Citrus Sinensis ID: 007227
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 612 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LMX4 | 613 | Probable inactive purple | yes | no | 1.0 | 0.998 | 0.748 | 0.0 | |
| Q5MAU8 | 611 | Probable inactive purple | no | no | 0.982 | 0.983 | 0.675 | 0.0 | |
| Q8H1R2 | 615 | Probable inactive purple | no | no | 0.955 | 0.951 | 0.657 | 0.0 | |
| Q687E1 | 368 | Nucleotide pyrophosphatas | N/A | no | 0.570 | 0.948 | 0.670 | 1e-146 | |
| Q9LMG7 | 656 | Probable inactive purple | no | no | 0.826 | 0.771 | 0.299 | 5e-55 | |
| Q9ZQ81 | 651 | Probable inactive purple | no | no | 0.818 | 0.769 | 0.309 | 4e-54 | |
| Q8BX37 | 438 | Iron/zinc purple acid pho | no | no | 0.586 | 0.819 | 0.278 | 1e-25 | |
| Q6ZNF0 | 438 | Iron/zinc purple acid pho | yes | no | 0.516 | 0.721 | 0.271 | 4e-25 | |
| A5D6U8 | 443 | Iron/zinc purple acid pho | yes | no | 0.594 | 0.821 | 0.271 | 4e-21 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.614 | 0.860 | 0.259 | 3e-20 |
| >sp|Q9LMX4|PPA1_ARATH Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 984 bits (2544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/613 (74%), Positives = 525/613 (85%), Gaps = 1/613 (0%)
Query: 1 MRE-LRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQ 59
MRE L +I + ++ VLGA SHEDQPLS IA+HK F L++ AY+KASP++LG GQ
Sbjct: 1 MRESLVAILVTVISVLGAIHQVKSHEDQPLSGIAVHKITFGLNEKAYVKASPTVLGSNGQ 60
Query: 60 NSDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSP 119
+S+ + V+Y+SP PS DWIGVFSP++F++STCP +N V PP LCSAP+KFQYAN+S+P
Sbjct: 61 HSELVLVQYSSPKPSDDDWIGVFSPADFNASTCPGDNKMVQPPRLCSAPVKFQYANFSNP 120
Query: 120 QYKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKV 179
+Y +TG GSLKLQLINQRSDFSF LF+ GLLNPK+VA+SNKV F NPNAPVYPRLA GK
Sbjct: 121 RYTNTGTGSLKLQLINQRSDFSFALFSGGLLNPKLVAISNKVAFENPNAPVYPRLALGKE 180
Query: 180 WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239
W+EMTVTWTSGYG+N AEP VEWG KGG+R SPAGTLTF R SMCGAPARTVGWRDPGY
Sbjct: 181 WDEMTVTWTSGYGLNLAEPVVEWGVKGGERKLSPAGTLTFARNSMCGAPARTVGWRDPGY 240
Query: 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDE 299
IHT FL+ELWPN+ YTY++GHRL NG IWS EYQFK+SP+PGQ+S+QQV+IFGDMGK E
Sbjct: 241 IHTAFLKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPGQNSVQQVVIFGDMGKAE 300
Query: 300 ADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359
DGS+EYN+FQR SLNTT+QLI+DLK D VFHIGDICYANGY+SQWDQF AQIEPIAST
Sbjct: 301 VDGSSEYNDFQRASLNTTKQLIKDLKKTDAVFHIGDICYANGYLSQWDQFIAQIEPIAST 360
Query: 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFC 419
VPYMIASGNHER WP +GSFY +DSGGECGV E MFYVP +NRAK WYS+DYGMFRFC
Sbjct: 361 VPYMIASGNHERVWPNSGSFYEGLDSGGECGVPAETMFYVPAQNRAKVWYSSDYGMFRFC 420
Query: 420 IADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMG 479
+ADTE DWREGTEQY FIEHCLASVDRQKQPWLIFLAHRVLGYSS YA EGSFAEPMG
Sbjct: 421 VADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSSTYFYAEEGSFAEPMG 480
Query: 480 RESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGA 539
RESLQKLWQKYKVDIA++GH HNYER CP+YQ++CT+ EK YK LNGTIHI AGG GA
Sbjct: 481 RESLQKLWQKYKVDIAIYGHAHNYERTCPVYQSVCTSHEKSNYKAPLNGTIHIVAGGGGA 540
Query: 540 SLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILA 599
L+ F+ LQ WSL+RDYD+GF+KLTA DHSNLLFEYKKS DG+V+DSF IS+DYRDILA
Sbjct: 541 GLAEFSDLQPNWSLFRDYDYGFLKLTAIDHSNLLFEYKKSSDGRVHDSFTISKDYRDILA 600
Query: 600 CSVDSCPSMTLAS 612
C+VDSCP+ TLAS
Sbjct: 601 CAVDSCPATTLAS 613
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q5MAU8|PPA27_ARATH Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/608 (67%), Positives = 480/608 (78%), Gaps = 7/608 (1%)
Query: 11 ILLVLGAF--RLTISHE----DQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNSDWL 64
LLVL F +++ SHE DQ LS+I I+ A +A+I SP +LG +GQ+++W+
Sbjct: 5 FLLVLLWFIVQVSSSHENGRGDQALSQIDIYAINLAQHHSAFIHVSPLVLGSQGQDTEWV 64
Query: 65 TVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKST 124
V ++P PS DW+GVFSP+ F SS+C + + P +CSAP+K+ YA SSP Y T
Sbjct: 65 NVVISNPEPSSDDWVGVFSPAKFDSSSCAPTDDKEIAPFICSAPVKYMYAK-SSPDYMKT 123
Query: 125 GKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMT 184
G LK LINQR+DFSF LFT GL NP +V+VSN V+F NP APVYPRLA GK W+EMT
Sbjct: 124 GNAVLKFMLINQRADFSFALFTGGLSNPTLVSVSNHVSFINPKAPVYPRLALGKKWDEMT 183
Query: 185 VTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244
VTWTSGY I EA PFVEW KG SPAGTLTF R SMCGAPARTVGWRDPG+IHT
Sbjct: 184 VTWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTLTFTRNSMCGAPARTVGWRDPGFIHTAS 243
Query: 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSN 304
L++LWPN YTY++GH L NG+ +WS + FK+SPYPGQDSLQ+VIIFGDMGK E DGSN
Sbjct: 244 LKDLWPNLKYTYRMGHELMNGSIVWSKNFTFKSSPYPGQDSLQRVIIFGDMGKGERDGSN 303
Query: 305 EYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364
EYN++Q GSLNTT QLI+DLKNIDIVFHIGDI YANGYISQWDQFTAQ+EPIASTVPYM+
Sbjct: 304 EYNDYQPGSLNTTDQLIKDLKNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMV 363
Query: 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTE 424
ASGNHERDWP +GSFYG DSGGECGV E MF P EN+AKFWYS DYGMFRFC+ADTE
Sbjct: 364 ASGNHERDWPDSGSFYGGKDSGGECGVPAETMFDFPAENKAKFWYSADYGMFRFCVADTE 423
Query: 425 QDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQ 484
DWREG+EQY+FIE CLASVDR+ QPWLIF+AHRVLGYS++ Y EGSF EPMGRESLQ
Sbjct: 424 HDWREGSEQYQFIERCLASVDRRAQPWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQ 483
Query: 485 KLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPF 544
KLWQKYKVDIA +GHVHNYER CPIYQN C + EK +Y G+ GTIH+ GGAG+ LS F
Sbjct: 484 KLWQKYKVDIAFYGHVHNYERTCPIYQNQCMDNEKSHYSGAFKGTIHVVVGGAGSHLSSF 543
Query: 545 TTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILACSVDS 604
++L+ WS++RDYD+GFVKLTAFDHS+LLFEYKKS +G V+DSF I R+YRD+LAC DS
Sbjct: 544 SSLKPKWSIFRDYDYGFVKLTAFDHSSLLFEYKKSSNGAVHDSFTIFREYRDVLACVRDS 603
Query: 605 CPSMTLAS 612
C TLAS
Sbjct: 604 CEPTTLAS 611
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8H1R2|PPA24_ARATH Probable inactive purple acid phosphatase 24 OS=Arabidopsis thaliana GN=PAP24 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/587 (65%), Positives = 461/587 (78%), Gaps = 2/587 (0%)
Query: 26 DQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNSDWLTVEYNSPNPSVGDWIGVFSPS 85
DQ L++I +++ ALD + + ASP +LG +G++++W+ + ++P P+ DWIGVFSP+
Sbjct: 29 DQALAQINVYETSLALDSSVKLHASPQVLGSQGEDTEWVNLAISNPKPTSDDWIGVFSPA 88
Query: 86 NFSSSTC-PAENPRVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKLQLINQRSDFSFVL 144
F S C P + P +CS+PIK+ Y N S P Y +G +LK Q+INQR+D SF L
Sbjct: 89 KFDSGNCWPTSGGKEKTPYICSSPIKYMYCN-SHPDYMKSGNVTLKFQIINQRADVSFAL 147
Query: 145 FTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGP 204
F+NG+ P ++ VSN V F NP APVYPRLA GK W+EMTVTWTSGY I+EA PF+EW
Sbjct: 148 FSNGVQEPHLLGVSNPVAFFNPKAPVYPRLALGKNWDEMTVTWTSGYNIDEAVPFIEWSA 207
Query: 205 KGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFN 264
KG SPAGTLTF R SMCG PAR VGWRDPG+ HT FL+ELWPN Y Y+LGH L N
Sbjct: 208 KGLPARRSPAGTLTFNRNSMCGNPARGVGWRDPGFFHTSFLKELWPNREYIYRLGHDLVN 267
Query: 265 GTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL 324
G+ IWS Y F +SPYPGQDS Q+VIIFGDMGK E DGSNEYN++Q GSLNTT Q+I+DL
Sbjct: 268 GSTIWSKNYTFVSSPYPGQDSKQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQVIKDL 327
Query: 325 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMD 384
K+IDIVFHIGD+ Y+NGY+SQWDQFTAQ++PIASTVPYMIASGNHERDWP TGSFY D
Sbjct: 328 KDIDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTVPYMIASGNHERDWPDTGSFYAGTD 387
Query: 385 SGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASV 444
SGGECGV E MFY P ENRAKFWY TDYGMFRFC+AD+E DWREGTEQY+FIE+CLA+V
Sbjct: 388 SGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCVADSEHDWREGTEQYKFIENCLATV 447
Query: 445 DRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504
DR+ QPWLIF+AHRVLGYS++ Y EG+F EPMGRESLQKLWQKYKVD+A +GHVHNYE
Sbjct: 448 DRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESLQKLWQKYKVDLAFYGHVHNYE 507
Query: 505 RICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKL 564
R CPIY++ C N +K +Y G+ GTIH+ GGAG+ LSPF++L WSL RDYD GFVKL
Sbjct: 508 RTCPIYESQCVNNDKDHYSGTFKGTIHVVVGGAGSHLSPFSSLVPKWSLVRDYDFGFVKL 567
Query: 565 TAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILACSVDSCPSMTLA 611
TA DHS+LLFEYKKS G+VYDSF ISRDYRD+LAC+ DSC T A
Sbjct: 568 TASDHSSLLFEYKKSSTGQVYDSFNISRDYRDVLACTHDSCEPTTSA 614
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q687E1|NPP_HORVU Nucleotide pyrophosphatase/phosphodiesterase (Fragments) OS=Hordeum vulgare GN=npp PE=1 SV=2 | Back alignment and function description |
|---|
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 234/349 (67%), Positives = 282/349 (80%)
Query: 264 NGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD 323
+G+ +W+ Y F+A P PGQ+SLQ++I+FGDMGK E DGSNE+ N+Q GSLNTT +LI+D
Sbjct: 20 DGSVVWAKPYTFRAPPTPGQNSLQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIED 79
Query: 324 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNM 383
L N DIVFHIGD+ YANGY+SQWDQFTAQ+ PI++ PYM+ASGNHERDWP TG F+
Sbjct: 80 LDNYDIVFHIGDMPYANGYLSQWDQFTAQVAPISAKKPYMVASGNHERDWPNTGGFFDVK 139
Query: 384 DSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443
DSGGECGV E M+Y P ENRA FWY DYGMFRFC+ D+E DWREGT QY+FIE CL++
Sbjct: 140 DSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLST 199
Query: 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503
VDR+ QPWLIF AHRVLGYSS+ YA +GSF EP GRESLQKLWQ+Y+VDIA FGHVHNY
Sbjct: 200 VDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNY 259
Query: 504 ERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVK 563
ER CP+YQ+ C N +K +Y G++NGTI + AGG G+ LS +TT WS++RD+D+GF K
Sbjct: 260 ERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTK 319
Query: 564 LTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILACSVDSCPSMTLAS 612
LTAF+HS+LLFEY KS DGKVYDSF I RDYRD+L+C DSC TLAS
Sbjct: 320 LTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 368
|
Hydrolyzes pyrophosphate, phosphodiester and phosphosulfate linkages of nucleotide-sugars, sulfonucleotides and nucleoside di and triphosphates. Highest activity observed with the substrates ADP-glucose and adenosine 5'-phosphosulfate. Hordeum vulgare (taxid: 4513) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9LMG7|PPA2_ARATH Probable inactive purple acid phosphatase 2 OS=Arabidopsis thaliana GN=PAP2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 287/608 (47%), Gaps = 102/608 (16%)
Query: 38 VFALDDNAYIKASPSILGMKGQNSDWLTVEYNSPN-PSVGDWIGVFSPSNFSSSTCPAEN 96
V + D A I SP+ L G D + ++++ + PS DW+G++SP E+
Sbjct: 17 VSSADSKATISISPNALNRSG---DSVVIQWSGVDSPSDLDWLGLYSP---------PES 64
Query: 97 PRVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKLQLINQRSDFSFVLF--TNGLLNPK- 153
P + I +++ N SS G GS+ L L N RS+++F +F + ++PK
Sbjct: 65 PNDHF-------IGYKFLNESSTW--KDGFGSISLPLTNLRSNYTFRIFRWSESEIDPKH 115
Query: 154 -------------VVAVSNKVTF-TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPF 199
++A S ++TF + P L+ + N M V + +G G E F
Sbjct: 116 KDHDQNPLPGTKHLLAESEQLTFGSGVGMPEQIHLSFTNMVNTMRVMFVAGDG---EERF 172
Query: 200 VEWGPKGGDRTYSPAGT-LTFGRGSMCGAPAR-TVGWRDPGYIHTGFLRELWPNAMYTYK 257
V +G S A + + R MC +PA T+GWRDPG+I ++ L Y Y+
Sbjct: 173 VRYGESKDLLGNSAAARGMRYEREHMCDSPANSTIGWRDPGWIFDTVMKNLNDGVRYYYQ 232
Query: 258 LGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNF---QRGSL 314
+G + + WS + + A ++++ +FGDMG + Y F Q S+
Sbjct: 233 VG----SDSKGWSEIHSYIARDVTAEETV--AFMFGDMG-----CATPYTTFIRTQDESI 281
Query: 315 NTTRQLIQDLKNID----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHE 370
+T + +++D++ + ++ HIGDI YA GY WD+F AQ+EPIASTVPY + GNHE
Sbjct: 282 STVKWILRDIEALGDKPAMISHIGDISYARGYSWVWDEFFAQVEPIASTVPYHVCIGNHE 341
Query: 371 RDWPG-------TGSFYGNMDSGGECGVLVENMFYVPTENRA----------KFWYSTDY 413
D+ S YGN D GGECGV F +P + +YS D
Sbjct: 342 YDFSTQPWKPDWAASIYGN-DGGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYYSYDM 400
Query: 414 GMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGS 473
G F TE ++ +G QY FI+ L SVDR+K P+++ HR + +S+ V +
Sbjct: 401 GTVHFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPMYTTSN---EVRDT 457
Query: 474 FAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIA 533
E L+ L+ K V +A++GHVH YER CPI N C + ++G+ +H+
Sbjct: 458 MIRQKMVEHLEPLFVKNNVTLALWGHVHRYERFCPISNNTCGTQ----WQGN---PVHLV 510
Query: 534 AGGAGASLSPF-----------TTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDG 582
G AG P Q S+YR + G+ +L A + L + + DG
Sbjct: 511 IGMAGQDWQPIWQPRPNHPDLPIFPQPEQSMYRTGEFGYTRLVA-NKEKLTVSFVGNHDG 569
Query: 583 KVYDSFRI 590
+V+D+ +
Sbjct: 570 EVHDTVEM 577
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9ZQ81|PPA9_ARATH Probable inactive purple acid phosphatase 9 OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 186/601 (30%), Positives = 276/601 (45%), Gaps = 100/601 (16%)
Query: 45 AYIKASPSILGMKGQNSDWLTVEYNS-PNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPL 103
A I SP L G D + ++++ +PS DW+G++SP P
Sbjct: 22 ATISISPQTLNRSG---DIVVIKWSGVESPSDLDWLGIYSP----------------PDS 62
Query: 104 LCSAPIKFQYANYSSPQYKSTGKGSLKLQLINQRSDFSFVLF--TNGLLNPK-------- 153
I +++ + SP ++S G GS+ L L N RS+++F +F T +NPK
Sbjct: 63 PHDHFIGYKFLS-DSPTWQS-GSGSISLPLTNLRSNYTFRIFHWTQSEINPKHQDHDHNP 120
Query: 154 ------VVAVSNKVTFT-NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKG 206
++ SN++ F N P L+ NEM V + +G G + E K
Sbjct: 121 LPGTRHLLTESNQLNFRFAVNRPEQIHLSYTDNINEMRVVFVTGDGEEREARYGEVKDKL 180
Query: 207 GDRTYSPAGTLTFGRGSMCGAPAR-TVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNG 265
+ + A + + MC APA TVGWRDPG+ ++ L Y Y++G L
Sbjct: 181 DN--IAVARGVRYEIEHMCHAPANSTVGWRDPGWTFDAVMKNLKQGIRYYYQVGSDLKG- 237
Query: 266 TYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRG---SLNTTRQLIQ 322
WS + F + +++L +FGDMG Y F RG SL+T + +++
Sbjct: 238 ---WSEIHSFVSRNEGSEETL--AFMFGDMG-----CYTPYTTFIRGEEESLSTVKWILR 287
Query: 323 DLKNID-----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGT- 376
D++ + IV HIGDI YA GY WD+F QIEPIAS VPY + GNHE DWP
Sbjct: 288 DIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEPIASKVPYHVCIGNHEYDWPNQP 347
Query: 377 -----GSFYGNMDSGGECGVLVENMFYVP---TE--------NRAKFWYSTDYGMFRFCI 420
++ DSGGECGV F +P TE +YS D G F
Sbjct: 348 WKPDWAAYVYGKDSGGECGVPYSVKFNMPGNSTEATGMVKGPQSRNLYYSYDMGSVHFVY 407
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
TE D+ +G +QY F++ L SV+R K P+++ HR + +S + + E M
Sbjct: 408 ISTETDFLKGGKQYSFLKSDLESVNRSKTPFVVVQGHRPMYTTS--RKIRDAAIREKM-I 464
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGAS 540
E L+ L K V +A++GHVH YER C I N C + ++G+ +H+ G AG
Sbjct: 465 EHLEPLLVKNNVTVALWGHVHRYERFCAISNNTCGER----WQGN---PVHLVIGMAGKD 517
Query: 541 LSPF-----------TTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFR 589
P Q S+YR + G+++L A + L Y + DG+V+D
Sbjct: 518 SQPMWEPRANHEDVPIFPQPANSMYRGGEFGYIRLVA-NKERLTLSYVGNHDGEVHDVVE 576
Query: 590 I 590
I
Sbjct: 577 I 577
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8BX37|PAPL_MOUSE Iron/zinc purple acid phosphatase-like protein OS=Mus musculus GN=Papl PE=2 SV=2 | Back alignment and function description |
|---|
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 185/435 (42%), Gaps = 76/435 (17%)
Query: 183 MTVTWTSGYGINEAEPFVEWGPKGGDRTYSP--AGTLTFGRGSMCGAPARTVGWRDPGYI 240
MTVTWT+ W P + + +G L F A R YI
Sbjct: 46 MTVTWTT------------WAPARSEVQFGSQLSGPLPFRAHGTARAFVDGGVLRRKLYI 93
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
H LR+L P A Y Y+ G + WS ++F A G ++ +FGDMG D
Sbjct: 94 HRVTLRKLQPGAQYVYRCG-----SSQGWSRRFRFTALKN-GVHWSPRLAVFGDMGADNP 147
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPI 356
+L R+ Q D V H+GD Y N + D+F IEP+
Sbjct: 148 K-----------ALPRLRRDTQQ-GMFDAVLHVGDFAYNMDQDNARVG--DRFMRLIEPV 193
Query: 357 ASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMF 416
A+++PYM GNHE+ + + N + F +P +N WYS D G
Sbjct: 194 AASLPYMTCPGNHEQRYN-----FSNYKA----------RFSMPGDNEG-LWYSWDLGPA 237
Query: 417 RFCIADTEQDW-----REGTE-QYRFIEHCL--ASVDRQKQPWLIFLAHRVLGYS-SDL- 466
TE + R E Q+R++E+ L A+ +R +PW+I + HR + S +DL
Sbjct: 238 HIISFSTEVYFFLHYGRHLIEKQFRWLENDLQKANKNRVARPWIITMGHRPMYCSNADLD 297
Query: 467 ------SYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKH 520
S +G + G L+ L+ KY VD+ + H H+YER+ PIY N
Sbjct: 298 DCTRHESRVRKGLHGKLFG---LEDLFHKYGVDLEFWAHEHSYERLWPIYNYQVFNGSLE 354
Query: 521 YYKGSLNGTIHIAAGGAGAS--LSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNL-LFEYK 577
+ G +HI G AG L+PF WS R ++G+ ++ + +++ + +
Sbjct: 355 SPYTNPRGPVHIITGSAGCEELLTPFVRKPRPWSAVRVKEYGYTRMHILNGTHMHIQQVS 414
Query: 578 KSRDGKVYDSFRISR 592
+DGK+ D + R
Sbjct: 415 DDQDGKIVDDVWVVR 429
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q6ZNF0|PAPL_HUMAN Iron/zinc purple acid phosphatase-like protein OS=Homo sapiens GN=PAPL PE=2 SV=2 | Back alignment and function description |
|---|
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 162/376 (43%), Gaps = 60/376 (15%)
Query: 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKD 298
YIH LR+L P Y Y+ G WS ++F+A G ++ +FGD+G D
Sbjct: 92 YIHRVTLRKLLPGVQYVYRCG-----SAQGWSRRFRFRALKN-GAHWSPRLAVFGDLGAD 145
Query: 299 EADGSNEYNNFQRGSLNTTRQLIQDLKN--IDIVFHIGDICYA----NGYISQWDQFTAQ 352
+L +D + D V H+GD Y N + D+F
Sbjct: 146 NP--------------KAVPRLRRDTQQGMYDAVLHVGDFAYNLDQDNARVG--DRFMRL 189
Query: 353 IEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTD 412
IEP+A+++PYM GNHE + N + + F +P +N WYS D
Sbjct: 190 IEPVAASLPYMTCPGNHEERY--------NFSN-------YKARFSMPGDNEG-LWYSWD 233
Query: 413 YGMFRFCIADTEQDW------REGTEQYRFIEHCL--ASVDRQKQPWLIFLAHRVLGYS- 463
G TE + Q+R++E L A+ +R +PW+I + HR + S
Sbjct: 234 LGPAHIISFSTEVYFFLHYGRHLVQRQFRWLESDLQKANKNRAARPWIITMGHRPMYCSN 293
Query: 464 SDLSYAVEGSFAEPMGRES----LQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEK 519
+DL G + L+ L+ KY VD+ ++ H H+YER+ PIY N +
Sbjct: 294 ADLDDCTRHESKVRKGLQGKLYGLEDLFYKYGVDLQLWAHEHSYERLWPIYNYQVFNGSR 353
Query: 520 HYYKGSLNGTIHIAAGGAGAS--LSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNL-LFEY 576
+ G +HI G AG L+PF WS R ++G+ +L + +++ + +
Sbjct: 354 EMPYTNPRGPVHIITGSAGCEERLTPFAVFPRPWSAVRVKEYGYTRLHILNGTHIHIQQV 413
Query: 577 KKSRDGKVYDSFRISR 592
+DGK+ D + R
Sbjct: 414 SDDQDGKIVDDVWVVR 429
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|A5D6U8|PAPL_DANRE Iron/zinc purple acid phosphatase-like protein OS=Danio rerio GN=papl PE=2 SV=1 | Back alignment and function description |
|---|
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 180/446 (40%), Gaps = 82/446 (18%)
Query: 179 VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPG 238
V N M VTW+S N+ + VE+G GG + +S + T GA R +
Sbjct: 41 VQNSMLVTWSSA---NKTDSVVEYGLWGG-KLFSHSATGNSSIFINEGAEYRVM------ 90
Query: 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY-----PGQDSLQQVIIFG 293
YIH L +L P A Y Y G WS + F A PG +FG
Sbjct: 91 YIHRVLLTDLRPAASYVYHCG-----SGAGWSELFFFTALNESVFFSPG------FALFG 139
Query: 294 DMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQF 349
D+G + SL+ ++ Q + D++ HIGD Y NG I D+F
Sbjct: 140 DLGNENPQ-----------SLSRLQKETQ-IGTYDVILHIGDFAYDLYEDNGRIG--DEF 185
Query: 350 TAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWY 409
QI+ IA+ VPYM GNHE W S Y F +P + WY
Sbjct: 186 MKQIQSIAAYVPYMTCPGNHE--WAFNFSQY-------------RARFSMPGDTEG-LWY 229
Query: 410 STDYGMFRFCIADTEQDW---REGTE----QYRFIEHCLASVDR----QKQPWLIFLAHR 458
S + G TE + G + QY ++ L +R ++PW+I + HR
Sbjct: 230 SWNVGPAHIISFSTEVYFYYLEYGLDLLFRQYEWLRADLQEANRPENRAERPWIITMGHR 289
Query: 459 VLGYSSD--------LSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIY 510
+ S+D SY G L++L+ +Y VD+ ++ H H YER+ P+Y
Sbjct: 290 PMYCSNDDDDDCTHFQSYVRLGRNDTKPPAPGLEELFYQYGVDLELWAHEHTYERLWPVY 349
Query: 511 QNICTNKEKHYYKGSLNGTIHIAAGGAGA--SLSPFTTLQTTWSLYRDYDHGFVKLTAFD 568
N + +HI G AG F WS +R D+G+ +L +
Sbjct: 350 DYKVFNGSSEEPYVNPKAPVHIITGSAGCREKHDGFIPKPRDWSAFRSTDYGYTRLQLIN 409
Query: 569 HSNLLFE-YKKSRDGKVYDSFRISRD 593
+++L E + GKV D + ++
Sbjct: 410 NTHLYLEQVSDDQYGKVIDQMTLVKE 435
|
Danio rerio (taxid: 7955) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 191/462 (41%), Gaps = 86/462 (18%)
Query: 141 SFVLFTNGLLNPKVVAVSNKVTFTNPNA-PVY------PRLAQGKVW------NEMTVTW 187
SF LF L+P V + FT P P++ P+ +V + M VT+
Sbjct: 12 SFSLF---FLSPFVCQANYDSNFTRPPPRPLFIVSHGRPKFYPQQVHISLAGKDHMRVTY 68
Query: 188 TSGYGINEAEPFVEWG--PKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245
T+ +N A VE+G PK D+ + T + T + + G IH +
Sbjct: 69 TTD-DLNVAS-MVEYGKHPKKYDKKTAGEST------------SYTYFFYNSGKIHHVKI 114
Query: 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP--YPGQDSLQQVIIFGDMGKDEADGS 303
L PN Y Y+ G E+ FK P +P + + GD+G+ +
Sbjct: 115 GPLKPNTKYYYRCGGH--------GDEFSFKTPPSKFP-----IEFAVAGDLGQTDW--- 158
Query: 304 NEYNNFQRGSLNTTRQLIQDLK-NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362
T R L Q K + D+ GD+ YA+ + WD F +E +AST P+
Sbjct: 159 ------------TVRTLDQIRKRDFDVFLLPGDLSYADTHQPLWDSFGRLLETLASTRPW 206
Query: 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIAD 422
M+ GNHE + SF N + M + + + + +YS D +
Sbjct: 207 MVTEGNHEIE-----SFPTNDHISFKSYNARWLMPHAESLSHSNLYYSFDVAGVHTVMLG 261
Query: 423 TEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRES 482
+ + ++QY +++ L VDR+K PWL+ + H YS++ ++ EG E M R +
Sbjct: 262 SYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMH-TPWYSTNKAHYGEG---EKM-RSA 316
Query: 483 LQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLS 542
L+ L + +VD+ GHVH YER PIY K G ++I G G
Sbjct: 317 LESLLYRAQVDVVFAGHVHTYERFKPIYNK----------KADPCGPMYITIGDGGNREG 366
Query: 543 ---PFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRD 581
F Q+ S +R+ G +L DH + + ++ D
Sbjct: 367 LALRFKKPQSPLSEFRESSFGHGRLRIIDHKRAHWSWHRNND 408
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 612 | ||||||
| 359472541 | 612 | PREDICTED: probable inactive purple acid | 1.0 | 1.0 | 0.813 | 0.0 | |
| 297738089 | 672 | unnamed protein product [Vitis vinifera] | 1.0 | 0.910 | 0.813 | 0.0 | |
| 224112110 | 614 | predicted protein [Populus trichocarpa] | 1.0 | 0.996 | 0.809 | 0.0 | |
| 18075960 | 612 | putative metallophosphatase [Lupinus lut | 1.0 | 1.0 | 0.790 | 0.0 | |
| 449452841 | 612 | PREDICTED: probable inactive purple acid | 1.0 | 1.0 | 0.787 | 0.0 | |
| 255542026 | 615 | hydrolase, putative [Ricinus communis] g | 0.964 | 0.959 | 0.817 | 0.0 | |
| 363807632 | 613 | probable inactive purple acid phosphatas | 1.0 | 0.998 | 0.774 | 0.0 | |
| 224098974 | 621 | predicted protein [Populus trichocarpa] | 0.998 | 0.983 | 0.771 | 0.0 | |
| 356567597 | 611 | PREDICTED: probable inactive purple acid | 0.982 | 0.983 | 0.780 | 0.0 | |
| 356526862 | 616 | PREDICTED: probable inactive purple acid | 0.982 | 0.975 | 0.775 | 0.0 |
| >gi|359472541|ref|XP_002274118.2| PREDICTED: probable inactive purple acid phosphatase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/612 (81%), Positives = 551/612 (90%)
Query: 1 MRELRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQN 60
MR + L IL L ISH DQPL+KIAIH A FAL D AY+KASP++LG+ GQN
Sbjct: 1 MRVFGASLLAILWALACIEGAISHGDQPLAKIAIHNAKFALHDQAYVKASPTVLGLGGQN 60
Query: 61 SDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQ 120
++++TVE++SP+PSV DWIGVFSP+NFS+STC E+ RV PPLLCSAPIK+QYANY+SP
Sbjct: 61 TEFVTVEFSSPSPSVDDWIGVFSPANFSASTCLPEDIRVTPPLLCSAPIKYQYANYTSPN 120
Query: 121 YKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVW 180
YK+TGKGSLKLQLINQRSDFSF LF+ GL+NPK+VAVSN V F NPNAPVYPRLAQGKVW
Sbjct: 121 YKNTGKGSLKLQLINQRSDFSFALFSGGLVNPKLVAVSNSVAFANPNAPVYPRLAQGKVW 180
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGIN+A PF+EWG KGGD+ SPAGTLTF R SMCGAPA TVGWRDPGYI
Sbjct: 181 NEMTVTWTSGYGINDAAPFIEWGLKGGDKVRSPAGTLTFDRRSMCGAPASTVGWRDPGYI 240
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
HT FL+ELWPN +Y+YKLGHRLFNGTYIWS +YQF+ASPYPGQ+SLQ+V+IFGDMGKDEA
Sbjct: 241 HTSFLKELWPNLVYSYKLGHRLFNGTYIWSQQYQFRASPYPGQNSLQRVVIFGDMGKDEA 300
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN +QRGSLNTT+QLI+DLKNIDIVFHIGDICYANGY+SQWDQFTAQ+E I STV
Sbjct: 301 DGSNEYNQYQRGSLNTTKQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQVESITSTV 360
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
PYMIASGNHERDWPGTGSFYGN+DSGGECGVL E MFYVP ENRAKFWYSTD+GMFRFCI
Sbjct: 361 PYMIASGNHERDWPGTGSFYGNLDSGGECGVLAETMFYVPAENRAKFWYSTDFGMFRFCI 420
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
ADTE DWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSS YA EGSFAEPMGR
Sbjct: 421 ADTEHDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSSSFYAEEGSFAEPMGR 480
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGAS 540
+ LQKLWQKYKVDIA++GHVHNYER CPIYQNICTN+EKHYYKG+LNGTIH+ AGG GAS
Sbjct: 481 DDLQKLWQKYKVDIAMYGHVHNYERTCPIYQNICTNEEKHYYKGTLNGTIHVVAGGGGAS 540
Query: 541 LSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILAC 600
L+ FTT+ T WS+++DYD+GFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISR YRDILAC
Sbjct: 541 LADFTTINTKWSIFKDYDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRGYRDILAC 600
Query: 601 SVDSCPSMTLAS 612
+VDSCPS TLAS
Sbjct: 601 TVDSCPSSTLAS 612
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297738089|emb|CBI27290.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/612 (81%), Positives = 551/612 (90%)
Query: 1 MRELRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQN 60
MR + L IL L ISH DQPL+KIAIH A FAL D AY+KASP++LG+ GQN
Sbjct: 61 MRVFGASLLAILWALACIEGAISHGDQPLAKIAIHNAKFALHDQAYVKASPTVLGLGGQN 120
Query: 61 SDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQ 120
++++TVE++SP+PSV DWIGVFSP+NFS+STC E+ RV PPLLCSAPIK+QYANY+SP
Sbjct: 121 TEFVTVEFSSPSPSVDDWIGVFSPANFSASTCLPEDIRVTPPLLCSAPIKYQYANYTSPN 180
Query: 121 YKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVW 180
YK+TGKGSLKLQLINQRSDFSF LF+ GL+NPK+VAVSN V F NPNAPVYPRLAQGKVW
Sbjct: 181 YKNTGKGSLKLQLINQRSDFSFALFSGGLVNPKLVAVSNSVAFANPNAPVYPRLAQGKVW 240
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGIN+A PF+EWG KGGD+ SPAGTLTF R SMCGAPA TVGWRDPGYI
Sbjct: 241 NEMTVTWTSGYGINDAAPFIEWGLKGGDKVRSPAGTLTFDRRSMCGAPASTVGWRDPGYI 300
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
HT FL+ELWPN +Y+YKLGHRLFNGTYIWS +YQF+ASPYPGQ+SLQ+V+IFGDMGKDEA
Sbjct: 301 HTSFLKELWPNLVYSYKLGHRLFNGTYIWSQQYQFRASPYPGQNSLQRVVIFGDMGKDEA 360
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN +QRGSLNTT+QLI+DLKNIDIVFHIGDICYANGY+SQWDQFTAQ+E I STV
Sbjct: 361 DGSNEYNQYQRGSLNTTKQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQVESITSTV 420
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
PYMIASGNHERDWPGTGSFYGN+DSGGECGVL E MFYVP ENRAKFWYSTD+GMFRFCI
Sbjct: 421 PYMIASGNHERDWPGTGSFYGNLDSGGECGVLAETMFYVPAENRAKFWYSTDFGMFRFCI 480
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
ADTE DWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSS YA EGSFAEPMGR
Sbjct: 481 ADTEHDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSSSFYAEEGSFAEPMGR 540
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGAS 540
+ LQKLWQKYKVDIA++GHVHNYER CPIYQNICTN+EKHYYKG+LNGTIH+ AGG GAS
Sbjct: 541 DDLQKLWQKYKVDIAMYGHVHNYERTCPIYQNICTNEEKHYYKGTLNGTIHVVAGGGGAS 600
Query: 541 LSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILAC 600
L+ FTT+ T WS+++DYD+GFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISR YRDILAC
Sbjct: 601 LADFTTINTKWSIFKDYDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRGYRDILAC 660
Query: 601 SVDSCPSMTLAS 612
+VDSCPS TLAS
Sbjct: 661 TVDSCPSSTLAS 672
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224112110|ref|XP_002316086.1| predicted protein [Populus trichocarpa] gi|222865126|gb|EEF02257.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/613 (80%), Positives = 548/613 (89%), Gaps = 1/613 (0%)
Query: 1 MRELRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQN 60
MR L + ILLVL ++ SH +QPLS+IA+H L +NA IKASPS+LG+KGQN
Sbjct: 2 MRGLELVFFAILLVLATLQVANSHGEQPLSRIAVHNTRLQLFENADIKASPSVLGLKGQN 61
Query: 61 SDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTC-PAENPRVYPPLLCSAPIKFQYANYSSP 119
S+W+T+EY SPNPS DWIGVFSP+NFS+STC P + + PP LC+APIK+QYANYSSP
Sbjct: 62 SEWVTLEYASPNPSNDDWIGVFSPANFSASTCNPDDGSKQAPPFLCTAPIKYQYANYSSP 121
Query: 120 QYKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKV 179
Y+ GKGSL+LQLINQRSDFSFVLF+ GL NPKVVAVSNKV FTNPNAPVYPRLAQGK+
Sbjct: 122 GYRKEGKGSLRLQLINQRSDFSFVLFSGGLTNPKVVAVSNKVAFTNPNAPVYPRLAQGKI 181
Query: 180 WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239
WNEMTVTWTSGYGINEAEPFVEWG K GD SPAGTLTF R SMCGAPARTVGWRDPG+
Sbjct: 182 WNEMTVTWTSGYGINEAEPFVEWGRKDGDHMRSPAGTLTFNRNSMCGAPARTVGWRDPGF 241
Query: 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDE 299
IHT FL+ELWPN++YTYKLGH+LFNGTY+WS YQF+ASPYPGQ S+Q+V+IFGDMGKDE
Sbjct: 242 IHTSFLKELWPNSVYTYKLGHKLFNGTYVWSQVYQFRASPYPGQSSVQRVVIFGDMGKDE 301
Query: 300 ADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359
ADGSNEYNNFQRGSLNTT+QLIQDLKNIDIVFHIGDICYANGY+SQWDQFTAQ+EPIAST
Sbjct: 302 ADGSNEYNNFQRGSLNTTKQLIQDLKNIDIVFHIGDICYANGYLSQWDQFTAQVEPIAST 361
Query: 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFC 419
VPYMIASGNHERDWPGTGSFYGN DSGGECGVL E MFYVP ENRAKFWYSTDYGMFRFC
Sbjct: 362 VPYMIASGNHERDWPGTGSFYGNSDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC 421
Query: 420 IADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMG 479
IADTE DWREGTEQY+FIEHCLAS DRQKQPWLIFLAHRVLGYSS YA +GSF EPMG
Sbjct: 422 IADTEHDWREGTEQYKFIEHCLASADRQKQPWLIFLAHRVLGYSSATWYADQGSFEEPMG 481
Query: 480 RESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGA 539
RESLQKLWQKYKVDIA++GHVHNYER CPIYQNICT+KEK +YKG+LNGTIH+ AGG GA
Sbjct: 482 RESLQKLWQKYKVDIAMYGHVHNYERTCPIYQNICTSKEKFFYKGTLNGTIHVVAGGGGA 541
Query: 540 SLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILA 599
SL+ FT + TTWS ++D+D+GFVKLTAFDHSNLLFEYKKSRDG+VYDSF+ISRDYRDILA
Sbjct: 542 SLADFTPINTTWSYFKDHDYGFVKLTAFDHSNLLFEYKKSRDGEVYDSFKISRDYRDILA 601
Query: 600 CSVDSCPSMTLAS 612
C+VDSCPSMTLAS
Sbjct: 602 CTVDSCPSMTLAS 614
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18075960|emb|CAD12837.1| putative metallophosphatase [Lupinus luteus] | Back alignment and taxonomy information |
|---|
Score = 1050 bits (2716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/612 (79%), Positives = 547/612 (89%)
Query: 1 MRELRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQN 60
M + + + LG LLV +L SH D PLSK++IH+A +L D A+IK SP ILG++GQ
Sbjct: 1 MGDSKFVFLGYLLVCSVLQLVWSHGDHPLSKVSIHRASLSLLDLAHIKVSPPILGLQGQT 60
Query: 61 SDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQ 120
++W+T+EY+SP PS+ DWIGVFSPSNFS+S CPAEN RVYPPLLCSAPIK+QYANYS+PQ
Sbjct: 61 AEWVTLEYSSPIPSIDDWIGVFSPSNFSASACPAENRRVYPPLLCSAPIKYQYANYSNPQ 120
Query: 121 YKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVW 180
Y +TGKG LKLQLINQRSDFSF +F+ GL NPKVVA+SNK++F NPNAPVYPRLA GK+W
Sbjct: 121 YSATGKGILKLQLINQRSDFSFAMFSGGLSNPKVVAISNKISFANPNAPVYPRLAMGKLW 180
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGINEA+P V+WGPKGGD +SPAGTLTF + S+CGAPARTVGWRDPG+I
Sbjct: 181 NEMTVTWTSGYGINEADPLVQWGPKGGDHIHSPAGTLTFTKDSLCGAPARTVGWRDPGFI 240
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
HT +L+ELWPN +Y YK+GHRL NGTYIWS YQF+A+P+PGQ SLQ+V IFGDMGKDE
Sbjct: 241 HTSYLKELWPNRIYEYKIGHRLNNGTYIWSQNYQFRAAPFPGQKSLQRVAIFGDMGKDEV 300
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYNNFQRGSLNTT+QLIQDL+NID+VFHIGDI YANGY+SQWDQFTAQ+EPIAS V
Sbjct: 301 DGSNEYNNFQRGSLNTTQQLIQDLENIDMVFHIGDISYANGYLSQWDQFTAQVEPIASAV 360
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
PYMIASG+HERDWPGTGSFY NMDSGGECGVL + MFYVP NRAKFWY DYGMFRF I
Sbjct: 361 PYMIASGSHERDWPGTGSFYENMDSGGECGVLAQIMFYVPASNRAKFWYPIDYGMFRFRI 420
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
ADTE DWREGTEQY+FIEHCLASVDRQKQPWLIFLAHRVLGYSS + YA EGSFAEPMGR
Sbjct: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSCICYAEEGSFAEPMGR 480
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGAS 540
ESLQKLWQKYKVDIA++GHVHNYER CPIYQNICT++EKH+YKG+LNGTIHI AGGAGAS
Sbjct: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTSEEKHHYKGTLNGTIHIVAGGAGAS 540
Query: 541 LSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILAC 600
LS FT+L+T WS+++DYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSF+ISRDYRDILAC
Sbjct: 541 LSTFTSLKTKWSIFKDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFKISRDYRDILAC 600
Query: 601 SVDSCPSMTLAS 612
+VDSCP TLAS
Sbjct: 601 TVDSCPRTTLAS 612
|
Source: Lupinus luteus Species: Lupinus luteus Genus: Lupinus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449452841|ref|XP_004144167.1| PREDICTED: probable inactive purple acid phosphatase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1044 bits (2700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/612 (78%), Positives = 541/612 (88%)
Query: 1 MRELRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQN 60
MR L +CLGIL +L SH + P SKIAI K FAL+ +A +KASPS+LG+KG+N
Sbjct: 1 MRFLGFVCLGILWILATLHQVKSHGNHPFSKIAIRKTTFALNKHANVKASPSVLGLKGEN 60
Query: 61 SDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQ 120
++W+T+EY+SP+PS DWIGVFSP+NFSSSTCP ENPRVYPPLLCSAPIKF +ANY++
Sbjct: 61 TEWVTLEYSSPDPSSDDWIGVFSPANFSSSTCPVENPRVYPPLLCSAPIKFLFANYTNAN 120
Query: 121 YKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVW 180
YK+TG+G LKLQLINQR+DFSF LF+ GL PKVVA+SN+VTF NP+AP+YPRLAQGK W
Sbjct: 121 YKTTGRGLLKLQLINQRADFSFALFSGGLSKPKVVAISNRVTFANPDAPLYPRLAQGKNW 180
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGI+EAEP V W G D SPAGTLTF R SMCGAPART GWRDPG+I
Sbjct: 181 NEMTVTWTSGYGIDEAEPLVAWSQNGKDLMQSPAGTLTFDRNSMCGAPARTEGWRDPGFI 240
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
HT FL+ELWPN YTYKLGH+L NGTYIWSS Y+FKASPYPGQ+SLQ+V+IFGDMGKDEA
Sbjct: 241 HTSFLKELWPNQEYTYKLGHKLNNGTYIWSSTYKFKASPYPGQNSLQRVVIFGDMGKDEA 300
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYNNFQRGSLNTTRQLI+DLKNIDIVFHIGDICYANGY+SQWDQFTAQI PIASTV
Sbjct: 301 DGSNEYNNFQRGSLNTTRQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQIGPIASTV 360
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
PYMIASGNHERDWPG+GSFY MDSGGECGV+ +NMFYVP ENR KFWY+TDYGMFRFC+
Sbjct: 361 PYMIASGNHERDWPGSGSFYDTMDSGGECGVVAQNMFYVPAENREKFWYATDYGMFRFCV 420
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
A+TE DWREGTEQY+FIEHCL+SVDRQKQPWLIFLAHRVLGYSS YA +GS +EPMGR
Sbjct: 421 ANTELDWREGTEQYKFIEHCLSSVDRQKQPWLIFLAHRVLGYSSCTFYAEQGSSSEPMGR 480
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGAS 540
ESLQ LWQKYKVD+A++GHVH+YER CPIYQNICTN++KHYYKG LNGTIH+ AGG GAS
Sbjct: 481 ESLQSLWQKYKVDLAIYGHVHSYERTCPIYQNICTNEKKHYYKGPLNGTIHVVAGGGGAS 540
Query: 541 LSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILAC 600
LSPF +LQT WS++RDYD+GFVKLTAFDHSNLLFEYKKS DGKVYDSFRISRDYRDILAC
Sbjct: 541 LSPFISLQTKWSIFRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 600
Query: 601 SVDSCPSMTLAS 612
+VDSCP TLAS
Sbjct: 601 AVDSCPRTTLAS 612
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542026|ref|XP_002512077.1| hydrolase, putative [Ricinus communis] gi|223549257|gb|EEF50746.1| hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/592 (81%), Positives = 532/592 (89%), Gaps = 2/592 (0%)
Query: 23 SHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNSDWLTVEYNSPNPSVGDWIGVF 82
S QP S+IA HK F+L+ NAY+KASPSILG++GQNS+W+TVEY S NPS+ DWIGVF
Sbjct: 24 SQGGQPFSRIAFHKTTFSLNGNAYVKASPSILGIRGQNSEWITVEYTSTNPSIADWIGVF 83
Query: 83 SPSNFSSSTCPAENP--RVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKLQLINQRSDF 140
SP+NFS+S+C E+ +V PP LCSAP+KFQYANYSSP YK TGKGSL+L+LINQRSDF
Sbjct: 84 SPANFSASSCNPESSSSKVAPPFLCSAPVKFQYANYSSPGYKDTGKGSLRLRLINQRSDF 143
Query: 141 SFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFV 200
SF LF+ GL NPK+VAVSN V F NPNAPVYPRLAQGK+WNEMTVTWTSGYGINEAEPFV
Sbjct: 144 SFALFSGGLGNPKLVAVSNIVAFANPNAPVYPRLAQGKIWNEMTVTWTSGYGINEAEPFV 203
Query: 201 EWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGH 260
EWGPKGGD SPAGTLTF SMCG+PARTVGWRDPG+IHT FL+ELWPN +Y YKLGH
Sbjct: 204 EWGPKGGDLKRSPAGTLTFTPNSMCGSPARTVGWRDPGFIHTSFLKELWPNVLYKYKLGH 263
Query: 261 RLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQL 320
+L NGTYIWS +YQF+ASPYPGQ SLQ+V+IFGDMGKDE DGSNEYNNFQ GSLNTT+QL
Sbjct: 264 KLLNGTYIWSQDYQFRASPYPGQSSLQRVVIFGDMGKDEIDGSNEYNNFQHGSLNTTKQL 323
Query: 321 IQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFY 380
IQDLKNIDIVFHIGDICYANGYISQWDQFT+Q+EPIASTVPYMIASGNHERDWPGTGSFY
Sbjct: 324 IQDLKNIDIVFHIGDICYANGYISQWDQFTSQVEPIASTVPYMIASGNHERDWPGTGSFY 383
Query: 381 GNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHC 440
GN DSGGECGV + MFYVPTENR FWYSTDYGMFRFCIADTE DWREGTEQY+FIEHC
Sbjct: 384 GNTDSGGECGVPAQTMFYVPTENRDNFWYSTDYGMFRFCIADTEHDWREGTEQYKFIEHC 443
Query: 441 LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHV 500
LASVDRQKQPWL+FLAHRVLGYSS YA EGSF EPMGRESLQKLWQKYKVDIA++GHV
Sbjct: 444 LASVDRQKQPWLVFLAHRVLGYSSASWYADEGSFEEPMGRESLQKLWQKYKVDIAIYGHV 503
Query: 501 HNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHG 560
HNYER CPIYQNICTN+EKH YKG+LNGTIH+ AGG GASL+ FTT+ TTWS ++D+D+G
Sbjct: 504 HNYERTCPIYQNICTNQEKHSYKGALNGTIHVVAGGGGASLADFTTINTTWSYFKDHDYG 563
Query: 561 FVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILACSVDSCPSMTLAS 612
FVKLTAFDHSNLLFEYKKSRDGKVYDSF+ISRDYRDILAC+VDSCPS TLAS
Sbjct: 564 FVKLTAFDHSNLLFEYKKSRDGKVYDSFKISRDYRDILACTVDSCPSTTLAS 615
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|363807632|ref|NP_001242158.1| probable inactive purple acid phosphatase 1-like precursor [Glycine max] gi|304421410|gb|ADM32504.1| purple acid phosphatases [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/613 (77%), Positives = 536/613 (87%), Gaps = 1/613 (0%)
Query: 1 MRELRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQN 60
M E + + L LLV + SH PLSK+A+HKA +L D AYIKASP++LG++ Q
Sbjct: 1 MGESKFVSLAFLLVCLVVQRVWSHGYHPLSKVAVHKATVSLLDLAYIKASPAVLGLQEQT 60
Query: 61 SDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQ 120
++W+T+EY+SP PS+GDWIGVFSP+NFS+STCP EN RVYPPLLCSAPIK+QYANYSSP
Sbjct: 61 AEWVTLEYSSPIPSIGDWIGVFSPANFSASTCPKENRRVYPPLLCSAPIKYQYANYSSPL 120
Query: 121 YKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVW 180
YK TGKG LKL LINQRSDFSF LF+ GL NPK+VAVS+K+ F NPNAP+YPRLA GK W
Sbjct: 121 YKETGKGFLKLLLINQRSDFSFALFSGGLSNPKLVAVSDKIAFANPNAPLYPRLALGKSW 180
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGIN+AEPFV+WGPK GDR +SPA TLTF R SMCGAPARTVGWRDPGYI
Sbjct: 181 NEMTVTWTSGYGINDAEPFVQWGPKEGDRMHSPAETLTFTRDSMCGAPARTVGWRDPGYI 240
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
HT L+ELWPN +Y Y++GH+L N TYIWS YQF A P PGQ SLQ+V+IFGDMGK E
Sbjct: 241 HTSHLKELWPNKIYEYRIGHKLNNVTYIWSGNYQFTAPPCPGQKSLQRVVIFGDMGKGEV 300
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYNNFQ GS+NTT+QLIQDL++IDIVFHIGDICYANGY+ QWDQFTAQ+EPIAS V
Sbjct: 301 DGSNEYNNFQHGSINTTQQLIQDLEDIDIVFHIGDICYANGYLPQWDQFTAQVEPIASAV 360
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
PYMIASGNHERDWPGTGSFY NMDSGGECGVL + MFY P NRAK WYS DYGMFRFCI
Sbjct: 361 PYMIASGNHERDWPGTGSFYENMDSGGECGVLAQTMFYTPASNRAKLWYSIDYGMFRFCI 420
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
ADTE DWREGTEQY+FIEHCLASVDRQKQPW+IFLAHRVLGYSS + YA EGSFAEPMGR
Sbjct: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWIIFLAHRVLGYSSCICYAEEGSFAEPMGR 480
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKG-SLNGTIHIAAGGAGA 539
ES QKLWQKYKVDIA++GHVHNYER CPIYQNICTN+EKH+YKG +LNGTIH+ AGG GA
Sbjct: 481 ESFQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNEEKHHYKGRTLNGTIHVVAGGGGA 540
Query: 540 SLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILA 599
SLS FT+L+T WS+++DYD+GFVKLTAFDHSNLLFEYKKSRDGKVYDSF+ISRDYRDILA
Sbjct: 541 SLSAFTSLKTKWSIFKDYDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFKISRDYRDILA 600
Query: 600 CSVDSCPSMTLAS 612
C++DSCPS+T+AS
Sbjct: 601 CTMDSCPSITMAS 613
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224098974|ref|XP_002311341.1| predicted protein [Populus trichocarpa] gi|222851161|gb|EEE88708.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/622 (77%), Positives = 537/622 (86%), Gaps = 11/622 (1%)
Query: 1 MRELRSICLGILLVLGAF-RLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQ 59
MR L + LVL ++T SH +QPLS+I + L +NAY+KASPSILG+KGQ
Sbjct: 1 MRGLGLVFFAFFLVLATLLQVTTSHGEQPLSRIVVQNTELHLSENAYVKASPSILGLKGQ 60
Query: 60 NSDWLTVEYNSPNPSVGDWIGVFSPSNFSS--------STC-PAENPRVYPPLLCSAPIK 110
N +W+T+EY SPNPS+ DWIGVFSP++FS+ STC P + ++ PP LC+APIK
Sbjct: 61 NFEWVTLEYASPNPSIDDWIGVFSPADFSAYFLSISTASTCTPDDGSKLAPPFLCTAPIK 120
Query: 111 FQYANYSSPQYKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPV 170
+QYANYSSP Y+ TGKGSL+LQLINQRSDFS VLF+ GL NPK++AVSNKV FTNPNAPV
Sbjct: 121 YQYANYSSPGYRKTGKGSLRLQLINQRSDFSSVLFSGGLSNPKLMAVSNKVAFTNPNAPV 180
Query: 171 YPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPAR 230
YPRLAQGK+WNEMTVTWT GYGINEAEPFVEWG K GDR +S AGTLTF R S+CGAPAR
Sbjct: 181 YPRLAQGKIWNEMTVTWTCGYGINEAEPFVEWGQKDGDRMHSLAGTLTFDRNSLCGAPAR 240
Query: 231 TVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVI 290
TVGWRDPG+IHT FL+ELWPNA+YTYKLGH+LFNGTY+WS EYQF+ASPYPGQ S+Q+V+
Sbjct: 241 TVGWRDPGFIHTSFLKELWPNAVYTYKLGHKLFNGTYVWSQEYQFRASPYPGQSSVQRVV 300
Query: 291 IFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT 350
IFGDMGKDEADGSNEYNN+QRGSLNTT+QL QDLKNIDIVFHIGDICYANGY+SQWDQFT
Sbjct: 301 IFGDMGKDEADGSNEYNNYQRGSLNTTKQLSQDLKNIDIVFHIGDICYANGYLSQWDQFT 360
Query: 351 AQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYS 410
AQ+EPIASTVPYM+ASGNHERDWPGTGSFYGN DSGGECGVL E MFYVP ENRA FWYS
Sbjct: 361 AQVEPIASTVPYMVASGNHERDWPGTGSFYGNSDSGGECGVLAETMFYVPAENRANFWYS 420
Query: 411 TDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAV 470
TDYGM RFC ADTE DWRE TEQY+FIEHCLASVDRQKQPWLIFLAHRVLGYS YA
Sbjct: 421 TDYGMLRFCRADTEHDWREATEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSFSTFYAD 480
Query: 471 EGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTI 530
EGSF EPMGRESLQKLWQKYKVDIA++GH HNYER CPIYQNICT+KEK YYKG+LNGTI
Sbjct: 481 EGSFEEPMGRESLQKLWQKYKVDIAIYGHAHNYERTCPIYQNICTSKEKSYYKGALNGTI 540
Query: 531 HIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRI 590
H+ AGG GASL+ FT + TTWS ++D+D+GFVKLTAFDHSNLL EYKKSRDGK YDSF+I
Sbjct: 541 HV-AGGGGASLADFTPINTTWSYFKDHDYGFVKLTAFDHSNLLLEYKKSRDGKFYDSFKI 599
Query: 591 SRDYRDILACSVDSCPSMTLAS 612
SR YRDI C+VDSCPSMTLAS
Sbjct: 600 SRGYRDITVCTVDSCPSMTLAS 621
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567597|ref|XP_003552004.1| PREDICTED: probable inactive purple acid phosphatase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1020 bits (2638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/601 (78%), Positives = 533/601 (88%)
Query: 12 LLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNSDWLTVEYNSP 71
+LVL F+ +S E QPLSK+AIHK ALD+ A+IKA+P++LG+KGQN++W+T++Y++P
Sbjct: 11 MLVLATFQKAVSEEHQPLSKVAIHKTTLALDERAFIKATPNVLGLKGQNTEWVTLQYSNP 70
Query: 72 NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKL 131
P+V DWIGVFSP+NF++STCPAEN V PP LCSAPIK+QYAN+SS YK+TGKGSLKL
Sbjct: 71 KPTVDDWIGVFSPANFNASTCPAENIWVNPPFLCSAPIKYQYANFSSHGYKNTGKGSLKL 130
Query: 132 QLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGY 191
QLINQRSDFSF LFT GL NPK+VAVSNKV+F NPNAPVYPRLAQGK W+EMTVTWTSGY
Sbjct: 131 QLINQRSDFSFALFTGGLTNPKLVAVSNKVSFINPNAPVYPRLAQGKTWDEMTVTWTSGY 190
Query: 192 GINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPN 251
I++AEPFVEWGPKGG+ SPAGTLTF R +MCGAPARTVGWRDPGYIHT FL+ELWPN
Sbjct: 191 EISDAEPFVEWGPKGGNLVKSPAGTLTFDRNTMCGAPARTVGWRDPGYIHTSFLKELWPN 250
Query: 252 AMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQR 311
Y YKLGH+LFNGT IWS EYQFKASPYPGQ+SLQ+V+IFGDMGK EADGSNEYNNFQ
Sbjct: 251 REYKYKLGHKLFNGTIIWSQEYQFKASPYPGQNSLQRVVIFGDMGKAEADGSNEYNNFQP 310
Query: 312 GSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHER 371
GSLNTT+Q+IQDLK+IDIVF+IGD+ YANGY+SQWDQFTAQIEPIASTVPYM ASGNHER
Sbjct: 311 GSLNTTKQIIQDLKDIDIVFNIGDLSYANGYLSQWDQFTAQIEPIASTVPYMTASGNHER 370
Query: 372 DWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGT 431
DWP TGSFYGN+DSGGECGVL + MFYVP ENR KFWYS DYGMFRFCIA+TE DWR+G+
Sbjct: 371 DWPDTGSFYGNLDSGGECGVLAQTMFYVPAENREKFWYSVDYGMFRFCIANTELDWRKGS 430
Query: 432 EQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK 491
EQY+FIE+CLASVDRQKQPWLIFLAHRVLGYSS Y EGSF EPMGRE LQ LWQKYK
Sbjct: 431 EQYKFIENCLASVDRQKQPWLIFLAHRVLGYSSAGFYVAEGSFEEPMGREDLQYLWQKYK 490
Query: 492 VDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTW 551
VDIA++GHVHNYER CP+YQNICTNKE+H YKGSL+GTIH+ GG GASL+ F + TTW
Sbjct: 491 VDIAMYGHVHNYERTCPVYQNICTNKEEHNYKGSLDGTIHVVVGGGGASLAEFAPINTTW 550
Query: 552 SLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILACSVDSCPSMTLA 611
S+++D+D GFVKLTAFDHSNLLFEYKKS DG+VYDSF+ISR YRDILAC+VDSCP TLA
Sbjct: 551 SIFKDHDFGFVKLTAFDHSNLLFEYKKSSDGQVYDSFKISRQYRDILACTVDSCPPTTLA 610
Query: 612 S 612
S
Sbjct: 611 S 611
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526862|ref|XP_003532035.1| PREDICTED: probable inactive purple acid phosphatase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/601 (77%), Positives = 533/601 (88%)
Query: 12 LLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNSDWLTVEYNSP 71
LLVL F+ +S E QPLSK+AIHK ALD+ AYIKA+PS+LG+KGQN++W+T++Y++P
Sbjct: 16 LLVLATFQQVVSDEHQPLSKVAIHKTTLALDERAYIKATPSVLGLKGQNTEWVTLQYSNP 75
Query: 72 NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKL 131
P++ DWIGVFSP+NF++STCPAEN V PP LCSAPIK+QYAN+SS YK+TGKGSLKL
Sbjct: 76 KPTIDDWIGVFSPANFNASTCPAENIWVNPPFLCSAPIKYQYANFSSHGYKNTGKGSLKL 135
Query: 132 QLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGY 191
QLINQRSDFSF LFT GL NPK+VAVSNKV+F NPNAPVYPRLAQGK W+E+TVTWTSGY
Sbjct: 136 QLINQRSDFSFALFTGGLTNPKLVAVSNKVSFINPNAPVYPRLAQGKTWDEITVTWTSGY 195
Query: 192 GINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPN 251
GI++AEPFVEWGPKGG+ SPAGTLTF +MCGAPARTVGWRDPGYIHT FL+ELWPN
Sbjct: 196 GISDAEPFVEWGPKGGNLVKSPAGTLTFDHNTMCGAPARTVGWRDPGYIHTSFLKELWPN 255
Query: 252 AMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQR 311
Y YKLGHRLFNGT IWS EYQFKASP+PGQ+SLQ+V+IFGD+GK EADGSNEYNNFQ
Sbjct: 256 QEYKYKLGHRLFNGTIIWSQEYQFKASPFPGQNSLQRVVIFGDLGKAEADGSNEYNNFQP 315
Query: 312 GSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHER 371
GSLNTT+Q++QDLK+IDIVFHIGD+CYA+GY+SQWDQFTAQIEPIASTVPYM ASGNHER
Sbjct: 316 GSLNTTKQIVQDLKDIDIVFHIGDLCYASGYLSQWDQFTAQIEPIASTVPYMTASGNHER 375
Query: 372 DWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGT 431
DWP TGSFYG +DSGGECGV + FYVP ENR KFWYS DYGMFRFCIA+TE DWR+G+
Sbjct: 376 DWPDTGSFYGTLDSGGECGVPAQTTFYVPAENREKFWYSVDYGMFRFCIANTELDWRKGS 435
Query: 432 EQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK 491
EQY+FIE+CLA+VDRQKQPWLIFLAHRVLGYSS YA EGSF EPMGRE LQ LWQKYK
Sbjct: 436 EQYKFIENCLATVDRQKQPWLIFLAHRVLGYSSAGFYAAEGSFEEPMGREDLQYLWQKYK 495
Query: 492 VDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTW 551
VDIA++GHVHNYER CP+YQNICTNKEK+ YKGSL+GTIH+ GG GASL+ F + TTW
Sbjct: 496 VDIAMYGHVHNYERTCPVYQNICTNKEKNNYKGSLDGTIHVVVGGGGASLAEFAPINTTW 555
Query: 552 SLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILACSVDSCPSMTLA 611
S+++D+D GFVKLTAFDHSN LFEYKKS DG+VYDSFRISR+YRDILAC+VDSCP+ TLA
Sbjct: 556 SIFKDHDFGFVKLTAFDHSNFLFEYKKSSDGQVYDSFRISREYRDILACTVDSCPATTLA 615
Query: 612 S 612
S
Sbjct: 616 S 616
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 612 | ||||||
| TAIR|locus:2023870 | 613 | AT1G13750 [Arabidopsis thalian | 1.0 | 0.998 | 0.740 | 3.6e-263 | |
| TAIR|locus:2177547 | 611 | PAP27 "purple acid phosphatase | 0.980 | 0.981 | 0.670 | 6.8e-230 | |
| TAIR|locus:2117353 | 615 | PAP24 "purple acid phosphatase | 0.983 | 0.978 | 0.638 | 1.4e-222 | |
| DICTYBASE|DDB_G0281861 | 594 | DDB_G0281861 [Dictyostelium di | 0.421 | 0.434 | 0.367 | 1.6e-57 | |
| TAIR|locus:2014839 | 656 | PAP2 "AT1G13900" [Arabidopsis | 0.720 | 0.672 | 0.328 | 2.1e-52 | |
| TAIR|locus:2063777 | 651 | PAP9 "purple acid phosphatase | 0.537 | 0.505 | 0.329 | 1e-51 | |
| DICTYBASE|DDB_G0268222 | 492 | DDB_G0268222 "acid phosphatase | 0.622 | 0.774 | 0.270 | 1.3e-24 | |
| FB|FBgn0030245 | 458 | CG1637 [Drosophila melanogaste | 0.513 | 0.685 | 0.28 | 2.5e-23 | |
| DICTYBASE|DDB_G0282559 | 431 | dduA "N-terminal purple acid p | 0.540 | 0.767 | 0.269 | 7.5e-23 | |
| WB|WBGene00219316 | 496 | F21A3.11 [Caenorhabditis elega | 0.468 | 0.578 | 0.281 | 2.8e-20 |
| TAIR|locus:2023870 AT1G13750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2532 (896.4 bits), Expect = 3.6e-263, P = 3.6e-263
Identities = 454/613 (74%), Positives = 520/613 (84%)
Query: 1 MRE-LRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQ 59
MRE L +I + ++ VLGA SHEDQPLS IA+HK F L++ AY+KASP++LG GQ
Sbjct: 1 MRESLVAILVTVISVLGAIHQVKSHEDQPLSGIAVHKITFGLNEKAYVKASPTVLGSNGQ 60
Query: 60 NSDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSP 119
+S+ + V+Y+SP PS DWIGVFSP++F++STCP +N V PP LCSAP+KFQYAN+S+P
Sbjct: 61 HSELVLVQYSSPKPSDDDWIGVFSPADFNASTCPGDNKMVQPPRLCSAPVKFQYANFSNP 120
Query: 120 QYKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKV 179
+Y +TG GSLKLQLINQRSDFSF LF+ GLLNPK+VA+SNKV F NPNAPVYPRLA GK
Sbjct: 121 RYTNTGTGSLKLQLINQRSDFSFALFSGGLLNPKLVAISNKVAFENPNAPVYPRLALGKE 180
Query: 180 WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239
W+EMTVTWTSGYG+N AEP VEWG KGG+R SPAGTLTF R SMCGAPARTVGWRDPGY
Sbjct: 181 WDEMTVTWTSGYGLNLAEPVVEWGVKGGERKLSPAGTLTFARNSMCGAPARTVGWRDPGY 240
Query: 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDE 299
IHT FL+ELWPN+ YTY++GHRL NG IWS EYQFK+SP+PGQ+S+QQV+IFGDMGK E
Sbjct: 241 IHTAFLKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPGQNSVQQVVIFGDMGKAE 300
Query: 300 ADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359
DGS+EYN+FQR SLNTT+QLI+DLK D VFHIGDICYANGY+SQWDQF AQIEPIAST
Sbjct: 301 VDGSSEYNDFQRASLNTTKQLIKDLKKTDAVFHIGDICYANGYLSQWDQFIAQIEPIAST 360
Query: 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFC 419
VPYMIASGNHER WP +GSFY +DSGGECGV E MFYVP +NRAK WYS+DYGMFRFC
Sbjct: 361 VPYMIASGNHERVWPNSGSFYEGLDSGGECGVPAETMFYVPAQNRAKVWYSSDYGMFRFC 420
Query: 420 IADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMG 479
+ADTE DWREGTEQY FIEHCLASVDRQKQPWLIFLAHRVLGYSS YA EGSFAEPMG
Sbjct: 421 VADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSSTYFYAEEGSFAEPMG 480
Query: 480 RESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIXXXXXXX 539
RESLQKLWQKYKVDIA++GH HNYER CP+YQ++CT+ EK YK LNGTIHI
Sbjct: 481 RESLQKLWQKYKVDIAIYGHAHNYERTCPVYQSVCTSHEKSNYKAPLNGTIHIVAGGGGA 540
Query: 540 SLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILA 599
L+ F+ LQ WSL+RDYD+GF+KLTA DHSNLLFEYKKS DG+V+DSF IS+DYRDILA
Sbjct: 541 GLAEFSDLQPNWSLFRDYDYGFLKLTAIDHSNLLFEYKKSSDGRVHDSFTISKDYRDILA 600
Query: 600 CSVDSCPSMTLAS 612
C+VDSCP+ TLAS
Sbjct: 601 CAVDSCPATTLAS 613
|
|
| TAIR|locus:2177547 PAP27 "purple acid phosphatase 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2218 (785.8 bits), Expect = 6.8e-230, P = 6.8e-230
Identities = 407/607 (67%), Positives = 475/607 (78%)
Query: 12 LLVLGAF--RLTISHE----DQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNSDWLT 65
LLVL F +++ SHE DQ LS+I I+ A +A+I SP +LG +GQ+++W+
Sbjct: 6 LLVLLWFIVQVSSSHENGRGDQALSQIDIYAINLAQHHSAFIHVSPLVLGSQGQDTEWVN 65
Query: 66 VEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKSTG 125
V ++P PS DW+GVFSP+ F SS+C + + P +CSAP+K+ YA SSP Y TG
Sbjct: 66 VVISNPEPSSDDWVGVFSPAKFDSSSCAPTDDKEIAPFICSAPVKYMYAK-SSPDYMKTG 124
Query: 126 KGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTV 185
LK LINQR+DFSF LFT GL NP +V+VSN V+F NP APVYPRLA GK W+EMTV
Sbjct: 125 NAVLKFMLINQRADFSFALFTGGLSNPTLVSVSNHVSFINPKAPVYPRLALGKKWDEMTV 184
Query: 186 TWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245
TWTSGY I EA PFVEW KG SPAGTLTF R SMCGAPARTVGWRDPG+IHT L
Sbjct: 185 TWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTLTFTRNSMCGAPARTVGWRDPGFIHTASL 244
Query: 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNE 305
++LWPN YTY++GH L NG+ +WS + FK+SPYPGQDSLQ+VIIFGDMGK E DGSNE
Sbjct: 245 KDLWPNLKYTYRMGHELMNGSIVWSKNFTFKSSPYPGQDSLQRVIIFGDMGKGERDGSNE 304
Query: 306 YNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365
YN++Q GSLNTT QLI+DLKNIDIVFHIGDI YANGYISQWDQFTAQ+EPIASTVPYM+A
Sbjct: 305 YNDYQPGSLNTTDQLIKDLKNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMVA 364
Query: 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ 425
SGNHERDWP +GSFYG DSGGECGV E MF P EN+AKFWYS DYGMFRFC+ADTE
Sbjct: 365 SGNHERDWPDSGSFYGGKDSGGECGVPAETMFDFPAENKAKFWYSADYGMFRFCVADTEH 424
Query: 426 DWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQK 485
DWREG+EQY+FIE CLASVDR+ QPWLIF+AHRVLGYS++ Y EGSF EPMGRESLQK
Sbjct: 425 DWREGSEQYQFIERCLASVDRRAQPWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQK 484
Query: 486 LWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIXXXXXXXSLSPFT 545
LWQKYKVDIA +GHVHNYER CPIYQN C + EK +Y G+ GTIH+ LS F+
Sbjct: 485 LWQKYKVDIAFYGHVHNYERTCPIYQNQCMDNEKSHYSGAFKGTIHVVVGGAGSHLSSFS 544
Query: 546 TLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILACSVDSC 605
+L+ WS++RDYD+GFVKLTAFDHS+LLFEYKKS +G V+DSF I R+YRD+LAC DSC
Sbjct: 545 SLKPKWSIFRDYDYGFVKLTAFDHSSLLFEYKKSSNGAVHDSFTIFREYRDVLACVRDSC 604
Query: 606 PSMTLAS 612
TLAS
Sbjct: 605 EPTTLAS 611
|
|
| TAIR|locus:2117353 PAP24 "purple acid phosphatase 24" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2149 (761.5 bits), Expect = 1.4e-222, P = 1.4e-222
Identities = 390/611 (63%), Positives = 466/611 (76%)
Query: 9 LGILLVLGAF---RLTISHE----DQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNS 61
LG+LL L A L + H DQ L++I +++ ALD + + ASP +LG +G+++
Sbjct: 5 LGVLLCLLALFSSSLCLDHANGRGDQALAQINVYETSLALDSSVKLHASPQVLGSQGEDT 64
Query: 62 DWLTVEYNSPNPSVGDWIGVFSPSNFSSSTC-PAENPRVYPPLLCSAPIKFQYANYSSPQ 120
+W+ + ++P P+ DWIGVFSP+ F S C P + P +CS+PIK+ Y N S P
Sbjct: 65 EWVNLAISNPKPTSDDWIGVFSPAKFDSGNCWPTSGGKEKTPYICSSPIKYMYCN-SHPD 123
Query: 121 YKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVW 180
Y +G +LK Q+INQR+D SF LF+NG+ P ++ VSN V F NP APVYPRLA GK W
Sbjct: 124 YMKSGNVTLKFQIINQRADVSFALFSNGVQEPHLLGVSNPVAFFNPKAPVYPRLALGKNW 183
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
+EMTVTWTSGY I+EA PF+EW KG SPAGTLTF R SMCG PAR VGWRDPG+
Sbjct: 184 DEMTVTWTSGYNIDEAVPFIEWSAKGLPARRSPAGTLTFNRNSMCGNPARGVGWRDPGFF 243
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
HT FL+ELWPN Y Y+LGH L NG+ IWS Y F +SPYPGQDS Q+VIIFGDMGK E
Sbjct: 244 HTSFLKELWPNREYIYRLGHDLVNGSTIWSKNYTFVSSPYPGQDSKQRVIIFGDMGKGER 303
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN++Q GSLNTT Q+I+DLK+IDIVFHIGD+ Y+NGY+SQWDQFTAQ++PIASTV
Sbjct: 304 DGSNEYNDYQPGSLNTTDQVIKDLKDIDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTV 363
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
PYMIASGNHERDWP TGSFY DSGGECGV E MFY P ENRAKFWY TDYGMFRFC+
Sbjct: 364 PYMIASGNHERDWPDTGSFYAGTDSGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCV 423
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
AD+E DWREGTEQY+FIE+CLA+VDR+ QPWLIF+AHRVLGYS++ Y EG+F EPMGR
Sbjct: 424 ADSEHDWREGTEQYKFIENCLATVDRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGR 483
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIXXXXXXXS 540
ESLQKLWQKYKVD+A +GHVHNYER CPIY++ C N +K +Y G+ GTIH+
Sbjct: 484 ESLQKLWQKYKVDLAFYGHVHNYERTCPIYESQCVNNDKDHYSGTFKGTIHVVVGGAGSH 543
Query: 541 LSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDILAC 600
LSPF++L WSL RDYD GFVKLTA DHS+LLFEYKKS G+VYDSF ISRDYRD+LAC
Sbjct: 544 LSPFSSLVPKWSLVRDYDFGFVKLTASDHSSLLFEYKKSSTGQVYDSFNISRDYRDVLAC 603
Query: 601 SVDSCPSMTLA 611
+ DSC T A
Sbjct: 604 THDSCEPTTSA 614
|
|
| DICTYBASE|DDB_G0281861 DDB_G0281861 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 423 (154.0 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 101/275 (36%), Positives = 148/275 (53%)
Query: 330 VFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPG-----TGSFYGNMD 384
V HIGDI YA G WD F ++PI S VPYM++ GNHE D+ G + S YG+ D
Sbjct: 325 VHHIGDISYARGKAFIWDYFMDSMQPIVSKVPYMVSIGNHEYDFIGQPFAPSWSNYGS-D 383
Query: 385 SGGECGVLVENMFYVP-TENRAK-FWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLA 442
SGGECGV F++ E+ + W+S + G F + E D+ G+ Q+ ++ + LA
Sbjct: 384 SGGECGVPYSKRFHMTGAEDSTRNLWFSYENGPIHFTVMSAEHDFLPGSPQFEWLNNDLA 443
Query: 443 SVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHN 502
SVDR+K PW+IF HR L Y+S L GS RE+++ L+QKY VD+A++GHVH
Sbjct: 444 SVDREKTPWVIFSGHRPL-YTSALPEDSIGSITAL--REAIEPLFQKYDVDMALWGHVHI 500
Query: 503 YERICPIYQNI-CTNKEK----HYYKGSLNGTIHIXXXXXXXSLSPFTTLQTTWSLYRDY 557
YER C N C + + H G T + S + WS++R
Sbjct: 501 YERTCGFIGNFTCADNDNDGTVHVIIGMAGNTYSVPWEGSDISSGNGHEDEPEWSIFRSI 560
Query: 558 DHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISR 592
+G V+ A + ++L FE+ + V+DSF +++
Sbjct: 561 SYGHVRFYA-NTTSLYFEFVGNHRSIVHDSFWLNK 594
|
|
| TAIR|locus:2014839 PAP2 "AT1G13900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 170/518 (32%), Positives = 258/518 (49%)
Query: 38 VFALDDNAYIKASPSILGMKGQNSDWLTVEYNS-PNPSVGDWIGVFSPSNFSSSTCPAEN 96
V + D A I SP+ L G D + ++++ +PS DW+G++SP P E+
Sbjct: 17 VSSADSKATISISPNALNRSG---DSVVIQWSGVDSPSDLDWLGLYSP--------P-ES 64
Query: 97 PRVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKLQLINQRSDFSFVLF--TNGLLNPK- 153
P + I +++ N SS +K G GS+ L L N RS+++F +F + ++PK
Sbjct: 65 PNDHF-------IGYKFLNESST-WKD-GFGSISLPLTNLRSNYTFRIFRWSESEIDPKH 115
Query: 154 -------------VVAVSNKVTF-TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPF 199
++A S ++TF + P L+ + N M V + +G G E F
Sbjct: 116 KDHDQNPLPGTKHLLAESEQLTFGSGVGMPEQIHLSFTNMVNTMRVMFVAGDG---EERF 172
Query: 200 VEWGPKGGDRTYSPAGT-LTFGRGSMCGAPAR-TVGWRDPGYIHTGFLRELWPNAMYTYK 257
V +G S A + + R MC +PA T+GWRDPG+I ++ L Y Y+
Sbjct: 173 VRYGESKDLLGNSAAARGMRYEREHMCDSPANSTIGWRDPGWIFDTVMKNLNDGVRYYYQ 232
Query: 258 LGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTT 317
+G + + WS + + A ++++ +FGDMG A + Q S++T
Sbjct: 233 VG----SDSKGWSEIHSYIARDVTAEETV--AFMFGDMGC--ATPYTTFIRTQDESISTV 284
Query: 318 RQLIQDLKNID----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERD- 372
+ +++D++ + ++ HIGDI YA GY WD+F AQ+EPIASTVPY + GNHE D
Sbjct: 285 KWILRDIEALGDKPAMISHIGDISYARGYSWVWDEFFAQVEPIASTVPYHVCIGNHEYDF 344
Query: 373 ----W-PG-TGSFYGNMDSGGECGVLVENMFYVP------TENRA----KFWYSTDYGMF 416
W P S YGN D GGECGV F +P T +A +YS D G
Sbjct: 345 STQPWKPDWAASIYGN-DGGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYYSYDMGTV 403
Query: 417 RFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAE 476
F TE ++ +G QY FI+ L SVDR+K P+++ HR + Y++ S V +
Sbjct: 404 HFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPM-YTT--SNEVRDTMIR 460
Query: 477 PMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNIC 514
E L+ L+ K V +A++GHVH YER CPI N C
Sbjct: 461 QKMVEHLEPLFVKNNVTLALWGHVHRYERFCPISNNTC 498
|
|
| TAIR|locus:2063777 PAP9 "purple acid phosphatase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 376 (137.4 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 131/398 (32%), Positives = 192/398 (48%)
Query: 39 FALDDNAYIKASPSILGMK-GQNSDWLTVEYNS-PNPSVGDWIGVFSPSNFSSSTCPAEN 96
F L + Y KA+ SI ++ D + ++++ +PS DW+G++SP P ++
Sbjct: 12 FLLISSVYSKATISISPQTLNRSGDIVVIKWSGVESPSDLDWLGIYSP--------P-DS 62
Query: 97 PRVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKLQLINQRSDFSFVLF--TNGLLNPK- 153
P + I +++ + SP ++S G GS+ L L N RS+++F +F T +NPK
Sbjct: 63 PHDHF-------IGYKFLS-DSPTWQS-GSGSISLPLTNLRSNYTFRIFHWTQSEINPKH 113
Query: 154 -------------VVAVSNKVTFTNP-NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPF 199
++ SN++ F N P L+ NEM V + +G G E E
Sbjct: 114 QDHDHNPLPGTRHLLTESNQLNFRFAVNRPEQIHLSYTDNINEMRVVFVTGDG-EERE-- 170
Query: 200 VEWGP-KGGDRTYSPAGTLTFGRGSMCGAPAR-TVGWRDPGYIHTGFLRELWPNAMYTYK 257
+G K + A + + MC APA TVGWRDPG+ ++ L Y Y+
Sbjct: 171 ARYGEVKDKLDNIAVARGVRYEIEHMCHAPANSTVGWRDPGWTFDAVMKNLKQGIRYYYQ 230
Query: 258 LGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRG---SL 314
+G L G WS + F + +++L +FGDMG Y F RG SL
Sbjct: 231 VGSDL-KG---WSEIHSFVSRNEGSEETL--AFMFGDMGC-----YTPYTTFIRGEEESL 279
Query: 315 NTTRQLIQDLKNID-----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNH 369
+T + +++D++ + IV HIGDI YA GY WD+F QIEPIAS VPY + GNH
Sbjct: 280 STVKWILRDIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEPIASKVPYHVCIGNH 339
Query: 370 ERDWPG-------TGSFYGNMDSGGECGVLVENMFYVP 400
E DWP YG DSGGECGV F +P
Sbjct: 340 EYDWPNQPWKPDWAAYVYGK-DSGGECGVPYSVKFNMP 376
|
|
| DICTYBASE|DDB_G0268222 DDB_G0268222 "acid phosphatase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 298 (110.0 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 118/437 (27%), Positives = 188/437 (43%)
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
+EM ++W + I +A V++ D A T G ++ G W+ GY
Sbjct: 91 SEMMISWFTNGKIGDA--IVQFSESKSDLINYSANTNN-GVITVNGKSTTFSNWK--GYS 145
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
++ L L P Y Y+ G N I S F S +P + G K
Sbjct: 146 NSVVLTGLSPKTTYYYQCGGSSSN---ILSQTNYFTTSNFPTTTTANTS---GKNVKSTT 199
Query: 301 DGSNEYNNFQR---------GSLNTTRQLIQD-LKNIDIVFHIGDICYAN-GYISQ---- 345
+ + F G N T ++I++ L ++ HIGDI YA+ + Q
Sbjct: 200 TDNFQVTPFTAAVYADMGYGGGYNNTVKVIEENLSKYSLILHIGDIAYADYNKVEQGNQT 259
Query: 346 -WDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR 404
W F +EPI S VPYM A GNH+ FY + +S +N F +P +
Sbjct: 260 IWTNFLQALEPITSKVPYMTAPGNHD-------VFY-SFNS-------YQNTFNMPGSSN 304
Query: 405 AKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQP--WLIFLAHRVLGY 462
WYS DY F TE D T+QY++I++ L + R+K P W+I AHR
Sbjct: 305 QP-WYSYDYNGVHFLSYSTESDLAPFTQQYQWIKNDLETY-RKKNPSGWVIAYAHRPYYC 362
Query: 463 SSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYY 522
S+ + + + + + ++ +L+Q Y VDI + GH H YER P+YQ + Y
Sbjct: 363 STQMDWCRKQTL-RALIESTIGELFQNYNVDIYLAGHTHAYERTVPVYQQSPIGT--YEY 419
Query: 523 KGSLNGTIH--IXXXXXXXSLSPFTTLQT-TWSLYRDYDHGFVKLTAFDHSNLLFEYKKS 579
G GT+H I L L +WS R + G+ +L +++++L+++
Sbjct: 420 PG---GTVHFTIGTPGNQEGLDHNWILPAPSWSASRFGELGYGQLNVVNNTHILWQFLTD 476
Query: 580 RDGKVYDSFRISRDYRD 596
+ ++D I + Y D
Sbjct: 477 QQ-VIFDEQWIVKGYFD 492
|
|
| FB|FBgn0030245 CG1637 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 293 (108.2 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 105/375 (28%), Positives = 165/375 (44%)
Query: 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKD 298
+IH LR+L PNA Y+Y G + WS+ +QF+ P D + I+GDMG +
Sbjct: 108 FIHRVTLRDLEPNATYSYHCG-----SDFGWSAIFQFRTVPSASVDWSPSLAIYGDMGNE 162
Query: 299 EADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICY-ANGYISQ-WDQFTAQIEPI 356
A + R T R + D + H+GD Y N ++ D+F QIE +
Sbjct: 163 NAQ------SLARLQQETQRGMY------DAIIHVGDFAYDMNTKNARVGDEFMRQIETV 210
Query: 357 ASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYV----PTEN---RAKFWY 409
A+ +PYM+ GNHE + ++ G G ENMFY P + +Y
Sbjct: 211 AAYLPYMVVPGNHEEKF-NFSNYRARFSMPG--GT--ENMFYSFDLGPVHFVGISTEVYY 265
Query: 410 STDYGMFRFCIADTEQDW-REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSS---- 464
+YG+ + +W RE + E+ R K+PW+I HR + S+
Sbjct: 266 FLNYGLKPLVF---QFEWLREDLAKANLPEN------RNKRPWIILYGHRPMYCSNENDN 316
Query: 465 DLSYA-----VEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTN--- 516
D +++ V F G E L L++ + VD+A++ H H+YER+ PIY N
Sbjct: 317 DCTHSETLTRVGWPFVHMFGLEPL--LYE-FGVDVAIWAHEHSYERLWPIYDYKVRNGTL 373
Query: 517 KEKHYYKGSLNGTIHIXXXXXX--XSLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLF 574
K+ Y S +HI PF WS + D+G+ +L A + +++ F
Sbjct: 374 KDSPYNDPS--APVHIVTGSAGCKEGREPFKGKIPEWSAFHSQDYGYTRLKAHNRTHIHF 431
Query: 575 EY-KKSRDGKVYDSF 588
E ++G + D F
Sbjct: 432 EQVSDDKNGAIIDDF 446
|
|
| DICTYBASE|DDB_G0282559 dduA "N-terminal purple acid phosphatase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 287 (106.1 bits), Expect = 7.5e-23, P = 7.5e-23
Identities = 104/386 (26%), Positives = 172/386 (44%)
Query: 231 TVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY--P-GQDSLQ 287
T+G+ G I+T + L P+ MY Y +G + N IWSS + F + + P G+
Sbjct: 80 TIGF--DGKINTAVMSSLSPSTMYFYCVGDKSLN---IWSSIFNFTTNQFDAPFGKVIPF 134
Query: 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN------- 340
FGDMG E D N + T LI + I I+ H+GDI YA+
Sbjct: 135 TTSFFGDMGWIEGDSLNS-------DVYTVDNLISRINEIQILHHVGDIAYADKQKPYNL 187
Query: 341 -GYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYV 399
G + W++F I P++S +PY+ GNH+R F + V + + +
Sbjct: 188 PGNQTIWNKFQNSISPLSSHLPYLTCPGNHDR-------FI-------DLSVYTKT-WQM 232
Query: 400 PTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQP--WLIFLAH 457
P + + WYS DY F +E D+ + Q+ +IE+ L R+ P W++ +H
Sbjct: 233 PVDFESDSWYSYDYNGIHFVGFSSEHDYFPLSSQHTWIENDLKQY-RKSNPNGWIVMYSH 291
Query: 458 RVLGYSS---DLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQN-I 513
R Y S D ++ ++ + SL+ L KY VD+ + GH H+YER P+++N I
Sbjct: 292 RPF-YCSVVWDWCSNIDVVESKKIYLWSLEDLLYKYNVDLFISGHAHSYERTLPVFKNKI 350
Query: 514 CTNKEKHYYKGSLNGTIHIXXXXXXXSLSPFTTLQTT--WSL-YRDYDHGFVKLTAFDHS 570
+ E S T+HI Q + W+ R +GF L + +
Sbjct: 351 MGDVE------SPKATVHIVVGTGGDVEGEDMIWQPSQQWTTGLRTSINGFGLLNVINST 404
Query: 571 NLLFEYKKSRDGKVYDSFRISRDYRD 596
L +++ + + + D F +++ D
Sbjct: 405 TLNWQFVANINNTIIDEFNLTKGQFD 430
|
|
| WB|WBGene00219316 F21A3.11 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 268 (99.4 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 94/334 (28%), Positives = 142/334 (42%)
Query: 282 GQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQL--IQDLKN---IDIVFHIGDI 336
G D I F K+ DG Y + + R L IQ + +D+V H+GD
Sbjct: 127 GSDHGWSPIFFFTALKEREDGGFIYAVYGDLGVENGRSLGHIQKMAQKGQLDMVLHVGDF 186
Query: 337 CY----ANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVL 392
Y +NG D+F QIEP+A +PYM GNHE +Y N
Sbjct: 187 AYNMDESNGETG--DEFFRQIEPVAGYIPYMATVGNHE--------YYNNFTH------- 229
Query: 393 VENMFYVPTENRAKFWYSTDYGMFRFCIADTE----QDW--REGTEQYRFIEHCL--ASV 444
N F +P F YS D G F + TE W + QY ++ + L A+
Sbjct: 230 YVNRFTMPNSEHNLF-YSYDVGPVHFVVFSTEFYFYTQWGYHQMENQYNWLINDLKKANS 288
Query: 445 DRQKQPWLIFLAHRVLGYSSDLS------YAVEGSFAEPMGRE-SLQKLWQKYKVDIAVF 497
+R PW+I + HR + Y SD Y P+ +L+KL+ +Y VD+ ++
Sbjct: 289 NRHNIPWIITMGHRPM-YCSDFDGDDCTKYESVIRTGLPLTHGYALEKLFYEYGVDVELW 347
Query: 498 GHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIXXXXXX--XSLSPFTTLQTTWSLYR 555
H H+YER+ P+Y N +H Y +HI + F WS R
Sbjct: 348 AHEHSYERLWPVYNRTVYNGTRHPYVDP-PAPVHIITGSAGCRENTDVFVEHPPPWSAVR 406
Query: 556 DYDHGFVKLTAFDHSNLLF-EYKKSRDGKVYDSF 588
D+GF + ++ ++L F + +++GK+ D F
Sbjct: 407 STDYGFGVMRVYNSTHLNFKQINVAQEGKIDDDF 440
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LMX4 | PPA1_ARATH | No assigned EC number | 0.7487 | 1.0 | 0.9983 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 612 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 3e-88 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 9e-22 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 1e-20 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-14 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 2e-04 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 0.004 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 275 bits (706), Expect = 3e-88
Identities = 108/313 (34%), Positives = 157/313 (50%), Gaps = 30/313 (9%)
Query: 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQ- 345
+ +FGDMG++ + S NT L ++L N D + H+GD+ YA+GY +
Sbjct: 5 FKFAVFGDMGQNTNN-----------STNTLDHLEKELGNYDAILHVGDLAYADGYNNGS 53
Query: 346 -WDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR 404
WD F QIEP+AS VPYM+ GNHE D+ + + P+ +
Sbjct: 54 RWDTFMRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFFP-------RFRFPHSPSGST 106
Query: 405 AKFWYSTDYGMFRFCIADTEQDWR---EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLG 461
+ WYS D G F TE D+ G+ QY ++E LA VDR K PW+I + HR +
Sbjct: 107 SNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPM- 165
Query: 462 YSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHY 521
Y S+ + + R +L+ L+ KY VD+ + GHVH YER CP+Y Y
Sbjct: 166 YCSNTDHDDCIEGEK--MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPY 223
Query: 522 YKGSLNGTIHIAAGGAGA--SLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKS 579
G +HI G G L PF+ WS +R+ D+GF +LT + ++L FE+ ++
Sbjct: 224 SNP--KGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRN 281
Query: 580 RDGKVYDSFRISR 592
DG V DSF I +
Sbjct: 282 DDGVVIDSFWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 88.3 bits (220), Expect = 9e-22
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 527 NGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYD 586
+HI G AG L PF Q WS +RD D+G+ +LT + ++L +E+ +S DG V D
Sbjct: 1 KAPVHIVVGAAGNGLDPFPDPQPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDDGTVLD 60
Query: 587 SF 588
SF
Sbjct: 61 SF 62
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 94.4 bits (234), Expect = 1e-20
Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 54/352 (15%)
Query: 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP--YPGQDSLQQVIIFGDM 295
G I+ + L PN +Y YK G + T E+ F+ P +P + + GD+
Sbjct: 100 GQINDVVIGPLKPNTVYYYKCGGP--SST----QEFSFRTPPSKFP-----IKFAVSGDL 148
Query: 296 GKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355
G E + + +L + + D+ GD+ YAN Y WD F ++P
Sbjct: 149 GTSE---------WTKSTLEHVSK-----WDYDVFILPGDLSYANFYQPLWDTFGRLVQP 194
Query: 356 IASTVPYMIASGNHERD-----WPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYS 410
+AS P+M+ GNHE + P + Y M + + + + +YS
Sbjct: 195 LASQRPWMVTHGNHELEKIPILHPEKFTAYNAR----------WRMPFEESGSTSNLYYS 244
Query: 411 TDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAV 470
+ + + D+ G+EQY+++E+ L +DR+ PW++ + H Y+S+ ++
Sbjct: 245 FNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSNEAHQG 303
Query: 471 EGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTI 530
E +ES++ L K +VD+ GHVH YER +YQ T+K Y I
Sbjct: 304 EKESVGM--KESMETLLYKARVDLVFAGHVHAYERFDRVYQGK-TDKCGPVY-------I 353
Query: 531 HIAAGGAGASLS-PFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRD 581
I GG L+ + + SL+R+ G +L D + + + + ++ D
Sbjct: 354 TIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDD 405
|
Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 71.7 bits (175), Expect = 2e-14
Identities = 36/215 (16%), Positives = 58/215 (26%), Gaps = 31/215 (14%)
Query: 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQ 348
+++ GD+ L +L+ + K D+V +GD+ S
Sbjct: 2 ILVIGDLH---------GGLDDLDLLLLLLELLGEPKP-DLVLFLGDLVDRGPP-SLEVL 50
Query: 349 FTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFW 408
+ + P + GNH D+ S G
Sbjct: 51 ALLFALKLKAPGPVYLVRGNH--DFDSGNSELGFYL-------------ECAGLPYVLGN 95
Query: 409 YSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSY 468
G + G F+E + I L H S L
Sbjct: 96 GDVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHG--PLSPSLDS 153
Query: 469 AVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503
G G E+L+ L + VD+ + GH H
Sbjct: 154 ---GDDIYLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 32/152 (21%), Positives = 51/152 (33%), Gaps = 30/152 (19%)
Query: 428 REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLW 487
+ EQ ++E LA+ W I + H + YSS + L L
Sbjct: 148 KLAEEQLAWLEKTLAAS---TADWKIVVGHHPI-YSSGEHGPTSCL------VDRLLPLL 197
Query: 488 QKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAG---ASLSPF 544
+KYKVD + GH HN + + K +GT + +G S+
Sbjct: 198 KKYKVDAYLSGHDHNLQ----------------HIKDDGSGTSFVVSGAGSKARPSVKHI 241
Query: 545 TTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEY 576
+ +S + GF L L +
Sbjct: 242 DKVPQFFSGFTSSGGGFAYLE-LTKEELTVRF 272
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 37.7 bits (87), Expect = 0.004
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 318 RQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHE 370
+ + D V +GD+ +G + A + +P + GNH+
Sbjct: 18 EAALAAAEKPDFVLVLGDLVG-DGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 612 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.98 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.94 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.9 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.9 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.88 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.87 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.86 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.83 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.79 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.66 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.65 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.65 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.64 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.61 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.6 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.54 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.51 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.44 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.44 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.43 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.42 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.4 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.33 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.3 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.29 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.23 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.12 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.07 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.06 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 98.96 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.9 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 98.82 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.75 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 98.73 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.72 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.71 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.71 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.69 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.65 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.6 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.58 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 98.58 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.57 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.57 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.51 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.47 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.45 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.44 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.35 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.34 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.3 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.26 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.26 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.23 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.19 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.12 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 97.98 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 97.93 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.92 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 97.82 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 97.81 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.79 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 97.76 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 97.76 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 97.7 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 97.69 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 97.69 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 97.62 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.62 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.58 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.57 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.52 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 97.47 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.42 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.12 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.07 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.03 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.0 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 96.99 | |
| PHA02239 | 235 | putative protein phosphatase | 96.98 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.92 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 96.85 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.85 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 96.83 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 96.72 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 96.7 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.65 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 96.58 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 96.55 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.49 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.4 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.4 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.36 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.36 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.29 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.24 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 96.21 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 95.8 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 95.72 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 95.69 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 95.67 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 95.63 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 95.51 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 95.42 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 95.11 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 95.09 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 94.65 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 94.59 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 93.4 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 93.28 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 93.23 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 93.01 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 92.89 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 92.58 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 92.17 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 91.84 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 91.7 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 91.28 | |
| KOG3513 | 1051 | consensus Neural cell adhesion molecule L1 [Signal | 91.05 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 91.02 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 90.94 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 90.93 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 90.79 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 90.06 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 89.95 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 87.84 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 87.42 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 85.51 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 84.27 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 82.3 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 81.41 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-77 Score=628.76 Aligned_cols=399 Identities=41% Similarity=0.714 Sum_probs=331.3
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCcccc-CcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSP-AGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~-~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.++|+|+||++++..++|+|+|.|.+. ....|+||...+...... .+.. ..+|+.... +|+..|++|+|+
T Consensus 42 ~~~peQvhlS~~~~~~~m~VswvT~~~---~~~~V~Yg~~~~~~~~~~~~~~~----~~~~~~y~~--~~~~sg~ih~~~ 112 (452)
T KOG1378|consen 42 VNSPEQVHLSFTDNLNEMRVSWVTGDG---EENVVRYGEVKDKLDNSAARGMT----EAWTDGYAN--GWRDSGYIHDAV 112 (452)
T ss_pred CCCCCeEEEeccCCCCcEEEEEeCCCC---CCceEEEeecCCCccccccccce----EEEeccccc--ccceeeeEeeee
Confidence 367999999999998899999999964 348999997654422221 1111 122332222 567899999999
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL 324 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~ 324 (612)
|++|+|+|+|+||||++ ..||++|+|+|+| +++.+.+|+++||||...... .+.....+.
