ |...+.+... +.....
T Consensus 158 ~~r~~~~~~a~~~~~~se~~~~~l~~---~G~~~~------ki~vvGn~~~d~~~~~~~~~-------------~~~~~~ 215 (396)
T 3dzc_A 158 GNRKLTAALTQYHFAPTDTSRANLLQ---ENYNAE------NIFVTGNTVIDALLAVREKI-------------HTDMDL 215 (396)
T ss_dssp HHHHHHHHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHH-------------HHCHHH
T ss_pred HHHHHHHHhcCEEECCCHHHHHHHHH---cCCCcC------cEEEECCcHHHHHHHhhhhc-------------ccchhh
Confidence 34444 35789999999999999986 788765 788998854 4322211000 000111
Q ss_pred HHHHHHHhC-CCCCCCCcEEEEEcCccc-ccCHHHHHHHHHhccc--CCcEEEEE-eCCchhHHHHHHHHHHHCCCceEE
Q 007224 388 KEALQAEVG-LPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 388 k~~l~~~~g-l~~~~~~~~il~iGrl~~-~Kg~d~ll~a~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~i~~ 462 (612)
++.+++++| ++.+ +..++++.+|.+. .|+++.+++|+.++.+ +++++++. |.+ +...+.++++... ..++..
T Consensus 216 ~~~~r~~lg~l~~~-~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~-~~~~~~l~~~~~~-~~~v~~ 292 (396)
T 3dzc_A 216 QATLESQFPMLDAS-KKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN-PNVREPVNKLLKG-VSNIVL 292 (396)
T ss_dssp HHHHHHTCTTCCTT-SEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHTTT-CTTEEE
T ss_pred HHHHHHHhCccCCC-CCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC-hHHHHHHHHHHcC-CCCEEE
Confidence 367788888 4432 2234445557543 4789999999999865 78999885 544 3355566654322 234666
Q ss_pred EeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCceEEEecccccccCCCCCCCHH
Q 007224 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 541 (612)
...........+|+.||++|.+| |.+++|||++|+|+|++ +.++..|++.+| +++++ . .|++
T Consensus 293 ~~~lg~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv----------~-~d~~ 355 (396)
T 3dzc_A 293 IEPQQYLPFVYLMDRAHIILTDS-----GGIQEEAPSLGKPVLVMRETTERPEAVAAG-TVKLV----------G-TNQQ 355 (396)
T ss_dssp ECCCCHHHHHHHHHHCSEEEESC-----SGGGTTGGGGTCCEEECCSSCSCHHHHHHT-SEEEC----------T-TCHH
T ss_pred eCCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHcCCCEEEccCCCcchHHHHcC-ceEEc----------C-CCHH
Confidence 55555455668999999999998 34449999999999999 688888988877 56764 4 4899
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 542 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 542 ~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
++++++.+++++ ++.+.+|++++ ..|.....+++..++++
T Consensus 356 ~l~~ai~~ll~d--~~~~~~m~~~~--~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 356 QICDALSLLLTD--PQAYQAMSQAH--NPYGDGKACQRIADILA 395 (396)
T ss_dssp HHHHHHHHHHHC--HHHHHHHHTSC--CTTCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcC--HHHHHHHhhcc--CCCcCChHHHHHHHHHh
Confidence 999999999998 77777777653 45777777777776654
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-17 Score=179.20 Aligned_cols=226 Identities=12% Similarity=0.072 Sum_probs=159.9
Q ss_pred HHHHH-HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCC-CccCccCCCCccccccccCcchhhcchHHHH
Q 007224 311 MKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 311 ~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
.+..+ ..+|.+++.|+..++.+.+ .|++.+ ++.++.|. +|...+.+.... +
T Consensus 162 ~r~~~~~~a~~~~~~se~~~~~l~~---~Gi~~~------~i~vvGn~~~D~~~~~~~~~~------------------~ 214 (403)
T 3ot5_A 162 NRQLTGVMADIHFSPTKQAKENLLA---EGKDPA------TIFVTGNTAIDALKTTVQKDY------------------H 214 (403)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHSCTTC------------------C
T ss_pred HHHHHHHhcCEEECCCHHHHHHHHH---cCCCcc------cEEEeCCchHHHHHhhhhhhc------------------c
Confidence 34433 3589999999999999986 787765 88999884 564433222100 0
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEec
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~-~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~ 465 (612)
...++++ + ++..++++.||.+. .|+++.+++|+.++.+ +++++++.+...+...+.++++.... .++.....
T Consensus 215 ~~~~~~l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-~~v~l~~~ 289 (403)
T 3ot5_A 215 HPILENL--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGH-ERIHLIEP 289 (403)
T ss_dssp CHHHHSC--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTC-TTEEEECC
T ss_pred hHHHHhc--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCC-CCEEEeCC
Confidence 1223333 2 23345666778754 4778999999999865 78999987433333555666543222 35666666
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCceEEEecccccccCCCCCCCHHHHH
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 544 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la 544 (612)
........+|+.||++|.+| |...+|||++|+|+|+. +.++..|.+..| +|+++ .+ |+++++
T Consensus 290 l~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv----------~~-d~~~l~ 352 (403)
T 3ot5_A 290 LDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLI----------GT-NKENLI 352 (403)
T ss_dssp CCHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEEC----------CS-CHHHHH
T ss_pred CCHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEc----------CC-CHHHHH
Confidence 66667778999999999888 55669999999999999 678888888766 78875 44 999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 545 TTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 545 ~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+++.+++++ ++.+.+|+++ ...|.....+++..+++.+.+.
T Consensus 353 ~ai~~ll~~--~~~~~~m~~~--~~~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 353 KEALDLLDN--KESHDKMAQA--ANPYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHHHHHHHC--HHHHHHHHHS--CCTTCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcC--HHHHHHHHhh--cCcccCCcHHHHHHHHHHHHhC
Confidence 999999998 7777777654 3457777777888887777664
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.4e-18 Score=182.77 Aligned_cols=159 Identities=16% Similarity=0.074 Sum_probs=118.8
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
..++++.|++. .++.+.+.++++.+.+.++++++++.+.. ..+.++ +.+.++...... + ...+++.||++|
T Consensus 243 ~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~l~----~~~~~v~~~~~~--~-~~~~l~~ad~~v 313 (412)
T 3otg_A 243 PLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSL-DVSGLG----EVPANVRLESWV--P-QAALLPHVDLVV 313 (412)
T ss_dssp CEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSC-CCTTCC----CCCTTEEEESCC--C-HHHHGGGCSEEE
T ss_pred CEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCC-Chhhhc----cCCCcEEEeCCC--C-HHHHHhcCcEEE
Confidence 35678889986 78888888888887666788887776542 111121 234456666544 2 456999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCC----CcccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHHhhCH
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATYGT 556 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~~~~~ 556 (612)
.++ .+.+++|||++|+|+|+...+ +..+.+.+.++|+++ ++. |+++++++|.+++++ +
T Consensus 314 ~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~----------~~~~~~~~~l~~ai~~ll~~--~ 377 (412)
T 3otg_A 314 HHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHL----------LPDNISPDSVSGAAKRLLAE--E 377 (412)
T ss_dssp ESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------CGGGCCHHHHHHHHHHHHHC--H
T ss_pred ECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHHHHHHHHhC--H
Confidence 765 348999999999999996654 467888888899987 665 899999999999998 5
Q ss_pred HHHHHHHHHH--HHhcCCcHHHHHHHHHHHHH
Q 007224 557 QALAEMMKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 557 ~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~ 586 (612)
+.+.+|++.+ +.+.++|+.+++.+++++.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 378 SYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 5666665554 46778999999999998753
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.69 E-value=7e-15 Score=155.29 Aligned_cols=161 Identities=12% Similarity=0.054 Sum_probs=104.2
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEE-eCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lviv-G~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
++++.|++...+..+.+.+++..+.. .+++++++ |.+. .+ .+.+...+.+.++... .|.. .++++|+.||++|
T Consensus 183 ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~--~~-~~~~~~~~~~~~~~v~-~f~~-dm~~~l~~aDlvI 257 (365)
T 3s2u_A 183 LLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH--AE-ITAERYRTVAVEADVA-PFIS-DMAAAYAWADLVI 257 (365)
T ss_dssp EEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT--HH-HHHHHHHHTTCCCEEE-SCCS-CHHHHHHHCSEEE
T ss_pred EEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc--cc-cccceecccccccccc-cchh-hhhhhhccceEEE
Confidence 45556788888888999999999865 45665543 4333 33 3333444455444443 3433 3557999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCCc--------ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
.-+ -++++.|+|++|+|+|....+.. .+.+.+.+.|+++ .-+..++++|+++|.++++|
T Consensus 258 ~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l--------~~~~~~~~~L~~~i~~ll~d- 324 (365)
T 3s2u_A 258 CRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL--------PQKSTGAAELAAQLSEVLMH- 324 (365)
T ss_dssp ECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC--------CTTTCCHHHHHHHHHHHHHC-
T ss_pred ecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe--------ecCCCCHHHHHHHHHHHHCC-
Confidence 533 36899999999999998765432 2345556678876 11233689999999999998
Q ss_pred CHHHHHHHHHHHHH--hcCCcHHHHHHHHHHH
Q 007224 555 GTQALAEMMKNGMA--QDLSWKGPAKKWEETL 584 (612)
Q Consensus 555 ~~~~~~~~~~~~~~--~~~sw~~~a~~~~~~y 584 (612)
++.+++|++++.. .....+.+++.++++.
T Consensus 325 -~~~~~~m~~~a~~~~~~~aa~~ia~~i~~la 355 (365)
T 3s2u_A 325 -PETLRSMADQARSLAKPEATRTVVDACLEVA 355 (365)
T ss_dssp -THHHHHHHHHHHHTCCTTHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 7788889887743 2233444444444443
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.65 E-value=6.6e-15 Score=158.43 Aligned_cols=161 Identities=13% Similarity=0.073 Sum_probs=110.3
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhccc-CCcEE-EEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~l-vivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
+.++++++|++. .++.+.+.++++.+.+ +++++ +++|.+... +.++ +.+.++......+.. .+|+.||
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~--~~l~----~~~~~v~~~~~~~~~---~~l~~ad 301 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP--AELG----ELPDNVEVHDWVPQL---AILRQAD 301 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CG--GGGC----SCCTTEEEESSCCHH---HHHTTCS
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh--HHhc----cCCCCeEEEecCCHH---HHhhccC
Confidence 346788899998 5666666555555544 57888 467876521 1221 244557666544443 5899999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHHh
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~~ 553 (612)
++|..+ -+++++|||++|+|+|+...++ ..+.+.+.+.|+.+ ++. |+++++++|.+++++
T Consensus 302 ~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~ 367 (430)
T 2iyf_A 302 LFVTHA----GAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKL----------ATEEATADLLRETALALVDD 367 (430)
T ss_dssp EEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CCC-CCHHHHHHHHHHHHHC
T ss_pred EEEECC----CccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEc----------CCCCCCHHHHHHHHHHHHcC
Confidence 999754 2379999999999999998765 45667777789976 555 899999999999987
Q ss_pred hCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 554 ~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
++.++++++.+ +.+.++++.+++.+++++.+..
T Consensus 368 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 402 (430)
T 2iyf_A 368 --PEVARRLRRIQAEMAQEGGTRRAADLIEAELPARH 402 (430)
T ss_dssp --HHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC--
T ss_pred --HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhccc
Confidence 55455555443 3456799999998888876543
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-15 Score=162.12 Aligned_cols=153 Identities=14% Similarity=0.115 Sum_probs=99.4
Q ss_pred CCcEEEEEcCccccc----------CHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007224 402 NIPVIGFIGRLEEQK----------GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 402 ~~~~il~iGrl~~~K----------g~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~ 471 (612)
..++++++|++...| .++.+++++.++ ++++++++.+.. .+.++ +.+.++......+ .
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~---~ 294 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL--AQTLQ----PLPEGVLAAGQFP---L 294 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC--------------CCTTEEEESCCC---H
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc--hhhhc----cCCCcEEEeCcCC---H
Confidence 345777889996544 466666666655 789999887652 22232 3455676665543 3
Q ss_pred HHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEE----cCCCCcccceecCceEEEecccccccCCCCCC--CHHHHHH
Q 007224 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVST 545 (612)
Q Consensus 472 ~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~ 545 (612)
..+++.||++|. ++.+.+++|||++|+|+|+ .+..+..+.+.+.+.|+++ ++. |++++++
T Consensus 295 ~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~ 360 (398)
T 4fzr_A 295 SAIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEV----------PWEQAGVESVLA 360 (398)
T ss_dssp HHHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEEC----------C-------CHHH
T ss_pred HHHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHH
Confidence 568999999994 4557899999999999999 4555777888888899986 555 7899999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHH
Q 007224 546 TVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 546 ~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~ 582 (612)
+|.+++++ ++.+++|.+.+ +.+..+|+.+++.+++
T Consensus 361 ai~~ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 361 ACARIRDD--SSYVGNARRLAAEMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHHC--THHHHHHHHHHHHHTTSCCHHHHHHHHTC
T ss_pred HHHHHHhC--HHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 99999998 45555555444 4677899988887653
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-14 Score=154.64 Aligned_cols=158 Identities=14% Similarity=0.134 Sum_probs=108.3
Q ss_pred CcEEEEEcCcccccCH-HHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 403 IPVIGFIGRLEEQKGS-DILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~-d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
..++++.|++...|+. ..+++++.+..+ +++++++++.+.. .+.++ ..+.++......+.. .+++.||+
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~ad~ 289 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH--RALLT----DLPDNARIAESVPLN---LFLRTCEL 289 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG--GGGCT----TCCTTEEECCSCCGG---GTGGGCSE
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc--hhhcc----cCCCCEEEeccCCHH---HHHhhCCE
Confidence 3466667998765433 555555444433 5899999987652 11221 234456655444432 36799999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEc----CCCCcccceecCceEEEecccccccCCCCC----CCHHHHHHHHHHHHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDP----VDVAAVSTTVRRALA 552 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~----~d~~~la~~l~~ll~ 552 (612)
+|. ++.+.+++|||++|+|+|+. +..+..+.+.+.+.|+++ ++ .|+++++++|.++++
T Consensus 290 ~v~----~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~~~l~~ai~~ll~ 355 (391)
T 3tsa_A 290 VIC----AGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICL----------PDEQAQSDHEQFTDSIATVLG 355 (391)
T ss_dssp EEE----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEEC----------CSHHHHTCHHHHHHHHHHHHT
T ss_pred EEe----CCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEec----------CcccccCCHHHHHHHHHHHHc
Confidence 995 44557999999999999994 445567778888899986 66 689999999999999
Q ss_pred hhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 553 ~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~ 585 (612)
+ ++.+++|.+.+ +.+..+++.+++.+++++.