T Consensus 113 ~~~L~~~t~YyY~~Gs~-----~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~-------------s~~~~~~~~ 172 (452)
T KOG1378|consen 113 MKNLEPNTRYYYQVGSD-----LKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT-------------STLRNQEEN 172 (452)
T ss_pred ecCCCCCceEEEEeCCC-----CCcccceEeECCC--CccCceeEEEEcccccccccc-------------chHhHHhcc
Confidence 99999999999999986 3499999999998 445679999999999876421 233333333
Q ss_pred CCCCEEEEcCccccCCCcc-cHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCC-
Q 007227 325 KNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE- 402 (612)
Q Consensus 325 ~~pdfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~- 402 (612)
.++|+|||+|||+|++++. .+||+|++++||+++.+|||++.||||++++... |+.+|..||.||.+
T Consensus 173 ~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-----------~F~~y~~Rf~mP~~~ 241 (452)
T KOG1378|consen 173 LKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-----------CFVPYSARFNMPGNS 241 (452)
T ss_pred cCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCcc-----------cccccceeeccCCCc
Confidence 4799999999999999998 6999999999999999999999999999976543 55788999999954
Q ss_pred --CCCceEEEEEeCCEEEEEEcCCCCC--CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCC-ccCCCCccch
Q 007227 403 --NRAKFWYSTDYGMFRFCIADTEQDW--REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLS-YAVEGSFAEP 477 (612)
Q Consensus 403 --~~~~~yYsfd~G~v~Fi~LDT~~~~--~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~-~~~~~~~~~~ 477 (612)
...++|||||+|+||||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|+|+ |++... +..+|.. +.
T Consensus 242 s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~-Y~S~~~~~~reG~~-~~ 319 (452)
T KOG1378|consen 242 SESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPM-YCSSNDAHYREGEF-ES 319 (452)
T ss_pred CCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccc-eecCCchhhccCcc-hh
Confidence 3456999999999999999999985 457899999999999999888999999999999 666542 3445543 24
Q ss_pred hhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCC--CCCCCCCCCCceeee
Q 007227 478 MGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGAS--LSPFTTLQTTWSLYR 555 (612)
Q Consensus 478 ~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~--l~~~~~~~~~ws~~~ 555 (612)
+ |..||+||.+++||++|+||+|+|||+||++|.+|....+..+..++.|||||++|.||+. +..+..++|+||++|
T Consensus 320 ~-~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~~~~p~~Sa~R 398 (452)
T KOG1378|consen 320 M-REGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFSSPQPEWSAFR 398 (452)
T ss_pred h-HHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcccCCCCcccccc
Confidence 4 7899999999999999999999999999999999987665555568899999999999964 556666899999999
Q ss_pred eCCceEEEEEEecCCeEEEEEEEC--CCCcEEEEEEEEecCCCcccccccCCCC
Q 007227 556 DYDHGFVKLTAFDHSNLLFEYKKS--RDGKVYDSFRISRDYRDILACSVDSCPS 607 (612)
Q Consensus 556 ~~~~Gy~~l~v~n~~~L~~~~~~~--~dG~v~D~f~i~k~~~~~~~~~~~~~~~ 607 (612)
..+|||++|+++|+|++.++++++ .+|++.|+|+|.|++.+...|....|.+
T Consensus 399 ~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~~~~~~~~ 452 (452)
T KOG1378|consen 399 EGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVGVLLGCIP 452 (452)
T ss_pred cccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCccccccccccCC
Confidence 999999999999999999999985 3478999999999999999999988863
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-70 Score=590.22 Aligned_cols=379 Identities=26% Similarity=0.441 Sum_probs=310.4
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcc-eEEeccccCCCCCccccccCCCeEEE
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGT-LTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
+++..|.|+|||+++ +++|+|+|.|... ..+.|+||++++....++.++ .+|... ..| .+|++|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~---~~~~V~yG~~~~~l~~~a~g~~~~~~~~---------~~~-~~g~iH~ 104 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDS---IPPSVVYGTVSGKYEGSANGTSSSYHYL---------LIY-RSGQIND 104 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCC---CCCEEEEecCCCCCcceEEEEEEEEecc---------ccc-cCCeEEE
Confidence 477899999999996 8999999999964 458999999877655554443 456521 123 4799999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHH
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ 322 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~ 322 (612)
|+|+||+|+|+|+|||+.. .+|+.++|+|+|.. .++||+++||+|.... ...+++.+.+
T Consensus 105 v~l~~L~p~T~Y~Yrvg~~------~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~------------~~~tl~~i~~ 163 (427)
T PLN02533 105 VVIGPLKPNTVYYYKCGGP------SSTQEFSFRTPPSK---FPIKFAVSGDLGTSEW------------TKSTLEHVSK 163 (427)
T ss_pred EEeCCCCCCCEEEEEECCC------CCccceEEECCCCC---CCeEEEEEEeCCCCcc------------cHHHHHHHHh
Confidence 9999999999999999853 25889999998863 4699999999986431 1245666654
Q ss_pred hcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCC
Q 007227 323 DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE 402 (612)
Q Consensus 323 ~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~ 402 (612)
.+||||||+||++|++++..+|++|++.++++++.+|+|+++||||.+... ....+....|..+|.||..
T Consensus 164 --~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~--------~~~~~~f~~y~~rf~mP~~ 233 (427)
T PLN02533 164 --WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIP--------ILHPEKFTAYNARWRMPFE 233 (427)
T ss_pred --cCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccc--------cccCcCccchhhcccCCcc
Confidence 689999999999999988889999999999999999999999999986321 0112233567789999963
Q ss_pred ---CCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhh
Q 007227 403 ---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMG 479 (612)
Q Consensus 403 ---~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~ 479 (612)
...+.||||++|++|||+||++.++..+++|++||+++|++++|+++||+||++|+|+ |+++..+..+. ....+
T Consensus 234 ~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~-y~s~~~~~~~~-~~~~~- 310 (427)
T PLN02533 234 ESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSNEAHQGEK-ESVGM- 310 (427)
T ss_pred ccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCe-eecccccCCcc-hhHHH-
Confidence 2357899999999999999999988888999999999999998888999999999999 87754332111 11234
Q ss_pred HHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCC---CCCCCCCCCceeeee
Q 007227 480 RESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASL---SPFTTLQTTWSLYRD 556 (612)
Q Consensus 480 r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l---~~~~~~~~~ws~~~~ 556 (612)
|+.|++||.+++|||+|+||+|.|||++|++++++ .+.||+|||+|+||+.. ..+..++|+|+++|.
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~----------~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~ 380 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYERFDRVYQGKT----------DKCGPVYITIGDGGNREGLATKYIDPKPDISLFRE 380 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceecccccccccCCcc----------CCCCCEEEEeCCCccccccccccCCCCCCceeEEe
Confidence 88999999999999999999999999999999876 34799999999999874 345567899999999
Q ss_pred CCceEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEecCCCccccc
Q 007227 557 YDHGFVKLTAFDHSNLLFEYKKSRDGK--VYDSFRISRDYRDILACS 601 (612)
Q Consensus 557 ~~~Gy~~l~v~n~~~L~~~~~~~~dG~--v~D~f~i~k~~~~~~~~~ 601 (612)
.+|||++|++.|.++|+++|+++.+|+ +.|+|||+|-... -+|.
T Consensus 381 ~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~-~~~~ 426 (427)
T PLN02533 381 ASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTE-PGCN 426 (427)
T ss_pred ccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccCC-CccC
Confidence 999999999999999999999977764 8999999997655 4453
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-47 Score=396.99 Aligned_cols=282 Identities=38% Similarity=0.674 Sum_probs=223.4
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcc--cHHHHHHHhhhccccCCCe
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~--~~wd~f~~~i~~l~~~vP~ 362 (612)
.++||+++||+|... ..+.+++++++++..+|||||++||++|+.+.. .+|+.|++.++++.+.+|+
T Consensus 3 ~~~~f~v~gD~~~~~-----------~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 71 (294)
T cd00839 3 TPFKFAVFGDMGQNT-----------NNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPY 71 (294)
T ss_pred CcEEEEEEEECCCCC-----------CCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCc
Confidence 359999999999752 123567888877556899999999999988765 7899999999999999999
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccccccccC---CCCCCceEEEEEeCCEEEEEEcCCCCC---CCCHHHHHH
Q 007227 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVP---TENRAKFWYSTDYGMFRFCIADTEQDW---REGTEQYRF 436 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P---~~~~~~~yYsfd~G~v~Fi~LDT~~~~---~~g~~Q~~W 436 (612)
++++||||........+... ...++.++ .....+.||+|++|++|||+|||+... ..+.+|++|
T Consensus 72 ~~~~GNHD~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 72 MVTPGNHEADYNFSFYKIKA----------FFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred EEcCcccccccCCCCccccc----------ccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99999999975432111100 00012222 223467899999999999999998765 567899999
Q ss_pred HHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceecc
Q 007227 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTN 516 (612)
Q Consensus 437 L~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~ 516 (612)
|+++|+++++.+.+|+||++|+|+ |++....... ...... ++.|++||++|+|+++|+||+|.|+|++|+++++|.
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~-~~~~~~-~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~- 217 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPM-YCSNTDHDDC-IEGEKM-RAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV- 217 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCc-EecCcccccc-chhHHH-HHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec-
Confidence 999999986667799999999999 7765432211 011233 889999999999999999999999999999999886
Q ss_pred CCCccccCCCCCeEEEEECCCCCCCCCCCCC--CCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCcEEEEEEEEe
Q 007227 517 KEKHYYKGSLNGTIHIAAGGAGASLSPFTTL--QTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISR 592 (612)
Q Consensus 517 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~--~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~v~D~f~i~k 592 (612)
.......+++|++|||+|+||+.++..... .++|++++..++||++|++.++++|+++++.+.+|+|+|+|+|.|
T Consensus 218 -~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~i~k 294 (294)
T cd00839 218 -GDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFWIIK 294 (294)
T ss_pred -cccccccCCCccEEEEECCCccccCcCcccCCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEEEeC
Confidence 222222467899999999999998654332 358999999999999999988789999999999999999999986
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=298.13 Aligned_cols=271 Identities=17% Similarity=0.256 Sum_probs=191.7
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCc----ccHHHH-HHHhhhccc--
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQ-FTAQIEPIA-- 357 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~----~~~wd~-f~~~i~~l~-- 357 (612)
..++|+++||+|.+.. .|....+.|.++.++ .++|||+.+||+. .+|. ..+|+. |-+.+.+..
T Consensus 25 ~~l~F~~vGDwG~g~~--------~Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~ 94 (394)
T PTZ00422 25 AQLRFASLGNWGTGSK--------QQKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGD 94 (394)
T ss_pred CeEEEEEEecCCCCch--------hHHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchh
Confidence 3489999999996432 133334455555554 6899999999998 5653 456665 333344433
Q ss_pred cCCCeEEccCCCccCCCCCCC--CCCC----CCCCC--ccc--cccccccccCCCCCCceEEEE----Ee----------
Q 007227 358 STVPYMIASGNHERDWPGTGS--FYGN----MDSGG--ECG--VLVENMFYVPTENRAKFWYST----DY---------- 413 (612)
Q Consensus 358 ~~vP~~~~~GNHD~~~~~~~~--~y~~----~dsgg--e~g--~~~~~~f~~P~~~~~~~yYsf----d~---------- 413 (612)
.++||++++||||+..+.... .|.. .+.-. +.. .....||.||. .||++ ..
T Consensus 95 L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~-----~yY~~~~~f~~~~~~~~~~~~ 169 (394)
T PTZ00422 95 MQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN-----YWYHYFTHFTDTSGPSLLKSG 169 (394)
T ss_pred hCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc-----hhheeeeeeeccccccccccc
Confidence 579999999999986432211 0110 00000 000 01136888984 47754 22
Q ss_pred ---CCEEEEEEcCCCC-----C-CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHH
Q 007227 414 ---GMFRFCIADTEQD-----W-REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQ 484 (612)
Q Consensus 414 ---G~v~Fi~LDT~~~-----~-~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~ 484 (612)
..+.||++||... + .....|++||+++|+.. ++.++|+||++|||+ |+++.+ +.. ..+ ++.|+
T Consensus 170 ~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPI-ySsG~h-g~~----~~L-~~~L~ 241 (394)
T PTZ00422 170 HKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPI-YSSGSS-KGD----SYL-SYYLL 241 (394)
T ss_pred CCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCce-eecCCC-CCC----HHH-HHHHH
Confidence 1289999999632 1 12468999999999753 356789999999999 998653 221 234 88999
Q ss_pred HHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEE
Q 007227 485 KLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKL 564 (612)
Q Consensus 485 ~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l 564 (612)
|||++|+||++|+||+|+|||.. .+++.||++|+||...... ....+|+.|....+||+.+
T Consensus 242 PLL~ky~VdlYisGHDH~lq~i~------------------~~gt~yIvSGaGs~~~~~~-~~~~~~s~F~~~~~GF~~~ 302 (394)
T PTZ00422 242 PLLKDAQVDLYISGYDRNMEVLT------------------DEGTAHINCGSGGNSGRKS-IMKNSKSLFYSEDIGFCIH 302 (394)
T ss_pred HHHHHcCcCEEEEccccceEEec------------------CCCceEEEeCccccccCCC-CCCCCCcceecCCCCEEEE
Confidence 99999999999999999999973 2478899999998765432 2346778888899999999
Q ss_pred EEecCCeEEEEEEECCCCcEEEEEEEEecCCCcc
Q 007227 565 TAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDIL 598 (612)
Q Consensus 565 ~v~n~~~L~~~~~~~~dG~v~D~f~i~k~~~~~~ 598 (612)
++ +++.|+++|+.+.+|++++++++.++.|..+
T Consensus 303 ~l-~~~~l~~~fid~~~GkvL~~~~~~~~~~~~~ 335 (394)
T PTZ00422 303 EL-NAEGMVTKFVSGNTGEVLYTHKQPLKKRKLR 335 (394)
T ss_pred EE-ecCEEEEEEEeCCCCcEEEEeeecccchhhh
Confidence 98 8899999999668999999999987766443
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.2e-31 Score=272.54 Aligned_cols=247 Identities=22% Similarity=0.369 Sum_probs=175.7
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcc----cHHH-HHHHhhhccccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI----SQWD-QFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~----~~wd-~f~~~i~~l~~~vP 361 (612)
++|+++||+|.... ..|......+.+++++ .+|||||++||++|++|.. ..|. .|.+.++.+..++|
T Consensus 1 ~~f~~~gD~g~~~~-------~~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P 72 (277)
T cd07378 1 LRFLALGDWGGGGT-------AGQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP 72 (277)
T ss_pred CeEEEEeecCCCCC-------HHHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC
Confidence 48999999997521 0122233445555554 6899999999999988742 3343 45555555556899
Q ss_pred eEEccCCCccCCCCCCC-CCCCCCCCCccccccccccccCCCCCCceEEEEEeC------CEEEEEEcCCCCC-------
Q 007227 362 YMIASGNHERDWPGTGS-FYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYG------MFRFCIADTEQDW------- 427 (612)
Q Consensus 362 ~~~~~GNHD~~~~~~~~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G------~v~Fi~LDT~~~~------- 427 (612)
+|+++||||........ .|.. .++..+|.+| +.||+|+++ +++||+|||....
T Consensus 73 ~~~v~GNHD~~~~~~~~~~~~~--------~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~ 139 (277)
T cd07378 73 WYLVLGNHDYSGNVSAQIDYTK--------RPNSPRWTMP-----AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIA 139 (277)
T ss_pred eEEecCCcccCCCchheeehhc--------cCCCCCccCc-----chheEEEeecCCCCCEEEEEEEeChhHcCcccccc
Confidence 99999999986321100 0000 0012334444 468999998 7999999998531
Q ss_pred --------CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecc
Q 007227 428 --------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGH 499 (612)
Q Consensus 428 --------~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH 499 (612)
..+.+|++||+++|++. ..+|+||++|+|+ ++.... . . .... ++.|++++++++|+++|+||
T Consensus 140 ~~~~~~~~~~~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~-~~~~~~-~--~--~~~~-~~~l~~l~~~~~v~~vl~GH 209 (277)
T cd07378 140 SPYGPPNGKLAEEQLAWLEKTLAAS---TADWKIVVGHHPI-YSSGEH-G--P--TSCL-VDRLLPLLKKYKVDAYLSGH 209 (277)
T ss_pred ccccCcchhhHHHHHHHHHHHHHhc---CCCeEEEEeCccc-eeCCCC-C--C--cHHH-HHHHHHHHHHcCCCEEEeCC
Confidence 13589999999999985 3489999999999 765432 1 1 1233 78999999999999999999
Q ss_pred cccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCC---CCCCceeeeeCCceEEEEEEecCCeEEEEE
Q 007227 500 VHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTT---LQTTWSLYRDYDHGFVKLTAFDHSNLLFEY 576 (612)
Q Consensus 500 ~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~---~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~ 576 (612)
+|.+++..+. ..++.||++|+||........ ..++|..++...+||.+|++ ++++|+++|
T Consensus 210 ~H~~~~~~~~----------------~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v-~~~~l~~~~ 272 (277)
T cd07378 210 DHNLQHIKDD----------------GSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLEL-TKEELTVRF 272 (277)
T ss_pred cccceeeecC----------------CCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEE-ecCEEEEEE
Confidence 9999988531 248899999998876543321 23468888889999999999 678999999
Q ss_pred EECCCC
Q 007227 577 KKSRDG 582 (612)
Q Consensus 577 ~~~~dG 582 (612)
+ +.||
T Consensus 273 ~-~~~g 277 (277)
T cd07378 273 Y-DADG 277 (277)
T ss_pred E-CCCC
Confidence 8 6665
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=237.80 Aligned_cols=239 Identities=16% Similarity=0.168 Sum_probs=161.8
Q ss_pred ceEEEEEecCCCCCCCCCCcc--cccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcc----cHHHHHHHhhhc
Q 007227 286 LQQVIIFGDMGKDEADGSNEY--NNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYI----SQWDQFTAQIEP 355 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~--~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~----~~wd~f~~~i~~ 355 (612)
+++|++++|+|.+...+...+ ..+ ......++++++. .++||||+++||+++..... .+|+.|.+.++.
T Consensus 4 ~~~f~~~sD~h~~~~~~~~~~~~~~~-~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (262)
T cd07395 4 PFYFIQGADPQLGLIKKNLEGGGDEW-DEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL 82 (262)
T ss_pred CEEEEEecCCccchhhccccCchhhh-hhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh
Confidence 599999999999854322111 011 1122334444433 24899999999999654332 356667777776
Q ss_pred cccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCC------CC
Q 007227 356 IASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW------RE 429 (612)
Q Consensus 356 l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~------~~ 429 (612)
+...+|+++++||||....... ....+|. ...++.||+|++|+++||+|||.... ..
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~~--------------~~~~~f~---~~~g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~ 145 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPTE--------------ESIKDYR---DVFGDDYFSFWVGGVFFIVLNSQLFFDPSEVPEL 145 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCCh--------------hHHHHHH---HHhCCcceEEEECCEEEEEeccccccCccccccc
Confidence 6668999999999998532110 0011221 01124589999999999999997532 13
Q ss_pred CHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCC--ccchhhHHHHHHHHHhCCCeEEEecccccceeee
Q 007227 430 GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGS--FAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 430 g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~--~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~ 507 (612)
..+|++||+++|++..+.+.+++||++|+|+ +..... ..+.. ..... ++.|.++|++++|+++|+||+|.+++..
T Consensus 146 ~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~-~~~~~~~~~~~~-~~~l~~ll~~~~V~~v~~GH~H~~~~~~ 222 (262)
T cd07395 146 AQAQDVWLEEQLEIAKESDCKHVIVFQHIPW-FLEDPD-EEDSYFNIPKSV-RKPLLDKFKKAGVKAVFSGHYHRNAGGR 222 (262)
T ss_pred hHHHHHHHHHHHHHHHhccCCcEEEEECcCC-ccCCCC-CCcccCCcCHHH-HHHHHHHHHhcCceEEEECccccCCceE
Confidence 4799999999999875446779999999999 643321 11111 11223 7899999999999999999999987642
Q ss_pred cccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEE
Q 007227 508 PIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 508 p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~ 577 (612)
.+|+.+++++++|..+. ....||..+++ +++.+++||+
T Consensus 223 ------------------~~g~~~~~~~~~~~~~~-------------~~~~g~~~~~v-~~~~~~~~~~ 260 (262)
T cd07395 223 ------------------YGGLEMVVTSAIGAQLG-------------NDKSGLRIVKV-TEDKIVHEYY 260 (262)
T ss_pred ------------------ECCEEEEEcCceecccC-------------CCCCCcEEEEE-CCCceeeeee
Confidence 14677888887776431 23589999999 6778899987
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-26 Score=222.59 Aligned_cols=259 Identities=22% Similarity=0.338 Sum_probs=166.4
Q ss_pred CCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHH-HHHHhhhccc----
Q 007227 283 QDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIA---- 357 (612)
Q Consensus 283 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~---- 357 (612)
++..++|+++||+|.... |+ |......+..|.++ -++||||.+||++|++|...+.| .|.+.++.+.
T Consensus 40 ~dgslsflvvGDwGr~g~-----~n--qs~va~qmg~ige~-l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pS 111 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGS-----FN--QSQVALQMGEIGEK-LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPS 111 (336)
T ss_pred CCCceEEEEEcccccCCc-----hh--HHHHHHHHHhHHHh-ccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcc
Confidence 456799999999995431 21 22122344445443 68999999999999999766655 3444444432
Q ss_pred cCCCeEEccCCCccCCCCCCC---CCCCCCCCCccccccccccccCCCCCCceEE--E----EEeCCEEEEEEcCCC---
Q 007227 358 STVPYMIASGNHERDWPGTGS---FYGNMDSGGECGVLVENMFYVPTENRAKFWY--S----TDYGMFRFCIADTEQ--- 425 (612)
Q Consensus 358 ~~vP~~~~~GNHD~~~~~~~~---~y~~~dsgge~g~~~~~~f~~P~~~~~~~yY--s----fd~G~v~Fi~LDT~~--- 425 (612)
-+.||+.+.||||+..+-... .|. ....||..|.. || + +..-++.++++|+-.
T Consensus 112 LQkpWy~vlGNHDyrGnV~AQls~~l~----------~~d~RW~c~rs-----f~~~ae~ve~f~v~~~~f~~d~~~~~~ 176 (336)
T KOG2679|consen 112 LQKPWYSVLGNHDYRGNVEAQLSPVLR----------KIDKRWICPRS-----FYVDAEIVEMFFVDTTPFMDDTFTLCT 176 (336)
T ss_pred cccchhhhccCccccCchhhhhhHHHH----------hhccceecccH-----Hhhcceeeeeeccccccchhhheeccc
Confidence 357999999999997532210 011 01234444421 11 0 011123334433321
Q ss_pred ----CCC-------CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeE
Q 007227 426 ----DWR-------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDI 494 (612)
Q Consensus 426 ----~~~-------~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdl 494 (612)
+|+ ....|+.||+..|++ +.++|+||++|+|+ .+.+. |+ .. ..+ +++|.|||++++||+
T Consensus 177 ~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i-~S~~~-HG---~T-~eL-~~~LlPiL~~n~Vdl 246 (336)
T KOG2679|consen 177 DDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPI-KSAGH-HG---PT-KEL-EKQLLPILEANGVDL 246 (336)
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccce-ehhhc-cC---Ch-HHH-HHHHHHHHHhcCCcE
Confidence 121 125788999999998 68899999999998 66542 33 22 234 899999999999999
Q ss_pred EEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCce----eeeeCCceEEEEEEecCC
Q 007227 495 AVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWS----LYRDYDHGFVKLTAFDHS 570 (612)
Q Consensus 495 vlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws----~~~~~~~Gy~~l~v~n~~ 570 (612)
+++||+|..|..- .++.++.+++.+||++...-...+|.|. .|.-..-||..+++ .+.
T Consensus 247 Y~nGHDHcLQhis-----------------~~e~~iqf~tSGagSkaw~g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~ 308 (336)
T KOG2679|consen 247 YINGHDHCLQHIS-----------------SPESGIQFVTSGAGSKAWRGTDHNPEVNPKELKFYYDGQGFMSVEI-SHS 308 (336)
T ss_pred EEecchhhhhhcc-----------------CCCCCeeEEeeCCcccccCCCccCCccChhheEEeeCCCceEEEEE-ecc
Confidence 9999999998773 2234444444455555322222334443 44445569999998 788
Q ss_pred eEEEEEEECCCCcEEEEEEEEec
Q 007227 571 NLLFEYKKSRDGKVYDSFRISRD 593 (612)
Q Consensus 571 ~L~~~~~~~~dG~v~D~f~i~k~ 593 (612)
.+++.|+ +..|+++.+....|+
T Consensus 309 e~~vvfy-D~~G~~Lhk~~t~kr 330 (336)
T KOG2679|consen 309 EARVVFY-DVSGKVLHKWSTSKR 330 (336)
T ss_pred eeEEEEE-eccCceEEEeecccc
Confidence 9999998 899999998775554
|
|
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.90 E-value=4.5e-22 Score=219.38 Aligned_cols=310 Identities=17% Similarity=0.273 Sum_probs=149.2
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHH
Q 007227 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNT 316 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~ 316 (612)
..+.+++.++||+|+|+|+||+... +....|..++|||+|... ...+||++++|.+... +....
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~---~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~------------~~~~~ 123 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVD---GGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYED------------GYFPA 123 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE-----TTEE---EEEE--TT------EEEEEE----CCC---------------HH
T ss_pred CCeEeecccCCCCCCceEEEEEEEe---cCCCCCCceEEEcCCCCC-CCceEEEEECCCCccc------------ChHHH
Confidence 4689999999999999999999984 123447899999996543 3359999999997532 12456
Q ss_pred HHHHHHhcCCCCEEEEcCccccCCCc-----------------------c----cHHHHHH--HhhhccccCCCeEEccC
Q 007227 317 TRQLIQDLKNIDIVFHIGDICYANGY-----------------------I----SQWDQFT--AQIEPIASTVPYMIASG 367 (612)
Q Consensus 317 ~~~l~~~~~~pdfvl~~GDi~Y~~g~-----------------------~----~~wd~f~--~~i~~l~~~vP~~~~~G 367 (612)
+..++++ .+|||+||+||.+|+++. . ..|..+. ..++.+.+.+|+++++.
T Consensus 124 ~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwD 202 (453)
T PF09423_consen 124 YRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWD 202 (453)
T ss_dssp HHHHTT--S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---
T ss_pred HHhhhcc-CCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEcc
Confidence 7777764 589999999999998742 0 1122221 34566778899999999
Q ss_pred CCccCCCCCCCCCCCCCCCCccc-------ccccccc-ccCCC------CCCceEEEEEeCC-EEEEEEcCCCCCC----
Q 007227 368 NHERDWPGTGSFYGNMDSGGECG-------VLVENMF-YVPTE------NRAKFWYSTDYGM-FRFCIADTEQDWR---- 428 (612)
Q Consensus 368 NHD~~~~~~~~~y~~~dsgge~g-------~~~~~~f-~~P~~------~~~~~yYsfd~G~-v~Fi~LDT~~~~~---- 428 (612)
+||+..+..+. ...... ...+ ..++..+ .+|.. .....|++|++|+ +.|++||++....
T Consensus 203 DHdi~nn~~~~-~~~~~~-~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~ 280 (453)
T PF09423_consen 203 DHDIGNNWWGD-GAENHQ-DTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPC 280 (453)
T ss_dssp STTTSTT-BTT-B-STT----HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CC
T ss_pred CceecccccCC-cccccc-ccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccc
Confidence 99996332100 000000 0000 0111111 23322 1356799999999 9999999985321
Q ss_pred -----------------CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCc-------cCCCCccchhhHHHHH
Q 007227 429 -----------------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSY-------AVEGSFAEPMGRESLQ 484 (612)
Q Consensus 429 -----------------~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~-------~~~~~~~~~~~r~~l~ 484 (612)
.|.+|++||++.|++ +.++|+|++.-.|+ ....... ..+..-.-+..|++|.
T Consensus 281 ~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~-~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll 356 (453)
T PF09423_consen 281 DGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPF-SPLNFPDAAEGLPFNMDSWDGYPAERQRLL 356 (453)
T ss_dssp CSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS---S---SS-SS-S--EETTSGGGSHHHHHHHH
T ss_pred cccccccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCce-ecccccccccccccCCCchhhCHHHHHHHH
Confidence 368999999999998 56899999988876 3221110 1111100112289999
Q ss_pred HHHHhCCCe--EEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECC---CCCCCCCCC------CCCCCcee
Q 007227 485 KLWQKYKVD--IAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGG---AGASLSPFT------TLQTTWSL 553 (612)
Q Consensus 485 ~ll~k~~Vd--lvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~---gG~~l~~~~------~~~~~ws~ 553 (612)
.+|.+.++. ++|+|++|...-..--.+..-.. . ......+-+++++ +|..+.... ....++-.
T Consensus 357 ~~l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~----~--~~~~~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~ 430 (453)
T PF09423_consen 357 DFLRESGIRNVVFLSGDVHASAASRIPPDDADPP----D--GPGSVGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLK 430 (453)
T ss_dssp HHHHHTT---EEEEE-SSSSEEEEEEESSTT-------T--TS-EEEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEE
T ss_pred HHHHhhCCCCEEEEecCcchheeeeccccccccc----C--CCCCeEEEEECCCccCCCcccccchhhhhhhhhcCCceE
Confidence 999988876 88999999976554222110000 0 0001123344443 122100000 01123444
Q ss_pred ee-eCCceEEEEEEecCCeEEEEE
Q 007227 554 YR-DYDHGFVKLTAFDHSNLLFEY 576 (612)
Q Consensus 554 ~~-~~~~Gy~~l~v~n~~~L~~~~ 576 (612)
|. ...+||+.|++ +.+.++.+|
T Consensus 431 ~~~~~~~G~~~i~~-~~~~~~~~~ 453 (453)
T PF09423_consen 431 FADLRNFGYVEIDI-TPERVTAEW 453 (453)
T ss_dssp EEE-B-EEEEEEEE-ETTEEEEEE
T ss_pred EeECCCCcEEEEEE-ccceEEEEC
Confidence 43 36899999999 788998875
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=204.91 Aligned_cols=228 Identities=14% Similarity=0.214 Sum_probs=150.5
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
||++++|+|.+.......+ .......++++++. ..+||+|+++||+++. +...+|+.+.+.++.+ .+|++
T Consensus 1 r~~~iSDlH~~~~~~~~~~---~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~ 74 (240)
T cd07402 1 LLAQISDLHLRADGEGALL---GVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVY 74 (240)
T ss_pred CEEEEeCCccCCCCcceec---CcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEE
Confidence 6999999998754211000 01122334444443 2489999999999954 4455677777777765 78999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCC----CCCHHHHHHHHH
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW----REGTEQYRFIEH 439 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~----~~g~~Q~~WL~~ 439 (612)
.++||||.... + ...|..........+|+|+.++++||+||+.... ....+|++||++
T Consensus 75 ~v~GNHD~~~~-----~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~ 136 (240)
T cd07402 75 LLPGNHDDRAA-----M-------------RAVFPELPPAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEA 136 (240)
T ss_pred EeCCCCCCHHH-----H-------------HHhhccccccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHH
Confidence 99999997411 0 0111000001235678999999999999987532 235789999999
Q ss_pred HHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhC-CCeEEEecccccceeeecccCceeccCC
Q 007227 440 CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERICPIYQNICTNKE 518 (612)
Q Consensus 440 ~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~ 518 (612)
.|++.. ..++|+++|+|+ +......... .... .++.+.+++.++ +|+++|+||.|......
T Consensus 137 ~L~~~~---~~~~il~~H~pp-~~~~~~~~~~--~~~~-~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~----------- 198 (240)
T cd07402 137 ALAEAP---DKPTLVFLHHPP-FPVGIAWMDA--IGLR-NAEALAAVLARHPNVRAILCGHVHRPIDGS----------- 198 (240)
T ss_pred HHHhCC---CCCEEEEECCCC-ccCCchhhhh--hhCC-CHHHHHHHHhcCCCeeEEEECCcCchHHeE-----------
Confidence 999852 456888899988 5542211111 1111 267999999999 99999999999975442
Q ss_pred CccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEec
Q 007227 519 KHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFD 568 (612)
Q Consensus 519 ~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n 568 (612)
.+|+.++++|+.|..... .++-..+....+||..+.+++
T Consensus 199 -------~~g~~~~~~gs~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 237 (240)
T cd07402 199 -------WGGIPLLTAPSTCHQFAP----DLDDFALDALAPGYRALSLHE 237 (240)
T ss_pred -------ECCEEEEEcCcceeeecC----CCCcccccccCCCCcEEEEec
Confidence 257888899988776422 223333345678999888754
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-21 Score=201.89 Aligned_cols=205 Identities=20% Similarity=0.264 Sum_probs=135.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcc---cHHHHHHHhhhccccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYI---SQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~---~~wd~f~~~i~~l~~~vP 361 (612)
|||++++|+|....+.... .+...+...+++++++. .+||+|+++||+++. +.. .+|+.+.+.++.+ .+|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~--~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~-~~~~~~~~~~~~~~~l~~l--~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRP--RYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDG-DNARAEEALDAVLAILDRL--KGP 75 (267)
T ss_pred CeEEEEeccccccCCCccc--chHHHhHHHHHHHHHHHHcCCCCEEEECCCeecC-CCchHHHHHHHHHHHHHhc--CCC
Confidence 6999999999654321100 01112334455555442 469999999999953 333 4555555555544 589
Q ss_pred eEEccCCCccCCCCCCCCCCCCCCCCccccccccccc-cCCCCCCceEEEEEeCCEEEEEEcCCCC--------------
Q 007227 362 YMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFY-VPTENRAKFWYSTDYGMFRFCIADTEQD-------------- 426 (612)
Q Consensus 362 ~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~-~P~~~~~~~yYsfd~G~v~Fi~LDT~~~-------------- 426 (612)
+++++||||....... .+. +.....+..||+|++++++||+||+...
T Consensus 76 ~~~v~GNHD~~~~~~~------------------~~~~~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~ 137 (267)
T cd07396 76 VHHVLGNHDLYNPSRE------------------YLLLYTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAEN 137 (267)
T ss_pred EEEecCccccccccHh------------------hhhcccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhh
Confidence 9999999998632110 000 1112235569999999999999998531
Q ss_pred --------------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHH
Q 007227 427 --------------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKL 486 (612)
Q Consensus 427 --------------------~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l 486 (612)
...+.+|++||+++|++... +..++||++|+|+ +.... ...... .. ++.+.++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~-~~~~~--~~~~~~--~~-~~~~~~l 210 (267)
T cd07396 138 ADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPL-HPEST--SPHGLL--WN-HEEVLSI 210 (267)
T ss_pred HHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccC-CCCCC--Cccccc--cC-HHHHHHH
Confidence 12358999999999998642 3356899999998 65432 111111 11 6789999
Q ss_pred HHhC-CCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCC
Q 007227 487 WQKY-KVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGA 539 (612)
Q Consensus 487 l~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~ 539 (612)
+.++ +|+++|+||+|.++... .+|+.|+++|+-..
T Consensus 211 l~~~~~V~~v~~GH~H~~~~~~------------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 211 LRAYGCVKACISGHDHEGGYAQ------------------RHGIHFLTLEGMVE 246 (267)
T ss_pred HHhCCCEEEEEcCCcCCCCccc------------------cCCeeEEEechhhc
Confidence 9995 89999999999987442 25788888887544
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-21 Score=203.78 Aligned_cols=299 Identities=20% Similarity=0.291 Sum_probs=193.4
Q ss_pred CcceeeecCCCCcEEEEEEeCCCCC-----CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 170 VYPRLAQGKVWNEMTVTWTSGYGIN-----EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 170 ~~~~La~~~~~~~m~V~W~T~~~~~-----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.+.-++.|+-...-.|.|+.-.+.. +....+||++++.....+..++.. .+ .+..+.+++.
T Consensus 39 F~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~-----------a~---p~~dhtv~v~ 104 (522)
T COG3540 39 FTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVI-----------AS---PELDHTVHVD 104 (522)
T ss_pred cccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCcc-----------CC---cccCceEEEe
Confidence 3344555655566677787644211 344567777766543322222111 11 1245889999
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL 324 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~ 324 (612)
++||+|++.|+||+... ..-|.+.+|||+|.++.. ++|+.+||..... |+.+-..+.+.|.+
T Consensus 105 ~~gL~P~~~yfYRf~~~-----~~~spvGrtrTapa~~~~--i~~~~fa~ascQ~---------~~~gy~~aY~~ma~-- 166 (522)
T COG3540 105 LRGLSPDQDYFYRFKAG-----DERSPVGRTRTAPAPGRA--IRFVWFADASCQG---------WEIGYMTAYKTMAK-- 166 (522)
T ss_pred ccCCCCCceEEEEEeeC-----CccccccccccCCCCCCc--chhhhhhhccccc---------cccchhHHHHHHHh--
Confidence 99999999999999875 234789999999998665 7788888875432 33445677788877
Q ss_pred CCCCEEEEcCccccCCCcc-----------------------------cHHHHHH--HhhhccccCCCeEEccCCCccCC
Q 007227 325 KNIDIVFHIGDICYANGYI-----------------------------SQWDQFT--AQIEPIASTVPYMIASGNHERDW 373 (612)
Q Consensus 325 ~~pdfvl~~GDi~Y~~g~~-----------------------------~~wd~f~--~~i~~l~~~vP~~~~~GNHD~~~ 373 (612)
.+|||+||.||.+|+.|-. .+|.++. +.++...+..|+++.+.+||...
T Consensus 167 ~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~N 246 (522)
T COG3540 167 EEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVAN 246 (522)
T ss_pred cCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccc
Confidence 5799999999999986521 1222221 23556668899999999999974
Q ss_pred CCCCCCCCCCCC-CCccc------ccccccc-ccCCCC-----CCceEEEEEeCC-EEEEEEcCCCCCC-----------
Q 007227 374 PGTGSFYGNMDS-GGECG------VLVENMF-YVPTEN-----RAKFWYSTDYGM-FRFCIADTEQDWR----------- 428 (612)
Q Consensus 374 ~~~~~~y~~~ds-gge~g------~~~~~~f-~~P~~~-----~~~~yYsfd~G~-v~Fi~LDT~~~~~----------- 428 (612)
+-... -...|+ -.|.. ..++.++ .||-.. ....|.+|.||+ ..|.+||++.+..
T Consensus 247 N~~~~-~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~ 325 (522)
T COG3540 247 NWSNS-IDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPN 325 (522)
T ss_pred ccccc-ccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcch
Confidence 32110 000021 11110 1112222 466321 257899999999 6899999986431
Q ss_pred -----------CCHHHHHHHHHHHhhccCCCCCeEEEEEcccccc---CCC-----CCccCCCCccchhhHHHHHHHHHh
Q 007227 429 -----------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGY---SSD-----LSYAVEGSFAEPMGRESLQKLWQK 489 (612)
Q Consensus 429 -----------~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~y---ss~-----~~~~~~~~~~~~~~r~~l~~ll~k 489 (612)
.|.+|.+||+..|.+ +++.|+|+..-.||.- ... .....++.-...++|+.|...+++
T Consensus 326 ~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~ 402 (522)
T COG3540 326 CQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIAD 402 (522)
T ss_pred hhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHh
Confidence 268999999999998 7899999998888731 100 000111211234569999999999
Q ss_pred CCCe--EEEecccccce
Q 007227 490 YKVD--IAVFGHVHNYE 504 (612)
Q Consensus 490 ~~Vd--lvlsGH~H~Ye 504 (612)
.++. ++|+|.+|...
T Consensus 403 ~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 403 RKIRNTVVLTGDVHYSW 419 (522)
T ss_pred cCCCCcEEEechhHHHH
Confidence 8876 89999999743
|
|
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.7e-20 Score=188.74 Aligned_cols=247 Identities=15% Similarity=0.210 Sum_probs=147.3
Q ss_pred EEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcccHHHHHH
Q 007227 275 FKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFT 350 (612)
Q Consensus 275 F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~~~wd~f~ 350 (612)
.++.++. ...+||+.++|+|...... .... .......+++++++ ..+|||||++||++. ++...+|+.+.
T Consensus 5 ~~~~~~~--~~~~~i~~iSD~Hl~~~~~-~~~~--~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~-~~~~~~~~~~~ 78 (275)
T PRK11148 5 LTLPLAG--EARVRILQITDTHLFADEH-ETLL--GVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ-DHSSEAYQHFA 78 (275)
T ss_pred cccccCC--CCCEEEEEEcCcccCCCCC-Ccee--ccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC-CCCHHHHHHHH
Confidence 3455543 2459999999999743211 1110 01123344444433 247999999999994 45556677777
Q ss_pred HhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCC---
Q 007227 351 AQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW--- 427 (612)
Q Consensus 351 ~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~--- 427 (612)
+.++.+ .+|+++++||||.... +. ..+ +.......++.+..++++||+|||....
T Consensus 79 ~~l~~l--~~Pv~~v~GNHD~~~~----~~--------------~~~--~~~~~~~~~~~~~~~~~~~i~Lds~~~g~~~ 136 (275)
T PRK11148 79 EGIAPL--RKPCVWLPGNHDFQPA----MY--------------SAL--QDAGISPAKHVLIGEHWQILLLDSQVFGVPH 136 (275)
T ss_pred HHHhhc--CCcEEEeCCCCCChHH----HH--------------HHH--hhcCCCccceEEecCCEEEEEecCCCCCCcC
Confidence 777665 5899999999997421 00 011 0000111223344556999999997532
Q ss_pred -CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhC-CCeEEEeccccccee
Q 007227 428 -REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYER 505 (612)
Q Consensus 428 -~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeR 505 (612)
..+.+|++||+++|++. .+.+-+|+++|+|+ .....|.... .. .. .++|.++++++ +|+++|+||+|....
T Consensus 137 G~l~~~ql~wL~~~L~~~--~~~~~vv~~hH~P~-~~~~~~~d~~-~l--~n-~~~l~~ll~~~~~v~~vl~GH~H~~~~ 209 (275)
T PRK11148 137 GELSEYQLEWLERKLADA--PERHTLVLLHHHPL-PAGCAWLDQH-SL--RN-AHELAEVLAKFPNVKAILCGHIHQELD 209 (275)
T ss_pred CEeCHHHHHHHHHHHhhC--CCCCeEEEEcCCCC-CCCcchhhcc-CC--CC-HHHHHHHHhcCCCceEEEecccChHHh
Confidence 23589999999999985 23333455555665 3322221111 11 11 57899999998 899999999998543
Q ss_pred eecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEE
Q 007227 506 ICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 506 t~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~ 578 (612)
. ..+|+.++++++.+..... ..... .+.....||..+++.++..+..+.++
T Consensus 210 ~------------------~~~gi~~~~~ps~~~q~~~---~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~ 260 (275)
T PRK11148 210 L------------------DWNGRRLLATPSTCVQFKP---HCTNF-TLDTVAPGWRELELHADGSLETEVHR 260 (275)
T ss_pred c------------------eECCEEEEEcCCCcCCcCC---CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEE
Confidence 2 1257777777776654311 11111 12234578888888545566666554
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-19 Score=183.72 Aligned_cols=195 Identities=15% Similarity=0.212 Sum_probs=121.8
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCC--------cccHHHHHHHhhhccc--c
Q 007227 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANG--------YISQWDQFTAQIEPIA--S 358 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g--------~~~~wd~f~~~i~~l~--~ 358 (612)
|+.++|+|.+..... . .....+.+...+++ .+||+|+++||++.... ...+|+.|++.+.... .
T Consensus 2 ~~~iSDlH~g~~~~~-~----~~~~~~~~~~~i~~-~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPP-N----RAQDETFCSNFIDV-IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCch-h----hhhHHHHHHHHHHh-hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCC
Confidence 789999998753210 0 00000122333333 58999999999995321 2457888888765533 2
Q ss_pred CCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCC----------CC
Q 007227 359 TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD----------WR 428 (612)
Q Consensus 359 ~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~----------~~ 428 (612)
..|++.++||||...... . ++ +. ..+.+...........++++++.|+++||+|||... ..
T Consensus 76 ~~p~~~v~GNHD~~~~~~---~---~~--~~-~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~ 146 (256)
T cd07401 76 KEKWFDIRGNHDLFNIPS---L---DS--EN-NYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGS 146 (256)
T ss_pred cceEEEeCCCCCcCCCCC---c---cc--hh-hHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceecc
Confidence 689999999999842110 0 00 00 111111111111111222334459999999999742 12
Q ss_pred CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeec
Q 007227 429 EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICP 508 (612)
Q Consensus 429 ~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p 508 (612)
...+|++||+++|++. .+.+++||++|+|+ +..... . ....+ .+.++|++++|+++|+||.|.+++..|
T Consensus 147 l~~~ql~wL~~~L~~~--~~~~~~IV~~HhP~-~~~~~~---~----~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 147 LDKKLLDRLEKELEKS--TNSNYTIWFGHYPT-STIISP---S----AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred CCHHHHHHHHHHHHhc--ccCCeEEEEEcccc-hhccCC---C----cchhH-HHHHHHHhcCCcEEEeCCccCCCccee
Confidence 3589999999999975 34578999999998 542111 1 01113 399999999999999999999999666
Q ss_pred c
Q 007227 509 I 509 (612)
Q Consensus 509 ~ 509 (612)
+
T Consensus 216 ~ 216 (256)
T cd07401 216 V 216 (256)
T ss_pred e
Confidence 6
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.2e-19 Score=174.11 Aligned_cols=159 Identities=19% Similarity=0.249 Sum_probs=112.0
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCh-HHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccc-cCCCe
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGS-LNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA-STVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s-~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~-~~vP~ 362 (612)
|||++++|+|..... .+.. ...++++++.. .+||+|+++||+++......+|+.+.+.++.+. ..+|+
T Consensus 1 f~~~~~~D~q~~~~~--------~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~ 72 (214)
T cd07399 1 FTLAVLPDTQYYTES--------YPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPY 72 (214)
T ss_pred CEEEEecCCCcCCcC--------CHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcE
Confidence 689999999975421 1111 23445555542 579999999999965443678999888888876 67999
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHh
Q 007227 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLA 442 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~ 442 (612)
++++||||.- +.+|+. ...+|++||++.|+
T Consensus 73 ~~~~GNHD~~----------------------------------------------~~ld~~----~~~~ql~WL~~~L~ 102 (214)
T cd07399 73 SVLAGNHDLV----------------------------------------------LALEFG----PRDEVLQWANEVLK 102 (214)
T ss_pred EEECCCCcch----------------------------------------------hhCCCC----CCHHHHHHHHHHHH
Confidence 9999999941 112221 24799999999999
Q ss_pred hccCCCCCeEEEEEccccccCCCCCccCCC-CccchhhHHHHHHHHHhC-CCeEEEecccccceeee
Q 007227 443 SVDRQKQPWLIFLAHRVLGYSSDLSYAVEG-SFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERIC 507 (612)
Q Consensus 443 ~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~-~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt~ 507 (612)
+. +..++|++.|+|+ +....+..... ......+++.|++|++++ +|+++|+||+|.+.+..
T Consensus 103 ~~---~~~~~iv~~H~p~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 103 KH---PDRPAILTTHAYL-NCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred HC---CCCCEEEEecccc-cCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 74 3456899999998 65543221110 000112356899999998 79999999999998875
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.9e-15 Score=157.61 Aligned_cols=181 Identities=15% Similarity=0.176 Sum_probs=115.7
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCccc--------HHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCC
Q 007227 315 NTTRQLIQDLKNIDIVFHIGDICYANGYIS--------QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSG 386 (612)
Q Consensus 315 ~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~--------~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsg 386 (612)
.+++.+.+...+|||||++||++..+.... .+..+++.++.....+|+++++||||....+. +......
T Consensus 57 s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~---~~~~~~~ 133 (296)
T cd00842 57 SALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQ---FPPNNSP 133 (296)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccc---cCCcccc
Confidence 345555554468999999999996543211 24556666777778899999999999863221 1000000
Q ss_pred Cccccccccccc--cCCC----CCCceEEEEE-eCCEEEEEEcCCCCC-----------CCCHHHHHHHHHHHhhccCCC
Q 007227 387 GECGVLVENMFY--VPTE----NRAKFWYSTD-YGMFRFCIADTEQDW-----------REGTEQYRFIEHCLASVDRQK 448 (612)
Q Consensus 387 ge~g~~~~~~f~--~P~~----~~~~~yYsfd-~G~v~Fi~LDT~~~~-----------~~g~~Q~~WL~~~L~~~~r~~ 448 (612)
...-......|. +|.. -....||+++ .++++||+|||.... ....+|++||+++|+++.. +
T Consensus 134 ~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~-~ 212 (296)
T cd00842 134 SWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQ-A 212 (296)
T ss_pred cHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHH-C
Confidence 000000011111 2211 1245689988 889999999997532 1247899999999998743 3
Q ss_pred CCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCC--CeEEEecccccceeee
Q 007227 449 QPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK--VDIAVFGHVHNYERIC 507 (612)
Q Consensus 449 ~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~--VdlvlsGH~H~YeRt~ 507 (612)
...++|++|+|+ +..... . . ...++.|.+|+++|+ |.++|+||+|..+...
T Consensus 213 ~~~v~I~~HiPp-~~~~~~----~-~--~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~ 265 (296)
T cd00842 213 GEKVWIIGHIPP-GVNSYD----T-L--ENWSERYLQIINRYSDTIAGQFFGHTHRDEFRV 265 (296)
T ss_pred CCeEEEEeccCC-CCcccc----c-c--hHHHHHHHHHHHHHHHhhheeeecccccceEEE
Confidence 345788899998 443210 0 0 122789999999997 7889999999977663
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.5e-16 Score=145.45 Aligned_cols=195 Identities=19% Similarity=0.230 Sum_probs=99.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHH-HhhhccccCCCeEEc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT-AQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~-~~i~~l~~~vP~~~~ 365 (612)
+||+++||+|...... .. ....+..... ..++|+||++||+++.......+.... .........+|++++
T Consensus 1 ~ri~~isD~H~~~~~~-------~~-~~~~~~~~~~-~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (200)
T PF00149_consen 1 MRILVISDLHGGYDDD-------SD-AFRKLDEIAA-ENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFI 71 (200)
T ss_dssp EEEEEEEBBTTTHHHH-------CH-HHHHHHHHHH-HTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred CeEEEEcCCCCCCcch-------hH-HHHHHHHHhc-cCCCCEEEeeccccccccccccchhhhccchhhhhcccccccc
Confidence 6999999999864210 00 1122233332 378999999999997666544433322 223344568999999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccccccc-cCCC---CCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHH
Q 007227 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFY-VPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCL 441 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~-~P~~---~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L 441 (612)
+||||+...... + .......... .... ...+...........+..............+..|+...+
T Consensus 72 ~GNHD~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (200)
T PF00149_consen 72 LGNHDYYSGNSF--Y--------GFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLL 141 (200)
T ss_dssp E-TTSSHHHHHH--H--------HHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHH
T ss_pred ccccccceeccc--c--------ccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccc
Confidence 999998631100 0 0000000000 0000 000000112222222222222211111223333333322
Q ss_pred hhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccc
Q 007227 442 ASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 442 ~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
....+...+++||++|+|+ ++........ ......++.+..++.+++|+++|+||+|.|
T Consensus 142 ~~~~~~~~~~~iv~~H~p~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 142 LLLEAKNDDPVIVFTHHPP-YSSSSDSSSY--GNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHEEEESEEEEEESSSS-STTSSSTHHH--SSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred cccccccccceeEEEecCC-CCcccccccc--chhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 2222356789999999999 6553321110 001123789999999999999999999987
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.3e-15 Score=153.47 Aligned_cols=161 Identities=20% Similarity=0.196 Sum_probs=103.1
Q ss_pred CCCCEEEEcCccccCCCcc---cHHH----HHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccccccc
Q 007227 325 KNIDIVFHIGDICYANGYI---SQWD----QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMF 397 (612)
Q Consensus 325 ~~pdfvl~~GDi~Y~~g~~---~~wd----~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f 397 (612)
.+||+||++||++. .|.. .+|. .|.+.+.++...+|++.++||||+.+.+... . ..-..|+..|
T Consensus 44 l~PD~vv~lGDL~d-~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~-------~~~~rf~~~F 114 (257)
T cd08163 44 LKPDSTIFLGDLFD-GGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-L-------PVRQRFEKYF 114 (257)
T ss_pred cCCCEEEEeccccc-CCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-H-------HHHHHHHHHh
Confidence 57999999999995 4532 3454 3344444433458999999999986421100 0 0001122233
Q ss_pred ccCCCCCCceEEEEEeCCEEEEEEcCCCCC-----CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCC
Q 007227 398 YVPTENRAKFWYSTDYGMFRFCIADTEQDW-----REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEG 472 (612)
Q Consensus 398 ~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~-----~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~ 472 (612)
. ...|+|++|+++||+|||.... ....+|.+||++.|+.. .....+|++.|+|+ |....- .+|
T Consensus 115 g-------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~--~~~~p~ILl~H~Pl-yr~~~~--~cg 182 (257)
T cd08163 115 G-------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMK--VKSKPRILLTHVPL-YRPPNT--SCG 182 (257)
T ss_pred C-------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhcc--CCCCcEEEEecccc-ccCCCC--CCC
Confidence 1 2357899999999999997421 23468999999999864 23345899999999 654221 111
Q ss_pred Ccc--------------c-hhhHHHHHHHHHhCCCeEEEecccccceee
Q 007227 473 SFA--------------E-PMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 473 ~~~--------------~-~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
... + -+..+.-..||++.++.+||+||+|.|=..
T Consensus 183 ~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 183 PLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred CccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 000 0 111355567888889999999999998554
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.9e-15 Score=146.29 Aligned_cols=166 Identities=15% Similarity=0.171 Sum_probs=101.6
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCccc-HHHHHHHhhhccc-cCCCeE
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYIS-QWDQFTAQIEPIA-STVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~-~wd~f~~~i~~l~-~~vP~~ 363 (612)
.+||++++|+|.+..................+++++++ .+||+|+++||+++...... .+..+.+.++++. ..+|++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 48999999999876431100000111223445555554 68999999999997655432 2344444444443 369999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhh
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~ 443 (612)
+++||||.. ......|++||+++|++
T Consensus 81 ~~~GNHD~~------------------------------------------------------g~l~~~ql~wL~~~l~~ 106 (199)
T cd07383 81 ATFGNHDGY------------------------------------------------------DWIRPSQIEWFKETSAA 106 (199)
T ss_pred EECccCCCC------------------------------------------------------CCCCHHHHHHHHHHHHH
Confidence 999999921 01235899999999998
Q ss_pred cc--CCCCCeEEEEEccccccCCCC-Cc------cC--CCCccchhhHHHHHHHHHhCCCeEEEecccccceeee
Q 007227 444 VD--RQKQPWLIFLAHRVLGYSSDL-SY------AV--EGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 444 ~~--r~~~~w~Iv~~H~P~~yss~~-~~------~~--~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~ 507 (612)
.. +....+.+++.|+|+ ..... |. +. +...........+..+.+..+|+++|+||+|.++...
T Consensus 107 ~~~~~~~~~~~l~f~H~P~-~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 107 LKKKYGKPIPSLAFFHIPL-PEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred HhhccCCCCcceEEEecCh-HHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 63 234467899999987 43211 11 00 1000001112334444566799999999999987664
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.8e-15 Score=147.37 Aligned_cols=201 Identities=18% Similarity=0.227 Sum_probs=118.6
Q ss_pred EEEEecCCCCCC--CCCCcccccccChHHHHHHHHH---h-cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCe
Q 007227 289 VIIFGDMGKDEA--DGSNEYNNFQRGSLNTTRQLIQ---D-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 289 f~v~GD~g~~~~--~~~~~~~~~~~~s~~~~~~l~~---~-~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (612)
+.+++|+|.... .+.+.+ .....+.++++.+ . ..+||+|+++||+++ .+........++.++.+ ..|+
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~---g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~-~~~~~~~~~~l~~l~~l--~~~v 74 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVF---GPEWKNHTEKIKENWDNVVAPEDIVLIPGDISW-AMKLEEAKLDLAWIDAL--PGTK 74 (232)
T ss_pred CeEEEeeccCCCCCCCCccc---CccHHHHHHHHHHHHHhcCCCCCEEEEcCCCcc-CCChHHHHHHHHHHHhC--CCCe
Confidence 368899997642 111122 2222333444333 2 248999999999994 33323333334444433 3478
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCC-CceEEEEEeCCEEEEEEcCCC----CC----------
Q 007227 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR-AKFWYSTDYGMFRFCIADTEQ----DW---------- 427 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~-~~~yYsfd~G~v~Fi~LDT~~----~~---------- 427 (612)
++++||||+....... +... ++.... -..-.++.++++.|+.++... .+
T Consensus 75 ~~V~GNHD~~~~~~~~--------------~~~~--l~~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~ 138 (232)
T cd07393 75 VLLKGNHDYWWGSASK--------------LRKA--LEESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVE 138 (232)
T ss_pred EEEeCCccccCCCHHH--------------HHHH--HHhcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccch
Confidence 9999999973211000 0000 110000 000134567889999876311 11
Q ss_pred C---CCHHHHHHHHHHHhhccCC-CCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccc
Q 007227 428 R---EGTEQYRFIEHCLASVDRQ-KQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 428 ~---~g~~Q~~WL~~~L~~~~r~-~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
. ...+|++||++.|++.... ...++|++.|+|+ +.... ..+.+..++++++|+++|+||+|.+
T Consensus 139 ~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~-~~~~~------------~~~~~~~~~~~~~v~~vl~GH~H~~ 205 (232)
T cd07393 139 EDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPP-ANENG------------DDSPISKLIEEYGVDICVYGHLHGV 205 (232)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC-cCCCC------------CHHHHHHHHHHcCCCEEEECCCCCC
Confidence 0 1256899999999976322 2357999999998 54321 0346788899999999999999999
Q ss_pred eeeecccCceeccCCCccccCCCCCeEEEEECCC
Q 007227 504 ERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGA 537 (612)
Q Consensus 504 eRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~g 537 (612)
++..|+.. ..+|+.|+++.++
T Consensus 206 ~~~~~~~~-------------~~~gi~~~~~~~~ 226 (232)
T cd07393 206 GRDRAING-------------ERGGIRYQLVSAD 226 (232)
T ss_pred cccccccc-------------eECCEEEEEEcch
Confidence 99877642 2257777776554
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-13 Score=148.46 Aligned_cols=96 Identities=21% Similarity=0.245 Sum_probs=71.9
Q ss_pred CceEEEEE-eCCEEEEEEcCCCCC-----CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccC-C--CCcc
Q 007227 405 AKFWYSTD-YGMFRFCIADTEQDW-----REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAV-E--GSFA 475 (612)
Q Consensus 405 ~~~yYsfd-~G~v~Fi~LDT~~~~-----~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~-~--~~~~ 475 (612)
+..||+|+ .++++||+|||.... ...++|++||+++|++ .+.+++||++|||+ ++....... . +..
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~---a~~k~VVVf~HHPp-~s~g~~~~Dp~~pg~~- 364 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA---SSDTLFVLFSHHTS-WSMVNELTDPVDPGEK- 364 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc---CCCCCEEEEECCCC-cccccccccccccccc-
Confidence 56799999 899999999997531 2458999999999997 34567999999998 654321110 0 000
Q ss_pred chhhHHHHHHHHHhC-CCeEEEecccccceee
Q 007227 476 EPMGRESLQKLWQKY-KVDIAVFGHVHNYERI 506 (612)
Q Consensus 476 ~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt 506 (612)
... .++|.++|++| +|.++|+||.|....+
T Consensus 365 ~~n-~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 365 RHL-GTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred ccC-HHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 111 56899999998 8999999999987655
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-14 Score=114.85 Aligned_cols=62 Identities=37% Similarity=0.737 Sum_probs=42.2
Q ss_pred CCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCcEEEEE
Q 007227 527 NGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSF 588 (612)
Q Consensus 527 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~v~D~f 588 (612)
++|||||+|+||+.++++..++|+|+++|..+|||.+|++.|+++|++||+++.||+|+|+|
T Consensus 1 kapVhiv~G~aG~~l~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLDPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T----B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCCEEEEECcCCCCcccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 48999999999999888888899999999999999999998999999999999999999998
|
|
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.4e-13 Score=128.90 Aligned_cols=168 Identities=16% Similarity=0.195 Sum_probs=101.5
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCC
Q 007227 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GN 368 (612)
++++||+|.... .+.. ..++ ..++|+|+++||+++. +.......+ +.++. ..+|+++++||
T Consensus 1 i~~~sD~H~~~~------------~~~~--~~~~-~~~~D~vv~~GDl~~~-~~~~~~~~~-~~l~~--~~~p~~~v~GN 61 (188)
T cd07392 1 ILAISDIHGDVE------------KLEA--IILK-AEEADAVIVAGDITNF-GGKEAAVEI-NLLLA--IGVPVLAVPGN 61 (188)
T ss_pred CEEEEecCCCHH------------HHHH--HHhh-ccCCCEEEECCCccCc-CCHHHHHHH-HHHHh--cCCCEEEEcCC
Confidence 578999986421 1111 2222 2689999999999954 333333333 34433 36899999999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCC------CCCCHHHHHHHHHHHh
Q 007227 369 HERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD------WREGTEQYRFIEHCLA 442 (612)
Q Consensus 369 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~------~~~g~~Q~~WL~~~L~ 442 (612)
||.... ..... ...+.+ .+ ..+.++++.|+.+++... .....+|++|+ +.|+
T Consensus 62 HD~~~~-----~~~~~---------~~~~~~-----~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~ 119 (188)
T cd07392 62 CDTPEI-----LGLLT---------SAGLNL-----HG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLN 119 (188)
T ss_pred CCCHHH-----HHhhh---------cCcEec-----CC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhh
Confidence 997421 00000 000111 01 235678899999987532 12346889998 4444
Q ss_pred hccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007227 443 SVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 443 ~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
. ...+.+|++.|+|+ +.. +....... ...+.+.+..++++++++++|+||+|.-.
T Consensus 120 ~---~~~~~~ilv~H~pp-~~~--~~d~~~~~-~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 120 N---LLAKNLILVTHAPP-YGT--AVDRVSGG-FHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred c---cCCCCeEEEECCCC-cCC--cccccCCC-CccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 3 33456899999998 653 11110000 01236789999999999999999999853
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.7e-12 Score=135.95 Aligned_cols=97 Identities=19% Similarity=0.148 Sum_probs=66.9
Q ss_pred CceEEEEE-eCCE--EEEEEcCCCCC-----------CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCC-Ccc
Q 007227 405 AKFWYSTD-YGMF--RFCIADTEQDW-----------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDL-SYA 469 (612)
Q Consensus 405 ~~~yYsfd-~G~v--~Fi~LDT~~~~-----------~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~-~~~ 469 (612)
+..||+|+ .|++ |||+||+.... ..+.+|++||+++|+.+. .+.+++|+++|+|+ .+... ...
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi-~t~gi~~md 368 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPI-AVSPIGSEM 368 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCc-ccCCccchh
Confidence 45699999 5845 99999987511 135899999999999863 25688999999998 64221 100
Q ss_pred CCC--------CccchhhHHHHHHHHHhC-CCeEEEecccccc
Q 007227 470 VEG--------SFAEPMGRESLQKLWQKY-KVDIAVFGHVHNY 503 (612)
Q Consensus 470 ~~~--------~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~Y 503 (612)
.-. .......-.+|..+|++| +|-++|+||.|.-
T Consensus 369 ~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 369 EWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 000 000111124899999998 7999999999973
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=3e-12 Score=132.29 Aligned_cols=184 Identities=17% Similarity=0.233 Sum_probs=116.0
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+||+.++|.|..... ......+.+++++. .+||+|+++||++.. |....++...+.++......|+++
T Consensus 1 ~~i~~isD~H~~~~~---------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 70 (301)
T COG1409 1 MRIAHISDLHLGALG---------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIV 70 (301)
T ss_pred CeEEEEecCcccccc---------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEe
Confidence 479999999987310 11233444444442 578999999999954 777677777777775556789999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEe-CCEEEEEEcCCCCC----CCCHHHHHHHHH
Q 007227 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDY-GMFRFCIADTEQDW----REGTEQYRFIEH 439 (612)
Q Consensus 365 ~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~-G~v~Fi~LDT~~~~----~~g~~Q~~WL~~ 439 (612)
++||||....... .+...+.. ....+-.... +.++++.+|+.... ..+..|++||++
T Consensus 71 vpGNHD~~~~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~ 132 (301)
T COG1409 71 VPGNHDARVVNGE--------------AFSDQFFN----RYAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEE 132 (301)
T ss_pred eCCCCcCCchHHH--------------Hhhhhhcc----cCcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHH
Confidence 9999998643211 00111100 0011111222 67899999998642 356899999999
Q ss_pred HHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCC--CeEEEecccccc
Q 007227 440 CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK--VDIAVFGHVHNY 503 (612)
Q Consensus 440 ~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~--VdlvlsGH~H~Y 503 (612)
.|++........+|+++|+|+ .......... . ......+..++..++ |+++|+||.|.-
T Consensus 133 ~l~~~~~~~~~~~v~~~hh~~-~~~~~~~~~~--~--l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 133 ALAAAPERAKDTVVVLHHHPL-PSPGTGVDRV--A--LRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHhCccccCceEEEecCCCC-CCCCCcccee--e--eecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999853221125677777776 4332221111 1 111456777888887 999999999986
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.43 E-value=2e-12 Score=128.95 Aligned_cols=172 Identities=17% Similarity=0.149 Sum_probs=100.8
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+||++++|+|..... ....++++++. ..+||+|+++||+++...... +.+.+.++.+....|++.
T Consensus 2 ~~i~~~sDlH~~~~~-----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 2 LRIAHLSDLHLGPFV-----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CEEEEEeecCCCccC-----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 799999999986421 11223333332 257999999999996543322 345555666666799999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhc
Q 007227 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASV 444 (612)
Q Consensus 365 ~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~ 444 (612)
++||||+.......+. + ......+.+- .+.+..++.++..+.++--... ....+++.+.++..
T Consensus 69 v~GNHD~~~~~~~~~~-------~--~l~~~~v~~L----~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~ 131 (223)
T cd07385 69 VLGNHDYYSGDEENWI-------E--ALESAGITVL----RNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL 131 (223)
T ss_pred ECCCcccccCchHHHH-------H--HHHHcCCEEe----ecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC
Confidence 9999998532110000 0 0000011111 1223445666544443321111 12345666777664
Q ss_pred cCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCc
Q 007227 445 DRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQN 512 (612)
Q Consensus 445 ~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~ 512 (612)
.+..+.|++.|.|. + .+. +.+.++|++++||+|..|...|....
T Consensus 132 --~~~~~~I~l~H~P~-~-----------------~~~----~~~~~~dl~l~GHtHggqi~~~~~~~ 175 (223)
T cd07385 132 --DEDDPNILLAHQPD-T-----------------AEE----AAAWGVDLQLSGHTHGGQIRLPGIGP 175 (223)
T ss_pred --CCCCCEEEEecCCC-h-----------------hHH----hcccCccEEEeccCCCCEEecccccc
Confidence 34567999999985 1 111 15679999999999999988776543
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.1e-12 Score=127.86 Aligned_cols=185 Identities=19% Similarity=0.236 Sum_probs=102.4
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEc
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~ 365 (612)
||++++|+|.... .+ ...+.++++++. ..++|+|+++||++.. . .+..++++.+..+ ..+|++.+
T Consensus 1 ki~~iSDlH~~~~----~~-----~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~-~--~~~~~~~~~l~~~-~~~pv~~v 67 (239)
T TIGR03729 1 KIAFSSDLHIDLN----HF-----DTEEMLETLAQYLKKQKIDHLHIAGDISND-F--QRSLPFIEKLQEL-KGIKVTFN 67 (239)
T ss_pred CEEEEEeecCCCC----CC-----CHHHHHHHHHHHHHhcCCCEEEECCccccc-h--hhHHHHHHHHHHh-cCCcEEEE
Confidence 5899999997421 11 111223333332 1579999999999943 2 2223444444432 46899999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCC-------------------
Q 007227 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD------------------- 426 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~------------------- 426 (612)
+||||+..... +. + ....+. + ....+.++.+..++++|+.++...+
T Consensus 68 ~GNHD~~~~~~---~~------~----~~~~~~-~-~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~ 132 (239)
T TIGR03729 68 AGNHDMLKDLT---YE------E----IESNDS-P-LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSF 132 (239)
T ss_pred CCCCCCCCCCC---HH------H----HHhccc-h-hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcE
Confidence 99999742110 00 0 000000 0 0001122233336677777773111
Q ss_pred -------CC-----CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCC-Cc---cchhhHHHHHHHHHhC
Q 007227 427 -------WR-----EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEG-SF---AEPMGRESLQKLWQKY 490 (612)
Q Consensus 427 -------~~-----~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~-~~---~~~~~r~~l~~ll~k~ 490 (612)
.. ...+|++||++.|++.. ...+|++.|+|+ .......+... .+ ....+.+.|..+++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~---~~~~ivvtH~pP-~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~ 208 (239)
T TIGR03729 133 WFDRRIKRPMSDPERTAIVLKQLKKQLNQLD---NKQVIFVTHFVP-HRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKY 208 (239)
T ss_pred EeecccCCCCChHHHHHHHHHHHHHHHHhcC---CCCEEEEEcccc-hHHHhcCCCCCcchhhhhhccChHHHHHHHHHh
Confidence 10 12678999999998752 234788888876 32100000000 00 0112357899999999
Q ss_pred CCeEEEecccccce
Q 007227 491 KVDIAVFGHVHNYE 504 (612)
Q Consensus 491 ~VdlvlsGH~H~Ye 504 (612)
+|+++|+||+|.-.
T Consensus 209 ~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 209 EIKDVIFGHLHRRF 222 (239)
T ss_pred CCCEEEECCccCCC
Confidence 99999999999854
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.7e-12 Score=119.17 Aligned_cols=125 Identities=19% Similarity=0.279 Sum_probs=83.1
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccC-CCeEEc
Q 007227 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST-VPYMIA 365 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~-vP~~~~ 365 (612)
|+.++|+|.+....... ......++++++. ..++|+|+++||+++. +...+|+.+.+.++.+... +|++.+
T Consensus 1 il~isD~Hl~~~~~~~~-----~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPEL-----LALLSLLDRLLAEIKALDPDLVVITGDLTQR-GLPEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhH-----HHHHHHHHHHHHHHhccCCCEEEECCCCCCC-CCHHHHHHHHHHHHHccccCCcEEEe
Confidence 57899999876421110 0011112223322 2679999999999964 4456677776666665543 699999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhcc
Q 007227 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~ 445 (612)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999993
Q ss_pred CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceee
Q 007227 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 446 r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
|+++|+|+ +..... .... . . .++.+.+++.+++++++|+||+|.....
T Consensus 81 -------iv~~Hhp~-~~~~~~-~~~~-~--~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 -------IVVLHHPL-VPPPGS-GRER-L--L-DAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred -------EEEecCCC-CCCCcc-cccc-C--C-CHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 88889888 543221 1111 1 1 2678999999999999999999996544
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.4e-11 Score=118.65 Aligned_cols=175 Identities=14% Similarity=0.164 Sum_probs=103.4
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
.-|+++++|+|.+ ...++++++.. .++|+|+++||+++.......+..+++.+..+ .+|++
T Consensus 4 ~~kIl~iSDiHgn---------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~ 66 (224)
T cd07388 4 VRYVLATSNPKGD---------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTF 66 (224)
T ss_pred eeEEEEEEecCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceE
Confidence 3689999999853 23445554432 57999999999996432333344455555433 47999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCC-CCCCceEEEEEe-CCEEEEEEcCCCCC--CCCHHHH----H
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPT-ENRAKFWYSTDY-GMFRFCIADTEQDW--REGTEQY----R 435 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~-~~~~~~yYsfd~-G~v~Fi~LDT~~~~--~~g~~Q~----~ 435 (612)
+++||||..-. .+.. ..+.....+|. ...... ...+ |++.|+.++..... ...++|. .
T Consensus 67 ~V~GNhD~~v~---~~l~---------~~~~~~~~~p~~~~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~ 132 (224)
T cd07388 67 YVPGPQDAPLW---EYLR---------EAYNAELVHPEIRNVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 132 (224)
T ss_pred EEcCCCChHHH---HHHH---------HHhcccccCccceecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhh
Confidence 99999996300 0000 00000000111 000111 2344 66999999866432 2344542 5
Q ss_pred HHHH-HHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccc
Q 007227 436 FIEH-CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVH 501 (612)
Q Consensus 436 WL~~-~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H 501 (612)
||.+ .|+...+...+..|++.|.|+ |..+. ...|.+.+..++++++..+++|||+|
T Consensus 133 ~~~~~~l~~~~~~~~~~~VLv~H~PP-~g~g~---------~h~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 133 WVAEYRLKALWELKDYRKVFLFHTPP-YHKGL---------NEQGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hHHHHHHHHHHhCCCCCeEEEECCCC-CCCCC---------CccCHHHHHHHHHHhCCCEEEEcCCc
Confidence 6433 222221123457899999999 76631 12346789999999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.3e-11 Score=120.81 Aligned_cols=197 Identities=12% Similarity=0.104 Sum_probs=108.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCC-cccHHHHHHHhhhccc-cCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIA-STVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g-~~~~wd~f~~~i~~l~-~~vP~~ 363 (612)
||++++|+|.+.......-........++++++++. ..++|+|+++||++.... ....+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 689999999875421110000001123455555543 258999999999996543 2234556666666554 479999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccC---CCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHH
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVP---TENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHC 440 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P---~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~ 440 (612)
+++||||....... +.. ......+..- ..........++.+++.|+.++..... ....+.++++..
T Consensus 81 ~~~GNHD~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~ 149 (223)
T cd00840 81 IIAGNHDSPSRLGA--LSP--------LLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELR 149 (223)
T ss_pred EecCCCCCcccccc--ccc--------hHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHH
Confidence 99999998642210 000 0000001000 001112233345556888888764322 123344555555
Q ss_pred HhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceee
Q 007227 441 LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 441 L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
+... .+..+.|++.|.|+ ...... .. .. .......+...++|++++||.|..+..
T Consensus 150 ~~~~--~~~~~~Il~~H~~~-~~~~~~---~~---~~--~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 150 PRPL--DPDDFNILLLHGGV-AGAGPS---DS---ER--APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred hhcc--CCCCcEEEEEeeee-ecCCCC---cc---cc--cccCcHhhcCcCCCEEECCCcccCeee
Confidence 5543 45667999999997 332211 00 00 122334456788999999999997643
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.3e-11 Score=117.59 Aligned_cols=149 Identities=17% Similarity=0.189 Sum_probs=85.0
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCC
Q 007227 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GN 368 (612)
|+++||+|.+.... ...+.+.+. ..++|+|+++||+++.. ....+.. ..+......|+++++||
T Consensus 1 ~~~iSDlH~~~~~~-----------~~~~~~~~~-~~~~d~li~~GDi~~~~-~~~~~~~---~~~~~~~~~~v~~v~GN 64 (166)
T cd07404 1 IQYLSDLHLEFEDN-----------LADLLNFPI-APDADILVLAGDIGYLT-DAPRFAP---LLLALKGFEPVIYVPGN 64 (166)
T ss_pred CceEccccccCccc-----------cccccccCC-CCCCCEEEECCCCCCCc-chHHHHH---HHHhhcCCccEEEeCCC
Confidence 57899999764210 001111112 26899999999999543 2222222 22233456899999999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCCC
Q 007227 369 HERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQK 448 (612)
Q Consensus 369 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~ 448 (612)
||+.. +|. + ...||.+... +.++.+|+.++++
T Consensus 65 HD~~~----------------------~~~--G---~~~w~~~~~~---------------~~~~~~~~~~d~~------ 96 (166)
T cd07404 65 HEFYV----------------------RII--G---TTLWSDISLF---------------GEAAARMRMNDFR------ 96 (166)
T ss_pred cceEE----------------------EEE--e---eecccccCcc---------------chHHHHhCCCCCC------
Confidence 99730 010 0 0123333221 1245556555544
Q ss_pred CCeEEEEEccccccCCCC-CccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007227 449 QPWLIFLAHRVLGYSSDL-SYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 449 ~~w~Iv~~H~P~~yss~~-~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
+.+|++.|+|+ +.... +....+.. ...+++.+..++++++|+++++||+|...
T Consensus 97 -~~~vv~~HhpP-~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 97 -GKTVVVTHHAP-SPLSLAPQYGDSLV-NAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred -CCEEEEeCCCC-CccccCccccCCCc-chhhhhccHhHHhhcCCCEEEECCccccc
Confidence 34788889988 65432 11111111 11225668888889999999999999864
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.9e-10 Score=118.69 Aligned_cols=170 Identities=16% Similarity=0.167 Sum_probs=95.1
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCe
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (612)
..+||++++|+|.+... + ...++++++. ..+||+|+++||+++.+ ....++.+.+.++.+.+..|+
T Consensus 48 ~~~rI~~lSDlH~~~~~---------~--~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv 115 (271)
T PRK11340 48 APFKILFLADLHYSRFV---------P--LSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPT 115 (271)
T ss_pred CCcEEEEEcccCCCCcC---------C--HHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCE
Confidence 34999999999975321 1 1223333332 26899999999999522 223445666667776667899
Q ss_pred EEccCCCccCCCCCC-CCCCCCCCCCccccccccccccCCCCCCceEEEEEeCC--EEEEEEcCCCCCCCCHHHHHHHHH
Q 007227 363 MIASGNHERDWPGTG-SFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGM--FRFCIADTEQDWREGTEQYRFIEH 439 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~-~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~--v~Fi~LDT~~~~~~g~~Q~~WL~~ 439 (612)
++++||||+...... ..+. + .....-+.+- .+....+..++ +.++.++.... +... ..+
T Consensus 116 ~~V~GNHD~~~~~~~~~~~~------~--~l~~~gi~lL----~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~ 177 (271)
T PRK11340 116 FACFGNHDRPVGTEKNHLIG------E--TLKSAGITVL----FNQATVIATPNRQFELVGTGDLWA---GQCK---PPP 177 (271)
T ss_pred EEecCCCCcccCccchHHHH------H--HHHhcCcEEe----eCCeEEEeeCCcEEEEEEecchhc---cCCC---hhH
Confidence 999999997421100 0000 0 0000001111 12344455543 55666653211 1111 111
Q ss_pred HHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccC
Q 007227 440 CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511 (612)
Q Consensus 440 ~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~ 511 (612)
.++ +....|++.|.|- + . +.+.+.++||+||||+|.-|...|..+
T Consensus 178 ~~~-----~~~~~IlL~H~P~-~-----------------~----~~~~~~~~dL~lsGHTHGGQi~lP~~~ 222 (271)
T PRK11340 178 ASE-----ANLPRLVLAHNPD-S-----------------K----EVMRDEPWDLMLCGHTHGGQLRVPLVG 222 (271)
T ss_pred hcC-----CCCCeEEEEcCCC-h-----------------h----HhhccCCCCEEEeccccCCeEEccccC
Confidence 222 1346899999994 1 0 112457899999999999998877643
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.12 E-value=9e-10 Score=102.99 Aligned_cols=152 Identities=19% Similarity=0.336 Sum_probs=90.2
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+||+++||+|... ..++++++...++|+|+++||++.. .++.+.++.+ |++++.
T Consensus 1 Mki~~~sD~H~~~---------------~~~~~~~~~~~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~ 54 (156)
T PF12850_consen 1 MKIAVISDLHGNL---------------DALEAVLEYINEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVR 54 (156)
T ss_dssp EEEEEEE--TTTH---------------HHHHHHHHHHTTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE-
T ss_pred CEEEEEeCCCCCh---------------hHHHHHHHHhcCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEe
Confidence 5899999999752 2345555554679999999999841 4555555554 999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhc-c
Q 007227 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASV-D 445 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~-~ 445 (612)
||||... + ..... ... +... .
T Consensus 55 GNHD~~~------~-------------~~~~~------~~~---------------------------------~~~~~~ 76 (156)
T PF12850_consen 55 GNHDNWA------F-------------PNEND------EEY---------------------------------LLDALR 76 (156)
T ss_dssp -CCHSTH------H-------------HSEEC------TCS---------------------------------SHSEEE
T ss_pred CCccccc------c-------------hhhhh------ccc---------------------------------ccccee
Confidence 9999631 1 00000 000 1110 0
Q ss_pred CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCC
Q 007227 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGS 525 (612)
Q Consensus 446 r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~ 525 (612)
..-..+.|++.|... +... .. .+.+..++...+++++|+||.|..+...
T Consensus 77 ~~~~~~~i~~~H~~~-~~~~-----------~~-~~~~~~~~~~~~~~~~~~GH~H~~~~~~------------------ 125 (156)
T PF12850_consen 77 LTIDGFKILLSHGHP-YDVQ-----------WD-PAELREILSRENVDLVLHGHTHRPQVFK------------------ 125 (156)
T ss_dssp EEETTEEEEEESSTS-SSST-----------TT-HHHHHHHHHHTTSSEEEESSSSSEEEEE------------------
T ss_pred eeecCCeEEEECCCC-cccc-----------cC-hhhhhhhhcccCCCEEEcCCcccceEEE------------------
Confidence 012356888888765 3321 11 4567788889999999999999977653
Q ss_pred CCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEE
Q 007227 526 LNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTA 566 (612)
Q Consensus 526 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v 566 (612)
.+++.++..|+-+... . ...-+|.++++
T Consensus 126 ~~~~~~~~~Gs~~~~~------------~-~~~~~~~i~~~ 153 (156)
T PF12850_consen 126 IGGIHVINPGSIGGPR------------H-GDQSGYAILDI 153 (156)
T ss_dssp ETTEEEEEE-GSSS-S------------S-SSSEEEEEEEE
T ss_pred ECCEEEEECCcCCCCC------------C-CCCCEEEEEEE
Confidence 1467778787755431 0 11567888887
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.07 E-value=8.5e-09 Score=105.59 Aligned_cols=88 Identities=15% Similarity=0.280 Sum_probs=57.6
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccc--------cChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhc
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYNNFQ--------RGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~--------~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 355 (612)
++.||++.++|||.+...++.-.+.++ ....+.++++++ .++||||+++||+++.......-..++..++|
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~-sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP 129 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLA-SEKPDLVVFTGDNIFGHSTQDAATSLMKAVAP 129 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHh-ccCCCEEEEeCCcccccccHhHHHHHHHHhhh
Confidence 455999999999997642211111111 112345677776 48999999999999763322111234556666
Q ss_pred -cccCCCeEEccCCCccC
Q 007227 356 -IASTVPYMIASGNHERD 372 (612)
Q Consensus 356 -l~~~vP~~~~~GNHD~~ 372 (612)
+..++||.++.||||-.
T Consensus 130 ~I~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 130 AIDRKIPWAAVLGNHDDE 147 (379)
T ss_pred HhhcCCCeEEEecccccc
Confidence 45789999999999965
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=2e-09 Score=96.22 Aligned_cols=96 Identities=29% Similarity=0.425 Sum_probs=69.4
Q ss_pred cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCC
Q 007227 324 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTEN 403 (612)
Q Consensus 324 ~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~ 403 (612)
..++++|+++||+++... ...+..+..........+|+++++||||
T Consensus 24 ~~~~~~vi~~GD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~GNHD--------------------------------- 69 (131)
T cd00838 24 AEKPDFVLVLGDLVGDGP-DPEEVLAAALALLLLLGIPVYVVPGNHD--------------------------------- 69 (131)
T ss_pred ccCCCEEEECCcccCCCC-CchHHHHHHHHHhhcCCCCEEEeCCCce---------------------------------
Confidence 378999999999996544 3444443323334456899999999999
Q ss_pred CCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHH
Q 007227 404 RAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESL 483 (612)
Q Consensus 404 ~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l 483 (612)
|++.|.|+ +....... .. ... .++.+
T Consensus 70 -------------------------------------------------i~~~H~~~-~~~~~~~~-~~--~~~-~~~~~ 95 (131)
T cd00838 70 -------------------------------------------------ILLTHGPP-YDPLDELS-PD--EDP-GSEAL 95 (131)
T ss_pred -------------------------------------------------EEEeccCC-CCCchhhc-cc--chh-hHHHH
Confidence 89999998 54432111 11 011 26788
Q ss_pred HHHHHhCCCeEEEecccccceeee
Q 007227 484 QKLWQKYKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 484 ~~ll~k~~VdlvlsGH~H~YeRt~ 507 (612)
..++.+.+++++|+||.|.+.+..
T Consensus 96 ~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 96 LELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred HHHHHHhCCCEEEeCCeecccccc
Confidence 899999999999999999998874
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.9e-09 Score=107.71 Aligned_cols=78 Identities=10% Similarity=0.095 Sum_probs=56.3
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
...++++.++|+|.... .....+.+.++.+ ..||+|+.+||++.. .....+....+.++++.+..+++
T Consensus 42 ~~~~~iv~lSDlH~~~~---------~~~~~~~~~~i~~--~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~gv~ 109 (284)
T COG1408 42 LQGLKIVQLSDLHSLPF---------REEKLALLIAIAN--ELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLGVF 109 (284)
T ss_pred cCCeEEEEeehhhhchh---------hHHHHHHHHHHHh--cCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCCEE
Confidence 34589999999998642 1112334444444 567999999999963 22344567777788888899999
Q ss_pred EccCCCccCC
Q 007227 364 IASGNHERDW 373 (612)
Q Consensus 364 ~~~GNHD~~~ 373 (612)
++.||||+..
T Consensus 110 av~GNHd~~~ 119 (284)
T COG1408 110 AVLGNHDYGV 119 (284)
T ss_pred EEeccccccc
Confidence 9999999864
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.5e-08 Score=95.27 Aligned_cols=59 Identities=17% Similarity=0.458 Sum_probs=42.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccC
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~G 367 (612)
|++++||+|.. ...++++++...++|.|+++||++.... ... +....|++.+.|
T Consensus 1 ~i~~isD~H~~---------------~~~~~~~~~~~~~~d~ii~~GD~~~~~~-~~~----------~~~~~~~~~V~G 54 (155)
T cd00841 1 KIGVISDTHGS---------------LELLEKALELFGDVDLIIHAGDVLYPGP-LNE----------LELKAPVIAVRG 54 (155)
T ss_pred CEEEEecCCCC---------------HHHHHHHHHHhcCCCEEEECCccccccc-cch----------hhcCCcEEEEeC
Confidence 58999999854 2345566665555999999999995432 211 234578999999
Q ss_pred CCccC
Q 007227 368 NHERD 372 (612)
Q Consensus 368 NHD~~ 372 (612)
|||..
T Consensus 55 NhD~~ 59 (155)
T cd00841 55 NCDGE 59 (155)
T ss_pred CCCCc
Confidence 99974
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.4e-08 Score=91.90 Aligned_cols=117 Identities=20% Similarity=0.336 Sum_probs=75.7
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccC
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~G 367 (612)
||+++||+|.... .++ ..++|+|+++||++. .+...+++.+.+.++.+. ..++++++|
T Consensus 1 ~i~~isD~H~~~~-------------------~~~-~~~~D~vi~~GD~~~-~~~~~~~~~~~~~l~~~~-~~~~~~v~G 58 (135)
T cd07379 1 RFVCISDTHSRHR-------------------TIS-IPDGDVLIHAGDLTE-RGTLEELQKFLDWLKSLP-HPHKIVIAG 58 (135)
T ss_pred CEEEEeCCCCCCC-------------------cCc-CCCCCEEEECCCCCC-CCCHHHHHHHHHHHHhCC-CCeEEEEEC
Confidence 5899999995420 111 267999999999994 344444555555555442 123578999
Q ss_pred CCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCC
Q 007227 368 NHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQ 447 (612)
Q Consensus 368 NHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~ 447 (612)
|||... . .
T Consensus 59 NHD~~~-------------------------------~--------------------------------------~--- 66 (135)
T cd07379 59 NHDLTL-------------------------------D--------------------------------------P--- 66 (135)
T ss_pred CCCCcC-------------------------------C--------------------------------------C---
Confidence 999630 0 1
Q ss_pred CCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007227 448 KQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 448 ~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
..+.|++.|.|+ +....... . ....+.+.+..++++++++++|+||+|...
T Consensus 67 -~~~~ilv~H~~p-~~~~~~~~-~---~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 -EDTDILVTHGPP-YGHLDLVS-S---GQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred -CCCEEEEECCCC-CcCccccc-c---CcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 124688889998 66432111 0 011224577888889999999999999964
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.5e-07 Score=94.53 Aligned_cols=64 Identities=20% Similarity=0.342 Sum_probs=41.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+|++++||+|.... . ... +.++. .+||+|+++||++.. . .++.+.+..+ ..|+++++
T Consensus 1 ~rIa~isDiHg~~~----------~---~~~-~~l~~-~~pD~Vl~~GDi~~~-~-----~~~~~~l~~l--~~p~~~V~ 57 (238)
T cd07397 1 LRIAIVGDVHGQWD----------L---EDI-KALHL-LQPDLVLFVGDFGNE-S-----VQLVRAISSL--PLPKAVIL 57 (238)
T ss_pred CEEEEEecCCCCch----------H---HHH-HHHhc-cCCCEEEECCCCCcC-h-----HHHHHHHHhC--CCCeEEEc
Confidence 58999999995421 1 111 23332 579999999999832 1 1233334332 46899999
Q ss_pred CCCccCC
Q 007227 367 GNHERDW 373 (612)
Q Consensus 367 GNHD~~~ 373 (612)
||||..+
T Consensus 58 GNHD~~~ 64 (238)
T cd07397 58 GNHDAWY 64 (238)
T ss_pred CCCcccc
Confidence 9999865
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.5e-08 Score=99.22 Aligned_cols=182 Identities=17% Similarity=0.233 Sum_probs=94.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCC-Cc---ccHHHHHHHhhhccccC-C
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYAN-GY---ISQWDQFTAQIEPIAST-V 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~-g~---~~~wd~f~~~i~~l~~~-v 360 (612)
+|+++++|+|.+... +...+.+.+.++. ..++|+|+++||++..- |. ........+.++.+... +
T Consensus 1 M~i~~iSDlHl~~~~---------~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~ 71 (241)
T PRK05340 1 MPTLFISDLHLSPER---------PAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGV 71 (241)
T ss_pred CcEEEEeecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCC
Confidence 479999999986431 1112223333322 35799999999999521 11 12223445555655544 8
Q ss_pred CeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHH
Q 007227 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHC 440 (612)
Q Consensus 361 P~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~ 440 (612)
|++.+.||||..... .+. .++|+ -.+|. ...++.++.++++.-.-.. ......|+++++.
T Consensus 72 ~v~~v~GNHD~~~~~--~~~------~~~g~-----~~l~~------~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~r~~ 131 (241)
T PRK05340 72 PCYFMHGNRDFLLGK--RFA------KAAGM-----TLLPD------PSVIDLYGQRVLLLHGDTL-CTDDKAYQRFRRK 131 (241)
T ss_pred eEEEEeCCCchhhhH--HHH------HhCCC-----EEeCC------cEEEEECCEEEEEECCccc-ccCCHHHHHHHHH
Confidence 999999999974210 000 00111 01111 2346667776666543221 1123555555555
Q ss_pred HhhccCCCCCeEEEEEccccccCCCC------------C-ccCCCCccchhhHHHHHHHHHhCCCeEEEeccccccee
Q 007227 441 LASVDRQKQPWLIFLAHRVLGYSSDL------------S-YAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (612)
Q Consensus 441 L~~~~r~~~~w~Iv~~H~P~~yss~~------------~-~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeR 505 (612)
+.. ||...+.|.++ +.... . ......+.... .+.+.+++++++++++++||.|.-..
T Consensus 132 ~r~------~~~~~~~~~~p-~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 132 VRN------PWLQWLFLALP-LSIRLRIAAKMRAKSKAANQSKSLEIMDVN-PEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HhC------HHHHHHHHhCC-HHHHHHHHHHHHHHHHHhcCCCcccccCCC-HHHHHHHHHHhCCCEEEECcccCcce
Confidence 543 12233333333 21100 0 00000011111 45788899999999999999998654
|
|
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.8e-06 Score=83.55 Aligned_cols=65 Identities=17% Similarity=0.324 Sum_probs=42.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccC
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~G 367 (612)
+++++||+|.+.... .....+.+++++ .++|.|+|+||++. . +..+.++.+ ..|++.+.|
T Consensus 1 ~i~viSDtHl~~~~~---------~~~~~~~~~~~~-~~~d~iih~GDi~~----~----~~~~~l~~~--~~~~~~V~G 60 (178)
T cd07394 1 LVLVIGDLHIPHRAS---------DLPAKFKKLLVP-GKIQHVLCTGNLCS----K----ETYDYLKTI--APDVHIVRG 60 (178)
T ss_pred CEEEEEecCCCCCch---------hhHHHHHHHhcc-CCCCEEEECCCCCC----H----HHHHHHHhh--CCceEEEEC
Confidence 478999999654211 112345555554 57999999999984 1 222333332 237899999
Q ss_pred CCccC
Q 007227 368 NHERD 372 (612)
Q Consensus 368 NHD~~ 372 (612)
|||..
T Consensus 61 N~D~~ 65 (178)
T cd07394 61 DFDEN 65 (178)
T ss_pred CCCcc
Confidence 99963
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.3e-08 Score=95.33 Aligned_cols=48 Identities=15% Similarity=0.283 Sum_probs=33.9
Q ss_pred CCCCEEEEcCccccCCCc--ccHHHHHHHhhhcc---ccCCCeEEccCCCccC
Q 007227 325 KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPI---ASTVPYMIASGNHERD 372 (612)
Q Consensus 325 ~~pdfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l---~~~vP~~~~~GNHD~~ 372 (612)
.+||+|+++||+++.... ..+|.++.+.+.++ ...+|++.++||||..
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 589999999999965432 22354444444333 3468999999999986
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.6e-07 Score=86.39 Aligned_cols=63 Identities=17% Similarity=0.317 Sum_probs=42.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+|++++||+|.... ..+.+.++++...++|.|+++||++. ....+.++.+ ..|++.+.
T Consensus 1 m~i~viSD~H~~~~------------~~~~~~~~~~~~~~~d~ii~~GD~~~--------~~~~~~l~~~--~~~~~~V~ 58 (158)
T TIGR00040 1 MKILVISDTHGPLR------------ATELPVELFNLESNVDLVIHAGDLTS--------PFVLKEFEDL--AAKVIAVR 58 (158)
T ss_pred CEEEEEecccCCcc------------hhHhHHHHHhhccCCCEEEEcCCCCC--------HHHHHHHHHh--CCceEEEc
Confidence 48999999995421 12344455554348999999999981 1233333332 35899999
Q ss_pred CCCcc
Q 007227 367 GNHER 371 (612)
Q Consensus 367 GNHD~ 371 (612)
||||.
T Consensus 59 GN~D~ 63 (158)
T TIGR00040 59 GNNDG 63 (158)
T ss_pred cCCCc
Confidence 99996
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=2e-07 Score=87.34 Aligned_cols=183 Identities=16% Similarity=0.200 Sum_probs=95.2
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
++.+++|.|....-. .+.+.+.++....=++|.++ ...-|.|+..|||+.+...+.. ..=++.+..+- .+ -+
T Consensus 2 ~iyaiaDLHLa~~~p-KpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea-~~Dl~~i~~LP-G~-K~ 77 (230)
T COG1768 2 RIYAIADLHLALGVP-KPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLEEA-EEDLRFIGDLP-GT-KY 77 (230)
T ss_pred ceeeeehhhHhhCCC-CceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheechhh-hhhhhhhhcCC-Cc-EE
Confidence 566777777654321 23333333333222333333 2345899999999987654321 11123333221 22 36
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEE---EEEeCCEEEEEE---cCC-CCCCCCHHHH--
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWY---STDYGMFRFCIA---DTE-QDWREGTEQY-- 434 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yY---sfd~G~v~Fi~L---DT~-~~~~~g~~Q~-- 434 (612)
.+.||||+.|+.... . +-.+|.. .+| .|.++++.++.. ++. .++.+-++|-
T Consensus 78 m~rGNHDYWw~s~sk-l---------------~n~lp~~----l~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Dek 137 (230)
T COG1768 78 MIRGNHDYWWSSISK-L---------------NNALPPI----LFYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEK 137 (230)
T ss_pred EEecCCccccchHHH-H---------------HhhcCch----HhhhccceeEeeEEEEEeecccCCCCCcCccchhHHH
Confidence 799999998752210 0 0001110 011 245555444433 222 2232333432
Q ss_pred ------HHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeee
Q 007227 435 ------RFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 435 ------~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~ 507 (612)
.-|+..+.++-++...-.||+.|.|+ +++.. . ...+.+++++++|+.++.||.|.-.|-.
T Consensus 138 i~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP-~s~~~------t------~~~~sevlee~rv~~~lyGHlHgv~~p~ 203 (230)
T COG1768 138 IFLREIGRLRLSADAALPKGVSKFIVMTHYPP-FSDDG------T------PGPFSEVLEEGRVSKCLYGHLHGVPRPN 203 (230)
T ss_pred HHHHHHHHHHHHHHHhcccCcCeEEEEEecCC-CCCCC------C------CcchHHHHhhcceeeEEeeeccCCCCCC
Confidence 22333222222344556899999998 66531 1 1256667889999999999999977654
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.6e-06 Score=83.57 Aligned_cols=177 Identities=20% Similarity=0.309 Sum_probs=99.9
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCC-CcccHHHHHHHhhhccc-cCCCeE
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIA-STVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~-~~vP~~ 363 (612)
.+|+++++|.|.... ++..+..++++ .++|+++.+||++|.. +...+-.+-. .++.+. ..+|++
T Consensus 3 ~mkil~vtDlHg~~~------------~~~k~~~~~~~-~~~D~lviaGDlt~~~~~~~~~~~~~~-~~e~l~~~~~~v~ 68 (226)
T COG2129 3 KMKILAVTDLHGSED------------SLKKLLNAAAD-IRADLLVIAGDLTYFHFGPKEVAEELN-KLEALKELGIPVL 68 (226)
T ss_pred cceEEEEeccccchH------------HHHHHHHHHhh-ccCCEEEEecceehhhcCchHHHHhhh-HHHHHHhcCCeEE
Confidence 379999999986531 12233333332 4899999999999432 1111111100 033333 579999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCC--CC----CCC-HHHHHH
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ--DW----REG-TEQYRF 436 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~--~~----~~g-~~Q~~W 436 (612)
+++||-|-..-. + +....--.+ .+ -+.+.|++.|+.+--.. .| ... .+-+.-
T Consensus 69 avpGNcD~~~v~--~------------~l~~~~~~v-----~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~ 127 (226)
T COG2129 69 AVPGNCDPPEVI--D------------VLKNAGVNV-----HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSK 127 (226)
T ss_pred EEcCCCChHHHH--H------------HHHhccccc-----cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHH
Confidence 999998743100 0 000000000 00 35677777777743211 11 112 233444
Q ss_pred HHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007227 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 437 L~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
|+.-+++.+ .+-.|++.|.|+ |..... ...+ ....|...+..++++.++-+.++||.|-+.
T Consensus 128 l~~~v~~~~---~~~~Il~~HaPP-~gt~~d-~~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHEs~ 188 (226)
T COG2129 128 LKSLVKKAD---NPVNILLTHAPP-YGTLLD-TPSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHESR 188 (226)
T ss_pred HHHHHhccc---CcceEEEecCCC-CCcccc-CCCC--ccccchHHHHHHHHHhCCceEEEeeecccc
Confidence 555555532 122399999999 876432 1111 135567899999999999999999999843
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.60 E-value=4e-07 Score=86.10 Aligned_cols=56 Identities=18% Similarity=0.415 Sum_probs=37.9
Q ss_pred HHHHHHHhcCCCCEEEEcCccccCCC--cccHHHHHHHhhhccc---cCCCeEEccCCCccC
Q 007227 316 TTRQLIQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIEPIA---STVPYMIASGNHERD 372 (612)
Q Consensus 316 ~~~~l~~~~~~pdfvl~~GDi~Y~~g--~~~~wd~f~~~i~~l~---~~vP~~~~~GNHD~~ 372 (612)
.++++++. .+||+|+++||++.... ...+|.++...+..+. ..+|++.++||||..
T Consensus 29 ~~~~~i~~-~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 29 SFQTSLWL-LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHHHHh-cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 34455554 58999999999996432 2245655554444432 258999999999974
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.3e-07 Score=84.91 Aligned_cols=50 Identities=18% Similarity=0.241 Sum_probs=33.6
Q ss_pred eEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceee
Q 007227 451 WLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 451 w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
.+|++.|+|+ +.... ..+ . ...+.+.+..++.+++++++|+||.|.....
T Consensus 57 ~~Ilv~H~pp-~~~~~--~~~--~-~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 57 VDILLTHAPP-AGIGD--GED--F-AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred cCEEEECCCC-CcCcC--ccc--c-cccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 3578888887 53321 111 1 1123678888999999999999999986554
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.5e-07 Score=94.33 Aligned_cols=163 Identities=19% Similarity=0.225 Sum_probs=93.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHH--HhcCCCCEEEEcCccccCCCcc---------------------c
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLI--QDLKNIDIVFHIGDICYANGYI---------------------S 344 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~--~~~~~pdfvl~~GDi~Y~~g~~---------------------~ 344 (612)
||++.++.+.... .......+. ....+|||+||+||.+|++... .
T Consensus 1 r~a~~SC~~~~~~------------~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (228)
T cd07389 1 RFAFGSCNKYESG------------YFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLE 68 (228)
T ss_pred CEEEEECCCCCCC------------CcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHH
Confidence 5788888765432 112223332 1136899999999999987521 1
Q ss_pred H----HHHHH--HhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCc------cc-cccccccccCCC-----CCCc
Q 007227 345 Q----WDQFT--AQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGE------CG-VLVENMFYVPTE-----NRAK 406 (612)
Q Consensus 345 ~----wd~f~--~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge------~g-~~~~~~f~~P~~-----~~~~ 406 (612)
. |..+. ..++.+.+++|++.++.+||+..+..+. ......... .+ ..|......+.. ....
T Consensus 69 ~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~~~-~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~ 147 (228)
T cd07389 69 EYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGGD-GAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGG 147 (228)
T ss_pred HHHHHHHHHcCCHHHHHHhhcCCEEEeccccccccccccc-cccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCce
Confidence 1 11111 2245667889999999999997543221 000000000 00 011111111111 2356
Q ss_pred eEEEEEeCCE-EEEEEcCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHH
Q 007227 407 FWYSTDYGMF-RFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQK 485 (612)
Q Consensus 407 ~yYsfd~G~v-~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ 485 (612)
.|++|.+|.. .|++||++... ..|.+ +. .. |+.|..
T Consensus 148 ~y~~~~~G~~~~~~~lD~R~~R-------------------------------------d~W~~----~~-~e-r~~l~~ 184 (228)
T cd07389 148 IYRSFRFGDLVDLILLDTRTYR-------------------------------------DSWDG----YP-AE-RERLLD 184 (228)
T ss_pred EEEEEecCCcceEEEEeccccc-------------------------------------ccccc----cH-HH-HHHHHH
Confidence 8999999996 99999998754 12211 10 11 778888
Q ss_pred HHHhCCCe--EEEecccccceee
Q 007227 486 LWQKYKVD--IAVFGHVHNYERI 506 (612)
Q Consensus 486 ll~k~~Vd--lvlsGH~H~YeRt 506 (612)
++.+.++. ++|+|++|..+-.
T Consensus 185 ~~~~~~~~~vv~lSGDvH~~~~~ 207 (228)
T cd07389 185 LLAKRKIKNVVFLSGDVHLAEAS 207 (228)
T ss_pred HHHHhCCCCeEEEecHHHHHHHh
Confidence 76665443 8899999986544
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.8e-07 Score=91.37 Aligned_cols=180 Identities=18% Similarity=0.252 Sum_probs=90.0
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHH-------------------
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD------------------- 347 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd------------------- 347 (612)
=++++++|.+... ..++.+..++.+ .++|+|+++||+.-......+|.
T Consensus 6 ~kilA~s~~~g~~------------e~l~~l~~~~~e-~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~ 72 (255)
T PF14582_consen 6 RKILAISNFRGDF------------ELLERLVEVIPE-KGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEEC 72 (255)
T ss_dssp -EEEEEE--TT-H------------HHHHHHHHHHHH-HT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHH
T ss_pred hhheeecCcchHH------------HHHHHHHhhccc-cCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhh
Confidence 3789999985421 134455555555 58999999999987666556666
Q ss_pred -------HHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCC--CCCceEEEEEeCCEEE
Q 007227 348 -------QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE--NRAKFWYSTDYGMFRF 418 (612)
Q Consensus 348 -------~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~--~~~~~yYsfd~G~v~F 418 (612)
.|++.+..+ .+|.+++|||||-.. .-|+. .++....-.|.- -... +.+--|...|
T Consensus 73 ~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~---~~~lr---------~a~~~e~v~p~~~~vH~s--f~~~~g~y~v 136 (255)
T PF14582_consen 73 YDSEALDKFFRILGEL--GVPVFVVPGNMDAPE---RFFLR---------EAYNAEIVTPHIHNVHES--FFFWKGEYLV 136 (255)
T ss_dssp HHHHHHHHHHHHHHCC---SEEEEE--TTS-SH---HHHHH---------HHHHCCCC-TTEEE-CTC--EEEETTTEEE
T ss_pred hhHHHHHHHHHHHHhc--CCcEEEecCCCCchH---HHHHH---------HHhccceeccceeeeeee--ecccCCcEEE
Confidence 666666543 799999999999621 00000 011100001100 0011 1223344666
Q ss_pred EEEcCCCC-------CC--CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh
Q 007227 419 CIADTEQD-------WR--EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK 489 (612)
Q Consensus 419 i~LDT~~~-------~~--~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k 489 (612)
+.+-.+.. +. .-....+|..+.|..+ +..-+|++.|.|+-+..+. ...|.+.+..++++
T Consensus 137 ~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~el---k~~r~IlLfhtpPd~~kg~---------~h~GS~~V~dlIk~ 204 (255)
T PF14582_consen 137 AGMGGEITDDQREEEFKLRYPAWEAEYSLKFLREL---KDYRKILLFHTPPDLHKGL---------IHVGSAAVRDLIKT 204 (255)
T ss_dssp EEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGC---TSSEEEEEESS-BTBCTCT---------BTTSBHHHHHHHHH
T ss_pred EecCccccCCCccccccccchHHHHHHHHHHHHhc---ccccEEEEEecCCccCCCc---------ccccHHHHHHHHHh
Confidence 66654321 00 0122345555666664 3456888899997111110 12335688999999
Q ss_pred CCCeEEEecccccceeee
Q 007227 490 YKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 490 ~~VdlvlsGH~H~YeRt~ 507 (612)
|+.+++|+||+|--.-.+
T Consensus 205 ~~P~ivl~Ghihe~~~~e 222 (255)
T PF14582_consen 205 YNPDIVLCGHIHESHGKE 222 (255)
T ss_dssp H--SEEEE-SSS-EE--E
T ss_pred cCCcEEEecccccchhhH
Confidence 999999999999854333
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.4e-06 Score=94.40 Aligned_cols=52 Identities=17% Similarity=0.215 Sum_probs=33.3
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCC
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYAN 340 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~ 340 (612)
.+||++++|+|.+..... . ........+++++++. ..++|+||++||+....
T Consensus 3 ~mKIlh~SD~HlG~~~~~-~--~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~ 56 (405)
T TIGR00583 3 TIRILVSTDNHVGYGEND-P--VRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHEN 56 (405)
T ss_pred ceEEEEEcCCCCCCccCC-c--hhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCC
Confidence 489999999998742110 0 0111234455665543 26899999999999543
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.9e-07 Score=88.45 Aligned_cols=57 Identities=19% Similarity=0.478 Sum_probs=38.7
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCc--ccHHHHHHHhhhccc-------cCCCeEEccCCCccC
Q 007227 315 NTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA-------STVPYMIASGNHERD 372 (612)
Q Consensus 315 ~~~~~l~~~~~~pdfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~-------~~vP~~~~~GNHD~~ 372 (612)
+++.+++++ .+||+|+++||++..... ..+|.+..+.++.+. ..+|++.++||||+.
T Consensus 35 ~~~~~~i~~-~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 35 RAFKTALQR-LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHHh-cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 345555553 689999999999954322 135665554444332 268999999999985
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.3e-06 Score=86.16 Aligned_cols=74 Identities=15% Similarity=0.222 Sum_probs=45.3
Q ss_pred EEEecCCCCCCCCCCcccccccChHH-HHHHHHHhcCCCCEEEEcCccccC----CCcccHHHHHHHhhhcccc-CCCeE
Q 007227 290 IIFGDMGKDEADGSNEYNNFQRGSLN-TTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPIAS-TVPYM 363 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~s~~-~~~~l~~~~~~pdfvl~~GDi~Y~----~g~~~~wd~f~~~i~~l~~-~vP~~ 363 (612)
++++|+|.+... +...+ .++.+.+...+||+|+++||++.. +......+.+.+.++.+.. .+|++
T Consensus 2 ~~iSDlHl~~~~---------~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPER---------PDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 689999987431 11112 233333322479999999999952 1112222344455555543 58999
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
+++||||+.
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999974
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.4e-05 Score=77.45 Aligned_cols=71 Identities=13% Similarity=0.217 Sum_probs=43.5
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcc-----cHHHHHHHhhhccccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI-----SQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~-----~~wd~f~~~i~~l~~~vP 361 (612)
+|++++||+|.+. + .++.+.+.+++ .++|.|+++||++...... ...++..+.++.+ ..+
T Consensus 1 mri~viSD~Hg~~-----------~-~~~~~l~~~~~-~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 65 (182)
T PRK09453 1 MKLMFASDTHGSL-----------P-ATEKALELFAQ-SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADK 65 (182)
T ss_pred CeEEEEEeccCCH-----------H-HHHHHHHHHHh-cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCc
Confidence 4899999999431 1 12333333332 6899999999998532210 0123334444432 358
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
++.+.||||..
T Consensus 66 v~~V~GNhD~~ 76 (182)
T PRK09453 66 IIAVRGNCDSE 76 (182)
T ss_pred eEEEccCCcch
Confidence 99999999964
|
|
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.6e-06 Score=95.33 Aligned_cols=176 Identities=17% Similarity=0.181 Sum_probs=99.5
Q ss_pred HHHHHHHhcCCCCEEEEcCccccCCCc----c---cHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCc
Q 007227 316 TTRQLIQDLKNIDIVFHIGDICYANGY----I---SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGE 388 (612)
Q Consensus 316 ~~~~l~~~~~~pdfvl~~GDi~Y~~g~----~---~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge 388 (612)
+++.|.+...++|||+++||++--+.- . .......+.+......+|+++++||||.-..+.-. .......
T Consensus 200 ~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~---~~~~~~~ 276 (577)
T KOG3770|consen 200 ALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFA---PGSVPKR 276 (577)
T ss_pred HHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcC---CCCCcch
Confidence 444444444559999999999943310 1 11123344556666799999999999986432100 0000000
Q ss_pred ccc--cc------ccccccCCCC----CCceEEE-EEeCCEEEEEEcCCCCCC----------CCHHHHHHHHHHHhhcc
Q 007227 389 CGV--LV------ENMFYVPTEN----RAKFWYS-TDYGMFRFCIADTEQDWR----------EGTEQYRFIEHCLASVD 445 (612)
Q Consensus 389 ~g~--~~------~~~f~~P~~~----~~~~yYs-fd~G~v~Fi~LDT~~~~~----------~g~~Q~~WL~~~L~~~~ 445 (612)
... .| +..| +|.+. ..+-+|. --+++.++|+||+..-.. .-..|++|+..+|.+++
T Consensus 277 ~~~~wly~~~~~~W~~w-lp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae 355 (577)
T KOG3770|consen 277 HSQLWLYKHLAGAWSTW-LPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAE 355 (577)
T ss_pred hhhhHHHHHHHhhhhcc-CCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHH
Confidence 000 00 0111 23221 1334554 445889999999975321 23678999999999864
Q ss_pred CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCC--CeEEEecccccceee
Q 007227 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK--VDIAVFGHVHNYERI 506 (612)
Q Consensus 446 r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~--VdlvlsGH~H~YeRt 506 (612)
++..-+=+++|.|++ .. ...+.- ...+-.++.++. +-..|.||.|.-+-.
T Consensus 356 -~~GekVhil~HIPpG-~~--------~c~~~w-s~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 356 -SAGEKVHILGHIPPG-DG--------VCLEGW-SINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred -hcCCEEEEEEeeCCC-Cc--------chhhhh-hHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 455557788999982 11 111111 334445555552 446799999986543
|
|
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.4e-05 Score=80.89 Aligned_cols=198 Identities=15% Similarity=0.114 Sum_probs=91.0
Q ss_pred eEEEEEecCCCCCCCC-CCcccccccChHHHHHHHHHhc--CCCCEEEE-cCccccCCCcccHHH---------HHHHhh
Q 007227 287 QQVIIFGDMGKDEADG-SNEYNNFQRGSLNTTRQLIQDL--KNIDIVFH-IGDICYANGYISQWD---------QFTAQI 353 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~-~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~-~GDi~Y~~g~~~~wd---------~f~~~i 353 (612)
++|+.++|+|..-... ...-.....+....+..++++. .+++.++. +||+..... ...+. ...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~-~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSP-LADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccH-HHHHhhhcccCCCChHHHHH
Confidence 4789999998542110 0000000112234455555442 45777766 999985332 12221 122333
Q ss_pred hccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccc-cccccCC--CCCCceEEEEEeC-CEEE--EEEcCCCC-
Q 007227 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPT--ENRAKFWYSTDYG-MFRF--CIADTEQD- 426 (612)
Q Consensus 354 ~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~-~~f~~P~--~~~~~~yYsfd~G-~v~F--i~LDT~~~- 426 (612)
..+ ... +.++||||+++... .+... ..+.+.++- ....... ....+.|.-++.+ ++++ |.+-+...
T Consensus 80 n~~--g~d-~~~lGNHe~d~g~~--~l~~~--~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 80 NAL--GYD-AGTLGNHEFNYGLD--YLDKV--IKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred Hhc--CCC-EEeecccCcccCHH--HHHHH--HHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 322 233 56789999875211 00000 000001100 0000000 0112346667888 7554 44433211
Q ss_pred -C-----------CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCe
Q 007227 427 -W-----------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVD 493 (612)
Q Consensus 427 -~-----------~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vd 493 (612)
+ ....+..++..+.|++ .+...+|++.|... ..... ..... +.....|.++ .+||
T Consensus 153 ~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~-~~~~~----~~~~~----~~~~~~la~~~~~vD 220 (277)
T cd07410 153 NWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGF-ERDLE----ESLTG----ENAAYELAEEVPGID 220 (277)
T ss_pred cccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCc-CCCcc----cccCC----ccHHHHHHhcCCCCc
Confidence 1 0112234444445543 46778999999876 21100 00000 2233344444 5899
Q ss_pred EEEecccccce
Q 007227 494 IAVFGHVHNYE 504 (612)
Q Consensus 494 lvlsGH~H~Ye 504 (612)
++|+||.|...
T Consensus 221 ~IlgGHsH~~~ 231 (277)
T cd07410 221 AILTGHQHRRF 231 (277)
T ss_pred EEEeCCCcccc
Confidence 99999999754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.8e-06 Score=83.86 Aligned_cols=49 Identities=16% Similarity=0.301 Sum_probs=31.8
Q ss_pred cCCCCEEEEcCccccCCCc--ccHHHHHHHhhhccc--------------------cCCCeEEccCCCccCC
Q 007227 324 LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA--------------------STVPYMIASGNHERDW 373 (612)
Q Consensus 324 ~~~pdfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~--------------------~~vP~~~~~GNHD~~~ 373 (612)
.-+||.|+++||+.. .+. .++|.+..+.+..+. ..+|++.++||||..+
T Consensus 42 ~l~Pd~V~fLGDLfd-~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 42 WLKPDAVVVLGDLFS-SQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred hcCCCEEEEeccccC-CCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 368999999999993 343 334443222221111 2489999999999964
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=5.5e-06 Score=84.29 Aligned_cols=185 Identities=14% Similarity=0.054 Sum_probs=87.0
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCC-EEEEcCccccCCCcccHHH---HHHHhhhccccCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWD---QFTAQIEPIASTV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pd-fvl~~GDi~Y~~g~~~~wd---~f~~~i~~l~~~v 360 (612)
++|+.++|+|....+ . -+.+....+..++++. .++| +++..||++..... ..+. ...+.+..+ -
T Consensus 1 l~i~~~sD~hg~~~~-~-----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~-~~~~~~~~~~~~l~~~---g 70 (252)
T cd00845 1 LTILHTNDLHGHFEP-A-----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPP-STATKGEANIELMNAL---G 70 (252)
T ss_pred CEEEEecccccCccc-c-----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccc-hhccCCcHHHHHHHhc---C
Confidence 479999999943210 0 0112234445555442 3577 77999999854332 1111 222223221 2
Q ss_pred CeEEccCCCccCCCCCCCCCCCCCCCCcccccc-cccc-cc---CCCCCCceEEEEEeCCEE--EEEEcCCCCCC---C-
Q 007227 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLV-ENMF-YV---PTENRAKFWYSTDYGMFR--FCIADTEQDWR---E- 429 (612)
Q Consensus 361 P~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~-~~~f-~~---P~~~~~~~yYsfd~G~v~--Fi~LDT~~~~~---~- 429 (612)
.-++++||||+++... .+-.... +.+.++ .... .. ........|.-++.++++ |+.+.+..... +
T Consensus 71 ~d~~~~GNHe~d~g~~-~l~~~~~---~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~ 146 (252)
T cd00845 71 YDAVTIGNHEFDYGLD-ALAELYK---DANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLG 146 (252)
T ss_pred CCEEeeccccccccHH-HHHHHHH---hCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCC
Confidence 3456789999874211 0000000 000010 0000 00 000112335567778754 45554332110 0
Q ss_pred ------CHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccc
Q 007227 430 ------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 430 ------g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
-....+-+++..+. .+.+...+|++.|.+. .. . + .+...+ .+||++|+||.|..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~-~~--------------~-~-~la~~~--~giDlvlggH~H~~ 206 (252)
T cd00845 147 WIIGLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGL-DD--------------D-E-ELAEEV--PGIDVILGGHTHHL 206 (252)
T ss_pred cccCceecCHHHHHHHHHHH-HhCCCCEEEEEeccCc-cc--------------h-H-HHHhcC--CCccEEEcCCcCcc
Confidence 01123334332222 1256788999999876 10 0 1 222111 58999999999986
Q ss_pred ee
Q 007227 504 ER 505 (612)
Q Consensus 504 eR 505 (612)
+.
T Consensus 207 ~~ 208 (252)
T cd00845 207 LE 208 (252)
T ss_pred cC
Confidence 54
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.26 E-value=1e-05 Score=82.82 Aligned_cols=185 Identities=18% Similarity=0.149 Sum_probs=88.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCC-EEEEcCccccCCCcccHH---HHHHHhhhccccCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQW---DQFTAQIEPIASTV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pd-fvl~~GDi~Y~~g~~~~w---d~f~~~i~~l~~~v 360 (612)
++++.+.|+|.-.... .. +.+.+..+..++++. ++++ +++.+||++.... ...+ +...+.++.+ ..
T Consensus 1 ~~il~~nd~~~~~~~~---~~--~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~-~~~~~~g~~~~~~l~~l--~~ 72 (257)
T cd07406 1 FTILHFNDVYEIAPLD---GG--PVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSL-LSTATKGKQMVPVLNAL--GV 72 (257)
T ss_pred CeEEEEccceeecccC---CC--CcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCcc-chhhcCCccHHHHHHhc--CC
Confidence 4788999998321110 00 112244455555542 4577 9999999984332 1111 1222223222 12
Q ss_pred CeEEccCCCccCCCCCCCCCCCCCCCCccccccc-cccccCCC-C---CCceEEEEEeCCEE--EEEEcCCCCC------
Q 007227 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPTE-N---RAKFWYSTDYGMFR--FCIADTEQDW------ 427 (612)
Q Consensus 361 P~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~-~~f~~P~~-~---~~~~yYsfd~G~v~--Fi~LDT~~~~------ 427 (612)
-+.++||||+++... .+... -.+.+.++- ........ . .-+.|.-++.++++ |+.+.+....
T Consensus 73 -d~~~~GNHefd~g~~--~l~~~--~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~ 147 (257)
T cd07406 73 -DLACFGNHEFDFGED--QLQKR--LGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTID 147 (257)
T ss_pred -cEEeecccccccCHH--HHHHH--HhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCC
Confidence 256899999964210 00000 000011110 00000000 0 12457778888855 5555443211
Q ss_pred CCC---HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecccccc
Q 007227 428 REG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNY 503 (612)
Q Consensus 428 ~~g---~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Y 503 (612)
..+ ..-.+.+++.++...+.+...+|++.|-+. . . . + . +.++ .+||++|+||.|..
T Consensus 148 ~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~-~-------~------d--~-~---la~~~~~iD~IlgGH~H~~ 207 (257)
T cd07406 148 PEYVRYRDYVETARELVDELREQGADLIIALTHMRL-P-------N------D--K-R---LAREVPEIDLILGGHDHEY 207 (257)
T ss_pred CCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc-h-------h------h--H-H---HHHhCCCCceEEeccccee
Confidence 000 122233444333322356788999999775 1 0 0 1 2 2223 47999999999986
Q ss_pred e
Q 007227 504 E 504 (612)
Q Consensus 504 e 504 (612)
+
T Consensus 208 ~ 208 (257)
T cd07406 208 I 208 (257)
T ss_pred E
Confidence 6
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.1e-05 Score=77.39 Aligned_cols=195 Identities=17% Similarity=0.169 Sum_probs=98.4
Q ss_pred EEEEEecCCCCCCCCCCcccccccCh---HHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGS---LNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s---~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
|++++||.=.. ++. ...+.++.++ .++||++..||++- .|.... ....+.+.. ..+-+ +
T Consensus 1 ~ilfigdi~g~------------~G~~~~~~~l~~lk~~-~~~D~vi~NgEn~~-gg~gl~-~~~~~~L~~--~G~D~-i 62 (255)
T cd07382 1 KILFIGDIVGK------------PGRKAVKEHLPKLKKE-YKIDFVIANGENAA-GGKGIT-PKIAKELLS--AGVDV-I 62 (255)
T ss_pred CEEEEEeCCCH------------HHHHHHHHHHHHHHHH-CCCCEEEECCcccc-CCCCCC-HHHHHHHHh--cCCCE-E
Confidence 58899998321 111 1233444332 56999999999984 342111 122222222 13344 4
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcC--CCCCCCCHHHHHHHHHHHh
Q 007227 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADT--EQDWREGTEQYRFIEHCLA 442 (612)
Q Consensus 365 ~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT--~~~~~~g~~Q~~WL~~~L~ 442 (612)
+.||||++......+++..+ .+.. --++|.......|+-++.+++++-+++- ......-..-++-+++.++
T Consensus 63 TlGNH~fD~gel~~~l~~~~------~~l~-~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~ 135 (255)
T cd07382 63 TMGNHTWDKKEILDFIDEEP------RLLR-PANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLE 135 (255)
T ss_pred EecccccCcchHHHHHhcCc------CceE-eeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHH
Confidence 55999998642111221100 0000 0122222234457778888866555442 2211111112344566665
Q ss_pred hccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccc
Q 007227 443 SVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYY 522 (612)
Q Consensus 443 ~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y 522 (612)
+.. .+...+||.+|--. .+ + +..+.. ....+||+++.||.|..--- .+.
T Consensus 136 ~lk-~~~D~IIV~~H~g~--ts-----------E---k~ala~-~ldg~VdvIvGtHTHv~t~d-----~~i-------- 184 (255)
T cd07382 136 ELK-EEADIIFVDFHAEA--TS-----------E---KIALGW-YLDGRVSAVVGTHTHVQTAD-----ERI-------- 184 (255)
T ss_pred HHh-cCCCEEEEEECCCC--CH-----------H---HHHHHH-hCCCCceEEEeCCCCccCCc-----cEE--------
Confidence 543 25778999999532 10 1 223332 22346999999999984221 111
Q ss_pred cCCCCCeEEEE-ECCCCCC
Q 007227 523 KGSLNGTIHIA-AGGAGAS 540 (612)
Q Consensus 523 ~~~~~g~vyiv-~G~gG~~ 540 (612)
-++|+.|+. +|+-|..
T Consensus 185 --l~~gTa~itd~Gm~G~~ 201 (255)
T cd07382 185 --LPGGTAYITDVGMTGPY 201 (255)
T ss_pred --eeCCeEEEecCccccCC
Confidence 136777776 5666654
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.1e-06 Score=83.01 Aligned_cols=74 Identities=15% Similarity=0.125 Sum_probs=44.5
Q ss_pred EEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCC-----CcccHHHHH-HHhhhccccCCC
Q 007227 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYAN-----GYISQWDQF-TAQIEPIASTVP 361 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~-----g~~~~wd~f-~~~i~~l~~~vP 361 (612)
++++|+|.+.... ........+.+.. .+++.++++||++..- ......... ...++......+
T Consensus 1 ~~iSDlHlg~~~~---------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 71 (217)
T cd07398 1 LFISDLHLGDGGP---------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTR 71 (217)
T ss_pred CEeeeecCCCCCC---------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCe
Confidence 4789999876421 1122233333321 4899999999999531 111112222 333444456799
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
++.+.||||..
T Consensus 72 v~~v~GNHD~~ 82 (217)
T cd07398 72 VYYVPGNHDFL 82 (217)
T ss_pred EEEECCCchHH
Confidence 99999999975
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.4e-05 Score=79.04 Aligned_cols=191 Identities=18% Similarity=0.238 Sum_probs=99.2
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCCCcc-----------cHHHHHHHhhhcc
Q 007227 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGYI-----------SQWDQFTAQIEPI 356 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~g~~-----------~~wd~f~~~i~~l 356 (612)
|++.||.|..- . .....++.+.+. ..++|++|++||+.-..... ..+..|.+.++..
T Consensus 1 i~v~Gd~HG~~----------~-~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~ 69 (262)
T cd00844 1 IAVEGCCHGEL----------D-KIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGE 69 (262)
T ss_pred CEEEecCCccH----------H-HHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCC
Confidence 57899997521 0 011222333222 24699999999996322111 1233344443332
Q ss_pred c-cCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCC---CCC----
Q 007227 357 A-STVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ---DWR---- 428 (612)
Q Consensus 357 ~-~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~---~~~---- 428 (612)
. ..+|.+++.||||-. .++.....||+. ..+.+.+-. ...+++++++|..|.... ++.
T Consensus 70 ~~~p~~t~fi~GNHE~~-----~~l~~l~~gg~v---~~Ni~~Lg~------~~v~~~~GlrIaGLsG~~~~~~~~~~~~ 135 (262)
T cd00844 70 KKAPILTIFIGGNHEAS-----NYLWELPYGGWV---APNIYYLGY------AGVVNFGGLRIAGLSGIYKSHDYRKGHF 135 (262)
T ss_pred ccCCeeEEEECCCCCCH-----HHHHhhcCCCee---cCcEEEecC------CCEEEECCeEEEEecccccccccccccc
Confidence 2 467779999999952 112111112211 001111111 124667899999887532 111
Q ss_pred ----CCHHHHHHHH-------HHHhhccCCCCCeEEEEEccccccCCCCCccCC-------CCc-----cchhhHHHHHH
Q 007227 429 ----EGTEQYRFIE-------HCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVE-------GSF-----AEPMGRESLQK 485 (612)
Q Consensus 429 ----~g~~Q~~WL~-------~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~-------~~~-----~~~~~r~~l~~ 485 (612)
....+...+. +.|... +.+--|++.|.|+ +.-... +.. ..+ ....|...+..
T Consensus 136 ~~~~~t~~~~rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP-~gI~~~-~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ 210 (262)
T cd00844 136 ERPPYSEDTKRSAYHVRNIEVFKLKQL---KQPIDIFLSHDWP-RGIYKH-GDKKQLLRKKPFFRQDIESGTLGSPAAEE 210 (262)
T ss_pred cCCCCCHHHHHHhhhhhHHHHHHHHhc---CCCCcEEEeCCCC-cchhhc-cchHHhhhcCccchhcccccCCCCHHHHH
Confidence 1122332211 112221 2234699999998 554221 110 000 01335678889
Q ss_pred HHHhCCCeEEEeccccc-ceeeecc
Q 007227 486 LWQKYKVDIAVFGHVHN-YERICPI 509 (612)
Q Consensus 486 ll~k~~VdlvlsGH~H~-YeRt~p~ 509 (612)
|+++.+.+..|+||.|. |++..|-
T Consensus 211 ll~~lkPryhf~gH~H~~f~~~~~~ 235 (262)
T cd00844 211 LLKHLKPRYWFSAHLHVKFAALVPH 235 (262)
T ss_pred HHHHhCCCEEEEecCCcccceecCC
Confidence 99999999999999999 7777543
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00012 Score=74.93 Aligned_cols=198 Identities=15% Similarity=0.083 Sum_probs=104.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccC-hHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRG-SLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~-s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~ 365 (612)
+|++++||.=... ... ....+.++.++ .++||++..||++ ..|.... ....+.+. ...+-++++
T Consensus 1 m~ilfiGDi~G~~----------Gr~~l~~~L~~lk~~-~~~D~vIaNgEn~-~gG~Gi~-~~~~~~L~--~~GvDviT~ 65 (266)
T TIGR00282 1 IKFLFIGDVYGKA----------GRKIVKNNLPQLKSK-YQADLVIANGENT-THGKGLT-LKIYEFLK--QSGVNYITM 65 (266)
T ss_pred CeEEEEEecCCHH----------HHHHHHHHHHHHHHh-CCCCEEEEcCccc-CCCCCCC-HHHHHHHH--hcCCCEEEc
Confidence 4799999983210 000 11233333332 4799999999999 4442111 12222222 224555554
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCC--CCCCC--CHHHHHHHHHHH
Q 007227 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTE--QDWRE--GTEQYRFIEHCL 441 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~--~~~~~--g~~Q~~WL~~~L 441 (612)
|||+++... .+...+.. +. .....++|....+.-|..++.++..+-+++-. ....+ ...=++-+++.+
T Consensus 66 -GNH~~Dkge---~~~~i~~~--~~--~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i 137 (266)
T TIGR00282 66 -GNHTWFQKL---ILDVVINQ--KD--LVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELI 137 (266)
T ss_pred -cchhccCcH---HHHHHhcc--cc--ccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHH
Confidence 999998542 11111110 00 01112334333344566678888776665532 11111 111122344444
Q ss_pred hhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCcc
Q 007227 442 ASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHY 521 (612)
Q Consensus 442 ~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~ 521 (612)
++.+ .+++.+||..|.-- +. .+.....+.+.+|++|+.-|.|.--- +.++
T Consensus 138 ~~lk-~~~d~IIVd~Haea----------------ts-EK~a~~~~ldg~vsaVvGtHtHV~Ta-----D~~i------- 187 (266)
T TIGR00282 138 NMLK-KDCDLIFVDFHAET----------------TS-EKNAFGMAFDGYVTAVVGTHTHVPTA-----DLRI------- 187 (266)
T ss_pred Hhhh-cCCCEEEEEeCCCC----------------HH-HHHHHHHHhCCCccEEEeCCCCCCCC-----ccee-------
Confidence 4432 24678999999432 11 23456667788999999999998321 1111
Q ss_pred ccCCCCCeEEEE-ECCCCCC
Q 007227 522 YKGSLNGTIHIA-AGGAGAS 540 (612)
Q Consensus 522 y~~~~~g~vyiv-~G~gG~~ 540 (612)
-++||-|++ +|+-|..
T Consensus 188 ---l~~gtayitD~Gm~G~~ 204 (266)
T TIGR00282 188 ---LPKGTAYITDVGMTGPF 204 (266)
T ss_pred ---CCCCCEEEecCCcccCc
Confidence 146888987 7887764
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00027 Score=73.68 Aligned_cols=82 Identities=17% Similarity=0.202 Sum_probs=42.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCC-CEEEEcCccccCCCcccHH---HHHHHhhhccccCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQW---DQFTAQIEPIASTV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~p-dfvl~~GDi~Y~~g~~~~w---d~f~~~i~~l~~~v 360 (612)
++|+.++|+|..-.... ....-+.+.+..+..++++. .++ .+++..||++......+.+ ....+.+. .+
T Consensus 1 i~il~tnD~Hg~~~~~~-~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n----~~ 75 (288)
T cd07412 1 VQILAINDFHGRLEPPG-KVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALN----AM 75 (288)
T ss_pred CeEEEEeccccCccCCC-CccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHH----hh
Confidence 47899999985322100 00000122344555555542 234 4899999998443332211 11222222 23
Q ss_pred Ce-EEccCCCccCC
Q 007227 361 PY-MIASGNHERDW 373 (612)
Q Consensus 361 P~-~~~~GNHD~~~ 373 (612)
.+ +.++||||+++
T Consensus 76 g~Da~t~GNHefd~ 89 (288)
T cd07412 76 GVDASAVGNHEFDE 89 (288)
T ss_pred CCeeeeeccccccc
Confidence 33 57789999985
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.93 E-value=9.7e-05 Score=75.95 Aligned_cols=189 Identities=12% Similarity=0.085 Sum_probs=88.2
Q ss_pred eEEEEEecCCCCCCCCC---------CcccccccChHHHHHHHHHhc--C-CCCEE-EEcCccccCCCcccHHHHHHHhh
Q 007227 287 QQVIIFGDMGKDEADGS---------NEYNNFQRGSLNTTRQLIQDL--K-NIDIV-FHIGDICYANGYISQWDQFTAQI 353 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~---------~~~~~~~~~s~~~~~~l~~~~--~-~pdfv-l~~GDi~Y~~g~~~~wd~f~~~i 353 (612)
++|+..+|+|..-.... ..+.. .+-+..+..++++. . ++|.+ +.+||+...... ..+.+....+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~--~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~ 77 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGM--AGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQAMV 77 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccc--cCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCChhHH
Confidence 36788888876432110 00111 12344555555542 3 78877 579999954332 2121111112
Q ss_pred hccccCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccc-ccccccC--CCCCCceEEEEEeCCE--EEEEEcCCCCCC
Q 007227 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLV-ENMFYVP--TENRAKFWYSTDYGMF--RFCIADTEQDWR 428 (612)
Q Consensus 354 ~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~-~~~f~~P--~~~~~~~yYsfd~G~v--~Fi~LDT~~~~~ 428 (612)
.....+++.++.||||++.... .+... -.+.+.++ ....... .....+.|.-++.+++ .||.+.+.....
T Consensus 78 -~~l~~~g~da~~GNHefd~g~~--~l~~~--~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~ 152 (264)
T cd07411 78 -DALNALGVDAMVGHWEFTYGPE--RVREL--FGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPI 152 (264)
T ss_pred -HHHHhhCCeEEecccccccCHH--HHHHH--HhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCccc
Confidence 2223366666559999874211 00000 00000010 0000000 0001123556788885 456665432100
Q ss_pred --C--------CHHHHHHHHHHHhhcc-CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEE
Q 007227 429 --E--------GTEQYRFIEHCLASVD-RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAV 496 (612)
Q Consensus 429 --~--------g~~Q~~WL~~~L~~~~-r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl 496 (612)
+ -....+.+++.+++.. ..+...+|++.|.+. .. . + . +.++ .+||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~-~~-------------~--~-~---la~~~~~iDlil 212 (264)
T cd07411 153 ANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGL-PV-------------D--V-E---LAERVPGIDVIL 212 (264)
T ss_pred ccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCc-hh-------------h--H-H---HHhcCCCCcEEE
Confidence 0 0223444544433321 246788999999765 10 0 1 1 2222 5799999
Q ss_pred ecccccc
Q 007227 497 FGHVHNY 503 (612)
Q Consensus 497 sGH~H~Y 503 (612)
.||.|..
T Consensus 213 gGH~H~~ 219 (264)
T cd07411 213 SGHTHER 219 (264)
T ss_pred eCccccc
Confidence 9999974
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.1e-05 Score=78.03 Aligned_cols=65 Identities=20% Similarity=0.253 Sum_probs=42.5
Q ss_pred EEEecCCCCCCCCCCcccccccChHHHHHHHHHhc----------CCCCEEEEcCccccCCCcccHHHHHHHhhhcc---
Q 007227 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----------KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--- 356 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~----------~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--- 356 (612)
+++||+|.. ...++++++.. .+.|.++++||++. .|... .+.++.+..+
T Consensus 1 ~vi~DIHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vd-rG~~~--~~vl~~l~~l~~~ 62 (208)
T cd07425 1 VAIGDLHGD---------------LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFD-RGPDV--IEILWLLYKLEQE 62 (208)
T ss_pred CEEeCccCC---------------HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcC-CCcCH--HHHHHHHHHHHHH
Confidence 478999754 45677777653 25899999999994 44322 1222322222
Q ss_pred --ccCCCeEEccCCCccC
Q 007227 357 --ASTVPYMIASGNHERD 372 (612)
Q Consensus 357 --~~~vP~~~~~GNHD~~ 372 (612)
....+++++.||||..
T Consensus 63 ~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 63 AAKAGGKVHFLLGNHELM 80 (208)
T ss_pred HHhcCCeEEEeeCCCcHH
Confidence 2356899999999975
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00036 Score=72.43 Aligned_cols=78 Identities=17% Similarity=0.080 Sum_probs=45.4
Q ss_pred eEEEEEeCCEE--EEEEcCCCC--C-C--CC---HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccc
Q 007227 407 FWYSTDYGMFR--FCIADTEQD--W-R--EG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAE 476 (612)
Q Consensus 407 ~yYsfd~G~v~--Fi~LDT~~~--~-~--~g---~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~ 476 (612)
.|.-++.++++ ||.+-+... . . .+ .+..+.+++.+++....+...+|++.|-.. . .
T Consensus 131 p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~--------~------~ 196 (281)
T cd07409 131 PSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGY--------E------V 196 (281)
T ss_pred CeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCc--------h------h
Confidence 45667888855 555544321 0 0 11 223455666666553345788999999654 0 0
Q ss_pred hhhHHHHHHHHHh-CCCeEEEecccccce
Q 007227 477 PMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 477 ~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
. + . +.++ .+||++|.||.|...
T Consensus 197 d--~-~---la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 197 D--K-E---IARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred H--H-H---HHHcCCCCcEEEeCCcCccc
Confidence 0 1 2 2223 489999999999964
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.3e-05 Score=78.93 Aligned_cols=83 Identities=16% Similarity=0.239 Sum_probs=48.8
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcc-cHHHHHHHhhhcccc-C-CC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIAS-T-VP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~~-~-vP 361 (612)
+||++++|+|.+....... .. ......++++++. ..++|+|+++||+....... .....+.+.++.+.. . +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~~-~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--RL-AEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--hH-HHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCce
Confidence 5899999999875321100 00 0012234444332 26799999999999543321 122233444444432 3 89
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999974
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00031 Score=73.12 Aligned_cols=51 Identities=18% Similarity=0.188 Sum_probs=29.1
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
.+...+|++.|-.. .... ..... .+. ...+...+...+||++|.||.|...
T Consensus 172 ~~~D~VI~lsH~G~-~~~~-~~~~~----~~~-~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 172 EKPDIVIAATHMGH-YDNG-EHGSN----APG-DVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCCEEEEEecccc-cCCc-ccccc----Cch-HHHHHHhcCCCCCCEEEeCCCCccc
Confidence 36778999999775 3211 00000 011 1233333323589999999999854
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.76 E-value=4.2e-05 Score=83.16 Aligned_cols=83 Identities=16% Similarity=0.269 Sum_probs=50.6
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHH--HHHHHhhhccc-cCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQW--DQFTAQIEPIA-STVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~w--d~f~~~i~~l~-~~vP 361 (612)
+||++++|+|.+... .+...+. ......+.++++. ..++||||++||+... .....- ..+.+.++.+. .++|
T Consensus 1 mkilHtSD~HLG~~~-~~~~~r~-~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~-~~Ps~~a~~~~~~~l~~l~~~~Ip 77 (390)
T COG0420 1 MKILHTSDWHLGSKQ-LNLPSRL-EDQKKAFDELLEIAKEEKVDFVLIAGDLFDT-NNPSPRALKLFLEALRRLKDAGIP 77 (390)
T ss_pred CeeEEecccccchhh-ccCccch-HHHHHHHHHHHHHHHHccCCEEEEccccccC-CCCCHHHHHHHHHHHHHhccCCCc
Confidence 589999999998311 0000011 1122334443332 2689999999999954 433222 24555555543 5799
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
++++.||||..
T Consensus 78 v~~I~GNHD~~ 88 (390)
T COG0420 78 VVVIAGNHDSP 88 (390)
T ss_pred EEEecCCCCch
Confidence 99999999975
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00029 Score=72.09 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=41.6
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHH---HHHHhhhccccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWD---QFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd---~f~~~i~~l~~~vP 361 (612)
++++.++|+|..-..... +.+.+..+..++++. .+.++++.+||+..... ...+. ...+.+.. ...-
T Consensus 1 i~il~~~D~H~~~~~~~~-----~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~-~~~~~~g~~~~~~ln~--~g~d 72 (257)
T cd07408 1 ITILHTNDIHGRIDEDDN-----NGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLP-ISDLDKGETIIKIMNA--VGYD 72 (257)
T ss_pred CEEEEeccCcccccCCCC-----ccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCch-hhhhcCCcHHHHHHHh--cCCc
Confidence 478999999964321000 112244455555542 25789999999984322 11111 12222222 1334
Q ss_pred eEEccCCCccCC
Q 007227 362 YMIASGNHERDW 373 (612)
Q Consensus 362 ~~~~~GNHD~~~ 373 (612)
+ .++||||+++
T Consensus 73 ~-~~~GNHefd~ 83 (257)
T cd07408 73 A-VTPGNHEFDY 83 (257)
T ss_pred E-EccccccccC
Confidence 4 5689999974
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0013 Score=63.01 Aligned_cols=64 Identities=16% Similarity=0.335 Sum_probs=40.5
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
.+++++||+|...+ ......++. ...++|+|+|+||.+..... +.+-.. -..+++++.
T Consensus 2 m~ilviSDtH~~~~------------~~~~~~~~~-~~~~~d~vih~GD~~~~~~~----~~l~~~-----~~~~i~~V~ 59 (172)
T COG0622 2 MKILVISDTHGPLR------------AIEKALKIF-NLEKVDAVIHAGDSTSPFTL----DALEGG-----LAAKLIAVR 59 (172)
T ss_pred cEEEEEeccCCChh------------hhhHHHHHh-hhcCCCEEEECCCcCCccch----HHhhcc-----cccceEEEE
Confidence 58999999997532 011122222 23789999999999943221 111111 146889999
Q ss_pred CCCccC
Q 007227 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||.|..
T Consensus 60 GN~D~~ 65 (172)
T COG0622 60 GNCDGE 65 (172)
T ss_pred ccCCCc
Confidence 999974
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00022 Score=76.36 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=72.4
Q ss_pred CCceEEEEEecCCCCCCCCCCccc----ccccChHHHHHH---HHHhcCCCCEEEEcCccccCCCc---ccHHHHHHHhh
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYN----NFQRGSLNTTRQ---LIQDLKNIDIVFHIGDICYANGY---ISQWDQFTAQI 353 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~----~~~~~s~~~~~~---l~~~~~~pdfvl~~GDi~Y~~g~---~~~wd~f~~~i 353 (612)
+..+|+++++|.|.-+.-.+..+. .+... --+.+ +....-+||.++++||+.. .|. .++|.+..+.+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D--~~lrr~f~~~~~~lkPdvvffLGDLfD-eG~~~~~eEf~~~~~Rf 122 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGND--WYLRRSFDMSQWRLKPDVVFFLGDLFD-EGQWAGDEEFKKRYERF 122 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhH--HHHHHHHHHHHhccCCCEEEEeccccc-cCccCChHHHHHHHHHH
Confidence 445999999999986532111110 01000 01111 1112368999999999994 343 46777655555
Q ss_pred hccc---cCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCC
Q 007227 354 EPIA---STVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ 425 (612)
Q Consensus 354 ~~l~---~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~ 425 (612)
+.+. ..+|.+.++||||.+..+. .-.....||.- ..++...+|+.|++.|+++|++.
T Consensus 123 kkIf~~k~~~~~~~i~GNhDIGf~~~------------~~~~~i~Rfe~---~fg~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 123 KKIFGRKGNIKVIYIAGNHDIGFGNE------------LIPEWIDRFES---VFGPTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred HHhhCCCCCCeeEEeCCccccccccc------------cchhHHHHHHH---hhcchhhhhccCCceeEEeeehh
Confidence 5443 4799999999999963210 00011123310 01223457899999999999875
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0005 Score=71.37 Aligned_cols=81 Identities=9% Similarity=0.051 Sum_probs=45.2
Q ss_pred eEEEEEeC-CEE--EEEEcCCCC-------CCCC--HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCc
Q 007227 407 FWYSTDYG-MFR--FCIADTEQD-------WREG--TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSF 474 (612)
Q Consensus 407 ~yYsfd~G-~v~--Fi~LDT~~~-------~~~g--~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~ 474 (612)
.|.-++.+ +++ ||.+-+... +... ..|.+|+.+.|++ .+...+|++.|... .. +.
T Consensus 137 ~y~i~~~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~--~~------d~-- 203 (282)
T cd07407 137 RYRKFTTKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPV--RD------DA-- 203 (282)
T ss_pred ceEEEEcCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCC--CC------Cc--
Confidence 35566766 654 565544321 1111 2333588888874 46778999999774 11 11
Q ss_pred cchhhHHHHHHHHHhC-CCe-EEEecccccc
Q 007227 475 AEPMGRESLQKLWQKY-KVD-IAVFGHVHNY 503 (612)
Q Consensus 475 ~~~~~r~~l~~ll~k~-~Vd-lvlsGH~H~Y 503 (612)
.. .+....+.++. ++| ++|.||.|..
T Consensus 204 --~~-~~~~~~la~~~~~id~~Ii~GHsH~~ 231 (282)
T cd07407 204 --EF-KVLHDAIRKIFPDTPIQFLGGHSHVR 231 (282)
T ss_pred --cH-HHHHHHHHHhCCCCCEEEEeCCcccc
Confidence 11 11222333343 577 7999999974
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=9.6e-05 Score=78.85 Aligned_cols=83 Identities=17% Similarity=0.281 Sum_probs=48.6
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCC-cccHHHHHHHh--hhccc-cCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQ--IEPIA-STV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g-~~~~wd~f~~~--i~~l~-~~v 360 (612)
+||++++|+|.+..... .+ ........++++++. ..++|+|+++||+..... ....-..|... ++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~-~~--~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDD-PW--FQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCC-hh--hHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCC
Confidence 58999999998753211 10 011112344554432 268999999999995432 21111123322 33332 369
Q ss_pred CeEEccCCCccC
Q 007227 361 PYMIASGNHERD 372 (612)
Q Consensus 361 P~~~~~GNHD~~ 372 (612)
|+++++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0001 Score=80.41 Aligned_cols=82 Identities=13% Similarity=0.193 Sum_probs=46.6
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHH--HHHHHhhhccc-cCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQW--DQFTAQIEPIA-STVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~w--d~f~~~i~~l~-~~vP 361 (612)
+||++++|+|.+..-.. .... ......++++++. ..+||+|+++||+... +....+ ..+.+.+..+. ..+|
T Consensus 1 mkilh~SDlHlG~~~~~--~~~~-~~~~~~l~~l~~~i~~~~~D~viIaGDifD~-~~p~~~a~~~~~~~l~~L~~~~~~ 76 (407)
T PRK10966 1 MRILHTSDWHLGQNFYS--KSRA-AEHQAFLDWLLEQVQEHQVDAIIVAGDIFDT-GSPPSYARELYNRFVVNLQQTGCQ 76 (407)
T ss_pred CEEEEEcccCCCCcccC--cccH-HHHHHHHHHHHHHHHhcCCCEEEECCccccC-CCCcHHHHHHHHHHHHHHHhcCCc
Confidence 58999999998742100 0000 0011123333332 2689999999999943 332222 22233333332 2589
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
+++++||||..
T Consensus 77 v~~I~GNHD~~ 87 (407)
T PRK10966 77 LVVLAGNHDSV 87 (407)
T ss_pred EEEEcCCCCCh
Confidence 99999999974
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00075 Score=83.16 Aligned_cols=194 Identities=16% Similarity=0.146 Sum_probs=89.8
Q ss_pred CCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEE-cCccccCCCccc--HHHHHHHhhhccc
Q 007227 283 QDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFH-IGDICYANGYIS--QWDQFTAQIEPIA 357 (612)
Q Consensus 283 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~-~GDi~Y~~g~~~--~wd~f~~~i~~l~ 357 (612)
....++|++++|+|..- . ....+..++++ ..+++.|+. +||++....... .+....+.+..
T Consensus 657 ~~~~l~Il~~nD~Hg~l-~-----------g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~-- 722 (1163)
T PRK09419 657 DNWELTILHTNDFHGHL-D-----------GAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKE-- 722 (1163)
T ss_pred CceEEEEEEEeecccCC-C-----------CHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhC--
Confidence 33459999999999431 1 12223333332 146777755 999984332111 11122233322
Q ss_pred cCCCe-EEccCCCccCCCCCC--CCCCCCC--CC----Ccccccc--ccccccCCCC---CCceEEEEEeCCE--EEEEE
Q 007227 358 STVPY-MIASGNHERDWPGTG--SFYGNMD--SG----GECGVLV--ENMFYVPTEN---RAKFWYSTDYGMF--RFCIA 421 (612)
Q Consensus 358 ~~vP~-~~~~GNHD~~~~~~~--~~y~~~d--sg----ge~g~~~--~~~f~~P~~~---~~~~yYsfd~G~v--~Fi~L 421 (612)
+.+ +.++||||+++.... .+..... .. ...+.|+ .+.+...... ....|.-++.+++ -||.+
T Consensus 723 --lg~d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGl 800 (1163)
T PRK09419 723 --MGYDASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGL 800 (1163)
T ss_pred --cCCCEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEe
Confidence 233 569999999753210 0000000 00 0000010 0001000000 1134666788885 45666
Q ss_pred cCCCC---CCC----C---HHHHHHHHHHHhhcc-CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-
Q 007227 422 DTEQD---WRE----G---TEQYRFIEHCLASVD-RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK- 489 (612)
Q Consensus 422 DT~~~---~~~----g---~~Q~~WL~~~L~~~~-r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k- 489 (612)
-+... ..+ + ....+.+++..++.. ..+...+|++.|... ... . ..+ ......|.++
T Consensus 801 tt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~-~~d-~---~~~-------~~~~~~lA~~v 868 (1163)
T PRK09419 801 TTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGS-NQD-R---TTG-------EITGLELAKKV 868 (1163)
T ss_pred cccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCc-ccc-c---ccc-------ccHHHHHHHhC
Confidence 54321 001 0 122333444433332 146788999999875 211 0 001 1123344444
Q ss_pred CCCeEEEecccccce
Q 007227 490 YKVDIAVFGHVHNYE 504 (612)
Q Consensus 490 ~~VdlvlsGH~H~Ye 504 (612)
-+||++|.||.|..-
T Consensus 869 ~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 869 KGVDAIISAHTHTLV 883 (1163)
T ss_pred CCCCEEEeCCCCccc
Confidence 379999999999853
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00025 Score=66.52 Aligned_cols=54 Identities=11% Similarity=0.225 Sum_probs=34.2
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCCCc
Q 007227 315 NTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHE 370 (612)
Q Consensus 315 ~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GNHD 370 (612)
+.++++.+...+.|++|.+||+.-.+.....|..|.+- .....+|.|++-||||
T Consensus 15 ~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~ 68 (150)
T cd07380 15 EKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP 68 (150)
T ss_pred HHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC
Confidence 44455444456799999999999544433334444332 2234688888888886
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0011 Score=75.49 Aligned_cols=199 Identities=17% Similarity=0.145 Sum_probs=87.6
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc------CC-CCEEEEcCccccCCCcccHHHHHHHhhhccc
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL------KN-IDIVFHIGDICYANGYISQWDQFTAQIEPIA 357 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~------~~-pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~ 357 (612)
..++|+.++|+|..-... .+. ..-+..+..++++. .+ .-+++..||+.... ..+.+..-...++ +.
T Consensus 33 ~~ltil~tnD~Hg~~~~~--~~~---~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~~s~~~~g~~~i~-~m 105 (551)
T PRK09558 33 YKITILHTNDHHGHFWRN--EYG---EYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDAEPDFR-GM 105 (551)
T ss_pred eEEEEEEecccCCCcccc--ccC---CccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-EhhhhcCCchhHH-HH
Confidence 458999999999753210 011 11133334444321 13 34788899998422 1111110001111 11
Q ss_pred cCCCe-EEccCCCccCCCCCCCCCCCCCCCCccccccc-cccccCC--CCCCceEEEEEeCCEE--EEEEcCCCC--C-C
Q 007227 358 STVPY-MIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPT--ENRAKFWYSTDYGMFR--FCIADTEQD--W-R 428 (612)
Q Consensus 358 ~~vP~-~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~-~~f~~P~--~~~~~~yYsfd~G~v~--Fi~LDT~~~--~-~ 428 (612)
..+.+ ..++||||+++... .+.... .+...|+- ....... ...-..|.-++.++++ ||.+-+... + .
T Consensus 106 N~~g~Da~tlGNHEFD~G~~--~L~~~~--~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~ 181 (551)
T PRK09558 106 NLIGYDAMAVGNHEFDNPLS--VLRKQE--KWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIGN 181 (551)
T ss_pred hcCCCCEEcccccccCcCHH--HHHHhh--ccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEeccccccccC
Confidence 22222 45679999986321 110000 00001110 0000000 0112346667888855 555543321 1 0
Q ss_pred CC-------HHHHHHHHHHHhhccC-CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhC---CCeEEEe
Q 007227 429 EG-------TEQYRFIEHCLASVDR-QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY---KVDIAVF 497 (612)
Q Consensus 429 ~g-------~~Q~~WL~~~L~~~~r-~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~---~Vdlvls 497 (612)
+. ....+-+++.+++... .+...+|++.|..+ ..... .+ +.. ..-..|.++. +||++|.
T Consensus 182 ~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~-~~~~~----~~---~~~--~~d~~la~~~~~~~IDvIlg 251 (551)
T PRK09558 182 PEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGH-YDDGE----HG---SNA--PGDVEMARSLPAGGLDMIVG 251 (551)
T ss_pred CCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEecccc-ccCCc----cC---CCC--ccHHHHHHhCCccCceEEEe
Confidence 10 1112223333333321 46788999999876 22110 00 000 0112344443 7999999
Q ss_pred cccccce
Q 007227 498 GHVHNYE 504 (612)
Q Consensus 498 GH~H~Ye 504 (612)
||.|.+-
T Consensus 252 GHsH~~~ 258 (551)
T PRK09558 252 GHSQDPV 258 (551)
T ss_pred CCCCccc
Confidence 9999853
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00055 Score=68.06 Aligned_cols=72 Identities=17% Similarity=0.191 Sum_probs=46.4
Q ss_pred EEecCCCCCCCCCCcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCC-CcccHHHHHHHh----hhccc-cCCCeE
Q 007227 291 IFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYAN-GYISQWDQFTAQ----IEPIA-STVPYM 363 (612)
Q Consensus 291 v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~-g~~~~wd~f~~~----i~~l~-~~vP~~ 363 (612)
+++|.|.+... |.....+...+++ ..+.|.++++||++..= |. ..|.++.++ +..++ +.+|++
T Consensus 2 FISDlHL~~~~---------p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~-~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 2 FISDLHLGPKR---------PALTAFFLDFLREEAAQADALYILGDIFDGWIGD-DEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred eeeccccCCCC---------cHHHHHHHHHHHhccccCcEEEEechhhhhhhcC-CcccHHHHHHHHHHHHHHhcCCeEE
Confidence 68999987431 3334455666665 23569999999999531 22 245555433 33333 459999
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||.-
T Consensus 72 ~i~GN~Dfl 80 (237)
T COG2908 72 YIHGNHDFL 80 (237)
T ss_pred EecCchHHH
Confidence 999999964
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0011 Score=74.86 Aligned_cols=204 Identities=14% Similarity=0.139 Sum_probs=95.6
Q ss_pred CCCCceEEEEEecCCCCCCCCCCccccccc--ChHHHHHHHHHh---cCCCCEEEEcCccccCCCcccHHHHHHHhhhcc
Q 007227 282 GQDSLQQVIIFGDMGKDEADGSNEYNNFQR--GSLNTTRQLIQD---LKNIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (612)
Q Consensus 282 g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~--~s~~~~~~l~~~---~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 356 (612)
.....++|+...|+|..-... .+..... +.+..+..++++ ..+..++|.+||+......... ..-.+.+-.+
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~--~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~-~~~g~~~~~~ 98 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPY--DYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY-LTKGEPTVDL 98 (517)
T ss_pred cCceeEEEEEeccccccceec--cccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc-ccCCChHHHH
Confidence 334569999999999754310 1110011 122223333332 2345689999999954332211 0000111112
Q ss_pred ccCCCe-EEccCCCccCCCCCCCCCCCCCCCCcccccc--ccccccCC--CCCCceEEEEEeCCE--EEEEEcCCC--CC
Q 007227 357 ASTVPY-MIASGNHERDWPGTGSFYGNMDSGGECGVLV--ENMFYVPT--ENRAKFWYSTDYGMF--RFCIADTEQ--DW 427 (612)
Q Consensus 357 ~~~vP~-~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P~--~~~~~~yYsfd~G~v--~Fi~LDT~~--~~ 427 (612)
+..++| ..++||||++.... ++... ..+...|+ .+.+.-+. ....+.|.-++.+++ -+|.+.+.. .+
T Consensus 99 mN~m~yDa~tiGNHEFd~g~~--~l~~~--~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~ 174 (517)
T COG0737 99 LNALGYDAMTLGNHEFDYGLE--ALARL--LDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTW 174 (517)
T ss_pred HhhcCCcEEeecccccccCHH--HHHHH--HhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCccccc
Confidence 223444 57999999985321 00000 00000110 00000000 112356778888885 456665421 11
Q ss_pred CC--------CHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecc
Q 007227 428 RE--------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGH 499 (612)
Q Consensus 428 ~~--------g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH 499 (612)
.. -....+++++.+.+.......-+|++.|-++ ...... ..... .. ..... .++|+++.||
T Consensus 175 ~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~-~~d~~~-~~~~~--~~--~~~~~-----~~iD~i~~GH 243 (517)
T COG0737 175 EKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGI-EDDLEL-ASEVP--GD--VDVAV-----PGIDLIIGGH 243 (517)
T ss_pred ccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCc-Cccccc-ccccc--cc--ccccc-----cCcceEeccC
Confidence 11 1234566666666654333678999999886 322111 10000 00 11111 4499999999
Q ss_pred cccc
Q 007227 500 VHNY 503 (612)
Q Consensus 500 ~H~Y 503 (612)
.|.+
T Consensus 244 ~H~~ 247 (517)
T COG0737 244 SHTV 247 (517)
T ss_pred Cccc
Confidence 9974
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0085 Score=68.14 Aligned_cols=79 Identities=18% Similarity=0.134 Sum_probs=42.3
Q ss_pred ceEEEEEeCC--EEEEEEcCCCC-C---CCC-----HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCc
Q 007227 406 KFWYSTDYGM--FRFCIADTEQD-W---REG-----TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSF 474 (612)
Q Consensus 406 ~~yYsfd~G~--v~Fi~LDT~~~-~---~~g-----~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~ 474 (612)
..|.-++.++ |-||.|.+... . .++ ....+=+++..+.....+...+|++.|... .
T Consensus 129 ~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~--~----------- 195 (550)
T TIGR01530 129 KPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGF--E----------- 195 (550)
T ss_pred CceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCc--H-----------
Confidence 3466678887 56777755221 1 111 011121222222222245778999999653 1
Q ss_pred cchhhHHHHHHHHHh-CCCeEEEecccccce
Q 007227 475 AEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 475 ~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
+. . .+.++ .+||++|.||.|.+-
T Consensus 196 -~d--~----~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 196 -KN--C----EIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred -HH--H----HHHhcCCCCCEEEeCCCCccc
Confidence 00 1 12333 379999999999954
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0012 Score=68.12 Aligned_cols=65 Identities=17% Similarity=0.301 Sum_probs=44.7
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+++++||+|.. ...+++++++. .+.|.++++||++ +.|..+ .+..+.+..+ ..++.+
T Consensus 2 ~~~vIGDIHG~---------------~~~l~~ll~~~~~~~~~D~li~lGDlV-drGp~s--~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 2 ATYAIGDIQGC---------------YDELQRLLEKIDFDPAKDTLWLVGDLV-NRGPDS--LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred cEEEEEccCCC---------------HHHHHHHHHhcCCCCCCCEEEEeCCcc-CCCcCH--HHHHHHHHhc--CCCeEE
Confidence 68999999853 34567777654 3689999999999 445432 2334444333 346789
Q ss_pred ccCCCccC
Q 007227 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
+.||||..