T Consensus 356 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 356 D--TGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp C--THHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred C--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 8 44444454433 5677899998888877653
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.8e-13 Score=141.94 Aligned_cols=157 Identities=15% Similarity=0.064 Sum_probs=106.2
Q ss_pred CCcEEEEEcCccccc--CHHHHHHHHHhcccCCcEEEE-EeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 402 NIPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~il~iGrl~~~K--g~d~ll~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
...++++.|+....+ .+..+++++..+ ++++++ +|.+.. .+.++ +.+.++......+.. ++++.|
T Consensus 231 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~--~~~~~----~~~~~v~~~~~~~~~---~ll~~a 298 (402)
T 3ia7_A 231 APVLLVSLGNQFNEHPEFFRACAQAFADT---PWHVVMAIGGFLD--PAVLG----PLPPNVEAHQWIPFH---SVLAHA 298 (402)
T ss_dssp CCEEEEECCSCSSCCHHHHHHHHHHHTTS---SCEEEEECCTTSC--GGGGC----SCCTTEEEESCCCHH---HHHTTE
T ss_pred CCEEEEECCCCCcchHHHHHHHHHHHhcC---CcEEEEEeCCcCC--hhhhC----CCCCcEEEecCCCHH---HHHhhC
Confidence 345677889887654 344444444443 477666 555431 11111 234556665544443 699999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEc-----CCCCcccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVA-----STGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s-----~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll 551 (612)
|++|..+- ..+++|||++|+|+|+. +..+..+.+.+.+.|..+ .+. +++++++++.+++
T Consensus 299 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~~~~ll 364 (402)
T 3ia7_A 299 RACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL----------RPDQLEPASIREAVERLA 364 (402)
T ss_dssp EEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC----------CGGGCSHHHHHHHHHHHH
T ss_pred CEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc----------cCCCCCHHHHHHHHHHHH
Confidence 99996542 37889999999999954 445677777888889876 554 8999999999999
Q ss_pred HhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHH
Q 007224 552 ATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~ 586 (612)
++ ++.+.++.+.+ +.+..+++..++.+++++.+
T Consensus 365 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 365 AD--SAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HC--HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 98 44444444333 46778899999988888764
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.8e-13 Score=145.67 Aligned_cols=153 Identities=13% Similarity=0.086 Sum_probs=108.7
Q ss_pred CcEEEEEcCcccc-cCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 403 IPVIGFIGRLEEQ-KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 403 ~~~il~iGrl~~~-Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
.++++++|++... ++.+.+.++++.+.+.++++++++.+.. .+.++ ..+.++......+ ...+++.||++
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--~~~l~----~~~~~v~~~~~~~---~~~ll~~ad~~ 303 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--ISPLG----TLPRNVRAVGWTP---LHTLLRTCTAV 303 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--CGGGC----SCCTTEEEESSCC---HHHHHTTCSEE
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--hhhhc----cCCCcEEEEccCC---HHHHHhhCCEE
Confidence 3577778999655 4656665555555545899999987753 11111 2455676665543 34589999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEE----cCCCCcc--cceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHHh
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLV--DTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~--e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~~ 553 (612)
|. .+.+.+++|||++|+|+|+ .+..+.. +.+.+.+.|+.+ ++. +.++++ +++++
T Consensus 304 v~----~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~----------~~~~~~~~~l~----~ll~~ 365 (398)
T 3oti_A 304 VH----HGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVS----------TSDKVDADLLR----RLIGD 365 (398)
T ss_dssp EE----CCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEEC----------CGGGCCHHHHH----HHHHC
T ss_pred EE----CCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEee----------CCCCCCHHHHH----HHHcC
Confidence 95 4456799999999999999 6678888 999988899986 544 566665 78887
Q ss_pred hCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 554 ~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y 584 (612)
+..+++|.+.+ +....+|+.+++.+++++
T Consensus 366 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 366 --ESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp --HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 55555555444 567889999999888765
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=5.2e-12 Score=134.93 Aligned_cols=157 Identities=14% Similarity=0.032 Sum_probs=104.4
Q ss_pred CCcEEEEEcCccccc--CHHHHHHHHHhcccCCcEEEE-EeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 402 NIPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~il~iGrl~~~K--g~d~ll~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
...++++.|+..... .+..+++++.++ ++++++ +|.+.. .+.++ ..+.++......+.. .+++.|
T Consensus 247 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~a 314 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQ---PWHVVMTLGGQVD--PAALG----DLPPNVEAHRWVPHV---KVLEQA 314 (415)
T ss_dssp CCEEEEECTTTSCCCHHHHHHHHHHHTTS---SCEEEEECTTTSC--GGGGC----CCCTTEEEESCCCHH---HHHHHE
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHhcC---CcEEEEEeCCCCC--hHHhc----CCCCcEEEEecCCHH---HHHhhC
Confidence 345677788876433 244445554444 488877 565431 11111 234556665444433 589999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEc----CCCCcccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 552 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~ 552 (612)
|++|..+ -..+++|||++|+|+|+. +.....+.+.+.+.|..+ .+. ++++++++|.++++
T Consensus 315 d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~ 380 (415)
T 3rsc_A 315 TVCVTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVL----------PGEKADGDTLLAAVGAVAA 380 (415)
T ss_dssp EEEEESC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEEC----------CGGGCCHHHHHHHHHHHHT
T ss_pred CEEEECC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEc----------ccCCCCHHHHHHHHHHHHc
Confidence 9999654 236889999999999994 444566777777788876 544 89999999999999
Q ss_pred hhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 553 ~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~ 586 (612)
+ ++.++++.+.+ +.+..+++..++.+++++.+
T Consensus 381 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 381 D--PALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp C--HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 8 44444444333 45678888888888877653
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.4e-11 Score=130.18 Aligned_cols=153 Identities=13% Similarity=0.109 Sum_probs=105.3
Q ss_pred CcEEEEEcCcccc-------cCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007224 403 IPVIGFIGRLEEQ-------KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 403 ~~~il~iGrl~~~-------Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l 475 (612)
..+++++|++... +.++.+++++.++ ++++++++.+. ..+.++. .+.++.. ...+. .+++
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~--~~~~l~~----~~~~v~~-~~~~~---~~~l 277 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPDT--VAEALRA----EVPQARV-GWTPL---DVVA 277 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCHH--HHHHHHH----HCTTSEE-ECCCH---HHHG
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCCC--CHHhhCC----CCCceEE-cCCCH---HHHH
Confidence 3578889999865 6778888888765 78888876533 2223322 3445665 44332 3588
Q ss_pred HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCC--CHHHHHHHHHH
Q 007224 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRR 549 (612)
Q Consensus 476 ~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ 549 (612)
+.||++|..+ .+++++|||++|+|+|+...++ ..+.+.+.+.|+.+ ++. +.++++++|.+
T Consensus 278 ~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ 343 (384)
T 2p6p_A 278 PTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIAL----------LPGEDSTEAIADSCQE 343 (384)
T ss_dssp GGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTCCCHHHHHHHHHH
T ss_pred hhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEec----------CcCCCCHHHHHHHHHH
Confidence 9999999753 4568999999999999998754 66667777789876 443 79999999999
Q ss_pred HHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHH
Q 007224 550 ALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y 584 (612)
++++ ++.++++.+.+ +...-.-+.+++.+++++
T Consensus 344 ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 344 LQAK--DTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHC--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHcC--HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 9998 44444544433 344445566666555554
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.44 E-value=2e-12 Score=137.21 Aligned_cols=194 Identities=20% Similarity=0.150 Sum_probs=133.0
Q ss_pred HHHH-HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHHHH
Q 007224 312 KAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 312 k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~ 389 (612)
+..+ ..+|.+++.++..++.+.+ .|++.+ ++.++.|.+ |...+. .....+.
T Consensus 140 R~~~~~~a~~~~~~te~~~~~l~~---~G~~~~------~I~vtGnp~~D~~~~~------------------~~~~~~~ 192 (385)
T 4hwg_A 140 RKIIDHISDVNITLTEHARRYLIA---EGLPAE------LTFKSGSHMPEVLDRF------------------MPKILKS 192 (385)
T ss_dssp HHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCSHHHHHHHH------------------HHHHHHC
T ss_pred HHHHHhhhceeecCCHHHHHHHHH---cCCCcC------cEEEECCchHHHHHHh------------------hhhcchh
Confidence 3343 4689999999999999986 787765 788888743 422110 0112345
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcc---cccCHHHHHHHHHhcccC-CcEEEEEeCCchhHHHHHHHH-H-HHCCCceEEE
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQL-E-ILYPEKARGV 463 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~---~~Kg~d~ll~a~~~l~~~-~~~lvivG~g~~~~~~~l~~l-~-~~~~~~i~~~ 463 (612)
.+++++|++. +..+++..+|.+ ..|+++.+++|+.++.+. ++++++... +...+.++++ . .....++...
T Consensus 193 ~~~~~lgl~~--~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~ 268 (385)
T 4hwg_A 193 DILDKLSLTP--KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFL 268 (385)
T ss_dssp CHHHHTTCCT--TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEEC
T ss_pred HHHHHcCCCc--CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEE
Confidence 6788899864 335566677754 347899999999988543 677777543 3345555544 1 1112346554
Q ss_pred eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC-cccceecCceEEEecccccccCCCCCCCHHH
Q 007224 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 464 ~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 542 (612)
..+.......+++.||+++.+| |.++.||+++|+|+|+..... ..|.+..| +++++ . .|.++
T Consensus 269 ~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv----------~-~d~~~ 331 (385)
T 4hwg_A 269 PAFSFTDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMS----------G-FKAER 331 (385)
T ss_dssp CCCCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEEC----------C-SSHHH
T ss_pred cCCCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEc----------C-CCHHH
Confidence 4455555678999999999776 567899999999999986543 56777666 66654 3 48999
Q ss_pred HHHHHHHHHHh
Q 007224 543 VSTTVRRALAT 553 (612)
Q Consensus 543 la~~l~~ll~~ 553 (612)
+++++.+++++
T Consensus 332 i~~ai~~ll~d 342 (385)
T 4hwg_A 332 VLQAVKTITEE 342 (385)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhC
Confidence 99999999987
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-10 Score=124.65 Aligned_cols=154 Identities=16% Similarity=0.083 Sum_probs=105.8
Q ss_pred cEEEEEcCccc-----ccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 404 PVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 404 ~~il~iGrl~~-----~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
.++++.|++.. .|.++.+++++.++ ++++++.+.+.. .+.++ ..+.++......+. ..++..|
T Consensus 269 ~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~--~~~l~----~~~~~v~~~~~~~~---~~ll~~a 336 (441)
T 2yjn_A 269 RVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQ--LEGVA----NIPDNVRTVGFVPM---HALLPTC 336 (441)
T ss_dssp EEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTT--TSSCS----SCCSSEEECCSCCH---HHHGGGC
T ss_pred EEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcc--hhhhc----cCCCCEEEecCCCH---HHHHhhC
Confidence 47788899875 48888999998876 688888766542 11111 23445665544443 3478999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 552 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~ 552 (612)
|++|.. +.+.+++|||++|+|+|+....+ ..+.+.+.+.|+.+ ++. ++++++++|.++++
T Consensus 337 d~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~ 402 (441)
T 2yjn_A 337 AATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIAL----------PVPELTPDQLRESVKRVLD 402 (441)
T ss_dssp SEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTTCCHHHHHHHHHHHHH
T ss_pred CEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEc----------ccccCCHHHHHHHHHHHhc
Confidence 999963 44579999999999999998743 55667777789876 443 89999999999999
Q ss_pred hhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 553 ~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~ 585 (612)
+ ++.++++.+.+ +......+.+++.+++++.
T Consensus 403 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 403 D--PAHRAGAARMRDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp C--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 8 54445554433 4567788888887777653
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.11 E-value=8.3e-09 Score=110.47 Aligned_cols=157 Identities=10% Similarity=0.003 Sum_probs=98.7
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEE-EEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
...++++.|+.. .+..+.+.+++..+.+.+++++ ++|.+... +.+ ...+.++......+.. .+++.||+
T Consensus 255 ~~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~--~~~----~~~~~~v~~~~~~~~~---~~l~~~d~ 324 (424)
T 2iya_A 255 RPVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP--ADL----GEVPPNVEVHQWVPQL---DILTKASA 324 (424)
T ss_dssp CCEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSCG--GGG----CSCCTTEEEESSCCHH---HHHTTCSE
T ss_pred CCEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCCh--HHh----ccCCCCeEEecCCCHH---HHHhhCCE
Confidence 345777789887 4444444444454544577875 46765421 111 1245556655443433 58999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHHhh
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATY 554 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~~~ 554 (612)
+|.. +-.++++|||++|+|+|+....+ ..+.+.+.+.|+.+ +.. +.++++++|.+++++
T Consensus 325 ~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~- 389 (424)
T 2iya_A 325 FITH----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHI----------PRDQVTAEKLREAVLAVASD- 389 (424)
T ss_dssp EEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHHHHHC-
T ss_pred EEEC----CchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHHcC-
Confidence 8863 22379999999999999997643 34556666788876 433 899999999999987
Q ss_pred CHHHHHHHHHHH--HHhcCCcHHHHHHHHHHH
Q 007224 555 GTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 555 ~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y 584 (612)
++.++++.+.+ +......+..++.+++++
T Consensus 390 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 390 -PGVAERLAAVRQEIREAGGARAAADILEGIL 420 (424)
T ss_dssp -HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 44334333322 334455556666665554
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=8.3e-09 Score=109.18 Aligned_cols=153 Identities=17% Similarity=0.141 Sum_probs=89.5
Q ss_pred cEEEEEcCccccc-CHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 404 PVIGFIGRLEEQK-GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~il~iGrl~~~K-g~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
.+++..|++...+ +.+.+.+++..+.+.+.++++.+.+... ......+.++......+. ..++..+|++|
T Consensus 239 ~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~------~~~~~~~~~v~~~~~~p~---~~lL~~~~~~v 309 (400)
T 4amg_A 239 RIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDL------ALLGELPANVRVVEWIPL---GALLETCDAII 309 (400)
T ss_dssp EEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCC------CCCCCCCTTEEEECCCCH---HHHHTTCSEEE
T ss_pred EEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccc------cccccCCCCEEEEeecCH---HHHhhhhhhee
Confidence 4566678876544 4455666666666667888877654421 001123455655444443 24789999988
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH-H
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-Q 557 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~-~ 557 (612)
. .+-.++++|||++|+|+|+....+ ..+.+.+.+.|+.+ +. .+..+++|.++++|+.- +
T Consensus 310 ~----h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l----------~~--~~~~~~al~~lL~d~~~r~ 373 (400)
T 4amg_A 310 H----HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDA----------EA--GSLGAEQCRRLLDDAGLRE 373 (400)
T ss_dssp E----CCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEEC----------CT--TTCSHHHHHHHHHCHHHHH
T ss_pred c----cCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEc----------CC--CCchHHHHHHHHcCHHHHH
Confidence 4 334578999999999999965443 44556566678765 33 33457889999998321 1
Q ss_pred HHHHHHHHHHHhcCCcHHHHHHHHH
Q 007224 558 ALAEMMKNGMAQDLSWKGPAKKWEE 582 (612)
Q Consensus 558 ~~~~~~~~~~~~~~sw~~~a~~~~~ 582 (612)
..+++++ .++..-+-...++.+++
T Consensus 374 ~a~~l~~-~~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 374 AALRVRQ-EMSEMPPPAETAAXLVA 397 (400)
T ss_dssp HHHHHHH-HHHTSCCHHHHHHHHHH
T ss_pred HHHHHHH-HHHcCCCHHHHHHHHHH
Confidence 2222222 23343455566655554
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=8.3e-08 Score=102.21 Aligned_cols=125 Identities=13% Similarity=0.082 Sum_probs=84.5
Q ss_pred CcEEEEEcCcc-cccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 403 IPVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 403 ~~~il~iGrl~-~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
.++++..|++. ..+..+.+++++.++ ++++++.+.... .. . ...+.++......+. ..++..||++
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~-~~----~--~~~~~~v~~~~~~~~---~~ll~~~d~~ 288 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAG-LG----R--IDEGDDCLVVGEVNH---QVLFGRVAAV 288 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTT-CC----C--SSCCTTEEEESSCCH---HHHGGGSSEE
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcc-cc----c--ccCCCCEEEecCCCH---HHHHhhCcEE
Confidence 46777889987 677778888888776 677777654331 10 0 112445665544443 3478999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCc----ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
|..+ -..++.||+++|+|+|+....+- .+.+.+.+.|..+. .+..+.++++++|.++++
T Consensus 289 v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~--------~~~~~~~~l~~ai~~ll~ 351 (404)
T 3h4t_A 289 VHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHD--------GPTPTVESLSAALATALT 351 (404)
T ss_dssp EECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS--------SSSCCHHHHHHHHHHHTS
T ss_pred EECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccC--------cCCCCHHHHHHHHHHHhC
Confidence 9533 23789999999999999865442 33455556788651 122379999999999996
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.85 E-value=1.5e-08 Score=111.66 Aligned_cols=177 Identities=12% Similarity=0.126 Sum_probs=120.1
Q ss_pred HHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEE--EEeCCch---hHHHHHHHHHHHCCCceEEEec
Q 007224 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQII--VLGTGKK---PMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 393 ~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lv--ivG~g~~---~~~~~l~~l~~~~~~~i~~~~~ 465 (612)
..+|++.+++.++++.++++ .|..+.+++++.++.+ |+..++ ++|.+.. ...+.+.+.... +++.+.+.