T Consensus 62 VlGNHD~~ 69 (275)
T PRK00166 62 VLGNHDLH 69 (275)
T ss_pred EecChhHH
Confidence 99999973
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0069 Score=63.91 Aligned_cols=39 Identities=23% Similarity=0.162 Sum_probs=25.5
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecccccce
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
.+..-+|++.|-.- +. +. + .|.++ -+||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~-~~------------~d--~----~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQ-IS------------IE--Q----ALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccc-cc------------hH--H----HHHhcCCCCCEEEeCCCCccC
Confidence 45778999999631 11 01 1 23444 379999999999863
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0013 Score=66.27 Aligned_cols=67 Identities=19% Similarity=0.303 Sum_probs=44.2
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc----C--------CCCEEEEcCccccCCCcccHHHHHHHhhhc
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----K--------NIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~----~--------~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 355 (612)
|++++||+|.. ...+++++++. . +.|.++++||++ +.|..+ .+-.+.+..
T Consensus 2 ~i~vigDIHG~---------------~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlI-DrG~~s--~evl~~l~~ 63 (234)
T cd07423 2 PFDIIGDVHGC---------------YDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLV-DRGPDS--PEVLRLVMS 63 (234)
T ss_pred CeEEEEECCCC---------------HHHHHHHHHHcCCccccCccccCCCCCEEEEECCcc-CCCCCH--HHHHHHHHH
Confidence 68999999854 34566666653 1 368999999999 445432 233444433
Q ss_pred cccCCCeEEccCCCccC
Q 007227 356 IASTVPYMIASGNHERD 372 (612)
Q Consensus 356 l~~~vP~~~~~GNHD~~ 372 (612)
+...-.+..+.||||..
T Consensus 64 l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 64 MVAAGAALCVPGNHDNK 80 (234)
T ss_pred HhhCCcEEEEECCcHHH
Confidence 33334578999999963
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0012 Score=63.39 Aligned_cols=54 Identities=22% Similarity=0.387 Sum_probs=34.5
Q ss_pred HHHHHHhcCCCCEEEEcCccccCCCcccHHHHH--HHhhhccccCCCeEEccCCCccC
Q 007227 317 TRQLIQDLKNIDIVFHIGDICYANGYISQWDQF--TAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 317 ~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f--~~~i~~l~~~vP~~~~~GNHD~~ 372 (612)
+.+++++ .+||.|+++||+++..... .+..+ ..........+|++.+.||||..
T Consensus 33 l~~~~~~-~~~d~lii~GDl~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 33 LDRLIEE-YGPERLIILGDLKHSFGGL-SRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHh-cCCCEEEEeCccccccccc-CHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 3344433 6899999999999653321 12221 11233345678999999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0013 Score=66.48 Aligned_cols=68 Identities=13% Similarity=0.309 Sum_probs=41.8
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---C-CCCEEEEcCccccCCCcccHHHHHHHhh-hccccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---K-NIDIVFHIGDICYANGYISQWDQFTAQI-EPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~-~pdfvl~~GDi~Y~~g~~~~wd~f~~~i-~~l~~~vP 361 (612)
+|++++||+|.. ...++++++.. . ..|.++++||++ +.|..+. +..+.+ +.+....+
T Consensus 1 m~~~~IsDIHG~---------------~~~l~~ll~~i~~~~~~~d~li~lGD~i-DrG~~s~--~v~~~l~~~~~~~~~ 62 (235)
T PHA02239 1 MAIYVVPDIHGE---------------YQKLLTIMDKINNERKPEETIVFLGDYV-DRGKRSK--DVVNYIFDLMSNDDN 62 (235)
T ss_pred CeEEEEECCCCC---------------HHHHHHHHHHHhhcCCCCCEEEEecCcC-CCCCChH--HHHHHHHHHhhcCCC
Confidence 378999999943 12344444432 1 359999999999 4554332 222222 21223457
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
+++++||||..
T Consensus 63 ~~~l~GNHE~~ 73 (235)
T PHA02239 63 VVTLLGNHDDE 73 (235)
T ss_pred eEEEECCcHHH
Confidence 89999999963
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0014 Score=65.74 Aligned_cols=84 Identities=13% Similarity=0.081 Sum_probs=50.2
Q ss_pred eEEEEEecCCCCCCCCCCccccccc--ChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCe
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQR--GSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~--~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (612)
-+.++++|.|.+....-.......| ...++++++.+. ..+||.|+++||+.+.......|..+.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 3588999999874210000000011 112344554442 257999999999997554324555555555543 3599
Q ss_pred EEccCCCccC
Q 007227 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~~~GNHD~~ 372 (612)
+.+.||||..
T Consensus 93 ~~V~GNHD~~ 102 (225)
T TIGR00024 93 ILIRGNHDAL 102 (225)
T ss_pred EEECCCCCCc
Confidence 9999999963
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0018 Score=65.66 Aligned_cols=76 Identities=13% Similarity=0.306 Sum_probs=47.0
Q ss_pred EEEecCCCCCCCCCCcccccccChHHHHHHHHHhc----CCCCEEEEcCccccCCC----c---------ccHHHHHHHh
Q 007227 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----KNIDIVFHIGDICYANG----Y---------ISQWDQFTAQ 352 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~----~~pdfvl~~GDi~Y~~g----~---------~~~wd~f~~~ 352 (612)
++++|+|.+... . .......+.+.++.. .++|.|+++||++.... . ...+..+.+.
T Consensus 2 ~~iSDlHl~~~~----~---~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (243)
T cd07386 2 VFISDVHVGSKT----F---LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEY 74 (243)
T ss_pred EEecccCCCchh----h---hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHH
Confidence 689999976421 0 011122333333321 25799999999995421 0 1123445566
Q ss_pred hhccccCCCeEEccCCCccC
Q 007227 353 IEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 353 i~~l~~~vP~~~~~GNHD~~ 372 (612)
++.+.+.+|+++++||||..
T Consensus 75 l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 75 LSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHhcccCCeEEEeCCCCCcc
Confidence 67777789999999999974
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0023 Score=65.09 Aligned_cols=66 Identities=18% Similarity=0.220 Sum_probs=43.7
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC-----------CCCEEEEcCccccCCCcccHHHHHHHhhhcc
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK-----------NIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~-----------~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 356 (612)
|++++||+|.. ...++++++... .-|.++++||++ ++|..+ .+.++.+..+
T Consensus 2 ~~~vIGDIHG~---------------~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDli-DRGp~S--~~vl~~~~~~ 63 (245)
T PRK13625 2 KYDIIGDIHGC---------------YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLT-DRGPHS--LRMIEIVWEL 63 (245)
T ss_pred ceEEEEECccC---------------HHHHHHHHHHcCCCcccCcccCCCCCEEEEECccc-CCCcCh--HHHHHHHHHH
Confidence 68999999843 455677776521 247899999999 556433 2233333333
Q ss_pred ccCCCeEEccCCCcc
Q 007227 357 ASTVPYMIASGNHER 371 (612)
Q Consensus 357 ~~~vP~~~~~GNHD~ 371 (612)
...-.++++.||||.
T Consensus 64 ~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 64 VEKKAAYYVPGNHCN 78 (245)
T ss_pred hhCCCEEEEeCccHH
Confidence 334578999999995
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0028 Score=62.63 Aligned_cols=63 Identities=17% Similarity=0.231 Sum_probs=42.2
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
|++++||+|.. ...++++++.. .++|.++++||+++. |... .+.++.+.. .+++.
T Consensus 2 ri~~isDiHg~---------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~-g~~~--~~~~~~l~~----~~~~~ 59 (207)
T cd07424 2 RDFVVGDIHGH---------------YSLLQKALDAVGFDPARDRLISVGDLIDR-GPES--LACLELLLE----PWFHA 59 (207)
T ss_pred CEEEEECCCCC---------------HHHHHHHHHHcCCCCCCCEEEEeCCcccC-CCCH--HHHHHHHhc----CCEEE
Confidence 68999999843 34566666653 368999999999953 3322 233333322 46889
Q ss_pred ccCCCccC
Q 007227 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
+.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999964
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0037 Score=70.16 Aligned_cols=82 Identities=13% Similarity=0.314 Sum_probs=50.8
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHH-h-------cCCCCEEEEcCccccCCCc-------------
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ-D-------LKNIDIVFHIGDICYANGY------------- 342 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~-~-------~~~pdfvl~~GDi~Y~~g~------------- 342 (612)
+..+++++++|+|.+... + ....+..+.+.+. . ..+++.|+++||++...+.
T Consensus 241 ~~~~~i~~ISDlHlgs~~----~---~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~ 313 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKE----F---LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDI 313 (504)
T ss_pred CCccEEEEEcccCCCCcc----h---hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhh
Confidence 345899999999987531 0 0111222222222 0 2579999999999953221
Q ss_pred ccHHHHHHHhhhccccCCCeEEccCCCccC
Q 007227 343 ISQWDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 343 ~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~ 372 (612)
..+++.+.+.++.+...+|+++++||||..
T Consensus 314 ~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 314 YEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 012334455566667789999999999974
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0026 Score=60.80 Aligned_cols=49 Identities=20% Similarity=0.377 Sum_probs=31.3
Q ss_pred HHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCCCccC
Q 007227 318 RQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 318 ~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~ 372 (612)
+.+.+...++|.|+++||++.. +....+ .+.++.+ ..|++.+.||||..
T Consensus 34 ~~~~~~~~~~d~vi~~GDl~~~-~~~~~~---~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 34 RNWNETVGPDDTVYHLGDFSFG-GKAGTE---LELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred HHHhhhcCCCCEEEEeCCCCCC-CChHHH---HHHHHhC--CCCeEEEeCCCCch
Confidence 3333334578999999999954 332222 2233322 35899999999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.004 Score=62.35 Aligned_cols=66 Identities=18% Similarity=0.251 Sum_probs=42.9
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC----------CCCEEEEcCccccCCCcccHHHHHHHhhhcccc
Q 007227 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS 358 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~----------~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~ 358 (612)
+.++||+|.. ...+++++++.. ..|.++++||++ +.|..+ .+..+.+..+..
T Consensus 1 ~~vIGDIHG~---------------~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~I-DRGp~S--~~vl~~l~~l~~ 62 (222)
T cd07413 1 YDFIGDIHGH---------------AEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLI-DRGPEI--RELLEIVKSMVD 62 (222)
T ss_pred CEEEEeccCC---------------HHHHHHHHHHcCCCccccccCCCCCEEEEeCccc-CCCCCH--HHHHHHHHHhhc
Confidence 3689999853 456677776531 357999999999 555433 233343333333
Q ss_pred CCCeEEccCCCccC
Q 007227 359 TVPYMIASGNHERD 372 (612)
Q Consensus 359 ~vP~~~~~GNHD~~ 372 (612)
.-..+.+.||||..
T Consensus 63 ~~~~~~l~GNHE~~ 76 (222)
T cd07413 63 AGHALAVMGNHEFN 76 (222)
T ss_pred CCCEEEEEccCcHH
Confidence 33688899999963
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.063 Score=53.63 Aligned_cols=198 Identities=18% Similarity=0.180 Sum_probs=109.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+|++++||+=... |. ....+.+.++.++ -++||||..|-++ +.|.---|+.|.+.++. .+- .++.
T Consensus 1 mriLfiGDvvGk~--Gr-------~~v~~~Lp~lk~k-yk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~d-viT~ 65 (266)
T COG1692 1 MRILFIGDVVGKP--GR-------KAVKEHLPQLKSK-YKIDFVIVNGENA-AGGFGITEKIYKELLEA---GAD-VITL 65 (266)
T ss_pred CeEEEEecccCcc--hH-------HHHHHHhHHHHHh-hcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCC-EEec
Confidence 4899999983211 00 0011233344333 5799999999999 77766566776666543 233 3689
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCC--CCCCC-CHHHHHHHHHHHhh
Q 007227 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTE--QDWRE-GTEQYRFIEHCLAS 443 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~--~~~~~-g~~Q~~WL~~~L~~ 443 (612)
|||=++.+..-.|.+..+ ..-+-.++|....+.-|+-|+..+..+.+++-. ....+ -..-.+=+++.|..
T Consensus 66 GNH~wd~~ei~~~i~~~~-------~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~ 138 (266)
T COG1692 66 GNHTWDQKEILDFIDNAD-------RILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDE 138 (266)
T ss_pred ccccccchHHHHHhhccc-------ceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHh
Confidence 999987433211111100 000112344444566777788877666666532 11111 11223445566665
Q ss_pred ccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCcccc
Q 007227 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYK 523 (612)
Q Consensus 444 ~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~ 523 (612)
.+ .+++.+||-.|.-- +| | .++| -++.+-+|.+|+.=|+|.-.. +.++
T Consensus 139 ~~-~~~~~iiVDFHAEt--TS-----------E---K~a~-g~yldGrvsavvGTHTHV~Ta-----D~rI--------- 186 (266)
T COG1692 139 IK-LGTDLIIVDFHAET--TS-----------E---KNAF-GWYLDGRVSAVVGTHTHVPTA-----DERI--------- 186 (266)
T ss_pred Cc-cCCceEEEEccccc--hh-----------h---hhhh-heEEcCeEEEEEeccCccccc-----ccee---------
Confidence 42 45678999999542 11 1 1111 123355789999999998432 2222
Q ss_pred CCCCCeEEEE-ECCCCC
Q 007227 524 GSLNGTIHIA-AGGAGA 539 (612)
Q Consensus 524 ~~~~g~vyiv-~G~gG~ 539 (612)
-++|+-|++ +|+-|.
T Consensus 187 -L~~GTayiTDvGMtG~ 202 (266)
T COG1692 187 -LPKGTAYITDVGMTGP 202 (266)
T ss_pred -cCCCcEEEecCccccc
Confidence 236888887 677665
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0051 Score=61.43 Aligned_cols=63 Identities=19% Similarity=0.249 Sum_probs=42.3
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
|++++||+|.. ...+++++++. .+.|-++++||++ +.|..+ .+-.+.+.. ..+..
T Consensus 18 ri~vigDIHG~---------------~~~L~~lL~~i~~~~~~D~li~lGDlv-DrGp~s--~~vl~~l~~----~~~~~ 75 (218)
T PRK11439 18 HIWLVGDIHGC---------------FEQLMRKLRHCRFDPWRDLLISVGDLI-DRGPQS--LRCLQLLEE----HWVRA 75 (218)
T ss_pred eEEEEEcccCC---------------HHHHHHHHHhcCCCcccCEEEEcCccc-CCCcCH--HHHHHHHHc----CCceE
Confidence 89999999854 45567777663 2578999999999 445432 122333322 24578
Q ss_pred ccCCCccC
Q 007227 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
+.||||..
T Consensus 76 v~GNHE~~ 83 (218)
T PRK11439 76 VRGNHEQM 83 (218)
T ss_pred eeCchHHH
Confidence 99999953
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0061 Score=60.87 Aligned_cols=62 Identities=19% Similarity=0.338 Sum_probs=41.5
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
|++++||+|.. ...+++++++. .+.|.++++||++. .|... .+.++.++ .-.++.
T Consensus 16 ri~visDiHg~---------------~~~l~~~l~~~~~~~~~d~l~~lGD~vd-rG~~~--~~~l~~l~----~~~~~~ 73 (218)
T PRK09968 16 HIWVVGDIHGE---------------YQLLQSRLHQLSFCPETDLLISVGDNID-RGPES--LNVLRLLN----QPWFIS 73 (218)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHhcCCCCCCCEEEECCCCcC-CCcCH--HHHHHHHh----hCCcEE
Confidence 89999999853 34566666653 36899999999994 44322 12223222 124678
Q ss_pred ccCCCcc
Q 007227 365 ASGNHER 371 (612)
Q Consensus 365 ~~GNHD~ 371 (612)
+.||||.
T Consensus 74 v~GNHE~ 80 (218)
T PRK09968 74 VKGNHEA 80 (218)
T ss_pred EECchHH
Confidence 9999996
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.02 Score=70.87 Aligned_cols=48 Identities=27% Similarity=0.339 Sum_probs=30.3
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecccccce
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
.+...+|++.|..+ .... ...+ . .+....|.++ -+||++|.||.|...
T Consensus 233 ~gaDvII~l~H~G~--~~~~--~~~~-----~-en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGI--ESEY--QSSG-----A-EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCc--CCCC--CCCC-----c-chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 46788999999875 1111 0011 1 2233445545 489999999999964
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.052 Score=64.03 Aligned_cols=62 Identities=21% Similarity=0.271 Sum_probs=33.2
Q ss_pred cCCCCCCCCceEEEEEecCCCCCCCCCCcccc--cccChHHHHHHHHHhc--CCC-CEEEEcCccccC
Q 007227 277 ASPYPGQDSLQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYA 339 (612)
Q Consensus 277 T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~l~~~~--~~p-dfvl~~GDi~Y~ 339 (612)
+.|..+....++|+...|+|..-.. ...|.. -..+-+..+..++++. +++ -++|..||++..
T Consensus 106 ~~~~~~~~~~LtIL~TnDiHg~l~~-~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQG 172 (814)
T PRK11907 106 SKPVEGQTVDVRILSTTDLHTNLVN-YDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQG 172 (814)
T ss_pred CCCccCCceEEEEEEEEeecCCccc-ccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCC
Confidence 4455455556999999999975321 000110 0111233344444431 223 478899999953
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.093 Score=61.78 Aligned_cols=53 Identities=15% Similarity=0.205 Sum_probs=29.1
Q ss_pred ceEEEEEecCCCCCCCCCCcccc--cccChHHHHHHHHHhc--CCC-CEEEEcCccccC
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYA 339 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~l~~~~--~~p-dfvl~~GDi~Y~ 339 (612)
.++|+...|+|..-.. ...|.. -....+..+..++++. +++ -++|..||++..
T Consensus 39 ~L~IL~TnDiHg~l~~-~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqG 96 (780)
T PRK09418 39 NLRILETSDIHVNLMN-YDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQG 96 (780)
T ss_pred EEEEEEEeecCCCCcC-cCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCC
Confidence 4899999999976421 101110 0111233444455432 223 488899999943
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.074 Score=54.39 Aligned_cols=180 Identities=11% Similarity=0.078 Sum_probs=94.3
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHH-h---------cCCCCEEEEcCccccCCCc----------------
Q 007227 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ-D---------LKNIDIVFHIGDICYANGY---------------- 342 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~-~---------~~~pdfvl~~GDi~Y~~g~---------------- 342 (612)
+++++|.+.+... . ....++.+...+. + ..++.-+|++||.+...+.
T Consensus 2 i~~vSgL~ig~~~----~---~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~ 74 (257)
T cd07387 2 IALVSGLGLGGNA----E---SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSS 74 (257)
T ss_pred EEEEcccccCCCc----c---chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccc
Confidence 7889999987541 1 1112233333222 1 1245579999999964321
Q ss_pred ---ccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccc---cccccCCCCCCceEEEEEeCCE
Q 007227 343 ---ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE---NMFYVPTENRAKFWYSTDYGMF 416 (612)
Q Consensus 343 ---~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~---~~f~~P~~~~~~~yYsfd~G~v 416 (612)
..+.+++.+.+..+.+.+|+.+++||||-....- ....-..|-.+-. ..+.. -.|. |.|+.+++
T Consensus 75 ~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~l-----PQqplh~~lfp~s~~~~~~~~----vtNP-~~~~i~g~ 144 (257)
T cd07387 75 AASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSL-----PQQPLHRCLFPKSSNYSTLNL----VTNP-YEFSIDGV 144 (257)
T ss_pred hhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccC-----CCCCCCHHHhhcccccCCcEE----eCCC-eEEEECCE
Confidence 1234445556667788999999999999642110 0000011100000 00111 1222 46999999
Q ss_pred EEEEEcCCCC-----CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCC
Q 007227 417 RFCIADTEQD-----WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK 491 (612)
Q Consensus 417 ~Fi~LDT~~~-----~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~ 491 (612)
+|++.+...- +.+.+.-.+.|++.|+- | |--+.+...-+..... -.+++ .-+.-
T Consensus 145 ~vLgtsGqni~Di~ky~~~~~~l~~me~~L~w--r----------HlaPTaPDTL~~yP~~-~~Dpf--------vi~~~ 203 (257)
T cd07387 145 RVLGTSGQNVDDILKYSSLESRLDILERTLKW--R----------HIAPTAPDTLWCYPFT-DRDPF--------ILEEC 203 (257)
T ss_pred EEEEECCCCHHHHHHhCCCCCHHHHHHHHHHh--c----------ccCCCCCCccccccCC-CCCce--------eecCC
Confidence 9998887641 23344557788888864 1 3222122211100000 00122 12334
Q ss_pred CeEEEecccccceee
Q 007227 492 VDIAVFGHVHNYERI 506 (612)
Q Consensus 492 VdlvlsGH~H~YeRt 506 (612)
.+++++||.|.|+..
T Consensus 204 PhVyf~Gnq~~f~t~ 218 (257)
T cd07387 204 PHVYFAGNQPKFGTK 218 (257)
T ss_pred CCEEEeCCCcceeee
Confidence 899999999998765
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.009 Score=61.15 Aligned_cols=63 Identities=17% Similarity=0.283 Sum_probs=42.5
Q ss_pred EEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
.++||+|.. ...+++++++. ++.|.++++||++ +.|..+ .+..+.+..+. ..+..++
T Consensus 2 yvIGDIHG~---------------~~~L~~LL~~i~~~~~~D~Li~lGDlV-dRGp~s--~evl~~l~~l~--~~v~~Vl 61 (257)
T cd07422 2 YAIGDIQGC---------------YDELQRLLEKINFDPAKDRLWLVGDLV-NRGPDS--LETLRFVKSLG--DSAKTVL 61 (257)
T ss_pred EEEECCCCC---------------HHHHHHHHHhcCCCCCCCEEEEecCcC-CCCcCH--HHHHHHHHhcC--CCeEEEc
Confidence 589999854 34567776653 3579999999999 555433 23344443332 3678999
Q ss_pred CCCccC
Q 007227 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 62 GNHD~~ 67 (257)
T cd07422 62 GNHDLH 67 (257)
T ss_pred CCchHH
Confidence 999974
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.068 Score=53.99 Aligned_cols=171 Identities=16% Similarity=0.091 Sum_probs=83.9
Q ss_pred CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q 007227 325 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR 404 (612)
Q Consensus 325 ~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~ 404 (612)
.++|||+..|.++ +.|.---.+.+.+.++ ..+-+ ++.|||=++.++.-.+.+.. ...-+-.++|....
T Consensus 26 ~~~DfVIaNgENa-a~G~Git~~~~~~L~~---~GvDv-iT~GNH~wdkkei~~~i~~~-------~~ilRPaN~p~~~p 93 (253)
T PF13277_consen 26 YGIDFVIANGENA-AGGFGITPKIAEELFK---AGVDV-ITMGNHIWDKKEIFDFIDKE-------PRILRPANYPPGTP 93 (253)
T ss_dssp -G-SEEEEE-TTT-TTTSS--HHHHHHHHH---HT-SE-EE--TTTTSSTTHHHHHHH--------SSEE--TTS-TT-S
T ss_pred cCCCEEEECCccc-CCCCCCCHHHHHHHHh---cCCCE-EecCcccccCcHHHHHHhcC-------CCcEECCCCCCCCC
Confidence 4799999999999 6665322222222221 23333 68899998753321111100 00001123455556
Q ss_pred CceEEEEEeCCEEEEEEcCC--CCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHH
Q 007227 405 AKFWYSTDYGMFRFCIADTE--QDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRES 482 (612)
Q Consensus 405 ~~~yYsfd~G~v~Fi~LDT~--~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~ 482 (612)
++-|..++.++..+.+++-. ....+-.-=+.-+++.|++. +.+++.+||=.|.=. .. .+.
T Consensus 94 G~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAEa-------------TS----EK~ 155 (253)
T PF13277_consen 94 GRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAEA-------------TS----EKQ 155 (253)
T ss_dssp SBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S--------------HH----HHH
T ss_pred cCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecCc-------------HH----HHH
Confidence 77899999999887777643 22222222344555555554 357788999899432 00 123
Q ss_pred HHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEE-ECCCCCC
Q 007227 483 LQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIA-AGGAGAS 540 (612)
Q Consensus 483 l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv-~G~gG~~ 540 (612)
-.-.+.+-+|.+|+.=|+|.- ..+.++ -++||-||+ +|+-|..
T Consensus 156 A~g~~lDGrvsaV~GTHTHVq-----TaDerI----------Lp~GTaYiTDvGMtG~~ 199 (253)
T PF13277_consen 156 AMGWYLDGRVSAVVGTHTHVQ-----TADERI----------LPGGTAYITDVGMTGPY 199 (253)
T ss_dssp HHHHHHBTTBSEEEEESSSS------BS--EE-----------TTS-EEES---EBEES
T ss_pred HHHHHhCCcEEEEEeCCCCcc-----Cchhhc----------cCCCCEEEecCccccCc
Confidence 334556789999999999982 222222 246888886 6776664
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.08 Score=49.29 Aligned_cols=80 Identities=13% Similarity=0.180 Sum_probs=42.4
Q ss_pred EEEEEecCCCCCCCC--CCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEc
Q 007227 288 QVIIFGDMGKDEADG--SNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 288 rf~v~GD~g~~~~~~--~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~ 365 (612)
.+.++||+|.+...- -..+.+...-....+....+-...-|.+.|+||++...... ..+...++.+..++ ..+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~---~~a~~IlerLnGrk--hlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRE---RAAGLILERLNGRK--HLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchh---hHHHHHHHHcCCcE--EEe
Confidence 466788888765321 01111111101112222222234568999999999543332 23444455554444 789
Q ss_pred cCCCccC
Q 007227 366 SGNHERD 372 (612)
Q Consensus 366 ~GNHD~~ 372 (612)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999975
|
|
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.026 Score=58.51 Aligned_cols=67 Identities=21% Similarity=0.332 Sum_probs=39.6
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--------CCCCEEEEcCccccCCCcccHHHHHHHhhhccccC
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--------KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--------~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~ 359 (612)
+++++||+|.. ...++++++.. ...+.++++||++ +.|..+ .+..+.+..+...
T Consensus 3 ~iyaIGDIHG~---------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyV-DRGPdS--~eVld~L~~l~~~ 64 (304)
T cd07421 3 VVICVGDIHGY---------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYC-DRGPET--RKVIDFLISLPEK 64 (304)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcC-CCCCCH--HHHHHHHHHhhhc
Confidence 58999999854 23444444321 1356899999999 555432 2233332222221
Q ss_pred ---CCeEEccCCCccC
Q 007227 360 ---VPYMIASGNHERD 372 (612)
Q Consensus 360 ---vP~~~~~GNHD~~ 372 (612)
..++++.||||..
T Consensus 65 ~~~~~vv~LrGNHE~~ 80 (304)
T cd07421 65 HPKQRHVFLCGNHDFA 80 (304)
T ss_pred ccccceEEEecCChHH
Confidence 2468899999953
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.023 Score=46.55 Aligned_cols=74 Identities=16% Similarity=0.142 Sum_probs=43.0
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCC--CCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYG--INEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~--~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+|..+++... ..+++.|+|..... .....-.|+|....+.. ...... .++-.+.+++
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~-----~~~~~~---------------~~~~~~~~~i 60 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS-----DWQEVT---------------VPGNETSYTI 60 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSSTSSSESEEEEEEEETTSSS-----EEEEEE---------------EETTSSEEEE
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCCCCCeeEEEEEEEecccce-----eeeeee---------------eeeeeeeeee
Confidence 3555555332 67999999998741 11123456665443322 001111 0112336788
Q ss_pred cCCCCCCEEEEEEeeec
Q 007227 246 RELWPNAMYTYKLGHRL 262 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~ 262 (612)
++|+|++.|.++|....
T Consensus 61 ~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 61 TGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp ESCCTTSEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEEe
Confidence 99999999999998763
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.34 Score=48.91 Aligned_cols=88 Identities=16% Similarity=0.085 Sum_probs=49.4
Q ss_pred EEEEEeCC--EEEEEEcCCCCCC---C-------CHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCcc
Q 007227 408 WYSTDYGM--FRFCIADTEQDWR---E-------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFA 475 (612)
Q Consensus 408 yYsfd~G~--v~Fi~LDT~~~~~---~-------g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~ 475 (612)
+..++.++ +.|+.+.+..... . ...-.+-+++.+++.. .+...+|++.|-..-|.. . .
T Consensus 123 ~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~------~---p 192 (239)
T cd07381 123 PAILEVNGIKVAFLAYTYGTNGIPLAAGARPGGVNPLDLERIAADIAEAK-KKADIVIVSLHWGVEYSY------Y---P 192 (239)
T ss_pred cEEEEECCEEEEEEEEECCCCCCcCcccCCccccCccCHHHHHHHHHHHh-hcCCEEEEEecCcccCCC------C---C
Confidence 45567777 5556655432110 0 0111234555555543 347899999996531110 0 0
Q ss_pred chhhHHHHHHHHHhCCCeEEEecccccceee
Q 007227 476 EPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 476 ~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
... ...+...+.+.++|+++.||.|..+-.
T Consensus 193 ~~~-~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 193 TPE-QRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred CHH-HHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 111 345555566679999999999987643
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.026 Score=56.09 Aligned_cols=65 Identities=20% Similarity=0.281 Sum_probs=40.9
Q ss_pred EEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhcccc-CCCeEEcc
Q 007227 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYMIAS 366 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~-~vP~~~~~ 366 (612)
.++||+|.. ...+.++++.. ...|.++++||++. .|... .+..+.+..+.. ..+++.+.
T Consensus 1 ~~igDiHg~---------------~~~l~~~l~~~~~~~~d~li~lGD~vd-rg~~~--~~~l~~l~~~~~~~~~~~~l~ 62 (225)
T cd00144 1 YVIGDIHGC---------------LDDLLRLLEKIGFPPNDKLIFLGDYVD-RGPDS--VEVIDLLLALKILPDNVILLR 62 (225)
T ss_pred CEEeCCCCC---------------HHHHHHHHHHhCCCCCCEEEEECCEeC-CCCCc--HHHHHHHHHhcCCCCcEEEEc
Confidence 378999843 34556666653 36899999999994 44332 222222222211 45789999
Q ss_pred CCCccC
Q 007227 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 63 GNHe~~ 68 (225)
T cd00144 63 GNHEDM 68 (225)
T ss_pred cCchhh
Confidence 999975
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.13 Score=59.78 Aligned_cols=46 Identities=24% Similarity=0.335 Sum_probs=27.5
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecccccc
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNY 503 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Y 503 (612)
....-+|++.|..+ ..+. .....+. .... +.+ -+||++|.||.|..
T Consensus 217 ~gaDvII~LsH~G~--~~d~----~~~~aen----~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGI--SADP----YKAMAEN----SVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCc--CCCC----ccccccc----hhHH-HhcCCCCCEEEeCCCCcc
Confidence 45788999999875 2111 0011111 1112 334 47999999999985
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.028 Score=58.02 Aligned_cols=64 Identities=19% Similarity=0.318 Sum_probs=41.2
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+..++||+|.. ...+++++++. ...|-++++||++ +.|..+ .+-.+.+..+. -....
T Consensus 2 ~~YvIGDIHGc---------------~daL~~LL~~i~f~~~~D~l~~lGDlV-dRGP~s--levL~~l~~l~--~~~~~ 61 (279)
T TIGR00668 2 ATYLIGDLHGC---------------YDELQALLERVEFDPGQDTLWLTGDLV-ARGPGS--LEVLRYVKSLG--DAVRL 61 (279)
T ss_pred cEEEEEcccCC---------------HHHHHHHHHHhCcCCCCCEEEEeCCcc-CCCCCH--HHHHHHHHhcC--CCeEE
Confidence 46899999854 34567777664 2578999999999 445432 12233333221 13568
Q ss_pred ccCCCcc
Q 007227 365 ASGNHER 371 (612)
Q Consensus 365 ~~GNHD~ 371 (612)
+.||||.
T Consensus 62 VlGNHD~ 68 (279)
T TIGR00668 62 VLGNHDL 68 (279)
T ss_pred EEChhHH
Confidence 9999996
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.16 Score=58.74 Aligned_cols=46 Identities=30% Similarity=0.333 Sum_probs=27.6
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecccccc
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNY 503 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Y 503 (612)
.....+|++.|..+ ..+.. ....+. ... .+.+ -+||++|.||.|..
T Consensus 194 ~gaDvII~LsH~G~--~~d~~----~~~~en----~~~-~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGI--SADPY----QPGAEN----SAY-YLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCc--CCCcc----ccccch----HHH-HHhcCCCCCEEEcCCCCcc
Confidence 45788999999875 21110 111111 111 2344 48999999999985
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.11 Score=54.40 Aligned_cols=177 Identities=19% Similarity=0.281 Sum_probs=96.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCCCc--------ccHHH---HHHHhhh
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGY--------ISQWD---QFTAQIE 354 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~g~--------~~~wd---~f~~~i~ 354 (612)
+|++|-|++|..-. ....++..+-+. ..++|++|..||+---+.. ...+. .|++...
T Consensus 1 MrIaVqGCcHG~Ld-----------~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYs 69 (456)
T KOG2863|consen 1 MRIAVQGCCHGELD-----------NIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYS 69 (456)
T ss_pred CceeeecccchhHH-----------HHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhC
Confidence 47899999974311 012333333332 2479999999998742221 11222 3443332
Q ss_pred -ccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCC--CCceEE-----EEEeCCEEEEEEcCC--
Q 007227 355 -PIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTEN--RAKFWY-----STDYGMFRFCIADTE-- 424 (612)
Q Consensus 355 -~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~--~~~~yY-----sfd~G~v~Fi~LDT~-- 424 (612)
.+.+.+|.+++=||||... +. ..+|..+ ..+.|| ...+|+||+-.|+.-
T Consensus 70 ge~~APVlTIFIGGNHEAsn-----yL----------------~eLpyGGwVApNIyYlG~agVv~~~gvRIggiSGI~k 128 (456)
T KOG2863|consen 70 GEIKAPVLTIFIGGNHEASN-----YL----------------QELPYGGWVAPNIYYLGYAGVVNFGGVRIGGISGIYK 128 (456)
T ss_pred CcccCceeEEEecCchHHHH-----HH----------------HhcccCceeccceEEeeecceEEECCEEEeeccchhh
Confidence 2456789999999999631 11 1112111 123444 467899999888753
Q ss_pred -CCCCCC-----------------HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCC------C-cc----
Q 007227 425 -QDWREG-----------------TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEG------S-FA---- 475 (612)
Q Consensus 425 -~~~~~g-----------------~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~------~-~~---- 475 (612)
+++..| -.+++ ...|++. +.|--|++.|-=+ -+-. .|++.. . ++
T Consensus 129 ~~dy~kgh~E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP-~GI~-~yGd~~~LLr~KPFFrqeie 201 (456)
T KOG2863|consen 129 EHDYRKGHFEWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWP-RGIY-YYGDKKQLLRLKPFFRQEIE 201 (456)
T ss_pred hhhcccCCCCCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCC-cchh-hcCCHHHHHhcCcHHHHHHh
Confidence 343221 11111 1233332 4566788888632 1110 111100 0 11
Q ss_pred -chhhHHHHHHHHHhCCCeEEEeccccc
Q 007227 476 -EPMGRESLQKLWQKYKVDIAVFGHVHN 502 (612)
Q Consensus 476 -~~~~r~~l~~ll~k~~VdlvlsGH~H~ 502 (612)
..+|...++.||++.+...+|+.|.|.
T Consensus 202 ~~~LGSp~~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 202 EGKLGSPALEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred cCCcCChHHHHHHHHhCcchhhhhhHhh
Confidence 123456888999999999999999997
|
|
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.028 Score=56.92 Aligned_cols=173 Identities=23% Similarity=0.256 Sum_probs=94.3
Q ss_pred CEEEEcCccccCCCc-------ccHHHHHHHh----hhccccCCCeEEccCCCccCCCCC---CCCCCCC--C---CCCc
Q 007227 328 DIVFHIGDICYANGY-------ISQWDQFTAQ----IEPIASTVPYMIASGNHERDWPGT---GSFYGNM--D---SGGE 388 (612)
Q Consensus 328 dfvl~~GDi~Y~~g~-------~~~wd~f~~~----i~~l~~~vP~~~~~GNHD~~~~~~---~~~y~~~--d---sgge 388 (612)
==++..||++.+.|- ..++.+|... .-++...+|+|+-.||||.+-+.. -.+|... | ....
T Consensus 128 lGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr 207 (392)
T COG5555 128 LGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHR 207 (392)
T ss_pred eeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcC
Confidence 346677899965432 1223333211 234456799999999999873221 1122100 0 0000
Q ss_pred cccccccccccCC--CCCCceEEEEEeCCEEEEEEcCCCCC-CCC-HHHHHHHHHHHhhccCCCCCeEEEEEcccc-ccC
Q 007227 389 CGVLVENMFYVPT--ENRAKFWYSTDYGMFRFCIADTEQDW-REG-TEQYRFIEHCLASVDRQKQPWLIFLAHRVL-GYS 463 (612)
Q Consensus 389 ~g~~~~~~f~~P~--~~~~~~yYsfd~G~v~Fi~LDT~~~~-~~g-~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~-~ys 463 (612)
.++-+.. +.|. -+..+.-||+++|++|.+-+-+...- .++ ..-+-||+.+|..... +..-++++.|.-. .++
T Consensus 208 ~~vf~Kp--pvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aa-dgrpv~LfqhyGwdtfs 284 (392)
T COG5555 208 SDVFWKP--PVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAA-DGRPVYLFQHYGWDTFS 284 (392)
T ss_pred cCcccCC--CCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeecc-CCCceeehhhhCcccee
Confidence 0000110 1121 12234568999999988776543211 111 2236799999987543 3344788888632 234
Q ss_pred CCCCcc------CCCC-----ccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007227 464 SDLSYA------VEGS-----FAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 464 s~~~~~------~~~~-----~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
+..|.. +.|. ..++. |..|...++-|+|--.+.||.|.+.
T Consensus 285 teawdpAsrT~Dd~Gsgaphww~a~e-r~all~~lqGYNvvg~fhGhkhd~~ 335 (392)
T COG5555 285 TEAWDPASRTLDDTGSGAPHWWPAPE-RGALLFFLQGYNVVGTFHGHKHDFN 335 (392)
T ss_pred ccccCchhcccccCCCCCCCCCCCCC-cchHHHhhcCceeEEeccccccccc
Confidence 433321 1111 12233 7889999999999999999999863
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.078 Score=53.13 Aligned_cols=84 Identities=14% Similarity=0.236 Sum_probs=50.1
Q ss_pred eEEEEEecCCCCCCCCC---Ccc-cccccC-hHHHHHHHHHhcCCCCEEEEcCccccCCCc--ccHHHHHHHhhhccccC
Q 007227 287 QQVIIFGDMGKDEADGS---NEY-NNFQRG-SLNTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAST 359 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~---~~~-~~~~~~-s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~~~ 359 (612)
-+.++++|.|.+-...- ..+ -.+|.. ....+.++++. .+|+-++++||+-.+-+. ..+|+.....++.+..+
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 36899999998642100 000 011211 12344445554 689999999999987554 44555433333333332
Q ss_pred CCeEEccCCCccC
Q 007227 360 VPYMIASGNHERD 372 (612)
Q Consensus 360 vP~~~~~GNHD~~ 372 (612)
-++.+.||||-.
T Consensus 99 -evi~i~GNHD~~ 110 (235)
T COG1407 99 -EVIIIRGNHDNG 110 (235)
T ss_pred -cEEEEeccCCCc
Confidence 599999999975
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.072 Score=56.23 Aligned_cols=67 Identities=21% Similarity=0.182 Sum_probs=41.5
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCC---CCEEEEcCccccCCCcccHHHHHHHhhhccc--cCCCe
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPY 362 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~---pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~ 362 (612)
+++++||+|.. ...+.++++...- -+-.+++||++ ++|..+. +-+..+-.+. ..--+
T Consensus 52 ~~~vvGDiHG~---------------~~dL~~il~~~g~~~~~~~~lFLGDyV-DRG~~s~--Evl~ll~~lk~~~p~~v 113 (321)
T cd07420 52 QVTICGDLHGK---------------LDDLFLIFYKNGLPSPENPYVFNGDFV-DRGKRSI--EILIILFAFFLVYPNEV 113 (321)
T ss_pred CeEEEEeCCCC---------------HHHHHHHHHHcCCCCccceEEEecccc-CCCCCcH--HHHHHHHHHhhcCCCcE
Confidence 58999999753 4556777765322 25799999999 5564331 1222221111 12247
Q ss_pred EEccCCCccC
Q 007227 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~~~GNHD~~ 372 (612)
+.+.||||..
T Consensus 114 ~llRGNHE~~ 123 (321)
T cd07420 114 HLNRGNHEDH 123 (321)
T ss_pred EEecCchhhh
Confidence 8899999975
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.40 E-value=0.17 Score=53.12 Aligned_cols=67 Identities=19% Similarity=0.261 Sum_probs=41.3
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC--CCCEEEEcCccccCCCcccHHHHHHHhhhccccCC--CeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--PYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~--~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~v--P~~ 363 (612)
+++++||+|.. ...+.++++... ..+-++++||++ ++|..+ -+-+..+..+.-.. -++
T Consensus 44 ~i~ViGDIHG~---------------~~dL~~l~~~~g~~~~~~ylFLGDyV-DRG~~s--~Evi~lL~~lki~~p~~v~ 105 (305)
T cd07416 44 PVTVCGDIHGQ---------------FYDLLKLFEVGGSPANTRYLFLGDYV-DRGYFS--IECVLYLWALKILYPKTLF 105 (305)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHhcCCCCCceEEEECCcc-CCCCCh--HHHHHHHHHHHhhcCCCEE
Confidence 58999999853 344555665433 347899999999 556432 12222222222222 478
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.++||||..
T Consensus 106 lLRGNHE~~ 114 (305)
T cd07416 106 LLRGNHECR 114 (305)
T ss_pred EEeCCCcHH
Confidence 899999974
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.28 E-value=1.8 Score=52.13 Aligned_cols=130 Identities=15% Similarity=0.146 Sum_probs=72.5
Q ss_pred ceEEEEEEeeccc--ceEEEEEecCCCCcEEEEeccceec----cCCCCCCc-ceeeecCCCCcEEEEEEeCCCCCCCcc
Q 007227 126 KGSLKLQLINQRS--DFSFVLFTNGLLNPKVVAVSNKVTF----TNPNAPVY-PRLAQGKVWNEMTVTWTSGYGINEAEP 198 (612)
Q Consensus 126 ~~~~~~~l~n~r~--~~~f~~~~~~~~~p~~~a~s~~~~~----~~~~~P~~-~~La~~~~~~~m~V~W~T~~~~~~~~~ 198 (612)
......+|-+++. +|.|.+-..+..-+- -.|..|++ .-|.+|-+ +.| .-.+.++++|.|...........
T Consensus 571 ~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g--~sS~~i~V~Tlsd~PsaPP~Nl~l-ev~sStsVrVsW~pP~~~t~ng~ 647 (1381)
T KOG4221|consen 571 NNATEYTINGLEKYTEYSIRVVAYNSAGSG--VSSADITVRTLSDVPSAPPQNLSL-EVVSSTSVRVSWLPPPSETQNGQ 647 (1381)
T ss_pred cCccEEEeecCCCccceEEEEEEecCCCCC--CCCCceEEEeccCCCCCCCcceEE-EecCCCeEEEEccCCCcccccce
Confidence 4455566667664 788877664322100 01222222 24556655 666 44468999999998754332223
Q ss_pred EE----EEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEE
Q 007227 199 FV----EWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQ 274 (612)
Q Consensus 199 ~V----~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~ 274 (612)
.. +|+..+... ....++. .|....-.+.+|+|+|.|..||.....+|....|++..
T Consensus 648 itgYkIRy~~~~~~~----~~~~t~v----------------~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~ 707 (1381)
T KOG4221|consen 648 ITGYKIRYRKLSRED----EVNETVV----------------KGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVS 707 (1381)
T ss_pred EEEEEEEecccCccc----ccceeec----------------ccchhhhHhhcCCCCceEEEEEEEeccCCCCCccccee
Confidence 33 333222111 1111111 11112224688999999999998765567666788888
Q ss_pred EEcC
Q 007227 275 FKAS 278 (612)
Q Consensus 275 F~T~ 278 (612)
+.|+
T Consensus 708 aeT~ 711 (1381)
T KOG4221|consen 708 AETP 711 (1381)
T ss_pred ccCc
Confidence 8886
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.18 Score=54.25 Aligned_cols=67 Identities=19% Similarity=0.252 Sum_probs=41.4
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC--CC-CEEEEcCccccCCCcccHHHHHHHhhhccc--cCCCe
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NI-DIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPY 362 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~--~p-dfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~ 362 (612)
++.++||+|.. ...+.++++... .. +.++++||++ +.|..+. +.+..+..+. ..--+
T Consensus 67 ~i~VvGDIHG~---------------~~dL~~ll~~~g~~~~~~~ylFLGDyV-DRGp~Sl--Evl~lL~~lki~~p~~v 128 (377)
T cd07418 67 EVVVVGDVHGQ---------------LHDVLFLLEDAGFPDQNRFYVFNGDYV-DRGAWGL--ETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CEEEEEecCCC---------------HHHHHHHHHHhCCCCCCceEEEecccc-CCCCChH--HHHHHHHHHhhccCCeE
Confidence 58999999853 455666776532 22 3589999999 5564331 2222222221 22347
Q ss_pred EEccCCCccC
Q 007227 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~~~GNHD~~ 372 (612)
+.++||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8899999975
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.15 Score=56.08 Aligned_cols=54 Identities=13% Similarity=0.174 Sum_probs=36.8
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCC
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG 341 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g 341 (612)
..+||++..|.|.+...... .....+..+++.|+.- .++.|||+..||+...+.
T Consensus 12 ntirILVaTD~HlGY~EkD~---vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDA---VRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred cceEEEEeecCccccccCCc---ccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 35999999999986532111 1123456667666542 378999999999998763
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.89 E-value=1.1 Score=51.88 Aligned_cols=95 Identities=21% Similarity=0.304 Sum_probs=58.3
Q ss_pred CCCCCCc-ceeeec-CCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 165 NPNAPVY-PRLAQG-KVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~P~~-~~La~~-~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
|..+|.. .+|-+. ...+++++.|.-.+..+. ..-.|+|.+++... .+|.. . ..-.
T Consensus 439 ~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e-------~~~~~----------~----~t~~ 497 (996)
T KOG0196|consen 439 NQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDE-------RSYST----------L----KTKT 497 (996)
T ss_pred cccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeeccccc-------cceeE----------E----eccc
Confidence 3344443 333333 357999999987653110 12345555543211 11110 0 0123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
.+|+++||+|||.|-+||......|-..+|....|.|.+.
T Consensus 498 ~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 498 TTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 5789999999999999999875556666899999999885
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=92.58 E-value=0.34 Score=50.05 Aligned_cols=67 Identities=18% Similarity=0.215 Sum_probs=41.6
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhcc--ccCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP~~ 363 (612)
+++++||+|.. ...+.++++.. ...+-++++||++ +.|.... +....+..+ ...--++
T Consensus 29 ~i~vvGDiHG~---------------~~~l~~ll~~~~~~~~~~~vfLGD~V-DrG~~s~--e~l~~l~~lk~~~p~~v~ 90 (271)
T smart00156 29 PVTVCGDIHGQ---------------FDDLLRLFDLNGPPPDTNYVFLGDYV-DRGPFSI--EVILLLFALKILYPNRVV 90 (271)
T ss_pred CEEEEEeCcCC---------------HHHHHHHHHHcCCCCCceEEEeCCcc-CCCCChH--HHHHHHHHHHhcCCCCEE
Confidence 58999999743 34556666542 3467899999999 5564331 222222111 1223578
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.++||||..
T Consensus 91 llrGNHE~~ 99 (271)
T smart00156 91 LLRGNHESR 99 (271)
T ss_pred EEeccccHH
Confidence 999999985
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.3 Score=50.87 Aligned_cols=67 Identities=19% Similarity=0.235 Sum_probs=40.9
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccc--cCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~~ 363 (612)
.+.++||+|.. ...+.++++.. ...+-++++||++ ++|..+. +.+..+..+. ..-.++
T Consensus 43 ~i~vvGDIHG~---------------~~dL~~ll~~~~~~~~~~~lfLGDyV-DRG~~s~--evl~ll~~lk~~~p~~v~ 104 (285)
T cd07415 43 PVTVCGDIHGQ---------------FYDLLELFRVGGDPPDTNYLFLGDYV-DRGYYSV--ETFLLLLALKVRYPDRIT 104 (285)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHHcCCCCCCeEEEEeEEC-CCCcCHH--HHHHHHHHHhhcCCCcEE
Confidence 38999999743 34455565542 3356788999999 5564332 2222222221 233588
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.++||||..
T Consensus 105 llrGNHE~~ 113 (285)
T cd07415 105 LLRGNHESR 113 (285)
T ss_pred EEecccchH
Confidence 999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=91.84 E-value=1.3 Score=35.55 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=24.7
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEE
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQF 275 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F 275 (612)
-...+.+.+|.|++.|.++|.....++...|+....|
T Consensus 55 ~~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~~~~~ 91 (93)
T cd00063 55 SETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTV 91 (93)
T ss_pred cccEEEEccccCCCEEEEEEEEECCCccCCCcccccc
Confidence 3466778999999999999987533333344443344
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.37 Score=50.41 Aligned_cols=25 Identities=20% Similarity=0.361 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHhCCCeEEEeccccc
Q 007227 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (612)
Q Consensus 478 ~~r~~l~~ll~k~~VdlvlsGH~H~ 502 (612)
.|.+.++..+++++.++++=||.-.
T Consensus 220 fg~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 220 FGKDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred cCHHHHHHHHHHcCCeEEEECCccc
Confidence 3578999999999999999999854
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.48 Score=49.99 Aligned_cols=23 Identities=9% Similarity=0.403 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHhCCCeEEEeccc
Q 007227 478 MGRESLQKLWQKYKVDIAVFGHV 500 (612)
Q Consensus 478 ~~r~~l~~ll~k~~VdlvlsGH~ 500 (612)
.+.+.+...++++++++++=||.
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEech
Confidence 35789999999999999999997
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=91.05 E-value=12 Score=45.34 Aligned_cols=193 Identities=17% Similarity=0.104 Sum_probs=104.7
Q ss_pred EcccccccCCCcccEEEEEEecC-----CCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCccCCCcceEEeccCCCcccc
Q 007227 49 ASPSILGMKGQNSDWLTVEYNSP-----NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKS 123 (612)
Q Consensus 49 ~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 123 (612)
.+|.=|.-.|.....++|+|... +-..-.++=.|.|..... .+..--+....==+|.|.+.+-.+|
T Consensus 718 ~~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~-------~W~~~~v~~~d~~~~V~~~~st~~~-- 788 (1051)
T KOG3513|consen 718 VNPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADK-------EWKEVIVSNQDQPRYVVSNESTEPF-- 788 (1051)
T ss_pred cCCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCc-------ccceeEecccCCceEEEcCCCCCCc--
Confidence 34554544455668899999984 334455666777865441 0110001000113566666542223
Q ss_pred ccceEEEEEEeecccceEEEEEecCCCCcEEEEeccceeccCCCCCCcceeeecCCCCcEEEEEEeCCC--CCCCccEEE
Q 007227 124 TGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYG--INEAEPFVE 201 (612)
Q Consensus 124 ~g~~~~~~~l~n~r~~~~f~~~~~~~~~p~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~T~~~--~~~~~~~V~ 201 (612)
=.-.++++.+|.+-+=. ..++.+..|..= .-+.+|..+.+ ...+.++|.|.|....- .....-.|+
T Consensus 789 -tpyevKVqa~N~~GeGp--------~s~~~v~~S~Ed--~P~~ap~~~~~-~~~s~s~~~v~W~~~~~~nG~l~gY~v~ 856 (1051)
T KOG3513|consen 789 -TPYEVKVQAINDQGEGP--------ESQVTVGYSGED--EPPVAPTKLSA-KPLSSSEVNLSWKPPLWDNGKLTGYEVK 856 (1051)
T ss_pred -ceeEEEEEEecCCCCCC--------CCceEEEEcCCC--CCCCCCcccee-ecccCceEEEEecCcCccCCccceeEEE
Confidence 24568888999886422 123344444221 12456666665 66678999999943321 123445788
Q ss_pred EccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 202 WGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 202 yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
|....+... + ..... -.+-.-.+.|+||+|+|.|+..|..-...|...-|...+-+|.++|
T Consensus 857 Y~~~~~~~~-~-~~~~~-----------------i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~p 917 (1051)
T KOG3513|consen 857 YWKINEKEG-S-LSRVQ-----------------IAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKAP 917 (1051)
T ss_pred EEEcCCCcc-c-cccee-----------------ecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCCC
Confidence 876443320 0 11000 1134556789999999999999986543343333444444455444
|
|
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=91.02 E-value=0.52 Score=49.51 Aligned_cols=66 Identities=21% Similarity=0.259 Sum_probs=40.2
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccccC--CCeEE
Q 007227 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST--VPYMI 364 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~--vP~~~ 364 (612)
+.++||+|.. ...+.++++.. ...+-++++||++ ++|.... +....+..+.-. --++.
T Consensus 45 i~vvGDIHG~---------------~~~L~~l~~~~~~~~~~~~lfLGDyV-DRG~~s~--evl~ll~~lk~~~p~~v~l 106 (303)
T PTZ00239 45 VNVCGDIHGQ---------------FYDLQALFKEGGDIPNANYIFIGDFV-DRGYNSV--ETMEYLLCLKVKYPGNITL 106 (303)
T ss_pred EEEEEeCCCC---------------HHHHHHHHHhcCCCCCceEEEeeeEc-CCCCCHH--HHHHHHHHhhhcCCCcEEE
Confidence 8899999743 34556666542 2346789999999 5564332 222222222112 23789
Q ss_pred ccCCCccC
Q 007227 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
+.||||..
T Consensus 107 lrGNHE~~ 114 (303)
T PTZ00239 107 LRGNHESR 114 (303)
T ss_pred EecccchH
Confidence 99999974
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=90.94 E-value=2.1 Score=39.65 Aligned_cols=85 Identities=26% Similarity=0.337 Sum_probs=52.7
Q ss_pred HHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCce
Q 007227 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHG 560 (612)
Q Consensus 481 ~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~G 560 (612)
+.|.-|-++..||+.++||+|.++... .+|-.||--|++-.... . +........
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye------------------~eg~ffvnPGSaTGAfn-~-------~~t~~~~PS 150 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE------------------HEGKFFVNPGSATGAFN-V-------SDTDIIVPS 150 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE------------------eCCcEEeCCCcccCCCc-c-------cccCCCCCc
Confidence 467777778999999999999988763 24666776676532211 0 111124567
Q ss_pred EEEEEEecCCeEEEEEEECCCCcE-EEEEEEEe
Q 007227 561 FVKLTAFDHSNLLFEYKKSRDGKV-YDSFRISR 592 (612)
Q Consensus 561 y~~l~v~n~~~L~~~~~~~~dG~v-~D~f~i~k 592 (612)
|+.+++ .++.+..-.++--||+| +|.....|
T Consensus 151 FvLmDi-qg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 151 FVLMDI-QGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred eEEEEe-cCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 889988 55555443344556764 45555444
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=90.93 E-value=0.64 Score=50.98 Aligned_cols=78 Identities=18% Similarity=0.381 Sum_probs=50.8
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc-------CCCCEEEEcCccccCCC-c------------cc
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL-------KNIDIVFHIGDICYANG-Y------------IS 344 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~-------~~pdfvl~~GDi~Y~~g-~------------~~ 344 (612)
..+++++++|.|.+.. ++. ...+...++-. .+...++.+||++..-| + ..
T Consensus 224 e~v~v~~isDih~GSk----~F~------~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSK----EFL------EDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYE 293 (481)
T ss_pred cceEEEEEeeeecccH----HHH------HHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchH
Confidence 3588999999998642 321 11222233222 23479999999995322 1 23
Q ss_pred HHHHHHHhhhccccCCCeEEccCCCccC
Q 007227 345 QWDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 345 ~wd~f~~~i~~l~~~vP~~~~~GNHD~~ 372 (612)
|++++-+.+..+-..+-+++.|||||.-
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCcc
Confidence 5566666666667788899999999975
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.79 E-value=0.59 Score=49.36 Aligned_cols=25 Identities=8% Similarity=0.291 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHhCCCeEEEeccccc
Q 007227 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (612)
Q Consensus 478 ~~r~~l~~ll~k~~VdlvlsGH~H~ 502 (612)
.|.+.+...+++++.++++-||.-.
T Consensus 231 fg~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 231 FGPDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred eCHHHHHHHHHHcCCcEEEECCccc
Confidence 3578999999999999999999854
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.06 E-value=0.79 Score=48.44 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=22.1
Q ss_pred hhHHHHHHHHHhCCCeEEEeccccc
Q 007227 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (612)
Q Consensus 478 ~~r~~l~~ll~k~~VdlvlsGH~H~ 502 (612)
.|.+.++..+++++.++++=||.-.
T Consensus 229 FG~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 229 FSQEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCccc
Confidence 3578999999999999999999854
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=89.95 E-value=0.62 Score=48.71 Aligned_cols=25 Identities=16% Similarity=0.295 Sum_probs=21.7
Q ss_pred hhHHHHHHHHHhCCCeEEEeccccc
Q 007227 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (612)
Q Consensus 478 ~~r~~l~~ll~k~~VdlvlsGH~H~ 502 (612)
.|.+.++..++++++++++=||.-.
T Consensus 222 fg~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 222 FGEDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred cCHHHHHHHHHHcCCcEEEEcCccc
Confidence 3578999999999999999999843
|
|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=87.84 E-value=3.5 Score=46.29 Aligned_cols=93 Identities=23% Similarity=0.381 Sum_probs=60.8
Q ss_pred EEEEEec---CCCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCccCCCcceEEeccCCCccccccc---eEEEEE---Ee
Q 007227 64 LTVEYNS---PNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKSTGK---GSLKLQ---LI 134 (612)
Q Consensus 64 v~~~~~~---~~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~---~~~~~~---l~ 134 (612)
|+..|+- ..|+..||||||=-.-++. .-...|.|+... .+| ..|+ ..+.|. |.
T Consensus 22 v~C~Ytlt~~~~ps~~DWIGiFKVGw~s~----------------rdY~Tf~Wa~~p-~~~-~~~s~~~~~V~F~ayyLP 83 (546)
T PF07888_consen 22 VECHYTLTPGFHPSSKDWIGIFKVGWSST----------------RDYYTFVWAPVP-ENY-VEGSAVNCQVQFQAYYLP 83 (546)
T ss_pred eEEEEecCCCCCCCCCCeeEEeecCCCch----------------hheeeEEeeccC-ccc-cCCCccceEEEECcccCC
Confidence 7777775 2899999999996543222 345788888642 344 3443 467775 55
Q ss_pred ec-ccceEEEEEecCCCCcEEEEeccceeccCCCCCCcceeeecC
Q 007227 135 NQ-RSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGK 178 (612)
Q Consensus 135 n~-r~~~~f~~~~~~~~~p~~~a~s~~~~~~~~~~P~~~~La~~~ 178 (612)
+. -..|.|.+....- .+.+.|.++.|..|+ |+..-+++..
T Consensus 84 k~~~e~YqfcYv~~~g---~V~G~S~pFqf~~~~-p~eeLvtle~ 124 (546)
T PF07888_consen 84 KDDDEFYQFCYVDQKG---EVRGASTPFQFRAPK-PLEELVTLED 124 (546)
T ss_pred CCCCCeEEEEEECCCc---cEEEecCCcccCCCC-ccccceeecc
Confidence 43 3357887765432 388999999999765 6655555544
|
This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region []. |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=87.42 E-value=1.6 Score=44.38 Aligned_cols=64 Identities=17% Similarity=0.218 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeee
Q 007227 433 QYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 433 Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~ 507 (612)
+.+.+++++++++ .+..++||..|--.-|.. ...+. ...+...+.+.++|+|+.+|.|..|-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~---------~p~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN---------YPTPE-QRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC---------CCCHH-HHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4578888888874 678899999995421111 11122 4456666667899999999999987553
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.51 E-value=2.9 Score=47.00 Aligned_cols=56 Identities=21% Similarity=0.237 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-C-CCeE-EEecccccc
Q 007227 431 TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-Y-KVDI-AVFGHVHNY 503 (612)
Q Consensus 431 ~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~-~Vdl-vlsGH~H~Y 503 (612)
-.|.+|-.+.++. .+..-+|+++|.|. ... .. ++.+...+++ + ++++ ||-||.|..
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~--~~~-----------~e-~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPV--RDD-----------DE-WKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEeccccc--ccc-----------hh-hhhHHHHHhhhCCCCceEEECchhhhh
Confidence 3577887777765 56778999999996 211 11 2223333334 3 6788 999999983
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=84.27 E-value=2.4 Score=42.78 Aligned_cols=59 Identities=20% Similarity=0.184 Sum_probs=36.2
Q ss_pred HHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceee
Q 007227 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 437 L~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
+++.++++. .+...+|++.|--.-|.. . .... ...+...+.+.+||+++.||.|..+..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~------~---p~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQY------E---PTDE-QRELAHALIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCC------C---CCHH-HHHHHHHHHHcCCCEEEcCCCCcCCce
Confidence 444444442 357899999996541111 0 0111 234555555578999999999987744
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=82.30 E-value=8.4 Score=29.49 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=19.1
Q ss_pred EEEEEecCCCCCCEEEEEEeee
Q 007227 240 IHTGFLRELWPNAMYTYKLGHR 261 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~ 261 (612)
-+...+.+|+|++.|.++|...
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4678899999999999999764
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.41 E-value=3.1 Score=42.59 Aligned_cols=65 Identities=23% Similarity=0.436 Sum_probs=43.6
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCe--
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY-- 362 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~-- 362 (612)
.-.||+.++|.|.-..+ +++...-|+.+|+||.. +.|...+-..|-+.+- +.|+
T Consensus 60 ~~~r~VcisdtH~~~~~-------------------i~~~p~gDvlihagdfT-~~g~~~ev~~fn~~~g----slph~y 115 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD-------------------INDIPDGDVLIHAGDFT-NLGLPEEVIKFNEWLG----SLPHEY 115 (305)
T ss_pred CceEEEEecCcccccCc-------------------cccCCCCceEEeccCCc-cccCHHHHHhhhHHhc----cCccee
Confidence 34799999999864321 11346789999999999 5565544445554443 2343
Q ss_pred -EEccCCCccCC
Q 007227 363 -MIASGNHERDW 373 (612)
Q Consensus 363 -~~~~GNHD~~~ 373 (612)
+++.||||...
T Consensus 116 KIVIaGNHELtF 127 (305)
T KOG3947|consen 116 KIVIAGNHELTF 127 (305)
T ss_pred eEEEeeccceee
Confidence 68999999864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 612 | ||||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 2e-15 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 2e-15 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 2e-15 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 8e-15 |
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 612 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-102 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-101 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 8e-34 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 3e-23 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 4e-06 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 5e-05 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 7e-05 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 317 bits (812), Expect = e-102
Identities = 96/444 (21%), Positives = 161/444 (36%), Gaps = 55/444 (12%)
Query: 165 NPNAPVYPRLAQGKVW-NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGS 223
NAP + QG + ++WT+ Y A W + + +T+ +
Sbjct: 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYN 80
Query: 224 MCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283
+IH +++L + Y Y+LG ++ F P PG
Sbjct: 81 YTS-----------AFIHHCTIKDLEYDTKYYYRLGFGD------AKRQFWFVTPPKPGP 123
Query: 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI 343
D + GD+G+ S T Q+ V +GD+ Y+N +
Sbjct: 124 DVPYVFGLIGDIGQTHD------------SNTTLTHYEQNSAKGQAVLFMGDLSYSNRWP 171
Query: 344 ----SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYV 399
++WD + E + P++ +GNHE D Y + V N +
Sbjct: 172 NHDNNRWDTWGRFSERSVAYQPWIWTAGNHEID-------YAPDIGEYQPFVPFTNRYPT 224
Query: 400 PTENRA---KFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLA 456
P E WY+ + + + + + QY++ L V+R + PWLI L
Sbjct: 225 PHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLV 284
Query: 457 HRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICT- 515
H L S + Y E M R + + YKVDI GHVH+YER +
Sbjct: 285 HAPLYNSYEAHYME----GEAM-RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNI 339
Query: 516 NKEKHYYKGSLNGTIHIAAGGAGAS---LSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNL 572
K + ++I G G S S T Q ++S +R+ G + ++
Sbjct: 340 VNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHA 399
Query: 573 LFEYKKSRDGKVY--DSFRISRDY 594
F + +++DG DS + Y
Sbjct: 400 HFSWHRNQDGASVEADSLWLLNRY 423
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 312 bits (800), Expect = e-101
Identities = 97/444 (21%), Positives = 159/444 (35%), Gaps = 56/444 (12%)
Query: 165 NPNAPVYPRLAQGK-VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGS 223
NAP + QG V M ++W + V + + R G ++
Sbjct: 15 GYNAPQQVHITQGDLVGRAMIISWVTMD--EPGSSAVRYWSEKNGRKRIAKGKMS----- 67
Query: 224 MCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283
G+IH +R+L N Y Y++G R + + F P G
Sbjct: 68 -----TYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRN------TTRRFSFITPPQTGL 116
Query: 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI 343
D + GD+G+ S T K V +GD+ YA+ Y
Sbjct: 117 DVPYTFGLIGDLGQSFD------------SNTTLSHYELSPKKGQTVLFVGDLSYADRYP 164
Query: 344 S----QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYV 399
+ +WD + E + P++ +GNHE + + + E ++V
Sbjct: 165 NHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIE-------FAPEINETEPFKPFSYRYHV 217
Query: 400 PTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLA 456
P E + + FWYS + + + GT QY +++ L V R + PWLI L
Sbjct: 218 PYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLM 277
Query: 457 HRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNIC-T 515
H L S + + E M R + + KYKVD+ GHVH YER +
Sbjct: 278 HSPLYNSYNHHFME----GEAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKI 332
Query: 516 NKEKHYYKGSLNGTIHIAAGGAG---ASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNL 572
+ ++I G AG S Q +S +R+ G + ++
Sbjct: 333 TNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHA 392
Query: 573 LFEYKKSRDGKVY--DSFRISRDY 594
F + +++DG DS +
Sbjct: 393 HFSWNRNQDGVAVEADSVWFFNRH 416
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 8e-34
Identities = 52/328 (15%), Positives = 92/328 (28%), Gaps = 54/328 (16%)
Query: 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-Q 348
+ GD G + + + ++ L D + +GD Y G D +
Sbjct: 10 VAVGDWGGVPNAPFHTAR--EMANAKAIATTVKTL-GADFILSLGDNFYFTGVHDAKDKR 66
Query: 349 FTAQIE-----PIASTVPYMIASGNHE-RDWPGTGSFYGNMDSGGECGVLV-ENMFYVPT 401
F E P VP+ + +GNH+ Y + F +P
Sbjct: 67 FQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIPR 126
Query: 402 ENRAKFWYSTDYGMFRFCIAD-------TEQDWREGTEQYRFIEHCLASVDRQKQPWLIF 454
N + + D D ++ Q +I+ LA+ K+ +++
Sbjct: 127 SNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLV 183
Query: 455 LAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNIC 514
H + S A G + L L +KV + GH HN + +
Sbjct: 184 AGHYPV-----WSIAEHGP--THCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDE----- 231
Query: 515 TNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTT-------WSLYRDYDHGFVKLTAF 567
NG + +G L+ + GF +
Sbjct: 232 ------------NGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVE-I 278
Query: 568 DHSNLLFEYKKSRDGKVYDSFRISRDYR 595
+ Y GK ++ R R
Sbjct: 279 TPKEMSVTY-IEASGKSLFKTKLPRRAR 305
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 100 bits (249), Expect = 3e-23
Identities = 44/341 (12%), Positives = 98/341 (28%), Gaps = 71/341 (20%)
Query: 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICY---ANGYISQW 346
GD GKD Q + +Q I++ + + + G W
Sbjct: 7 ASLGDWGKD--------TKGQILNAKYFKQFIKNER-VTFIVSPGSNFIDGVKGLNDPAW 57
Query: 347 DQFTAQI---EPIASTVPYMIASGNHE--RDWPGTGSFYGNMDSGGECGVLVENMFYVPT 401
+ E +P+ G + ++ + +E
Sbjct: 58 KNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATN 117
Query: 402 ENR--------------------AKFWYSTDYGMFRFCIADT-----EQDWREGTE-QYR 435
+ + F DT +++ E +
Sbjct: 118 YPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWN 177
Query: 436 FIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIA 495
++ L+ + ++I + + + Y+ S L L + +VD+
Sbjct: 178 DLKSQLSVAKKIA-DFIIVVGDQPI-------YSSGYSRGSSYLAYYLLPLLKDAEVDLY 229
Query: 496 VFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYR 555
+ GH +N E I N HI G S + ++ + SL+
Sbjct: 230 ISGHDNNMEVI------------------EDNDMAHITCGSGSMS-QGKSGMKNSKSLFF 270
Query: 556 DYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRD 596
D GF ++ ++ ++ S+ G+V + +++ +
Sbjct: 271 SSDIGFCVHEL-SNNGIVTKFVSSKKGEVIYTHKLNIKKKK 310
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 3e-08
Identities = 26/213 (12%), Positives = 63/213 (29%), Gaps = 30/213 (14%)
Query: 313 SLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPI-ASTVPYMIASGNH 369
S T + D++ D++ GD+ NG + ++ ++ + + + GNH
Sbjct: 77 SDEITDAFLADVESKKTDVLIISGDLTN-NGEKTSHEELAKKLTQVEKNGTQVFVVPGNH 135
Query: 370 ERDWPGTGSFYGNMDSGGECGVLVENMFY--------VPTENRAKFWYSTD-YGMFRFCI 420
+ + P F + + + + + Y +
Sbjct: 136 DINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195
Query: 421 ADTEQ---------DWREGT---EQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSY 468
DT EG +I+ A + + L H + ++ +
Sbjct: 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVI-- 253
Query: 469 AVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVH 501
+ + + +D ++ GH+H
Sbjct: 254 ---QKGYTINYNQQVIDALTEGAMDFSLSGHIH 283
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 2e-07
Identities = 81/561 (14%), Positives = 152/561 (27%), Gaps = 167/561 (29%)
Query: 27 QPLSK---------IAIHKAVFALDDNAYIKASPSILGMKGQNSDWLT--------VEYN 69
Q +K + + +A+ L + I G+ G W+ V+
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNV----LIDGVLGSGKTWVALDVCLSYKVQCK 179
Query: 70 SPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPL--LCS--APIKFQYANYSS--PQYKS 123
W+ N + P V L L P +++SS
Sbjct: 180 MDFKIF--WL------NLKNCNSPET---VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 124 TGKGSLKLQLINQRSDFSFVLFTNGLL------NPKVVAVSN---KVTFTNPNAPVYPRL 174
+ + L+ L ++ + N LL N K N K+ T V L
Sbjct: 229 SIQAELRRLLKSKP-------YENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL 281
Query: 175 AQGKVWNEMTVTWTSGYGINEAEP-FVEW-GPKGGD-----RTYSPAGTLTFGRGSMCGA 227
+ + + +E + +++ + D T +P S+
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP---RRL---SIIAE 335
Query: 228 -----PARTVGWRDPGY-----IHTGFLRELWPNAMYTY--KLGHRLFNGTYIWSSEYQF 275
A W+ I L L P +L +F
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS--VFP----------- 382
Query: 276 KASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGD 335
++ P L +I+ D+ K + N + SL + + K I
Sbjct: 383 PSAHIPTI-LLS--LIWFDVIKSDVM--VVVNKLHKYSL-----VEKQPKESTISIP--S 430
Query: 336 ICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN 395
I Y+ ++E + ++ N + + +D
Sbjct: 431 I-----YLE----LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ---------- 471
Query: 396 MFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQY---RFIEHCLASVDRQKQPWL 452
Y +YS + + + + RF+E QK
Sbjct: 472 --Y---------FYS--HIGHHLKNIEHPERMTLFRMVFLDFRFLE--------QK---- 506
Query: 453 IFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQN 512
+ H ++ GS +LQ+L + YK I + YER+ +
Sbjct: 507 --IRH------DSTAWNASGSIL-----NTLQQL-KFYKPYICD--NDPKYERLVNAILD 550
Query: 513 ICTNKEKHYYKGSLNGTIHIA 533
E++ + IA
Sbjct: 551 FLPKIEENLICSKYTDLLRIA 571
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 4e-06
Identities = 29/207 (14%), Positives = 60/207 (28%), Gaps = 47/207 (22%)
Query: 312 GSLNTTRQL---IQDLK----NIDIVFHIGDICYANGYISQWDQFTAQIEPIAST--VPY 362
G+++ +L ++ L D + GD+ G + + + +EP A+
Sbjct: 45 GAVDADDRLGELLEQLNQSGLRPDAIVFTGDLA-DKGEPAAYRKLRGLVEPFAAQLGAEL 103
Query: 363 MIASGNH-ERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIA 421
+ GNH +R + + A R +
Sbjct: 104 VWVMGNHDDRA---------ELRKF----------LLDEAPSMAPLDRVCMIDGLRIIVL 144
Query: 422 DTEQDWRE----GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEP 477
DT Q ++ LA ++ L H + A
Sbjct: 145 DTSVPGHHHGEIRASQLGWLAEELA--TPAPDGTILALHHPPI--------PSVLDMAVT 194
Query: 478 MG---RESLQKLWQKYKVDIAVFGHVH 501
+ + +L ++ + V + GH+H
Sbjct: 195 VELRDQAALGRVLRGTDVRAILAGHLH 221
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 44.9 bits (105), Expect = 5e-05
Identities = 37/263 (14%), Positives = 71/263 (26%), Gaps = 65/263 (24%)
Query: 298 DEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEP 355
D + + RGS + R + + + V +GDI +G+ + D ++
Sbjct: 21 DGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDI--IDGHNRRRDASDRALDT 78
Query: 356 IAST-----VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYS 410
+ + V GNHE S + + + + Y
Sbjct: 79 VMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQ---RTGTDTGSDLIGDDIYAYE 135
Query: 411 -TDYGMFRFCIADT---------------------------------------------- 423
+ FRF + D
Sbjct: 136 FSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFV 195
Query: 424 EQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESL 483
+ + +Q ++++ L D +++ LIF V ++D L
Sbjct: 196 KFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAAD------PICLAWNHEAVL 249
Query: 484 QKLWQKYKVDIAVFGHVHNYERI 506
L V + GH H+ R
Sbjct: 250 SVLRSHQSVLCFIAGHDHDGGRC 272
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 7e-05
Identities = 33/218 (15%), Positives = 61/218 (27%), Gaps = 39/218 (17%)
Query: 292 FGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTA 351
F G+ + QL + D V GDI G ++
Sbjct: 11 FRSRGEKLYGFIDVNAANAD----VVSQLNALRERPDAVVVSGDIV-NCGRPEEYQVARQ 65
Query: 352 QIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYST 411
+ + P + GNH D Y ++ + + +
Sbjct: 66 ILGSL--NYPLYLIPGNH--DDKALFLEY------------LQPLCPQLGSDANNMRCAV 109
Query: 412 DYGMFRFCIADTEQDWRE----GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLS 467
D R D+ + E ++E L + +P IF+ H L
Sbjct: 110 DDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLF--EGGDKPATIFMHHPPL------- 160
Query: 468 YAVEGSFAEPMG---RESLQKLWQKYK-VDIAVFGHVH 501
+ + +P+ L L +++ + GH H
Sbjct: 161 -PLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNH 197
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 612 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.97 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.9 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.88 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.87 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.73 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.46 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.38 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.33 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.26 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.22 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.22 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.19 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.17 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.03 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.02 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 98.99 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 98.95 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.89 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.7 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.67 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.65 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.64 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.57 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.54 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.18 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.17 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.1 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.94 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.91 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 97.89 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 97.88 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 97.88 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 97.76 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 97.63 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 97.55 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 97.32 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.11 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.11 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 97.07 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 97.07 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 96.99 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.97 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 96.97 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 96.96 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 96.94 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 96.93 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.91 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 96.89 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 96.84 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 96.81 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.78 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 96.78 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.75 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 96.75 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 96.72 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 96.67 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 96.67 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 96.65 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 96.61 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 96.6 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 96.51 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 96.5 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 96.49 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.48 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.45 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 96.41 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.4 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 96.4 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 96.4 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.36 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.35 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 96.32 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 96.29 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 96.29 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 96.27 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 96.26 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 96.24 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.21 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.08 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.04 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 95.96 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 95.95 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 95.94 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 95.88 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 95.83 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 95.81 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 95.79 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 95.74 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 95.74 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 95.73 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 95.69 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 95.66 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 95.64 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 95.62 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 95.58 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 95.56 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 95.55 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.54 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.53 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 95.49 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 95.48 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 95.45 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.38 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 95.37 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 95.3 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 95.28 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 95.25 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 95.23 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 95.18 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.11 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 95.09 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 95.08 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 95.01 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 95.0 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 94.97 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 94.97 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 94.96 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 94.91 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 94.88 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 94.85 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 94.78 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.75 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 94.74 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 94.73 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 94.69 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 94.67 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 94.67 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 94.63 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 94.58 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 94.54 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 94.5 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 94.48 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 94.47 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 94.46 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 94.43 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 94.43 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 94.38 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.36 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 94.31 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 94.28 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 94.26 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 94.26 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 94.2 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 94.04 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 93.98 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 93.96 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 93.72 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 93.6 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 93.54 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 93.53 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 93.49 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 93.01 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 92.96 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 92.92 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 92.91 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 92.76 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 92.74 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 92.55 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 92.46 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 92.36 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 92.36 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 92.21 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 92.2 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 91.92 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 91.56 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 91.47 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 91.4 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 91.29 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 91.22 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 90.87 | |
| 2lfe_A | 138 | E3 ubiquitin-protein ligase HECW2; structural geno | 90.85 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 90.78 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 90.61 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 89.74 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 89.42 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 89.01 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 88.79 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 88.04 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 87.56 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 86.88 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 86.64 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 85.41 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 85.37 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 84.97 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 84.69 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 84.26 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 84.13 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 83.96 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 82.29 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 82.24 | |
| 2dtg_E | 897 | Insulin receptor; IR ectodomain, X-RAY crystallogr | 81.68 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 81.25 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 80.53 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 80.52 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 80.39 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-61 Score=527.12 Aligned_cols=386 Identities=25% Similarity=0.397 Sum_probs=308.7
Q ss_pred CCCCCCcceeeecCC-CCcEEEEEEeC-CCCCCCccEEEEccCCCCCccccCcc-eEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKV-WNEMTVTWTSG-YGINEAEPFVEWGPKGGDRTYSPAGT-LTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~-~~~m~V~W~T~-~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
++++|.|+||+++++ .++|+|+|+|. .. ++.+.|+|+++++.....+.++ .+|... -..++++|
T Consensus 21 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~~V~y~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 87 (426)
T 1xzw_A 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDK--AGANKVFYWSENSKSQKRAMGTVVTYKYY-----------NYTSAFIH 87 (426)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCC--TTTTEEEEEETTCCCCEEEECEEECCEET-----------TEECCEEE
T ss_pred CCCCCceEEEEECCCCCCeEEEEEEeCCCC--CCCCEEEEecCCCCCceEEEEEEEEEEec-----------CCcCCEEE
Confidence 567899999999988 49999999998 43 4678999998766544333322 234321 02468999
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHH
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLI 321 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~ 321 (612)
+|+|+||+|||+|+|||+++ .||+.++|+|+|.++....+||+++||+|... ....+++++.
T Consensus 88 ~v~l~gL~p~t~Y~Yrv~~g------~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~------------~~~~~l~~i~ 149 (426)
T 1xzw_A 88 HCTIKDLEYDTKYYYRLGFG------DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTH------------DSNTTLTHYE 149 (426)
T ss_dssp EEEECCCCTTCEEEEEECCG------GGCEEEEEECCCCCCTTCCEEEEEECSCTTBH------------HHHHHHHHHH
T ss_pred EEEECCCCCCCEEEEEECCC------CccceeEEECCCCCCCCCCeEEEEEEeCCCCC------------chHHHHHHHH
Confidence 99999999999999999862 47999999999988777789999999998642 1245677776
Q ss_pred HhcCCCCEEEEcCccccCCCc----ccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccccccc
Q 007227 322 QDLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMF 397 (612)
Q Consensus 322 ~~~~~pdfvl~~GDi~Y~~g~----~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f 397 (612)
++..+||||||+||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... . ...+....+..+|
T Consensus 150 ~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f 222 (426)
T 1xzw_A 150 QNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPD---I----GEYQPFVPFTNRY 222 (426)
T ss_dssp HCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGG---G----TBCSTTHHHHHHS
T ss_pred hCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCCc---c----ccccCChhheEEE
Confidence 643489999999999998765 4679999999999888999999999999864210 0 0011224567788
Q ss_pred ccCCC---CCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCc
Q 007227 398 YVPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSF 474 (612)
Q Consensus 398 ~~P~~---~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~ 474 (612)
.||.+ ...+.||+|++|+++||+|||+.++..+.+|++||+++|++++|++++|+||++|+|+ |++..++..++
T Consensus 223 ~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~-~~~~~~~~~~~-- 299 (426)
T 1xzw_A 223 PTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPL-YNSYEAHYMEG-- 299 (426)
T ss_dssp CCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT--
T ss_pred eCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCc-eeCCCcccCCC--
Confidence 88853 2357899999999999999999887778999999999999987778999999999999 87654332222
Q ss_pred cchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceecc--CCCccccCCCCCeEEEEECCCCCCCC---CCCCCCC
Q 007227 475 AEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTN--KEKHYYKGSLNGTIHIAAGGAGASLS---PFTTLQT 549 (612)
Q Consensus 475 ~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~--~~~~~y~~~~~g~vyiv~G~gG~~l~---~~~~~~~ 549 (612)
+.+ |+.|+++|.+++||++|+||+|.|||++|++++++.. +....| .+.+|++||++|+||+... .+..++|
T Consensus 300 -~~~-r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~-~~~~g~~yi~~G~gG~~~~~~~~~~~~~p 376 (426)
T 1xzw_A 300 -EAM-RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPV-SDESAPVYITIGDGGNSEGLASEMTQPQP 376 (426)
T ss_dssp -HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCE-ECTTSCEEEEECCSCCTTCCCCCBCSSCC
T ss_pred -HHH-HHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccc-cCCCccEEEEeCCCccccccccccCCCCC
Confidence 345 8999999999999999999999999999998876421 111122 2468999999999998642 4555788
Q ss_pred CceeeeeCCceEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEecC
Q 007227 550 TWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGK--VYDSFRISRDY 594 (612)
Q Consensus 550 ~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~--v~D~f~i~k~~ 594 (612)
+|++++...|||++|++.|+++|.++|+++.||+ |+|+|||.|++
T Consensus 377 ~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 377 SYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp TTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred CceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 9999999999999999999999999999999998 89999999975
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-60 Score=520.25 Aligned_cols=389 Identities=25% Similarity=0.387 Sum_probs=305.3
Q ss_pred CCCCCCcceeeecCC-CCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcc-eEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKV-WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGT-LTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~-~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
++++|.|+||+++++ .++|+|+|+|... ++.+.|+||++++....++.++ .+|...+ ..++++|+
T Consensus 15 ~~~~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~~ 81 (424)
T 2qfp_A 15 GYNAPQQVHITQGDLVGRAMIISWVTMDE--PGSSAVRYWSEKNGRKRIAKGKMSTYRFFN-----------YSSGFIHH 81 (424)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSS--CCCCCEEEEESSSCCCEEECCEEECCBCSS-----------CBCCEEEE
T ss_pred CCCCCceEEEEecCCCCCeEEEEEECCCC--CCCCEEEEEeCCCCCceEEEEEEEEEEecC-----------CCCCEEEE
Confidence 567899999999987 5999999999753 4678999998776554444333 3343210 24689999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHH
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ 322 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~ 322 (612)
|+|+||+|||+|+|||+.+ .||+.++|+|+|.++....+||+++||+|... ....+++++.+
T Consensus 82 v~l~gL~p~t~Y~Yrv~~~------~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~------------~~~~~l~~~~~ 143 (424)
T 2qfp_A 82 TTIRKLKYNTKYYYEVGLR------NTTRRFSFITPPQTGLDVPYTFGLIGDLGQSF------------DSNTTLSHYEL 143 (424)
T ss_dssp EEECSCCTTCEEEEEECCS------SSCEEEEEECCCCCCTTCCEEEEEECSCTTBH------------HHHHHHHHHHT
T ss_pred EEECCCCCCCEEEEEECCC------CccceEEEECCCCCCCCCCeEEEEEEeCCCCC------------ChHHHHHHHHh
Confidence 9999999999999999863 37899999999988777789999999998642 12345666655
Q ss_pred hcCCCCEEEEcCccccCCCc----ccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccc
Q 007227 323 DLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFY 398 (612)
Q Consensus 323 ~~~~pdfvl~~GDi~Y~~g~----~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~ 398 (612)
+..++|||||+||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... .. .......+..+|.
T Consensus 144 ~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~---~~----~~~~~~~~~~~f~ 216 (424)
T 2qfp_A 144 SPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE---IN----ETEPFKPFSYRYH 216 (424)
T ss_dssp CSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGG---GT----BCSTTHHHHHHCC
T ss_pred CCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCc---cc----ccccchhhhhhcc
Confidence 33489999999999998753 3579999999998888999999999999864210 00 0001134566788
Q ss_pred cCCC---CCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCcc
Q 007227 399 VPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFA 475 (612)
Q Consensus 399 ~P~~---~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~ 475 (612)
||.. ...+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+||++|+|+ |++...+..++
T Consensus 217 ~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~-~~~~~~~~~~~--- 292 (424)
T 2qfp_A 217 VPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPL-YNSYNHHFMEG--- 292 (424)
T ss_dssp CCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT---
T ss_pred CCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCc-eecCccccccc---
Confidence 8853 3457899999999999999999877667899999999999987777899999999999 77643221121
Q ss_pred chhhHHHHHHHHHhCCCeEEEecccccceeeecccCceecc--CCCccccCCCCCeEEEEECCCCCCCC---CCCCCCCC
Q 007227 476 EPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTN--KEKHYYKGSLNGTIHIAAGGAGASLS---PFTTLQTT 550 (612)
Q Consensus 476 ~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~--~~~~~y~~~~~g~vyiv~G~gG~~l~---~~~~~~~~ 550 (612)
..+ |+.|+++|.+++||++|+||+|.|+|++|+++..... .....+ .++++++||++|+||+... .+..++|+
T Consensus 293 ~~~-r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~-~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~ 370 (424)
T 2qfp_A 293 EAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPV-KDQSAPVYITIGDAGNYGVIDSNMIQPQPE 370 (424)
T ss_dssp HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCE-ECTTSCEEEEECCSCTTSCCCCCBCSSCCT
T ss_pred HHH-HHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccc-cCCCCcEEEEecCCCCccccCccCCCCCCC
Confidence 345 8899999999999999999999999999997654321 111112 2467999999999998642 35557889
Q ss_pred ceeeeeCCceEEEEEEecCCeEEEEEEECCCCcE--EEEEEEEecCCCc
Q 007227 551 WSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKV--YDSFRISRDYRDI 597 (612)
Q Consensus 551 ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~v--~D~f~i~k~~~~~ 597 (612)
|++++...|||++|++.|+++|.++|+++.||++ .|+|+|.|++..-
T Consensus 371 ~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~~~~ 419 (424)
T 2qfp_A 371 YSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYP 419 (424)
T ss_dssp TEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTTTCC
T ss_pred cceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEeccccc
Confidence 9999999999999999999999999999999997 5999999986554
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=322.70 Aligned_cols=377 Identities=17% Similarity=0.221 Sum_probs=235.2
Q ss_pred CCcceeeecCC-CCcEEEEEEeCCCCC-------CCccEEEEccCCCCCc--cccCcceEEeccccCCCCCccccccCCC
Q 007227 169 PVYPRLAQGKV-WNEMTVTWTSGYGIN-------EAEPFVEWGPKGGDRT--YSPAGTLTFGRGSMCGAPARTVGWRDPG 238 (612)
Q Consensus 169 P~~~~La~~~~-~~~m~V~W~T~~~~~-------~~~~~V~yg~~~~~~~--~~~~~~~t~~~~~mc~~pa~~~g~~~~g 238 (612)
|...-++.|+. .+++ |.|+.-.+.. .....|+|....+..+ ....++.. .. .+.+
T Consensus 8 ~f~~GvasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~-a~-------------~~~~ 72 (527)
T 2yeq_A 8 PFTLGVASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEM-AK-------------PSLA 72 (527)
T ss_dssp SCTTCEEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEE-EC-------------GGGT
T ss_pred CccccccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEE-ec-------------CCCc
Confidence 44455667765 4555 7798863210 1234676765433322 22222221 10 1246
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCC-CceEEEEEecCCCCCCCCCCcccccccChHHHH
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQD-SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTT 317 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~-~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~ 317 (612)
++|+|.|+||+|||+|+|||+.. ..+|++++|+|+|.++.. ..+||+++||.+... +..+.+
T Consensus 73 ~t~~v~v~gL~P~t~Y~Yr~~~~-----~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~------------g~~~~~ 135 (527)
T 2yeq_A 73 HSVHVEADGLEPNKVYYYRFKTG-----HELSPVGKTKTLPAPGANVPQMTFAFASCQQYEH------------GYYTAY 135 (527)
T ss_dssp TEEEEEECSCCTTCEEEEEEEET-----TEECCCEEEECCCCTTCCCCCEEEEEECCCCGGG------------CCCHHH
T ss_pred eEEEeecCCcCCCCEEEEEEEeC-----CCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCC------------CccHHH
Confidence 89999999999999999999874 246899999999987653 579999999997531 112456
Q ss_pred HHHHHhcCCCCEEEEcCccccCCCcc------------------------cHHHHHH--HhhhccccCCCeEEccCCCcc
Q 007227 318 RQLIQDLKNIDIVFHIGDICYANGYI------------------------SQWDQFT--AQIEPIASTVPYMIASGNHER 371 (612)
Q Consensus 318 ~~l~~~~~~pdfvl~~GDi~Y~~g~~------------------------~~wd~f~--~~i~~l~~~vP~~~~~GNHD~ 371 (612)
..|.+ .++|||||+||++|+++.. ..|.+++ ..++.+.+.+|+|+++||||+
T Consensus 136 ~~ia~--~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~ 213 (527)
T 2yeq_A 136 KHMAK--EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEV 213 (527)
T ss_dssp HHHTT--SCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTT
T ss_pred HHHHh--cCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccc
Confidence 66665 6899999999999987532 1122222 235677788999999999999
Q ss_pred CCCCCCCCCCCCCCCCcc----cccccccc-ccCCC-------CCCceEEEEEeCC-EEEEEEcCCCCCC----------
Q 007227 372 DWPGTGSFYGNMDSGGEC----GVLVENMF-YVPTE-------NRAKFWYSTDYGM-FRFCIADTEQDWR---------- 428 (612)
Q Consensus 372 ~~~~~~~~y~~~dsgge~----g~~~~~~f-~~P~~-------~~~~~yYsfd~G~-v~Fi~LDT~~~~~---------- 428 (612)
..+..+.........+.. ...++.+| .||.. ...+.||+|++|+ ++||+|||+....
T Consensus 214 ~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~ 293 (527)
T 2yeq_A 214 ENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKP 293 (527)
T ss_dssp STTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEEC
T ss_pred cCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEecccccccccccccccc
Confidence 743211100000000000 01122333 35532 2357899999999 9999999976321
Q ss_pred ------------CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCcc------CCCCccchhhHHHHHHHHHhC
Q 007227 429 ------------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYA------VEGSFAEPMGRESLQKLWQKY 490 (612)
Q Consensus 429 ------------~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~------~~~~~~~~~~r~~l~~ll~k~ 490 (612)
.+.+|++||+++|++ ++++|+||+.|+|+ +......+ .+..-.-...|+.|+++|.++
T Consensus 294 ~~~~~~~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~-~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~ 369 (527)
T 2yeq_A 294 PSDESRNPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFF-AKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSK 369 (527)
T ss_dssp CCHHHHCTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCC-SCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHT
T ss_pred ccccccCCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcc-cccccCCCcccccCccchhccHHHHHHHHHHHHHh
Confidence 368999999999998 67899999999999 66532111 111000122389999999999
Q ss_pred CCe--EEEecccccceeeecccCceeccCCCccccCCCC----CeEEEEECC--CCC--CCCCC----CCCCCCceeeee
Q 007227 491 KVD--IAVFGHVHNYERICPIYQNICTNKEKHYYKGSLN----GTIHIAAGG--AGA--SLSPF----TTLQTTWSLYRD 556 (612)
Q Consensus 491 ~Vd--lvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~----g~vyiv~G~--gG~--~l~~~----~~~~~~ws~~~~ 556 (612)
+|+ ++|+||+|.+++.....+.. ++. ++-+++++. +|. .+... ...+| +..|.+
T Consensus 370 ~v~n~vvLsGDvH~~~~~~~~~~~~-----------~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np-~~~~~~ 437 (527)
T 2yeq_A 370 NLNNVVVLTGDVHASWASNLHVDFE-----------KTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENP-HIQFFN 437 (527)
T ss_dssp TCCCEEEEECSSSSEEEEEEESSTT-----------CTTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCT-TEEEEE
T ss_pred CCCCEEEEEcchHHHhHhhcccccc-----------CCCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCC-cceeee
Confidence 995 99999999999986321110 111 333332221 221 11100 01122 334555
Q ss_pred CCceEEEEEEecCCeEEEEEEE-----CCCCc--EEEEEEEEecCCC
Q 007227 557 YDHGFVKLTAFDHSNLLFEYKK-----SRDGK--VYDSFRISRDYRD 596 (612)
Q Consensus 557 ~~~Gy~~l~v~n~~~L~~~~~~-----~~dG~--v~D~f~i~k~~~~ 596 (612)
...||.+|++ +++.++++|+. +.++. ..-+|++....+-
T Consensus 438 ~~~Gy~~v~v-t~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~g~~~ 483 (527)
T 2yeq_A 438 DYRGYVRCTV-TPHQWKADYRVMPFVTEPGAAISTRASFVYQKDQTG 483 (527)
T ss_dssp BCEEEEEEEE-ETTEEEEEEEEESCSSSSCCCCEEEEEEEECSSTTC
T ss_pred CCCCEEEEEE-eccEEEEEEEEeCCccCCCCcceeeeEEEEeCCCcC
Confidence 7899999999 78999999885 22333 4455666554443
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=305.71 Aligned_cols=264 Identities=18% Similarity=0.264 Sum_probs=187.1
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCc----ccHHHHHHHh-hhcc--cc
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQ-IEPI--AS 358 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~----~~~wd~f~~~-i~~l--~~ 358 (612)
.+||+++||+|.+.. .|......+.+++++ .+|||||++||++|. |. ..+|.+.++. ++.. ..
T Consensus 3 ~l~f~~igD~g~g~~--------~q~~va~~m~~~~~~-~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~ 72 (342)
T 3tgh_A 3 QLRFASLGDWGKDTK--------GQILNAKYFKQFIKN-ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDM 72 (342)
T ss_dssp CEEEEECCSCBSCCH--------HHHHHHHHHHHHHHH-TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTT
T ss_pred eEEEEEEecCCCCCc--------hHHHHHHHHHHHHhh-cCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhh
Confidence 489999999997531 232233445555544 789999999999998 54 4556554443 3332 35
Q ss_pred CCCeEEccCCCccCCCCCC------CCCCCCCC----CCccccccccccccCCCCCCceEEEE----Ee---------C-
Q 007227 359 TVPYMIASGNHERDWPGTG------SFYGNMDS----GGECGVLVENMFYVPTENRAKFWYST----DY---------G- 414 (612)
Q Consensus 359 ~vP~~~~~GNHD~~~~~~~------~~y~~~ds----gge~g~~~~~~f~~P~~~~~~~yYsf----d~---------G- 414 (612)
.+|+++++||||+..+... ..|...+. -.........||.||. .||+| +. |
T Consensus 73 ~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~-----~yY~~~~~f~~~~~~~~~~~g~ 147 (342)
T 3tgh_A 73 YMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN-----YWYHYFTHFTVSSGPSIVKTGH 147 (342)
T ss_dssp CSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS-----SSEEEEEEEEEC---------C
T ss_pred CCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc-----ceEEEEEEeeccccccccccCC
Confidence 7999999999998642100 00100000 0000122346788884 36654 32 3
Q ss_pred ---CEEEEEEcCCCCCC----------CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHH
Q 007227 415 ---MFRFCIADTEQDWR----------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRE 481 (612)
Q Consensus 415 ---~v~Fi~LDT~~~~~----------~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~ 481 (612)
.++||+|||..... ...+|++||+++|+. ++|+||++|+|+ |+++.. +. ...+ ++
T Consensus 148 ~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~-~~~~~~-~~----~~~l-~~ 215 (342)
T 3tgh_A 148 KDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPI-YSSGYS-RG----SSYL-AY 215 (342)
T ss_dssp EEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCS-SCSSTT-CC----CHHH-HH
T ss_pred CCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCC-CCCCCC-CC----cHHH-HH
Confidence 39999999974321 125899999999943 479999999999 877532 11 1234 88
Q ss_pred HHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceE
Q 007227 482 SLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGF 561 (612)
Q Consensus 482 ~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy 561 (612)
.|++||.+|+||++|+||+|.|+|.++ +|++||++|+||...... ...++|+.++...+||
T Consensus 216 ~l~~ll~~~~VdlvlsGH~H~~~~~~~------------------~g~~~iv~Ga~g~~~~~~-~~~~~~s~f~~~~~Gf 276 (342)
T 3tgh_A 216 YLLPLLKDAEVDLYISGHDNNMEVIED------------------NDMAHITCGSGSMSQGKS-GMKNSKSLFFSSDIGF 276 (342)
T ss_dssp HTHHHHHHTTCCEEEECSSSSEEEEEE------------------TTEEEEEECCSSCCCCCC-SSCCTTEEEEECSSEE
T ss_pred HHHHHHHHcCCCEEEECCCcceeEEee------------------CCcEEEEeCccccccccC-CCCCCcceeecCCCcE
Confidence 999999999999999999999999963 468999999988765322 1346799999999999
Q ss_pred EEEEEecCCeEEEEEEECCCCcEEEEEEEEecCCC
Q 007227 562 VKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRD 596 (612)
Q Consensus 562 ~~l~v~n~~~L~~~~~~~~dG~v~D~f~i~k~~~~ 596 (612)
.++++ +++.|+++|+.+.+|+++|+|+|.|+.+-
T Consensus 277 ~~l~v-~~~~l~~~~~~~~~G~vld~~~i~k~~~~ 310 (342)
T 3tgh_A 277 CVHEL-SNNGIVTKFVSSKKGEVIYTHKLNIKKKK 310 (342)
T ss_dssp EEEEE-ETTEEEEEEEETTTTEEEEEEEEECCCCS
T ss_pred EEEEE-ECCEEEEEEEECCCCcEEEEEEEECCCCc
Confidence 99999 78899999996699999999999997663
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=265.34 Aligned_cols=264 Identities=17% Similarity=0.246 Sum_probs=176.1
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHH-HHHHhhhccc----c-C
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIA----S-T 359 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~----~-~ 359 (612)
.+||+++||+|......... ..+....+.+.+++++ .+|||||++||++|.+|....++ +|.+.++.+. . .
T Consensus 6 ~~~~~~isD~h~~~~~~~~~--~~~~~~~~~l~~~~~~-~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 82 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHT--AREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRN 82 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSC--HHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTT
T ss_pred ceEEEEEcccCCCCCccccC--chHHHHHHHHHHHHHh-cCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcC
Confidence 49999999999865321000 0011122334444443 58999999999998765432221 3334433322 2 7
Q ss_pred CCeEEccCCCccCCCCCCC-CCCCCCCCCccccccccccccCCCCCCceEEEEEe------CCEEEEEEcCCCC------
Q 007227 360 VPYMIASGNHERDWPGTGS-FYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDY------GMFRFCIADTEQD------ 426 (612)
Q Consensus 360 vP~~~~~GNHD~~~~~~~~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~------G~v~Fi~LDT~~~------ 426 (612)
+|+++++||||........ -| .....+|.+| ..||++++ |+++||+||+...
T Consensus 83 ~p~~~v~GNHD~~~~~~~~~~~----------~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~ 147 (313)
T 1ute_A 83 VPWHVLAGNHDHLGNVSAQIAY----------SKISKRWNFP-----SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDD 147 (313)
T ss_dssp CCEEECCCHHHHHSCHHHHHHG----------GGTSTTEECC-----SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGG
T ss_pred CCEEEECCCCccCCCccccccc----------cccCCCccCc-----ccceEEEEecCCCCceEEEEEEEChHHhCcCcc
Confidence 9999999999985311000 00 0012344454 34788888 5899999998641
Q ss_pred -----------CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEE
Q 007227 427 -----------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIA 495 (612)
Q Consensus 427 -----------~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlv 495 (612)
...+.+|++||+++|++. +.+|+|+++|+|+ ++.... + . ...+ ++.|.++|.+++|+++
T Consensus 148 ~~~~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~-~~~~~~-~---~-~~~~-~~~l~~~l~~~~v~~~ 217 (313)
T 1ute_A 148 FVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPV-WSIAEH-G---P-THCL-VKQLLPLLTTHKVTAY 217 (313)
T ss_dssp STTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCS-SCCSSS-C---C-CHHH-HHHTHHHHHHTTCSEE
T ss_pred ccccccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCC-ccCCCC-C---C-cHHH-HHHHHHHHHHcCCcEE
Confidence 112479999999999984 4589999999999 765431 1 1 1233 7889999999999999
Q ss_pred EecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCC---CCCCCceeeeeC----CceEEEEEEec
Q 007227 496 VFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFT---TLQTTWSLYRDY----DHGFVKLTAFD 568 (612)
Q Consensus 496 lsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~---~~~~~ws~~~~~----~~Gy~~l~v~n 568 (612)
|+||+|.+++..+ .+|+.||++|++|....... ....++..+... .+||.+|++ +
T Consensus 218 l~GH~H~~~~~~~-----------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v-~ 279 (313)
T 1ute_A 218 LCGHDHNLQYLQD-----------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-T 279 (313)
T ss_dssp EECSSSSEEEEEC-----------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-C
T ss_pred EECChhhhhhccC-----------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEE-E
Confidence 9999999998852 25788999999886432111 011234444332 389999999 7
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCCC
Q 007227 569 HSNLLFEYKKSRDGKVYDSFRISRDYRD 596 (612)
Q Consensus 569 ~~~L~~~~~~~~dG~v~D~f~i~k~~~~ 596 (612)
++.++++|+ +.+|+++|+|+|.|+.+.
T Consensus 280 ~~~~~~~~~-~~~g~~~~~~~l~~~~~~ 306 (313)
T 1ute_A 280 PKEMSVTYI-EASGKSLFKTKLPRRARS 306 (313)
T ss_dssp SSCEEEEEE-ETTSCEEEEEEECCCC--
T ss_pred cCEEEEEEE-cCCCcEEEEEEeccccCc
Confidence 789999998 569999999999987543
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-22 Score=208.74 Aligned_cols=250 Identities=15% Similarity=0.118 Sum_probs=161.8
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcccHHHHHHHhhhcccc-
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS- 358 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~- 358 (612)
...+||++++|+|...... ..+.. ......++++++. ..++|+||++||+++ .+....|+.+.+.++++..
T Consensus 23 ~~~~ri~~iSD~H~~~~~~-~~~~~--~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~~~l~~l~~~ 98 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDR-RLYGA--VDADDRLGELLEQLNQSGLRPDAIVFTGDLAD-KGEPAAYRKLRGLVEPFAAQ 98 (330)
T ss_dssp CCSEEEEEECCCCBCSSSC-CBTTT--BCHHHHHHHHHHHHHHHTCCCSEEEECSCCBT-TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCc-ccccc--cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCCHHHHHHHHHHHHHHHhh
Confidence 3459999999999865321 11111 1123344444443 258999999999994 4555667777777776633
Q ss_pred -CCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCC----CCCHHH
Q 007227 359 -TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW----REGTEQ 433 (612)
Q Consensus 359 -~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~----~~g~~Q 433 (612)
.+|+++++||||+.. .+...+.-........+|++++++++|++||+.... ....+|
T Consensus 99 ~~~pv~~v~GNHD~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q 160 (330)
T 3ib7_A 99 LGAELVWVMGNHDDRA------------------ELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQ 160 (330)
T ss_dssp HTCEEEECCCTTSCHH------------------HHHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHH
T ss_pred cCCCEEEeCCCCCCHH------------------HHHHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHH
Confidence 789999999999741 001111111112245678999999999999998632 246899
Q ss_pred HHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCce
Q 007227 434 YRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNI 513 (612)
Q Consensus 434 ~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~ 513 (612)
++||++.|+... ...+|++.|+|+ +....... +. .... .++.|.+++++++|+++|+||+|..+...
T Consensus 161 ~~wl~~~l~~~~---~~~~iv~~Hh~p-~~~~~~~~-~~-~~~~-~~~~l~~~l~~~~v~~v~~GH~H~~~~~~------ 227 (330)
T 3ib7_A 161 LGWLAEELATPA---PDGTILALHHPP-IPSVLDMA-VT-VELR-DQAALGRVLRGTDVRAILAGHLHYSTNAT------ 227 (330)
T ss_dssp HHHHHHHTTSCC---TTCEEEECSSCS-SCCSSGGG-GG-GSBS-CHHHHHHHHTTSSEEEEEECSSSSCEEEE------
T ss_pred HHHHHHHHHhcc---cCCeEEEEECCC-CCCCcccc-cc-cccc-CHHHHHHHHhccCceEEEECCCCCcccce------
Confidence 999999999852 233777788877 54421111 10 1111 26789999999999999999999987542
Q ss_pred eccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCc
Q 007227 514 CTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGK 583 (612)
Q Consensus 514 ~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~ 583 (612)
.+|..+++.|+.+...... .............||..|++ +++.+.++++.-..+.
T Consensus 228 ------------~~g~~~~~~gs~~~~~~~~--~~~g~~~~~~~~~gy~iv~i-~~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 228 ------------FVGIPVSVASATCYTQDLT--VAAGGTRGRDGAQGCNLVHV-YPDTVVHSVIPLGGGE 282 (330)
T ss_dssp ------------ETTEEEEECCCSSCEECTT--SCTTCCCEESCSCEEEEEEE-CSSCEEEEEEECSCCC
T ss_pred ------------ECCEEEEecCcceeccCCC--CCCcceeccCCCCceEEEEE-ECCCeEEEEeccCCCC
Confidence 1467777777766432111 01111222345689999999 6778999998644443
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-21 Score=197.03 Aligned_cols=243 Identities=11% Similarity=0.080 Sum_probs=154.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCe
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (612)
+||++++|+|...... ..+.. ......++++++. ..++|+||++||+++ .+....|+.+.+.++.+ .+|+
T Consensus 1 mri~~iSD~H~~~~~~-~~~g~--~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~~~l~~l--~~p~ 74 (274)
T 3d03_A 1 MLLAHISDTHFRSRGE-KLYGF--IDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSL--NYPL 74 (274)
T ss_dssp CEEEEECCCCBCSTTC-CBTTT--BCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS-SCCHHHHHHHHHHHTTC--SSCE
T ss_pred CEEEEEecCCcCCCCc-ccccc--cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCCHHHHHHHHHHHHhc--CCCE
Confidence 5899999999874321 11110 1122344444443 236899999999995 44455677777777665 6899
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCC-CceEEEEEeCCEEEEEEcCCCCC----CCCHHHHHHH
Q 007227 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR-AKFWYSTDYGMFRFCIADTEQDW----REGTEQYRFI 437 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~-~~~yYsfd~G~v~Fi~LDT~~~~----~~g~~Q~~WL 437 (612)
++++||||.... +. ..+...| ++.... +..+|+++.++++|++||+.... ....+|++||
T Consensus 75 ~~v~GNHD~~~~-----~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl 139 (274)
T 3d03_A 75 YLIPGNHDDKAL-----FL---------EYLQPLC-PQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWL 139 (274)
T ss_dssp EEECCTTSCHHH-----HH---------HHHGGGS-GGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHH
T ss_pred EEECCCCCCHHH-----HH---------HHhhhhh-cCcccCCCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHH
Confidence 999999997410 00 0001111 111111 24578999999999999997532 2468999999
Q ss_pred HHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhC-CCeEEEecccccceeeecccCceecc
Q 007227 438 EHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERICPIYQNICTN 516 (612)
Q Consensus 438 ~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~ 516 (612)
++.|++. +..++|++.|+|+ +....... +. .... .++.+.++++++ +|+++|+||+|.++...
T Consensus 140 ~~~l~~~---~~~~~iv~~H~p~-~~~~~~~~-~~-~~~~-~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--------- 203 (274)
T 3d03_A 140 EAQLFEG---GDKPATIFMHHPP-LPLGNAQM-DP-IACE-NGHRLLALVERFPSLTRIFCGHNHSLTMTQ--------- 203 (274)
T ss_dssp HHHHHHH---TTSCEEEEESSCS-SCCSCTTT-GG-GSBT-TTHHHHHHHHHCTTEEEEEECSSSSCEEEE---------
T ss_pred HHHHHhC---CCCCEEEEECCCC-cccCCccc-Cc-ccCc-CHHHHHHHHHhCCCceEEEeCCCCCchhhe---------
Confidence 9999984 3468999999998 65432111 10 1011 256899999998 89999999999987653
Q ss_pred CCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCc-eeeeeCCceEEEEEEecCCeEEEEEEEC
Q 007227 517 KEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTW-SLYRDYDHGFVKLTAFDHSNLLFEYKKS 579 (612)
Q Consensus 517 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~w-s~~~~~~~Gy~~l~v~n~~~L~~~~~~~ 579 (612)
.+|..++++++.+.... .. .+.+ +.+.....||..+++ ++..++++++.-
T Consensus 204 ---------~~g~~~~~~pg~~~~~~-~~--~~~~~~~~~~~~~gy~i~~i-~~~~~~~~~~~~ 254 (274)
T 3d03_A 204 ---------YRQALISTLPGTVHQVP-YC--HADTDPYYDLSPASCLMHRQ-VGEQWVSYQHSL 254 (274)
T ss_dssp ---------ETTEEEEECCCSSCBCC-CC--SSCCSCEEBCCCCEEEEEEE-ETTEEEEEEEEC
T ss_pred ---------ECCEEEEEcCCcceeec-cC--CCccccccccCCCceEEEEE-eCCcEEEEEEec
Confidence 13444555554332211 11 1112 234456789999999 666899888753
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-21 Score=198.84 Aligned_cols=250 Identities=16% Similarity=0.183 Sum_probs=150.9
Q ss_pred CceEEEEEecCCCCCCCCCCccc----ccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCc-----ccHHHHHHHhh
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYN----NFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGY-----ISQWDQFTAQI 353 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~----~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~-----~~~wd~f~~~i 353 (612)
..+||++++|+|.........+. .+.......++++++.. .+||+||++||+++.... ...|+.+.+.+
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l 83 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL 83 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHH
Confidence 35999999999987643211000 01111234445544432 689999999999964321 22333444444
Q ss_pred hccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEe-CCEEEEEEcCCCC------
Q 007227 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDY-GMFRFCIADTEQD------ 426 (612)
Q Consensus 354 ~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~-G~v~Fi~LDT~~~------ 426 (612)
+.+ .+|+++++||||...-....+.......... ........+|. .+..||+|+. ++++||+||+...
T Consensus 84 ~~~--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~ 158 (322)
T 2nxf_A 84 DAC--SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQR-TGTDTGSDLIG--DDIYAYEFSPAPNFRFVLLDAYDLSVIGRE 158 (322)
T ss_dssp HTT--CSEEEECCCHHHHHHCCHHHHHTSTTCCCC-------CEECGG--GTCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred Hhc--CCcEEEecCCCCcccCCHHHHhhhhCCcccc-cccccccccCC--CCceEEEEecCCCEEEEEEcCceecccccC
Confidence 432 6899999999998310000010000000000 00000011332 2456899998 9999999998642
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCC
Q 007227 427 ----------------------------------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDL 466 (612)
Q Consensus 427 ----------------------------------------~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~ 466 (612)
.....+|++||+++|++..+ +..++||++|+|+ +....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~iv~~H~p~-~~~~~ 236 (322)
T 2nxf_A 159 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPV-HPCAA 236 (322)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCC-CTTSS
T ss_pred CCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEEEEEccCC-CCCCC
Confidence 01238999999999998632 2457899999998 65432
Q ss_pred CccCCCCccchhhHHHHHHHHHhC-CCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCC
Q 007227 467 SYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFT 545 (612)
Q Consensus 467 ~~~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~ 545 (612)
. .... .. .++.+.+++.++ +|+++|+||+|.+++... .+|+.|+++|+.-.
T Consensus 237 ~---~~~~-~~-~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-----------------~~g~~~i~~~~~~~------ 288 (322)
T 2nxf_A 237 D---PICL-AW-NHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-----------------SSGAQHITLEGVIE------ 288 (322)
T ss_dssp C---GGGS-CT-THHHHHHHHHTCTTEEEEEECSCTTCEEEEC-----------------TTSCEEEECCCGGG------
T ss_pred C---cccc-cc-CHHHHHHHHhcCCCeEEEEcCCcCCCCceec-----------------cCCceEEEecchhh------
Confidence 1 0001 11 267899999999 799999999999988741 24677777665411
Q ss_pred CCCCCceeeeeCCceEEEEEEecCCeEEEEEEE
Q 007227 546 TLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 546 ~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~ 578 (612)
......||..+++ ++..+.++.+.
T Consensus 289 --------~~~~~~~y~~v~~-~~~~~~~~~~~ 312 (322)
T 2nxf_A 289 --------TPPHSHAFATAYL-YEDRMVMKGRG 312 (322)
T ss_dssp --------CCTTSCEEEEEEE-CSSEEEEEEEE
T ss_pred --------CCCCCCcEEEEEE-ECCeEEEEecc
Confidence 0123578999998 67788887664
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-16 Score=172.39 Aligned_cols=216 Identities=13% Similarity=0.157 Sum_probs=126.5
Q ss_pred CCceEEEEEecCCCCCCCC---CCcccc---cc-----cChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHH
Q 007227 284 DSLQQVIIFGDMGKDEADG---SNEYNN---FQ-----RGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFT 350 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~---~~~~~~---~~-----~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~ 350 (612)
+..+||++++|+|.+.... ...+.. .. ......++++++. ..+||+||++||+++ .+....++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTN-NGEKTSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBS-SCCHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCC-CCCHHHHHHHH
Confidence 3459999999999863210 000000 00 0023344554443 257999999999995 34444566666
Q ss_pred Hhhhccc-cCCCeEEccCCCccCCCCCCCCCCCCCC--CCcc-ccccccccccCC-------CCCCceEEEEEeCCEEEE
Q 007227 351 AQIEPIA-STVPYMIASGNHERDWPGTGSFYGNMDS--GGEC-GVLVENMFYVPT-------ENRAKFWYSTDYGMFRFC 419 (612)
Q Consensus 351 ~~i~~l~-~~vP~~~~~GNHD~~~~~~~~~y~~~ds--gge~-g~~~~~~f~~P~-------~~~~~~yYsfd~G~v~Fi 419 (612)
+.++.+. ..+|+++++||||........ +..... .... ...+...|.-.. ......|+.+..++++|+
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i 194 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARK-FEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEE-EETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccc-cCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEE
Confidence 6666553 368999999999986421110 000000 0000 000111111000 001234555568899999
Q ss_pred EEcCCCC------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHH
Q 007227 420 IADTEQD------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLW 487 (612)
Q Consensus 420 ~LDT~~~------------~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll 487 (612)
+||+... .....+|++||++.|+.+.. +...+|++.|+|+ +....... +. .... .++.+.+++
T Consensus 195 ~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~-~~~~~~~~-~~-~~~~-~~~~l~~ll 269 (443)
T 2xmo_A 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNL-TDHNDVIQ-KG-YTIN-YNQQVIDAL 269 (443)
T ss_dssp ECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBS-SCSSCC---CC-SBCT-THHHHHHHH
T ss_pred EeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCC-cccccccc-cc-cccc-cHHHHHHHH
Confidence 9999742 12458999999999988642 2356899999998 55422111 11 1111 267899999
Q ss_pred HhCCCeEEEecccccceee
Q 007227 488 QKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 488 ~k~~VdlvlsGH~H~YeRt 506 (612)
++++|+++|+||+|..+..
T Consensus 270 ~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 270 TEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHTTCCEEEECSSCSCEEE
T ss_pred HHcCCeEEEECCcccCchh
Confidence 9999999999999997754
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.46 E-value=2e-12 Score=126.56 Aligned_cols=171 Identities=12% Similarity=0.103 Sum_probs=97.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+||+++||+|.+. ..++++++.. .++|+|+++||+++.......+.++++.++.+ .+|+++
T Consensus 6 mri~~iSD~H~~~---------------~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~~ 68 (228)
T 1uf3_A 6 RYILATSNPMGDL---------------EALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAY 68 (228)
T ss_dssp CEEEEEECCTTCH---------------HHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEE
T ss_pred EEEEEEeeccCCH---------------HHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEEE
Confidence 7999999999642 2233333322 38999999999995432344445566655543 579999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccccccccCCC-CCCceEEEEEeC-CEEEEEEcCCC--CCCCC--------HH
Q 007227 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE-NRAKFWYSTDYG-MFRFCIADTEQ--DWREG--------TE 432 (612)
Q Consensus 365 ~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~-~~~~~yYsfd~G-~v~Fi~LDT~~--~~~~g--------~~ 432 (612)
++||||.... .++. ..+......|.. ...+ ..+.++ ++.|+.++... .+... ..
T Consensus 69 v~GNHD~~~~---~~~~---------~~~~~~~~~~~~~~l~~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 134 (228)
T 1uf3_A 69 VPGPQDAPIW---EYLR---------EAANVELVHPEMRNVHE--TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAW 134 (228)
T ss_dssp ECCTTSCSHH---HHHH---------HHHHHHHHCTTEEECBT--SEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHH
T ss_pred ECCCCCchhH---HHHH---------hhhhhhccCcceEEccc--ceEeeCCCcEEecCCCCcCCCCccChhhcccchhh
Confidence 9999997410 0000 000000000100 0001 124556 78898887431 11111 22
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccc
Q 007227 433 QYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVH 501 (612)
Q Consensus 433 Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H 501 (612)
+.+|+++.|++. ...+.|++.|+|+ +..... ..+.+.+..+++++++|++++||+|
T Consensus 135 ~~~~~~~~l~~~---~~~~~il~~H~p~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 135 VAEYRLKALWEL---KDYPKIFLFHTMP-YHKGLN---------EQGSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp HHHHHHGGGGGS---CSCCEEEEESSCB-CBTTTB---------TTSBHHHHHHHHHHCCSEEEECCSS
T ss_pred hHHHHHHHHHhC---CCCCeEEEEccCc-ccCCcc---------ccCHHHHHHHHHHhCCCEEEEcccc
Confidence 334555556553 2246899999998 543110 1113467778888999999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.38 E-value=5.9e-12 Score=126.33 Aligned_cols=181 Identities=12% Similarity=0.122 Sum_probs=94.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccH----------------H----
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQ----------------W---- 346 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~----------------w---- 346 (612)
+||+++||+|.+.. .+..+.+.++. .++|+|+++||++.. +.... +
T Consensus 6 mri~~iSDlH~~~~------------~~~~~l~~~~~-~~~D~vi~~GDl~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~ 71 (260)
T 2yvt_A 6 RKVLAIKNFKERFD------------LLPKLKGVIAE-KQPDILVVVGNILKN-EALEKEYERAHLARREPNRKVIHENE 71 (260)
T ss_dssp CEEEEEECCTTCGG------------GHHHHHHHHHH-HCCSEEEEESCCCCC-HHHHHHHHHHHHTTCCCCTHHHHHHH
T ss_pred EEEEEEeecCCChH------------HHHHHHHHHHh-cCCCEEEECCCCCCc-cCcchhhhhhhhhhcccchhhhhHHH
Confidence 79999999997531 12222222222 589999999999943 32200 0
Q ss_pred ----HHHHHhhhcccc-CCCeEEccCCCccCCCCC-CCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEE
Q 007227 347 ----DQFTAQIEPIAS-TVPYMIASGNHERDWPGT-GSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420 (612)
Q Consensus 347 ----d~f~~~i~~l~~-~vP~~~~~GNHD~~~~~~-~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~ 420 (612)
+.+.+.++.+.. .+|+++++||||...... ...+. +.+. +.....+ .+. ..+++++++|+.
T Consensus 72 ~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~------~~~~-~~~~~~l-----~~~-~~~~~~~~~i~g 138 (260)
T 2yvt_A 72 HYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYE------AETA-YPNIRVL-----HEG-FAGWRGEFEVIG 138 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHHHHHHHHH------TTTT-CTTEEEC-----SSE-EEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhhhhHHHHhh------hccC-CcceEEe-----cCc-ceEEECCEEEEe
Confidence 122223333332 589999999999742000 00000 0000 0000000 011 136788999999
Q ss_pred EcCCCCC-CCCHHHHH----HHH----HHHhhccCCCCCeEEEEEccccccCC-CCCccCCCCccchhhHHHHHHHHHhC
Q 007227 421 ADTEQDW-REGTEQYR----FIE----HCLASVDRQKQPWLIFLAHRVLGYSS-DLSYAVEGSFAEPMGRESLQKLWQKY 490 (612)
Q Consensus 421 LDT~~~~-~~g~~Q~~----WL~----~~L~~~~r~~~~w~Iv~~H~P~~yss-~~~~~~~~~~~~~~~r~~l~~ll~k~ 490 (612)
++..... ....+|.. |+. +.|++. .....|++.|+|+ +.. ........ ...+.+.+..++.++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~~~~Il~~H~pp-~~~~~d~~~~~~---~~~~~~~l~~~~~~~ 211 (260)
T 2yvt_A 139 FGGLLTEHEFEEDFVLKYPRWYVEYILKFVNEL---KPRRLVTIFYTPP-IGEFVDRTPEDP---KHHGSAVVNTIIKSL 211 (260)
T ss_dssp ECSEEESSCCBSSSSCEEEHHHHHHHGGGGGGS---CCCEEEEEESSCC-SCSSTTCBTTBS---CCCSCHHHHHHHHHH
T ss_pred cCCCcCCCCcCHHHHhhcchhhHHHHHHHHHhc---CCCCEEEEECCCc-cccccccCcccc---cccCcHHHHHHHHHh
Confidence 9753210 01112221 433 333432 2235688899998 543 11100000 111245778888899
Q ss_pred CCeEEEecccc
Q 007227 491 KVDIAVFGHVH 501 (612)
Q Consensus 491 ~VdlvlsGH~H 501 (612)
+++++++||+|
T Consensus 212 ~~~~vl~GH~H 222 (260)
T 2yvt_A 212 NPEVAIVGHVG 222 (260)
T ss_dssp CCSEEEECSSC
T ss_pred CCCEEEECCcc
Confidence 99999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.33 E-value=5.3e-12 Score=132.38 Aligned_cols=256 Identities=12% Similarity=0.071 Sum_probs=126.0
Q ss_pred CceEEEEEecCCCCCC--CCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccH--HHHHHHhhhcccc
Q 007227 285 SLQQVIIFGDMGKDEA--DGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQ--WDQFTAQIEPIAS 358 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~--~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~--wd~f~~~i~~l~~ 358 (612)
..+||++++|+|.+.. .......+. ......++++++. ..++|+|+++||++++.+.... ...+.+.++.+..
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r~-~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~ 95 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDRR-EELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR 95 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEECH-HHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcChh-HHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 3499999999997621 000000000 0112345555443 2589999999993335554322 3345555555443
Q ss_pred CCCeEEccCCCccCCCCCCCCCCCCCCCCcccccccc--c--cccCCCCCCceEEEEEeCCEEEEEEcCCCCC-------
Q 007227 359 TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN--M--FYVPTENRAKFWYSTDYGMFRFCIADTEQDW------- 427 (612)
Q Consensus 359 ~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~--~--f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~------- 427 (612)
.+|+++++||||... . ..+ ..+.. . +.+..+......+.++.+++.|+.++.....
T Consensus 96 ~~pv~~i~GNHD~~~-~--~~~----------~~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~ 162 (336)
T 2q8u_A 96 TAPVVVLPGNHDWKG-L--KLF----------GNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNE 162 (336)
T ss_dssp HSCEEECCC-------C--HHH----------HHHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCS
T ss_pred cCCEEEECCCCCccc-c--ccH----------HHHHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhh
Confidence 389999999999853 1 000 00000 0 1111110000011222356888888643221
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeee
Q 007227 428 REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 428 ~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~ 507 (612)
....+|.+|+.+.|...-+....+.|++.|.|+ +..... ..+..... ..+...+.+.++|++++||.|..+...
T Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~-~~~~~~-~~~~~~~~----~~v~~~l~~~~~d~v~~GH~H~~~~~~ 236 (336)
T 2q8u_A 163 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGY-AGIEQGRE----IIINRALIPSVVDYAALGHIHSFREIQ 236 (336)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEE-TTCC---------CC----CEECGGGSCTTSSEEEEESCSSCEEEE
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCEEEEECccc-cCCCCC-CCccchhh----cccCHHHccccCCEEEEccccCceEeC
Confidence 112467899988886521023568999999998 543110 00000000 001112335689999999999987652
Q ss_pred cccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCcEEEE
Q 007227 508 PIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDS 587 (612)
Q Consensus 508 p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~v~D~ 587 (612)
. .+..+-.|+... ..++.. ...-||..|++.++....++++.-.. +.+-+
T Consensus 237 ---~----------------~~~i~y~GS~~~---------~s~~e~-~~~~~~~lv~i~~~~~~~v~~i~~~~-r~~~~ 286 (336)
T 2q8u_A 237 ---K----------------QPLTIYPGSLIR---------IDFGEE-ADEKGAVFVELKRGEPPRYERIDASP-LPLKT 286 (336)
T ss_dssp ---E----------------TTEEEECCCSSC---------CSGGGT-TCCCEEEEEEEETTSCCEEEEEECCC-CCEEE
T ss_pred ---C----------------CccEEECCCCcC---------CCcccc-CCCCEEEEEEEeCCCccEEEEEECCC-EEEEE
Confidence 0 111122443211 111110 12578999999544457888886544 66666
Q ss_pred EEE
Q 007227 588 FRI 590 (612)
Q Consensus 588 f~i 590 (612)
+.+
T Consensus 287 ~~~ 289 (336)
T 2q8u_A 287 LYY 289 (336)
T ss_dssp EEE
T ss_pred eec
Confidence 665
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.2e-10 Score=108.74 Aligned_cols=165 Identities=19% Similarity=0.242 Sum_probs=106.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC-CCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK-NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~-~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~ 365 (612)
+|++++||+|.. ...++++++... ++|+|+++||+.+. .++.+.. |++.+
T Consensus 7 m~i~~isD~H~~---------------~~~~~~~~~~~~~~~d~i~~~GD~~~~------------~l~~l~~--~~~~v 57 (176)
T 3ck2_A 7 QTIIVMSDSHGD---------------SLIVEEVRDRYVGKVDAVFHNGDSELR------------PDSPLWE--GIRVV 57 (176)
T ss_dssp EEEEEECCCTTC---------------HHHHHHHHHHHTTTSSEEEECSCCCSC------------TTCGGGT--TEEEC
T ss_pred cEEEEEecCCCC---------------HHHHHHHHHHhhcCCCEEEECCCCchH------------HHHhhhC--CeEEe
Confidence 799999999832 234555555433 79999999998421 2333332 89999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhcc
Q 007227 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~ 445 (612)
.||||... .+|. ...++
T Consensus 58 ~GNhD~~~------------------------~~p~------~~~~~--------------------------------- 74 (176)
T 3ck2_A 58 KGNMDFYA------------------------GYPE------RLVTE--------------------------------- 74 (176)
T ss_dssp CCTTCCST------------------------TCCS------EEEEE---------------------------------
T ss_pred cCcccchh------------------------cCCc------EEEEE---------------------------------
Confidence 99999641 0121 00010
Q ss_pred CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCC
Q 007227 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGS 525 (612)
Q Consensus 446 r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~ 525 (612)
-..++|++.|.|+ +... .+ .+.+..+++++++|++++||+|......
T Consensus 75 --~~~~~i~~~Hg~~-~~~~-----~~-------~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------ 121 (176)
T 3ck2_A 75 --LGSTKIIQTHGHL-FDIN-----FN-------FQKLDYWAQEEEAAICLYGHLHVPSAWL------------------ 121 (176)
T ss_dssp --ETTEEEEEECSGG-GTTT-----TC-------SHHHHHHHHHTTCSEEECCSSCCEEEEE------------------
T ss_pred --ECCeEEEEECCCc-cCCC-----CC-------HHHHHHHHHhcCCCEEEECCcCCCCcEE------------------
Confidence 0125788889887 5321 00 3467778888999999999999865321
Q ss_pred CCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCcEEEEEEE
Q 007227 526 LNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRI 590 (612)
Q Consensus 526 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~v~D~f~i 590 (612)
.+++.++-.|+.|..... ....+|..+++ ++..+.++++ .-+|+++.++++
T Consensus 122 ~~~~~~inpGs~~~~~~~------------~~~~~y~il~~-~~~~~~v~~~-~~~~~~~~~~~~ 172 (176)
T 3ck2_A 122 EGKILFLNPGSISQPRGT------------IRECLYARVEI-DDSYFKVDFL-TRDHEVYPGLSK 172 (176)
T ss_dssp ETTEEEEEECCSSSCCTT------------CCSCCEEEEEE-CSSEEEEEEE-CTTSCBCTTCCE
T ss_pred ECCEEEEECCCCCcCCCC------------CCCCeEEEEEE-cCCEEEEEEE-EECCEEcchhhc
Confidence 145677778876653210 11368999998 6678999987 567887775543
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.22 E-value=4.9e-10 Score=107.95 Aligned_cols=180 Identities=16% Similarity=0.227 Sum_probs=110.0
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+||+++||+|..... ....+.+.+++++ .++|+|+++||++. ...++.++.+ ..|++.++
T Consensus 11 m~i~~iSD~H~~~~~---------~~~~~~l~~~~~~-~~~d~ii~~GDl~~--------~~~~~~l~~~--~~~~~~v~ 70 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRC---------NSLPAKFKKLLVP-GKIQHILCTGNLCT--------KESYDYLKTL--AGDVHIVR 70 (192)
T ss_dssp CEEEEECCCCBTTTC---------SSCCHHHHTTCCT-TSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEECC
T ss_pred eEEEEEecCCCCccc---------hhHHHHHHHHhcc-CCCCEEEEcCCCCC--------HHHHHHHHhc--CCCEEEEc
Confidence 799999999975321 0111233443332 57999999999983 2233334433 25899999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccC
Q 007227 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDR 446 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r 446 (612)
||||... .+|. ...++.
T Consensus 71 GNhD~~~------------------------~lp~------~~~~~~--------------------------------- 87 (192)
T 1z2w_A 71 GDFDENL------------------------NYPE------QKVVTV--------------------------------- 87 (192)
T ss_dssp CTTCCCT------------------------TSCS------EEEEEE---------------------------------
T ss_pred CCcCccc------------------------cCCc------ceEEEE---------------------------------
Confidence 9999741 0121 111111
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCC
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSL 526 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~ 526 (612)
..++|++.|.++ +.. + . ..+.+..++++.++|++++||+|...... .
T Consensus 88 --~~~~i~l~Hg~~-~~~--~---~-------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------~ 134 (192)
T 1z2w_A 88 --GQFKIGLIHGHQ-VIP--W---G-------DMASLALLQRQFDVDILISGHTHKFEAFE------------------H 134 (192)
T ss_dssp --TTEEEEEECSCC-CCB--T---T-------CHHHHHHHHHHHSSSEEECCSSCCCEEEE------------------E
T ss_pred --CCEEEEEECCCc-CCC--C---C-------CHHHHHHHHHhcCCCEEEECCcCcCccEe------------------E
Confidence 235788888554 321 1 0 14567777778899999999999854321 1
Q ss_pred CCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEe
Q 007227 527 NGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGK-VYDSFRISR 592 (612)
Q Consensus 527 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~-v~D~f~i~k 592 (612)
+++.++-.|+.+....+ +. .....+|..+++ ++..+.++++.-..++ .+.++++.|
T Consensus 135 ~~~~~inpGS~~~~~~~-------~~--~~~~~~y~il~~-~~~~~~~~~~~~~~~~~~v~~~~~~~ 191 (192)
T 1z2w_A 135 ENKFYINPGSATGAYNA-------LE--TNIIPSFVLMDI-QASTVVTYVYQLIGDDVKVERIEYKK 191 (192)
T ss_dssp TTEEEEECCCTTCCCCS-------SC--SCCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCEEEEECCcccccCCC-------CC--cCCCCcEEEEEE-ECCEEEEEEEEccCCEEEEEEEEEcc
Confidence 46777777776553211 00 123578999998 5678999988655554 466666665
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.22 E-value=5.5e-11 Score=119.07 Aligned_cols=211 Identities=7% Similarity=-0.023 Sum_probs=108.8
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc-----C--CCCEEEEcCccccCCCcccHHHHHHHhhhccccC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL-----K--NIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~-----~--~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~ 359 (612)
+|++++||+|... ..++++++.. . ++|+|+++||++. .|... .+..+.++.+...
T Consensus 2 m~i~~isD~H~~~---------------~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~-~g~~~--~~~~~~l~~l~~~ 63 (252)
T 1nnw_A 2 VYVAVLANIAGNL---------------PALTAALSRIEEMREEGYEIEKYYILGNIVG-LFPYP--KEVIEVIKDLTKK 63 (252)
T ss_dssp CEEEEEECCTTCH---------------HHHHHHHHHHHHHHHTTCCEEEEEEESCSSS-SSSCH--HHHHHHHHHHHHH
T ss_pred cEEEEEeecCCCH---------------HHHHHHHHHHHhhhhccCCCCEEEEeCccCC-CCCCH--HHHHHHHHhhHhh
Confidence 5899999999531 1233333222 2 7999999999994 33221 2233344433323
Q ss_pred CCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCC--CCCCCCHHHHHHH
Q 007227 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTE--QDWREGTEQYRFI 437 (612)
Q Consensus 360 vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~--~~~~~g~~Q~~WL 437 (612)
.|+++++||||...... .. .++ .+..... ++..... .... .......+|++||
T Consensus 64 ~~~~~v~GNhD~~~~~~---~~------~~~-~~~~~~~------------~~~~~~~---~~~~~~~~~~l~~~~~~~L 118 (252)
T 1nnw_A 64 ENVKIIRGKYDQIIAMS---DP------HAT-DPGYIDK------------LELPGHV---KKALKFTWEKLGHEGREYL 118 (252)
T ss_dssp SCEEEECCHHHHHHHHS---CT------TCS-SSGGGGG------------SSCCHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred cCeeEEecchHHHhhcc---cc------ccC-Ccccccc------------hhhhHHH---HHHHHHHHHHCCHHHHHHH
Confidence 58999999999742100 00 000 0000000 0000000 0000 0001235788998
Q ss_pred HHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhC-CCeEEEecccccceeeecccCceecc
Q 007227 438 EHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERICPIYQNICTN 516 (612)
Q Consensus 438 ~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~ 516 (612)
++.............|++.|+++ +.....+. . .....+.+..++.++ +++++++||+|......
T Consensus 119 ~~lp~~~~~~~~~~~i~~~H~~p-~~~~~~~~----~-~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------- 183 (252)
T 1nnw_A 119 RDLPIYLVDKIGGNEVFGVYGSP-INPFDGEV----L-AEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------- 183 (252)
T ss_dssp HTSCSCEEEEETTEEEEEESSCS-SCTTTCCC----C-SSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE---------
T ss_pred HhCCceEEEeeCCcEEEEEcCCC-CCCccccc----C-CCCCHHHHHHHHhcCCCCCEEEECCccccceEe---------
Confidence 76433221111234677788776 33211000 0 111146788888888 99999999999855431
Q ss_pred CCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEE
Q 007227 517 KEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 517 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~ 577 (612)
.+++++|..|+.|..... +...+|..+++ ++..+.++.+
T Consensus 184 ---------~~~~~~in~Gs~~~~~~~------------~~~~~y~il~~-~~~~v~~~~v 222 (252)
T 1nnw_A 184 ---------TRYGRVVCPGSVGFPPGK------------EHKATFALVDV-DTLKPKFIEV 222 (252)
T ss_dssp ---------ETTEEEEEECCSSSCSSS------------SCCEEEEEEET-TTCCEEEEEE
T ss_pred ---------cCCeEEEECCCccCCCCC------------CCcceEEEEEC-CCCeEEEEEe
Confidence 146777888887654210 12357888876 4445554433
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.19 E-value=2.5e-10 Score=112.12 Aligned_cols=187 Identities=21% Similarity=0.308 Sum_probs=110.3
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEc
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~ 365 (612)
.+|++++||+|.+.... .+ ...+.+++++ .++|+|+++||++. .+.++.++.+ ..|++++
T Consensus 25 ~m~i~~iSD~H~~~~~~-----~l----~~~l~~~~~~-~~~D~vi~~GDl~~--------~~~l~~l~~~--~~~v~~V 84 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAK-----EL----PSNFRELLAT-DKINYVLCTGNVCS--------QEYVEMLKNI--TKNVYIV 84 (215)
T ss_dssp CEEEEEECCCCTTTTCS-----SC----CGGGHHHHHC-TTCCEEEECSCCCC--------HHHHHHHHHH--CSCEEEC
T ss_pred CcEEEEEecCCCCCChH-----HH----HHHHHHHHhc-CCCCEEEECCCCCC--------HHHHHHHHHc--CCCEEEe
Confidence 37999999999753210 01 1234444442 67999999999983 2334444433 3589999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCcccccccccc--ccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhh
Q 007227 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMF--YVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f--~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~ 443 (612)
+||||..... + ...| .+|. .. .
T Consensus 85 ~GNHD~~~~~----~-------------~~~~~~~lp~------~~---------------------------------~ 108 (215)
T 2a22_A 85 SGDLDSAIFN----P-------------DPESNGVFPE------YV---------------------------------V 108 (215)
T ss_dssp CCTTCCSCCB----C-------------CGGGTBCCCS------EE---------------------------------E
T ss_pred cCCCcCcccc----c-------------ChhhHhhCCc------eE---------------------------------E
Confidence 9999975210 0 0000 0000 00 0
Q ss_pred ccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCcccc
Q 007227 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYK 523 (612)
Q Consensus 444 ~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~ 523 (612)
. ....++|++.|.++ +.. + . ..+.+..++++.++|++++||+|......
T Consensus 109 ~--~~~~~~i~l~Hg~~-~~~--~---~-------~~~~l~~~~~~~~~d~vl~GHtH~~~~~~---------------- 157 (215)
T 2a22_A 109 V--QIGEFKIGLMHGNQ-VLP--W---D-------DPGSLEQWQRRLDCDILVTGHTHKLRVFE---------------- 157 (215)
T ss_dssp E--EETTEEEEEECSTT-SSS--T---T-------CHHHHHHHHHHHTCSEEEECSSCCCEEEE----------------
T ss_pred E--ecCCeEEEEEcCCc-cCC--C---C-------CHHHHHHHHhhcCCCEEEECCcCCCccEe----------------
Confidence 0 01235788888554 321 1 0 14567777878899999999999854321
Q ss_pred CCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCc-EEEEEEEE
Q 007227 524 GSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGK-VYDSFRIS 591 (612)
Q Consensus 524 ~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~-v~D~f~i~ 591 (612)
.+++.++-.|+.|....+. . .....+|..+++ ++..+.++++.-.+|+ .+.+..+.
T Consensus 158 --~~~~~~inpGS~~~~~~~~-------~--~~~~~~y~il~i-~~~~i~~~~~~~~~~~~~v~~~~~~ 214 (215)
T 2a22_A 158 --KNGKLFLNPGTATGAFSAL-------T--PDAPPSFMLMAL-QGNKVVLYVYDLRDGKTNVAMSEFS 214 (215)
T ss_dssp --ETTEEEEECCCSSCCCCTT-------S--TTCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred --eCCEEEEECCcccccCCCC-------C--CCCCCcEEEEEE-eCCcEEEEEEEecCCeEEEEEEEee
Confidence 1466777777765532110 0 123568999998 5678999988755565 35555544
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=2.5e-10 Score=117.11 Aligned_cols=209 Identities=16% Similarity=0.132 Sum_probs=111.2
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
...+||+++||+|.... . + +..++|+||++||++. .|...+++.+.+.++.+. ..|++
T Consensus 57 ~~~mri~~iSD~H~~~~-----------~----l-----~i~~~D~vi~aGDl~~-~g~~~e~~~~~~~L~~l~-~~~v~ 114 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTD-----------G----I-----QMPYGDILLHTGDFTE-LGLPSEVKKFNDWLGNLP-YEYKI 114 (296)
T ss_dssp TTEEEEEEEBCCTTCCT-----------T----C-----CCCSCSEEEECSCCSS-SCCHHHHHHHHHHHHTSC-CSEEE
T ss_pred CCCeEEEEEeeCCCCcc-----------h----h-----ccCCCCEEEECCcccC-CCCHHHHHHHHHHHHhCC-CCeEE
Confidence 34599999999997531 0 1 2367999999999994 455555666666666542 24689
Q ss_pred EccCCCccCCCCCCCCCCCC--CCCCcc----ccc---cccccccCCCC--CCceEEEEEeCCEEEEEEcCCCCCCCC--
Q 007227 364 IASGNHERDWPGTGSFYGNM--DSGGEC----GVL---VENMFYVPTEN--RAKFWYSTDYGMFRFCIADTEQDWREG-- 430 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~--dsgge~----g~~---~~~~f~~P~~~--~~~~yYsfd~G~v~Fi~LDT~~~~~~g-- 430 (612)
+++||||+.... .++... ...... ... +...-.++.+. ... -+..+++++|+...-...+.+.
T Consensus 115 ~V~GNHD~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~--~~~~i~Gl~i~Gsp~tP~~~~~~f 190 (296)
T 3rl5_A 115 VIAGNHELTFDK--EFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQD--SEVTVKGFRIYGAPWTPWFNGWGF 190 (296)
T ss_dssp ECCCTTCGGGCH--HHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSS--EEEEETTEEEEEECCBCC--CCTT
T ss_pred EEcCCcccccch--hhhhhhhcccccccccccccccchhhhHhhhcCCeEEecC--CcEEECCEEEEEecCCCCCCCcCC
Confidence 999999985311 111000 000000 000 00000011100 001 1456788998884422111111
Q ss_pred -HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHH-HhCCCeEEEecccccceeeec
Q 007227 431 -TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLW-QKYKVDIAVFGHVHNYERICP 508 (612)
Q Consensus 431 -~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll-~k~~VdlvlsGH~H~YeRt~p 508 (612)
.++.+++.+.+... .....|++.|.|+ |...+..... ....+.+.|..++ ++++++++++||+|......
T Consensus 191 ~~~~~~~~~~~~~~i---p~~~dILvTH~PP-~g~~D~~~~~---~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~- 262 (296)
T 3rl5_A 191 NLPRGQSLLDKWNLI---PEGTDILMTHGPP-LGFRDWVPKE---LQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM- 262 (296)
T ss_dssp BCCTTHHHHHHHTTS---CTTCSEEEESSCB-TTSSCEEGGG---TEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE-
T ss_pred CcchHHHHHHHHhhC---CCCCeEEEECCCc-cccccccccc---cCcCChHHHHHHHHHhcCCCEEEECCccCCCceE-
Confidence 11222443333433 2345689999998 7653211000 1122345677766 68999999999999843221
Q ss_pred ccCceeccCCCccccCCCCCeEEEEECCCCCCCC
Q 007227 509 IYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLS 542 (612)
Q Consensus 509 ~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~ 542 (612)
..+++++|-.|+-|..++
T Consensus 263 ----------------~~g~t~vvNpGs~~~~~~ 280 (296)
T 3rl5_A 263 ----------------TDGYTTYINASTCTVSFQ 280 (296)
T ss_dssp ----------------ECSSCEEEECBCSCTTSC
T ss_pred ----------------EECCEEEEECCcCCcCcC
Confidence 014677777777766543
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=4.3e-09 Score=112.50 Aligned_cols=185 Identities=14% Similarity=0.091 Sum_probs=95.5
Q ss_pred CceEEEEEecCCCCCCCCCCcccc--cccChHHHHHHHHHh--cCCCCEEEEcCccccCCCc-ccHHHHHHHhhhcccc-
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPIAS- 358 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~-~~~wd~f~~~i~~l~~- 358 (612)
..+||++++|+|.+... +.. ........++++++. ..++|+||++||++..... ...+..+.+.++.+..
T Consensus 19 ~~mrilhiSD~Hlg~~~----~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~ 94 (386)
T 3av0_A 19 SHMMFVHIADNHLGYRQ----YNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHEN 94 (386)
T ss_dssp CCCEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEccCCCCccc----cCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 45999999999986421 100 000112345555543 2689999999999843321 2234456666666543
Q ss_pred CCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHH--
Q 007227 359 TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRF-- 436 (612)
Q Consensus 359 ~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~W-- 436 (612)
.+|+++++||||.......... . ..+...+..-.+ ..++..+-+++.|+.++...... ..+..+|
T Consensus 95 ~~pv~~v~GNHD~~~~~~~~~~--------~-~~l~~~v~~l~~---~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~ 161 (386)
T 3av0_A 95 NIKVYIVAGNHEMPRRLGEESP--------L-ALLKDYVKILDG---KDVINVNGEEIFICGTYYHKKSK-REEMLDKLK 161 (386)
T ss_dssp TCEEEECCCGGGSCSSTTSCCG--------G-GGGTTTCEECSE---EEEEEETTEEEEEEEECCCCSTT-HHHHHHHHH
T ss_pred CCcEEEEcCCCCCCccccccCH--------H-HHHHHHeEEcCC---CcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHH
Confidence 5899999999997532110000 0 000000111100 11221122458888888654321 1222333
Q ss_pred -HHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEeccccccee
Q 007227 437 -IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (612)
Q Consensus 437 -L~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeR 505 (612)
+...+. ...+.|++.|.|+ .... . +...... .. +. ++|++++||+|..++
T Consensus 162 ~l~~~~~-----~~~~~Ill~H~~~-~~~~---~--~~~~~~~--~~----l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 162 NFESEAK-----NYKKKILMLHQGI-NPYI---P--LDYELEH--FD----LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp HHHHHHH-----TCSSEEEEECCCC-TTTS---S--SSCSSCG--GG----SC--CCSEEEECSCCSCEE
T ss_pred Hhhhhcc-----cCCCEEEEECcCc-cccC---C--CCcccCH--HH----hh--hCCeEEccCCCCCcc
Confidence 333322 2346899999987 3211 1 1110111 11 11 399999999998743
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.02 E-value=6.9e-10 Score=118.39 Aligned_cols=198 Identities=13% Similarity=0.219 Sum_probs=101.7
Q ss_pred eEEEEEecCCCCCCCCCCcccc-cccChHHHHHHHHHh--cCCCCEEEEcCccccCCCc--ccHHHHHHHhhhccccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNN-FQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~-~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~~~vP 361 (612)
+||++++|+|.+.......+.. ........++++++. ..++|+||++||++++.+. ...+..+.+.++.+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 5899999999875310000000 001112344554432 2589999999999944332 2334455555555543389
Q ss_pred eEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCC----CCCceEEEEE--eC-CEEEEEEcCCCCC----CCC
Q 007227 362 YMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE----NRAKFWYSTD--YG-MFRFCIADTEQDW----REG 430 (612)
Q Consensus 362 ~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~----~~~~~yYsfd--~G-~v~Fi~LDT~~~~----~~g 430 (612)
+++++||||.... ..+. .-...++.+ ..... +.+. .| .+.|+.+.-.... ..+
T Consensus 81 v~~i~GNHD~~~~---~~~~------------~~~~~~~~~~~~~~~~~~-v~l~~~~G~~v~i~glp~~~~~~~~~~~~ 144 (379)
T 3tho_B 81 VVVLPGNQDWKGL---KLFG------------NFVTSISSDITFVMSFEP-VDVEAKRGQKVRILPFPYPDESEALRKNE 144 (379)
T ss_dssp EEECCCTTSCTTH---HHHH------------HHHHTTCSSEEECCSSCC-EEEECTTCCEEEEEEECCCCCC----CHH
T ss_pred EEEEcCCCccccC---cccc------------ccccccCCcceeecccce-EEEEcCCCCEEEEEECCCCCHHHHhhhhc
Confidence 9999999995310 0000 000001100 00011 1222 23 4777777543221 123
Q ss_pred HHHHHHHHHHHhhc---cCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceee
Q 007227 431 TEQYRFIEHCLASV---DRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 431 ~~Q~~WL~~~L~~~---~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
.++.+|+.+.|+.. ......+.|+++|.++ .........+.... ..+...+...++|+++.||.|..+..
T Consensus 145 ~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v-~g~~~~~~se~~~~-----~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 145 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGYAGIEQGRE-----IIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCB-SCCCC-------CS-----CCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred cchHHHHHHHHHHHHHHhcCCCCCeEEEEeccc-cCCccCCCCccccc-----cccCHHHcCcCCCEEEcccccCCeEe
Confidence 57789999988721 1124567899999987 32211001111000 01111222468999999999998654
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=98.99 E-value=2.9e-09 Score=106.48 Aligned_cols=151 Identities=17% Similarity=0.262 Sum_probs=85.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+|++++||+|.. ...+++++++..++|.|+++||++.. |... .+..+.+..+. +++.+.
T Consensus 4 mri~~isDiHg~---------------~~~l~~~l~~~~~~d~ii~~GDl~~~-g~~~--~~~~~~l~~~~---~~~~v~ 62 (246)
T 3rqz_A 4 MRILIISDVHAN---------------LVALEAVLSDAGRVDDIWSLGDIVGY-GPRP--RECVELVRVLA---PNISVI 62 (246)
T ss_dssp CCEEEECCCTTC---------------HHHHHHHHHHHCSCSEEEECSCCSSS-SSCH--HHHHHHHHHHC---SSEECC
T ss_pred cEEEEEeecCCC---------------HHHHHHHHHhccCCCEEEECCCcCCC-CCCH--HHHHHHHHhcC---CCEEEe
Confidence 799999999842 23456666665589999999999943 3221 23333443332 258999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccC
Q 007227 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDR 446 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r 446 (612)
||||...... +.. ..+. ........|. ......++.+||++.......
T Consensus 63 GNhD~~~~~~---~~~------------~~~~-~~~~~~~~~~----------------~~~l~~~~~~~L~~lp~~~~~ 110 (246)
T 3rqz_A 63 GNHDWACIGR---LSL------------DEFN-PVARFASYWT----------------TMQLQAEHLQYLESLPNRMID 110 (246)
T ss_dssp CHHHHHHTCC---CCC------------C--C-GGGGCHHHHH----------------HHHCCHHHHHHHHHCCSEEEE
T ss_pred CchHHHHhcc---CCc------------cccC-HHHHHHHHHH----------------HHHcCHHHHHHHHhCCcEEEE
Confidence 9999752110 000 0000 0000000000 012346889999864433221
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccc
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
. .|++.|.++ .+... .... . ...+..+|.++++|++|+||+|.-
T Consensus 111 -~---~i~~~Hg~p-~~~~~-----~~~~-~--~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 111 -G---DWTVVHGSP-RHPIW-----EYIY-N--ARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp -T---TEEEESSCS-SSTTT-----CCCC-S--HHHHHHHGGGCCSSEEECCSSSSE
T ss_pred -C---CEEEEECCc-CCccc-----cccC-C--hHHHHHHHhccCCCEEEECCcCcc
Confidence 1 467778766 43210 1111 1 457788899999999999999974
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=8e-09 Score=105.04 Aligned_cols=216 Identities=15% Similarity=0.178 Sum_probs=114.0
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
..|++++||+|.+ ...+++++++. .++|.|+++||++.. |... .+..+.++.+ .|++
T Consensus 11 ~~~i~~iSDiHg~---------------~~~l~~vl~~~~~~~~D~ii~~GDlv~~-g~~~--~~~~~~l~~~---~~~~ 69 (270)
T 3qfm_A 11 MTKIALLSDIHGN---------------TTALEAVLADARQLGVDEYWLLGDILMP-GTGR--RRILDLLDQL---PITA 69 (270)
T ss_dssp CEEEEEECCCTTC---------------HHHHHHHHHHHHHTTCCEEEECSCCSSS-SSCS--HHHHHHHHTS---CEEE
T ss_pred ccEEEEEecCCCC---------------HHHHHHHHHHHHhcCCCEEEEcCCCCCC-CCCH--HHHHHHHHcc---CCEE
Confidence 3899999999853 22334444332 479999999999943 3221 3444555443 3789
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhh
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~ 443 (612)
++.||||...... .. +.++ +..|. ..+.+ . ...........+|++||++.-..
T Consensus 70 ~v~GNhD~~~~~~---~~-----~~~~------~~~~~----~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~~ 122 (270)
T 3qfm_A 70 RVLGNWEDSLWHG---VR-----KELD------STRPS----QRYLL----R-----QCQYVLEEISLEEIEVLHNQPLQ 122 (270)
T ss_dssp ECCCHHHHHHHHH---HT-----TCSC------TTSHH----HHHHH----H-----HHHHHHTTSCHHHHHHHHSCCSE
T ss_pred EEcCChHHHHHHh---hc-----cccC------CCcHH----HHHHH----H-----HHHHHHHHcCHHHHHHHHhCCCc
Confidence 9999999742100 00 0000 00000 00000 0 00000012357889998864333
Q ss_pred ccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCcccc
Q 007227 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYK 523 (612)
Q Consensus 444 ~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~ 523 (612)
....-....|++.|..+ .+. + . +.-..... .+.+..++.+.++|++|+||+|.-....
T Consensus 123 ~~~~~~g~~i~lvHg~p-~~~--~-~-~~~~~~~~-~~~l~~~~~~~~~d~~i~GHtH~~~~~~---------------- 180 (270)
T 3qfm_A 123 IHRQFGDLTVGISHHLP-DKN--W-G-RELIHTGK-QEEFDRLVTHPPCDIAVYGHIHQQLLRY---------------- 180 (270)
T ss_dssp EEEEETTEEEEEESSBT-TBS--S-S-STTSTTCC-HHHHHHTTTTTTCSEEECCSSCSEEEEE----------------
T ss_pred eEEEECCcEEEEEECCC-CCC--C-C-ceecCCCc-HHHHHHHhcccCCCEEEECCcCchHhee----------------
Confidence 21111235677778654 221 1 0 00000111 4577888888899999999999633221
Q ss_pred CCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEE
Q 007227 524 GSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 524 ~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~ 578 (612)
..++..+|-.|+.|.....-+ .. . .+..-.|+.+++.++..+.++|++
T Consensus 181 -~~~~~~~iNpGSvg~pr~~~~--~~--~--~~~~asyaild~~~~~~~~v~~~r 228 (270)
T 3qfm_A 181 -GTGGQLIVNPGSIGQPFFLDA--QL--R--KDLRAQYMILEFDDKGLVDMDFRR 228 (270)
T ss_dssp -CTTSCEEEEECCSSSCCCSST--TG--G--GCCCEEEEEEEEETTEEEEEEEEE
T ss_pred -ccCCEEEEECCCccCCCCCCc--cc--c--CCCCCEEEEEEecCCCceEEEEEE
Confidence 014677888999887642211 00 0 012457889998433335777764
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.89 E-value=3e-08 Score=95.40 Aligned_cols=61 Identities=21% Similarity=0.380 Sum_probs=42.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+|++++||+|.. ...++++++.. .++|+|+++||++.. +..+.++.+ ..|+++
T Consensus 26 m~i~~iSD~Hg~---------------~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~ 80 (190)
T 1s3l_A 26 MKIGIMSDTHDH---------------LPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIA 80 (190)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEE
T ss_pred eEEEEEeeCCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEE
Confidence 899999999832 12233433332 689999999999831 234444433 579999
Q ss_pred ccCCCccC
Q 007227 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
++||||..
T Consensus 81 V~GNhD~~ 88 (190)
T 1s3l_A 81 TYGNNDGE 88 (190)
T ss_dssp ECCTTCCC
T ss_pred EeCCCcch
Confidence 99999974
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.70 E-value=2e-08 Score=96.73 Aligned_cols=149 Identities=17% Similarity=0.240 Sum_probs=82.7
Q ss_pred eEEEEEecCCCCCCCCC--CcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 287 QQVIIFGDMGKDEADGS--NEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~--~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
+|++++||+|.+..... ..+..+ ....+.+.+.+++ ..++|+|+++||++.. + ..+....+.++.+ ..|++
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~-~--~~~~~~~~~l~~l--~~~~~ 75 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRF-KGFEIVILTNLLKVLKPEDTLYHLGDFTWH-F--NDKNEYLRIWKAL--PGRKI 75 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCC-TTHHHHHHHHHHTTCCTTCEEEECSCCBSC-S--CCTTSHHHHHHHS--SSEEE
T ss_pred cEEEEEeccccCCCccccccCCCCH-HHHHHHHHHHHHHhCCCCCEEEECCCCCCC-c--hhHHHHHHHHHHC--CCCEE
Confidence 68999999997542100 001010 1112223333332 2579999999999954 3 1222334444433 24899
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhh
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~ 443 (612)
.++||||.... .+... |-+ +. +..||+ +
T Consensus 76 ~v~GNhD~~~~-----------------~~~~~-----------~~~----------l~----------~~~~l~----~ 103 (195)
T 1xm7_A 76 LVMGNHDKDKE-----------------SLKEY-----------FDE----------IY----------DFYKII----E 103 (195)
T ss_dssp EECCTTCCCHH-----------------HHTTT-----------CSE----------EE----------SSEEEE----E
T ss_pred EEeCCCCCchh-----------------hhhhh-----------hhc----------hh----------HHHHHH----h
Confidence 99999997410 00000 100 00 111221 1
Q ss_pred ccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEeccccccee
Q 007227 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (612)
Q Consensus 444 ~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeR 505 (612)
. ..++|++.|.|+ +..... .+ ....+.+..++.++++|++|+||+|....
T Consensus 104 ~----~~~~i~~~H~~~-~~~~~~-----~~--~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 104 H----KGKRILLSHYPA-KDPITE-----RY--PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp E----TTEEEEEESSCS-SCSSCC-----SC--HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred c----CCcEEEEEccCC-cCCCcc-----cc--cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 1 235799999987 543211 11 12367888999999999999999998654
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.67 E-value=3.6e-07 Score=86.90 Aligned_cols=64 Identities=14% Similarity=0.163 Sum_probs=40.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+|++++||+|.... . ....+.++++. .++|+|+++||++.. +..+.++.+ ..|++.+.
T Consensus 23 mri~~iSD~Hg~~~-----~----~~l~~~l~~~~---~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~V~ 80 (178)
T 2kkn_A 23 KRFLLISDSHVPVR-----M----ASLPDEILNSL---KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYGVH 80 (178)
T ss_dssp EEEEEECCCCBTTT-----T----CCCCHHHHHGG---GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEECC
T ss_pred eEEEEEecccCCCC-----H----HHHHHHHHHHh---cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEE
Confidence 79999999994211 0 01112233322 579999999999841 233334333 26999999
Q ss_pred CCCccC
Q 007227 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 81 GNhD~~ 86 (178)
T 2kkn_A 81 GNMDYP 86 (178)
T ss_dssp CSSSCG
T ss_pred CCCCcH
Confidence 999963
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.65 E-value=7.1e-07 Score=96.16 Aligned_cols=87 Identities=11% Similarity=0.188 Sum_probs=53.6
Q ss_pred CCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCc-ccHHHHHHHhhhcc---
Q 007227 283 QDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPI--- 356 (612)
Q Consensus 283 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~-~~~wd~f~~~i~~l--- 356 (612)
....+||++++|+|.+....... ........++++++. ..+||+||++||++..... ......+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~---~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~ 105 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAV---RGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMG 105 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBC
T ss_pred CCCCEEEEEEeccCCCCcccccc---hhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhcc
Confidence 34569999999999875421110 011123344554432 2689999999999854332 22334444444432
Q ss_pred -------------------------------ccCCCeEEccCCCccC
Q 007227 357 -------------------------------ASTVPYMIASGNHERD 372 (612)
Q Consensus 357 -------------------------------~~~vP~~~~~GNHD~~ 372 (612)
...+|++++.||||..
T Consensus 106 ~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 106 DRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp SSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred CCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 2379999999999974
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.64 E-value=2.7e-07 Score=96.33 Aligned_cols=82 Identities=13% Similarity=0.248 Sum_probs=51.3
Q ss_pred eEEEEEecCCCCCCCCCCccccc--ccChHHHHHHHHHh--cCCCCEEEEcCccccCCC-cccHHHHHHHhhhcccc-CC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNF--QRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIAS-TV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~--~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g-~~~~wd~f~~~i~~l~~-~v 360 (612)
+||++++|+|.+... +... .......++++++. ..++|+|+++||+++... ....+..+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQ----FHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcc----cCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 589999999987421 1000 00111334444432 268999999999985432 22344556666666543 68
Q ss_pred CeEEccCCCccC
Q 007227 361 PYMIASGNHERD 372 (612)
Q Consensus 361 P~~~~~GNHD~~ 372 (612)
|+++++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999974
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.57 E-value=3e-06 Score=90.89 Aligned_cols=258 Identities=14% Similarity=0.149 Sum_probs=121.4
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcc-cHHHHHHHhhhc-----
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEP----- 355 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~-~~wd~f~~~i~~----- 355 (612)
...+||++++|+|.+....... ........++++++. ..++|+|+++||++...... .....+++.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~ 87 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 87 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEEcCCCCCcccccc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 3459999999999875421110 111123345554443 26899999999998543221 122233333322
Q ss_pred -------c----------------------ccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCc
Q 007227 356 -------I----------------------ASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAK 406 (612)
Q Consensus 356 -------l----------------------~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~ 406 (612)
+ ...+|++++.||||..... .+....+-..+.+. -..|.- ....++
T Consensus 88 ~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~--~~~s~~~lL~~~g~--v~l~g~-~~~~~~ 162 (417)
T 4fbw_A 88 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD--GRYSALDILQVTGL--VNYFGR-VPENDN 162 (417)
T ss_dssp CCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-------CCCHHHHHHHTTS--CEECCC-CC---C
T ss_pred CcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccc--ccccHHHHhccCCe--EEEeCC-cccCCc
Confidence 2 2379999999999974211 00000000000000 001100 000000
Q ss_pred e---EEEEEeCC--EEEEEEcCCCCCCCCHHH-HHHHHHHHhhc-cC---CCCCeEEEEEccccccCCCCCccCCCCccc
Q 007227 407 F---WYSTDYGM--FRFCIADTEQDWREGTEQ-YRFIEHCLASV-DR---QKQPWLIFLAHRVLGYSSDLSYAVEGSFAE 476 (612)
Q Consensus 407 ~---yYsfd~G~--v~Fi~LDT~~~~~~g~~Q-~~WL~~~L~~~-~r---~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~ 476 (612)
. -..+.-|. +.+..+.-.. .+. .+++.+..... .. ....+.|++.|... ... +.. .+.
T Consensus 163 i~~~pv~l~~g~~~valyG~~~~~-----d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~-~~~----~~~-~yi- 230 (417)
T 4fbw_A 163 IVVSPILLQKGFTKLALYGISNVR-----DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNH-SAH----TPT-SYL- 230 (417)
T ss_dssp EEECCEEEEETTEEEEEEEECCCC-----HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCS-SCS----SSS-SSC-
T ss_pred eeEEeEEEEecCceEEEEeccCCc-----hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCc-cCC----CCc-ccC-
Confidence 0 01233443 4445554322 121 13333222211 11 23567899999876 221 111 111
Q ss_pred hhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeee
Q 007227 477 PMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRD 556 (612)
Q Consensus 477 ~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~ 556 (612)
+ + -+...++|+++.||.|..+...-. + ..+++..+-.|+.... .+ +.-..
T Consensus 231 p---~----~l~~~~~DyvalGH~H~~~~~~~~-~-------------~~~g~~i~~PGS~~~~--s~-------~e~E~ 280 (417)
T 4fbw_A 231 P---E----SFIQDFYDFVLWGHEHECLIDGSY-N-------------PTQKFTVVQPGSTIAT--SL-------SPGET 280 (417)
T ss_dssp C---G----GGSCTTCSEEEEESCCSCEEEEEE-E-------------TTTTEEEEECCCSSCS--SC-------CHHHH
T ss_pred c---h----hHhhcCCCEEEecCccccceeccc-c-------------CCCCEEEEECCCCCcC--CC-------ccccC
Confidence 1 1 133568999999999997654210 0 1134443444443211 11 10012
Q ss_pred CCceEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEe
Q 007227 557 YDHGFVKLTAFDHSNLLFEYKKSRDGK--VYDSFRISR 592 (612)
Q Consensus 557 ~~~Gy~~l~v~n~~~L~~~~~~~~dG~--v~D~f~i~k 592 (612)
...||..|++ ++..+.++++.-..-. +..++.+..
T Consensus 281 ~~kg~~lvei-~~~~~~~e~i~l~~~Rpf~~~~v~L~~ 317 (417)
T 4fbw_A 281 APKHCGILNI-TGKDFHLEKIRLRTVRPFIMKDIILSE 317 (417)
T ss_dssp SCCEEEEEEE-ETTEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred CCCEEEEEEE-ECCEEEEEEEECCCcccEEEEEEEeec
Confidence 4679999999 5678999988644433 455554433
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=2e-06 Score=93.13 Aligned_cols=86 Identities=15% Similarity=0.212 Sum_probs=51.8
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcc-cHHHHHHHhhhc-----
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEP----- 355 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~-~~wd~f~~~i~~----- 355 (612)
...+||++++|+|.+....... ........++++++. ..+||+||++||++...... .....+++.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~ 150 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 150 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEecccCCCcccCcc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 4459999999999875421100 011123344555443 26899999999998543221 222233333322
Q ss_pred -------c----------------------ccCCCeEEccCCCccC
Q 007227 356 -------I----------------------ASTVPYMIASGNHERD 372 (612)
Q Consensus 356 -------l----------------------~~~vP~~~~~GNHD~~ 372 (612)
+ ...+|++++.||||..
T Consensus 151 ~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 151 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp CCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred CcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 2379999999999974
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.18 E-value=4.9e-06 Score=92.08 Aligned_cols=200 Identities=15% Similarity=0.072 Sum_probs=89.9
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChH-HHHHHHHHhc--CCC-CEEEEcCccccCCCcc--cHHHHHHHhhhccccC
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSL-NTTRQLIQDL--KNI-DIVFHIGDICYANGYI--SQWDQFTAQIEPIAST 359 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~-~~~~~l~~~~--~~p-dfvl~~GDi~Y~~g~~--~~wd~f~~~i~~l~~~ 359 (612)
.++|++++|+|....... ...+....+ ..++++.++. .++ ++++.+||++...... ...+...+.+..+ .
T Consensus 8 ~l~Il~~~D~H~~~~~~~--~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l--g 83 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNE--YGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV--G 83 (516)
T ss_dssp EEEEEEECCCTTCCSCCT--TSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH--T
T ss_pred EEEEEEecccccCccCCC--CCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc--C
Confidence 489999999997532100 000110011 1223332221 145 7999999998322110 1112233333333 2
Q ss_pred CCeEEccCCCccCCCCCCCCCCCCCCCCcccccccc-ccccCCCC--CCceEEEEEeCC--EEEEEEcCCCC--CC-C--
Q 007227 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN-MFYVPTEN--RAKFWYSTDYGM--FRFCIADTEQD--WR-E-- 429 (612)
Q Consensus 360 vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~-~f~~P~~~--~~~~yYsfd~G~--v~Fi~LDT~~~--~~-~-- 429 (612)
. -++++||||+++... .+... ..+.+.++.. .......+ ..+.|.-++.++ +.|+.+.+... +. +
T Consensus 84 ~-d~~~~GNHEfd~g~~--~l~~~--~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~ 158 (516)
T 1hp1_A 84 Y-DAMAIGNHEFDNPLT--VLRQQ--EKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEY 158 (516)
T ss_dssp C-CEEECCGGGGSSCHH--HHHHH--HHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCS
T ss_pred C-CEEeeccccccCCHH--HHHHH--HhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCc
Confidence 2 367899999974210 00000 0000001000 00000000 113455678887 55666655431 11 1
Q ss_pred --------C-HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEeccc
Q 007227 430 --------G-TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHV 500 (612)
Q Consensus 430 --------g-~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~ 500 (612)
. ..-.+|+++ |++. .+...+|++.|.|. ..... .+.. . .. ...+...+...+||++|+||.
T Consensus 159 ~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~-~~~~~-~~~~--~--~~-~~~la~~~~~~~iDlilgGHt 228 (516)
T 1hp1_A 159 FTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGH-YDNGE-HGSN--A--PG-DVEMARALPAGSLAMIVGGHS 228 (516)
T ss_dssp CTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCC-CGGGC-CTTS--C--CC-HHHHHHHSCTTSSSEEECCSS
T ss_pred cCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCc-cCCCc-cccc--C--ch-HHHHHHhCCCCceeEEECCCC
Confidence 0 112334333 4321 25678999999997 32211 1100 0 11 223433333456999999999
Q ss_pred ccce
Q 007227 501 HNYE 504 (612)
Q Consensus 501 H~Ye 504 (612)
|...
T Consensus 229 H~~~ 232 (516)
T 1hp1_A 229 QDPV 232 (516)
T ss_dssp CCBC
T ss_pred Cccc
Confidence 9854
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.17 E-value=1.2e-05 Score=89.80 Aligned_cols=189 Identities=14% Similarity=0.049 Sum_probs=90.4
Q ss_pred CceEEEEEecCCCCCCCCCCcccc--cc--cChHHHHHHHHHh--cCCCC-EEEEcCccccCCCccc--HHHHHHHhhhc
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNN--FQ--RGSLNTTRQLIQD--LKNID-IVFHIGDICYANGYIS--QWDQFTAQIEP 355 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~--~~--~~s~~~~~~l~~~--~~~pd-fvl~~GDi~Y~~g~~~--~wd~f~~~i~~ 355 (612)
..++|++++|+|..-... .|.. .. .+....+..++++ ..++| +++.+||++....... ......+.+..
T Consensus 28 ~~l~Il~~~D~H~~~~~~--~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPV--ELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHR 105 (552)
T ss_dssp CEEEEEEECCCTTCCSCE--EEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred eeEEEEEEcccccCcccc--cccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHh
Confidence 359999999999642110 0100 00 0122334444432 13577 8899999984321110 11122233332
Q ss_pred cccCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccccc-ccccCC----CCCCceEEEEEeCC--EEEEEEcCCCC--
Q 007227 356 IASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN-MFYVPT----ENRAKFWYSTDYGM--FRFCIADTEQD-- 426 (612)
Q Consensus 356 l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~-~f~~P~----~~~~~~yYsfd~G~--v~Fi~LDT~~~-- 426 (612)
+ . +-+.++||||+++... .+.... .+.+.++.. ...... ....+.|.-++.++ +.|+.+.+...
T Consensus 106 l--g-~d~~~lGNHEfd~g~~-~l~~~l---~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~ 178 (552)
T 2z1a_A 106 L--R-YRAMALGNHEFDLGPG-PLADFL---KGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTRE 178 (552)
T ss_dssp T--T-CCEEECCGGGGTTCHH-HHHHHH---TTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHH
T ss_pred c--C-CCccccccccccCCHH-HHHHHH---hhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhh
Confidence 2 1 2367899999974210 000000 001111110 000000 00123466778887 55666665421
Q ss_pred C-CC--------CHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEE
Q 007227 427 W-RE--------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAV 496 (612)
Q Consensus 427 ~-~~--------g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl 496 (612)
+ .+ ..++.+.+.+.|++ .+...+|++.|.|. .. + ..+.++ .+||++|
T Consensus 179 ~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~-~~-----------------d--~~la~~~~gvDlIl 235 (552)
T 2z1a_A 179 ISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGY-GE-----------------D--LKLARRLVGVQVIV 235 (552)
T ss_dssp HSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH-HH-----------------H--HHHHTTCSSCCEEE
T ss_pred ccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCc-ch-----------------H--HHHHHhCCCccEEE
Confidence 0 01 12333333444543 35667999999886 10 0 112233 5899999
Q ss_pred eccccccee
Q 007227 497 FGHVHNYER 505 (612)
Q Consensus 497 sGH~H~YeR 505 (612)
+||.|....
T Consensus 236 gGHtH~~~~ 244 (552)
T 2z1a_A 236 GGHSHTLLG 244 (552)
T ss_dssp ECSSCCCBS
T ss_pred eCCcCcccc
Confidence 999998653
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.10 E-value=0.00011 Score=81.57 Aligned_cols=205 Identities=12% Similarity=0.098 Sum_probs=91.2
Q ss_pred CceEEEEEecCCCCCCCCCCcccc---cccChHHHHHHHHHh--cCCCC-EEEEcCccccCCCcccH--------HHHHH
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNN---FQRGSLNTTRQLIQD--LKNID-IVFHIGDICYANGYISQ--------WDQFT 350 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~---~~~~s~~~~~~l~~~--~~~pd-fvl~~GDi~Y~~g~~~~--------wd~f~ 350 (612)
..++|++++|+|..-... .|.. -..+-+..+..++++ ..+++ +++.+||++.... ... .....