T Consensus 431 ~~~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~--~Rv~F~g~ 506 (631)
T 3q3e_A 431 VDYLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLG--DSATAHPH 506 (631)
T ss_dssp CCCCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHG--GGEEEECC
T ss_pred ccccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCC--ccEEEcCC
Confidence 34567654445777778874 7889999999998876 665553 3674321 222333333322 46777777
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCccccee------cCceEEEecccccccCCCCCCC
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~------~g~~G~l~~~~~~~~~~v~~~d 539 (612)
.+.+.....|+.+|++|-|+.+++ |++.+|||+||+|||+....++..-+. -|-.++++ ..|
T Consensus 507 ~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LI-----------A~d 574 (631)
T 3q3e_A 507 SPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLI-----------ANT 574 (631)
T ss_dssp CCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGE-----------ESS
T ss_pred CCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCccee-----------cCC
Confidence 777666679999999999997755 999999999999999987665554432 13333211 258
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHh-----cCCcHHHHHHHHHHHHHHHH
Q 007224 540 VAAVSTTVRRALATYGTQALAEMMKNGMAQ-----DLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 540 ~~~la~~l~~ll~~~~~~~~~~~~~~~~~~-----~~sw~~~a~~~~~~y~~l~~ 589 (612)
.+++++...++..| ++.+.++.++.... -|+ ...+++++.|+++..
T Consensus 575 ~eeYv~~Av~La~D--~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 575 VDEYVERAVRLAEN--HQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHHHHHHHHHHHC--HHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--HHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHHH
Confidence 99999999999998 67777776665432 333 445666666666653
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.75 E-value=4.7e-08 Score=90.79 Aligned_cols=122 Identities=10% Similarity=0.055 Sum_probs=92.3
Q ss_pred CcEEEEEcCcc---cccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--Hh
Q 007224 403 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AG 477 (612)
Q Consensus 403 ~~~il~iGrl~---~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l--~~ 477 (612)
..++++.|++. +.|.++.+++++.++ +.++++++.+... ...+.++......+.. +++ +.
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~---------~~~~~~v~~~~~~~~~---~~l~~~~ 86 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKP---------DTLGLNTRLYKWIPQN---DLLGHPK 86 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCC---------TTCCTTEEEESSCCHH---HHHTSTT
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCc---------ccCCCcEEEecCCCHH---HHhcCCC
Confidence 46788899985 678888888888766 5788887765521 1234557666555553 355 89
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC----CcccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll 551 (612)
||++|.. +.+.+++|||++|+|+|+.... +..+.+.+.+.|+.+ ++. +.++++++|.+++
T Consensus 87 ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 87 TRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRV----------DFNTMSSTDLLNALKRVI 152 (170)
T ss_dssp EEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred cCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEe----------ccccCCHHHHHHHHHHHH
Confidence 9999963 4568999999999999999864 345667777889976 554 8899999999999
Q ss_pred Hh
Q 007224 552 AT 553 (612)
Q Consensus 552 ~~ 553 (612)
.+
T Consensus 153 ~~ 154 (170)
T 2o6l_A 153 ND 154 (170)
T ss_dssp HC
T ss_pred cC
Confidence 87
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.69 E-value=5.6e-06 Score=88.15 Aligned_cols=154 Identities=13% Similarity=0.063 Sum_probs=98.4
Q ss_pred CcEEEEEcCcc---cccCHHHHHHHHHhcccCCcEEEEE-eCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 403 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~il~iGrl~---~~Kg~d~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
..++++.|++. ..+..+.+++++..+ +++++++ |.+... . ...+.++......+. .+++..|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~---~~ll~~~ 303 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTELV----L----PDDRDDCFAIDEVNF---QALFRRV 303 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTCC----C----SCCCTTEEEESSCCH---HHHGGGS
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCcccc----c----cCCCCCEEEeccCCh---HHHhccC
Confidence 35777889985 567778888888776 5677665 655421 1 234455665544442 3578999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
|++|. .+-..+++||+++|+|+|+....+ ..+.+.+.+.|+.+. .+..+.++++++|.++ .+
T Consensus 304 d~~v~----~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~--------~~~~~~~~l~~~i~~l-~~- 369 (416)
T 1rrv_A 304 AAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHD--------GPTPTFESLSAALTTV-LA- 369 (416)
T ss_dssp SEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECS--------SSCCCHHHHHHHHHHH-TS-
T ss_pred CEEEe----cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCC--------CCCCCHHHHHHHHHHh-hC-
Confidence 99996 233469999999999999986543 444566667788751 1235889999999999 76
Q ss_pred CHHHHHHHHHHHHHhcCCcHHHHHHHHHHH-HHHH
Q 007224 555 GTQALAEMMKNGMAQDLSWKGPAKKWEETL-LNLE 588 (612)
Q Consensus 555 ~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y-~~l~ 588 (612)
++.++++.+. .+.+.-..-. +..+.+ +.+.
T Consensus 370 -~~~~~~~~~~--~~~~~~~~~~-~~~~~i~e~~~ 400 (416)
T 1rrv_A 370 -PETRARAEAV--AGMVLTDGAA-AAADLVLAAVG 400 (416)
T ss_dssp -HHHHHHHHHH--TTTCCCCHHH-HHHHHHHHHHH
T ss_pred -HHHHHHHHHH--HHHHhhcCcH-HHHHHHHHHHh
Confidence 4444444332 2233323333 555555 5554
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.02 E-value=2.3e-05 Score=83.40 Aligned_cols=157 Identities=16% Similarity=0.066 Sum_probs=103.3
Q ss_pred CcEEEEEcCc-ccccCHHHHHHHHHhcccCCcEEEEE-eCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 403 IPVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~il~iGrl-~~~Kg~d~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
..++++.|++ ...+..+.+++++.++ +.+++++ |.+... . ...+.++......+.. ++++.||+
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~~---~~l~~~d~ 304 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLV----L----PDDGADCFAIGEVNHQ---VLFGRVAA 304 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCC----C----SSCGGGEEECSSCCHH---HHGGGSSE
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCccc----c----cCCCCCEEEeCcCChH---HHHhhCCE
Confidence 3678888998 5888889999999877 4566655 655421 0 1233446554444432 46899999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~ 556 (612)
+|..+ -.++++|||++|+|+|+....+ ..+.+.+.+.|+.+. .+..+.++++++|.++ ++ +
T Consensus 305 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~--------~~~~~~~~l~~~i~~l-~~--~ 369 (415)
T 1iir_A 305 VIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHD--------GPIPTFDSLSAALATA-LT--P 369 (415)
T ss_dssp EEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS--------SSSCCHHHHHHHHHHH-TS--H
T ss_pred EEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCC--------cCCCCHHHHHHHHHHH-cC--H
Confidence 99632 2369999999999999997654 455566667888761 1224889999999999 76 4
Q ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 557 QALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 557 ~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
+.++++.+. .+.+....-+++..+.++++...
T Consensus 370 ~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 370 ETHARATAV--AGTIRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp HHHHHHHHH--HHHSCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHH--HHHHhhcChHHHHHHHHHHHHhc
Confidence 444444332 33455566677777777776643
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0022 Score=73.19 Aligned_cols=182 Identities=13% Similarity=-0.003 Sum_probs=121.7
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC---CceEEEecc
Q 007224 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 466 (612)
Q Consensus 392 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~i~~~~~~ 466 (612)
|+.+|||.+ .++++.+.+ ..|=-+.+++++.++.+ |+.+|++...+.. .++.+++...+.+ +++.+....
T Consensus 514 R~~~gLp~~--~v~f~~fN~--~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 514 RSQYGLPED--AIVYCNFNQ--LYKIDPSTLQMWANILKRVPNSVLWLLRFPAV-GEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp GGGGTCCTT--SEEEECCSC--GGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG-GHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred hhhcCCCCC--CEEEEeCCc--cccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH-HHHHHHHHHHhcCCCcCeEEECCCC
Confidence 677899854 355555544 46666777777777765 8999999886543 4556666666654 467777666
Q ss_pred ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---ceEEEecccccccCCCCCCCHHHH
Q 007224 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---FTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---~~G~l~~~~~~~~~~v~~~d~~~l 543 (612)
+.+.--..+..+|++|=|.-+ +-|++.+||+.+|+|||+-....+..=+..+ ..|+ .++| ..|.++.
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl--------~e~i-a~~~~~Y 658 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGC--------LELI-AKNRQEY 658 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTC--------GGGB-CSSHHHH
T ss_pred CHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCC--------cccc-cCCHHHH
Confidence 665555688999999977665 5589999999999999987633222111100 0011 0111 3688999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHH---HH--HhcCCcHHHHHHHHHHHHHHHHc
Q 007224 544 STTVRRALATYGTQALAEMMKN---GM--AQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 544 a~~l~~ll~~~~~~~~~~~~~~---~~--~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
.+.-.++..| .+.+.++.++ .+ ..-|+-+..++.+++.|+.+...
T Consensus 659 ~~~a~~la~d--~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 659 EDIAVKLGTD--LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 9999999988 4444333322 22 24589999999999999999864
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.086 Score=54.34 Aligned_cols=111 Identities=12% Similarity=0.086 Sum_probs=73.4
Q ss_pred HHHHHhCCCCCCCCcE-EEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEE-ec
Q 007224 390 ALQAEVGLPVDRNIPV-IGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV-AK 465 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~-il~iGrl~~~Kg~--d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~-~~ 465 (612)
.+.++.|++.+ .++ ++..|.=.+.|.+ +.+.+++..+.+.+++++++|... ..+..+++....+...... +.
T Consensus 174 ~~l~~~g~~~~--~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~--e~~~~~~i~~~~~~~~~~l~g~ 249 (349)
T 3tov_A 174 EFYSSHGLTDT--DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPM--DLEMVQPVVEQMETKPIVATGK 249 (349)
T ss_dssp HHHHHTTCCTT--CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTT--THHHHHHHHHTCSSCCEECTTC
T ss_pred HHHHHcCCCCC--CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcc--hHHHHHHHHHhcccccEEeeCC
Confidence 34556677532 344 4556654456654 578888888866688999988654 3455666666554333333 34
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
.+-.++..+++.||++|..- .|..-+ |.++|+|+|+--.
T Consensus 250 ~sl~e~~ali~~a~~~i~~D----sG~~Hl-Aaa~g~P~v~lfg 288 (349)
T 3tov_A 250 FQLGPLAAAMNRCNLLITND----SGPMHV-GISQGVPIVALYG 288 (349)
T ss_dssp CCHHHHHHHHHTCSEEEEES----SHHHHH-HHTTTCCEEEECS
T ss_pred CCHHHHHHHHHhCCEEEECC----CCHHHH-HHhcCCCEEEEEC
Confidence 45566778999999999652 455555 8899999999753
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=95.99 E-value=0.028 Score=57.55 Aligned_cols=113 Identities=17% Similarity=0.173 Sum_probs=74.5
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcC-cccccCHH--HHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCC----Cce
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGR-LEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP----EKA 460 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGr-l~~~Kg~d--~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~----~~i 460 (612)
.+.+++.+|++.+ ...+++..|. ..+.|.+. .+.+++..|.+.+++++++|... ..+..+++....+ .++
T Consensus 167 ~~~~~~~~~~~~~-~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~--e~~~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 167 KSYTCNQFSLSSE-RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWC 243 (348)
T ss_dssp HHHHHHHTTCCSS-SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG--GHHHHHHHHTTSCHHHHTTE
T ss_pred HHHHHHHhCCCCC-CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChh--hHHHHHHHHHhhhhccccce
Confidence 4556777787532 2245556665 55667654 88888888876689999998654 2444555554432 124
Q ss_pred EEEe-ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 461 RGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 461 ~~~~-~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.... ..+-.+...+++.||++|... .|..-+ |.++|+|+|+--
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~lf 287 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVALY 287 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 3333 345566778999999999765 344444 899999999864
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.097 Score=59.60 Aligned_cols=231 Identities=11% Similarity=0.068 Sum_probs=120.6
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCc--cCCCCccccccccCcchhhcchHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQE--WNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~--~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~ 392 (612)
....|.+++.|+...+.+.+ .++.+.+ + ++.-|..-.. ++.. .....++.++
T Consensus 476 ~~~~D~~~~~s~~~~~~~~~--~f~~~~~------~--i~~~G~PR~D~l~~~~----------------~~~~~~~~~~ 529 (729)
T 3l7i_A 476 TSRWDYLISPNRYSTEIFRS--AFWMDEE------R--ILEIGYPRNDVLVNRA----------------NDQEYLDEIR 529 (729)
T ss_dssp HTTCSEEEESSHHHHHHHHH--HTCCCGG------G--EEESCCGGGHHHHHST----------------TCHHHHHHHH
T ss_pred hccCCEEEeCCHHHHHHHHH--HhCCCcc------e--EEEcCCCchHHHhccc----------------chHHHHHHHH
Confidence 44679999999999888875 3565533 2 3444443211 1111 1123366788
Q ss_pred HHhCCCCCCCCcEEEEEcCccccc----C-----HHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEE
Q 007224 393 AEVGLPVDRNIPVIGFIGRLEEQK----G-----SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 463 (612)
Q Consensus 393 ~~~gl~~~~~~~~il~iGrl~~~K----g-----~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~ 463 (612)
+++|++ +++++|+|.-.+.... | ...-++.+.+....++.+++-. ++.+...+. + ..+.+.+...
T Consensus 530 ~~~~~~--~~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~--Hp~~~~~~~-~-~~~~~~~~~~ 603 (729)
T 3l7i_A 530 THLNLP--SDKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRM--HYLISNALD-L-SGYENFAIDV 603 (729)
T ss_dssp HHTTCC--SSCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECC--CHHHHTTCC-C-TTCTTTEEEC
T ss_pred HHhCCC--CCCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEEec--Ccchhcccc-c-cccCCcEEeC
Confidence 999987 4568999987765431 1 1112333333323466666633 322211110 0 1122333333
Q ss_pred eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHH
Q 007224 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 464 ~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~l 543 (612)
... +...+++..||++|- -++-++.|++..++|+|.-... ..+... ...|+.+. +..+.----..|.++|
T Consensus 604 ~~~--~di~~ll~~aD~lIT-----DySSv~fD~~~l~kPiif~~~D-~~~Y~~-~~rg~y~d-~~~~~pg~~~~~~~eL 673 (729)
T 3l7i_A 604 SNY--NDVSELFLISDCLIT-----DYSSVMFDYGILKRPQFFFAYD-IDKYDK-GLRGFYMN-YMEDLPGPIYTEPYGL 673 (729)
T ss_dssp TTC--SCHHHHHHTCSEEEE-----SSCTHHHHHGGGCCCEEEECTT-TTTTTS-SCCSBSSC-TTSSSSSCEESSHHHH
T ss_pred CCC--cCHHHHHHHhCEEEe-----echHHHHhHHhhCCCEEEecCC-HHHHhh-ccCCcccC-hhHhCCCCeECCHHHH
Confidence 222 235568999999993 3778999999999999987321 112111 11233220 0000000013688999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHH
Q 007224 544 STTVRRALATYGTQALAEMMKNGMAQDLSW--KGPAKKWEETLLNLEV 589 (612)
Q Consensus 544 a~~l~~ll~~~~~~~~~~~~~~~~~~~~sw--~~~a~~~~~~y~~l~~ 589 (612)
.++|+..... ...+.+..++...+.+.+ ...+++..+.+.+...
T Consensus 674 ~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 674 AKELKNLDKV--QQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHHTTHHHH--HHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHHH
T ss_pred HHHHhhhhcc--chhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcCc
Confidence 9999988764 233333333333333333 3456666555544443
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.094 Score=52.41 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=60.8
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
.++++.|..+...-.+.+++++... .. -.+|.|.+.+. .+.+++...+.+ ++... .|..+ +.++|+.||++|.
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~--~~-i~vv~G~~~~~-~~~l~~~~~~~~-~v~v~-~~~~~-m~~~m~~aDlvI~ 231 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT--KI-ISIATSSSNPN-LKKLQKFAKLHN-NIRLF-IDHEN-IAKLMNESNKLII 231 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT--SC-EEEEECTTCTT-HHHHHHHHHTCS-SEEEE-ESCSC-HHHHHHTEEEEEE
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC--CC-EEEEECCCchH-HHHHHHHHhhCC-CEEEE-eCHHH-HHHHHHHCCEEEE
Confidence 3566778766554344555555433 22 44667887653 455555555444 35443 34333 5579999999997
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCC
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+ .|.++.|++++|+|.|.-..
T Consensus 232 ~-----gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 232 S-----ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp E-----SSHHHHHHHHTTCCEEEECC
T ss_pred C-----CcHHHHHHHHcCCCEEEEeC
Confidence 2 47899999999999998653
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=94.88 E-value=0.19 Score=53.77 Aligned_cols=134 Identities=13% Similarity=0.034 Sum_probs=79.3
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
.+++..|.+... ..+.+.+.+..+...+.+++++-.+.. ....-+.+..+.++++... .|-... .+++.+++-++
T Consensus 275 vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~~~-~~~lp~~~~~~~~~~~~vv-~w~Pq~--~vL~h~~v~~f 349 (454)
T 3hbf_A 275 VVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRGDP-KEKLPKGFLERTKTKGKIV-AWAPQV--EILKHSSVGVF 349 (454)
T ss_dssp EEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCSCH-HHHSCTTHHHHTTTTEEEE-SSCCHH--HHHHSTTEEEE
T ss_pred eEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCCcc-hhcCCHhHHhhcCCceEEE-eeCCHH--HHHhhcCcCeE
Confidence 456667776532 234444444444444667766543331 1111112222334445544 443332 58999996666
Q ss_pred CCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 484 PSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-++ +| .+++||+++|+|.|+-...+ ....+.+. +.|+.+. -..-+.+++.++|.+++++
T Consensus 350 vtH---~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~--------~~~~~~~~l~~av~~ll~~ 414 (454)
T 3hbf_A 350 LTH---SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD--------NGVLTKESIKKALELTMSS 414 (454)
T ss_dssp EEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG--------GGSCCHHHHHHHHHHHHSS
T ss_pred Eec---CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec--------CCCCCHHHHHHHHHHHHCC
Confidence 565 66 58999999999999986533 22344453 6787651 0135789999999999976
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=93.96 E-value=0.21 Score=53.48 Aligned_cols=132 Identities=11% Similarity=-0.010 Sum_probs=74.9
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEE-EeCCch-hHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hc
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GA 478 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvi-vG~g~~-~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~a 478 (612)
..+++..|.+... ..+.+.+++..+.+.++++++ +|.... ...+.+ ....+.++... .|-... .+++ .+
T Consensus 272 ~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~---~~~~~~~~~v~-~w~pq~--~vL~h~~~ 344 (456)
T 2c1x_A 272 SVVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGF---LEKTRGYGMVV-PWAPQA--EVLAHEAV 344 (456)
T ss_dssp CEEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTH---HHHHTTTEEEE-SCCCHH--HHHTSTTE
T ss_pred ceEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHH---HhhcCCceEEe-cCCCHH--HHhcCCcC
Confidence 3556667776543 334444444444333566654 443321 111111 11123345444 443332 4788 56
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|++|. + +-.++++||+++|+|.|+-...+ ....+.+. +.|+.+. -..-+.+++.++|++++++
T Consensus 345 ~~fvt--h--~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~--------~~~~~~~~l~~~i~~ll~~ 412 (456)
T 2c1x_A 345 GAFVT--H--CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE--------GGVFTKSGLMSCFDQILSQ 412 (456)
T ss_dssp EEEEE--C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG--------GGSCCHHHHHHHHHHHHHS
T ss_pred CEEEe--c--CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec--------CCCcCHHHHHHHHHHHHCC
Confidence 67773 3 23468999999999999986532 23344455 6787651 0124789999999999987
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=93.46 E-value=0.72 Score=49.54 Aligned_cols=132 Identities=6% Similarity=-0.088 Sum_probs=76.2
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCch------hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK------PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~------~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ 477 (612)
.+++..|.+.. ...+.+.+++..+.+.+.+++++-.... ...+ .+....+.++... .|-... .+++.
T Consensus 297 vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~---~~~~~~~~~~~v~-~~~pq~--~~L~h 369 (482)
T 2pq6_A 297 VVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSS---EFTNEIADRGLIA-SWCPQD--KVLNH 369 (482)
T ss_dssp EEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCH---HHHHHHTTTEEEE-SCCCHH--HHHTS
T ss_pred eEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcH---hHHHhcCCCEEEE-eecCHH--HHhcC
Confidence 45666777642 2334444444444444678776533210 0111 1222234445544 443333 38987
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----ccccee-cCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
+++-++-++ +-.++++||+++|+|+|+-...+ ....+. +-+.|+.+. ..-+.+++.++|++++.
T Consensus 370 ~~~~~~vth--~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~---------~~~~~~~l~~~i~~ll~ 438 (482)
T 2pq6_A 370 PSIGGFLTH--CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID---------TNVKREELAKLINEVIA 438 (482)
T ss_dssp TTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC---------SSCCHHHHHHHHHHHHT
T ss_pred CCCCEEEec--CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC---------CCCCHHHHHHHHHHHHc
Confidence 776444344 23468999999999999987543 222332 456677651 23578999999999998
Q ss_pred h
Q 007224 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
+
T Consensus 439 ~ 439 (482)
T 2pq6_A 439 G 439 (482)
T ss_dssp S
T ss_pred C
Confidence 7
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=93.31 E-value=1 Score=48.28 Aligned_cols=139 Identities=10% Similarity=-0.030 Sum_probs=77.0
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCch--------------hHHHHH-HHHHHHCCCceEEEeccC
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--------------PMEKQL-EQLEILYPEKARGVAKFN 467 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~--------------~~~~~l-~~l~~~~~~~i~~~~~~~ 467 (612)
..+++..|.+.. ...+.+.+.+..+...+.+++++-.... .....+ +.+.++..++-.....|-
T Consensus 269 ~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~ 347 (480)
T 2vch_A 269 SVLYVSFGSGGT-LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWA 347 (480)
T ss_dssp CEEEEECTTTCC-CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCC
T ss_pred ceEEEecccccC-CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCcc
Confidence 356677788753 2445555555555445677766533210 010000 011111111112222243
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccce-ecCceEEEecccccccCCCCCCCHH
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~l~~~~~~~~~~v~~~d~~ 541 (612)
... .+++.+++-++-++ +| ++++||+++|+|.|+--..+ ....+ .+-+.|+.+... .+ ..-+.+
T Consensus 348 Pq~--~vL~h~~v~~fvtH---gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~-~~----~~~~~~ 417 (480)
T 2vch_A 348 PQA--QVLAHPSTGGFLTH---CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG-DD----GLVRRE 417 (480)
T ss_dssp CHH--HHHHSTTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC-TT----SCCCHH
T ss_pred CHH--HHhCCCCcCeEEec---ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecc-cC----CccCHH
Confidence 332 58999997555455 55 58999999999999987543 23333 455667754100 00 034789
Q ss_pred HHHHHHHHHHH
Q 007224 542 AVSTTVRRALA 552 (612)
Q Consensus 542 ~la~~l~~ll~ 552 (612)
+++++|++++.
T Consensus 418 ~l~~av~~vl~ 428 (480)
T 2vch_A 418 EVARVVKGLME 428 (480)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999999997
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=91.32 E-value=3.1 Score=44.31 Aligned_cols=136 Identities=11% Similarity=0.072 Sum_probs=74.3
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc-hhHHHHHH-HHHHHCCCceEEEeccChHHHHHHHH--hc
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLE-QLEILYPEKARGVAKFNIPLAHMIIA--GA 478 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~-~~~~~~l~-~l~~~~~~~i~~~~~~~~~~~~~~l~--~a 478 (612)
..+++..|.+...-+.+.+.+++..+.+.+.+++++-... +.+.+.+. +... +.++... .|-... .+++ .+
T Consensus 277 ~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~--~~~~~v~-~w~pq~--~vL~h~~~ 351 (463)
T 2acv_A 277 SVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL--EGKGMIC-GWAPQV--EVLAHKAI 351 (463)
T ss_dssp CEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH--HCSEEEE-SSCCHH--HHHHSTTE
T ss_pred ceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc--CCCEEEE-ccCCHH--HHhCCCcc
Confidence 3566667777622233444444444434467776554322 11111111 1110 2234433 343332 3787 56
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccc-eecCceEEEec-ccccccCCCC--CCCHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMG-SFSVDCEAVD--PVDVAAVSTTVRRA 550 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~-v~~g~~G~l~~-~~~~~~~~v~--~~d~~~la~~l~~l 550 (612)
|++|. + +-.++++||+++|+|.|+-...+ .... +.+-+.|+.++ .+. -. ..+.+++.++|+++
T Consensus 352 ~~fvt--h--~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~-----~~~~~~~~~~l~~ai~~l 422 (463)
T 2acv_A 352 GGFVS--H--CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR-----KGSDVVAAEEIEKGLKDL 422 (463)
T ss_dssp EEEEE--C--CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC-----TTCCCCCHHHHHHHHHHH
T ss_pred CeEEe--c--CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccC-----CCCccccHHHHHHHHHHH
Confidence 66773 3 23468999999999999987533 2333 35556777641 000 01 34789999999999
Q ss_pred HH
Q 007224 551 LA 552 (612)
Q Consensus 551 l~ 552 (612)
++
T Consensus 423 l~ 424 (463)
T 2acv_A 423 MD 424 (463)
T ss_dssp TC
T ss_pred Hh
Confidence 96
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=89.32 E-value=1.3 Score=44.57 Aligned_cols=139 Identities=12% Similarity=0.100 Sum_probs=81.6
Q ss_pred cEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 404 PVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~--d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
.+++..|.=.+.|.+ +.+.+.+..+.+.++++++.+.++ ...+..+++....+. +...+..+-.+...+++.||++
T Consensus 180 ~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~-~e~~~~~~i~~~~~~-~~l~g~~sl~el~ali~~a~l~ 257 (326)
T 2gt1_A 180 YAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP-HEEERAKRLAEGFAY-VEVLPKMSLEGVARVLAGAKFV 257 (326)
T ss_dssp EEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH-HHHHHHHHHHTTCTT-EEECCCCCHHHHHHHHHTCSEE
T ss_pred EEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH-HHHHHHHHHHhhCCc-ccccCCCCHHHHHHHHHhCCEE
Confidence 345556654555654 488888888876788988874333 234445566554443 4333445566777899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec-CceEEEe-cccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQM-GSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~~G~l~-~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|..- .|..=+ |.++|+|+|+--....+..... +.....+ ++ .+| +..-+++++.+++.++++.