T Consensus 18 ~~l~Il~tnD~Hg~~~~~--~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~-~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPT--DFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSP-FCNYLIAHSGSSQPLV 94 (527)
T ss_dssp CEEEEEEECCCTTCCSSC--CSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSH-HHHHHHHTTCSSHHHH
T ss_pred CcEEEEEEeccCCCccCc--ccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcH-HHHHHhhcccCcchHH
Confidence 349999999999543110 0100 011223344444443 13455 7788999994321 111 12222
Q ss_pred HhhhccccCCCeEEccCCCccCCCCCC--CCCCCCCCCCccccccc-cccccCCC-CCCceEEEEEeCC--EEEEEEcCC
Q 007227 351 AQIEPIASTVPYMIASGNHERDWPGTG--SFYGNMDSGGECGVLVE-NMFYVPTE-NRAKFWYSTDYGM--FRFCIADTE 424 (612)
Q Consensus 351 ~~i~~l~~~vP~~~~~GNHD~~~~~~~--~~y~~~dsgge~g~~~~-~~f~~P~~-~~~~~yYsfd~G~--v~Fi~LDT~ 424 (612)
+.+..+ ... ++++||||+++.... .+++ +++.++. ........ ...+.|.-++.++ +-||.+.+.
T Consensus 95 ~~ln~l--g~D-~~t~GNHefd~G~~~l~~~~~------~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~ 165 (527)
T 3qfk_A 95 DFYNRM--AFD-FGTLGNHEFNYGLPYLKDTLR------RLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQ 165 (527)
T ss_dssp HHHHHT--CCC-EECCCGGGGTTCHHHHHHHHH------HCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECT
T ss_pred HHHHhc--CCc-EEeccccccccCHHHHHHHHH------hCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccC
Confidence 223222 233 567999998742100 0000 0000000 00000000 0012366678887 456666654
Q ss_pred CC--CCC-----C---HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeE
Q 007227 425 QD--WRE-----G---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDI 494 (612)
Q Consensus 425 ~~--~~~-----g---~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdl 494 (612)
.. +.. + ....+.+++.+++.. .+...+|++.|.+...........+....+.. ...|..-+ ..+||+
T Consensus 166 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~-~~~la~~~-~~giDl 242 (527)
T 3qfk_A 166 FIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE-GYAMLEAF-SKDIDI 242 (527)
T ss_dssp TGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC-HHHHHHHH-GGGCSE
T ss_pred CcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH-HHHHHHhc-CCCCcE
Confidence 31 111 0 122344444444432 35678999999875211100000000001111 11222222 258999
Q ss_pred EEecccccce
Q 007227 495 AVFGHVHNYE 504 (612)
Q Consensus 495 vlsGH~H~Ye 504 (612)
+|+||.|...
T Consensus 243 IlgGHtH~~~ 252 (527)
T 3qfk_A 243 FITGHQHRQI 252 (527)
T ss_dssp EECCSSCCEE
T ss_pred EEECCCCccc
Confidence 9999999854
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00017 Score=71.97 Aligned_cols=169 Identities=15% Similarity=0.213 Sum_probs=84.8
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccC-CCcccHHHHHHHhhhccccCCCeE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYA-NGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~-~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
+|++++||.=.. ++ ...+..++++. +. |+++..|..+.. .+.. ....+.+.. ..+-.+
T Consensus 1 m~ilfiGDi~g~------------~G-~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~---~~~~~~l~~--~G~D~~ 61 (252)
T 2z06_A 1 MRVLFIGDVMAE------------PG-LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD---RRSYRLLRE--AGVDLV 61 (252)
T ss_dssp CEEEEECCBCHH------------HH-HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC---HHHHHHHHH--HTCCEE
T ss_pred CEEEEEEecCCc------------cc-HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC---HHHHHHHHh--CCCCEE
Confidence 489999998211 11 22333333321 34 888888777632 2332 222222322 234444
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEc--CCCCCCCCHHHHHHHHHHH
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIAD--TEQDWREGTEQYRFIEHCL 441 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LD--T~~~~~~g~~Q~~WL~~~L 441 (612)
+.||||++....-.|.+..+ + -.--++|.....+.|.-++.++.++-+++ +......-..-.+-+++.+
T Consensus 62 -T~GNHefD~~~l~~~l~~~~-------~-vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v 132 (252)
T 2z06_A 62 -SLGNHAWDHKEVYALLESEP-------V-VRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLL 132 (252)
T ss_dssp -ECCTTTTSCTTHHHHHHHSS-------E-ECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHH
T ss_pred -EeccEeeECchHHHHhccCC-------c-eEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHH
Confidence 77999998531111111000 0 00012232223456777888886655544 3322111112233456666
Q ss_pred hhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccc
Q 007227 442 ASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 442 ~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
++. + .+.+|+.+|.-. .+ + .+.+. .+..-+||+++.||+|..
T Consensus 133 ~~l--k-~d~IIv~~H~g~--ts-----------e---k~~la-~~~dg~Vd~VvGgHTHv~ 174 (252)
T 2z06_A 133 EEE--K-ADYVLVEVHAEA--TS-----------E---KMALA-HYLDGRASAVLGTHTHVP 174 (252)
T ss_dssp HHC--C-CSEEEEEEECSC--HH-----------H---HHHHH-HHHBTTBSEEEEESSCSC
T ss_pred HHh--C-CCEEEEEeCCCc--HH-----------H---HHHHH-HhCCCCeEEEEcCCCCcC
Confidence 654 2 778999999431 10 1 12222 223457999999999984
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00017 Score=72.20 Aligned_cols=172 Identities=13% Similarity=0.076 Sum_probs=85.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCC-CcccHHHHHHHhhhccccCCCeE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
+|++++||.= +. ++ ...++.++++. +. |+++..|+.+... +... ...+.+.. ..+-.
T Consensus 1 m~ilf~GDv~-g~-----------~G-~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~---~~~~~l~~--~G~Da- 60 (255)
T 1t70_A 1 MRVLFIGDVF-GQ-----------PG-RRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR---DAARGALE--AGAGC- 60 (255)
T ss_dssp CEEEEECCBB-HH-----------HH-HHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH---HHHHHHHH--HTCSE-
T ss_pred CEEEEEeccC-Ch-----------HH-HHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH---HHHHHHHh--CCCCE-
Confidence 4899999982 11 11 23344444332 33 9999988887432 3321 22222222 13333
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccC-CCCCCceEEEEEeCCEE--EEEEcCCCCCCCCHHHHHHHHHH
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVP-TENRAKFWYSTDYGMFR--FCIADTEQDWREGTEQYRFIEHC 440 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P-~~~~~~~yYsfd~G~v~--Fi~LDT~~~~~~g~~Q~~WL~~~ 440 (612)
.+.||||++....-.+.+..+ . .+. .--++| ....++.|.-++.++.+ ++.|-+......-..-.+-+++.
T Consensus 61 ~TlGNHefD~~~l~~~l~~~~----~-~~~-~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~ 134 (255)
T 1t70_A 61 LTLGNHAWHHKDIYPMLSEDT----Y-PIV-RPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDAL 134 (255)
T ss_dssp EECCTTTTSSTTHHHHHHTTC----S-CEE-CCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHH
T ss_pred EEeccccccCchHHHHHhhCC----C-cEE-EEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHH
Confidence 466999998531111111000 0 000 001122 22234566678888754 45554442221112223446666
Q ss_pred HhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007227 441 LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 441 L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
+++. +...+|+..|.-. ++ + .+.+.. ...-+||+++.||.|...
T Consensus 135 v~~l---~~d~IIv~~H~e~--t~-----------E---k~~la~-~~dg~vd~VvGgHTHv~~ 178 (255)
T 1t70_A 135 LERD---DLGTVFVDFHAEA--TS-----------E---KEAMGW-HLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp TTCS---SCCEEEEEEECSC--HH-----------H---HHHHHH-HHTTSSSEEEEESSCSCB
T ss_pred HHHh---CCCEEEEEeCCCC--hH-----------H---HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 6654 5678999999421 00 1 122322 234569999999999843
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=3.8e-05 Score=86.19 Aligned_cols=192 Identities=16% Similarity=0.104 Sum_probs=89.0
Q ss_pred CCceEEEEEecCCCCCCCCCCccc------ccccChHHHHHHHHHhc--CCCC-EEEEcCccccCCCcc--cHHHHHHHh
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYN------NFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYI--SQWDQFTAQ 352 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~------~~~~~s~~~~~~l~~~~--~~pd-fvl~~GDi~Y~~g~~--~~wd~f~~~ 352 (612)
.-.++|++++|+|..-......|. ....+-+..+..++++. .+++ ++|..||++...... .......+.
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 89 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAV 89 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHH
Confidence 345899999999954221000000 00111233344444331 2455 899999999532111 011222233
Q ss_pred hhccccCCCeEEccCCCccCCCCC--CCCCCCCCCCCccccccc-cccccCCC----CCCceEEEEEeCC--EEEEEEcC
Q 007227 353 IEPIASTVPYMIASGNHERDWPGT--GSFYGNMDSGGECGVLVE-NMFYVPTE----NRAKFWYSTDYGM--FRFCIADT 423 (612)
Q Consensus 353 i~~l~~~vP~~~~~GNHD~~~~~~--~~~y~~~dsgge~g~~~~-~~f~~P~~----~~~~~yYsfd~G~--v~Fi~LDT 423 (612)
|..+ ..- ++++||||+++... ..+++ +++.|+. ........ ..-+.|--++.++ +-||.+.+
T Consensus 90 ln~l--g~D-~~tlGNHEfd~G~~~l~~~~~------~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~ 160 (579)
T 3ztv_A 90 MNAG--NFH-YFTLGNHEFDAGNEGLLKLLE------PLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDT 160 (579)
T ss_dssp HHHH--TCS-EEECCSGGGTTHHHHHHHHHT------TCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEEC
T ss_pred HHhc--CcC-eeeccccccccCHHHHHHHHH------hcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEc
Confidence 3322 223 46799999874210 00010 0001110 00000000 0113456678887 45666644
Q ss_pred -CC-----CCCCC---HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCe
Q 007227 424 -EQ-----DWREG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVD 493 (612)
Q Consensus 424 -~~-----~~~~g---~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vd 493 (612)
.. ....+ ....+-+++.+++........+|++.|.+. - . ... +.++ .+||
T Consensus 161 ~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~-~--------------~--d~~---la~~~~giD 220 (579)
T 3ztv_A 161 VNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGS-E--------------K--NIE---IAQKVNDID 220 (579)
T ss_dssp SHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCH-H--------------H--HHH---HHHHCSSCC
T ss_pred CCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc-h--------------h--hHH---HHHhCCCCC
Confidence 10 00011 122344455544443244678999999775 0 0 112 2222 4799
Q ss_pred EEEecccccce
Q 007227 494 IAVFGHVHNYE 504 (612)
Q Consensus 494 lvlsGH~H~Ye 504 (612)
++|+||.|...
T Consensus 221 lIlgGHtH~~~ 231 (579)
T 3ztv_A 221 VIVTGDSHYLY 231 (579)
T ss_dssp EEEECSSCCEE
T ss_pred EEEeCCCCccc
Confidence 99999999865
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=9.1e-05 Score=81.78 Aligned_cols=204 Identities=12% Similarity=0.060 Sum_probs=90.1
Q ss_pred ceEEEEEecCCCCCCCCCCcccc---cccChHHHHHHHHHh--cCCCCEEEE-cCccccCCCcc--cHHHHHHHhhhccc
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNN---FQRGSLNTTRQLIQD--LKNIDIVFH-IGDICYANGYI--SQWDQFTAQIEPIA 357 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~---~~~~s~~~~~~l~~~--~~~pdfvl~-~GDi~Y~~g~~--~~wd~f~~~i~~l~ 357 (612)
.++|+.++|+|..-......|.. -..+.+..+..++++ ..+++.+++ +||++...... .......+.+..+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln~l- 84 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMNTM- 84 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHTTS-
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhhhhcCChHHHHHHHhc-
Confidence 48999999999543211000100 011223444444443 146776655 99998422110 1112223333222
Q ss_pred cCCCeEEccCCCccCCCCC--CCCCCCCCCCCccccccc-cccccCC-CC--CCceEEEEEeCC--EEEEEEcCCC----
Q 007227 358 STVPYMIASGNHERDWPGT--GSFYGNMDSGGECGVLVE-NMFYVPT-EN--RAKFWYSTDYGM--FRFCIADTEQ---- 425 (612)
Q Consensus 358 ~~vP~~~~~GNHD~~~~~~--~~~y~~~dsgge~g~~~~-~~f~~P~-~~--~~~~yYsfd~G~--v~Fi~LDT~~---- 425 (612)
-+-++++||||+++... ..++. +++.|+- ....... .. ..+.|.-++.++ +-|+.+-+..
T Consensus 85 --g~D~~tlGNHEfd~G~~~l~~~l~------~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~ 156 (509)
T 3ive_A 85 --PFDAVTIGNHEFDHGWDNTLLQLS------QAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFND 156 (509)
T ss_dssp --CCSEECCCGGGGTTCHHHHHHHHT------TCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHH
T ss_pred --CCcEEeecccccccCHHHHHHHHh------hCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCccccc
Confidence 23356789999875210 00010 0001100 0000000 00 023356678888 4556664321
Q ss_pred -CCC---CC---HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEe
Q 007227 426 -DWR---EG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVF 497 (612)
Q Consensus 426 -~~~---~g---~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvls 497 (612)
.+. .+ ....+.+++.+++.. .+...+|++.|.++.+..... ......... +.-..+.++ .+||++|+
T Consensus 157 ~~~~~~~~g~~~~d~~~~~~~~v~~Lk-~~~D~iIvl~H~G~~~~~~~~--~~~~~~~~~--~~d~~la~~~~giDlIlg 231 (509)
T 3ive_A 157 TVSAATRVGIEARDEIKWLQRYIDELK-GKVDLTVALIHEGVPARQSSM--GGTDVRRAL--DKDIQTASQVKGLDILIT 231 (509)
T ss_dssp HSCGGGCTTEEECCHHHHHHHHHHHHT-TTCSEEEEEEECSSCCCCCCC-----CCCCCC--HHHHHHHHHCSSCCEEEE
T ss_pred ccccccCCCCEEcCHHHHHHHHHHHHH-hcCCEEEEEeccCcCCccccc--ccccccccc--chHHHHHhcCCCCcEEEe
Confidence 010 11 223445555555443 237789999998752221110 000000001 111233344 37999999
Q ss_pred cccccc
Q 007227 498 GHVHNY 503 (612)
Q Consensus 498 GH~H~Y 503 (612)
||.|..
T Consensus 232 GHtH~~ 237 (509)
T 3ive_A 232 GHAHVG 237 (509)
T ss_dssp ESSCCC
T ss_pred CCcCcc
Confidence 999963
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=4.7e-05 Score=84.81 Aligned_cols=191 Identities=13% Similarity=0.093 Sum_probs=90.4
Q ss_pred CceEEEEEecCCCCCCCCCCcccc------cccChHHHHHHHHHhc--CCC-CEEEEcCccccCCCccc--HHHHHHHhh
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNN------FQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYIS--QWDQFTAQI 353 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~------~~~~s~~~~~~l~~~~--~~p-dfvl~~GDi~Y~~g~~~--~wd~f~~~i 353 (612)
..++|++++|+|..-.. ...+.. -..+.+..+..++++. .++ +++|.+||++....... ......+.+
T Consensus 24 ~~l~Il~~nD~Hg~~~~-~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQ-TSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp EEEEEEEECCCTTCCSC-BCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred eEEEEEEecccccCCcc-cccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 35999999999954221 000000 0011233344444331 244 69999999994322111 112223333
Q ss_pred hccccCCCeEEccCCCccCCCCC--C-CCCCCCCCCCccccccc-cccc-----cCC-CCCCceEEEEEeCCEE--EEEE
Q 007227 354 EPIASTVPYMIASGNHERDWPGT--G-SFYGNMDSGGECGVLVE-NMFY-----VPT-ENRAKFWYSTDYGMFR--FCIA 421 (612)
Q Consensus 354 ~~l~~~vP~~~~~GNHD~~~~~~--~-~~y~~~dsgge~g~~~~-~~f~-----~P~-~~~~~~yYsfd~G~v~--Fi~L 421 (612)
..+ ... +.++||||+++... . .++. +++.++. .... -|. ....+.|.-++.++++ ||.+
T Consensus 103 n~l--g~d-~~~~GNHEfd~g~~~l~~~~~~------~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~ 173 (546)
T 4h2g_A 103 NAL--RYD-AMALGNHEFDNGVEGLIEPLLK------EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGY 173 (546)
T ss_dssp HHH--TCS-EEECCGGGGTTHHHHHHTTTTT------TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEE
T ss_pred Hhc--CCc-EEeccCcccccCHHHHHHHHHh------hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEe
Confidence 332 233 57799999974210 0 1111 1111110 0000 000 0012346667888854 5566
Q ss_pred cCCCC--C-CCC-----HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCe
Q 007227 422 DTEQD--W-REG-----TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVD 493 (612)
Q Consensus 422 DT~~~--~-~~g-----~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vd 493 (612)
.+... + .++ ....+.+++.+++........+|++.|.+. . . ...+...+ .+||
T Consensus 174 ~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~-~---------------~-d~~la~~~--~giD 234 (546)
T 4h2g_A 174 TSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGF-E---------------M-DKLIAQKV--RGVD 234 (546)
T ss_dssp ECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCH-H---------------H-HHHHHHHS--TTCC
T ss_pred cccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCc-c---------------c-hHHHHHhC--CCCc
Confidence 54321 0 111 122344444444432235678999999875 1 0 11222111 4799
Q ss_pred EEEecccccce
Q 007227 494 IAVFGHVHNYE 504 (612)
Q Consensus 494 lvlsGH~H~Ye 504 (612)
++|+||.|...
T Consensus 235 lIlgGHtH~~~ 245 (546)
T 4h2g_A 235 VVVGGHSNTFL 245 (546)
T ss_dssp EEECCSSCCCC
T ss_pred EEEeCCcCccc
Confidence 99999999853
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00035 Score=78.01 Aligned_cols=75 Identities=12% Similarity=0.136 Sum_probs=42.6
Q ss_pred eEEEEEeCC--EEEEEEcCCC-----------C--CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCC
Q 007227 407 FWYSTDYGM--FRFCIADTEQ-----------D--WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVE 471 (612)
Q Consensus 407 ~yYsfd~G~--v~Fi~LDT~~-----------~--~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~ 471 (612)
.|.-++.++ +.||.+.+.. . +....++.+-+.+.|++ .+...+|++.|.|+ ..
T Consensus 201 py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~-~~-------- 268 (562)
T 2wdc_A 201 AYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGM-QL-------- 268 (562)
T ss_dssp SEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCH-HH--------
T ss_pred CeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCC-cc--------
Confidence 355677887 5566665432 1 11112333222333443 35678999999886 10
Q ss_pred CCccchhhHHHHHHHHHh-CCCeEEEecccccce
Q 007227 472 GSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 472 ~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
. + .+.++ .+||++|+||.|...
T Consensus 269 -----d--~----~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 269 -----D--A----ALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp -----H--H----HHHTTSSSCCEEEECSSCCCC
T ss_pred -----h--H----HHHhcCCCCcEEEeCCCCCCC
Confidence 0 1 23333 489999999999853
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=97.63 E-value=7.8e-05 Score=72.37 Aligned_cols=83 Identities=11% Similarity=0.228 Sum_probs=44.9
Q ss_pred ccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCc--
Q 007227 267 YIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGY-- 342 (612)
Q Consensus 267 ~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~-- 342 (612)
..|+....|.+.. -+|++++||+|.. ...++++++.. .++|+|+++||++.....
T Consensus 12 ~~~~~~~~~~~~~------mmki~~iSD~H~~---------------~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~ 70 (208)
T 1su1_A 12 DLGTENLYFQSNA------MMKLMFASDIHGS---------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNA 70 (208)
T ss_dssp -------------------CCEEEEECCCTTB---------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSC
T ss_pred ccCcccceecccc------cEEEEEEEcCCCC---------------HHHHHHHHHHHHhcCCCEEEECCCccccCcccc
Confidence 3456666664422 2799999999853 12333443322 579999999999953221
Q ss_pred -ccH--HHHHHHhhhccccCCCeEEccCCCccC
Q 007227 343 -ISQ--WDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 343 -~~~--wd~f~~~i~~l~~~vP~~~~~GNHD~~ 372 (612)
... -.+..+.++.+. .|+++++||||..
T Consensus 71 ~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD~~ 101 (208)
T 1su1_A 71 LPEGYAPAKVVERLNEVA--HKVIAVRGNCDSE 101 (208)
T ss_dssp CCTTBCHHHHHHHHHTTG--GGEEECCCTTCCH
T ss_pred cccccCHHHHHHHHHhcC--CceEEEECCCchH
Confidence 111 134455554432 5899999999974
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0011 Score=67.35 Aligned_cols=171 Identities=15% Similarity=0.074 Sum_probs=87.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCh---HHHHHHHHHhcCCCCEEEEcCccccCC-CcccHHHHHHHhhhccccCCCe
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGS---LNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s---~~~~~~l~~~~~~pdfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~~~vP~ 362 (612)
+||+++||++.. ++. ...++++.++ .++|+++..||.+... +.. ....+.+..+ .+-
T Consensus 5 m~ilf~GDv~G~------------~G~~~l~~~l~~lr~~-~~~d~vi~Ngen~~gG~g~~---~~~~~~ln~~--G~D- 65 (281)
T 1t71_A 5 IKFIFLGDVYGK------------AGRNIIKNNLAQLKSK-YQADLVIVNAENTTHGKGLS---LKHYEFLKEA--GVN- 65 (281)
T ss_dssp CEEEEECEEBHH------------HHHHHHHTTHHHHHHH-HTCSEEEEECTBTTTTSSCC---HHHHHHHHHH--TCC-
T ss_pred EEEEEECCcCCh------------HHHHHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCCcC---HHHHHHHHhc--CCC-
Confidence 899999999622 111 1233444332 2589999999998533 332 2222222221 233
Q ss_pred EEccCCCccCCC-CCCCCCCCCCCCCccccccccccccCCCC----CCceEEEEEeCCEE--EEEEcCCCCCCC--CHHH
Q 007227 363 MIASGNHERDWP-GTGSFYGNMDSGGECGVLVENMFYVPTEN----RAKFWYSTDYGMFR--FCIADTEQDWRE--GTEQ 433 (612)
Q Consensus 363 ~~~~GNHD~~~~-~~~~~y~~~dsgge~g~~~~~~f~~P~~~----~~~~yYsfd~G~v~--Fi~LDT~~~~~~--g~~Q 433 (612)
..++||||+++. ..-.|.+ .. . +.. .-++|... .++.|.-++.++++ +|.+-+...+.+ -..-
T Consensus 66 a~TlGNHefD~g~~~~~~l~---~~-~---~v~-~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~p 137 (281)
T 1t71_A 66 YITMGNHTWFQKLDLAVVIN---KK-D---LVR-PLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNP 137 (281)
T ss_dssp EEECCTTTTCCGGGHHHHTT---CT-T---EEC-BSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCH
T ss_pred EEEEccCcccCCccHHHHhh---hc-C---EEe-eccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCH
Confidence 357799999864 1001111 00 0 000 00112111 23456778888744 555544431221 1222
Q ss_pred HHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007227 434 YRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 434 ~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
.+-+++.++ +.+...+||..|.-. . .+ .+.+.. ....+||+++.||.|...
T Consensus 138 f~~a~~~v~---~~~~diIIv~~H~g~--t-----------~E---k~~la~-~~dg~VD~VvGgHTHv~t 188 (281)
T 1t71_A 138 FKVLKELIL---KRDCDLHIVDFHAET--T-----------SE---KNAFCM-AFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp HHHHHHHHT---TCCCSEEEEEEECSC--H-----------HH---HHHHHH-HHTTTSSEEEEESSSSCC
T ss_pred HHHHHHHHh---hcCCCEEEEEeCCCc--h-----------HH---HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 444555555 356789999999421 0 01 122322 223569999999999854
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0035 Score=69.74 Aligned_cols=85 Identities=18% Similarity=0.127 Sum_probs=42.1
Q ss_pred CceEEEEEecCCCCCCCCCC--cccccccChHHHHHHHHHh---cCCCC-EEEEcCccccCCCccc----HHHHHHHhhh
Q 007227 285 SLQQVIIFGDMGKDEADGSN--EYNNFQRGSLNTTRQLIQD---LKNID-IVFHIGDICYANGYIS----QWDQFTAQIE 354 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~--~~~~~~~~s~~~~~~l~~~---~~~pd-fvl~~GDi~Y~~g~~~----~wd~f~~~i~ 354 (612)
..++|+.++|+|..-..... .|.. ..+.+..+...+++ ..+++ +++.+||++....... ..+...+.+.
T Consensus 14 ~~l~ILhtnD~Hg~~~~~~~~~~~~~-~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln 92 (557)
T 3c9f_A 14 NDINFVHTTDTHGWYSGHINQPLYHA-NWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 92 (557)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGGGCC-CHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred eEEEEEEEcccccCccCccccccccc-ccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHH
Confidence 45999999999975321110 1100 01112333333332 25677 5789999994321110 1111122222
Q ss_pred ccccCCCeEEccCCCccCC
Q 007227 355 PIASTVPYMIASGNHERDW 373 (612)
Q Consensus 355 ~l~~~vP~~~~~GNHD~~~ 373 (612)
.+ ..- ++++||||+++
T Consensus 93 ~l--g~D-a~tlGNHEfD~ 108 (557)
T 3c9f_A 93 KQ--DYD-LLTIGNHELYL 108 (557)
T ss_dssp TS--CCS-EECCCGGGSSS
T ss_pred hc--CCC-EEeecchhccc
Confidence 21 223 56889999974
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0039 Score=53.12 Aligned_cols=99 Identities=16% Similarity=0.115 Sum_probs=60.1
Q ss_pred CCCCcceeeecC-CCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 167 NAPVYPRLAQGK-VWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 167 ~~P~~~~La~~~-~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
.+|..+.+.... +.++++|+|........ ..-.|+|...+..... .-..... .+....+
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~-----------------~~~~~~~ 71 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPID-DWIMETI-----------------SGDRLTH 71 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTT-TSEEEEE-----------------ETTCCEE
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCcc-ceEEEEE-----------------CCCceEE
Confidence 456666664433 57899999987642110 1235666543221100 0000011 1123457
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~ 283 (612)
+|++|+|++.|.+||......|...||....|+|.+.+..
T Consensus 72 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 72 QIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp EECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 8999999999999998875556667899999999876544
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.003 Score=52.94 Aligned_cols=93 Identities=14% Similarity=0.090 Sum_probs=56.8
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCC-CccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGD-RTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
|.+|..+.+. ..+.++++|.|....+..-..-.|+|...... .+.... .......+
T Consensus 8 P~~P~~~~~~-~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------------------~~~~~~~~ 64 (106)
T 2dju_A 8 PKPPIDLVVT-ETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD----------------------GVATTRYS 64 (106)
T ss_dssp CCCCEEEEEE-EEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC----------------------CCCSSEEE
T ss_pred CcCCCCcEEE-eccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc----------------------CCCccEEE
Confidence 4556555552 23568999999976321112345667654322 111100 00112357
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
|++|+|++.|.+||......|...||+...++|.+..
T Consensus 65 i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 65 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp EESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred EeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 8999999999999997755566668888889987643
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0018 Score=55.03 Aligned_cols=96 Identities=16% Similarity=0.182 Sum_probs=58.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++ ...+.++++|.|........ ..-.|+|...+.... ...... +-...+
T Consensus 11 P~~P~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~----~~~~~~-----------------~~~~~~ 68 (111)
T 1x5l_A 11 PSQVVVIRQ-ERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQ----SYSTLK-----------------AVTTRA 68 (111)
T ss_dssp CCCCCCEEC-SCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCS----SCEEEE-----------------ESSSEE
T ss_pred CCCCceEEE-EEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCce----eEEEec-----------------CCCCEE
Confidence 445554444 23457899999976532110 123566655432110 000111 112356
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~ 283 (612)
+|++|+|++.|.+||......|...||....|+|++.++.
T Consensus 69 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 69 TVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 7899999999999998765555567899999999887654
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0062 Score=52.22 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=34.8
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
..++|++|+|+|.|.+||..-...|...+|+...|+|.+.+.
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 357899999999999999877556666789999999987654
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0075 Score=62.89 Aligned_cols=49 Identities=24% Similarity=0.177 Sum_probs=27.8
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
.....+|++.|..+ ..+.. . ...+.. ...|..-+ -+||++|.||.|...
T Consensus 206 ~g~D~II~l~H~G~--~~d~~-~---~~~e~~-~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 206 EGADVIIALAHTGI--EKQAQ-S---SGAENA-VFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp TTCSEEEEEECCCC--CSSCC-C---TTCSSC-HHHHHHHC--SCCCEEEECSSCCEE
T ss_pred cCCCEEEEEeccCc--ccccc-c---cccchh-HHHHHhcC--CCCcEEEECCCCccC
Confidence 45788999999775 11110 0 001111 11222212 489999999999853
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0023 Score=54.35 Aligned_cols=94 Identities=16% Similarity=0.213 Sum_probs=58.0
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC---CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+ ...+.++++|.|........ ..-.|+|...+...... ..+. +...
T Consensus 7 ~P~~P~~p~~-~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~----~~~~-----------------~~~~ 64 (109)
T 1x5x_A 7 GPSMPASPVL-TKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFK----PKYD-----------------GEDL 64 (109)
T ss_dssp CCCCCCCCEE-EEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCE----EEEE-----------------ESCS
T ss_pred CCcCCCCCEE-EEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceE----EeEe-----------------CCcc
Confidence 3556777775 34467899999986643111 12356666543211100 0111 0122
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
..++++|+|++.|.+||......|...+|....++|.+.
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCC
Confidence 467899999999999999875556566788888998764
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00079 Score=65.52 Aligned_cols=64 Identities=17% Similarity=0.294 Sum_probs=43.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
.|++++||+|.. ...+.++++.. .++|.|+++||++. .|... .+.++.+. ..+++
T Consensus 13 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~-~g~~~--~~~~~~l~----~~~~~ 70 (221)
T 1g5b_A 13 RNIWVVGDLHGC---------------YTNLMNKLDTIGFDNKKDLLISVGDLVD-RGAEN--VECLELIT----FPWFR 70 (221)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTCEEEECSCCSS-SSSCH--HHHHGGGG----STTEE
T ss_pred ceEEEEEcCCCC---------------HHHHHHHHHHccCCCCCCEEEEeCCccC-CCCCh--HHHHHHHh----cCCEE
Confidence 689999999842 23455555543 36899999999994 44322 12333332 35899
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 71 ~v~GNhd~~ 79 (221)
T 1g5b_A 71 AVRGNHEQM 79 (221)
T ss_dssp ECCCHHHHH
T ss_pred EEccCcHHH
Confidence 999999964
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.015 Score=64.24 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=43.1
Q ss_pred ceEEEEEeCCE--EEEEEcCCCC-----------CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCC
Q 007227 406 KFWYSTDYGMF--RFCIADTEQD-----------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEG 472 (612)
Q Consensus 406 ~~yYsfd~G~v--~Fi~LDT~~~-----------~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~ 472 (612)
..|.-++.+++ -||.+-+... +...-+..+...+.|++ .+...+|++.|..+ .
T Consensus 134 ~py~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~--~--------- 199 (530)
T 4h1s_A 134 LPYKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGF--E--------- 199 (530)
T ss_dssp BSEEEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH--H---------
T ss_pred cceEEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCc--h---------
Confidence 34667888885 4566655421 11112223333344543 45678999999653 0
Q ss_pred CccchhhHHHHHHHHHh-CCCeEEEecccccce
Q 007227 473 SFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 473 ~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
.+ ..+.++ -+||++|.||.|.+-
T Consensus 200 -------~d--~~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 200 -------MD--KLIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp -------HH--HHHHHHSTTCCEEECCSSCCCB
T ss_pred -------HH--HHHHhcCCCCCeeccCCcccee
Confidence 11 113333 379999999999853
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0031 Score=53.80 Aligned_cols=93 Identities=16% Similarity=0.169 Sum_probs=56.0
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++ ...+.+++.|+|.......-..-.|+|...+...... ... +-....+|
T Consensus 18 P~~P~~l~~-~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~------------------~~~~~~~i 74 (115)
T 1x5z_A 18 PGQPLNFKA-EPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQR----ITI------------------EPGTSYRL 74 (115)
T ss_dssp CCCCEEEEE-ECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBC----CEE------------------CSSSEEEE
T ss_pred CCCCccCEe-eeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceE----Eec------------------CCCcEEEE
Confidence 344555554 3345789999998764311112344554332211100 000 01135678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
+||+|++.|.+||......|...||....|+|.+.+
T Consensus 75 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 75 QGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp ECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred CCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 999999999999987755566678888999998653
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=96.93 E-value=0.031 Score=52.76 Aligned_cols=133 Identities=11% Similarity=0.096 Sum_probs=72.6
Q ss_pred ccceEEEEEEeeccc--ceEEEEEec---CCCCcEEEEeccceec------cCCCCCCcceeeecCCCCcEEEEEEeCCC
Q 007227 124 TGKGSLKLQLINQRS--DFSFVLFTN---GLLNPKVVAVSNKVTF------TNPNAPVYPRLAQGKVWNEMTVTWTSGYG 192 (612)
Q Consensus 124 ~g~~~~~~~l~n~r~--~~~f~~~~~---~~~~p~~~a~s~~~~~------~~~~~P~~~~La~~~~~~~m~V~W~T~~~ 192 (612)
.+.....+.+-+.+. .|.|++... |...+ -..+..+.. ..+.+|..+.+ ...+.++++|+|.....
T Consensus 65 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~--s~~s~~~~~~~~~~~~~~~~P~~~~~-~~~~~~sv~l~W~~p~~ 141 (214)
T 2ibg_A 65 ELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKE--SNTSAKFYLQPGAALDPMPVPELLEI-EEYSETAVVLHWSLASD 141 (214)
T ss_dssp SSEEEEEEEECSCCTTCEEEEEEEEEETTSCEEE--CCCCCCEECCCSTTSCCCCCCEECCC-BCCSSSCEEEEEECCTT
T ss_pred ccCcceeEEecCCcCCCEEEEEEEEEecCCCCCC--CCCcccEEeccCcCCCCCCCCcccEE-EEccCCeEEEEEeCCCc
Confidence 345566777777775 577777654 22210 000111111 12223444333 23357899999987631
Q ss_pred ---CCCCccEEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCcc
Q 007227 193 ---INEAEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYI 268 (612)
Q Consensus 193 ---~~~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~ 268 (612)
..-..-.|+|...+. ..+. ..... ..-....+|+||+|++.|.|||......|...
T Consensus 142 ~~~~~i~~Y~v~~~~~~~~~~~~----~~~~~----------------~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~ 201 (214)
T 2ibg_A 142 ADEHLITGYYAYYRPSSSAGEYF----KATIE----------------GAHARSFKIAPLETATMYEFKLQSFSAASASE 201 (214)
T ss_dssp CCGGGCCEEEEEEEETTCCSCCE----EEEEE----------------CTTCCEEEECSCCTTCEEEEEEEEECSSCBCC
T ss_pred cCCCCcceEEEEEEECCCCcceE----Eeecc----------------CCcceEEEeCCCCCCCEEEEEEEEEcCCccCC
Confidence 001123566665433 1111 01111 11122457899999999999999876566667
Q ss_pred ccceEEEEcCC
Q 007227 269 WSSEYQFKASP 279 (612)
Q Consensus 269 ~S~~~~F~T~p 279 (612)
+|....++|..
T Consensus 202 ~S~~~~~~T~~ 212 (214)
T 2ibg_A 202 FSALKQGRTQR 212 (214)
T ss_dssp CCCCEEEECCC
T ss_pred CcceEeeEecC
Confidence 88889999864
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0033 Score=55.27 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=57.4
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC------CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE------AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
|.+|..+++ ...+.+++.|+|........ ..-.|+|...+..... ..... ..
T Consensus 19 p~~P~~l~~-~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~----~~~~~-----------------~~ 76 (123)
T 2edd_A 19 MLPPVGVQA-VALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAK----YKSED-----------------TT 76 (123)
T ss_dssp SCCCEEEEE-EEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCC----CCCEE-----------------ES
T ss_pred CCCCcceEE-EEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCcc----EEEEe-----------------CC
Confidence 445655555 33457999999986532110 0235677654321100 00000 01
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|.++|......|...||....|+|.+.
T Consensus 77 ~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 77 SLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred ceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 23578999999999999998764456667999999999876
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0023 Score=54.50 Aligned_cols=95 Identities=19% Similarity=0.214 Sum_probs=58.4
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+....+.++++|.|....... -..-.|+|...+...+... +. +...
T Consensus 8 ~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~-----------------~~~~ 65 (110)
T 2crz_A 8 PPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREV-----YQ-----------------GSEV 65 (110)
T ss_dssp CCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEE-----EE-----------------ESCS
T ss_pred CCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEE-----Ee-----------------CCcE
Confidence 356677776633345689999996542100 1123566654332222110 11 1123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
..++++|+|++.|.+||......|...||+...++|.+.+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 66 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 4578999999999999998755566678888899987654
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.031 Score=51.62 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=62.9
Q ss_pred EEEEeeccc--ceEEEEEec---CCCCcEEEEeccceeccCCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEcc
Q 007227 130 KLQLINQRS--DFSFVLFTN---GLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGP 204 (612)
Q Consensus 130 ~~~l~n~r~--~~~f~~~~~---~~~~p~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~ 204 (612)
++.|-+.+. .|.|.+... +.+.|..+.. ...|.+|..+.+ ...+.++++|.|.-..+ .-..-.|+|..
T Consensus 59 ~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~-----~t~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~ 131 (186)
T 1qr4_A 59 SFILRGLDAGTEYTISLVAEKGRHKSKPTTIKG-----STVVGSPKGISF-SDITENSATVSWTPPRS-RVDSYRVSYVP 131 (186)
T ss_dssp EEEEESCCSSCEEEEEEEEESSSCBCCCEEEEE-----ECCCCCCSCEEE-ESCCSSCEEEEECCCSS-CCSEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCEEEEE-----ECCCCCCCccEE-EEeCCCEEEEEEECCCC-cccEEEEEEEe
Confidence 344445543 466666553 2223322211 124667776655 23457999999986532 12234566765
Q ss_pred CCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCcccc--ceEEEEcCCC
Q 007227 205 KGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWS--SEYQFKASPY 280 (612)
Q Consensus 205 ~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S--~~~~F~T~p~ 280 (612)
.++... ...... +-....+|+||+||+.|.++|...... +.| ....|+|.|.
T Consensus 132 ~~~~~~----~~~~~~-----------------~~~~~~~i~~L~p~t~Y~~~V~A~~~~---g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 132 ITGGTP----NVVTVD-----------------GSKTRTKLVKLVPGVDYNVNIISVKGF---EESEPISGILKTALD 185 (186)
T ss_dssp TTCCCC----EEEEEE-----------------TTCCEEEECSCCSSCEEEEEEEEEETT---EECCCEEEEEEC---
T ss_pred CCCCCc----eEEEcC-----------------CCcCEEEEcCCCCCCEEEEEEEEEcCC---CcCcCEEEEEEecCC
Confidence 432111 011111 122456789999999999999875322 223 3456777764
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.004 Score=52.66 Aligned_cols=94 Identities=13% Similarity=0.151 Sum_probs=57.4
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCC---ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEA---EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++ ...+.+++.|.|...... .+ .-.|+|...+..... ..... +-..
T Consensus 7 ~P~~P~~l~~-~~~~~~sv~l~W~~p~~~-~g~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~ 63 (108)
T 2djs_A 7 GPSTVPIMHQ-VSATMRSITLSWPQPEQP-NGIILDYEIRYYEKEHNEFN----SSMAR-----------------SQTN 63 (108)
T ss_dssp CCCCCSCCEE-EEECSSEEEEECCCCSCC-SSCEEEEEEEEEETTSCSTT----CEEEE-----------------ESSS
T ss_pred CCCCCcceEE-EecCCCEEEEEECCCCCC-CCeEEEEEEEEEECCCCCcc----eeEEe-----------------cCcc
Confidence 3455665555 233578999999876321 11 123455443321110 00000 1124
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
.++|+||+|++.|.+||......|...||....|+|++..
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 64 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 5678999999999999987755666678899999998754
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0016 Score=54.54 Aligned_cols=37 Identities=24% Similarity=0.215 Sum_probs=30.7
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
.+|+||+|++.|.+||......|...||+...|+|.|
T Consensus 66 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 66 FTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred EEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 4789999999999999877555666788888888876
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0048 Score=52.30 Aligned_cols=92 Identities=17% Similarity=0.225 Sum_probs=56.3
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++. ..+.+++.|.|....... -..-.|+|...+... ...+. +.....
T Consensus 8 P~~P~~~~~~-~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~------~~~~~-----------------~~~~~~ 63 (106)
T 1x4x_A 8 PDQCKPPQVT-CRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSM------QICYC-----------------GPGLSY 63 (106)
T ss_dssp CCCCCCCCCE-EEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSC------CEEEE-----------------ESCSEE
T ss_pred cCCCCCCEEE-EcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCce------EEEEe-----------------CCcceE
Confidence 4556666653 235789999998764210 011345555432111 01111 011246
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
+|+||+|++.|.+||......|...||+...++|.+.+
T Consensus 64 ~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 64 EIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 78999999999999998755566678999999998653
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0074 Score=51.87 Aligned_cols=94 Identities=15% Similarity=0.112 Sum_probs=56.7
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCC-CCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGY-GIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~-~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+++. ..+.++++|.|.... ... -..-.|+|...+...+. .... ..+-...
T Consensus 18 P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~~~ 76 (120)
T 1x5f_A 18 PSAPRDVVAS-LVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARER------VENT--------------SHPGEMQ 76 (120)
T ss_dssp CCCCEEEEEE-EECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCE------EEEC--------------SSTTCSE
T ss_pred CCCCCCcEEE-ecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCce------EEEe--------------ccCCccE
Confidence 4455555442 335789999998764 211 11235666654322111 0000 0112345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
++|++|+|++.|.+||......|...||+...|+|.+.
T Consensus 77 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 77 VTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 68899999999999998775556556888899999754
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0059 Score=52.09 Aligned_cols=41 Identities=24% Similarity=0.376 Sum_probs=35.0
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~ 283 (612)
++|+||+|+|.|.+||......|...||+...|+|.+.++.
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 78999999999999999875556667899999999887654
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0027 Score=54.94 Aligned_cols=93 Identities=13% Similarity=0.101 Sum_probs=57.3
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC------CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE------AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
|.+|..+++ ...+.+++.|+|.-...... ..-.|+|....... ....+. .+-
T Consensus 9 p~~P~~l~~-~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~-----~~~~~~----------------~~~ 66 (113)
T 1x5j_A 9 MMPPVGVQA-SILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN-----TKYKNA----------------NAT 66 (113)
T ss_dssp CCCCEEEEE-EEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSS-----CCCEEC----------------CBC
T ss_pred CCCCcceEE-EEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCC-----eEEEEE----------------ecC
Confidence 345666655 33457999999986532110 02356676521100 001110 112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|.++|......|...||....++|.+.
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 34678999999999999998775556667899999999765
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0017 Score=65.87 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=43.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
++++++||+|.. ...+.++++.. .++|.++++||++ +.|..+ .+.++.+..+. .+++
T Consensus 1 M~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~d~~v~lGD~v-drG~~s--~~~l~~l~~l~--~~~~ 60 (280)
T 2dfj_A 1 MATYLIGDVHGC---------------YDELIALLHKVEFTPGKDTLWLTGDLV-ARGPGS--LDVLRYVKSLG--DSVR 60 (280)
T ss_dssp -CEEEECCCCSC---------------HHHHHHHHHHTTCCTTTCEEEECSCCS-SSSSCH--HHHHHHHHHTG--GGEE
T ss_pred CeEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCcC-CCCCcc--HHHHHHHHhCC--CceE
Confidence 368999999843 34466666653 3579999999999 445432 12333333321 2799
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 61 ~v~GNHe~~ 69 (280)
T 2dfj_A 61 LVLGNHDLH 69 (280)
T ss_dssp ECCCHHHHH
T ss_pred EEECCCcHH
Confidence 999999964
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0075 Score=51.23 Aligned_cols=96 Identities=18% Similarity=0.152 Sum_probs=58.1
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++ ...+.+++.|.|.-..... -..-.|+|...++..... ...... .. ..+
T Consensus 8 P~~p~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~---~~~~~~---------------~~--~~~ 66 (109)
T 2e7h_A 8 PPAVSDIRV-TRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSS---VRFLKT---------------SE--NRA 66 (109)
T ss_dssp SCCCCCCEE-EEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTT---SEEEEE---------------SS--SEE
T ss_pred CCCCCccEE-EecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCce---eEEEcc---------------CC--CEE
Confidence 445555555 2335789999998663211 012356665543111000 001110 11 266
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
+|+||+|++.|.+||......|...||+...|+|.+.+.
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 105 (109)
T 2e7h_A 67 ELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSG 105 (109)
T ss_dssp EEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCSS
T ss_pred EECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCCC
Confidence 899999999999999987555666789999999987643
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0025 Score=54.67 Aligned_cols=94 Identities=17% Similarity=0.141 Sum_probs=56.9
Q ss_pred CCCCcceeeec---CCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 167 NAPVYPRLAQG---KVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 167 ~~P~~~~La~~---~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
..|..|.+... .+.++++|.|....... -..-.|+|.......+. ..+. +...
T Consensus 8 ~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~-----~~~~-----------------~~~~ 65 (110)
T 2db8_A 8 PVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFR-----EVYV-----------------GKET 65 (110)
T ss_dssp CCCCCCBCCCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCE-----EEEE-----------------ESCS
T ss_pred CCCCCccccceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceE-----EEEe-----------------CCcC
Confidence 34555544332 25799999998764311 01235666553321111 0011 0112
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
..+++||+|++.|.+||......|...||+...|+|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 35689999999999999877555666788889999987653
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.031 Score=58.16 Aligned_cols=47 Identities=28% Similarity=0.302 Sum_probs=27.3
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecccccce
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
.+...+|++.|..+ ..... ....+.. .. ++.+ -+||++|.||.|...
T Consensus 200 ~g~D~II~l~H~G~--~~d~~----~~~~en~-~~----~~~~v~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 200 KGADVVVVVAHSGL--SADPY----QAMAENS-VY----YLSQVPGVDAIMFGHAHAVF 247 (339)
T ss_dssp TTCSEEEEEECCCC--CCSCC----CTTCSCC-HH----HHTTSTTCCEEEECSSCSEE
T ss_pred cCCCEEEEEeccCc--ccccc----ccccchh-HH----HHhhCCCCCEEEeCCCcccc
Confidence 45788999999764 21110 0011111 11 1223 489999999999854
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0028 Score=54.86 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=56.3
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
-|.+|..+.+....+.++++|.|....... -..-.|+|..... ..+... +. +-.
T Consensus 17 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~-----~~-----------------~~~ 74 (120)
T 2crm_A 17 KPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMI-----YS-----------------GAT 74 (120)
T ss_dssp CCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEE-----EC-----------------SSC
T ss_pred CCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEE-----Ee-----------------ccc
Confidence 345666666642345789999998653210 1123455554332 111110 00 112
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
...++++|+|++.|.|||......|...||+...++|.+.+
T Consensus 75 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T 2crm_A 75 REHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVS 115 (120)
T ss_dssp SEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCS
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCC
Confidence 24578999999999999997754555567877778876543
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.004 Score=52.68 Aligned_cols=39 Identities=23% Similarity=0.208 Sum_probs=32.2
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
..++|+||+|++.|.+||......|...+|+...|+|.|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 356789999999999999876555556688899999987
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.039 Score=52.26 Aligned_cols=93 Identities=14% Similarity=0.157 Sum_probs=57.0
Q ss_pred CCCCCCcceeeecC---CCCcEEEEEEeCCCCCC------CccEEEEccCCCCCccccCcceEEeccccCCCCCcccccc
Q 007227 165 NPNAPVYPRLAQGK---VWNEMTVTWTSGYGINE------AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWR 235 (612)
Q Consensus 165 ~~~~P~~~~La~~~---~~~~m~V~W~T~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~ 235 (612)
-|.+|..+.+.... ..+++.|+|........ -.-.|+|...++..+.. ...
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~-----~~~--------------- 161 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEI-----HFA--------------- 161 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEE-----EEE---------------
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEE-----Eec---------------
Confidence 45677666665432 36899999987643110 12345565543322211 000
Q ss_pred CCCeEEEEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcCC
Q 007227 236 DPGYIHTGFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKASP 279 (612)
Q Consensus 236 ~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~-~~~S~~~~F~T~p 279 (612)
+-.....|.+|+|++.|..||......|. ..||+...|+|+.
T Consensus 162 --~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 162 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred --cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 11235678999999999999987644454 5688899999954
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.012 Score=50.63 Aligned_cols=95 Identities=15% Similarity=0.087 Sum_probs=56.2
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+++ ...+.++++|+|.......-..-.|+|...+..... ...... .+....++|+|
T Consensus 21 ~P~~l~~-~~~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~--~~~~~~-----------------~~~~~~~~i~~ 80 (119)
T 2ee2_A 21 APTEVGV-KVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEA--ANRVQV-----------------TSQEYSARLEN 80 (119)
T ss_dssp CCCSCEE-EEEETTEEEEECCCCSCTTCCEEEEEEEESSSCGGG--CEEEEE-----------------ETTCSEEEECS
T ss_pred CCCcEEE-EEccCCEEEEEecCCCCCccceEEEEEEECCCcccC--cEEEEc-----------------CCCEeEEEECC
Confidence 3444444 233578999999876320011235666543321100 000111 11224568999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 248 LWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
|+|++.|.+||......|...+|+...|+|.+.+.
T Consensus 81 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 81 LLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp CCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred CCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 99999999999877555666788889999976543
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0098 Score=50.76 Aligned_cols=91 Identities=15% Similarity=0.128 Sum_probs=56.2
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++. ..+.++++|.|....... -..-.|+|...+...+. ... ......
T Consensus 18 P~~P~~l~~~-~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~------~~~-----------------~~~~~~ 73 (116)
T 1x5g_A 18 PGPAPNLRAY-AASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQ------DVD-----------------VSSHSY 73 (116)
T ss_dssp CCCCSSCEEE-EEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCC------CEE-----------------ECSSEE
T ss_pred CcCCCccEEE-ecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccE------EEe-----------------cCCceE
Confidence 4456656552 235789999998753211 11235666554332210 000 012356
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
+|+||+|++.|.+||......|...||+...|+|.+.
T Consensus 74 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 74 TINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 7899999999999998775556666888888998764
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.015 Score=48.99 Aligned_cols=91 Identities=19% Similarity=0.237 Sum_probs=56.1
Q ss_pred CCCCCcceeeec-CCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 166 PNAPVYPRLAQG-KVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~P~~~~La~~-~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+... .+.++++|+|.-...... ..-.|+|...+...+... .. . ...
T Consensus 8 P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~------~~---------------~--~~~ 64 (108)
T 2dm4_A 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQ------RA---------------A--SNF 64 (108)
T ss_dssp TTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEE------EE---------------S--SSE
T ss_pred CcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEe------cC---------------C--ccE
Confidence 456666655433 367899999987642110 013455554433211110 00 0 125
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
++|++|+|++.|.+||......|...||+...|+|.+
T Consensus 65 ~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 65 TEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 6899999999999999877555666789999999854
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0029 Score=63.42 Aligned_cols=64 Identities=23% Similarity=0.323 Sum_probs=41.7
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CC-CCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KN-IDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~-pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
.|++++||+|.. ...++++++.. .. .|.++++||++. .|... .+.++.+.. .+++
T Consensus 19 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd-~g~~~--~~~l~~l~~----~~~~ 76 (262)
T 2qjc_A 19 GRVIIVGDIHGC---------------RAQLEDLLRAVSFKQGSDTLVAVGDLVN-KGPDS--FGVVRLLKR----LGAY 76 (262)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTSEEEECSCCSS-SSSCH--HHHHHHHHH----HTCE
T ss_pred CeEEEEeCCCCC---------------HHHHHHHHHHHhccCCCCEEEEecCCCC-CCCCH--HHHHHHHHH----CCCE
Confidence 389999999832 23455555543 23 499999999994 44322 123333332 3799
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 77 ~v~GNHd~~ 85 (262)
T 2qjc_A 77 SVLGNHDAK 85 (262)
T ss_dssp ECCCHHHHH
T ss_pred EEeCcChHH
Confidence 999999974
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0068 Score=52.84 Aligned_cols=83 Identities=16% Similarity=0.108 Sum_probs=48.7
Q ss_pred CCCCcEEEEEEeCCCCC-C-CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEE
Q 007227 178 KVWNEMTVTWTSGYGIN-E-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYT 255 (612)
Q Consensus 178 ~~~~~m~V~W~T~~~~~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~ 255 (612)
.+.++++|+|..+.+.. + ..-.|+|..++...+... ... ++....++|+||+|++.|.
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~---~~~-----------------~~~~~~~~l~~L~p~t~Y~ 78 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE---KKV-----------------QGNKDHIILEHLQWTMGYE 78 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEE---EEE-----------------ETTTCCEEECCCCTTCCEE
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEe---EEc-----------------CCCcCEEEEcCCCCCCEEE
Confidence 46899999998653211 1 123778877543322110 000 1112346799999999999
Q ss_pred EEEeeecCCCCccccceEEEEcCCCC
Q 007227 256 YKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 256 Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
+||......|...-| ...|+|.+.+
T Consensus 79 frV~A~N~~G~s~pS-~~~~~T~~~~ 103 (114)
T 2kbg_A 79 VQITAANRLGYSEPT-VYEFSMPPKP 103 (114)
T ss_dssp EEEEEECTTSCEEEE-EEEECCCCCC
T ss_pred EEEEEEeCCcCcCCc-CCEEEcCCCC
Confidence 999876433432222 4678886654
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=96.40 E-value=0.023 Score=53.77 Aligned_cols=94 Identities=16% Similarity=0.121 Sum_probs=54.9
Q ss_pred CCCcceeeecC-CCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 168 APVYPRLAQGK-VWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 168 ~P~~~~La~~~-~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
+|..+.+.... +.++++|+|....... -..-.|+|...+...... -..... ++-....+
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~ 169 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD-WVIEPV-----------------VGNRLTHQ 169 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGG-SEEEEE-----------------ESSCSEEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCc-eEEEEe-----------------cCCeeEEE
Confidence 55555654433 3689999998753211 112255665443321100 000011 11234567
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
|+||+|++.|.+||......|...+|+...|++..
T Consensus 170 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 170 IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp ECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 89999999999999877555666788888888754
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.018 Score=49.41 Aligned_cols=96 Identities=18% Similarity=0.042 Sum_probs=57.4
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCC--CC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYG--IN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~--~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
+|..+++ ...+.++++|+|..... .. -..-.|+|...+....... ... .....+-...+
T Consensus 18 ~P~~~~~-~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-~~~---------------~~~~~~~~~~~ 80 (122)
T 1va9_A 18 PPMDVTL-QPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY-SIV---------------EMKATGDSEVY 80 (122)
T ss_dssp CCEEEEE-EECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC-BCC---------------BCCCCSSEEEE
T ss_pred CCcceEE-EeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcce-EEE---------------EEecCCceeEE
Confidence 4444554 23457899999987642 00 1123566655432211000 000 00112345778
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
+|+||+|++.|.+||......|...||....|+|.+.
T Consensus 81 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 81 TLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 8999999999999998765455556888888988754
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.012 Score=50.43 Aligned_cols=95 Identities=17% Similarity=0.093 Sum_probs=57.7
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+.+. ..+.++++|.|.-...... ..-.|+|...+..... .... ...-...
T Consensus 17 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~~~ 75 (119)
T 2ed7_A 17 LPSAPRDVVPV-LVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRER------ALNT--------------TQPGSLQ 75 (119)
T ss_dssp SCCCCSCCEEE-EECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCE------EEEC--------------CCTTCCE
T ss_pred CCcCCcceEEE-ecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcce------eeEe--------------ecCCceE
Confidence 45667766653 2357899999986532110 0124455543322111 0000 0112345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
.+|++|+|++.|.+||......|...||+...++|.+.
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 76 LTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 68899999999999998775556667888899998764
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0054 Score=54.02 Aligned_cols=102 Identities=17% Similarity=0.205 Sum_probs=56.7
Q ss_pred cCCCCCC-cceeeecCCCCcEEEEEEeCCCCCCCcc-EEEEccCCCCCccccCcceEEeccccCCCCCccccccC--CCe
Q 007227 164 TNPNAPV-YPRLAQGKVWNEMTVTWTSGYGINEAEP-FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD--PGY 239 (612)
Q Consensus 164 ~~~~~P~-~~~La~~~~~~~m~V~W~T~~~~~~~~~-~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~--~g~ 239 (612)
.-|.+|. .+++ ...+.++++|.|...... .... .|+|.......... + ++. ....|.. ...
T Consensus 14 ~~P~~P~~~~~~-~~~~~~sv~L~W~~p~~~-g~~~Y~~~Y~~~~~~~~~~--~--------~~~---~~~~w~~~~~~~ 78 (127)
T 2dmk_A 14 TAPNPPSIREEL-CTASHDTITVHWISDDEF-SISSYELQYTIFTGQANFI--S--------LYN---SVDSWMIVPNIK 78 (127)
T ss_dssp SSCCCCEEEEEE-EEEETTEEEEEEECSCCS-SEEEEEEEEEEESCCSCHH--H--------HHH---TGGGSEEEEEEC
T ss_pred CCCcCCCCCCEE-EeeeCCEEEEEECCCCCC-CccceEEEEEEeccccccc--c--------ccc---CCCCcEEeeccc
Confidence 3466776 5555 333578999999987531 1123 67776411100000 0 000 0001110 000
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
-...+++||+|++.|.|||......|. .+|....++|++.+
T Consensus 79 ~~~~~v~gL~p~t~Y~frV~A~N~~G~-~~S~~v~~~T~~~~ 119 (127)
T 2dmk_A 79 QNHYTVHGLQSGTRYIFIVKAINQAGS-RNSEPTRLKTNSQP 119 (127)
T ss_dssp SSEEEEESCCSSCEEEEEEEEEESSCE-EECCCEEEECCSSC
T ss_pred CCeEEECCCCCCCEEEEEEEEEeCCCC-CCCcCeEeEeCCCc
Confidence 123478999999999999987755555 46788889997643
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.015 Score=50.79 Aligned_cols=95 Identities=9% Similarity=0.042 Sum_probs=57.0
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++. ..+.++++|+|........ ..-.|+|...+..... ...... .+.....
T Consensus 28 P~~P~~l~~~-~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~--~~~~~~-----------------~~~~~~~ 87 (130)
T 1wfo_A 28 PGPPMGILFP-EVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANT--ATVEVL-----------------APSARQY 87 (130)
T ss_dssp CCCCCCCEEE-EECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSC--CCEEEE-----------------CTTCCEE
T ss_pred CCCCCceEEE-ecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCce--EEEEEe-----------------CCCceEE
Confidence 4556556553 3357899999986532110 1235666544321100 000000 1234567
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
+|++|+|++.|.+||......|...||....|+|.+.
T Consensus 88 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 88 TATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 8899999999999999875556666788888998764
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.014 Score=50.30 Aligned_cols=93 Identities=13% Similarity=-0.024 Sum_probs=54.6
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCC--CC-CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYG--IN-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~--~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
.|.+|..|.+. ..+.++++|.|..... .. -..-.|+|...++..+...... ....-
T Consensus 10 ~p~~P~~P~v~-~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~--------------------~~~~~ 68 (112)
T 1bpv_A 10 PIDPPGKPVPL-NITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS--------------------NILEN 68 (112)
T ss_dssp CCCCCCCCEEE-EEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS--------------------CCCSS
T ss_pred CCCCCCCCEEE-EeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc--------------------cCccC
Confidence 35667777773 3457999999984321 11 1234678876544333221100 00112
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKAS 278 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~-~~~S~~~~F~T~ 278 (612)
..+++||+||+.|.|||......|. ..+|..-...|.
T Consensus 69 ~~~v~~L~p~t~Y~frV~A~N~~G~~s~~S~~~~~~t~ 106 (112)
T 1bpv_A 69 EFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITC 106 (112)
T ss_dssp EEEECSCCSSCCEEEEEEEECTTSCEEEEEEEEEEECS
T ss_pred EEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEe
Confidence 3568999999999999998754554 445655555543
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0053 Score=54.05 Aligned_cols=40 Identities=18% Similarity=0.305 Sum_probs=33.5
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
.++++||+|+|.|.+||......|...||+...++|.+.|
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 3678999999999999998765666678888999998754
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.027 Score=48.08 Aligned_cols=91 Identities=9% Similarity=0.031 Sum_probs=51.9
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCC--ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEA--EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~--~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
.|.+|...++ ...+.+++.++|......... .-.|+|..+.. ..... .-...
T Consensus 7 ~Ps~v~~l~v-~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--------~~~~~-----------------~~~t~ 60 (104)
T 2dle_A 7 GAIQVFDVTA-VNISATSLTLIWKVSDNESSSNYTYKIHVAGETD--------SSNLN-----------------VSEPR 60 (104)
T ss_dssp SCCBEEEEEE-EEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC--------EEEEE-----------------ESSSE
T ss_pred CCCCCceEEE-EEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC--------eEEEc-----------------CCCCE
Confidence 3444444444 344678999999866321111 23555553311 01100 01245
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
++|+||+|||.|.++|.... ++...-+....++|.|.|.
T Consensus 61 ~~i~gL~PgT~Y~~~V~A~~-~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 61 AVIPGLRSSTFYNITVCPVL-GDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp EECCSCCSSCEEEEEEEEES-SSCCCBCEEEEEECCCCSC
T ss_pred EEECCCCCCCEEEEEEEEEE-CCcccCCeeEEEEccCCCC
Confidence 78999999999999999863 2222223456778887653
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.013 Score=50.58 Aligned_cols=97 Identities=15% Similarity=0.075 Sum_probs=53.9
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCC-CCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKG-GDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
.-|.+|..+.+. ..+.++++|.|.-..+... ..-.|+|...+ ...+..... .. ++-.
T Consensus 16 ~~P~~P~~~~~~-~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~--~~-----------------~~~~ 75 (121)
T 1x4z_A 16 SPPEAPDRPTIS-TASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--AI-----------------PPSR 75 (121)
T ss_dssp CCCCCCCCCEEE-ECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--EE-----------------CTTC
T ss_pred CCCccCCCCEEE-EccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeec--cc-----------------CCCc
Confidence 456677777663 3457899999984322110 12356676543 222211100 00 1123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEY-QFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~-~F~T~p~ 280 (612)
...++++|+|++.|.|||......|...+|..- .+++.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~~ 116 (121)
T 1x4z_A 76 LSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCSS
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCCC
Confidence 456789999999999999876444433455433 3555443
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.013 Score=50.20 Aligned_cols=92 Identities=23% Similarity=0.366 Sum_probs=55.9
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCcc----EEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
-|.+|..+.+. ..+.++++|.|..... ...+ .|+|..... ..+. ..+. + ..
T Consensus 17 ~P~~P~~~~~~-~~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~-----~~~~------------~---~~- 72 (118)
T 1x3d_A 17 EPDIPNPPRIA-NRTKNSLTLQWKAPSD--NGSKIQNFVLEWDEGKGNGEFC-----QCYM------------G---SQ- 72 (118)
T ss_dssp CCCCCCCCEEE-EEETTEEEEECCCCCC--CSSCEEEEEEEECTTTSSSCCE-----EEEE------------E---SC-
T ss_pred CCcCCCCcEEe-ccCCCEEEEEECCCCC--CCCcceEEEEEEecCCCCCCeE-----Eeec------------c---CC-
Confidence 35566666552 3357899999987642 2223 344443322 1111 0111 0 11
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
...++++|+|++.|.|||......|...+|+...|+|.+.+
T Consensus 73 -~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 73 -KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp -SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred -cEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 34578999999999999987655566668888889887643
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.028 Score=47.05 Aligned_cols=91 Identities=9% Similarity=-0.066 Sum_probs=55.7
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++ ...+.++++|+|....... -..-.|+|...+...+. .... . ...+
T Consensus 8 P~~P~~l~~-~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~------~~~~---------------~--~~~~ 63 (106)
T 2ed8_A 8 PGPVENLQA-VSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQ------NIEV---------------D--GLSY 63 (106)
T ss_dssp CCCCEEEEE-ECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEE------EEEE---------------C--SSCE
T ss_pred CcCCceeEE-EecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceE------EEeC---------------C--ccEE
Confidence 455666655 3335789999998763210 11235566544322111 0000 0 1345
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
+|++|+|++.|.+||......|...+|+...|+|...
T Consensus 64 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 64 KLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 7899999999999998775555556788889998654
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.015 Score=50.27 Aligned_cols=89 Identities=15% Similarity=0.051 Sum_probs=54.6
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCC--C--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGI--N--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~--~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
+|..+++ ...+.++++|+|...... . -..-.|+|...+..... ... .+-....
T Consensus 31 ~P~~l~~-~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~ 87 (124)
T 2ed9_A 31 PPQNVSL-EVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEM-----ETL-----------------EPNNLWY 87 (124)
T ss_dssp CCBSCCE-EEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCE-----EEE-----------------CSSCSEE
T ss_pred CCeeeEE-EEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcce-----EEe-----------------cCCcCEE
Confidence 3545554 223578999999876421 0 11234566554332111 000 1223456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
+|++|+|++.|.+||......|...||....|+|+.
T Consensus 88 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 88 LFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 799999999999999877555666789999999864
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0069 Score=63.18 Aligned_cols=68 Identities=18% Similarity=0.225 Sum_probs=43.5
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC----------CCCEEEEcCccccCCCcccHHHHHHHhhhcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~----------~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 356 (612)
.+++++||+|.. ...+.++++... ++|.++++||++ +.|..+ .+....+..+
T Consensus 71 ~~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~v-drG~~s--~evl~~l~~l 132 (342)
T 2z72_A 71 KKVVALSDVHGQ---------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIF-DRGHQV--NEVLWFMYQL 132 (342)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCS-SSSSCH--HHHHHHHHHH
T ss_pred CCEEEEECCCCC---------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCc-CCCCCH--HHHHHHHHHH
Confidence 689999999843 234566665422 479999999999 445432 1222222222
Q ss_pred -----ccCCCeEEccCCCccC
Q 007227 357 -----ASTVPYMIASGNHERD 372 (612)
Q Consensus 357 -----~~~vP~~~~~GNHD~~ 372 (612)
....+++.+.||||..
T Consensus 133 ~~~~~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 133 DQQARDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HHHHHHTTCEEEECCCHHHHH
T ss_pred HHHHhhCCCeEEEEecCCcHH
Confidence 2235689999999963
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.96 E-value=0.032 Score=45.35 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=24.1
Q ss_pred EEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEc
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKA 277 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~-~~~S~~~~F~T 277 (612)
.++++|+||+.|+|||......|. ...|....++|
T Consensus 53 ~~~~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~v~T 88 (88)
T 1k85_A 53 ATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp EEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred EEeCCCCCCCEEEEEEEEEeCCCCcCCCCCCEEEEC
Confidence 468999999999999987643443 22345555544
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.015 Score=49.85 Aligned_cols=92 Identities=14% Similarity=0.139 Sum_probs=51.7
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCC---ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEA---EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++ ...+.++++|+|..... .. .-.|+|...+...+. .... ..+-..
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~~p~~--~g~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~~ 73 (118)
T 2yrz_A 17 VPDTPTRLVF-SALGPTSLRVSWQEPRC--ERPLQGYSVEYQLLNGGELH------RLNI--------------PNPAQT 73 (118)
T ss_dssp CCCCCCCCEE-CCCBTTEEEEECCCCCC--SSCEEEEEEEEEBSSSCCEE------EEEE--------------SCTTCC
T ss_pred CCCCCCceEE-EeCCCCEEEEEeCCCCC--CCCccEEEEEEEECCCCceE------EEEc--------------CCCCcC
Confidence 3455666654 33457899999987642 11 123444443221110 0000 011234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc-eEEEEcCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSS-EYQFKASP 279 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~-~~~F~T~p 279 (612)
.++|++|+|++.|.+||......|...||. ...++|.+
T Consensus 74 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~ 112 (118)
T 2yrz_A 74 SVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQV 112 (118)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCC
Confidence 567899999999999998775555555666 44444443
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.029 Score=47.97 Aligned_cols=40 Identities=20% Similarity=0.085 Sum_probs=32.8
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
..++|++|+|++.|.+||......|...||+...|+|.+.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 4568999999999999998775556667888889999754
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=95.88 E-value=0.044 Score=51.75 Aligned_cols=92 Identities=14% Similarity=0.120 Sum_probs=54.3
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCC------CCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYG------INEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~------~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
.+|..+.+ ...+.++++|+|..... .....-.|+|...+..... ..... +-.
T Consensus 6 ~~P~~l~~-~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~ 63 (211)
T 3p4l_A 6 MPPVGVQA-SILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK----YKNAN-----------------ATT 63 (211)
T ss_dssp CCCEEEEE-EECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CC----CEEEE-----------------ESS
T ss_pred CCCCCEEE-EecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcce----EEEeC-----------------CCc
Confidence 34555554 33457899999986421 0111245666654332110 00100 113
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
...+|++|+|++.|.+||......|...||....|+|.+.
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 4567899999999999998764445556788888998653
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=95.83 E-value=0.0088 Score=61.48 Aligned_cols=68 Identities=21% Similarity=0.254 Sum_probs=42.2
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccc--cCCCe
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~ 362 (612)
.+++++||+|.. ...+.++++.. ...+.++++||++ +.|..+ .+.+..+..+. ..-.+
T Consensus 50 ~~i~viGDIHG~---------------~~~L~~ll~~~~~~~~~~~vflGD~V-DRG~~s--~evl~lL~~lk~~~p~~v 111 (309)
T 2ie4_C 50 CPVTVCGDVHGQ---------------FHDLMELFRIGGKSPDTNYLFMGDYV-DRGYYS--VETVTLLVALKVRYRERI 111 (309)
T ss_dssp SSEEEECCCTTC---------------HHHHHHHHHHHCCTTTSCEEECSCCS-SSSTTH--HHHHHHHHHHHHHCTTTE
T ss_pred CCEEEEecCCCC---------------HHHHHHHHHHcCCCCCCEEEEeCCcc-CCCCCh--HHHHHHHHHHHhhCCCcE
Confidence 469999999843 23455565542 3467789999999 555433 12223332221 12358
Q ss_pred EEccCCCccC
Q 007227 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~~~GNHD~~ 372 (612)
+.+.||||..
T Consensus 112 ~~lrGNHE~~ 121 (309)
T 2ie4_C 112 TILRGNHESR 121 (309)
T ss_dssp EECCCTTSST
T ss_pred EEEeCCCCHH
Confidence 9999999975
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.023 Score=49.61 Aligned_cols=41 Identities=12% Similarity=0.067 Sum_probs=33.4
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
....+|++|+|++.|.+||......|...||....|+|.+.
T Consensus 76 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 76 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 45678899999999999998775555566888899999763
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.043 Score=46.22 Aligned_cols=92 Identities=13% Similarity=0.047 Sum_probs=51.0
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|...++. ..+.++++|+|.-... ...-.|+|...+...+.. ..... -++. .++|
T Consensus 9 ~~~P~~l~~~-~~~~~sv~lsW~~p~~--~~~Y~v~y~~~~~~~~~~---~~~~~---------------~~~~--~~~l 65 (104)
T 2dkm_A 9 LPPPRALTLA-AVTPRTVHLTWQPSAG--ATHYLVRCSPASPKGEEE---EREVQ---------------VGRP--EVLL 65 (104)
T ss_dssp CCCCCCCEEE-EECSSEEEEECCCCSS--CSEEEEEEEESSSCCSSC---CEEEE---------------ESSS--EEEE
T ss_pred CCCCceeEEE-ecCCCEEEEEEeCCCC--CCeEEEEEEECCCCCCcc---eEEEe---------------cCCC--EEEE
Confidence 4567666663 3356899999976532 123456666433211100 00000 0122 7889
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
+||+|+|.|.++|......+... .....++|.|.+
T Consensus 66 ~~L~p~t~Y~~~V~A~~~~~~s~-p~~~~~~T~p~~ 100 (104)
T 2dkm_A 66 DGLEPGRDYEVSVQSLRGPEGSE-ARGIRARTPTSG 100 (104)
T ss_dssp ESCCTTCCEEEEEEEECSSSBCC-CEEEECCCCCCS
T ss_pred CCCCCCCEEEEEEEEECCCCCCC-CEEEEEEcCCCC
Confidence 99999999999998763222111 123456676543
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.03 Score=48.77 Aligned_cols=41 Identities=15% Similarity=-0.167 Sum_probs=32.6
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|++.|.+||......|...||....|+|.+.
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 35678999999999999998765555556888888988754
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=95.74 E-value=0.039 Score=46.52 Aligned_cols=93 Identities=14% Similarity=0.073 Sum_probs=51.3
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|...++ ...+.+++.|+|.-... .-..-.|+|........ ...... ++-...++|
T Consensus 3 p~~P~~l~v-~~~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~~~~~l 60 (104)
T 2rb8_A 3 LDAPSQIEV-KDVTDTTALITWMPPSQ-PVDGFELTYGIKDVPGD---RTTIDL-----------------TEDENQYSI 60 (104)
T ss_dssp CCCCEEEEE-ESCCSSCEEEEEECCSS-CCSEEEEEEEETTCTTC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCccEE-EEecCCeEEEEEcCCCC-ccceEEEEEEECcCCCc---eEEEEc-----------------CCCcCEEEe
Confidence 456766665 33467899999976532 11223567754321110 000111 112235689
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
+||+||+.|.++|......|... .....|+|.+..
T Consensus 61 ~~L~p~t~Y~~~V~A~~~~g~s~-p~~~~~~T~~~~ 95 (104)
T 2rb8_A 61 GNLKPDTEYEVSLISRRGDMSSN-PAKETFTTGLAA 95 (104)
T ss_dssp CSCCTTCEEEEEEEEEETTEECC-CEEEEEECCC--
T ss_pred CCCCCCCEEEEEEEEEeCCccCC-CEEEEEECCCCc
Confidence 99999999999998763333211 234568887654
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=95.73 E-value=0.067 Score=59.11 Aligned_cols=129 Identities=15% Similarity=0.137 Sum_probs=70.9
Q ss_pred EEEEEEeecc--cceEEEEEecC---CCCcEEEEeccceec-cCCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccE
Q 007227 128 SLKLQLINQR--SDFSFVLFTNG---LLNPKVVAVSNKVTF-TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPF 199 (612)
Q Consensus 128 ~~~~~l~n~r--~~~~f~~~~~~---~~~p~~~a~s~~~~~-~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~ 199 (612)
..++.|-+.+ ..|.|.+.... ...| -..|..+.+ +.+.+|..+.+ ...+.++++|+|........ ..-.
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sp--s~~s~~v~v~T~~~~Ps~~~~-~~~s~tSV~LsW~pP~~~ng~I~~Y~ 475 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVT--SRSFRTASVSINQTEPPKVRL-EGRSTTSLSVSWSIPPPQQSRVWKYE 475 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCS--CCCEEEEEEECCSCCCCEEEE-EECCC-CCEEEEECCTTTTTTCSEEE
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCC--CCccceeEEeecccCCCCCce-eeccCCeEEEEEECCcCCCCcccEEE
Confidence 3445555655 46777776542 1111 011222222 24556777766 45567999999986532110 1235
Q ss_pred EEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 200 VEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 200 V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
|+|...+... ...... +-...++|+||+|+|.|.+||......|...||+...|+|.+
T Consensus 476 V~y~~~~~~~-----~~~~v~-----------------~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~ 533 (536)
T 3fl7_A 476 VTYRKKGDSN-----SYNVRR-----------------TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS 533 (536)
T ss_dssp EEEEEC--CC-----CCEEEE-----------------ESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC
T ss_pred EEEEECCCCc-----eEEEEc-----------------CCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCC
Confidence 6676543320 001111 112356799999999999999877555666789999999987
Q ss_pred CC
Q 007227 280 YP 281 (612)
Q Consensus 280 ~~ 281 (612)
..
T Consensus 534 ~~ 535 (536)
T 3fl7_A 534 PE 535 (536)
T ss_dssp --
T ss_pred CC
Confidence 53
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=95.69 E-value=0.15 Score=52.33 Aligned_cols=40 Identities=18% Similarity=0.066 Sum_probs=31.1
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
...+|++|+|++.|.+||......|...+|.. .|+|++.|
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~-~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTVY-EFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE-EEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCceee-EecCCCCC
Confidence 45678999999999999997754555556654 89998876
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.66 E-value=0.028 Score=48.91 Aligned_cols=98 Identities=15% Similarity=0.100 Sum_probs=54.8
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccC---CCCCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPK---GGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~---~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
-|.+|..+.+ .....++++|.|.-..+.. -..-.|+|... +...+... ... . ..+.
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~-----~~~-~------------~~~~ 77 (124)
T 1wis_A 17 LPGPPTNLGI-SNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI-----HQL-S------------NEPD 77 (124)
T ss_dssp CCCCCEEEEE-ESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEE-----EEE-E------------SCTT
T ss_pred CCccCCCCEE-EEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEe-----eeE-c------------cCCC
Confidence 4555655555 3346789999996553211 01235667652 11111110 000 0 0112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSE-YQFKASPYP 281 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~-~~F~T~p~~ 281 (612)
...+++++|+|++.|.+||......|...+|.. ..++|.+.+
T Consensus 78 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 78 ARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp CSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred ceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 345688999999999999987754455555653 457777653
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=95.64 E-value=0.014 Score=55.16 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=56.3
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCC--C-CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGI--N-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~--~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+.... .+++|+|...... . -..-.|+|...+...+.. ..+... ..+...
T Consensus 8 ~P~~P~~~~~~~~~--~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~----~~~~~~-------------~~~~~~ 68 (209)
T 2vkw_A 8 TPSSPSIDQVEPYS--STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS----KWYDAK-------------EASMEG 68 (209)
T ss_dssp CCCCCEEEEEEECS--SCEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEE----EEEEHH-------------HHHHHS
T ss_pred CCcCCcccEeeecc--CeEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceE----eEeecc-------------CCCccc
Confidence 45667666653332 3699999876321 1 122356666544322211 111100 001123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
..++++|+|++.|.|||......|...+|....|+|.+.
T Consensus 69 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 69 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred eEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 567899999999999998765445556778888998764
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.62 E-value=0.012 Score=60.99 Aligned_cols=67 Identities=18% Similarity=0.200 Sum_probs=42.3
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhcc--ccCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP~~ 363 (612)
+++++||+|.. ...+.++++.. ...+-++++||++ +.|..+. +.+..+..+ ...-.++
T Consensus 58 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vflGD~V-DRG~~s~--evl~lL~~lk~~~p~~v~ 119 (330)
T 1fjm_A 58 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYV-DRGKQSL--ETICLLLAYKIKYPENFF 119 (330)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCS-SSSSCHH--HHHHHHHHHHHHSTTTEE
T ss_pred ceEEecCCCCC---------------HHHHHHHHHHhCCCCcceEEeCCCcC-CCCCChH--HHHHHHHHhhhhcCCceE
Confidence 58999999843 34566666652 3457799999999 5565331 222322222 1223589
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 120 ~lrGNHE~~ 128 (330)
T 1fjm_A 120 LLRGNHECA 128 (330)
T ss_dssp ECCCTTSSH
T ss_pred EecCCchHh
Confidence 999999964
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.58 E-value=0.018 Score=59.70 Aligned_cols=68 Identities=18% Similarity=0.281 Sum_probs=42.2
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCC---CCEEEEcCccccCCCcccHHHHHHHhhhcc--ccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~---pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP 361 (612)
.|++++||+|.. ...+.++++.... -+.++++||++ ++|..+ .+.+..+..+ ...-.
T Consensus 64 ~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~V-DRG~~s--~evl~lL~~lk~~~p~~ 125 (335)
T 3icf_A 64 VKISVCGDTHGQ---------------FYDVLNLFRKFGKVGPKHTYLFNGDFV-DRGSWS--CEVALLFYCLKILHPNN 125 (335)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTEEEEECSCCS-SSSTTH--HHHHHHHHHHHHHCTTT
T ss_pred ceEEEEecCCCC---------------HHHHHHHHHHcCCCCCCcEEEEeCCcc-CCCcCh--HHHHHHHHHHhhhCCCc
Confidence 689999999853 3456666665332 24699999999 555433 1222222221 11235
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
++.+.||||..
T Consensus 126 v~llrGNHE~~ 136 (335)
T 3icf_A 126 FFLNRGNHESD 136 (335)
T ss_dssp EEECCCTTSSH
T ss_pred EEEecCchhhh
Confidence 88999999953
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.56 E-value=0.053 Score=46.43 Aligned_cols=92 Identities=13% Similarity=0.055 Sum_probs=52.1
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|...++ ...+.+++.|+|.-... .-..-.|+|...++... .... ++-...++
T Consensus 7 ~p~~P~~l~~-~~~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~-----~~~v-----------------~~~~t~~~ 62 (115)
T 2cuh_A 7 GPDGPTQLRA-LNLTEGFAVLHWKPPQN-PVDTYDIQVTAPGAPPL-----QAET-----------------PGSAVDYP 62 (115)
T ss_dssp CCSSCEEEEC-CCCSSSCEEEEEECCSS-CCSEEEEEEECSSSCCE-----EEEE-----------------ETTCSEEE
T ss_pred CCCCCcceEE-EeccCCeEEEEEECCCC-CccEEEEEEEcCCCCcE-----EEEE-----------------CCCccEEE
Confidence 4566765554 23357999999976532 11223466654332110 0110 11224578
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
|+||+|+|.|.++|......+... .....|+|.+.+
T Consensus 63 l~~L~P~t~Y~~~V~A~~~~~~s~-~~~~~~~T~~~~ 98 (115)
T 2cuh_A 63 LHDLVLHTNYTATVRGLRGPNLTS-PASITFTTGLEA 98 (115)
T ss_dssp ECSCCSSSEEEEEEEEEETTEECC-CEEEEEESCCCC
T ss_pred EeCCCCCCEEEEEEEEEeCCCcCC-CEEEEEEeCCCC
Confidence 999999999999998763222111 234678887543
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.55 E-value=0.07 Score=46.23 Aligned_cols=39 Identities=23% Similarity=0.210 Sum_probs=31.3
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
.++|++|+|+|.|.+||......|...+|....|+|.|.
T Consensus 68 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 68 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCC
Confidence 567899999999999998765455556788888887764
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.54 E-value=0.051 Score=45.36 Aligned_cols=79 Identities=11% Similarity=0.119 Sum_probs=46.2
Q ss_pred CCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEE
Q 007227 179 VWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTY 256 (612)
Q Consensus 179 ~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Y 256 (612)
+.++++|.|....... -..-.|+|...+...+.. .... .-....+|++|+|++.|.+
T Consensus 19 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~~-----------------~~~~~~~i~~L~p~t~Y~~ 77 (107)
T 2dn7_A 19 AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNT----IDFG-----------------KDDQHFTVTGLHKGTTYIF 77 (107)
T ss_dssp STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEE----EEEE-----------------TTCCEEEEECCCTTCEEEE
T ss_pred CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEE----EEeC-----------------CCccEEEeCCCCCCCEEEE
Confidence 6789999998764211 112356666543322111 1111 1123567899999999999
Q ss_pred EEeeecCCCCccccceEEEEcCC
Q 007227 257 KLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 257 rv~~~~~~g~~~~S~~~~F~T~p 279 (612)
||......|...+|. ..|+|..
T Consensus 78 ~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 78 RLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEEETTEEEEEEE-EEEECCC
T ss_pred EEEEEcCCcccCCee-eEEeCCC
Confidence 998764444444555 4577753
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.53 E-value=0.2 Score=49.53 Aligned_cols=103 Identities=14% Similarity=0.066 Sum_probs=55.6
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|..+.+. ..+.++++|.|....+ ....-.|+|...++.... .... .+......|
T Consensus 113 ~~~P~~l~~~-~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~~~~~i 169 (290)
T 3r8q_A 113 VSPPRRARVT-DATETTITISWRTKTE-TITGFQVDAVPANGQTPI----QRTI-----------------KPDVRSYTI 169 (290)
T ss_dssp CCCCEEEEEE-EECSSCEEEEEECCSC-CCCEEEEEEEESSSCCCE----EEEE-----------------CTTCSEEEE
T ss_pred CCCCceeEEE-EcCCCeEEEEEeCCCC-cccEEEEEEEECCCCcce----EEec-----------------CCCccEEEE
Confidence 4566655553 3357899999987632 122346666654322110 0111 111234678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEec
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGD 294 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
+||+|++.|.++|......|... .....++|.|.+. ..+++...++
T Consensus 170 ~~L~p~t~Y~~~V~A~n~~g~s~-~~~~~~~t~p~~P--~~l~~~~~~~ 215 (290)
T 3r8q_A 170 TGLQPGTDYKIYLYTLNDNARSS-PVVIDASTAIDAP--SNLRFLATTP 215 (290)
T ss_dssp CSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCC--EEEEEEEEET
T ss_pred CCCCCCCEEEEEEEEEeCCcccC-CEEEEecCCCCCC--CccEEEeeCC
Confidence 99999999999998753222211 1234556665432 2355554443
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.49 E-value=0.034 Score=47.62 Aligned_cols=93 Identities=17% Similarity=0.208 Sum_probs=52.9
Q ss_pred CCCCCCcc--eeeecCCCCcEEEEEEeCCCCCCCccE----EEEccCCCCCccccCcceEEeccccCCCCCccccccCCC
Q 007227 165 NPNAPVYP--RLAQGKVWNEMTVTWTSGYGINEAEPF----VEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPG 238 (612)
Q Consensus 165 ~~~~P~~~--~La~~~~~~~m~V~W~T~~~~~~~~~~----V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 238 (612)
.|.+|..+ .+ ...+.++++|.|.-... ...+. |+|...+ ..+.. ... ..++
T Consensus 17 ~P~~P~~~~~~~-~~~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~-~~~~~------~~~-------------~~~~ 73 (121)
T 1wf5_A 17 LPHAPEHPVATL-STVERRAINLTWTKPFD--GNSPLIRYILEMSENN-APWTV------LLA-------------SVDP 73 (121)
T ss_dssp CCCCCSSCEEEE-CSSSTTEEEEECCCCCC--CSSCEEEEEEEEECTT-CCCEE------EES-------------SCCT
T ss_pred CCccCCCcceee-EeccCCEEEEEEcCCCC--CCCcceEEEEEEEcCC-CCceE------eEc-------------ccCC
Confidence 46677766 44 33357899999976532 22233 4444332 11110 000 0012
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCCC
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEY-QFKASPY 280 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~-~F~T~p~ 280 (612)
-....+++||+|++.|.+||......|...+|..- .++|++.