T Consensus 258 I~~D----SG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~--~~c--m~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 258 VSVD----TGLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP--GNE--LSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEES----SHHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECG--GGC--GGGCCHHHHHHHHHHTTTT
T ss_pred EecC----CcHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCC--ccc--ccCCCHHHHHHHHHHHHHH
Confidence 9653 355555 6779999998742222211111 1111111 11 011 2344778888888877764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 612 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 1e-100 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 5e-38 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 5e-09 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 2e-08 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 311 bits (796), Expect = e-100
Identities = 160/500 (32%), Positives = 236/500 (47%), Gaps = 34/500 (6%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKV 145
N+L V +E+ P KTGGL DV+G LP AL A+G R T+ P Y K A V
Sbjct: 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFT 61
Query: 146 GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 205
EK +D + +D P + + Y +TG+DY DN RF+ L
Sbjct: 62 DLLGEKADLLEVQHERLDLLILDAPAYYERS------GGPYLGQTGKDYPDNWKRFAALS 115
Query: 206 QAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 265
AA + P + A+DW ++ P Y++ P+ +
Sbjct: 116 LAAARIGAGVL---------PGWRPDMVHAHDWQAAMTPVYMRYAETPE-----IPSLLT 161
Query: 266 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325
IHNIA+QG+F F L LPA G ++++K G+ + + TVS
Sbjct: 162 IHNIAFQGQFGANIFSKLALPAHA-------FGMEGIEYYNDVSFLKGGLQTATALSTVS 214
Query: 326 PHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA 383
P YA+E+++ E G+ L+ +I R + GIVNG+D WNP TD I Y A +
Sbjct: 215 PSYAEEILTAE-FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSA-ANLKN 272
Query: 384 KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 443
+ L K+A+ + D P+ I RL QKG D++A A+ + +++VLG G
Sbjct: 273 RALNKKAVAEHFRID-DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDV 331
Query: 444 PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 503
+E L + + +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +
Sbjct: 332 ALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCI 391
Query: 504 PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEM 562
P+VA TGGL DTV + + PV + + +RR + Y L +M
Sbjct: 392 PVVARTGGLADTVIDANHAALASK-AATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQM 450
Query: 563 MKNGMAQDLSWKGPAKKWEE 582
K GM D+SW+ A +
Sbjct: 451 QKLGMKSDVSWEKSAGLYAA 470
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 144 bits (362), Expect = 5e-38
Identities = 102/503 (20%), Positives = 180/503 (35%), Gaps = 87/503 (17%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKV 145
+L +G E P K GGL + L + ALA+ GH V+ P + +++ + +V
Sbjct: 2 KVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKI----RV 56
Query: 146 GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 205
+ +V+ + + + + ++ V+ G + +
Sbjct: 57 FGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVY------------GPGWDGLIRKAVTFG 104
Query: 206 QAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 265
+A++ L DVV +DWHT +K +K VF
Sbjct: 105 RASVLLLNDLLREEPLP-------DVVH-FHDWHTVFAGALIKKYFKI-------PAVFT 149
Query: 266 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325
IH + AF + G ++ I+ G +D+V TVS
Sbjct: 150 IHRLNKSKLPAF---------------YFHEAGLSELAPYPDIDPEHTGGYIADIVTTVS 194
Query: 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 385
Y + + I + NG+D WN S + ++
Sbjct: 195 RGYLIDEWG--------FFRNFEGKITYVFNGIDCSFWNE------------SYLTGSRD 234
Query: 386 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL----AAAIPHFIKENVQIIVLGTG 441
K++L ++ G+ IG R QKG D+L + ++ I++G G
Sbjct: 235 ERKKSLLSKFGMDEGVTFMFIGRFDR--GQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG 292
Query: 442 KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG 501
+E LE + + + DF++IPS FEP GL+ L AM G
Sbjct: 293 DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 352
Query: 502 TVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561
+PI ++ GGL D + TG V D ++ + +AL L++
Sbjct: 353 AIPIASAVGGLRDIITNE-TGI----------LVKAGDPGELANAILKALELS-RSDLSK 400
Query: 562 MMKNG--MAQDLSWKGPAKKWEE 582
+N A SW+ A+++ +
Sbjct: 401 FRENCKKRAMSFSWEKSAERYVK 423
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 56.4 bits (135), Expect = 5e-09
Identities = 46/385 (11%), Positives = 104/385 (27%), Gaps = 86/385 (22%)
Query: 229 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ 288
+D++++ D+H L+ + ++ F +H
Sbjct: 123 DDIIWIH-DYHLLPFAHELRKRGV------NNRIGFFLHI-------------------P 156
Query: 289 FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK 348
F + F P + + + + D++ + + + + K
Sbjct: 157 FPTPEIFN---ALPTY----DTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK 209
Query: 349 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 408
+ G + IG++ A PL + Q + +N+ I
Sbjct: 210 SHT---AWGKAFRTEVY----PIGIEPKEIAKQAAGPLPPKLAQLK---AELKNVQNIFS 259
Query: 409 IGRLEEQKGSDILAAAIPHFIKENVQI---IVLGTGKKPMEKQLEQLEILYPEKARGVAK 465
+ RL+ KG A +++ Q I ++ + + + +
Sbjct: 260 VERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGR 319
Query: 466 FN-------------------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT---- 502
N L I +D L+ + L+ +
Sbjct: 320 INGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANP 379
Query: 503 -VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561
V +++ G + + V+P D V+ + RAL T
Sbjct: 380 GVLVLSQFAGAANELTSALI-------------VNPYDRDEVAAALDRAL-TMSLAERIS 425
Query: 562 MMKNGMAQDLSWKGPAKKWEETLLN 586
+ K W+E ++
Sbjct: 426 RHAEMLDV--IVKNDINHWQECFIS 448
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 52.5 bits (124), Expect = 2e-08
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 32/222 (14%)
Query: 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE-Q 415
G+D WN S + ++ K++L ++ G+ FIGR + Q
Sbjct: 1 GIDCSFWNE------------SYLTGSRDERKKSLLSKFGMDEG---VTFMFIGRFDRGQ 45
Query: 416 KGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471
KG D+L AI + ++ I++G G +E LE + +
Sbjct: 46 KGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFV 105
Query: 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 531
+ DF++IPS FEP GL+ L AM G +PI ++ GGL D +
Sbjct: 106 RELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNET----------- 154
Query: 532 CEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 573
V D ++ + +AL L++ +N + +S+
Sbjct: 155 GILVKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMSF 195
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 612 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.94 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.92 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.87 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 99.46 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 99.23 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 99.18 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.85 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.81 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.77 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.49 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.41 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.11 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.05 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.52 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.44 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.38 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 92.78 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 87.83 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 82.37 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=7.7e-60 Score=515.88 Aligned_cols=464 Identities=34% Similarity=0.547 Sum_probs=384.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||+||+.||+|+.++||+|+++.+|+++|+++||+|+||+|.|+..++.+................++.++...+|+++
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence 99999999999987899999999999999999999999999998876665443332211111112345667777889999
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+++++|.++.+ .+ .+|.+..+.+|.++..+|..+++++.++++.+.. .++|| |||+|+|++++.+
T Consensus 81 ~~l~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~pD-IvH~h~~~~~l~~ 145 (477)
T d1rzua_ 81 LILDAPAYYER-SG-----GPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLP--------GWRPD-MVHAHDWQAAMTP 145 (477)
T ss_dssp EEEECHHHHCS-SS-----CSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSS--------SCCCS-EEEEEHHHHTTHH
T ss_pred EEecChhhccc-CC-----CcccCcccccccccHHHHHHHHHHHHhhhhhccc--------CCCCC-EEEecchhHHHHH
Confidence 99999998876 33 4677778889999999999999998888776422 35799 9999999999999
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
.+++.... .++|+|+|+|+..+...++...+..++.+...... ..........+++..+..+|.++++
T Consensus 146 ~~~~~~~~-----~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ad~~~~v 213 (477)
T d1rzua_ 146 VYMRYAET-----PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGM-------EGIEYYNDVSFLKGGLQTATALSTV 213 (477)
T ss_dssp HHHHHSSS-----CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSST-------TTTEETTEEEHHHHHHHHCSEEEES
T ss_pred HHHHHhhC-----CCCCEEEEEecccccccCCHHHHHHhhcchhhccc-------ccccccchhHHHHHHHHhhhhhhhc
Confidence 88876542 68999999999988888887777776666544221 1111224567888899999999999
Q ss_pred CHHHHHHHHccccCCccchhhh--hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCC
Q 007224 325 SPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~ 402 (612)
|..+++++... .+|...+.+. +..++.+|+||+|.+.|+|...+.+..+++.... .....++..++...+++. ++
T Consensus 214 s~~~~~~~~~~-~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~ 290 (477)
T d1rzua_ 214 SPSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDD-DG 290 (477)
T ss_dssp CHHHHHHTTSH-HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCC-SS
T ss_pred cHHHHHHHHHH-hcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhH-HHhhhhHHHHHHhccccc-CC
Confidence 99999887641 2333333222 2358999999999999999988888888876654 555667778889999974 46
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
.++|+|+||++++||++.|++|++++.+.+.+++++|.|+......++++..++++++.+.+.++.++...++++||++|
T Consensus 291 ~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v 370 (477)
T d1rzua_ 291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAII 370 (477)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEE
T ss_pred ccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCcccc
Confidence 78999999999999999999999999888999999999998788888888888888899999999999989999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCc---------eEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF---------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~---------~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+||++|+||++++|||+||+|||+|++||++|+|.|+. +|+++ ++.|+++|+++|.++++.
T Consensus 371 ~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~----------~~~d~~~la~ai~~~l~~ 440 (477)
T d1rzua_ 371 IPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVRY 440 (477)
T ss_dssp ECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHHHHH
T ss_pred CCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEe----------CCCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999998875 89987 999999999999999985
Q ss_pred hC-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 554 YG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 554 ~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
++ ++.+++|++++++++|||+.++++|+++|++++
T Consensus 441 ~~~~~~~~~~~~~a~~~~fsw~~~a~~~~~lY~~ll 476 (477)
T d1rzua_ 441 YHDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLI 476 (477)
T ss_dssp HTCHHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHT
T ss_pred hCCHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 43 688999999999999999999999999999986
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=6.8e-46 Score=397.43 Aligned_cols=423 Identities=24% Similarity=0.339 Sum_probs=312.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
||||+|+.+|+|. ++||++++++.|+++|+++||+|+|+||.++..... ....+.+...............++.+
T Consensus 1 MkIl~~~~~~pP~-~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (437)
T d2bisa1 1 MKVLLLGFEFLPV-KVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGE----EIGKIRVFGEEVQVKVSYEERGNLRI 75 (437)
T ss_dssp CEEEEECSCCTTC-CSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCE----EEEEEECSSSEEEEEEEEEEETTEEE
T ss_pred CEEEEECCccCCc-ccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccchh----hccceeecccccceeeeeeccCCeEE
Confidence 9999999999885 679999999999999999999999999987765432 22333333333445555566678888
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.+..+.+... ..|.+ .+.....++..+++.....+..+... ...|| |||+|+|.+++++
T Consensus 76 ~~~~~~~~~~~--------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~pD-iIh~~~~~~~~~~ 135 (437)
T d2bisa1 76 YRIGGGLLDSE--------DVYGP----GWDGLIRKAVTFGRASVLLLNDLLRE-------EPLPD-VVHFHDWHTVFAG 135 (437)
T ss_dssp EEEESSGGGCS--------CTTCS----HHHHHHHHHHHHHHHHHHHHHHHTTS-------SCCCS-EEEEETGGGHHHH
T ss_pred EecCccccccc--------ccccc----chhhHHHHHHHHHHHHHHHHHHHHhc-------CCCCC-EEEECChhhhhHh
Confidence 88876543221 22221 12223334455666665555554221 12589 9999999998888
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
.+++.. .++|+++++|+..+. .++...+...+++... .......++.....+|.++++
T Consensus 136 ~~~~~~-------~~~~~v~~~h~~~~~-~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~d~v~~~ 193 (437)
T d2bisa1 136 ALIKKY-------FKIPAVFTIHRLNKS-KLPAFYFHEAGLSELA--------------PYPDIDPEHTGGYIADIVTTV 193 (437)
T ss_dssp HHHHHH-------HCCCEEEEESSCCCC-CEEHHHHHHTTCGGGC--------------CSSEECHHHHHHHHSSEEEES
T ss_pred hhhhcc-------ccCceeEEEeecccc-ccchhhhhhccchhhh--------------hHHHHHHHHHHHHhhhhhccc
Confidence 887766 489999999987652 2221112222221111 123345667788899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
++....+... .++.. ..++.+|+||+|.+.|.|... ...+...+..++.++++. +.+
T Consensus 194 ~~~~~~~~~~--~~~~~------~~ki~vi~~g~d~~~~~~~~~------------~~~~~~~~~~~~~~~~~~---~~~ 250 (437)
T d2bisa1 194 SRGYLIDEWG--FFRNF------EGKITYVFNGIDCSFWNESYL------------TGSRDERKKSLLSKFGMD---EGV 250 (437)
T ss_dssp CHHHHHHTHH--HHGGG------TTTEEECCCCCCTTTSCGGGC------------CSCHHHHHHHHHHHTTCC---SCE
T ss_pred chhhhhhhhh--hhccc------cCceEEEeccccccccccccc------------chhhHHHHHhhhhhhhcc---CCc
Confidence 9988876553 12222 238999999999998876432 123445567788888875 457
Q ss_pred EEEEEcCcc-cccCHHHHHHHHHhccc----CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 405 VIGFIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 405 ~il~iGrl~-~~Kg~d~ll~a~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
+|+|+||+. ++||++.+++|+..+.. ++++|+|+|.|+...+..++.+....+.........+.+.+..+++.||
T Consensus 251 ~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 330 (437)
T d2bisa1 251 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVD 330 (437)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEECSCCCHHHHHHHHTTCS
T ss_pred eEEEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccccccceeccccCcHHHHHHHHhhhc
Confidence 999999997 57999999999998743 5899999999987778888888777776555444557888889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~ 559 (612)
++++||..|++|++++|||+||+|||+|+.||..|++.+ .+|+++ ++.|+++++++|.+++++. ++.+
T Consensus 331 i~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~----------~~~d~~~la~~i~~ll~~~-~~~~ 398 (437)
T d2bisa1 331 FVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILV----------KAGDPGELANAILKALELS-RSDL 398 (437)
T ss_dssp EEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEE----------CTTCHHHHHHHHHHHHTTT-TSCT
T ss_pred cccccccccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEE----------CCCCHHHHHHHHHHHHhCC-HHHH
Confidence 999999999999999999999999999999999999986 489987 9999999999999999742 3444
Q ss_pred HHHHHHH--HHhcCCcHHHHHHHHHHHHHHHH
Q 007224 560 AEMMKNG--MAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 560 ~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
++|++++ ..++|||+.++++|+++|++++.
T Consensus 399 ~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~ 430 (437)
T d2bisa1 399 SKFRENCKKRAMSFSWEKSAERYVKAYTGSID 430 (437)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 5555554 34679999999999999998874
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-35 Score=305.81 Aligned_cols=228 Identities=14% Similarity=0.183 Sum_probs=181.8
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhC
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 396 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g 396 (612)
.++.+++.+....+.+.+ .++.+.+ ++.+|+||+|++.+.+... +..++.++..+|
T Consensus 135 ~~~~~~~~~~~~~~~~~~--~~~~~~~------~i~vi~~gv~~~~~~~~~~----------------~~~~~~~r~~~~ 190 (370)
T d2iw1a1 135 KSTKLMMLTDKQIADFQK--HYQTEPE------RFQILPPGIYPDRKYSEQI----------------PNSREIYRQKNG 190 (370)
T ss_dssp CCCEEEESCHHHHHHHHH--HHCCCGG------GEEECCCCCCGGGSGGGSC----------------TTHHHHHHHHTT
T ss_pred cCceEEEecHHHHHHHHH--hcCCCcc------eEEEEEeecccccccccCc----------------hhhhhhhhhccC
Confidence 578999999988888765 2455544 8999999999887644321 223677889999
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHH
Q 007224 397 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAH 472 (612)
Q Consensus 397 l~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~ 472 (612)
++. +.++++++||+.++||++.+++|+.++.+ ++..++++|.++. .+.++++.++++ +++.+.+.. +.+.
T Consensus 191 ~~~--~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~--~~~~~~~~~~~~~~~~v~~~g~~--~~~~ 264 (370)
T d2iw1a1 191 IKE--QQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDK--PRKFEALAEKLGVRSNVHFFSGR--NDVS 264 (370)
T ss_dssp CCT--TCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--CHHHHHHHHHHTCGGGEEEESCC--SCHH
T ss_pred CCc--cceEEEEEeccccccchhhhcccccccccccccceeeecccccc--ccccccccccccccccccccccc--cccc
Confidence 874 45899999999999999999999999976 5667766666542 234555555443 356655533 3466
Q ss_pred HHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 473 ~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
++|+.||++|+||..|+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++.|+++++++|.++++
T Consensus 265 ~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~---------~~~~d~~~la~~i~~ll~ 335 (370)
T d2iw1a1 265 ELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI---------AEPFSQEQLNEVLRKALT 335 (370)
T ss_dssp HHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE---------CSSCCHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccceeeecccCCeeEEEeCCCChHHHhcCCCceEEE---------cCCCCHHHHHHHHHHHHc
Confidence 79999999999999999999999999999999999999999999999999865 378899999999999999
Q ss_pred hhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 553 ~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~ 585 (612)
| ++.+.+|++++. .+.|+|..+.+++.++|.
T Consensus 336 d--~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 336 Q--SPLRMAWAENARHYADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp C--HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHHHhChhHHHHHHHHHHh
Confidence 8 777888887773 567888888888888875
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.94 E-value=5e-26 Score=217.20 Aligned_cols=189 Identities=28% Similarity=0.453 Sum_probs=157.3
Q ss_pred CCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcc-cccCHHHHHHHHHhccc----C
Q 007224 357 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK----E 431 (612)
Q Consensus 357 gvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~-~~Kg~d~ll~a~~~l~~----~ 431 (612)
|||++.|.|.... ..+...+..+++++|++ +.++|+|+||+. ++||++.++++++.+.+ +
T Consensus 1 gid~~~~~~~~~~------------~~~~~~~~~~~~~~~l~---~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~ 65 (196)
T d2bfwa1 1 GIDCSFWNESYLT------------GSRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ 65 (196)
T ss_dssp CCCTTTSSGGGSC------------SCHHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG
T ss_pred CcChhhcCCCCCC------------chhHHHHHHHHHHhCCC---CCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCC
Confidence 7899999775321 23455677899999996 557899999997 69999999999998853 5
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 511 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg 511 (612)
+++|+|+|+|.+.++..++.+...+.+.+......+.+.+..+|+.||++|+||+.|+||++++|||+||+|||+++.|+
T Consensus 66 ~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~ 145 (196)
T d2bfwa1 66 EMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG 145 (196)
T ss_dssp GEEEEEECCBCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHH
T ss_pred CeEEEEEeecccchhhhhhhhhhccceeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCc
Confidence 89999999998778888888888877655555555778888999999999999999999999999999999999999999
Q ss_pred cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCC
Q 007224 512 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLS 572 (612)
Q Consensus 512 ~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~s 572 (612)
+.|++.+ .+|+++ ++.|+++++++|.+++.. .++.+.++++++. +.+||
T Consensus 146 ~~e~i~~-~~g~~~----------~~~~~~~l~~~i~~~l~~-~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 146 LRDIITN-ETGILV----------KAGDPGELANAILKALEL-SRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp HHHHCCT-TTCEEE----------CTTCHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHTC
T ss_pred cceeecC-CceeeE----------CCCCHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhCC
Confidence 9999865 589988 999999999999999974 2566777777764 34454
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=2.5e-23 Score=223.66 Aligned_cols=311 Identities=14% Similarity=0.104 Sum_probs=216.3
Q ss_pred HHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCccc-
Q 007224 201 FSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED- 279 (612)
Q Consensus 201 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~- 279 (612)
|..+.+...+.+..+ +++|.+|+.||++..++|.+++... .++++.|.+|.. ||...
T Consensus 105 Y~~vN~~fA~~l~~~-----------~~~~d~iwvhDyhl~llp~~lR~~~------~~~~i~~flH~p-----fP~~~~ 162 (456)
T d1uqta_ 105 YLRVNALLADKLLPL-----------LQDDDIIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIP-----FPTPEI 162 (456)
T ss_dssp HHHHHHHHHHHHGGG-----------CCTTCEEEEESGGGTTHHHHHHHTT------CCSCEEEECCSC-----CCCHHH
T ss_pred HHHHHHHHHHHHHHh-----------ccCCCeEEEeccchhhhHHHHHHhC------CCCcEEEEeCCC-----CCChHH
Confidence 555555555555443 2354499999999999999999875 688999999943 22111
Q ss_pred ccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccc--cCCccch--hh----hhccCe
Q 007224 280 FGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELD--NI----IRKTGI 351 (612)
Q Consensus 280 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~--~~----~~~~~i 351 (612)
+..+ .....+..++..+|.|.+.+..+++.+.... ..+.+.. .. -+..++
T Consensus 163 fr~l----------------------p~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v 220 (456)
T d1uqta_ 163 FNAL----------------------PTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRT 220 (456)
T ss_dssp HTTS----------------------TTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEE
T ss_pred hccC----------------------cchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeee
Confidence 1100 1224456678899999999988887664310 1111100 00 012468
Q ss_pred EEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-
Q 007224 352 KGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK- 430 (612)
Q Consensus 352 ~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~- 430 (612)
.++|+|+|++.|.+.... . .......++.+.+ ++++|+++||+++.||++.+++|++++.+
T Consensus 221 ~~~p~GID~~~~~~~~~~------------~-~~~~~~~l~~~~~-----~~~~il~V~Rld~~KGi~~~l~A~~~~l~~ 282 (456)
T d1uqta_ 221 EVYPIGIEPKEIAKQAAG------------P-LPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEK 282 (456)
T ss_dssp EECCCCCCHHHHHHHHHS------------C-CCHHHHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHH
T ss_pred eeecCcccchhhhhhccc------------H-HHHHHHHHHHhcC-----CCeEEEEeCCCchhhchHHHHHHHHHHHHh
Confidence 899999999887542111 0 1112334555543 56899999999999999999999999865
Q ss_pred -C----CcEEEEEeCCc----h---hHHHHHHHHHHH----C-----CCceEEEeccChHHHHHHHHhcCEEEeCCCCCC
Q 007224 431 -E----NVQIIVLGTGK----K---PMEKQLEQLEIL----Y-----PEKARGVAKFNIPLAHMIIAGADFILIPSRFEP 489 (612)
Q Consensus 431 -~----~~~lvivG~g~----~---~~~~~l~~l~~~----~-----~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~ 489 (612)
+ ++.|+++|.+. . .+..++.++..+ + ...+......+.+.+..+|+.||++++||..||
T Consensus 283 ~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG 362 (456)
T d1uqta_ 283 YPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDG 362 (456)
T ss_dssp CGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBS
T ss_pred CccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCC
Confidence 2 57788888754 1 233344444332 2 122334445577888899999999999999999
Q ss_pred CcHHHHHHHHcCCc-----eEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007224 490 CGLIQLHAMRYGTV-----PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 564 (612)
Q Consensus 490 ~gl~~lEAma~G~P-----vI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~ 564 (612)
||++.+|||+||+| +|+|+.+|..+.+.+ |+++ +|.|++++|++|.++++++ ++++.++.+
T Consensus 363 ~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~~---g~lV----------nP~d~~~~A~ai~~aL~~~-~~er~~~~~ 428 (456)
T d1uqta_ 363 MNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS---ALIV----------NPYDRDEVAAALDRALTMS-LAERISRHA 428 (456)
T ss_dssp CCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTT---SEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHH
T ss_pred CCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhCC---eEEE----------CcCCHHHHHHHHHHHHcCC-HHHHHHHHH
Confidence 99999999999999 899999999999964 7877 9999999999999999863 344444444
Q ss_pred HH--HHhcCCcHHHHHHHHHHHHHH
Q 007224 565 NG--MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 565 ~~--~~~~~sw~~~a~~~~~~y~~l 587 (612)
++ ....||+...++.+++-++++
T Consensus 429 ~~~~~v~~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 429 EMLDVIVKNDINHWQECFISDLKQI 453 (456)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHhh
Confidence 44 235789988888888877764
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.87 E-value=1.1e-21 Score=181.77 Aligned_cols=138 Identities=15% Similarity=0.225 Sum_probs=121.6
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc--hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
..++|+||+.++||++.+++|++++ ++.+++|+|.+. +..+...+++.....+++.+.+..+.+.+..+|+.||++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l--~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~ 90 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGL 90 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh--cCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccc
Confidence 4588999999999999999999998 578899999765 334555555555556679888888999999999999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
|+||+.|+||++++|||+||+|||+++.++..|++.++.+|+++ + .|+++++++|.++++++
T Consensus 91 i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~----------~-~d~~~~~~~i~~l~~~~ 152 (166)
T d2f9fa1 91 LCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV----------N-ADVNEIIDAMKKVSKNP 152 (166)
T ss_dssp EECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE----------C-SCHHHHHHHHHHHHHCT
T ss_pred ccccccccccccccccccccccceeecCCcceeeecCCcccccC----------C-CCHHHHHHHHHHHHhCH
Confidence 99999999999999999999999999999999999999999975 4 58999999999999984
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=99.46 E-value=1.1e-11 Score=137.25 Aligned_cols=294 Identities=16% Similarity=0.154 Sum_probs=187.1
Q ss_pred CcEEEEecCCccchHHHHHHHhh-cCCCC-------CCCceEEEEEecCcccc--cCCcccccccCCCcc----------
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMY-KPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQ---------- 288 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~-~~~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~~l~~~---------- 288 (612)
++ ++|.|+-|++++..-+-+.+ ...|+ .....++||.|.+.+.| +|+.+.+..+ +|..
T Consensus 300 ~~-vihlNEgHpafai~El~R~l~d~~gl~~~~A~e~vr~~~~fTtHTpvpag~e~fp~~li~~~-l~~~~~~i~~i~~~ 377 (796)
T d1l5wa_ 300 YE-VIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGL-LPRHMQIINEINTR 377 (796)
T ss_dssp HE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred hh-hhhcccchHHHHHHHHHHHHHHhcCCCHHHHHHHhhceEEEeccCCchhhccccCHHHHHHH-hHHHHHHHhHhhHH
Confidence 56 99999999988766554432 12121 12457899999886655 3443333211 0100
Q ss_pred cccccccccCCC-------CCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccC
Q 007224 289 FKSSFDFIDGYN-------KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ 361 (612)
Q Consensus 289 ~~~~~~~~~~~~-------~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~ 361 (612)
+........+.+ ........++-..++..+..+..||+-..+.+.+.. +.. .. -+-+.++..|.|||.+.
T Consensus 378 fl~~~~~~~~~d~~~~~~~~~~~~~~~~Ma~LAl~~S~~vNGVSklH~ev~~~~~-~~~-~~-~~~p~~i~~ITNGVh~~ 454 (796)
T d1l5wa_ 378 FKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDL-FPE-YH-QLWPNKFHNVTNGITPR 454 (796)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTT-SHH-HH-HHCGGGEEECCCCBCHH
T ss_pred HHHHHHHHCCCcHHHHhhhchhcccccchHHHHHHhhhhhHHHHHHHHHHHHHHh-hhh-cc-ccCCcccccccccccHH
Confidence 000000000000 001123456777788999999999998888666411 110 00 01134899999999998
Q ss_pred ccCCCCcc--------cccc-------------ccCc-----chhhcchHHHH----HHHHHHhCCCCCCCCcEEEEEcC
Q 007224 362 EWNPLTDK--------YIGV-------------KYDA-----STVMDAKPLLK----EALQAEVGLPVDRNIPVIGFIGR 411 (612)
Q Consensus 362 ~~~p~~~~--------~~~~-------------~~~~-----~~~~~~~~~~k----~~l~~~~gl~~~~~~~~il~iGr 411 (612)
.|-....+ ++.. ++.. ..+.+.+..+| +.++.+.|...+++...++|+-|
T Consensus 455 ~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRR 534 (796)
T d1l5wa_ 455 RWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKR 534 (796)
T ss_dssp HHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESC
T ss_pred HHHhhhCHHHHHHHHhhcccccccCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhhh
Confidence 88422111 0000 0000 11222333333 34566778888899999999999
Q ss_pred cccccCHHHHHHHHH----hccc------CCcEEEEEeCCch------hHHHHHHHHHHH---CC-----CceEEEeccC
Q 007224 412 LEEQKGSDILAAAIP----HFIK------ENVQIIVLGTGKK------PMEKQLEQLEIL---YP-----EKARGVAKFN 467 (612)
Q Consensus 412 l~~~Kg~d~ll~a~~----~l~~------~~~~lvivG~g~~------~~~~~l~~l~~~---~~-----~~i~~~~~~~ 467 (612)
+.++|+.++++.-+. .+.. .+++|++.|+..+ .+-+.+.+++.. .+ .++.++..++
T Consensus 535 fa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYd 614 (796)
T d1l5wa_ 535 LHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYC 614 (796)
T ss_dssp CCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCC
T ss_pred hhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCc
Confidence 999999998544433 3322 2689999999653 223333333331 11 1588888899
Q ss_pred hHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEecc
Q 007224 468 IPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGS 527 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~~ 527 (612)
..++..++.+||+.+..|+. |++|++-+-||..|.+.+++-.|...|+.++ ++|||+||.