T Consensus 74 ~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 74 KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp TCCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred CccEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 23456789999999999999977545555566553 4666654
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.027 Score=47.59 Aligned_cols=84 Identities=13% Similarity=0.014 Sum_probs=46.1
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCcc----EEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
|.+|..+.+. ..+.++++|.|...... ...+ .|+|...+...+..... .+....
T Consensus 8 P~~P~~l~~~-~~~~~sv~l~W~~p~~~-g~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~ 65 (110)
T 2yuw_A 8 TSPPTLLTVD-SVTDTTVTMRWRPPDHI-GAAGLDGYVLEYCFEGTEDWIVANK--------------------DLIDKT 65 (110)
T ss_dssp SCCCEEEEEE-EECSSCEEEEEECCSSC-CSSCEEEEEEEEEETTCSSEEECCS--------------------SCCCSS
T ss_pred CCCCCccEEE-eccCCeEEEEECCCCCC-CCCCccEEEEEEEECCCccceEecc--------------------ccCccC
Confidence 4556555542 33578999999875421 1122 45555443322211100 011123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSS 271 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~ 271 (612)
..++++|+|++.|.|||......|...+|.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 95 (110)
T 2yuw_A 66 KFTITGLPTDAKIFVRVKAVNAAGASEPKY 95 (110)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCCCCcC
Confidence 457899999999999998764334333443
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.45 E-value=0.018 Score=49.20 Aligned_cols=94 Identities=16% Similarity=0.131 Sum_probs=51.7
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+. ..+.++++|.|....... -..-.|+|...+. ..+... .. .....
T Consensus 15 ~P~~P~~~~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-----~~----------------~~~~~ 72 (117)
T 1uem_A 15 LPGPPSKPQVT-DVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTV-----AN----------------HVKTT 72 (117)
T ss_dssp SCBCCCCCEEE-EECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEE-----EE----------------EECSS
T ss_pred CccCCCCCEEE-EecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEc-----cc----------------ccCcC
Confidence 45566666663 345789999997653211 0113455554321 111100 00 00112
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEE-EEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQ-FKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~-F~T~p~ 280 (612)
..++++|+|++.|.|||......|...+|..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 457899999999999998764444444555444 666654
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.38 E-value=0.086 Score=50.75 Aligned_cols=100 Identities=14% Similarity=0.028 Sum_probs=55.2
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++. ..+.++++|.|.-..... -..-.|+|...++...... ...... ........
T Consensus 98 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-~~~~~~--------------~~~~~~~~ 161 (234)
T 3f7q_A 98 VPSEPGRLAFN-VVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIG-PMKKVL--------------VDNPKNRM 161 (234)
T ss_dssp CCCCCCCCEEE-ECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSS-CCEECC--------------CSCTTCCE
T ss_pred CCCCCCccEEE-EecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccC-cceEEE--------------ecCCcceE
Confidence 35556666553 345789999998653211 0123566665433211100 000000 00112345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccc-eEEEEcCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSS-EYQFKASPY 280 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~-~~~F~T~p~ 280 (612)
.+|+||+|++.|.+||......|...+|. ...|+|.+.
T Consensus 162 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 162 LLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp EEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred EEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCC
Confidence 67999999999999998765445445665 467887654
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=95.37 E-value=0.019 Score=58.97 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=41.7
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC---CCCEEEEcCccccCCCcccHHHHHHHhhhcc--ccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~---~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP 361 (612)
.|++++||+|.. ...+.++++... ..+.++++||++ +.|..+ .+-...+..+ ...-.
T Consensus 60 ~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~V-DRG~~s--~evl~lL~~lk~~~p~~ 121 (315)
T 3h63_A 60 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFV-DRGSFS--VEVILTLFGFKLLYPDH 121 (315)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCS-SSSTTH--HHHHHHHHHHHHHSTTT
T ss_pred ceEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCcc-CCCcCh--HHHHHHHHHhhhhcCCc
Confidence 689999999853 344566666532 235699999999 555432 1222222221 11235
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
++.+.||||..
T Consensus 122 v~~lrGNHE~~ 132 (315)
T 3h63_A 122 FHLLRGNHETD 132 (315)
T ss_dssp EEEECCTTSSH
T ss_pred EEEEecCcccc
Confidence 88999999964
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.09 Score=44.97 Aligned_cols=91 Identities=14% Similarity=0.115 Sum_probs=51.9
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
.+|...++ ...+.++++|+|..... .-..-.|+|...++.... .... ++-...+.|+
T Consensus 9 ~pP~~l~~-~~vt~tsi~vsW~pp~~-~i~~Y~I~y~~~~~~~~~----~~~v-----------------~~~~t~~~l~ 65 (108)
T 2ee3_A 9 APPRHLGF-SDVSHDAARVFWEGAPR-PVRLVRVTYVSSEGGHSG----QTEA-----------------PGNATSAMLG 65 (108)
T ss_dssp CCSSCEEE-ESCCSSCEEEEESCCSS-CCSEEEEEEEETTTCCBC----CEEE-----------------ETTCCEEEEC
T ss_pred CCCceEEE-EEccCCeEEEEeeCCCC-CccEEEEEEEeCCCCcee----EEEc-----------------CCCcCEEEcC
Confidence 45666665 34468999999976532 122346777654332110 0110 1122457899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
||+|+|.|..+|..-...|...-+ ...|+|.+.|
T Consensus 66 ~L~p~T~Y~v~V~A~~~~g~s~p~-~~~~~T~~vP 99 (108)
T 2ee3_A 66 PLSSSTTYTVRVTCLYPGGGSSTL-TGRVTTKKAP 99 (108)
T ss_dssp SCCSSCEEEEEEEEECTTSCEEEE-EEEEECCCCC
T ss_pred CCCCCCEEEEEEEEEeCCCcCCCc-cCEEEeCCCC
Confidence 999999999999875333322212 3468887433
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.28 E-value=0.19 Score=54.31 Aligned_cols=143 Identities=11% Similarity=0.157 Sum_probs=77.7
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHH----------hcCCCCEEEEcCccccCCCc------------
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ----------DLKNIDIVFHIGDICYANGY------------ 342 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~----------~~~~pdfvl~~GDi~Y~~g~------------ 342 (612)
...++++++|++.+.... .+ ...++.+...+. ...++.-+|++||.+...+.
T Consensus 199 ~~~~ialVSGL~igs~~~--~~----~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~ 272 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGG--ES----LLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLT 272 (476)
T ss_dssp SCCEEEEECCCCBTSSCH--HH----HHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CH
T ss_pred CCCEEEEECCcccCCCcc--cc----hHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccc
Confidence 346899999999986310 00 011222222221 12568899999999965321
Q ss_pred -------ccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccccc---ccccCCCCCCceEEEEE
Q 007227 343 -------ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN---MFYVPTENRAKFWYSTD 412 (612)
Q Consensus 343 -------~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~---~f~~P~~~~~~~yYsfd 412 (612)
..+.+++.+.+..+...+|+.++|||||-.... -....-.+|-.+-.. .+..- .|. |.|+
T Consensus 273 ~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~-----lPQqplh~~lfp~s~~~~~~~~v----tNP-~~~~ 342 (476)
T 3e0j_A 273 KKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYT-----LPQQPLHPCMFPLATAYSTLQLV----TNP-YQAT 342 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSS-----SSCCCCCTTSCHHHHTSTTEEEC----CSS-EEEE
T ss_pred cccchhhHHHHHHHHHHHHhcccCceEEecCCCCCccccc-----CCCCCcCHHHhhhhhhcCccEEe----CCC-eEEE
Confidence 023344455566677899999999999964210 001111112111101 11111 222 4689
Q ss_pred eCCEEEEEEcCCC--C---CCCCHHHHHHHHHHHhh
Q 007227 413 YGMFRFCIADTEQ--D---WREGTEQYRFIEHCLAS 443 (612)
Q Consensus 413 ~G~v~Fi~LDT~~--~---~~~g~~Q~~WL~~~L~~ 443 (612)
+++++|++..... + +.+.+.-++.|++.|+-
T Consensus 343 i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 343 IDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp ETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred ECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 9999998776432 1 12233457788888875
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=95.25 E-value=0.02 Score=58.48 Aligned_cols=67 Identities=18% Similarity=0.200 Sum_probs=41.6
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhcc--ccCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP~~ 363 (612)
+++++||+|.. ...+.++++.. ...+-++++||++ +.|..+. +....+..+ ...-.++
T Consensus 57 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vfLGD~V-DrG~~s~--evl~lL~~lk~~~p~~v~ 118 (299)
T 3e7a_A 57 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYV-DRGKQSL--ETICLLLAYKIKYPENFF 118 (299)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCS-SSSSCHH--HHHHHHHHHHHHSTTTEE
T ss_pred CEEEEecCCCC---------------HHHHHHHHHHhCCCCCccEEeCCccc-CCCCCcH--HHHHHHHHHHhhCCCcEE
Confidence 48999999853 34566666653 3457788999999 5554321 222222211 1223589
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 119 ~lrGNHE~~ 127 (299)
T 3e7a_A 119 LLRGNHECA 127 (299)
T ss_dssp ECCCTTSSH
T ss_pred EEecCchhh
Confidence 999999964
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.23 E-value=0.11 Score=43.73 Aligned_cols=91 Identities=20% Similarity=0.187 Sum_probs=51.6
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|...++ ...+.+++.|+|.-... .-..-.|+|...++. .. ... .++-...++
T Consensus 7 ~p~~P~~l~v-~~~~~~sv~lsW~~p~~-~i~~Y~i~y~~~~~~-~~------~~~---------------~~~~~ts~~ 62 (105)
T 2cum_A 7 GLEAPRDLEA-KEVTPRTALLTWTEPPV-RPAGYLLSFHTPGGQ-TQ------EIL---------------LPGGITSHQ 62 (105)
T ss_dssp TCCCCEEEEE-ESCCSSCEEEEEECCSS-CCSEEEEEEECTTSC-EE------EEE---------------ECSSCSEEE
T ss_pred CCCCCCceEE-EeccCCEEEEEEcCCCC-ccceEEEEEEeCCCc-eE------EEE---------------ECCCccEEE
Confidence 4556666555 23357899999976532 111235667643321 10 000 011234578
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
|+||+|++.|.++|......|... .....|+|...
T Consensus 63 l~~L~p~t~Y~~~V~A~~~~g~s~-~~~~~~~T~~~ 97 (105)
T 2cum_A 63 LLGLFPSTSYNARLQAMWGQSLLP-PVSTSFTTGGL 97 (105)
T ss_dssp ECSCCTTCEEEEEEEEEBTTBCCC-CEEEEEECCCS
T ss_pred ECCCCCCCEEEEEEEEEeCCcccC-CEEEEEEeCCc
Confidence 999999999999998763222211 23567887643
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.18 E-value=0.054 Score=48.70 Aligned_cols=40 Identities=18% Similarity=0.008 Sum_probs=31.9
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
..++|+||+|+|.|..||......|...+|+...|+|++.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 5678999999999999998764344455788889999864
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.11 E-value=0.096 Score=50.41 Aligned_cols=90 Identities=17% Similarity=0.193 Sum_probs=55.2
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
.+|..+.+ ...+.++++|+|.-..+ ....-.|+|...++.... ..... +.....+|+
T Consensus 7 ~~P~~l~~-~~~~~~si~l~W~~p~g-~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~~~i~ 63 (234)
T 3f7q_A 7 GAPQNPNA-KAAGSRKIHFNWLPPSG-KPMGYRVKYWIQGDSESE----AHLLD-----------------SKVPSVELT 63 (234)
T ss_dssp CCCEEEEE-EECSSSCEEEEEECCSS-CCCEEEEEEEETTSCGGG----CEEEE-----------------ESSSEEEEC
T ss_pred CCCcceEE-EEcCCCEEEEEEECCCC-ccceEEEEEEECCCCccc----eEEEc-----------------CCccEEEEC
Confidence 45655555 33457899999987632 222345677654332111 01110 112356789
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
+|+|++.|.++|......|...+|....|+|..
T Consensus 64 ~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 64 NLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp SCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCC
Confidence 999999999999876444555577788898874
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=95.09 E-value=0.2 Score=49.41 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=30.8
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
...+|+||+||+.|.++|......| ..+|....|+|++
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEeecCC
Confidence 3567999999999999998764445 4578899999975
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=95.08 E-value=0.23 Score=50.84 Aligned_cols=92 Identities=18% Similarity=0.238 Sum_probs=51.8
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
.-|.+|..+.+. ..+.+++.|.|..... ....-.|+|...++... ...... ++-....
T Consensus 274 t~p~~P~~l~~~-~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~ 331 (368)
T 1fnf_A 274 TVSDVPRDLEVV-AATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTA 331 (368)
T ss_dssp CCCCSCEEEEEE-EEETTEEEEEEECCSS-CCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCCEE
T ss_pred CCCCCCCeeEEE-ecCCCEEEEEeeCCCC-ccceEEEEEEECCCCCc---cEEEEc-----------------CCCeeEE
Confidence 345566555542 2356899999987643 11234566665433210 001111 1123456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccc---eEEEEc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSS---EYQFKA 277 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~---~~~F~T 277 (612)
+++||+||+.|.|+|......|...+|. ..+|+|
T Consensus 332 ~~~~L~p~t~Y~~~V~A~~~~G~g~~s~~~~~i~~~T 368 (368)
T 1fnf_A 332 TISGLKPGVDYTITVYAVTGRGDSPASSKPISINYRT 368 (368)
T ss_dssp EECSCCTTCCEEEEEEEECCCSSSCCBCCCEEEEECC
T ss_pred EecCCCCCCEEEEEEEEeCCCCcCcccCceeeeeeeC
Confidence 7899999999999998775445444543 344543
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.01 E-value=0.066 Score=46.37 Aligned_cols=40 Identities=13% Similarity=0.003 Sum_probs=33.3
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
.++|++|+|++.|.+||......|...||+...|+|++..
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 5578999999999999987755566678999999998753
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.12 Score=45.07 Aligned_cols=41 Identities=12% Similarity=0.010 Sum_probs=33.3
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|..+|..-...|...+|+...|+|+..
T Consensus 74 ~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred cCEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCC
Confidence 35678999999999999998765456667888899999754
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=94.97 E-value=0.13 Score=43.11 Aligned_cols=91 Identities=14% Similarity=0.129 Sum_probs=51.4
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCC--CC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYG--IN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~--~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
+|....+ -..+.+++.|+|..... .+ -..-.|.|...+...... ....+.. +-...+
T Consensus 7 ~P~~~~~-~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~-~~~~~v~-----------------~~~~~~ 67 (102)
T 3n1f_C 7 GPHIAYT-EAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSD-YKRDVVE-----------------GSKQWH 67 (102)
T ss_dssp CCEEEEE-EECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGG-CEEEEEE-----------------TTCSEE
T ss_pred CCceeEE-EEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCc-eEEEEEc-----------------CCceEE
Confidence 3444443 23457899999987531 00 012357777654321000 0011111 111245
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
+|++|+|+|.|..+|..-...|....|....++|
T Consensus 68 ~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 68 MIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred ECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 8999999999999998764445556677777777
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=94.97 E-value=0.25 Score=46.55 Aligned_cols=95 Identities=15% Similarity=0.110 Sum_probs=56.0
Q ss_pred CCCCCCcceeeecC-----CCCcEEEEEEeCCCCCC--CccEEEEc-cCCCCCccccCcceEEeccccCCCCCccccccC
Q 007227 165 NPNAPVYPRLAQGK-----VWNEMTVTWTSGYGINE--AEPFVEWG-PKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (612)
Q Consensus 165 ~~~~P~~~~La~~~-----~~~~m~V~W~T~~~~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 236 (612)
.|.+|..+.+.... ..++++|+|........ -.-.|+|. ..+...+... ...
T Consensus 108 ~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~---~~~----------------- 167 (215)
T 1cd9_B 108 KLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLV---FHL----------------- 167 (215)
T ss_dssp CCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEE---EEE-----------------
T ss_pred EeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEE---ecc-----------------
Confidence 46677666554321 47889999987532000 12356666 4333222110 000
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCC
Q 007227 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASP 279 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~---~~S~~~~F~T~p 279 (612)
.+......|.+|+|+++|..||......|.. .||+...|+|+.
T Consensus 168 ~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 1123567899999999999999876433332 477888898864
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=94.96 E-value=0.026 Score=58.93 Aligned_cols=67 Identities=19% Similarity=0.270 Sum_probs=41.3
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccc--cCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~~ 363 (612)
+++++||+|.. ...+.++++.. ...+-++++||++ ++|..+. +-...+..+. ..-.++
T Consensus 71 pi~ViGDIHG~---------------~~dL~~ll~~~g~~~~~~~vfLGD~V-DRG~~s~--Evl~lL~~lk~~~p~~v~ 132 (357)
T 3ll8_A 71 PVTVCGDIHGQ---------------FFDLMKLFEVGGSPANTRYLFLGDYV-DRGYFSI--ECVLYLWALKILYPKTLF 132 (357)
T ss_dssp SEEEECCCTTC---------------HHHHHHHHHHHCCTTTCCEEECSCCS-SSSTTHH--HHHHHHHHHHHHCTTTEE
T ss_pred cceeeccCCCC---------------HHHHHHHHHhcCCCCCcEEEECCCcc-CCCcChH--HHHHHHHHhhhhcCCcEE
Confidence 48999999853 33455566542 3467899999999 5554331 2222222211 123478
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 133 llrGNHE~~ 141 (357)
T 3ll8_A 133 LLRGNHECR 141 (357)
T ss_dssp ECCCTTSSH
T ss_pred EEeCchhhh
Confidence 999999964
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.91 E-value=0.15 Score=42.44 Aligned_cols=74 Identities=20% Similarity=0.234 Sum_probs=44.4
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+.+. ..+.++++|+|.-... .-..-.|+|...+..... .... .++-.-.++|
T Consensus 2 p~~P~~l~~~-~~~~~sv~lsW~pP~~-~i~~Y~v~y~~~~~~~~~---~~~~-----------------~~~~~t~~~i 59 (100)
T 3b83_A 2 LQPPFNIKVT-NITLTTAVVTWQPPIL-PIEGILVTFGRKNDPSDE---TTVD-----------------LTSSITSLTL 59 (100)
T ss_dssp CCCCEEEEEE-SCCSSCEEEEEECCSS-CCSEEEEEEEESSCTTTC---EEEE-----------------ECTTEEEEEE
T ss_pred CccCCccEEE-EecCCEEEEEEcCCcc-cCCEEEEEEEECCCCCCc---eEEE-----------------ECCcceEEEE
Confidence 4456666653 3457899999986632 112245677644321100 0000 0123456789
Q ss_pred cCCCCCCEEEEEEeee
Q 007227 246 RELWPNAMYTYKLGHR 261 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (612)
+||+|+|.|.+||...
T Consensus 60 ~~L~p~t~Y~~~V~A~ 75 (100)
T 3b83_A 60 TNLEPNTTYEIRIVAR 75 (100)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999876
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.88 E-value=0.067 Score=45.23 Aligned_cols=85 Identities=14% Similarity=0.082 Sum_probs=46.1
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+. ..+.++++|+|.-..... -..-.|+|...+...+..... .+.-..
T Consensus 8 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~ 66 (111)
T 1x5y_A 8 PTSAPQHLTVE-DVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK--------------------EPVERC 66 (111)
T ss_dssp CCCCCEEEEEE-EECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS--------------------SCBSSS
T ss_pred CCcCCCCCEEE-eccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccc--------------------cCCccc
Confidence 34555555542 335789999998754211 112345665443322211100 011123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcccc
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWS 270 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S 270 (612)
..++++|+|++.|.|||......|...+|
T Consensus 67 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S 95 (111)
T 1x5y_A 67 GFTVKDLPTGARILFRVVGVNIAGRSEPA 95 (111)
T ss_dssp EEEEECCCTTCCEEEEEEEEETTEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCCCCc
Confidence 45789999999999999976433333334
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.85 E-value=0.15 Score=43.94 Aligned_cols=82 Identities=16% Similarity=0.349 Sum_probs=41.9
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCcc----EEEEccCC-CCCccccCcceEEeccccCCCCCcccccc-CCCeEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKG-GDRTYSPAGTLTFGRGSMCGAPARTVGWR-DPGYIH 241 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~-~~g~~h 241 (612)
.|..|.+ ...+.++++|.|.-+.. ...+ .|+|...+ ...+........+... -|. ..+-..
T Consensus 5 pP~~P~v-~~~~~~sv~L~W~~P~~--~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~----------~~~~~~~~~~ 71 (115)
T 2ic2_A 5 PPTPPNV-TRLSDESVMLRWMVPRN--DGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP----------KWNSELGKSF 71 (115)
T ss_dssp CCCCCEE-EECC---EEEEEEEECC--SSCCEEEEEEEEEECC---CCEEEEEEEECCSC----------SCSSSSEEEE
T ss_pred CCCcCEe-EEEeCCEEEEEEcCCCC--CCCCCceEEEEEEECCCCCCceECccccccccc----------ccccccCcee
Confidence 3444554 34467999999987643 2233 45565542 2222221111111100 000 123345
Q ss_pred EEEecCCCCCCEEEEEEeeec
Q 007227 242 TGFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
.++++||+|++.|.+||....
T Consensus 72 ~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 72 TASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEECSCCSSEEEEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEEEe
Confidence 678999999999999998763
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.78 E-value=0.18 Score=43.39 Aligned_cols=96 Identities=15% Similarity=0.117 Sum_probs=50.8
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCcc---ccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTY---SPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~---~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
+|...++ ...+.++++|+|....+ .-..-.|+|....+.... ......... -++-...++
T Consensus 11 ~p~~L~v-~~~T~~Si~LsW~~p~g-~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~---------------v~~~~t~~~ 73 (112)
T 2cui_A 11 RLSQLSV-TDVTTSSLRLNWEAPPG-AFDSFLLRFGVPSPSTLEPHPRPLLQRELM---------------VPGTRHSAV 73 (112)
T ss_dssp CCCCCEE-ESCCSSCEEEECCCCTT-SCSEEEEEEECCCCSSSCCCSSCCCCEEEE---------------EETTCCEEE
T ss_pred CCCceEE-EeecCCeEEEEECCCCC-CccEEEEEEEeCCCCccccccccCcceEEE---------------cCCCcCEEE
Confidence 3444444 23368999999986532 123456778754321000 000000000 012234688
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
|+||+|||+|..+|......+. .-.-....+|.+.+
T Consensus 74 l~gL~PgT~Y~~~V~A~~~~~~-s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 74 LRDLRSGTLYSLTLYGLRGPHK-ADSIQGTARTLSGP 109 (112)
T ss_dssp ECSCCTTCEEEEEEEEECSSSE-EEEEEEEEECCCCS
T ss_pred eCCCCCCCEEEEEEEEEECCcc-cCCEEEEEEECCCC
Confidence 9999999999999987632221 11234566777654
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.75 E-value=0.086 Score=48.52 Aligned_cols=75 Identities=16% Similarity=0.192 Sum_probs=43.2
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
.|.+|..+.+. ..+.+++.|+|....... ...-.|+|...+...+.. ... .-..
T Consensus 102 ~p~~p~~~~~~-~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~-----------------~~~~ 158 (197)
T 3lpw_A 102 RPLPPGKITLM-DVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWAT-----CAT-----------------VKVT 158 (197)
T ss_dssp CCCCCSCEEEE-EECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEE-----EEE-----------------ESSS
T ss_pred CCCCCcccEEE-eccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEE-----eec-----------------cccc
Confidence 45566666542 335789999998753211 112355665443322111 000 0112
Q ss_pred EEEecCCCCCCEEEEEEeeec
Q 007227 242 TGFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
..++++|+|++.|.|+|....
T Consensus 159 ~~~~~~L~p~t~Y~~~V~A~n 179 (197)
T 3lpw_A 159 EATITGLIQGEEYSFRVSAQN 179 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEE
T ss_pred EEEeCCcCCCCEEEEEEEEEe
Confidence 357899999999999999764
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=94.74 E-value=0.19 Score=47.23 Aligned_cols=103 Identities=9% Similarity=-0.088 Sum_probs=53.7
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+.+ ...+.++++|.|....+.....-.|+|...+..... ...... +-....++++
T Consensus 25 ~P~~l~~-~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~---~~~~~~-----------------~~~~~~~i~~ 83 (203)
T 2gee_A 25 QPTDLSF-VDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPI---FEDFVD-----------------SSVGYYTVTG 83 (203)
T ss_dssp CCEEEEE-ECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCC---EEEEEE-----------------TTCCEEEECS
T ss_pred CCCccEE-EecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCc---eeEEcC-----------------CCccEEEeCC
Confidence 3443333 233578999999876431112335666654332110 000110 1123567899
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEec
Q 007227 248 LWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGD 294 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
|+|++.|.++|...... +.|....+++...+.....+++...++
T Consensus 84 L~p~t~Y~~~V~a~~~~---g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 84 LEPGIDYDISVYTVKNG---GESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp CCTTCEEEEEEEEESSS---CBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred CCCCCEEEEEEEEEeCC---CccccEeeeecCCCcCCCceEEEEcCC
Confidence 99999999999876322 235544555433222223355555544
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.73 E-value=0.063 Score=46.14 Aligned_cols=40 Identities=23% Similarity=0.144 Sum_probs=32.3
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
..++|+||+|+|.|.+||......|...+|....|+|.+.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 4678999999999999998765455556888889998754
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=94.69 E-value=0.21 Score=46.93 Aligned_cols=73 Identities=19% Similarity=0.286 Sum_probs=42.5
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+.+ ...+.++++|+|....+..-..-.|+|....+... ...... ++-...++|+|
T Consensus 116 ~P~~l~~-~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i~~ 174 (203)
T 2gee_A 116 PPTDLRF-TNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEED---VAELSI-----------------SPSDNAVVLTN 174 (203)
T ss_dssp CCEEEEE-EEEETTEEEEEEECCSSCCCSEEEEEEEETTCGGG---CEEEEE-----------------CTTCCEEEECS
T ss_pred CCCceEE-EEcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCc---cEEEEc-----------------CCCcCEEEECC
Confidence 4555554 23356899999988642111234566765332110 000111 12234568899
Q ss_pred CCCCCEEEEEEeee
Q 007227 248 LWPNAMYTYKLGHR 261 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (612)
|+|++.|.++|...
T Consensus 175 L~p~t~Y~~~V~A~ 188 (203)
T 2gee_A 175 LLPGTEYVVSVSSV 188 (203)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred CCCCCEEEEEEEEe
Confidence 99999999999876
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.67 E-value=0.15 Score=48.00 Aligned_cols=42 Identities=24% Similarity=0.235 Sum_probs=32.7
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
...+|.+|+|++.|.|||.....-|...+|....|+|+|..|
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 456789999999999999877555666778888999988654
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=94.67 E-value=0.1 Score=49.29 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=56.5
Q ss_pred CCCCCCcceeeec-CCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQG-KVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~-~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
.|.+|..+.+... .+.+++.|.|....... ...-.|+|...++..+...... + ..+...
T Consensus 103 ~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~------~------------~~~~~~ 164 (215)
T 1bqu_A 103 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------D------------TASTRS 164 (215)
T ss_dssp ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG------G------------GCSCCS
T ss_pred cCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc------c------------ccCccc
Confidence 4566766666432 25789999998653210 0123556655432222111000 0 012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~---~~S~~~~F~T~p~ 280 (612)
..+|++|+|+|.|.+||......|.. .||+...++|.+.
T Consensus 165 ~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 165 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp EEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred eEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 56789999999999999976444443 3667788888653
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.19 Score=47.13 Aligned_cols=90 Identities=17% Similarity=0.046 Sum_probs=50.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+.+ ...+.++++|+|....... -..-.|+|... ...+.. .... ++.....
T Consensus 110 P~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~-~~~~~~---~~~~-----------------~~~~~~~ 167 (209)
T 2vkw_A 110 PSAPKLEGQ-MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRAL-SSEWKP---EIRL-----------------PSGSDHV 167 (209)
T ss_dssp CCCCEEEEE-ECTTSSCEEEEEECCCCTTSCCCEEEEEEEET-TSCCCC---CEEE-----------------CTTCCEE
T ss_pred CCCCccccc-ccccCCeEEEEEECcccCCCCCceEEEEEECC-CCCCce---eeec-----------------CCCccEE
Confidence 455544332 2346789999999763211 11235666652 111110 0110 1122346
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
+|++|+|++.|.+||......|...+|+...+++
T Consensus 168 ~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~ 201 (209)
T 2vkw_A 168 MLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 201 (209)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EecCCCCCCEEEEEEEEEeCCccCCcchhhhhhh
Confidence 7999999999999998775445555666655554
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.58 E-value=0.052 Score=47.10 Aligned_cols=37 Identities=16% Similarity=0.098 Sum_probs=28.1
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSE-YQFKASPY 280 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~-~~F~T~p~ 280 (612)
.+.+|+|++.|.+||......|...+|.. ..|+|.+.
T Consensus 77 ~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 77 AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 36799999999999997755555566766 47888654
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.54 E-value=0.24 Score=49.83 Aligned_cols=133 Identities=11% Similarity=0.102 Sum_probs=71.5
Q ss_pred cceEEEEEE--eecccceEEEEEecCCCCcEEEEeccceec-----cCCCCCCcceeeecC-----CCCcEEEEEEeCCC
Q 007227 125 GKGSLKLQL--INQRSDFSFVLFTNGLLNPKVVAVSNKVTF-----TNPNAPVYPRLAQGK-----VWNEMTVTWTSGYG 192 (612)
Q Consensus 125 g~~~~~~~l--~n~r~~~~f~~~~~~~~~p~~~a~s~~~~~-----~~~~~P~~~~La~~~-----~~~~m~V~W~T~~~ 192 (612)
|..+.+|.. +..-..|.|.+......- ...|..+.| .-|.+|..+.+.... ..+++.|+|.....
T Consensus 158 ~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G---~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~ 234 (313)
T 2d9q_B 158 GQSHCSIPRKHLLLYQNMGIWVQAENALG---TSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP 234 (313)
T ss_dssp TCSEEEEEGGGCCSSSCEEEEEEEEETTE---EEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGG
T ss_pred CCcEEEECccccccceeEEEEEEEECCCC---CccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCC
Confidence 444556554 223356777766531110 011222222 236667655543321 46899999987532
Q ss_pred CCC--CccEEEEc-cCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCc--
Q 007227 193 INE--AEPFVEWG-PKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTY-- 267 (612)
Q Consensus 193 ~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~-- 267 (612)
... -.-.|+|. ..+...+.... . ..+..+...|.+|+|+|.|..||......|..
T Consensus 235 ~~~~~l~Y~v~y~~~~~~~~w~~~~---~-----------------~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~w 294 (313)
T 2d9q_B 235 GLHINQKCELRHKPQRGEASWALVG---P-----------------LPLEALQYELCGLLPATAYTLQIRCIRWPLPGHW 294 (313)
T ss_dssp GTTSCEEEEEEEEESSSCCCCEEEE---E-----------------ECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCC
T ss_pred CCceeEEEEEEEccCCCCCCcEEcc---c-----------------ccCcceEEEEeCCCCCCeEEEEEEeeECCCCCcc
Confidence 111 12456776 44333322110 0 01234667899999999999999976433333
Q ss_pred -cccceEEEEcCCC
Q 007227 268 -IWSSEYQFKASPY 280 (612)
Q Consensus 268 -~~S~~~~F~T~p~ 280 (612)
.||+...|+|+..
T Consensus 295 S~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 295 SDWSPSLELRTTER 308 (313)
T ss_dssp CCCCCCEEECCCC-
T ss_pred CCCCCccceeCCcc
Confidence 3777888888653
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.50 E-value=0.51 Score=46.25 Aligned_cols=105 Identities=13% Similarity=0.143 Sum_probs=57.9
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+.+ ...+.++++|.|....+ ....-.|+|...++.... ...... +.+-....+
T Consensus 104 ~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~~--------------~~~~~~~~~ 163 (283)
T 1tdq_A 104 EIDAPKNLRV-GSRTATSLDLEWDNSEA-EAQEYKVVYSTLAGEQYH----EVLVPK--------------GIGPTTKTT 163 (283)
T ss_dssp CCCCCEEEEE-EEECSSCEEEEEECCSS-CCSEEEEEEEETTCCCCE----EEEEEC--------------CSSSEEEEE
T ss_pred CCCCCCceEE-EecCCCeEEEEecCCCC-CccEEEEEEEeCCCCcce----EEECCC--------------CCcccceEE
Confidence 4566765555 23357899999987642 122346677654332110 111110 011256778
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc--eEEEEcCCCCCCCCceEEEEEec
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSS--EYQFKASPYPGQDSLQQVIIFGD 294 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~--~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
+++|+|++.|.++|......| .|. ...+.|.|.+ ...+++...++
T Consensus 164 i~~L~p~t~Y~~~V~A~n~~g---~s~~~~~~~~t~~~~--P~~l~~~~~~~ 210 (283)
T 1tdq_A 164 LTDLVPGTEYGVGISAVMNSK---QSIPATMNARTELDS--PRDLMVTASSE 210 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTE---ECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred EecCCCCCEEEEEEEEEeCCC---CCcceEEEecCCCCC--CCccEEeEecC
Confidence 999999999999998763222 343 3445555543 22355544443
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.48 E-value=0.18 Score=46.39 Aligned_cols=90 Identities=13% Similarity=0.108 Sum_probs=51.1
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++ ...+.++++|+|.-..+ .-..-.|+|...++... .... ++-.....
T Consensus 6 ~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~-----~~~~-----------------~~~~~~~~ 61 (186)
T 1qr4_A 6 DLDNPKDLEV-SDPTETTLSLRWRRPVA-KFDRYRLTYVSPSGKKN-----EMEI-----------------PVDSTSFI 61 (186)
T ss_dssp --CCCEEEEE-ESCCSSEEEEEEECCSS-CCSEEEEEEECTTCCEE-----EEEE-----------------CTTCSEEE
T ss_pred CCcCCCceEE-EecCCCEEEEEEeCCCC-CccEEEEEEEeCCCCee-----EEEC-----------------CCCCCEEE
Confidence 3556766665 33457899999987532 12234566663322110 0110 11123457
Q ss_pred ecCCCCCCEEEEEEeeecCCCCcccc--ceEEEEcCCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWS--SEYQFKASPYP 281 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S--~~~~F~T~p~~ 281 (612)
++||+|++.|.++|.... + .+.| ....++|.|.+
T Consensus 62 i~~L~p~t~Y~~~V~a~~--~-~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 62 LRGLDAGTEYTISLVAEK--G-RHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp EESCCSSCEEEEEEEEES--S-SCBCCCEEEEEECCCCC
T ss_pred ECCCCCCCEEEEEEEEEc--C-CccCCCEEEEEECCCCC
Confidence 899999999999998763 2 2234 34667777654
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.47 E-value=0.17 Score=43.04 Aligned_cols=88 Identities=15% Similarity=0.074 Sum_probs=49.2
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++ ...+.+++.|.|......+. ..-.|+|...+.... ...... .+-...
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~ 75 (119)
T 1wfn_A 17 VPGPVGHLSF-SEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT---RVTHYL-----------------PNVTLE 75 (119)
T ss_dssp SCCCCSCCEE-ESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGG---CCCEEE-----------------CSSCCE
T ss_pred CCCCCCceEE-EECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCc---eEEEEe-----------------CCCceE
Confidence 3455655554 33357899999976532110 113455554332110 000000 123446
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceE
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEY 273 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~ 273 (612)
++|++|+|++.|.+||......|...||...
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 76 YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 7889999999999999876544555566554
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=94.46 E-value=0.038 Score=60.21 Aligned_cols=67 Identities=19% Similarity=0.261 Sum_probs=41.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccc--cCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~~ 363 (612)
+++++||+|.. ...+.++++.. ...+-++++||++ +.|..+ .+-+..+..+. ..-.++
T Consensus 84 pI~VIGDIHGq---------------~~dL~~LL~~~g~p~~d~yVFLGDyV-DRGp~S--~Evl~lL~aLk~~~P~~v~ 145 (521)
T 1aui_A 84 PVTVCGDIHGQ---------------FFDLMKLFEVGGSPANTRYLFLGDYV-DRGYFS--IECVLYLWALKILYPKTLF 145 (521)
T ss_dssp SEEEECCCTTC---------------HHHHHHHHHHHCCTTTCCEEECSCCS-SSSSCH--HHHHHHHHHHHHHSTTTEE
T ss_pred ceeeccCCCCC---------------HHHHHHHHHhcCCCCcceEEEcCCcC-CCCCCH--HHHHHHHHHHhhhCCCeEE
Confidence 58999999843 33455555532 3458899999999 556533 12222222211 123488
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 146 lLRGNHE~~ 154 (521)
T 1aui_A 146 LLRGNHECR 154 (521)
T ss_dssp ECCCTTSSH
T ss_pred EecCCccHH
Confidence 999999964
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=94.43 E-value=0.047 Score=59.22 Aligned_cols=68 Identities=16% Similarity=0.243 Sum_probs=42.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC---CCCEEEEcCccccCCCcccHHHHHHHhhhc--cccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEP--IASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~---~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~--l~~~vP 361 (612)
.|++++||+|.. ...+.++++... ..+.++++||++ +.|..+ .+....+.. +...-.
T Consensus 213 ~~~~vigDiHG~---------------~~~l~~~l~~~~~~~~~~~~v~lGD~v-drG~~s--~e~~~~l~~l~~~~~~~ 274 (477)
T 1wao_1 213 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFV-DRGSFS--VEVILTLFGFKLLYPDH 274 (477)
T ss_dssp CEEEEECBCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCS-SSSTTH--HHHHHHHHHHHHHSTTT
T ss_pred cceEEEeCCCCC---------------HHHHHHHHHHcCCCCCcCeEEEecccc-CCCcch--HHHHHHHHHHHhhCCCc
Confidence 689999999843 344566665532 235699999999 555432 122222211 122457
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
++.++||||..
T Consensus 275 ~~~lrGNHE~~ 285 (477)
T 1wao_1 275 FHLLRGNHETD 285 (477)
T ss_dssp EEEECCTTSSH
T ss_pred eEeecCCccHH
Confidence 89999999953
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=94.43 E-value=0.11 Score=42.72 Aligned_cols=88 Identities=17% Similarity=0.101 Sum_probs=49.0
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+.+. ..+.++++|+|..... .-..-.|+|....+.... ..... ++-...++|+|
T Consensus 4 ~P~~l~v~-~~~~~sv~l~W~~p~~-~i~~Y~v~y~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~ 61 (98)
T 3teu_A 4 APTDLQVT-NVTDTSITVSWTPPSA-TITGYRITYTPSNGPGEP---KELTV-----------------PPSSTSVTITG 61 (98)
T ss_dssp CCEEEEEE-EECSSCEEEEEECCSS-CCSEEEEEEEETTSCSCC---EEEEE-----------------CTTCSEEEECS
T ss_pred CCCceEEE-EecCCEEEEEEeCCCC-cccEEEEEEEECCCCCce---EEEEc-----------------CCCcCEEEecC
Confidence 45555542 3356899999987632 112236777643221100 00111 11234568999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 248 LWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
|+|++.|.+||..... .+.|+...+...+.
T Consensus 62 L~p~t~Y~~~V~A~n~---~G~s~p~~~~~~~~ 91 (98)
T 3teu_A 62 LTPGVEYVVSVYALKD---NQESPPLVGTQTTG 91 (98)
T ss_dssp CCTTCEEEEEEEEEET---TEECCCEEEEEECS
T ss_pred CCCCCEEEEEEEEEeC---CCCCCCeEEEeccC
Confidence 9999999999987632 23455555554443
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.38 E-value=0.12 Score=43.71 Aligned_cols=91 Identities=12% Similarity=0.085 Sum_probs=53.4
Q ss_pred ccCCCCCCcceeeecC-CCCcEEEEEEeCCC-----CCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccC
Q 007227 163 FTNPNAPVYPRLAQGK-VWNEMTVTWTSGYG-----INEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (612)
Q Consensus 163 ~~~~~~P~~~~La~~~-~~~~m~V~W~T~~~-----~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 236 (612)
..-|.+|....+..-. ..+++.|+|..... ...-.-.|+|...+...+.. .. .
T Consensus 5 ivkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~----~~-~---------------- 63 (109)
T 1uc6_A 5 SVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQH----VE-L---------------- 63 (109)
T ss_dssp SCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCC----EE-E----------------
T ss_pred EEecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEE----Ee-c----------------
Confidence 3456778777775533 46899999987642 00123467777654322211 00 0
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccc---cceEEEE
Q 007227 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIW---SSEYQFK 276 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~---S~~~~F~ 276 (612)
.-...+.|.+|+||+.|..||..... |...| |....++
T Consensus 64 -~~~~~~~l~~L~p~t~Y~~~VRa~~~-g~g~wS~WS~~~~~~ 104 (109)
T 1uc6_A 64 -SNGTAHTITDAYAGKEYIIQVAAKDN-EIGTWSDWSVAAHAT 104 (109)
T ss_dssp -SSCSEEEETTCCSSSCEEEEEECCBS-SSCCCCCCCEEEEEC
T ss_pred -ccCCEEEEeCCCCCCEEEEEEEEEeC-CCCCcCcCCCCeeee
Confidence 00124578999999999999997642 44344 4444444
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.36 E-value=0.12 Score=47.43 Aligned_cols=108 Identities=11% Similarity=0.006 Sum_probs=56.4
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++. ..+.++++|.|....... ...-.|+|...+...+.... .. .-..
T Consensus 5 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~-----------------~~~~ 62 (197)
T 3lpw_A 5 TPGPPQDLKVK-EVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA----TN-----------------CHKT 62 (197)
T ss_dssp SCCCCEEEEEE-EECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEE----EE-----------------ECSS
T ss_pred CCCCCCCcEEE-EecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEee----cC-----------------CCcc
Confidence 45667665553 235789999998763211 11235666554332211100 00 0123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC-CCCCCCceEEEEEec
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP-YPGQDSLQQVIIFGD 294 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p-~~g~~~~~rf~v~GD 294 (612)
..++++|+|++.|.|||......|...++....+.+.. .|.....+++...++
T Consensus 63 ~~~~~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~ 116 (197)
T 3lpw_A 63 SWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTR 116 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEESCCCCCCCSCEEEEEECS
T ss_pred EEEEcCCCCCCEEEEEEEEEcCccccCCCCCccceecCCCCCCCcccEEEeccC
Confidence 45789999999999999876444433344433344332 222222355554443
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=94.31 E-value=0.13 Score=43.61 Aligned_cols=89 Identities=13% Similarity=0.055 Sum_probs=47.7
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCC-CCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKG-GDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
-|.+|.........+.+++.|+|.... .+..+.-|+... +..+...+... .+. .-
T Consensus 4 ~P~aP~~l~a~~~~~~~~v~LsW~~~~---~~~~Y~VyR~~~~~~~~~~i~~~~-------------------~~t--sy 59 (103)
T 3mpc_A 4 APAFPTGLSAVLDSSGNTANLTWNAAP---GANSYNVKRSTKSGGPYTTIATNI-------------------TST--NY 59 (103)
T ss_dssp CCCCCEEEEEEECTTSCCEEEEEECCT---TCSEEEEEEESSTTCCCEEEEEEE-------------------CSS--EE
T ss_pred CCCCCceeEEEEeCCCCEEEEEEECCC---CCCEEEEEEecCCCCCcEEEeecC-------------------CCC--EE
Confidence 356676655533334578999998753 245565565432 11111100000 011 12
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
+.++|+||++|+|+|..-...|....|...+.++
T Consensus 60 ~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~ 93 (103)
T 3mpc_A 60 TDTGVATGTKYYYVVSAVSNGVETLNSAEAILQY 93 (103)
T ss_dssp EETTCCTTCCCEEEEEEEETTEECCCCCCEECBC
T ss_pred EECCCCCCCEEEEEEEEEeCcCCcCCCccEEEEC
Confidence 3589999999999998754333334455544443
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.28 E-value=0.18 Score=41.18 Aligned_cols=73 Identities=16% Similarity=0.138 Sum_probs=41.6
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|...++. ..+.++++|+|.-... .-..-.|+|...++... .. +. ...+-...++|+|
T Consensus 4 ~P~~l~~~-~~~~~si~lsW~~p~~-~i~~Y~v~y~~~~~~~~------~~------~~--------~~~~~~~~~~l~~ 61 (94)
T 1j8k_A 4 RPKGLAFT-DVDVDSIKIAWESPQG-QVSRYRVTYSSPEDGIH------EL------FP--------APDGEEDTAELQG 61 (94)
T ss_dssp CCCCCEEE-EEETTEEEEECCCCSS-CCSCEEEEEEETTTEEE------EE------CC--------CCCSSCCEEEECS
T ss_pred CCCccEEE-eecCCEEEEEEcCCCC-CcceEEEEEEeCCCCCc------eE------Ee--------cCCCCccEEEeCC
Confidence 45555552 3346899999965531 11223566764332100 00 00 0012234678999
Q ss_pred CCCCCEEEEEEeeec
Q 007227 248 LWPNAMYTYKLGHRL 262 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~ 262 (612)
|+||+.|.++|....
T Consensus 62 L~p~t~Y~~~V~A~~ 76 (94)
T 1j8k_A 62 LRPGSEYTVSVVALH 76 (94)
T ss_dssp CCCCSEEEEEEEECS
T ss_pred CCCCCEEEEEEEEEc
Confidence 999999999998763
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.26 E-value=0.055 Score=46.62 Aligned_cols=76 Identities=12% Similarity=0.094 Sum_probs=44.4
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+. ..+.++++|.|....... -..-.|+|...+...+..... .....
T Consensus 17 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~---------------------~~~~~ 74 (120)
T 2yux_A 17 RPGPPQIVKIE-DVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE---------------------HYHRT 74 (120)
T ss_dssp CCCCCSCEEEE-EEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES---------------------SCCSS
T ss_pred CCCcCCCCEEE-EecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee---------------------cCCcC
Confidence 45677776653 335689999998754211 112356776544332211100 00112
Q ss_pred EEEecCCCCCCEEEEEEeeec
Q 007227 242 TGFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
..++++|+|++.|.|||....
T Consensus 75 ~~~v~~L~p~t~Y~frV~A~n 95 (120)
T 2yux_A 75 SATITELVIGNEYYFRVFSEN 95 (120)
T ss_dssp CCEECCCCSSEEEEEEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEee
Confidence 347899999999999998753
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=94.26 E-value=0.2 Score=48.78 Aligned_cols=93 Identities=11% Similarity=0.084 Sum_probs=54.8
Q ss_pred cCCCCCCcceeeecC-CC----CcEEEEEEeCCCCC------CCccEEEEccCCCCCccccCcceEEeccccCCCCCccc
Q 007227 164 TNPNAPVYPRLAQGK-VW----NEMTVTWTSGYGIN------EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTV 232 (612)
Q Consensus 164 ~~~~~P~~~~La~~~-~~----~~m~V~W~T~~~~~------~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~ 232 (612)
..|.+|..+.+.+.. +. .++.|.|....... .-.-.|+|..+++..+....
T Consensus 129 v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------------ 190 (236)
T 1axi_B 129 VQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------------ 190 (236)
T ss_dssp BCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------------
T ss_pred cccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe------------------
Confidence 356778776543332 12 45999998874210 01234556554332221100
Q ss_pred cccCCCeEEEEEecCCCCCCEEEEEEeeecCCC--CccccceEEEEcC
Q 007227 233 GWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNG--TYIWSSEYQFKAS 278 (612)
Q Consensus 233 g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g--~~~~S~~~~F~T~ 278 (612)
..-...+.|.+|+||++|..||......| -..||+...|+|+
T Consensus 191 ----~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 191 ----PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp ----CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ----ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 01124567899999999999999875444 3357778888775
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.20 E-value=0.11 Score=48.74 Aligned_cols=94 Identities=13% Similarity=0.046 Sum_probs=53.7
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+.. +.++++|+|.-...... ..-.|+|..... ..+.... .... +...
T Consensus 5 ~P~~P~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~--~~~~-----------------~~~~ 63 (205)
T 1cfb_A 5 VPNAPKLTGITC--QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY--EKVP-----------------NTDS 63 (205)
T ss_dssp CCCCCEEEEEEE--CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE--EEEE-----------------TTCS
T ss_pred CCCCCCCcEEEe--cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeee--eccC-----------------CCce
Confidence 466777777755 78999999987632111 123566754322 1111100 0000 1111
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcccc-ceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWS-SEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S-~~~~F~T~p~ 280 (612)
...+ +|+|++.|.+||......|...+| ....++|.+.
T Consensus 64 ~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 64 SFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 2345 999999999999876444444566 4567887653
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=94.04 E-value=0.22 Score=49.26 Aligned_cols=106 Identities=10% Similarity=-0.048 Sum_probs=58.1
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+.+ ...+.++++|+|....+ ....-.|+|...+..... ..... ++-...+.+
T Consensus 21 p~~P~~l~~-~~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i 78 (290)
T 3r8q_A 21 IPAPTDLKF-TQVTPTSLSAQWTPPNV-QLTGYRVRVTPKEKTGPM---KEINL-----------------APDSSSVVV 78 (290)
T ss_dssp CCCCEEEEE-EEECSSCEEEEEECCSS-CCCEEEEEEEESSSSSCC---EEEEE-----------------CTTCCEEEE
T ss_pred CCCCCceEE-EECCCCEEEEEEeCCCC-CeeEEEEEEEeCCCCCce---EEEEc-----------------CCCccEEEe
Confidence 445555554 23457899999997632 122346777654321110 00111 112346678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEec
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGD 294 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
++|+|++.|.++|......|...++ ...|+|.+.+.....+++...++
T Consensus 79 ~~L~p~t~Y~~~V~a~~~~g~s~~s-~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 79 SGLMVATKYEVSVYALKDTLTSRPA-QGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp CSCCSSCEEEEEEEEEETTEECCCE-EEEEECCCCCCCCEEEEEEEECS
T ss_pred CCCCCCCEEEEEEEEEeCCCCCCCc-ceeEecCCCCCCCceeEEEEcCC
Confidence 9999999999999876433333333 35677765443333344443333
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.98 E-value=0.097 Score=44.90 Aligned_cols=92 Identities=10% Similarity=-0.037 Sum_probs=52.9
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.+|..+.+.. ..++++|+|.-+..... ..-.|+|+.. +..+..... .+ ++-....+
T Consensus 9 ~pP~~l~v~~--~~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~--~~-----------------~~~~t~~~ 66 (108)
T 1v5j_A 9 SPPRGLVAVR--TPRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDP--AV-----------------AGTETELL 66 (108)
T ss_dssp CCCEEEEEEE--CSSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEE--EE-----------------CSSCCEEE
T ss_pred CCCcceEEEE--eCCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeee--ec-----------------CCCcCEEE
Confidence 4455555533 45789999998753111 1236778762 222221110 01 11233456
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
+.+|+|+++|.+||..-...|....|+...++|...
T Consensus 67 v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 67 VPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp CCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred eCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 999999999999998764444444566666666544
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=93.96 E-value=0.29 Score=47.02 Aligned_cols=95 Identities=17% Similarity=0.203 Sum_probs=56.7
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC----CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN----EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
+.+|.-+++... +.+.+.|+|....... .-.-.|+|..++. .+... ...+. ....+
T Consensus 106 ~~pP~~l~~~~~-~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~-~w~~~-~~~~~-----------------~~~~~ 165 (214)
T 2b5i_B 106 LMAPISLQVVHV-ETHRCNISWEISQASHYFERHLEFEARTLSPGH-TWEEA-PLLTL-----------------KQKQE 165 (214)
T ss_dssp CCCCEEEEEEEE-CSSCEEEEEECCSCCGGGTTCEEEEEEEECTTS-CSTTS-CCEEE-----------------CSCCC
T ss_pred CCCCceEEEEEe-cCCeEEEEECCCCccccCCCceEEEEEEecCCC-Chhee-eeeee-----------------cccce
Confidence 366777776543 3468999998864210 0123566665432 12111 11111 11234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCC-C---ccccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNG-T---YIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g-~---~~~S~~~~F~T~p~ 280 (612)
.+.|.+|+||+.|..||......| . ..||+...|+|.|.
T Consensus 166 ~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 166 WICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred EEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 677899999999999999874322 2 35788899999875
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.72 E-value=0.27 Score=46.66 Aligned_cols=88 Identities=13% Similarity=0.088 Sum_probs=48.7
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCCC-CCccEEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGIN-EAEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~-~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
.-|.+|..+.+......+++.|.|....... .-.-.|+|...+. ..+... .. ...-..
T Consensus 108 vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~------~~--------------~~~~~~ 167 (206)
T 3v6o_A 108 VKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMY------EV--------------YDAKSK 167 (206)
T ss_dssp BCCCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEE------EE--------------CC---C
T ss_pred EcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEE------ec--------------ccCcce
Confidence 3677888777765545789999998764211 0123456655431 111110 00 001123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSS 271 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~ 271 (612)
.+.|.+|+||+.|..||......|...||+
T Consensus 168 ~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSe 197 (206)
T 3v6o_A 168 SVSLPVPDLCAVYAVQVRCKRLDGLGYWSN 197 (206)
T ss_dssp EEEECCSCTTSCEEEEEEEEETTSCSCCCC
T ss_pred eEEeecCCCCCEEEEEEEEecCCCCCcCCC
Confidence 578999999999999999875445555665
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=93.60 E-value=0.19 Score=50.25 Aligned_cols=97 Identities=14% Similarity=0.145 Sum_probs=57.5
Q ss_pred CCCCCCcceeee-cCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQ-GKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~-~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+.. ..+.++++|+|....... ...-.|+|...+...+...... + ..+-..
T Consensus 199 ~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~------~------------~~~~~~ 260 (303)
T 1i1r_A 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------D------------TASTRS 260 (303)
T ss_dssp ECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG------G------------GCSCCS
T ss_pred ecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc------c------------CCCcee
Confidence 466777666643 235789999998764210 0123566665543222211000 0 012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~---~~S~~~~F~T~p 279 (612)
..+|++|+|+|.|.+||......|.. .||+...|+|+.
T Consensus 261 ~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 261 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 56789999999999999976434433 466788899864
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=93.54 E-value=0.13 Score=48.50 Aligned_cols=89 Identities=16% Similarity=0.165 Sum_probs=50.5
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
.+|...++ ...+.++++|+|..... .-..-.|+|...+.... ....+. ++-...++|+
T Consensus 105 ~~P~~l~v-~~~t~~si~l~W~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l~ 162 (195)
T 2qbw_A 105 SVPTNLEV-VAATPTSLLISWDASYY-GVSYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATIS 162 (195)
T ss_dssp CSSCCCEE-EEEETTEEEEECCCCCS-SCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCSEEEEC
T ss_pred CCCcccEE-EeCCCCEEEEEEeCCCC-CccEEEEEEEECCCCCc---ceEEEe-----------------CCCCCEEEeC
Confidence 34555554 33357899999976532 11223566765432110 000111 1123467899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
||+|+|+|.++|......|....|+...|++
T Consensus 163 gL~p~t~Y~~~V~A~~~~G~g~~S~~v~~~~ 193 (195)
T 2qbw_A 163 GLKPGVDYTITVYAYSDYYGSHHYSPISINY 193 (195)
T ss_dssp SCCTTCEEEEEEEEESSTTSSCBCCCEEEEE
T ss_pred CCCCCCEEEEEEEEEeCCccCCCCCCEEEEe
Confidence 9999999999999875445444565555543
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=93.53 E-value=0.23 Score=48.34 Aligned_cols=96 Identities=20% Similarity=0.182 Sum_probs=58.2
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCCC----CCccEEEEccCC-CCCccccCcceEEeccccCCCCCccccccCCC
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGIN----EAEPFVEWGPKG-GDRTYSPAGTLTFGRGSMCGAPARTVGWRDPG 238 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~----~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 238 (612)
.-|.+|..+.+......+++.|+|....... .-.-.|+|.... ...+.. . .. ..
T Consensus 111 VKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~----v--~~---------------~~ 169 (223)
T 3up1_A 111 VKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTH----V--NL---------------SS 169 (223)
T ss_dssp BCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEE----E--EE---------------SS
T ss_pred EEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEE----E--Ee---------------cC
Confidence 3577888777766555677999998864211 112356666543 122211 0 00 11
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecC-CCC---ccccceEEEEcCCC
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLF-NGT---YIWSSEYQFKASPY 280 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~-~g~---~~~S~~~~F~T~p~ 280 (612)
....+.+.+|+||+.|..||..... .+. ..||....|+|++.
T Consensus 170 t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 170 TKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp SEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred ceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 2234567899999999999997742 222 24677899999765
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=93.49 E-value=0.22 Score=50.89 Aligned_cols=93 Identities=14% Similarity=0.037 Sum_probs=50.6
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+.+....+.++++|.|....+.....-.|+|...++..... ..... .+.....++
T Consensus 2 p~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~i 62 (368)
T 1fnf_A 2 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVV-----------------HADQSSCTF 62 (368)
T ss_dssp CCCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCC--EEEEE-----------------CTTCCEEEC
T ss_pred CCCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCce--eEEEe-----------------cCCcCEEEE
Confidence 45676666643333346999998864211223466676543321100 00001 112345689
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
++|+|++.|.|||...... +.|...+..+.+.
T Consensus 63 ~~L~p~t~Y~~~V~a~~~~---g~s~~~~~~~~~~ 94 (368)
T 1fnf_A 63 DNLSPGLEYNVSVYTVKDD---KESVPISDTIIPA 94 (368)
T ss_dssp CCCCTTSCEEEEEEEEETT---EECCCEEEEECCC
T ss_pred CCCCCCCEEEEEEEEEcCC---CccCceeeeecCC
Confidence 9999999999999876322 2344444444443
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.01 E-value=2.4 Score=47.75 Aligned_cols=42 Identities=19% Similarity=0.297 Sum_probs=31.3
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccce---EEEEcCCC
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSE---YQFKASPY 280 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~---~~F~T~p~ 280 (612)
-...++|+||+|++.|.+||......|...+|.. ..++|.+.
T Consensus 332 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 332 FQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 3467889999999999999987644454455655 77888654
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.96 E-value=0.8 Score=37.89 Aligned_cols=83 Identities=19% Similarity=0.380 Sum_probs=51.0
Q ss_pred CCcceeeecC-CCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccC---CCeEEEEE
Q 007227 169 PVYPRLAQGK-VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD---PGYIHTGF 244 (612)
Q Consensus 169 P~~~~La~~~-~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~---~g~~h~a~ 244 (612)
|.|.-++-+. ..++-.|.|.......-..-.+.|+.+... .-|++ |+.+..-+
T Consensus 8 pa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~-----------------------g~Wke~~Ip~h~nSYt 64 (98)
T 1oww_A 8 PVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSV-----------------------GRWKEATIPGHLNSYT 64 (98)
T ss_dssp CCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCS-----------------------SCCEEEEECSSCCEEE
T ss_pred ceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCC-----------------------CceeEEEecCccceEE
Confidence 4444443332 378999999987421001234444443221 01332 56777788
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc--eEEEEc
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSS--EYQFKA 277 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~--~~~F~T 277 (612)
|+||+||..|.=++-+... .+|++ .+.|.|
T Consensus 65 I~GL~P~~~YE~qv~S~~r---yG~~Evs~f~FtT 96 (98)
T 1oww_A 65 IKGLKPGVVYEGQLISIQQ---YGHQEVTRFDFTT 96 (98)
T ss_dssp ECSCCSSEEEEEEEEEEES---SSCEEEEEEEEEE
T ss_pred EecCCCCcEEEEEEEEeec---cCcccceEEEEEe
Confidence 9999999999999998743 45665 466665
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.92 E-value=0.4 Score=44.64 Aligned_cols=89 Identities=19% Similarity=0.298 Sum_probs=49.8
Q ss_pred CCCcceeee-cCCCCcEEEEEEeCCCCCCCccEEEEccCCCC-CccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 168 APVYPRLAQ-GKVWNEMTVTWTSGYGINEAEPFVEWGPKGGD-RTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 168 ~P~~~~La~-~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+|..+.+.. +...++++|.|....+..-..-.|+|...... .+. .... ++-...++|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~-----------------~~~~~~~~i 60 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWK----EATI-----------------PGHLNSYTI 60 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCE----EEEE-----------------CTTCCEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceE----EEec-----------------CCCccEEEe
Confidence 355555432 12378999999986321122346677654321 111 0111 111236789
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
+||+|++.|.+||......|...++ ...|+|.
T Consensus 61 ~~L~p~t~Y~~~V~a~n~~G~~~~~-~~~~~t~ 92 (201)
T 2ha1_A 61 KGLKPGVVYEGQLISIQQYGHQEVT-RFDFTTT 92 (201)
T ss_dssp CSCCTTEEEEEEEEEECTTSCEEEE-EEEEEEC
T ss_pred cCCCCCCEEEEEEEEEecccccCce-eEEEecC
Confidence 9999999999999876433433322 4566654
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=92.91 E-value=0.27 Score=47.30 Aligned_cols=94 Identities=15% Similarity=0.129 Sum_probs=55.8
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC---CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++......+++.|+|........ -.-.|+|...++..+.. .... .+-..
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~---~~~~-----------------~~~~~ 180 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQ---RVEI-----------------LEGRT 180 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCC---EEEE-----------------CTTCC
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEE---EEEE-----------------ecCce
Confidence 4667877777654447899999988643100 12356665443321111 0000 01123
Q ss_pred EEEecCCCCCCEEEEEEeeecCC----CC-ccccceEEEEcC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFN----GT-YIWSSEYQFKAS 278 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~----g~-~~~S~~~~F~T~ 278 (612)
.+.|.+|+||+.|..||...... |. ..||+...|+|+
T Consensus 181 ~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 181 ECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp EEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred EEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 56789999999999999987321 11 357788889983
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=92.76 E-value=0.39 Score=39.96 Aligned_cols=75 Identities=16% Similarity=0.214 Sum_probs=43.0
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCC-CCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGI-NEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~-~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
.+|...++ ...+.++++|.|...... .-..-.|+|...++... ...... ++-...++|
T Consensus 6 ~~P~~l~v-~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 64 (101)
T 3k2m_C 6 SVPTKLEV-VAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATI 64 (101)
T ss_dssp BSSCEEEE-EEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCcceEE-eecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCc---cEEEEc-----------------CCCccEEEE
Confidence 35666665 233578999999875410 11123567765432110 000111 112246789
Q ss_pred cCCCCCCEEEEEEeeec
Q 007227 246 RELWPNAMYTYKLGHRL 262 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~ 262 (612)
+||+||+.|..+|....
T Consensus 65 ~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 65 SGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CSCCTTCEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEEe
Confidence 99999999999998763
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=92.74 E-value=0.39 Score=44.98 Aligned_cols=94 Identities=16% Similarity=0.248 Sum_probs=49.3
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCC-CCccccCcceEEeccccCCCCCccccc-cCCCeEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGW-RDPGYIH 241 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~-~~~g~~h 241 (612)
+.+|..+++. ..+.++++|+|.-..... ...-.|+|...+. ..+........+.. +. + ...+-..
T Consensus 2 ~~pP~~~~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~------~~----~~~~~~~~~ 70 (214)
T 2ibg_A 2 TYPPTPPNVT-RLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGK------PK----WNSELGKSF 70 (214)
T ss_dssp CCCCCCCEEE-EEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCS------SS----CSSSSEEEE
T ss_pred CCCCCCCEee-EecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccc------cc----cccccCcce
Confidence 4467777763 336789999998754211 0122455555432 22221111111100 00 0 0112456
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcccc
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWS 270 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S 270 (612)
..++++|+|++.|.|||......|...+|
T Consensus 71 ~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s 99 (214)
T 2ibg_A 71 TASVTDLKPQHTYRFRILAVYSNNDNKES 99 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCEEEC
T ss_pred eEEecCCcCCCEEEEEEEEEecCCCCCCC
Confidence 67899999999999999875333433334
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.55 E-value=0.32 Score=42.22 Aligned_cols=74 Identities=18% Similarity=0.283 Sum_probs=43.6
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|...++. ..+.+++.|.|.-... .-..-.|+|...++... ...... ++-...++|
T Consensus 29 ~~~P~~l~v~-~~t~~Si~lsW~~p~~-~i~~Y~V~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 86 (121)
T 2ocf_D 29 SDVPTKLEVV-AATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTATI 86 (121)
T ss_dssp CCSCEEEEEE-EECSSCEEEEEECCSS-CCCEEEEEEEETTTCSC---BEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCccEEE-ecCCCEEEEEEcCCCC-CCcEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 3556666653 3457899999976532 11223566765433210 000110 112346789
Q ss_pred cCCCCCCEEEEEEeee
Q 007227 246 RELWPNAMYTYKLGHR 261 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (612)
+||+||+.|.++|...
T Consensus 87 ~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 87 SGLKPGVDYTITVYAV 102 (121)
T ss_dssp CCCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999875
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=92.46 E-value=0.54 Score=47.62 Aligned_cols=92 Identities=14% Similarity=0.130 Sum_probs=53.1
Q ss_pred CCCCCCcceeeecC-CCCcEEEEEEeCCCCCCC----ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 165 NPNAPVYPRLAQGK-VWNEMTVTWTSGYGINEA----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~P~~~~La~~~-~~~~m~V~W~T~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
-|.+|..+.+.... +.++++|+|.-....... .-.|+|...+...+... .. .+.
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~------~~---------------~~~ 254 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTW------MV---------------KDL 254 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEE------EC---------------GGG
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEE------cc---------------cCC
Confidence 36677666665433 357999999986431111 23566665543222210 00 011
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEc
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYI---WSSEYQFKA 277 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~---~S~~~~F~T 277 (612)
-...+|.+|+|++.|..||......|... ||+...++|
T Consensus 255 ~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 255 QHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp CSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred ceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 23567899999999999999774334433 455555544
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=92.36 E-value=0.45 Score=45.86 Aligned_cols=35 Identities=14% Similarity=0.358 Sum_probs=25.9
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
+++||+|+|.|.|||.....+|...-++...+||.
T Consensus 203 t~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 203 TFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred EecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 57999999999999987755554433355666663
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=92.36 E-value=0.4 Score=39.76 Aligned_cols=71 Identities=17% Similarity=0.127 Sum_probs=40.9
Q ss_pred CCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCC
Q 007227 169 PVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLREL 248 (612)
Q Consensus 169 P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL 248 (612)
|....+ ...+.++++|+|....+ .-..-.|+|...+.... ....... +-.-.++|+||
T Consensus 5 P~~l~v-~~~t~~Sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~~~-----------------~~~t~~~l~gL 62 (98)
T 3tes_A 5 PKNLVV-SEVTEDSLRLSWTAPDA-AFDSFMIQYQESEKVGE---AINLTVP-----------------GSERSYDLTGL 62 (98)
T ss_dssp CEEEEE-ESCCSSCEEEEEECCTT-SCSEEEEEEEETTBCSC---CEEEEEE-----------------TTCSEEEECSC
T ss_pred CCceEE-EecCCCeEEEEecCCcC-ccceEEEEEEECCCCCc---eEEEEcC-----------------CCcCEEEECCC
Confidence 444443 23367999999987642 11223577765432110 0001111 11235689999
Q ss_pred CCCCEEEEEEeee
Q 007227 249 WPNAMYTYKLGHR 261 (612)
Q Consensus 249 ~Pgt~Y~Yrv~~~ 261 (612)
+|++.|.++|...
T Consensus 63 ~P~t~Y~~~V~A~ 75 (98)
T 3tes_A 63 KPGTEYTVSIYGV 75 (98)
T ss_dssp CTTCEEEEEEEEE
T ss_pred CCCCEEEEEEEEE
Confidence 9999999999876
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.21 E-value=0.63 Score=45.54 Aligned_cols=105 Identities=14% Similarity=0.073 Sum_probs=57.6
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+.+ ...+.++++|.|.-... ....-.|+|+........ ..... ++......
T Consensus 14 ~p~~P~~l~~-~~~~~~sv~l~W~~~~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~ 71 (283)
T 1tdq_A 14 VIDGPTQILV-RDVSDTVAFVEWTPPRA-KVDFILLKYGLVGGEGGK---TTFRL-----------------QPPLSQYS 71 (283)
T ss_dssp SSCCCEEEEE-EEECSSCEEEEEECCSS-CCSEEEEEEEESSSSCCC---EEEEE-----------------CTTCSEEE
T ss_pred CCCCCcEEEE-EecCCCeEEEEEECCCC-ceeEEEEEEEEecCCCCc---EEEEe-----------------CCCCCEEE
Confidence 3456666655 23356899999987641 112346777543221100 00111 11234567
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEec
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGD 294 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
|++|+|++.|.++|......|... .....|+|+|.+- ..+++...++
T Consensus 72 i~~L~p~t~Y~~~V~a~~~~g~s~-~~~~~~~t~p~~P--~~l~~~~~~~ 118 (283)
T 1tdq_A 72 VQALRPGSRYEVSISAVRGTNESD-ASSTQFTTEIDAP--KNLRVGSRTA 118 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCC--EEEEEEEECS
T ss_pred ecCCCCCCEEEEEEEEECCCCCCC-CeeEEEECCCCCC--CceEEEecCC
Confidence 899999999999998763222211 2345677876542 2355544443
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.20 E-value=0.53 Score=40.81 Aligned_cols=40 Identities=20% Similarity=0.025 Sum_probs=26.4
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
....+|++|+|++.|.+||......|...++.. .++|.+.
T Consensus 80 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~-~~~T~~~ 119 (126)
T 1x5i_A 80 QRYYTIENLDPSSHYVITLKAFNNVGEGIPLYE-SAVTRPH 119 (126)
T ss_dssp CCEEEECSCCSSCEECCEEEEECSSCBCCCCCC-CEECCCC
T ss_pred eeEEEEeCCCCCCEEEEEEEEEeCCccCcceee-EEecccC
Confidence 345688999999999999987643444333432 3555443
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=91.92 E-value=0.42 Score=41.00 Aligned_cols=74 Identities=23% Similarity=0.404 Sum_probs=43.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|....+. ..+.++++|.|....+ .-..-.|+|...++... ...... ++-...++|
T Consensus 4 P~~P~~L~v~-~~t~~Sv~lsW~~p~g-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~~l 61 (114)
T 3qwq_B 4 SDVPRDLEVV-AATPTSLLISWDSGRG-SYQYYRITYGETGGNSP---VQEFTV-----------------PGPVHTATI 61 (114)
T ss_dssp -CCCEEEEEE-EEETTEEEEEEECCSC-CCSEEEEEEEESSCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEE-ecCCCEEEEEEcCCcC-cccEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 4556555552 3357899999987632 11234677775433210 001111 112345789
Q ss_pred cCCCCCCEEEEEEeee
Q 007227 246 RELWPNAMYTYKLGHR 261 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (612)
+||+|+|.|..+|...
T Consensus 62 ~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 62 SGLKPGVDYTITVYAV 77 (114)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999865
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.56 E-value=0.7 Score=44.39 Aligned_cols=98 Identities=12% Similarity=0.191 Sum_probs=56.8
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCC-------CCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCC
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGI-------NEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDP 237 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~-------~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~ 237 (612)
-|.+|..+.+. ..+.+.|+|...... ..-.-.|+|...+. .+.......... ..
T Consensus 100 kp~PP~nltv~---~~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~~~---------------~~ 160 (219)
T 3tgx_A 100 KPAPPFDVTVT---FSGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKLIS---------------VD 160 (219)
T ss_dssp CCCCCEEEEEE---ESSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEEEC---------------SS
T ss_pred EeCCCCceEEE---eCCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-CceecccceeEe---------------cC
Confidence 56678755554 246899999986421 01123566665542 221110000000 01
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCC---c---cccceEEEEcCCCC
Q 007227 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGT---Y---IWSSEYQFKASPYP 281 (612)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~---~---~~S~~~~F~T~p~~ 281 (612)
+....+.+.+|+||+.|..||......|. . .||+...|.|++..
T Consensus 161 ~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 161 SRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp CSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred CCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 23456678999999999999998754332 2 36788999998753
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.47 E-value=0.49 Score=39.55 Aligned_cols=75 Identities=23% Similarity=0.396 Sum_probs=44.2
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCC--CCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGI--NEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~--~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
+.+|...++. ..+.++++|.|...... .-..-.|+|...+.... ...... ++-...+
T Consensus 8 ~~~P~~l~v~-~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~ 66 (103)
T 3t04_D 8 SSVPTKLEVV-DATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSP---VQEFTV-----------------PGYYSTA 66 (103)
T ss_dssp CCCCCSCEEE-EEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEE
T ss_pred CCCCceeEEE-ecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCc---cEEEEc-----------------CCCcCEE
Confidence 4567666662 34578999999765421 01123577765432110 000111 1123467
Q ss_pred EecCCCCCCEEEEEEeee
Q 007227 244 FLRELWPNAMYTYKLGHR 261 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~ 261 (612)
+|+||+|++.|..+|...
T Consensus 67 ~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 67 TISGLKPGVDYTITVYAY 84 (103)
T ss_dssp EECSCCTTCCEEEEEEEE
T ss_pred EeCCCCCCCEEEEEEEEE
Confidence 899999999999999876
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=91.40 E-value=0.23 Score=40.92 Aligned_cols=74 Identities=18% Similarity=0.316 Sum_probs=44.0
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|...++. ..+.++++|.|..... .-..-.|+|...++... ...... ++-...++|
T Consensus 5 ~~~P~~l~v~-~~t~~Si~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 62 (97)
T 3qht_C 5 SSVPTKLEVV-AATPTSLLISWDASSS-SVSYYRITYGETGGNSP---VQEFTV-----------------PGSSSTATI 62 (97)
T ss_dssp CCSSSSCEEE-EEETTEEEEECCCCCS-SCCEEEEEEEESSSCSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEE-ecCCCEEEEEEeCCCC-CCCEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 4567666662 3457899999986532 11223567765433210 000111 122346789
Q ss_pred cCCCCCCEEEEEEeee
Q 007227 246 RELWPNAMYTYKLGHR 261 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (612)
+||+|++.|..+|...
T Consensus 63 ~~L~p~t~Y~v~V~A~ 78 (97)
T 3qht_C 63 SGLSPGVDYTITVYAY 78 (97)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999865
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.29 E-value=0.11 Score=43.64 Aligned_cols=76 Identities=18% Similarity=0.291 Sum_probs=43.5
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|...++. ..+.+++.|.|..... .-..-.|+|........ ..... .++-...++
T Consensus 7 ~p~~P~~l~v~-~~t~~si~lsW~~p~g-~i~~Y~v~y~~~~~~~~---~~~~~-----------------v~~~~~~~~ 64 (105)
T 2ekj_A 7 GRSPPSNLALA-SETPDSLQVSWTPPLG-RVLHYWLTYAPASGLGP---EKSVS-----------------VPGARSHVT 64 (105)
T ss_dssp TCCCCEEEEEE-EEETTEEEEEEECCSS-CCSBBCBBCCCTTSCSC---CCCBC-----------------CBTTSSEEE
T ss_pred CCCCCCceEEE-eCCCCEEEEEEeCCCC-cceEEEEEEEECCCCCc---cEEEE-----------------eCCCcCEEE
Confidence 45567666652 3357899999987632 11223455544322100 00000 012234568
Q ss_pred ecCCCCCCEEEEEEeeec
Q 007227 245 LRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~ 262 (612)
|+||+|+|.|.++|....
T Consensus 65 l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 65 LPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp ECSCCSSCCCBCBBCBBC
T ss_pred eCCCCCCCEEEEEEEEEe
Confidence 999999999999998653
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=91.22 E-value=0.58 Score=50.99 Aligned_cols=132 Identities=17% Similarity=0.155 Sum_probs=73.2
Q ss_pred cceEEEEEEeecccceEEEEEec-CCCCcEEEEeccceec-----cCCCCCCcceeeecCCCCcEEEEEEeCCCCCC--C
Q 007227 125 GKGSLKLQLINQRSDFSFVLFTN-GLLNPKVVAVSNKVTF-----TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--A 196 (612)
Q Consensus 125 g~~~~~~~l~n~r~~~~f~~~~~-~~~~p~~~a~s~~~~~-----~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~ 196 (612)
+..+.+|.+...-..|.|.+..- ++.. ..| .+.| .-|.+|..+++. ..+.+++.|+|........ -
T Consensus 345 ~~~~ct~~l~~~~t~Y~f~V~A~N~~G~----~~S-~~~~~~~~~v~P~PP~nl~v~-~~s~~sl~LsW~pP~~~~g~~l 418 (488)
T 2q7n_A 345 ETYRLGVQMHPGQEIHNFTLTGRNPLGQ----AQS-AVVINVTERVAPHDPTSLKVK-DINSTVVTFSWYLPGNFTKINL 418 (488)
T ss_dssp SCEEEEEECCSSCCCCEEEEEEEETTEE----EEE-EEECCGGGTBCCCCCEEEEEE-ECSTTCEEEEEEEEEECSSSEE
T ss_pred ceEEEEEcCCCCccEEEEEEEEEeCCCC----ccc-eEEEEecCCCCCCCCeEEEEE-ecCCCEEEEEEeCCCCCCCcce
Confidence 34556666554335677776553 2221 112 1222 245667666652 3457899999987632110 1
Q ss_pred ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCC---ccccceE
Q 007227 197 EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGT---YIWSSEY 273 (612)
Q Consensus 197 ~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~---~~~S~~~ 273 (612)
.-.|+|...+...+.. ..+.. + ...-.+.+.|.+|+|+|.|..||.... .|. ..||+..
T Consensus 419 ~YeV~Yr~~~~~~w~~---~~~~~------------~--~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v 480 (488)
T 2q7n_A 419 LCQIEICKANSKKEVR---NATIR------------G--AEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEK 480 (488)
T ss_dssp EEEEEEBCTTSCCEEE---EEEEE------------C--CEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCC
T ss_pred EEEEEEEECCCCCceE---EEEEe------------c--CCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCE
Confidence 2345666543321110 01110 0 012356679999999999999998775 555 3577788
Q ss_pred EEEcCCC
Q 007227 274 QFKASPY 280 (612)
Q Consensus 274 ~F~T~p~ 280 (612)
.|+|++.
T Consensus 481 ~~~T~e~ 487 (488)
T 2q7n_A 481 RHLTTEA 487 (488)
T ss_dssp CBCCCCC
T ss_pred eEECCCC
Confidence 8988764
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.87 E-value=0.33 Score=53.29 Aligned_cols=98 Identities=14% Similarity=0.142 Sum_probs=58.1
Q ss_pred CCCCCCcceeee-cCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQ-GKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~-~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+.. ....++++|+|....... ...-.|+|...++..+...... ...+...
T Consensus 198 ~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~------------------~~~~~~~ 259 (589)
T 3l5h_A 198 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------------------DTASTRS 259 (589)
T ss_dssp ECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT------------------SSCSCCS
T ss_pred EcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc------------------cCcCcee
Confidence 466787777643 345789999998653210 0123566665443322211000 0012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYI---WSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~---~S~~~~F~T~p~ 280 (612)
...+++|+|++.|.+||......|... ||+...|+|.+.
T Consensus 260 ~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 260 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp EEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 567899999999999999765444433 467777888654
|
| >2lfe_A E3 ubiquitin-protein ligase HECW2; structural genomics, northeast structural genomics consortiu SGC; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.85 E-value=1.1 Score=39.00 Aligned_cols=99 Identities=19% Similarity=0.289 Sum_probs=57.0
Q ss_pred eCCCceEEEcc--cccccCCCcccEEEEEEecC-CCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCccCCCcceEEeccC
Q 007227 41 LDDNAYIKASP--SILGMKGQNSDWLTVEYNSP-NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYS 117 (612)
Q Consensus 41 ~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~-~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 117 (612)
-++..+|++|- -+||.+ |.+.|.|.-- .-.+.||||+|--.. +||. ..+.|+-
T Consensus 31 ~~sRSsLt~S~~~ytiG~~----q~lvI~WDIKEev~a~DWIGLy~ide----~~~~------------n~ld~kn---- 86 (138)
T 2lfe_A 31 SESRSSLTASMYEYTLGQA----QNLIIFWDIKEEVDPSDWIGLYHIDE----NSPA------------NFWDSKN---- 86 (138)
T ss_dssp --CCCEEEESCSEEETTCS----CCEEEEEECCSCCCTTCEEEEEECCS----SCTT------------CCCEECC----
T ss_pred ccccceeEEEeeEEEecCC----CcEEEEEeccCccCccceEEEEEecC----CCcc------------chhhhhc----
Confidence 35556676664 456543 5699999984 788999999997643 3332 1122221
Q ss_pred CCccccccceEEEEEE------eecccceEEEEEecCCCCcEEEEeccceeccCC
Q 007227 118 SPQYKSTGKGSLKLQL------INQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNP 166 (612)
Q Consensus 118 ~~~~~~~g~~~~~~~l------~n~r~~~~f~~~~~~~~~p~~~a~s~~~~~~~~ 166 (612)
-+-..+=+|.+.-++ ..-+.-+.|.+..+-.. .|-|.++.|+..||
T Consensus 87 -Rgvngt~kGqi~W~i~~~~yf~e~eTkiCFKYYhg~Sg--aLRAtTP~iTVkNP 138 (138)
T 2lfe_A 87 -RGVTGTQKGQIVWRIEPGPYFMEPEIKICFKYYHGISG--ALRATTPCITVKNP 138 (138)
T ss_dssp -TTCSSCSEEEEEECCCSSTTCCSSEEEEEEEEEETTTT--EEEEECCCEEEECC
T ss_pred -cccccceeeeEEEEEcCCCccccceeEEEEEEecCccc--ceeecCceEEeeCC
Confidence 111122234443332 12234577888877444 47788888887775
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=90.78 E-value=0.75 Score=47.05 Aligned_cols=89 Identities=13% Similarity=0.010 Sum_probs=48.4
Q ss_pred CCCCcceeeecCCCC-cEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 167 NAPVYPRLAQGKVWN-EMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 167 ~~P~~~~La~~~~~~-~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
.+|..+.+.. .+.+ +++|+|..........-.|+|...++..... ..... ++-.....|
T Consensus 4 ~~P~~l~~~~-~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~i 63 (375)
T 3t1w_A 4 SPPTNLHLEA-NPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVV-----------------HADQSSCTF 63 (375)
T ss_dssp CCCEEEEEEE-ETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCC--EEEEE-----------------ETTCCEEEE
T ss_pred CCCCccEEEe-cCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcc--eeEEc-----------------CCCccEEEE
Confidence 3455555532 2456 9999998764211123466776543321100 00011 112345678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
++|+|++.|.++|..... .++|.....++.
T Consensus 64 ~~L~p~t~Y~~~V~a~~~---~g~s~~~~~~~~ 93 (375)
T 3t1w_A 64 DNLSPGLEYNVSVYTVKD---DKESVPISDTII 93 (375)
T ss_dssp CCCCTTCCEEEEEEEEET---TEECCCEEEEEC
T ss_pred cCCcCCCEEEEEEEEEcC---CCCCCcEEeeEc
Confidence 999999999999987632 234555555443
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.61 E-value=0.81 Score=49.76 Aligned_cols=134 Identities=15% Similarity=0.173 Sum_probs=72.5
Q ss_pred ceEEEEEEeecccceEEEEEec-CCCCcE-EEEeccceeccCCCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEE
Q 007227 126 KGSLKLQLINQRSDFSFVLFTN-GLLNPK-VVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVE 201 (612)
Q Consensus 126 ~~~~~~~l~n~r~~~~f~~~~~-~~~~p~-~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~ 201 (612)
.-+..|........|.|.+-.. ++..-. .+... ......|.+|..+++. ..+.+++.|+|....... .-.-.|+
T Consensus 341 ~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~~~~-~~~~VkP~PP~nl~v~-~~~stsl~LsW~~P~~~~~~~L~YeVr 418 (483)
T 3e0g_A 341 SYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILVN-ITEKVYPHTPTSFKVK-DINSTAVKLSWHLPGNFAKINFLCEIE 418 (483)
T ss_dssp CEEEEEECCTTCCCEEEEEEEECSSCEEEEEEEEC-GGGGBCCCCCEEEEEC-CSSSSSCCEEEECCSCCTTSBCCCEEE
T ss_pred EEEEEEccCCCCcEEEEEEEEEeCCCCcccceEEE-eccccCCCCCeeeEEE-EecCCeEEEEECCCCCCCCceEEEEEE
Confidence 3455665554455677766543 222100 00110 0112356677666653 235789999998764211 1234678
Q ss_pred EccCCCCC-ccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEEEEc
Q 007227 202 WGPKGGDR-TYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGT---YIWSSEYQFKA 277 (612)
Q Consensus 202 yg~~~~~~-~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~---~~~S~~~~F~T 277 (612)
|...+... +.. .++. | ...-.+.+.|.+|+|+|+|..||... .+|. ..||+...|+|
T Consensus 419 Yr~~~~~~~~~~----vsv~------------~--~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T 479 (483)
T 3e0g_A 419 IKKSNSVQEQRN----VTIQ------------G--VENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLT 479 (483)
T ss_dssp EECSSSCCCEEE----CCCB------------C--CSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCC
T ss_pred EEECCCCCceEE----EEEe------------c--cCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeEC
Confidence 87654321 110 0000 0 00123456789999999999999987 4444 35778888988
Q ss_pred CCC
Q 007227 278 SPY 280 (612)
Q Consensus 278 ~p~ 280 (612)
+.+
T Consensus 480 ~E~ 482 (483)
T 3e0g_A 480 TEA 482 (483)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=89.74 E-value=6.3 Score=39.93 Aligned_cols=93 Identities=16% Similarity=0.129 Sum_probs=54.5
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCcc----EEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
-|.+|..+.+ .....++++|.|..... ....+ .|+|...+...+.. .. ..+..
T Consensus 195 ~P~~P~~~~~-~~~~~~~~~l~w~~p~~-~~g~pi~~y~v~~~~~~~~~~~~------~~---------------~~~~~ 251 (389)
T 2jll_A 195 VPSSPYGVKI-IELSQTTAKVSFNKPDS-HGGVPIHHYQVDVKEVASEIWKI------VR---------------SHGVQ 251 (389)
T ss_dssp CCCCCEEEEE-EEECSSCEEEEEECCSC-CTTSCEEEEEEEEEETTCSCCEE------EE---------------CSTTC
T ss_pred CCCCCcceEE-eeccCCEEEEEEeCCCC-CCCcceEEEEEEEEECCCcccEE------ee---------------ccCCc
Confidence 3445544444 22346899999985321 11223 45665544322210 00 01123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
....|.+|+|++.|.|+|......|...+|....|+|.+.