T Consensus 615 v~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG~ 678 (796)
T d1l5wa_ 615 VSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGH 678 (796)
T ss_dssp HHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC
T ss_pred hHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEecC
Confidence 99999999999999999975 9999999999999999999999999998875 789999984
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.23 E-value=2.1e-10 Score=126.97 Aligned_cols=295 Identities=19% Similarity=0.156 Sum_probs=189.0
Q ss_pred CcEEEEecCCccchHHHHHHHhh-cCCCC-------CCCceEEEEEecCcccc--cCCcccccccCCCc----------c
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMY-KPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------Q 288 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~-~~~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~~l~~----------~ 288 (612)
+. ++|+||-|++++..-+-+.+ ...|+ .....++||.|.+.+.+ .|+.+.+..+ +|. .
T Consensus 321 ~~-vihlNegHpa~ai~ElmR~l~d~~gl~~d~A~e~v~~~~~fTtHTpvpag~E~f~~~l~~~~-lpr~~~ii~ei~~~ 398 (824)
T d2gj4a1 321 KV-AIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETL-LPRHLQIIYEINQR 398 (824)
T ss_dssp HE-EEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred cc-eeeccCCccHhHHHHHHHHHHHhcCCCHHHHHHHhhceEEEEeccCchHhcCccCHHHHHHH-hHHHhhhhhhhHHH
Confidence 44 89999999988776555433 22221 11346899999886655 3444333221 010 0
Q ss_pred cccccccccC----------CCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC
Q 007224 289 FKSSFDFIDG----------YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 358 (612)
Q Consensus 289 ~~~~~~~~~~----------~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv 358 (612)
|.....-..+ ....-.....++-..++..+..+..||+-..+.+.+.... + -.-+-+.++.-|.|||
T Consensus 399 fl~~~~~~~~~d~~~~~~l~ii~e~~~~~~~Ma~Lal~~S~~vNGVSklH~ev~~~~~~~--~-~~~~~p~ki~~iTNGV 475 (824)
T d2gj4a1 399 FLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFK--D-FYELEPHKFQNKTNGI 475 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTH--H-HHHHCGGGEEECCCCB
T ss_pred HHHHHHHHCCCcHHHHhhcccccccCCceeeHHHHHHHhchhHHHHHHHHHHHHHHhhcc--c-cccCCCcceecccCcc
Confidence 0000000000 0000011345677778999999999999888877652110 0 0011234899999999
Q ss_pred ccCccCCCCcccccc---------------------cc-Cc----chhhcchHHHHH----HHHHHhCCCCCCCCcEEEE
Q 007224 359 DVQEWNPLTDKYIGV---------------------KY-DA----STVMDAKPLLKE----ALQAEVGLPVDRNIPVIGF 408 (612)
Q Consensus 359 d~~~~~p~~~~~~~~---------------------~~-~~----~~~~~~~~~~k~----~l~~~~gl~~~~~~~~il~ 408 (612)
.+..|-....+.+.. .+ +. ..+.+.+..+|. .++++.|...+++...++|
T Consensus 476 ~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~ 555 (824)
T d2gj4a1 476 TPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQ 555 (824)
T ss_dssp CTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEE
T ss_pred cCccchhccCHHHHHHHHhhhccccccCHHHHHHHHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhhh
Confidence 999885321111100 01 00 012233333443 3566778888899999999
Q ss_pred EcCcccccCHHHH----HHHHHhccc------CCcEEEEEeCCchh------HHHHHHHHHH---HCC-----CceEEEe
Q 007224 409 IGRLEEQKGSDIL----AAAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEI---LYP-----EKARGVA 464 (612)
Q Consensus 409 iGrl~~~Kg~d~l----l~a~~~l~~------~~~~lvivG~g~~~------~~~~l~~l~~---~~~-----~~i~~~~ 464 (612)
+-|+.++|+..+. +..+.++++ .++++++.|+..+. +-+.+-+++. ..+ .++.+..
T Consensus 556 arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFle 635 (824)
T d2gj4a1 556 VKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE 635 (824)
T ss_dssp ESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEET
T ss_pred eeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeEEEcC
Confidence 9999999999883 333344433 37899999996532 2233333333 111 2578888
Q ss_pred ccChHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEeccc
Q 007224 465 KFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSF 528 (612)
Q Consensus 465 ~~~~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~~~ 528 (612)
.++..++..++.+||+.+..|+. |++|++-+-+|..|.+.+++-.|...|+.++ +.|||+||..
T Consensus 636 nY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~~ 703 (824)
T d2gj4a1 636 NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR 703 (824)
T ss_dssp TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC
T ss_pred CCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeCCC
Confidence 99999999999999999999975 9999999999999999999999999998875 7899999854
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.85 E-value=1e-07 Score=97.04 Aligned_cols=82 Identities=21% Similarity=0.146 Sum_probs=58.4
Q ss_pred CCceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccceecCceEEEeccc
Q 007224 457 PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSF 528 (612)
Q Consensus 457 ~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~l~~~~ 528 (612)
+.++......+. ..++..+|++|..+ -..++.|||++|+|+|+....+ ..+.+.+.+.|+.+.
T Consensus 269 ~~~v~i~~~~p~---~~ll~~a~~~v~hg----G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~-- 339 (391)
T d1pn3a_ 269 GADCFVVGEVNL---QELFGRVAAAIHHD----SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVD-- 339 (391)
T ss_dssp CTTCCEESSCCH---HHHHTTSSCEEEES----CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEEC--
T ss_pred CCCEEEecccCH---HHHHhhccEEEecC----chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcC--
Confidence 345655555443 24789999999654 3478999999999999986543 345566667788761
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 529 SVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 529 ~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
...-++++++++|++++++
T Consensus 340 ------~~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 340 ------GPVPTIDSLSAALDTALAP 358 (391)
T ss_dssp ------CSSCCHHHHHHHHHHHTST
T ss_pred ------cCCCCHHHHHHHHHHHhCH
Confidence 1223589999999999964
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.81 E-value=7.9e-08 Score=98.30 Aligned_cols=81 Identities=14% Similarity=0.129 Sum_probs=60.3
Q ss_pred CCCceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccc
Q 007224 456 YPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVD 531 (612)
Q Consensus 456 ~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~ 531 (612)
.+.++.....++.. .++..+|++|. .+-..++.||+++|+|+|+....+ ..+.+.+.+.|..+
T Consensus 284 ~~~~v~~~~~~p~~---~ll~~~~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l------ 350 (401)
T d1rrva_ 284 DRDDCFAIDEVNFQ---ALFRRVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH------ 350 (401)
T ss_dssp CCTTEEEESSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC------
T ss_pred CCCCEEEEeccCcH---HHhhhccEEEe----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEc------
Confidence 34556655554432 47899999994 566789999999999999987655 45556666678876
Q ss_pred cCCCCC--CCHHHHHHHHHHHHHh
Q 007224 532 CEAVDP--VDVAAVSTTVRRALAT 553 (612)
Q Consensus 532 ~~~v~~--~d~~~la~~l~~ll~~ 553 (612)
+. -++++|+++|++++++
T Consensus 351 ----~~~~~~~~~L~~ai~~vl~~ 370 (401)
T d1rrva_ 351 ----DGPTPTFESLSAALTTVLAP 370 (401)
T ss_dssp ----SSSCCCHHHHHHHHHHHTSH
T ss_pred ----CcCCCCHHHHHHHHHHHhCH
Confidence 44 3589999999999953
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.77 E-value=4.2e-07 Score=91.22 Aligned_cols=161 Identities=11% Similarity=0.030 Sum_probs=86.4
Q ss_pred cEEEEE-cCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 404 PVIGFI-GRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~il~i-Grl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
..++.+ |......-.+.+.+.+..+.. ....++++............. ...+.++.. ..|..+ .+++++.||++|
T Consensus 178 ~~i~~~~gs~g~~~~~~~~~~~~~~l~~-~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~v-~~f~~~-~~~lm~~adl~I 253 (351)
T d1f0ka_ 178 VRVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGSQQSVEQAYA-EAGQPQHKV-TEFIDD-MAAAYAWADVVV 253 (351)
T ss_dssp EEEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTCHHHHHHHHH-HTTCTTSEE-ESCCSC-HHHHHHHCSEEE
T ss_pred cccccccccchhhhhHHHHHHhhhhhcc-cceeeeeccccchhhhhhhhc-cccccccee-eeehhh-HHHHHHhCchhh
Confidence 444444 444333334555566666533 333444444433223233322 223333332 334433 456899999998
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCC---C----cccceecCceEEEecccccccCCCCC--CCHHHHHHHHHHHHHh
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTG---G----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRALAT 553 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~g---g----~~e~v~~g~~G~l~~~~~~~~~~v~~--~d~~~la~~l~~ll~~ 553 (612)
.- +-+.++.||+++|+|+|+.... + ..+.+.+-+.|+.+ +. -+.+.+.++|..+
T Consensus 254 t~----~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~----------~~~~~~~e~l~~~l~~l--- 316 (351)
T d1f0ka_ 254 CR----SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKII----------EQPQLSVDAVANTLAGW--- 316 (351)
T ss_dssp EC----CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHTC---
T ss_pred cc----ccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEe----------chhhCCHHHHHHHHHhh---
Confidence 42 3448899999999999986432 2 23445556678765 32 2467777776664
Q ss_pred hCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
.++.+.+|++++... .-.+.+++..+.++++.
T Consensus 317 -~~~~~~~~~~~~~~~--~~~~~a~~i~~~i~~l~ 348 (351)
T d1f0ka_ 317 -SRETLLTMAERARAA--SIPDATERVANEVSRVA 348 (351)
T ss_dssp -CHHHHHHHHHHHHHT--CCTTHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHcc--CCccHHHHHHHHHHHHH
Confidence 245677787776532 22223444444444443
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.49 E-value=4.9e-06 Score=84.16 Aligned_cols=124 Identities=15% Similarity=0.086 Sum_probs=75.3
Q ss_pred cEEEEEcCcc-cccCHHHHHHHHHhcccCCcEEEEE-eCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 404 PVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~il~iGrl~-~~Kg~d~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
.++...|... ..+..+.+++++..+ +..++++ |..... ....+.++......+. ..++..+|++
T Consensus 240 ~i~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~~--------~~~~~~nv~~~~~~p~---~~~l~~~~~~ 305 (401)
T d1iira_ 240 PVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLV--------LPDDGADCFAIGEVNH---QVLFGRVAAV 305 (401)
T ss_dssp CEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCC--------CSSCGGGEEECSSCCH---HHHGGGSSEE
T ss_pred eEEEccCccccchHHHHHHHHHHHHc---CCeEEEeccCCccc--------cccCCCCEEEEeccCH---HHHHhhcCEE
Confidence 3444444433 345556666666655 3333333 332210 1112344655544443 2478999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
| ..+...++.||+++|+|+|+....+ ..+.+.+.+.|..+. .+..++++++++|.+++++
T Consensus 306 V----~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~--------~~~~~~~~l~~ai~~~l~~ 369 (401)
T d1iira_ 306 I----HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHD--------GPIPTFDSLSAALATALTP 369 (401)
T ss_dssp E----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS--------SSSCCHHHHHHHHHHHTSH
T ss_pred E----ecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcC--------cCCCCHHHHHHHHHHHhCH
Confidence 9 3577789999999999999975443 444555656788761 1223699999999999964
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.41 E-value=0.00014 Score=73.96 Aligned_cols=222 Identities=14% Similarity=0.057 Sum_probs=143.8
Q ss_pred HHHHHHH-hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCC-CccCccCCCCccccccccCcchhhcchHHH
Q 007224 310 WMKAGIL-ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 310 ~~k~~~~-~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
..|..+. .|+.-++.++..++.+.+ .|.+.. +|.++-|. +|. ..
T Consensus 135 ~~R~~iskls~~hf~~t~~~~~~L~~---~Ge~~~------~I~~vG~p~~D~-------------------------i~ 180 (373)
T d1v4va_ 135 ANRRLTDVLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDA-------------------------VL 180 (373)
T ss_dssp HHHHHHHHHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHH-------------------------HH
T ss_pred hhhhhhccccceeeecchhhhhhhhh---hccccc------ceeecccchhhH-------------------------HH
Confidence 3444444 789999999999999997 787765 66655542 210 00
Q ss_pred HHH-H-HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEE
Q 007224 388 KEA-L-QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 463 (612)
Q Consensus 388 k~~-l-~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~ 463 (612)
... + +.....+ ++...++.+-|-+..+....+.+++..+.+ .++.+++.............+..... .++...
T Consensus 181 ~~~~~~~~~~~~~--~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~-~n~~~~ 257 (373)
T d1v4va_ 181 LAAKLGRLPEGLP--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGV-RNFVLL 257 (373)
T ss_dssp HHHHHCCCCTTCC--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTC-TTEEEE
T ss_pred hhhhhcccccccc--cccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhccc-ccceee
Confidence 111 0 1111222 244567777787777777788888877765 57777776555544444444443333 357777
Q ss_pred eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CCCcccceecCceEEEecccccccCCCCCCCHHH
Q 007224 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 464 ~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 542 (612)
..+.....-.+++.|++++- ..|..+.||..+|+|+|.-. .|.-.+.+..|.+ ++ ...|.++
T Consensus 258 ~~l~~~~~l~ll~~s~~vig-----nSssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vl-----------v~~d~~~ 320 (373)
T d1v4va_ 258 DPLEYGSMAALMRASLLLVT-----DSGGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KL-----------AGTDPEG 320 (373)
T ss_dssp CCCCHHHHHHHHHTEEEEEE-----SCHHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EE-----------CCSCHHH
T ss_pred ccchHHHHHHHhhhceeEec-----ccchhhhcchhhcCcEEEeCCCccCHHHHhcCee-EE-----------cCCCHHH
Confidence 77777777678999999983 45788899999999999984 4666666665544 33 3569999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 543 VSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 543 la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+.++++.++.+ ...+..+.. ...-|.--+.+++..+.+.+-+.
T Consensus 321 I~~~i~~~l~~--~~~~~~~~~--~~npYGdG~as~rI~~~L~~~~~ 363 (373)
T d1v4va_ 321 VYRVVKGLLEN--PEELSRMRK--AKNPYGDGKAGLMVARGVAWRLG 363 (373)
T ss_dssp HHHHHHHHHTC--HHHHHHHHH--SCCSSCCSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcC--HHHHhhccc--CCCCCCCCHHHHHHHHHHHHHhC
Confidence 99999999987 444444322 12345444566777777766553
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.11 E-value=0.00064 Score=68.82 Aligned_cols=232 Identities=16% Similarity=0.064 Sum_probs=133.5
Q ss_pred HHHHHH-HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeC-CCccCcc-CCCCccccccccCcchhhcchHH
Q 007224 310 WMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEW-NPLTDKYIGVKYDASTVMDAKPL 386 (612)
Q Consensus 310 ~~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N-gvd~~~~-~p~~~~~~~~~~~~~~~~~~~~~ 386 (612)
..|.++ +.||.-++.++..++.+.+ .|.+.. +|.++-| ++|.-.. .+.. ......
T Consensus 133 ~~R~~iskls~~hf~~~~~~~~~L~~---~G~~~~------~I~~vG~~~~D~l~~~~~~~-------------~~~~~~ 190 (376)
T d1f6da_ 133 ANRTLTGHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQV-------------MSSDKL 190 (376)
T ss_dssp HHHHHHHHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHT-------------TTCHHH
T ss_pred hhhhhhccceeEEEeccHHHHhHHHh---cCCCcc------ccceecCchHHHHHHHHhhh-------------hccchh
Confidence 344455 4789999999999999987 787765 6777665 2332100 0000 000011
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEcCcc-cccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEE
Q 007224 387 LKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 463 (612)
Q Consensus 387 ~k~~l~~~~gl~~~~~~~~il~iGrl~-~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~ 463 (612)
.+..+.....+.. ....+++..=|.+ ..+....++.++..+.. .++.+++--...........+.... ..++..+
T Consensus 191 ~~~~~~~~~~~~~-~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~-~~ni~~~ 268 (376)
T d1f6da_ 191 RSELAANYPFIDP-DKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGH-VKNVILI 268 (376)
T ss_dssp HHHHHTTCTTCCT-TSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTT-CTTEEEE
T ss_pred hhhhhccccccCC-CCceEEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhhcc-cccceee
Confidence 1112222222221 2223444444544 34556777777776654 4666666554443334444443333 3357776
Q ss_pred eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCceEEEecccccccCCCCCCCHHH
Q 007224 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 464 ~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 542 (612)
..+.....-.+++.|++++- ..|-.+.||-.+|+|+|.-..+ .-.+.+..+ +-+++ +.|.++
T Consensus 269 ~~l~~~~fl~ll~~a~~vig-----nSssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v-----------~~~~~~ 331 (376)
T d1f6da_ 269 DPQEYLPFVWLMNHAWLILT-----DSGGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLV-----------GTDKQR 331 (376)
T ss_dssp CCCCHHHHHHHHHHCSEEEE-----SSSGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEEC-----------CSSHHH
T ss_pred ccccHHHHHHHHhhceEEEe-----cCcchHhhHHHhCCCEEEcCCCccCccceecC-eeEEC-----------CCCHHH
Confidence 66677666679999999994 4567788999999999976432 234455444 34443 458999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 007224 543 VSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 543 la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~ 586 (612)
+.+++.+++.+ ......+.. ....|---+.+++..+++++
T Consensus 332 I~~ai~~~l~~--~~~~~~~~~--~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 332 IVEEVTRLLKD--ENEYQAMSR--AHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp HHHHHHHHHHC--HHHHHHHHH--SCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhC--hHhhhhhcc--CCCCCCCChHHHHHHHHHHh
Confidence 99999999987 332222211 12335444667777777764
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.05 E-value=0.00059 Score=69.16 Aligned_cols=224 Identities=15% Similarity=0.101 Sum_probs=118.2
Q ss_pred HHHHHH-HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCC-CccCccCCCCccccccccCcchhhcchHHH
Q 007224 310 WMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 310 ~~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
..|.++ +.||..++.++..++.+.+ .|.+.. +|.++-|. +|.-........ .
T Consensus 135 ~~R~~iskls~~hf~~t~~~~~~L~~---~G~~~~------~I~~vG~~~~D~i~~~~~~~~-~---------------- 188 (377)
T d1o6ca_ 135 LNRQMTGAIADLHFAPTGQAKDNLLK---ENKKAD------SIFVTGNTAIDALNTTVRDGY-S---------------- 188 (377)
T ss_dssp HHHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC-C----------------
T ss_pred hhccccccceeEEeecchhhhhhhhh---hccccc------eEeeccchhHHHHHHHHHHHH-h----------------
Confidence 345445 4799999999999999997 787765 67776653 332110000000 0
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccc-cCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEe
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 464 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~-Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~ 464 (612)
...... ...+..+++.+-|.+.. +.....+.++..+.. .++.+++...........+.+... ...++....
T Consensus 189 ----~~~~~~-~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~ni~~~~ 262 (377)
T d1o6ca_ 189 ----HPVLDQ-VGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFG-DSDRVHLIE 262 (377)
T ss_dssp ----CSTTTT-TTTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC---CCSSEEECC
T ss_pred ----hhhhhh-ccCCceEEEEeccccccccchHHHHHHHHhhcccccccccccccccccccchhhhhccc-cccceEecc
Confidence 000000 11233456566665543 222333333333322 456665554433323333332222 234577776
Q ss_pred ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCCCCCHHHH
Q 007224 465 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 465 ~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~l 543 (612)
.+.......+++.|++++- ..|-.+.||-.+|+|+|.-.. +.-.+.+..| +-+++ ..|.+++
T Consensus 263 ~l~~~~fl~llk~s~~vIg-----nSss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv-----------~~~~~~I 325 (377)
T d1o6ca_ 263 PLEVIDFHNFAAKSHFILT-----DSGGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLA-----------GTDEENI 325 (377)
T ss_dssp CCCHHHHHHHHHHCSEEEE-----C--CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEE-----------CSCHHHH
T ss_pred ccchHHHHHHHhhhheeec-----ccchhHHhhhhhhceEEEeCCCCcCcchhhcC-eeEEC-----------CCCHHHH
Confidence 7777777779999999983 355668899999999998854 3344555444 33443 3488999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 007224 544 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 544 a~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~ 586 (612)
.+++..++.+ ......+.. ....|---+.+++..+++.+
T Consensus 326 ~~~i~~~l~~--~~~~~~~~~--~~npYGdG~as~rI~~~L~~ 364 (377)
T d1o6ca_ 326 YQLAKQLLTD--PDEYKKMSQ--ASNPYGDGEASRRIVEELLF 364 (377)
T ss_dssp HHHHHHHHHC--HHHHHHHHH--CCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHhC--hHHHhhhcc--CCCCCCCChHHHHHHHHHHH
Confidence 9999999987 444333322 12334444566676666654
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.52 E-value=0.0037 Score=63.43 Aligned_cols=140 Identities=9% Similarity=-0.021 Sum_probs=74.0
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeC
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 484 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~p 484 (612)
++..+........+.+...+..+.....++++.-.+. ......+.+... .+.++......+.+.. ..+..+|++|.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~n~~v~~~~pq~~~-l~~p~~~~fIt- 354 (461)
T d2acva1 278 FLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWME-LEGKGMICGWAPQVEV-LAHKAIGGFVS- 354 (461)
T ss_dssp EEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHH-HHCSEEEESSCCHHHH-HHSTTEEEEEE-
T ss_pred eeeccccccCCCHHHHHHHHHHHHhcCccEEEEeecccccCCccchhhhc-cCCCeEEEecCCHHHH-HhcccCCEEEe-
Confidence 3333344444454554444444433356666554432 111111111111 1222444444444433 25688899993
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCCC----cccc-eecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 485 SRFEPCGLIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 485 S~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~-v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-|-..++.||+.+|+|.|+.-..+ ...- ++..+.|+.+..... ..-..-++++++++|.+++++
T Consensus 355 ---HGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~--~~~~~~t~~~l~~a~~~vl~~ 423 (461)
T d2acva1 355 ---HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR--KGSDVVAAEEIEKGLKDLMDK 423 (461)
T ss_dssp ---CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC--TTCCCCCHHHHHHHHHHHTCT
T ss_pred ---cCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeecccc--ccCCccCHHHHHHHHHHHhhC
Confidence 344568999999999999976433 3333 345567876510000 000114789999999999964
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.44 E-value=0.0061 Score=61.88 Aligned_cols=130 Identities=12% Similarity=-0.039 Sum_probs=74.9
Q ss_pred EEEEEcCcccc--cCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--HhcCE
Q 007224 405 VIGFIGRLEEQ--KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADF 480 (612)
Q Consensus 405 ~il~iGrl~~~--Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l--~~adi 480 (612)
+.+..|.+... .-...+++++.++ +.++++...+.... ..-+......+.++......+... ++ ..+++
T Consensus 268 v~~s~gs~~~~~~~~~~~~~~~~~~~---~~~vl~~~~~~~~~-~l~~~~~~~~~~nv~~~~~~pq~~---lL~hp~~~~ 340 (450)
T d2c1xa1 268 VYISFGTVTTPPPAEVVALSEALEAS---RVPFIWSLRDKARV-HLPEGFLEKTRGYGMVVPWAPQAE---VLAHEAVGA 340 (450)
T ss_dssp EEEECCSSCCCCHHHHHHHHHHHHHH---TCCEEEECCGGGGG-GSCTTHHHHHTTTEEEESCCCHHH---HHTSTTEEE
T ss_pred eeecccccccCCHHHHHHHHHHHHhc---CCeEEEEECCCccc-cCChhhhhhccccccccccCChHh---hhccCceeE
Confidence 44445554322 1234455555544 55666655433110 001112222344566555555544 45 66777
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceec-CceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|. =|-..++.||+.+|+|.|+....+ ...-+.+ .+.|+.+. ...-+.+++.++|.+++++
T Consensus 341 fIt----HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~--------~~~~t~~~l~~ai~~vL~d 406 (450)
T d2c1xa1 341 FVT----HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE--------GGVFTKSGLMSCFDQILSQ 406 (450)
T ss_dssp EEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG--------GGSCCHHHHHHHHHHHHHS
T ss_pred EEc----cCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEec--------CCCcCHHHHHHHHHHHhcC
Confidence 773 344568999999999999997654 2233433 47788651 1234789999999999998
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.38 E-value=0.011 Score=60.02 Aligned_cols=82 Identities=9% Similarity=-0.027 Sum_probs=56.6
Q ss_pred HCCCceEEEeccChHHHHHHH--HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccce-ecCceEEEecc
Q 007224 455 LYPEKARGVAKFNIPLAHMII--AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGS 527 (612)
Q Consensus 455 ~~~~~i~~~~~~~~~~~~~~l--~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~l~~~ 527 (612)
..+.++.....++... ++ ..+++||. =|-..++.||+.+|+|.|+....+ ...-+ +..+.|..+
T Consensus 343 ~~~~Nv~~~~~~Pq~~---lL~hp~~~~fIt----HGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l-- 413 (473)
T d2pq6a1 343 EIADRGLIASWCPQDK---VLNHPSIGGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI-- 413 (473)
T ss_dssp HHTTTEEEESCCCHHH---HHTSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC--
T ss_pred hccCceEEeeeCCHHH---HhcCCcCcEEEe----cCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEee--
Confidence 3445576555545443 56 57777873 244568999999999999997543 33334 343678865
Q ss_pred cccccCCCC-CCCHHHHHHHHHHHHHh
Q 007224 528 FSVDCEAVD-PVDVAAVSTTVRRALAT 553 (612)
Q Consensus 528 ~~~~~~~v~-~~d~~~la~~l~~ll~~ 553 (612)
+ .-+.++++++|.+++++
T Consensus 414 --------~~~~t~~~l~~ai~~vl~d 432 (473)
T d2pq6a1 414 --------DTNVKREELAKLINEVIAG 432 (473)
T ss_dssp --------CSSCCHHHHHHHHHHHHTS
T ss_pred --------CCCcCHHHHHHHHHHHHcC
Confidence 3 23789999999999998
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=92.78 E-value=0.44 Score=45.80 Aligned_cols=113 Identities=18% Similarity=0.212 Sum_probs=71.4
Q ss_pred HHHHHHHHhCCCCCCCCcEEEE-Ec-CcccccC--HHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHC----CC
Q 007224 387 LKEALQAEVGLPVDRNIPVIGF-IG-RLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY----PE 458 (612)
Q Consensus 387 ~k~~l~~~~gl~~~~~~~~il~-iG-rl~~~Kg--~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~----~~ 458 (612)
.+.......++.. +++.|++ .| +..+.|. .+.+++.+.++.+.+.+++++|...+ .+..+.+.... ..
T Consensus 166 ~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~e--~~~~~~~~~~~~~~~~~ 241 (348)
T d1pswa_ 166 EKSYTCNQFSLSS--ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKD--HEAGNEILAALNTEQQA 241 (348)
T ss_dssp HHHHHHHHTTCCS--SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGG--HHHHHHHHTTSCHHHHT
T ss_pred HHHHHHHHhcccc--CCCeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccch--HHHHHHHHHhhhccccc
Confidence 3555666777654 3355444 43 4444564 55688888888777889999986552 33333433322 12
Q ss_pred ceEEE-eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 459 KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 459 ~i~~~-~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.+... +..+-.++..+++.||++|.+.. ..+--|.++|+|+|+--
T Consensus 242 ~~~~l~g~~sl~el~~li~~a~l~I~~Dt-----g~~HlAaa~g~p~i~lf 287 (348)
T d1pswa_ 242 WCRNLAGETQLDQAVILIAACKAIVTNDS-----GLMHVAAALNRPLVALY 287 (348)
T ss_dssp TEEECTTTSCHHHHHHHHHTSSEEEEESS-----HHHHHHHHTTCCEEEEE
T ss_pred ccccccCCccHHHHHHHHhcceeEeecCc-----cHHHHHHHcCCCEEEEE
Confidence 23333 23455666779999999997653 34566999999999985
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=87.83 E-value=0.59 Score=46.31 Aligned_cols=84 Identities=11% Similarity=-0.131 Sum_probs=51.8
Q ss_pred CceEEEeccChHHHHHHHH--hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceec-CceEEEeccccc
Q 007224 458 EKARGVAKFNIPLAHMIIA--GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSV 530 (612)
Q Consensus 458 ~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~ 530 (612)
.++....+.+... +++ .++++|. =|-..++.||+.+|+|.|+...-+ ....+.+ -+-|+.....
T Consensus 334 ~nv~~~~w~Pq~~---lL~hp~~~~fVt----HGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~-- 404 (471)
T d2vcha1 334 RGFVIPFWAPQAQ---VLAHPSTGGFLT----HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG-- 404 (471)
T ss_dssp TEEEEESCCCHHH---HHHSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC--
T ss_pred CCeeecccCCHHH---HhcCccCCEEEe----cCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecC--
Confidence 4455444444443 674 6777773 244568999999999999986433 2233323 2456643100
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHh
Q 007224 531 DCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 531 ~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-...-+.+++.++|.+++++
T Consensus 405 ---~~~~~t~~~l~~ai~~vl~~ 424 (471)
T d2vcha1 405 ---DDGLVRREEVARVVKGLMEG 424 (471)
T ss_dssp ---TTSCCCHHHHHHHHHHHHTS
T ss_pred ---CCCcCCHHHHHHHHHHHhCC
Confidence 00114789999999999987
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=82.37 E-value=0.45 Score=41.15 Aligned_cols=33 Identities=36% Similarity=0.641 Sum_probs=25.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||.+|+. .|+.| ..||..|+++||+|+++...
T Consensus 1 Mki~vigG-------aG~iG---~alA~~la~~G~~V~l~~R~ 33 (212)
T d1jaya_ 1 MRVALLGG-------TGNLG---KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEeC-------CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 89988742 25555 67999999999999999643
|