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 4567899999999999998765445556677788888653
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=89.42 E-value=0.94 Score=42.07 Aligned_cols=38 Identities=11% Similarity=-0.145 Sum_probs=27.3
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCcc-ccceEEEEcC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYI-WSSEYQFKAS 278 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~-~S~~~~F~T~ 278 (612)
...+|++|+|++.|.+||......|... +|+...++|.
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 164 NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred cEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 4567899999999999998764444444 3556666664
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=89.01 E-value=0.61 Score=49.90 Aligned_cols=74 Identities=20% Similarity=0.378 Sum_probs=44.6
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
..|...|+ ...+.++++|.|..+.+..-..-.|+|.+++... .....+- ++--.+++|+
T Consensus 371 ~~~~~l~~-~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~---~~~~~~~-----------------~~~~~~~~i~ 429 (461)
T 3csg_A 371 SVPTNLEV-VAATPTSLLISWDASYSSSVSYYRITYGETGGNS---PVQEFTV-----------------PGSKSTATIS 429 (461)
T ss_dssp CSSCCCEE-EEECSSCEEEECCCTTGGGCSEEEEEEEETTCCS---CCEEEEE-----------------ETTCCEEEEC
T ss_pred CCCcceEE-eccCCCeEEEEecCCCCCcceEEEEEEEECCCCc---cceEEEe-----------------cCCCceEEec
Confidence 35666676 4446789999997752101113456666653211 0000110 1223678999
Q ss_pred CCCCCCEEEEEEeee
Q 007227 247 ELWPNAMYTYKLGHR 261 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~ 261 (612)
||+|||.|..+|...
T Consensus 430 ~L~p~t~Y~~~v~a~ 444 (461)
T 3csg_A 430 GLSPGVDYTITVYAY 444 (461)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred CCCCCCEEEEEEEEE
Confidence 999999999999976
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=88.79 E-value=3.2 Score=42.18 Aligned_cols=93 Identities=16% Similarity=0.144 Sum_probs=50.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|..+.+ ...+.++++|.|..........-.|+|...+.... ...... .+-....++
T Consensus 187 ~~~p~~l~~-~~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i 245 (375)
T 3t1w_A 187 VPPPTDLRF-TNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEED---VAELSI-----------------SPSDNAVVL 245 (375)
T ss_dssp CCCCEEEEE-ESCCSSCEEEEEECCSSCCCCEEEEEEEEGGGTTC---CEEEEE-----------------CTTCCEEEE
T ss_pred CCCCceeEE-EecccCEEEEEEcCCCCCCccEEEEEEEeCCCCCC---cEEEEc-----------------CCCcCEEEe
Confidence 345655554 23357999999987532122334666664332110 000111 112345678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
++|+|++.|.++|......|.... ....++|.|.
T Consensus 246 ~~L~p~t~Y~~~V~A~~~~g~s~~-~~~~~~t~p~ 279 (375)
T 3t1w_A 246 TNLLPGTEYVVSVSSVYEQHESTP-LRGRQKTGLD 279 (375)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCC-EEEEEECCCC
T ss_pred CCCCCCCEEEEEEEEEcCCCcCCc-eeeEEecCCC
Confidence 999999999999987643332221 2344566654
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.04 E-value=1.2 Score=37.91 Aligned_cols=74 Identities=15% Similarity=0.146 Sum_probs=42.3
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++... + ++++|+|.-....+ -..-.|+|....... ..... .+-...
T Consensus 17 ~P~~P~~l~~~~~-~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~~~-----~~~~~-----------------~~~~~~ 72 (116)
T 2edb_A 17 VPDQPSSLHVRPQ-T-NCIIMSWTPPLNPNIVVRGYIIGYGVGSPYA-----ETVRV-----------------DSKQRY 72 (116)
T ss_dssp CCCCCSCEEEEEC-S-SCEEEEECCCSCTTBCCCEEEEEEEESSTTS-----EEEEE-----------------ETTCCE
T ss_pred CCCCCCCeEEEEC-C-CEEEEEEcCCCCCCCceeEEEEEEEeCCCCe-----EEEEe-----------------CCCeeE
Confidence 3556776666433 4 89999998753211 012345665321100 00111 112245
Q ss_pred EEecCCCCCCEEEEEEeeec
Q 007227 243 GFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
.+|+||+|++.|.+||....
T Consensus 73 ~~l~~L~p~t~Y~~~V~A~n 92 (116)
T 2edb_A 73 YSIERLESSSHYVISLKAFN 92 (116)
T ss_dssp EEECSCCSSSBEEEEEEEEE
T ss_pred EEeCCCCCCCEEEEEEEEEe
Confidence 67899999999999998763
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=87.56 E-value=11 Score=36.40 Aligned_cols=65 Identities=15% Similarity=0.138 Sum_probs=37.9
Q ss_pred CCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEe
Q 007227 180 WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLG 259 (612)
Q Consensus 180 ~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~ 259 (612)
.++++|+|.-... ....-.|+|...+..... ...+... .........+++|+|++.|.+||.
T Consensus 114 ~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~~~-------------~~~~~~~~~~~~L~p~t~Y~~~V~ 175 (290)
T 3l5i_A 114 DNMLWVEWTTPRE-SVKKYILEWCVLSDKAPC----ITDWQQE-------------DGTVHRTYLRGNLAESKCYLITVT 175 (290)
T ss_dssp TTEEEEEEECCSS-CCCEEEEEEEEECSSSCC----CCEEEEE-------------ETTCSEEECCSCCCTTCEEEEEEE
T ss_pred CCeEEEEEeCCCC-CCCcEEEEEEECCCCCCC----CcCeEEc-------------cCCCcceEEecCcCCccEEEEEEE
Confidence 3799999987643 122346777654332110 0011100 012234566899999999999998
Q ss_pred eec
Q 007227 260 HRL 262 (612)
Q Consensus 260 ~~~ 262 (612)
...
T Consensus 176 A~n 178 (290)
T 3l5i_A 176 PVY 178 (290)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=86.88 E-value=1.2 Score=38.02 Aligned_cols=37 Identities=14% Similarity=-0.016 Sum_probs=29.6
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
.+.+. |+|++.|.+||......|...+|+...|+|..
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCC
Confidence 45566 99999999999876556666788888899865
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.64 E-value=4.5 Score=45.69 Aligned_cols=95 Identities=13% Similarity=0.009 Sum_probs=53.2
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCC----CCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGI----NEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~----~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
.+|..+.+ ...+.++++|+|.-.... ....-.|+|............ .... ..++....
T Consensus 361 ~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~---~~~~-------------~~~~~~~~ 423 (731)
T 2v5y_A 361 RGPRKLEV-VEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVRE---EVSW-------------DTENSHPQ 423 (731)
T ss_dssp CCCEEEEE-EEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEE---EEEC-------------CSSCSSCE
T ss_pred CCCceeEE-EeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccce---eEEE-------------EecCCcce
Confidence 45655544 233578999999875210 001235777654321110000 0000 01122345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
.+|++|+|++.|.+||......|.. .|....++|..
T Consensus 424 ~~i~~L~p~t~Y~~~V~A~n~~G~s-~S~~~~~~T~~ 459 (731)
T 2v5y_A 424 HTITNLSPYTNVSVKLILMNPEGRK-ESQELIVQTDE 459 (731)
T ss_dssp EEECSCCSSCEEEEEEEEECSSCEE-ECCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCCCC-CCceEEEEccC
Confidence 6899999999999999876444443 47778888864
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.41 E-value=3 Score=47.06 Aligned_cols=36 Identities=17% Similarity=0.305 Sum_probs=25.1
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcc-ccceEEEEc
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYI-WSSEYQFKA 277 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~-~S~~~~F~T 277 (612)
.++|++|+|++.|.|||......|... .+....|+|
T Consensus 224 ~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t 260 (680)
T 1zlg_A 224 RVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRS 260 (680)
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEc
Confidence 467899999999999998764444222 234455666
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=85.37 E-value=1.7 Score=40.68 Aligned_cols=91 Identities=16% Similarity=0.235 Sum_probs=51.8
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|....+.... .+.+.|.|........-.-.|+|+...+..+... .. .......
T Consensus 98 kP~pP~~l~~~~~~-~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~----~~------------------~~~~~~~ 154 (199)
T 2b5i_C 98 IPWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFS 154 (199)
T ss_dssp ECCCCEEEEEEEEE-TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE----EE------------------CSSCEEE
T ss_pred ecCCCcEEEEEECC-CCCEEEEECCCCCCCceEEEEEEeecCCcccEEE----ec------------------cCceEEE
Confidence 46677766664432 4799999998742111234577776443332211 00 0123456
Q ss_pred ecCCCCCCEEEEEEeeecCC---CCc---cccceEEEEcC
Q 007227 245 LRELWPNAMYTYKLGHRLFN---GTY---IWSSEYQFKAS 278 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~---g~~---~~S~~~~F~T~ 278 (612)
|.+|+|+++|..||...... ... .||+...|.|.
T Consensus 155 l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 155 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp ECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred ecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 79999999999999987422 122 35556666653
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=84.97 E-value=2.2 Score=42.68 Aligned_cols=105 Identities=14% Similarity=0.188 Sum_probs=56.1
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++. ...+++.|.|........ -.-.|+|...++..+.. .......|....- .........
T Consensus 199 ~P~pP~~l~~~--~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~-----~~~~~~~c~~~~~---~~~~~~~~~ 268 (314)
T 3bpo_C 199 KPDPPHIKNLS--FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNV-----FYVQEAKCENPEF---ERNVENTSC 268 (314)
T ss_dssp ECCCCEEEEEE--EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEE-----EEESCCCCCCTTS---SCCCSSEEE
T ss_pred eeCCCCEEEEE--EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceE-----Eeccccccccccc---ccccCCceE
Confidence 36677766664 345799999988742110 12346666544332210 0110111221000 001123567
Q ss_pred EEecCCCCCCEEEEEEeeecC------CCC-ccccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLF------NGT-YIWSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~------~g~-~~~S~~~~F~T~p 279 (612)
+.|.+|+|+++|..||..... .|. ..||+...|.+.+
T Consensus 269 ~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~~ 312 (314)
T 3bpo_C 269 FMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKR 312 (314)
T ss_dssp EEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCCC
T ss_pred EEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEecccC
Confidence 789999999999999997742 232 3466677775543
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=84.69 E-value=2.4 Score=41.56 Aligned_cols=93 Identities=16% Similarity=0.202 Sum_probs=53.8
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|....+... ..+.+.|.|........-.-.|+|...++..+... .. .......
T Consensus 136 kP~PP~nl~v~~~-~~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~----~~------------------~~~~~~~ 192 (247)
T 2erj_C 136 IPWAPENLTLHKL-SESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFS 192 (247)
T ss_dssp ECCCCEEEEEEES-SSSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEE----EE------------------CSSCEEE
T ss_pred EeCCCCeEEEEEC-CCCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEE----ec------------------CCceEEE
Confidence 4677776666543 34799999998742111123477776444333211 00 0113456
Q ss_pred ecCCCCCCEEEEEEeeecCCC---Cc---cccceEEEEcCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNG---TY---IWSSEYQFKASPY 280 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g---~~---~~S~~~~F~T~p~ 280 (612)
|.+|+|+++|..||......+ .. .||+...|.|.+.
T Consensus 193 l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 193 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp ESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred ecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 799999999999999875321 22 4667778887543
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=84.26 E-value=0.65 Score=38.74 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=37.5
Q ss_pred CCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEE
Q 007227 179 VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKL 258 (612)
Q Consensus 179 ~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv 258 (612)
+.++++|.|..... .-..-.|+|....+... ..... -+|-.-.+.|+||+|||+|.-+|
T Consensus 18 t~~S~~lsW~~p~~-~v~~Y~I~y~~~~g~~~---~~~~~-----------------v~g~~~s~~l~~L~PgT~Y~V~v 76 (95)
T 2h41_A 18 TASSFVVSWVSASD-TVSGFRVEYELSEEGDE---PQYLD-----------------LPSTATSVNIPDLLPGRKYIVNV 76 (95)
T ss_dssp GGGCEEEECCCSCT-TEEEEEEEEEETTTCCC---CEEEE-----------------EETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCeEEEEECCCCC-CccEEEEEEEeCCCCCc---ceEEE-----------------CCCCccEEEECCCCCCCEEEEEE
Confidence 57899999987632 11234566665433110 00011 12334567899999999999988
Q ss_pred eee
Q 007227 259 GHR 261 (612)
Q Consensus 259 ~~~ 261 (612)
...
T Consensus 77 ~a~ 79 (95)
T 2h41_A 77 YQI 79 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=84.13 E-value=6.5 Score=41.12 Aligned_cols=96 Identities=20% Similarity=0.233 Sum_probs=54.1
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCC--------ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccC
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEA--------EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~--------~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 236 (612)
-|.+|..+.+.... +.+.|+|......... .-.|+|+..+ ..+.... +.. .
T Consensus 108 ~p~pP~~l~v~~~~--~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~---~~~---------------~ 166 (419)
T 2gys_A 108 QPPEPRDLQISTDQ--DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAA---ILL---------------S 166 (419)
T ss_dssp CCCCCEEEEEEEET--TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCE---EEE---------------E
T ss_pred cCCCCCceEEEecC--CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhhee---eec---------------c
Confidence 56678777665443 6999999987531100 1245555543 2221110 000 0
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCC---CCc---cccceEEEEcCCCC
Q 007227 237 PGYIHTGFLRELWPNAMYTYKLGHRLFN---GTY---IWSSEYQFKASPYP 281 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~---g~~---~~S~~~~F~T~p~~ 281 (612)
....+.+.+.+|.|+++|..||...... +.. .||+...|+|++..
T Consensus 167 ~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~ 217 (419)
T 2gys_A 167 NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD 217 (419)
T ss_dssp SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC
T ss_pred cceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc
Confidence 1123333345999999999999977421 222 35688999998764
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=83.96 E-value=0.53 Score=37.80 Aligned_cols=41 Identities=20% Similarity=0.332 Sum_probs=27.4
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
||-.+.-+|.||+||.+|.=++.+-...|... ...+.|+|-
T Consensus 34 Pgh~nSYtIsGLkPGvtYegQLisV~r~g~~E-vtrfdfTT~ 74 (89)
T 1q38_A 34 PGHLNSYTIKGLKPGVVYEGQLISIQQYGHQE-VTRFDFTTT 74 (89)
T ss_dssp CSSSSCCCCCCCCTTCCEEEEEEEECTTSCCC-EEEEEECSS
T ss_pred CCccceEEEeccCCCcEEEEEEEeeeecccCC-ceEEEEEec
Confidence 45566668999999999999998764333211 234566653
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=82.29 E-value=2.1 Score=40.41 Aligned_cols=98 Identities=14% Similarity=0.111 Sum_probs=48.1
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCC-C----CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCC
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGI-N----EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPG 238 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~-~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 238 (612)
.-|.+|....+... ..+...|+|...... . .-.-.|+|...++.... ..... ...+
T Consensus 96 Vkp~PP~nl~~~~~-~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~-----~~~~~-------------~~~~ 156 (207)
T 1iar_B 96 VKPRAPGNLTVHTN-VSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADF-----RIYNV-------------TYLE 156 (207)
T ss_dssp BCCCCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCE-----EEEEE-------------CSSC
T ss_pred cccCCCCCeEEEEc-cCCCEEEEECCCCCccccccccEEEEEEEccCCCchhh-----eeeee-------------ecCC
Confidence 35677776666532 346899999887421 0 01245666654332110 00110 0113
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCCC
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASPY 280 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~---~~S~~~~F~T~p~ 280 (612)
......+.+|.||++|.-||......... .||....|+|.+.
T Consensus 157 ~~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 157 PSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CEEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred cEEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 34556678999999999999987432122 4677889998764
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.24 E-value=3.2 Score=38.94 Aligned_cols=39 Identities=23% Similarity=0.169 Sum_probs=30.8
Q ss_pred EEEecCCCCCCEEEEEEeeecC--CCCccccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLF--NGTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~--~g~~~~S~~~~F~T~p~ 280 (612)
.++|++|+|++.|..+|..... .+...||+...|+|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 4789999999999999986532 34556888899998764
|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E | Back alignment and structure |
|---|
Probab=81.68 E-value=2.3 Score=49.71 Aligned_cols=40 Identities=15% Similarity=0.056 Sum_probs=30.5
Q ss_pred EEEEecCCCCCCEEEEEEee-ecCCCC----ccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGH-RLFNGT----YIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~-~~~~g~----~~~S~~~~F~T~p~ 280 (612)
...+|++|+|+|.|.|||.. -...|. ..+|+...|+|.+.
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~ 593 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDAT 593 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCC
Confidence 55789999999999999987 322333 45788888998663
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.25 E-value=11 Score=42.59 Aligned_cols=40 Identities=13% Similarity=-0.045 Sum_probs=30.6
Q ss_pred EEEEecCCCCCCEEEEEEeee--cCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHR--LFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~--~~~g~~~~S~~~~F~T~p~ 280 (612)
...+|++|+|++.|.|||... ...|...+|....++|.+.
T Consensus 316 ~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~ 357 (731)
T 2v5y_A 316 TSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCA 357 (731)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCC
T ss_pred ceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCC
Confidence 456789999999999999865 4445556777788888653
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=80.53 E-value=2.3 Score=47.14 Aligned_cols=75 Identities=13% Similarity=0.166 Sum_probs=48.2
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCC--CCC-CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYG--INE-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~--~~~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..|.+ ...+.++++++|..... ..+ ..-.||+...++..|...+.+ ++.
T Consensus 9 ~P~pP~~P~v-~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~~------------------~~t---- 65 (573)
T 3uto_A 9 EPEPPRFPII-ENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKS------------------RYT---- 65 (573)
T ss_dssp CCCCCEEEEE-EEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEEE------------------SSS----
T ss_pred CCccCCCCEE-EEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeccc------------------cCC----
Confidence 4667877765 33357899999987532 111 124677777776666433210 011
Q ss_pred EEEecCCCCCCEEEEEEeeec
Q 007227 242 TGFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
..+++||.||+.|.+||....
T Consensus 66 ~~~V~~L~~g~~Y~FRV~A~N 86 (573)
T 3uto_A 66 YTTIEGLRAGKQYEFRIIAEN 86 (573)
T ss_dssp EEEECCCCTTCEEEEEEEEEE
T ss_pred EEEeCCCCCCCcEeEEEEEEc
Confidence 246899999999999999763
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=80.52 E-value=15 Score=38.16 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=29.1
Q ss_pred EEEecCCCCCCEEEEEEeeec--CCCCccccceEEEEcCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRL--FNGTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~--~~g~~~~S~~~~F~T~p 279 (612)
..+|++|+|++.|..||.... ..|...+|+...++|..
T Consensus 164 ~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 164 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp EEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred EEEEcCCCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 467999999999999998753 13445678777888764
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=80.39 E-value=5.4 Score=43.81 Aligned_cols=42 Identities=12% Similarity=-0.017 Sum_probs=30.4
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEEEEcCCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGT---YIWSSEYQFKASPYP 281 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~---~~~S~~~~F~T~p~~ 281 (612)
...++|++|+|++.|.+||......|. ..++....++|.+.+
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~ 443 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTE 443 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccC
Confidence 356789999999999999987633332 224667888887653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 612 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 3e-56 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 4e-22 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 2e-16 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 3e-16 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 9e-06 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 2e-05 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 4e-04 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 0.002 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 190 bits (484), Expect = 3e-56
Identities = 69/324 (21%), Positives = 118/324 (36%), Gaps = 31/324 (9%)
Query: 281 PGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN 340
G D + GD+G+ S T K V +GD+ YA+
Sbjct: 2 TGLDVPYTFGLIGDLGQSFD------------SNTTLSHYELSPKKGQTVLFVGDLSYAD 49
Query: 341 GYIS----QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENM 396
Y + +WD + E + P++ +GNHE ++ + ++
Sbjct: 50 RYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSY----RYHV 105
Query: 397 FYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLA 456
Y +++ + FWYS + + + GT QY +++ L V R + PWLI L
Sbjct: 106 PYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLM 165
Query: 457 HRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTN 516
H L S + + R + + KYKVD+ GHVH YER +
Sbjct: 166 HSPLYNSYNHHF-----MEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKI 220
Query: 517 KE-KHYYKGSLNGTIHIAAGGAG---ASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNL 572
+ ++I G AG S Q +S +R+ G + ++
Sbjct: 221 TNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHA 280
Query: 573 LFEYKKSRDGKVY--DSFRISRDY 594
F + +++DG DS +
Sbjct: 281 HFSWNRNQDGVAVEADSVWFFNRH 304
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 95.2 bits (235), Expect = 4e-22
Identities = 49/321 (15%), Positives = 86/321 (26%), Gaps = 44/321 (13%)
Query: 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQW 346
+ GD G G + + + +K D + +GD Y G
Sbjct: 7 FVAVGDWG-----GVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK 61
Query: 347 D-QFTAQIE-----PIASTVPYMIASGNHERDW-PGTGSFYGNMDSGGECGVLVENM-FY 398
D +F E P VP+ + +GNH+ Y + + F
Sbjct: 62 DKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFK 121
Query: 399 VPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHR 458
+P N + + D D E LA + +Q
Sbjct: 122 IPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDY 178
Query: 459 VLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKE 518
VL +++ + L L +KV + GH HN + +
Sbjct: 179 VLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDE--------- 229
Query: 519 KHYYKGSLNGTIHIAAGGAGASLSPFTTLQTT-------WSLYRDYDHGFVKLTAFDHSN 571
NG + +G L+ + GF +
Sbjct: 230 --------NGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVE-ITPKE 280
Query: 572 LLFEYKKSRDGKVYDSFRISR 592
+ Y ++ GK ++ R
Sbjct: 281 MSVTYIEA-SGKSLFKTKLPR 300
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 73.4 bits (180), Expect = 2e-16
Identities = 24/121 (19%), Positives = 39/121 (32%), Gaps = 22/121 (18%)
Query: 163 FTNP---NAPVYPRLAQG-KVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLT 218
F P NAP + QG V M ++W + V + + R G ++
Sbjct: 10 FRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEP--GSSAVRYWSEKNGRKRIAKGKMS 67
Query: 219 FGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278
G+IH +R+L N Y Y++ G + + F
Sbjct: 68 ----------TYRFFNYSSGFIHHTTIRKLKYNTKYYYEV------GLRNTTRRFSFITP 111
Query: 279 P 279
P
Sbjct: 112 P 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 73.1 bits (179), Expect = 3e-16
Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 23/131 (17%)
Query: 150 LNPKVVAVSNKVTFTNPNAPVYPRLAQG-KVWNEMTVTWTSGYGINEAEPFVEWGPKGGD 208
+ V AV + NAP + QG + ++WT+ Y V + +
Sbjct: 11 WDSDVFAVPS-----GYNAPQQVHITQGDYEGRGVIISWTTPYD-KAGANKVFYWSENSK 64
Query: 209 RTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYI 268
GT+ +IH +++L + Y Y+LG
Sbjct: 65 SQKRAMGTVV----------TYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGD------ 108
Query: 269 WSSEYQFKASP 279
++ F P
Sbjct: 109 AKRQFWFVTPP 119
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 45.1 bits (105), Expect = 9e-06
Identities = 16/193 (8%), Positives = 44/193 (22%), Gaps = 19/193 (9%)
Query: 311 RGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368
G L + ++ D + IG++ + F + Y+ G
Sbjct: 15 MGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVP--GP 72
Query: 369 HERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWR 428
+ + + ++ M V G+ + E +
Sbjct: 73 QDAPI------WEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEH 126
Query: 429 EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQ 488
E ++ + + + + Y G + L +
Sbjct: 127 EALRYPAWVAEYRLKALWELKDYPKIFLFHTMPY---------HKGLNEQGSHEVAHLIK 177
Query: 489 KYKVDIAVFGHVH 501
+ + +
Sbjct: 178 THNPLLVLVAGKG 190
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 44.8 bits (104), Expect = 2e-05
Identities = 35/272 (12%), Positives = 72/272 (26%), Gaps = 64/272 (23%)
Query: 292 FGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQF 349
+ D+ D + + RGS + R + + + V +GDI +G+ + D
Sbjct: 14 YADIE-DGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDI--IDGHNRRRDAS 70
Query: 350 TAQIEPIAST-----VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR 404
++ + + V GNH ++ + +
Sbjct: 71 DRALDTVMAELDACSVDVHHVWGNH--EFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDD 128
Query: 405 AKFWYSTDYGMFRFCIADT----------------------------------------- 423
+ + FRF + D
Sbjct: 129 IYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGL 188
Query: 424 -----EQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPM 478
+ + +Q ++++ L D +++ LIF V ++D
Sbjct: 189 EQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAAD------PICLAWN 242
Query: 479 GRESLQKLWQKYKVDIAVFGHVHNYERICPIY 510
L L V + GH H+ R
Sbjct: 243 HEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSS 274
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 40.1 bits (92), Expect = 4e-04
Identities = 25/187 (13%), Positives = 43/187 (22%), Gaps = 19/187 (10%)
Query: 318 RQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTG 377
QL + D V GDI G ++ + + P + GNH+
Sbjct: 33 SQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSLN--YPLYLIPGNHDDKALFLE 89
Query: 378 SFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFI 437
+ ++ D+ I + +G I
Sbjct: 90 YLQ-------------PLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETI 136
Query: 438 EHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVF 497
A + H A A G L + + +
Sbjct: 137 SWLEAQLFEGGDKPATIFMHHPPLPLG---NAQMDPIACENGHRLLALVERFPSLTRIFC 193
Query: 498 GHVHNYE 504
GH H+
Sbjct: 194 GHNHSLT 200
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 38.5 bits (88), Expect = 0.002
Identities = 16/216 (7%), Positives = 49/216 (22%), Gaps = 35/216 (16%)
Query: 312 GSLNTTRQLIQDLKN--IDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--------- 360
+ +L + DI+ +G+I ++++ V
Sbjct: 13 ERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYII 72
Query: 361 ---------------PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRA 405
+ G ++ F + + R
Sbjct: 73 ETLDKFFREIGELGVKTFVVPGKND---APLKIFLRAAYEAETAYPNIRVLHEGFAGWRG 129
Query: 406 KFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSD 465
+F G+ + + + +I + + ++ + + + +
Sbjct: 130 EFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRL---VTIFYTPP--IGE 184
Query: 466 LSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVH 501
+ ++A+ GHV
Sbjct: 185 FVDRTPEDPKHHGSAVVNTIIK-SLNPEVAIVGHVG 219
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 612 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.89 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.85 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.83 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.79 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.76 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.57 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.54 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.04 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.0 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.99 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.91 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.72 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.71 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.35 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.04 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.9 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.64 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.55 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.49 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.47 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.34 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.28 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.24 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 97.2 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 97.18 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.17 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.17 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.16 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.15 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.1 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.09 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.97 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.91 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.9 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.87 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.85 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.83 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.79 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 96.77 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 96.75 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.72 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.71 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.63 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 96.63 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.63 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 96.62 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 96.59 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.56 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.56 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.55 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.51 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.49 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 96.41 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.36 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 96.33 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.33 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 96.31 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.3 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.28 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.25 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 96.23 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.21 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 96.2 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.16 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 96.13 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.1 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.07 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.05 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.04 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.03 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.02 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 95.99 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.96 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.92 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 95.86 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 95.85 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.83 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 95.81 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.81 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.78 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.74 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 95.7 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 95.68 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 95.61 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.6 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.58 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 95.35 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.33 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 95.26 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.21 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 94.99 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 94.89 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 94.81 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 94.8 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 94.68 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 94.22 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 94.14 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 94.14 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 93.17 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 92.67 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 92.45 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 92.31 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 91.11 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 89.84 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 88.16 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 88.11 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 87.88 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 87.83 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 85.1 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 83.01 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=6e-55 Score=453.93 Aligned_cols=289 Identities=26% Similarity=0.400 Sum_probs=237.9
Q ss_pred CCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCc----ccHHHHHHHhhhccc
Q 007227 282 GQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIA 357 (612)
Q Consensus 282 g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~----~~~wd~f~~~i~~l~ 357 (612)
|++.++||+++||+|... ....++..+.....+||||||+||++|+++. ..+|++|++.++++.
T Consensus 3 g~~~p~~F~v~GD~g~~~------------~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~ 70 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSF------------DSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSV 70 (312)
T ss_dssp CSSCCEEEEEECSCCSBH------------HHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEeeCCCCC------------chHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHh
Confidence 446679999999998642 1234555554445789999999999997664 468999999999999
Q ss_pred cCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCC---CCCceEEEEEeCCEEEEEEcCCCCCCCCHHHH
Q 007227 358 STVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQY 434 (612)
Q Consensus 358 ~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~---~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~ 434 (612)
+.+|+|+++||||+++... ....++..++..+|.||.+ ...+.||+|++|++|||+||++..+..+++|+
T Consensus 71 ~~~P~~~~~GNHD~~~~~~-------~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~ 143 (312)
T d2qfra2 71 AYQPWIWTAGNHEIEFAPE-------INETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQY 143 (312)
T ss_dssp TTSCEEECCCGGGTCCBGG-------GTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHH
T ss_pred hcceEEEeccccccccccc-------ccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHH
Confidence 9999999999999864221 1223455677888999964 34577999999999999999999888889999
Q ss_pred HHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCcee
Q 007227 435 RFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNIC 514 (612)
Q Consensus 435 ~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~ 514 (612)
+||+++|++++|+++||+||++|+|+ |++......+ .+.+ |+.|++||.+++|||+|+||+|.|||++|++++++
T Consensus 144 ~WL~~~L~~~~~~~~~w~iv~~H~P~-y~~~~~~~~~---~~~~-r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~ 218 (312)
T d2qfra2 144 TWLKKELRKVKRSETPWLIVLMHSPL-YNSYNHHFME---GEAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAY 218 (312)
T ss_dssp HHHHHHHHTCCTTTCCEEEEECSSCS-SCCBSTTTTT---THHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCC
T ss_pred HHHHHHHHHHhhcCCCEEEEEccccc-cccCCCCccc---chhH-HHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcc
Confidence 99999999998889999999999999 8875432222 2345 89999999999999999999999999999999886
Q ss_pred ccC-CCccccCCCCCeEEEEECCCCCC---CCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCcEE--EEE
Q 007227 515 TNK-EKHYYKGSLNGTIHIAAGGAGAS---LSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVY--DSF 588 (612)
Q Consensus 515 ~~~-~~~~y~~~~~g~vyiv~G~gG~~---l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~v~--D~f 588 (612)
... .......+++||||||+|+||+. ...+..++|.|+++++.+|||++|+++|+|+|.++|+++.||+++ |+|
T Consensus 219 ~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~ 298 (312)
T d2qfra2 219 KITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSV 298 (312)
T ss_dssp CSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEE
T ss_pred cccCCccccccCCCcCEEEEECcCCCcccccccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEE
Confidence 533 23333346789999999999964 245556788999999999999999999999999999999999987 999
Q ss_pred EEEecC
Q 007227 589 RISRDY 594 (612)
Q Consensus 589 ~i~k~~ 594 (612)
||.|++
T Consensus 299 ~i~~~~ 304 (312)
T d2qfra2 299 WFFNRH 304 (312)
T ss_dssp EEECTT
T ss_pred EEEeCC
Confidence 999986
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=2.2e-33 Score=285.56 Aligned_cols=262 Identities=16% Similarity=0.220 Sum_probs=175.9
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcc----cHHHHHHHhh--hccccC
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI----SQWDQFTAQI--EPIAST 359 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~----~~wd~f~~~i--~~l~~~ 359 (612)
.+||+++||+|......... ..+......+.+.+++ .+|||||++||++|++|.. .+|.++.+.+ ......
T Consensus 4 ~~~F~vigD~g~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~ 80 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHT--AREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRN 80 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSC--HHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTT
T ss_pred CeEEEEEecCCCCCCccccc--HHHHHHHHHHHHHHhh-CCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcC
Confidence 39999999998765432111 0010011222333332 6899999999999987643 4455544433 234578
Q ss_pred CCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEe------CCEEEEEEcCCCC-------
Q 007227 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDY------GMFRFCIADTEQD------- 426 (612)
Q Consensus 360 vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~------G~v~Fi~LDT~~~------- 426 (612)
+|+|+++||||+...... .+.-.....++.+|. .||++.+ ++++|+++|+...
T Consensus 81 ~P~~~~~GNHD~~~~~~~---------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~ 146 (302)
T d1utea_ 81 VPWHVLAGNHDHLGNVSA---------QIAYSKISKRWNFPS-----PYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDF 146 (302)
T ss_dssp CCEEECCCHHHHHSCHHH---------HHHGGGTSTTEECCS-----SSEEEEEECTTSSCEEEEEECCHHHHHCCGGGS
T ss_pred CceEEeeccccccccccc---------ccchhhccccccCCC-----cccceeecccCCCCcEEEEEccceeEeeccccc
Confidence 999999999997532110 000011223344442 3566654 3699999997421
Q ss_pred ----------CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEE
Q 007227 427 ----------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAV 496 (612)
Q Consensus 427 ----------~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl 496 (612)
...+.+|++||+++|++ ++.+|+|++.|+|+ |+...+ + . .... ++.|++||.+++|+++|
T Consensus 147 ~~~~~~~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~-~~~~~~-~---~-~~~~-~~~~~~ll~~~~v~~~~ 216 (302)
T d1utea_ 147 VSQQPERPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPV-WSIAEH-G---P-THCL-VKQLLPLLTTHKVTAYL 216 (302)
T ss_dssp TTCSCCSCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCS-SCCSSS-C---C-CHHH-HHHTHHHHHHTTCSEEE
T ss_pred ccccccccccchhHHHHHHHHHHHHHh---hccCceEEEEeccc-cccCCC-C---C-chhh-hhhhhHHHHhcCceEEE
Confidence 01247899999999998 46789999999999 776432 1 1 1233 88999999999999999
Q ss_pred ecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCC------CCCCce-eeeeCCceEEEEEEecC
Q 007227 497 FGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTT------LQTTWS-LYRDYDHGFVKLTAFDH 569 (612)
Q Consensus 497 sGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~------~~~~ws-~~~~~~~Gy~~l~v~n~ 569 (612)
+||+|.|+|+.+ .+++.||++|+||........ ..+.+. ......+||++++| ++
T Consensus 217 ~GH~H~~~r~~~-----------------~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v-~~ 278 (302)
T d1utea_ 217 CGHDHNLQYLQD-----------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TP 278 (302)
T ss_dssp ECSSSSEEEEEC-----------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-CS
T ss_pred eCCCcceEEEec-----------------CCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEEE-EC
Confidence 999999999862 367889999988865322111 111222 12346789999999 78
Q ss_pred CeEEEEEEECCCCcEEEEEEEEec
Q 007227 570 SNLLFEYKKSRDGKVYDSFRISRD 593 (612)
Q Consensus 570 ~~L~~~~~~~~dG~v~D~f~i~k~ 593 (612)
++|+++|+ +.+|+++|+++|.|+
T Consensus 279 ~~l~~~~~-~~~G~~~~~~~~~~~ 301 (302)
T d1utea_ 279 KEMSVTYI-EASGKSLFKTKLPRR 301 (302)
T ss_dssp SCEEEEEE-ETTSCEEEEEEECCC
T ss_pred CEEEEEEE-eCCCCEEEEEEecCC
Confidence 89999998 789999999999875
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.89 E-value=1.3e-22 Score=202.44 Aligned_cols=242 Identities=16% Similarity=0.144 Sum_probs=143.7
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHH----HhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccc--cC
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLI----QDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--ST 359 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~----~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~ 359 (612)
.+||+.++|+|...... ..+.... ..+.+++++ +...+||||+++||++ .+|...+|+.+.+.++++. ..
T Consensus 4 ~~~i~~iSD~Hl~~~~~-~~~~~~~--~~~~l~~~i~~i~~~~~~pD~vl~~GDl~-~~g~~~~~~~~~~~l~~~~~~~~ 79 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDR-RLYGAVD--ADDRLGELLEQLNQSGLRPDAIVFTGDLA-DKGEPAAYRKLRGLVEPFAAQLG 79 (256)
T ss_dssp SEEEEEECCCCBC-----------C--HHHHHHHHHHHHHHHTCCCSEEEECSCCB-SSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEeeCccCCCCc-ccccCcC--HHHHHHHHHHHHHhcCCCCCEEEECCCCC-CCCChhHHHHHHHHhhhhhhhcC
Confidence 49999999999854321 1121111 122334333 3345899999999999 5666677777777776554 36
Q ss_pred CCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCC----CCCHHHHH
Q 007227 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW----REGTEQYR 435 (612)
Q Consensus 360 vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~----~~g~~Q~~ 435 (612)
+|+++++||||... . +...+..........+|+++.++++|++|||.... ....+|++
T Consensus 80 ~p~~~v~GNHD~~~----~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~ 141 (256)
T d2hy1a1 80 AELVWVMGNHDDRA----E--------------LRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 141 (256)
T ss_dssp CEEEECCCTTSCHH----H--------------HHHHTTCCCCCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHH
T ss_pred CCEEEEcccccchh----h--------------hhhhhccccccccccceEEEecccceeeeeeeecCCcCCcccHHHHH
Confidence 89999999999531 0 01111111112234567899999999999987543 24589999
Q ss_pred HHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceec
Q 007227 436 FIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICT 515 (612)
Q Consensus 436 WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~ 515 (612)
||++.|++. ....+||++|+|+ +............ .- ++.+..++++++|+++|+||+|...+..
T Consensus 142 wl~~~L~~~---~~~~~iv~~Hhpp-~~~~~~~~~~~~~--~~-~~~~~~i~~~~~v~~~~~GH~H~~~~~~-------- 206 (256)
T d2hy1a1 142 WLAEELATP---APDGTILALHHPP-IPSVLDMAVTVEL--RD-QAALGRVLRGTDVRAILAGHLHYSTNAT-------- 206 (256)
T ss_dssp HHHHHHTSC---CTTCEEEECSSCS-SCCSSHHHHTTSB--CC-HHHHHHHHTTSSEEEEEECSSSSCEEEE--------
T ss_pred HHHHHHHhh---hccCceeeeecCC-ccccccccccccc--cc-HHHHHHHHhccCceEEEccccchhhceE--------
Confidence 999999874 3445788889988 6543211111111 11 5788999999999999999999765432
Q ss_pred cCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEE
Q 007227 516 NKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 516 ~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~ 577 (612)
.+|..++++|+.... .++. ..+.-........||..|++ .++.+.+.++
T Consensus 207 ----------~~gi~~~~~~s~~~~-~~~~-~~~~~~~~~~~~~g~~lv~v-~~d~~~~~~i 255 (256)
T d2hy1a1 207 ----------FVGIPVSVASATCYT-QDLT-VAAGGTRGRDGAQGCNLVHV-YPDTVVHSVI 255 (256)
T ss_dssp ----------ETTEEEEECCCCC---------------------CEEEEEE-CSSCEEEEEE
T ss_pred ----------ECCEEEEEcCCcccc-cccc-CCCCCcccccCCCCEEEEEE-ECCCEEEEeC
Confidence 246667766553222 1111 01111122345678999988 5556665543
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.85 E-value=1.8e-20 Score=188.67 Aligned_cols=243 Identities=12% Similarity=0.075 Sum_probs=144.5
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCe
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (612)
++|+.++|+|...... ..+... .....++++++. .++||+|+++||+++ ++...+|+.+.+.++.+ .+|+
T Consensus 1 M~i~hiSD~Hl~~~~~-~~~~~~--~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~-~~~~~~y~~~~~~l~~l--~~p~ 74 (271)
T d3d03a1 1 MLLAHISDTHFRSRGE-KLYGFI--DVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSL--NYPL 74 (271)
T ss_dssp CEEEEECCCCBCSTTC-CBTTTB--CHHHHHHHHHHHHHTCSSCCSEEEEESCCBS-SCCHHHHHHHHHHHTTC--SSCE
T ss_pred CEEEEEecCcCCCCcc-ccccCc--CHHHHHHHHHHHHHhcCCCCCEEEECcccCc-CCcchhHHHHHHHHhcc--CCCE
Confidence 4899999999865421 111111 112233333332 357999999999994 56667777777777765 6899
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCC----CCCHHHHHHHH
Q 007227 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW----REGTEQYRFIE 438 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~----~~g~~Q~~WL~ 438 (612)
++++||||...... .+ +...+...........|.++.++++||+|||.... ....+|++||+
T Consensus 75 ~~i~GNHD~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~ 140 (271)
T d3d03a1 75 YLIPGNHDDKALFL-EY-------------LQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLE 140 (271)
T ss_dssp EEECCTTSCHHHHH-HH-------------HGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHH
T ss_pred EEEecCccchHHHH-HH-------------hhhhhhccccccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHH
Confidence 99999999742100 00 00001001111234457788899999999997543 24689999999
Q ss_pred HHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhC-CCeEEEecccccceeeecccCceeccC
Q 007227 439 HCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERICPIYQNICTNK 517 (612)
Q Consensus 439 ~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~ 517 (612)
++|++. ++ .++|+++|+|+ +............ .. .++|.++|+++ +|+++|+||+|......
T Consensus 141 ~~L~~~--~~-~~~iv~~Hh~p-~~~~~~~~d~~~~--~~-~~~l~~~l~~~~~v~~vl~GH~H~~~~~~---------- 203 (271)
T d3d03a1 141 AQLFEG--GD-KPATIFMHHPP-LPLGNAQMDPIAC--EN-GHRLLALVERFPSLTRIFCGHNHSLTMTQ---------- 203 (271)
T ss_dssp HHHHHH--TT-SCEEEEESSCS-SCCSCTTTGGGSB--TT-THHHHHHHHHCTTEEEEEECSSSSCEEEE----------
T ss_pred HHHhhh--cc-ceeEEEeccCc-cccCccccccccc--cc-hHHHHHHHHhcCCeEEEEeCCcchhhceE----------
Confidence 999984 33 34667777777 5443211111111 11 56899999998 69999999999865542
Q ss_pred CCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEE
Q 007227 518 EKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 518 ~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~ 577 (612)
.+|+.++++.+.+... .+.. ...-..+.....||..... ++..+....+
T Consensus 204 --------~~g~~~~~~pst~~~~-~~~~-~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~ 252 (271)
T d3d03a1 204 --------YRQALISTLPGTVHQV-PYCH-ADTDPYYDLSPASCLMHRQ-VGEQWVSYQH 252 (271)
T ss_dssp --------ETTEEEEECCCSSCBC-CCCS-SCCSCEEBCCCCEEEEEEE-ETTEEEEEEE
T ss_pred --------ECCEEEEEcCCceeec-ccCC-CCCCcccccCCCEEEEEEE-eCCCEEEEEE
Confidence 2466666554433322 1110 0011123334567776655 5556655444
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.83 E-value=1.2e-19 Score=182.20 Aligned_cols=248 Identities=17% Similarity=0.208 Sum_probs=147.9
Q ss_pred ceEEEEEecCCCCCCCCCCcc----cccccChHHHHHHHHHh--cCCCCEEEEcCccccCC-----CcccHHHHHHHhhh
Q 007227 286 LQQVIIFGDMGKDEADGSNEY----NNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYAN-----GYISQWDQFTAQIE 354 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~----~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~-----g~~~~wd~f~~~i~ 354 (612)
.|||++++|+|.+........ .+....+...+++++++ ..+|||||++||+++.. .....|+.+.+.++
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD 82 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 399999999998643211111 11112234455555543 36899999999999532 11223444444444
Q ss_pred ccccCCCeEEccCCCccCCCCCCCC-CCCCCCCCccccc-cccccccCCCCCCceEEEEEeCCEEEEEEcCCCC------
Q 007227 355 PIASTVPYMIASGNHERDWPGTGSF-YGNMDSGGECGVL-VENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD------ 426 (612)
Q Consensus 355 ~l~~~vP~~~~~GNHD~~~~~~~~~-y~~~dsgge~g~~-~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~------ 426 (612)
. ..+|++.++||||......... ....+........ ....+ .......+.+..++++|+.+++...
T Consensus 83 ~--~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (320)
T d2nxfa1 83 A--CSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLI----GDDIYAYEFSPAPNFRFVLLDAYDLSVIGRE 156 (320)
T ss_dssp T--TCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECG----GGTCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred H--cCCCEEEecccCccccccchhcccccccchhhhccccccccc----CCCCccceeecCCCeEEEEecCccccccccc
Confidence 3 3789999999999753210000 0000000000000 00011 1123345678899999999987521
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCC
Q 007227 427 ----------------------------------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDL 466 (612)
Q Consensus 427 ----------------------------------------~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~ 466 (612)
...+.+|++||+++|+++.+ +..++|+++|+|+ +....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~-~~~~viv~~H~p~-~~~~~ 234 (320)
T d2nxfa1 157 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPV-HPCAA 234 (320)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCC-CTTSS
T ss_pred ccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-cCCceEEEECCCC-ccCCC
Confidence 01258899999999987643 3457899999998 54432
Q ss_pred CccCCCCccchhhHHHHHHHHHhC-CCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCC
Q 007227 467 SYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFT 545 (612)
Q Consensus 467 ~~~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~ 545 (612)
.. ... .. ..+++..+|.++ +|+++|+||.|.+++.. ..+|..||++|+....
T Consensus 235 ~~--~~~--~~-~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~-----------------~~~g~~~i~~~~~~~~----- 287 (320)
T d2nxfa1 235 DP--ICL--AW-NHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-----------------DSSGAQHITLEGVIET----- 287 (320)
T ss_dssp CG--GGS--CT-THHHHHHHHHTCTTEEEEEECSCTTCEEEE-----------------CTTSCEEEECCCGGGC-----
T ss_pred CC--ccc--hh-hHHHHHHHHHhCCCeeEEEeCCcCCcCeee-----------------ccCCCEEEECCeeecC-----
Confidence 11 111 11 157899999998 59999999999877553 2357788887653211
Q ss_pred CCCCCceeeeeCCceEEEEEEecCCeEEEEEEE
Q 007227 546 TLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 546 ~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~ 578 (612)
.....+|..+++ .+.+|.++-..
T Consensus 288 ---------~~~~~~~~~~~v-~~d~~~~~~~~ 310 (320)
T d2nxfa1 288 ---------PPHSHAFATAYL-YEDRMVMKGRG 310 (320)
T ss_dssp ---------CTTSCEEEEEEE-CSSEEEEEEEE
T ss_pred ---------CCCCCCEEEEEE-ECCEEEEEEec
Confidence 123468889998 56788887654
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.79 E-value=2.3e-19 Score=156.54 Aligned_cols=99 Identities=25% Similarity=0.432 Sum_probs=78.1
Q ss_pred eccCC---CCCCcceeeecCC-CCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcce-EEeccccCCCCCccccccC
Q 007227 162 TFTNP---NAPVYPRLAQGKV-WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTL-TFGRGSMCGAPARTVGWRD 236 (612)
Q Consensus 162 ~~~~~---~~P~~~~La~~~~-~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~-t~~~~~mc~~pa~~~g~~~ 236 (612)
.|.+| ++|+|+||+++++ .++|+|+|+|... ...+.|+||.+++.....+.+.. +|. .++.+
T Consensus 9 ~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~--~~~~~V~yg~~~~~~~~~a~~~~~~~~-----------~~~~~ 75 (112)
T d2qfra1 9 VFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDE--PGSSAVRYWSEKNGRKRIAKGKMSTYR-----------FFNYS 75 (112)
T ss_dssp GGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSS--CCCCEEEEEESSSCCCEEEECEEECCB-----------CSSCB
T ss_pred cccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCC--CCCcEEEEEECCCCCCcEEEEEEEEEE-----------ecccC
Confidence 46665 7899999999986 6999999999753 46799999998776544433322 222 24456
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
.+++|+|+|+||+|||+|+||||++ .||++++|+|+|
T Consensus 76 ~~~~h~v~Lt~L~P~T~Y~YrVG~~------~~S~~~~F~T~P 112 (112)
T d2qfra1 76 SGFIHHTTIRKLKYNTKYYYEVGLR------NTTRRFSFITPP 112 (112)
T ss_dssp CCEEEEEEECSCCTTCEEEEEECCS------SSCEEEEEECCC
T ss_pred CcEEEEEEECCCCCCCEEEEEECCC------CceeeEEEEcCC
Confidence 7899999999999999999999853 489999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.76 E-value=8.3e-19 Score=154.57 Aligned_cols=97 Identities=21% Similarity=0.357 Sum_probs=76.0
Q ss_pred CCCCCCcceeeecCC-CCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCc-ceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKV-WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAG-TLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~-~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~-~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
+.++|.|+||+++++ .++|+|+|+|..+ ..+.+.|+||.+++.....+.+ +.+|+... ...+|+|+
T Consensus 21 ~~~~P~qvhl~~~~~~~tsm~VsW~T~~~-~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~-----------~~~~~~H~ 88 (119)
T d1xzwa1 21 GYNAPQQVHITQGDYEGRGVIISWTTPYD-KAGANKVFYWSENSKSQKRAMGTVVTYKYYN-----------YTSAFIHH 88 (119)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSC-CTTTTEEEEEETTCCCCEEEECEEECCEETT-----------EECCEEEE
T ss_pred CCCCCCEEEEEecCCCCCEEEEEEECCCC-CCCCCEEEEcCCCCCCccEEEEEEEEeeccc-----------ccCCeEEE
Confidence 347899999999985 7999999999654 2356899999887765544433 33444322 23679999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
|+|+||+|||+|+||||++ +||++++|+|+|
T Consensus 89 v~LtgL~P~T~Y~YrVG~~------~~S~~~~F~T~P 119 (119)
T d1xzwa1 89 CTIKDLEYDTKYYYRLGFG------DAKRQFWFVTPP 119 (119)
T ss_dssp EEECCCCTTCEEEEEECCG------GGCEEEEEECCC
T ss_pred EEECCCCCCCEEEEEECCC------CccceEEEeCCC
Confidence 9999999999999999863 489999999987
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.57 E-value=6.3e-15 Score=141.53 Aligned_cols=175 Identities=13% Similarity=0.090 Sum_probs=108.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
-+|+++||+|.+ ++.++++++. ..++|+|+++||++.......++..+.+.+..+ .+|+++
T Consensus 6 ~~i~~~sd~hg~---------------~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~--~~pv~~ 68 (228)
T d1uf3a_ 6 RYILATSNPMGD---------------LEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAY 68 (228)
T ss_dssp CEEEEEECCTTC---------------HHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEE
T ss_pred cEEEEEeCCCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccc--cceEEE
Confidence 468899999754 4455665543 258999999999995444445566666666543 689999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCC----------CCCCHHHH
Q 007227 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD----------WREGTEQY 434 (612)
Q Consensus 365 ~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~----------~~~g~~Q~ 434 (612)
++||||...... +. ..+......+.......-+.+..+++.++.++.... .....+|.
T Consensus 69 i~GNHD~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (228)
T d1uf3a_ 69 VPGPQDAPIWEY---LR---------EAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVA 136 (228)
T ss_dssp ECCTTSCSHHHH---HH---------HHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHH
T ss_pred EecCCCchhhhh---hh---------hhcccccccccccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHH
Confidence 999999631100 00 000000000000000111346677888887765321 11247889
Q ss_pred HHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccc
Q 007227 435 RFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 435 ~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
+|+++.|+.. ...+.|++.|.|+ +..... . .+.+.+..++++++++++++||+|..
T Consensus 137 ~~l~~~l~~~---~~~~~il~~H~p~-~~~~~~--~-------~~~~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 137 EYRLKALWEL---KDYPKIFLFHTMP-YHKGLN--E-------QGSHEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp HHHHGGGGGS---CSCCEEEEESSCB-CBTTTB--T-------TSBHHHHHHHHHHCCSEEEECCSSCE
T ss_pred HHHHHHHhhc---cCCceEEEEeeec-cCcccc--c-------cccHHHHHHHHhcCCcEEEEcccccc
Confidence 9999998874 3445788889988 543221 1 11346778889999999999999974
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.54 E-value=2.7e-14 Score=139.21 Aligned_cols=184 Identities=14% Similarity=0.113 Sum_probs=102.6
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHH-------------------
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD------------------- 347 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd------------------- 347 (612)
.||++++|+|... ..++.+..++++ .+||+||++||+++.......|.
T Consensus 3 ~ri~~isD~h~~~------------~~l~~l~~~~~~-~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 69 (257)
T d2yvta1 3 RKVLAIKNFKERF------------DLLPKLKGVIAE-KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEH 69 (257)
T ss_dssp CEEEEEECCTTCG------------GGHHHHHHHHHH-HCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHH
T ss_pred cEEEEEeCCCCCH------------HHHHHHHHHHhh-cCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccc
Confidence 7999999999532 234445555554 68999999999995422222221
Q ss_pred -------HHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEE
Q 007227 348 -------QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420 (612)
Q Consensus 348 -------~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~ 420 (612)
.+++.+.. ..+|+++++||||...... .. ..+......+........+.+..+++.|+.
T Consensus 70 ~d~~~~~~~~~~L~~--~~~pv~~i~GNHD~~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (257)
T d2yvta1 70 YIIETLDKFFREIGE--LGVKTFVVPGKNDAPLKIF--LR----------AAYEAETAYPNIRVLHEGFAGWRGEFEVIG 135 (257)
T ss_dssp HHHHHHHHHHHHHHT--TCSEEEEECCTTSCCHHHH--HH----------HHHHTTTTCTTEEECSSEEEEETTTEEEEE
T ss_pred cchhhHHHHHHHHHh--cCCcEEEEeCCCcchhhHH--HH----------HhccccccccccccccceeEEecCCeEEEE
Confidence 12222222 3689999999999631000 00 000000000000001112334456777777
Q ss_pred EcCCCCC-------C--CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCC
Q 007227 421 ADTEQDW-------R--EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK 491 (612)
Q Consensus 421 LDT~~~~-------~--~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~ 491 (612)
+++.... . ....+.+|++..++. .+....|++.|+|+ +.+....... .....+.+.+..++++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp-~~~~~~~~~~--~~~~~g~~~l~~~l~~~~ 209 (257)
T d2yvta1 136 FGGLLTEHEFEEDFVLKYPRWYVEYILKFVNE---LKPRRLVTIFYTPP-IGEFVDRTPE--DPKHHGSAVVNTIIKSLN 209 (257)
T ss_dssp ECSEEESSCCBSSSSCEEEHHHHHHHGGGGGG---SCCCEEEEEESSCC-SCSSTTCBTT--BSCCCSCHHHHHHHHHHC
T ss_pred eccccCCccccchhhhhhhhhHHHHHHHHhhh---cccccEEEEEcccc-cccccccccc--chhhhhhHHHHHhhhhcC
Confidence 7653211 0 123444555555554 35567899999998 6543211111 111223568899999999
Q ss_pred CeEEEecccccc
Q 007227 492 VDIAVFGHVHNY 503 (612)
Q Consensus 492 VdlvlsGH~H~Y 503 (612)
++++++||+|..
T Consensus 210 ~~~~~~GHiH~~ 221 (257)
T d2yvta1 210 PEVAIVGHVGKG 221 (257)
T ss_dssp CSEEEECSSCCE
T ss_pred CcEEEEEeecCC
Confidence 999999999974
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.04 E-value=7.9e-09 Score=97.43 Aligned_cols=178 Identities=21% Similarity=0.314 Sum_probs=104.4
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCC
Q 007227 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GN 368 (612)
++++||+|...... .....+.++++. .++|.|+|+||++. . +..+.++.+. .+++.+.||
T Consensus 6 IlviSD~H~~~~~~---------~l~~~~~~~~~~-~~vD~ii~~GDi~~---~-----~~l~~l~~l~--~~v~~V~GN 65 (193)
T d2a22a1 6 VLLIGDLKIPYGAK---------ELPSNFRELLAT-DKINYVLCTGNVCS---Q-----EYVEMLKNIT--KNVYIVSGD 65 (193)
T ss_dssp EEEECCCCTTTTCS---------SCCGGGHHHHHC-TTCCEEEECSCCCC---H-----HHHHHHHHHC--SCEEECCCT
T ss_pred EEEEeCCCCCcccc---------hhhHHHHHHhcc-CCCCEEEECCCCCC---H-----HHHHHHHhhC--CCEEEEcCC
Confidence 89999999753211 011234555553 68999999999982 1 2333444332 368899999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCCC
Q 007227 369 HERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQK 448 (612)
Q Consensus 369 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~ 448 (612)
||....... ..+. -.+| ..-.+..++
T Consensus 66 ~D~~~~~~~-------------~~~~--~~lp------~~~~~~~~~--------------------------------- 91 (193)
T d2a22a1 66 LDSAIFNPD-------------PESN--GVFP------EYVVVQIGE--------------------------------- 91 (193)
T ss_dssp TCCSCCBCC-------------GGGT--BCCC------SEEEEEETT---------------------------------
T ss_pred CCcchhhhh-------------HHHH--hhCC------ccEEEEECC---------------------------------
Confidence 997532110 0000 0112 122344443
Q ss_pred CCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCC
Q 007227 449 QPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNG 528 (612)
Q Consensus 449 ~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g 528 (612)
++|.+.|... +.. + . . .+.+..++.+.++|++++||+|...... .++
T Consensus 92 --~~i~l~H~~~-~~~--~----~---~---~~~l~~~~~~~~~dvvi~GHTH~~~~~~------------------~~g 138 (193)
T d2a22a1 92 --FKIGLMHGNQ-VLP--W----D---D---PGSLEQWQRRLDCDILVTGHTHKLRVFE------------------KNG 138 (193)
T ss_dssp --EEEEEECSTT-SSS--T----T---C---HHHHHHHHHHHTCSEEEECSSCCCEEEE------------------ETT
T ss_pred --EEEEEEeccC-CCC--C----C---C---HHHHHHHHhhcCCCEEEEcCccCceEEE------------------ECC
Confidence 3455555432 211 0 0 1 4577788888999999999999954331 146
Q ss_pred eEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCc
Q 007227 529 TIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGK 583 (612)
Q Consensus 529 ~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~ 583 (612)
+++|-.|+.|....... .+....|+.+++ ++..++++++.-.+|+
T Consensus 139 ~~~iNPGSvg~pr~~~~---------~~~~~syaild~-~~~~v~v~~y~l~~~~ 183 (193)
T d2a22a1 139 KLFLNPGTATGAFSALT---------PDAPPSFMLMAL-QGNKVVLYVYDLRDGK 183 (193)
T ss_dssp EEEEECCCSSCCCCTTS---------TTCCCEEEEEEE-ETTEEEEEEEEEETTE
T ss_pred EEEEECCCCCcCcCCCC---------CCCCCEEEEEEE-ECCEEEEEEEEecCCe
Confidence 66676788775532111 122347899998 7889999888655554
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.00 E-value=1.7e-08 Score=94.18 Aligned_cols=181 Identities=17% Similarity=0.254 Sum_probs=107.7
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+|++++||+|.+.... .....+.++++. .++|.|+|+||++. .+-.+.++.+ ..|++.+.
T Consensus 1 MkI~viSD~H~~~~~~---------~l~~~~~~~~~~-~~~D~Ii~~GDi~~--------~e~l~~l~~~--~~~v~~V~ 60 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCN---------SLPAKFKKLLVP-GKIQHILCTGNLCT--------KESYDYLKTL--AGDVHIVR 60 (182)
T ss_dssp CEEEEECCCCBTTTCS---------SCCHHHHTTCCT-TSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEECC
T ss_pred CEEEEEeecCCCCcch---------hhHHHHHHHhcc-cCCCEEEEccCccc--------hhhHHHHHhh--CCceEEEe
Confidence 4899999999754210 001233343332 57999999999982 1223334433 24788999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccC
Q 007227 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDR 446 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r 446 (612)
||||.... +|. --.++.++
T Consensus 61 GN~D~~~~------------------------~p~------~~~~~~~g------------------------------- 79 (182)
T d1z2wa1 61 GDFDENLN------------------------YPE------QKVVTVGQ------------------------------- 79 (182)
T ss_dssp CTTCCCTT------------------------SCS------EEEEEETT-------------------------------
T ss_pred CCcCcccc------------------------cce------EEEEEEcC-------------------------------
Confidence 99996420 111 01122221
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCC
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSL 526 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~ 526 (612)
++|.+.|... +... . . .+.+..++++.++|++|+||+|...-.. .
T Consensus 80 ----~~i~~~Hg~~-~~~~------~----~--~~~l~~~~~~~~~divi~GHTH~p~~~~------------------~ 124 (182)
T d1z2wa1 80 ----FKIGLIHGHQ-VIPW------G----D--MASLALLQRQFDVDILISGHTHKFEAFE------------------H 124 (182)
T ss_dssp ----EEEEEECSCC-CCBT------T----C--HHHHHHHHHHHSSSEEECCSSCCCEEEE------------------E
T ss_pred ----cEEEEEeCCC-CCCC------C----C--HHHHHHHHhccCCCEEEECCcCcceEEE------------------E
Confidence 3566667654 3211 1 1 4567777888899999999999854321 1
Q ss_pred CCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEec
Q 007227 527 NGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGK-VYDSFRISRD 593 (612)
Q Consensus 527 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~-v~D~f~i~k~ 593 (612)
+++.+|--|+.|....... .+....|+.+++ ++..+++..+.-.+++ .++++++.|+
T Consensus 125 ~~~~~iNPGSv~~pr~~~~---------~~~~~syaild~-~~~~v~~~~~~l~~~~v~~~~~~~~~~ 182 (182)
T d1z2wa1 125 ENKFYINPGSATGAYNALE---------TNIIPSFVLMDI-QASTVVTYVYQLIGDDVKVERIEYKKS 182 (182)
T ss_dssp TTEEEEECCCTTCCCCSSC---------SCCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEECC
T ss_pred CCEEEEeCCCCCCCCCCCC---------CCCCCEEEEEEE-eCCEEEEEEEEecCCcEEEEEEEEEcC
Confidence 4677777777665432111 012346889998 7788888777545554 4666777663
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.99 E-value=2.7e-08 Score=92.07 Aligned_cols=160 Identities=19% Similarity=0.254 Sum_probs=102.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~ 365 (612)
.||+++||+|.+ ...++++++. ..++|.|+|+||+.+..... ...++.++
T Consensus 4 ~kI~viSD~Hgn---------------~~al~~vl~~~~~~~D~iih~GD~~~~~~~~--------------~~~~~~~V 54 (173)
T d3ck2a1 4 QTIIVMSDSHGD---------------SLIVEEVRDRYVGKVDAVFHNGDSELRPDSP--------------LWEGIRVV 54 (173)
T ss_dssp EEEEEECCCTTC---------------HHHHHHHHHHHTTTSSEEEECSCCCSCTTCG--------------GGTTEEEC
T ss_pred CEEEEEeccCCC---------------HHHHHHHHHHhhcCCCEEEECCcccCcccch--------------hhcCCeEE
Confidence 799999999843 2345555543 35799999999998543221 11377899
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhcc
Q 007227 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~ 445 (612)
.||||.... .|. ...++.++
T Consensus 55 ~GN~D~~~~------------------------~~~------~~~~~~~~------------------------------ 74 (173)
T d3ck2a1 55 KGNMDFYAG------------------------YPE------RLVTELGS------------------------------ 74 (173)
T ss_dssp CCTTCCSTT------------------------CCS------EEEEEETT------------------------------
T ss_pred ecCcccccc------------------------cce------EEEEEECC------------------------------
Confidence 999997410 010 11233332
Q ss_pred CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCC
Q 007227 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGS 525 (612)
Q Consensus 446 r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~ 525 (612)
..|++.|... |.... . .+.+..++.+.++|++++||+|......
T Consensus 75 -----~~~~~~Hg~~-~~~~~----------~--~~~l~~~~~~~~~dvvi~GHTH~p~~~~------------------ 118 (173)
T d3ck2a1 75 -----TKIIQTHGHL-FDINF----------N--FQKLDYWAQEEEAAICLYGHLHVPSAWL------------------ 118 (173)
T ss_dssp -----EEEEEECSGG-GTTTT----------C--SHHHHHHHHHTTCSEEECCSSCCEEEEE------------------
T ss_pred -----EEEEEEeCcC-CCCCC----------C--HHHHHHHHHhcCCCEEEeCCcCcceEEE------------------
Confidence 3455666544 33210 0 2467777888999999999999854331
Q ss_pred CCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCcEE
Q 007227 526 LNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVY 585 (612)
Q Consensus 526 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~v~ 585 (612)
.+++.+|-.|+-|.+... .....|+.+++ ++..+.++|+ +-+++++
T Consensus 119 ~~~~~~iNPGSvg~pr~~------------~~~~syail~~-~~~~~~v~~~-~~d~~~~ 164 (173)
T d3ck2a1 119 EGKILFLNPGSISQPRGT------------IRECLYARVEI-DDSYFKVDFL-TRDHEVY 164 (173)
T ss_dssp ETTEEEEEECCSSSCCTT------------CCSCCEEEEEE-CSSEEEEEEE-CTTSCBC
T ss_pred ECCEEEEECCCCCCCCCC------------CCCCEEEEEEE-eCCEEEEEEE-EeCCeEe
Confidence 147788888888765321 11235888888 6789999998 6677543
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.91 E-value=3.4e-09 Score=102.34 Aligned_cols=68 Identities=12% Similarity=0.157 Sum_probs=45.0
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh-------cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-------LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~-------~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~ 359 (612)
++|+++||+|.. ...++++++. ..++|.|+++||++ +.|... .+..+.+..+...
T Consensus 1 v~I~visDiHg~---------------~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlv-d~G~~~--~evi~~l~~l~~~ 62 (251)
T d1nnwa_ 1 VYVAVLANIAGN---------------LPALTAALSRIEEMREEGYEIEKYYILGNIV-GLFPYP--KEVIEVIKDLTKK 62 (251)
T ss_dssp CEEEEEECCTTC---------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSS-SSSSCH--HHHHHHHHHHHHH
T ss_pred CEEEEEEccccC---------------HHHHHHHHHHHHHhhccCCCCcEEEEecCcC-CCCCCc--HHHHHHHHHHhhc
Confidence 479999999842 2233333332 23579999999999 444322 3455555555555
Q ss_pred CCeEEccCCCccC
Q 007227 360 VPYMIASGNHERD 372 (612)
Q Consensus 360 vP~~~~~GNHD~~ 372 (612)
.++++++||||..
T Consensus 63 ~~v~~v~GNHD~~ 75 (251)
T d1nnwa_ 63 ENVKIIRGKYDQI 75 (251)
T ss_dssp SCEEEECCHHHHH
T ss_pred CCEEEEeccHHHH
Confidence 6889999999953
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.72 E-value=7.8e-08 Score=87.88 Aligned_cols=61 Identities=21% Similarity=0.320 Sum_probs=40.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+|++++||+|.+ ...++++++. ..++|.|+++||++.. . -.+.+.. ...|++.
T Consensus 1 MkI~iiSDiHgn---------------~~al~~vl~~~~~~~~D~ii~~GD~~~~----~----~~~~l~~--~~~~~~~ 55 (165)
T d1s3la_ 1 MKIGIMSDTHDH---------------LPNIRKAIEIFNDENVETVIHCGDFVSL----F----VIKEFEN--LNANIIA 55 (165)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHHHSCCSEEEECSCCCST----H----HHHHGGG--CSSEEEE
T ss_pred CEEEEEEeCCCC---------------HHHHHHHHHHHHhcCCCEEEECCCccCH----H----HHHHHhh--cCccEEE
Confidence 589999999853 2233333332 2689999999999831 1 1222222 2468999
Q ss_pred ccCCCccC
Q 007227 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
+.||||..
T Consensus 56 v~GN~D~~ 63 (165)
T d1s3la_ 56 TYGNNDGE 63 (165)
T ss_dssp ECCTTCCC
T ss_pred Eccccccc
Confidence 99999975
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.71 E-value=5e-08 Score=97.66 Aligned_cols=83 Identities=13% Similarity=0.201 Sum_probs=51.8
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcc--cHHHHHHHhhhccc-cCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIA-STVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~--~~wd~f~~~i~~l~-~~vP 361 (612)
+||++++|+|.+....... .........++++++. ..++|+||++||++. .+.. .....+.+.++.+. ..+|
T Consensus 1 Mkilh~SDlHlG~~~~~~~--~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd-~~~~~~~~~~~~~~~~~~l~~~~i~ 77 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKP--QREEEFAEAFKNALEIAVQENVDFILIAGDLFH-SSRPSPGTLKKAIALLQIPKEHSIP 77 (333)
T ss_dssp CEEEEECCCCBTCCGGGCH--HHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBS-SSSCCHHHHHHHHHHHHHHHTTTCC
T ss_pred CEEEEEecCcCCCCCcCch--hHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCC-CCCCCHHHHHHHHHHHhhHHhcCCc
Confidence 5899999999864310000 0011123455555543 368999999999985 3322 22334455555544 4699
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (333)
T d1ii7a_ 78 VFAIEGNHDRT 88 (333)
T ss_dssp EEEECCTTTCC
T ss_pred EEEeCCCCccc
Confidence 99999999974
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.35 E-value=2e-06 Score=80.21 Aligned_cols=79 Identities=18% Similarity=0.259 Sum_probs=43.7
Q ss_pred EEEEecCCCCCCCC--CCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 289 VIIFGDMGKDEADG--SNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 289 f~v~GD~g~~~~~~--~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+.++||+|.+-..- ...+..+..-....++++.+.....|.|+++||+++..+...++.++++.+ . -..+.+.
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~~~~~~l~~L---~--g~~~lI~ 78 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKAL---P--GRKILVM 78 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHS---S--SEEEEEC
T ss_pred EEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHHHHHHHHHHC---C--CceEEEe
Confidence 55799999764310 001111111111122333223466799999999997655443344444443 2 2468899
Q ss_pred CCCccC
Q 007227 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 79 GNHD~~ 84 (188)
T d1xm7a_ 79 GNHDKD 84 (188)
T ss_dssp CTTCCC
T ss_pred cCCCch
Confidence 999975
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.04 E-value=5.8e-05 Score=68.81 Aligned_cols=69 Identities=10% Similarity=0.182 Sum_probs=42.5
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCc-----ccHHHHHHHhhhccccC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-----ISQWDQFTAQIEPIAST 359 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~-----~~~wd~f~~~i~~l~~~ 359 (612)
+|++++||+|.. ...++++++. ..++|.|+++||++..... ........+.++.+ .
T Consensus 2 Mki~iiSDiHg~---------------~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~--~ 64 (184)
T d1su1a_ 2 MKLMFASDIHGS---------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--A 64 (184)
T ss_dssp CEEEEECCCTTB---------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--G
T ss_pred cEEEEEeecCCC---------------HHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhc--C
Confidence 589999999843 2334444432 1589999999999843211 11112233333322 4
Q ss_pred CCeEEccCCCccC
Q 007227 360 VPYMIASGNHERD 372 (612)
Q Consensus 360 vP~~~~~GNHD~~ 372 (612)
.|++.+.||||..
T Consensus 65 ~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 65 HKVIAVRGNCDSE 77 (184)
T ss_dssp GGEEECCCTTCCH
T ss_pred CcEEEecCCCCch
Confidence 5899999999964
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.90 E-value=2.7e-05 Score=78.99 Aligned_cols=89 Identities=15% Similarity=0.163 Sum_probs=48.0
Q ss_pred ceEEEEEeCCEE--EEEEcCCCCC-------------CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccC
Q 007227 406 KFWYSTDYGMFR--FCIADTEQDW-------------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAV 470 (612)
Q Consensus 406 ~~yYsfd~G~v~--Fi~LDT~~~~-------------~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~ 470 (612)
+.|.-++.++++ ||.+-+.... ....+..+...+.|++. .+...+|++.|.+. ...... ..
T Consensus 128 ~py~I~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~-~~d~~~-~~ 203 (337)
T d1usha2 128 KPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGH-YDNGEH-GS 203 (337)
T ss_dssp BSEEEEEETTEEEEEEEEECTTTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCC-CGGGCC-TT
T ss_pred cceeeeecCCeEEEeecccccccccccCcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCc-cccccc-cc
Confidence 446667888865 4666443210 01123333333445432 35678999999886 322111 10
Q ss_pred CCCccchhhHHHHHHHHHhCCCeEEEecccccc
Q 007227 471 EGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 471 ~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
. .+. ...+...+...+||+++.||.|..
T Consensus 204 ~----~~~-~~~la~~~~~~~vD~IvgGHsH~~ 231 (337)
T d1usha2 204 N----APG-DVEMARALPAGSLAMIVGGHSQDP 231 (337)
T ss_dssp S----CCC-HHHHHHHSCTTSSSEEECCSSCCB
T ss_pred c----cch-hHHHHHhCcccCceEEecCccCcc
Confidence 0 011 224444444468999999999985
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.64 E-value=8.2e-05 Score=60.59 Aligned_cols=88 Identities=15% Similarity=0.165 Sum_probs=56.7
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEc----cCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWG----PKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg----~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
|.+|...++ .....++|+|+|..... ......++|. ..++.. .... . -.
T Consensus 3 p~~p~~L~~-~~~~~~si~vsW~~p~~-~~~~~~i~Y~i~~~~~~~~~--------~~~~---------------~--~t 55 (94)
T d1x5aa1 3 SLSGLSLKL-VKKEPRQLELTWAGSRP-RNPGGNLSYELHVLNQDEEW--------HQMV---------------L--EP 55 (94)
T ss_dssp CCCSCCCCE-EEEETTEEEEECCCCCS-SCCSSCCEEEEEEECSSCEE--------EEEE---------------S--SS
T ss_pred CCCCCceEE-EEcCCCEEEEEEecccC-CCCCcEEEEEEEEecCCceE--------EEee---------------c--cC
Confidence 556766666 34468999999976432 1122233443 322110 0000 0 12
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
.++|+||+|+|.|.+||......|...||+...|+|.|+
T Consensus 56 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~PP 94 (94)
T d1x5aa1 56 RVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP 94 (94)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEeCCC
Confidence 457899999999999999876677778999999999874
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=97.55 E-value=0.00019 Score=71.99 Aligned_cols=86 Identities=20% Similarity=0.218 Sum_probs=42.3
Q ss_pred ceEEEEEecCCCCCCCCCCccccccc--ChHH----HHHHHHHhcCCCC-EEEEcCccccCCCcccHHHHHHHhhhcccc
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQR--GSLN----TTRQLIQDLKNID-IVFHIGDICYANGYISQWDQFTAQIEPIAS 358 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~--~s~~----~~~~l~~~~~~pd-fvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~ 358 (612)
.++|+...|+|..-.....+ .+... +.+. .+++..++ .+++ +++.+||+............--..+-.++.
T Consensus 11 ~l~iLhtnD~Hg~l~~~~~~-~~~~~~~gg~a~~~~~~~~~~~~-~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn 88 (322)
T d3c9fa2 11 DINFVHTTDTHGWYSGHINQ-PLYHANWGDFISFTTHMRRIAHS-RNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 88 (322)
T ss_dssp SEEEEEECCCTTCTTCCSSC-GGGCCCHHHHHHHHHHHHHHHHH-TTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred EEEEEEEeccccCCCCcccc-ccccCccccHHHHHHHHHHHHHh-cCCCEEEEECCccCCCCchhhhcccCChHHHHHHh
Confidence 49999999999632210000 01100 1112 22222222 4566 666799999532211000000112233445
Q ss_pred CCCe-EEccCCCccCC
Q 007227 359 TVPY-MIASGNHERDW 373 (612)
Q Consensus 359 ~vP~-~~~~GNHD~~~ 373 (612)
.++| ..++||||+++
T Consensus 89 ~lgyDa~t~GNHEfd~ 104 (322)
T d3c9fa2 89 KQDYDLLTIGNHELYL 104 (322)
T ss_dssp TSCCSEECCCGGGSSS
T ss_pred ccCCcEEeecceeccc
Confidence 5676 77899999975
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.49 E-value=0.00012 Score=59.00 Aligned_cols=92 Identities=16% Similarity=0.207 Sum_probs=55.7
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCc-cEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAE-PFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~-~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+. ..+.++++|.|.-..... .-. -.++|...+...... ..+.. ....
T Consensus 1 P~~P~~~~v~-~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~----~~~~~-----------------~~~~ 58 (96)
T d1x5xa1 1 PSMPASPVLT-KAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFK----PKYDG-----------------EDLA 58 (96)
T ss_dssp CCCCCCCEEE-EECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCE----EEEEE-----------------SCSE
T ss_pred CccCCCCEEE-EecCCEEEEEEEeecccCcceEeeeEEEeeeccceeeeE----EeecC-----------------CCCE
Confidence 4567767663 336789999998643211 111 234443332221111 11110 1124
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
.+++||+|++.|.+||......|...||+...|+|.|
T Consensus 59 ~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 59 YTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 5689999999999999987556666789999999987
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.47 E-value=0.0002 Score=57.64 Aligned_cols=91 Identities=18% Similarity=0.242 Sum_probs=55.6
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC-C-CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN-E-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|.-+.+. ..+.++++|.|.-..... + ..-.|+|...+.... ..+. +-....
T Consensus 1 P~~P~~~~v~-~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~------~~~~-----------------~~~~~~ 56 (93)
T d1x4xa1 1 PDQCKPPQVT-CRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQ------ICYC-----------------GPGLSY 56 (93)
T ss_dssp CCCCCCCCCE-EEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCC------EEEE-----------------ESCSEE
T ss_pred CcCCCCCEEE-EeCCCeEEEEEEecccCCCeeEEEEEEEccCCCcce------Eeec-----------------CCccEE
Confidence 3455555553 235689999997543211 0 123455554433221 1111 011234
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
+|++|+|++.|.+||......|...||+...|+|+|.
T Consensus 57 ~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~Tpps 93 (93)
T d1x4xa1 57 EIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPS 93 (93)
T ss_dssp EEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEcccceeeEEEEEEEEEECCcCcCCCCcEEEEeCCC
Confidence 6899999999999999875556677899999999763
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.34 E-value=0.0028 Score=62.55 Aligned_cols=189 Identities=17% Similarity=0.088 Sum_probs=88.7
Q ss_pred eEEEEEecCCCCCCCC----CCcccccccChHHHHHHHHHhc--CCC-CEEEEcCccccCCCcccHHHHHHHhhhccccC
Q 007227 287 QQVIIFGDMGKDEADG----SNEYNNFQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~----~~~~~~~~~~s~~~~~~l~~~~--~~p-dfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~ 359 (612)
++|+..+|+|..-... ..+... .+.+..+..++++. +++ -+++.+||++.... .+.+.+-...++ ++..
T Consensus 3 l~IlhtnD~Hg~l~~~~~~~~~~~~~--~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~-~~~~~~g~~~~~-~~n~ 78 (302)
T d2z1aa2 3 LTLVHTNDTHAHLEPVELTLSGEKTP--VGGVARRVALFDRVWARAKNPLFLDAGDVFQGTL-YFNQYRGLADRY-FMHR 78 (302)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEE--ECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSH-HHHHHTTHHHHH-HHHH
T ss_pred EEEEEEcccccCcccccccccCCccc--cCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCH-hHhhhcchhHHH-HHHh
Confidence 7899999998542110 001111 12234444444431 233 47888999994322 121111111111 1222
Q ss_pred CCe-EEccCCCccCCCCCCCCCCCCCCCCcccccc--ccccccCC---CCCCceEEEEEeCCEE--EEEEcCCC------
Q 007227 360 VPY-MIASGNHERDWPGTGSFYGNMDSGGECGVLV--ENMFYVPT---ENRAKFWYSTDYGMFR--FCIADTEQ------ 425 (612)
Q Consensus 360 vP~-~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P~---~~~~~~yYsfd~G~v~--Fi~LDT~~------ 425 (612)
+.+ ..++||||+++.. .++...-.. ...|+ .+...... ...-..|.-.+.++++ ||.+-+..
T Consensus 79 ~gyDa~~~GNHEfd~G~--~~l~~~~~~--~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~~~~~ 154 (302)
T d2z1aa2 79 LRYRAMALGNHEFDLGP--GPLADFLKG--ARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISN 154 (302)
T ss_dssp TTCCEEECCGGGGTTCH--HHHHHHHTT--CCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSC
T ss_pred cccccccccchhhhcCh--hHHHHHhhh--cccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccccccc
Confidence 333 6799999998521 000000000 00000 00000000 0112346678888865 45554432
Q ss_pred ---C--CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecc
Q 007227 426 ---D--WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGH 499 (612)
Q Consensus 426 ---~--~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH 499 (612)
. +....+..++..+.|++ .+..-+|++.|... . .-..+.++ -+||+++.||
T Consensus 155 ~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~--~------------------~d~~la~~~~giD~ii~gh 211 (302)
T d2z1aa2 155 PGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGY--G------------------EDLKLARRLVGVQVIVGGH 211 (302)
T ss_dssp CCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH--H------------------HHHHHHTTCSSCCEEEECS
T ss_pred ccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCc--c------------------hhhHHHhcCCCeeeeecCc
Confidence 0 11123344555555554 45678999999764 0 11123333 2799999999
Q ss_pred cccceee
Q 007227 500 VHNYERI 506 (612)
Q Consensus 500 ~H~YeRt 506 (612)
.|..-..
T Consensus 212 ~h~~~~~ 218 (302)
T d2z1aa2 212 SHTLLGS 218 (302)
T ss_dssp SCCCBSC
T ss_pred cceeecc
Confidence 9985433
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00038 Score=55.60 Aligned_cols=88 Identities=17% Similarity=0.187 Sum_probs=56.8
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+.+. ..+.++++|+|.-..+ ....-.|+|......... .... ++......+++
T Consensus 4 aP~n~~~~-~~s~~si~l~W~~p~~-~~~~Y~i~y~~~~~~~~~----~~~~-----------------~~~~~~~~i~~ 60 (92)
T d1qg3a1 4 APQNPNAK-AAGSRKIHFNWLPPSG-KPMGYRVKYWIQGDSESE----AHLL-----------------DSKVPSVELTN 60 (92)
T ss_dssp CCEEEEEE-ECSTTCEEEEEECCSS-CCCEEEEEEEETTSCGGG----CEEE-----------------EESSSEEEECS
T ss_pred cCCCCEEE-EccCCEEEEEEEecCC-CccceEEeeeeccccccE----EEEe-----------------cCCccEEEECC
Confidence 45555553 3367899999987643 223346777654432211 1111 11234567899
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 248 LWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
|+|++.|.+||......|...||+...|+|+
T Consensus 61 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 61 LYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp CCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred CCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence 9999999999998755666678988889884
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.24 E-value=0.00032 Score=56.28 Aligned_cols=39 Identities=21% Similarity=0.308 Sum_probs=32.9
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
..++|++|+|++.|.+||......|...||+...|+|.|
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 56 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred cEEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeCC
Confidence 356799999999999999877556666789999999987
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00049 Score=56.15 Aligned_cols=91 Identities=19% Similarity=0.258 Sum_probs=53.9
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+.+ ...+.++++|+|....+..-..-.|+|...+..... ..... +. ...+|
T Consensus 11 P~~P~~~~~-~~~~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~----~~~~~----------------~~--~~~~i 67 (102)
T d1x5za1 11 PGQPLNFKA-EPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQ----RITIE----------------PG--TSYRL 67 (102)
T ss_dssp CCCCEEEEE-ECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCB----CCEEC----------------SS--SEEEE
T ss_pred CcCCCCeEE-EEccCCEEEEEEECCCCCCccceEEEEEeCCCCceE----EEEcC----------------Cc--CEEEE
Confidence 455655555 344678999999865321111224455443221110 00000 11 13468
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
+||+|++.|.+||......|...+|+...++|..
T Consensus 68 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 68 QGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp ECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred CCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence 9999999999999876545656678888898864
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=97.18 E-value=0.0007 Score=53.91 Aligned_cols=84 Identities=19% Similarity=0.268 Sum_probs=49.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+.+. ..+.++++|.|.-..+ ......|....+.. ..... .. -..++
T Consensus 4 P~~P~~l~~~-~~~~~sv~lsW~~p~~---~~~i~~Y~i~~~~~-------~~~~~---------------~~--t~~~~ 55 (88)
T d1k85a_ 4 PTAPTNLAST-AQTTSSITLSWTASTD---NVGVTGYDVYNGTA-------LATTV---------------TG--TTATI 55 (88)
T ss_dssp CCCCEEEEEE-EECSSCEEEEEECCSC---CSSEEEEEEEESSS-------EEEEE---------------SS--SEEEE
T ss_pred cCCCCCcEEE-EecCCEEEEEEeCCCC---CCCEEEEEEEccce-------EEEec---------------CC--CEEEE
Confidence 5556555442 3357899999975432 23455665321110 00000 01 13468
Q ss_pred cCCCCCCEEEEEEeeecCCC-CccccceEEEEc
Q 007227 246 RELWPNAMYTYKLGHRLFNG-TYIWSSEYQFKA 277 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g-~~~~S~~~~F~T 277 (612)
+||+||+.|.|||......| ...+|+...++|
T Consensus 56 ~~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 56 SGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp CCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred CCCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence 99999999999999775555 345677777765
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.17 E-value=0.00084 Score=55.43 Aligned_cols=93 Identities=15% Similarity=0.121 Sum_probs=56.9
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCC---ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEA---EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+ ...+.++|+|.|.-....... .-.|.|...+....... .. .......
T Consensus 11 P~~P~~l~~-~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~------~~--------------~~~~~~~ 69 (107)
T d1x5fa1 11 PSAPRDVVA-SLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVE------NT--------------SHPGEMQ 69 (107)
T ss_dssp CCCCEEEEE-EEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEE------EC--------------SSTTCSE
T ss_pred CcCCCccEE-EEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEE------EE--------------eCCCccE
Confidence 456665554 333579999999764211111 22556654333221110 00 0112356
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
.+|++|+|++.|.+||......|...+|....++|.|
T Consensus 70 ~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 70 VTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 7899999999999999987656666678888898876
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.17 E-value=0.00045 Score=56.23 Aligned_cols=88 Identities=18% Similarity=0.203 Sum_probs=53.9
Q ss_pred CcceeeecCCCCcEEEEEEeCCCCC--C-CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 170 VYPRLAQGKVWNEMTVTWTSGYGIN--E-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 170 ~~~~La~~~~~~~m~V~W~T~~~~~--~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
.-+.|......++++|+|.-..... + ..-.|+|...+...+. ..+.. -....+++
T Consensus 6 ~pp~~~~~~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~-----~~~~~-----------------~~~~~~v~ 63 (97)
T d2crza1 6 LPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPR-----EVYQG-----------------SEVECTVS 63 (97)
T ss_dssp CCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCE-----EEEEE-----------------SCSEEEEE
T ss_pred CCCEEeeeeeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCcee-----EeecC-----------------CceEEEEc
Confidence 3345533335689999998543211 1 1245566554332221 11111 11235789
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
+|+|++.|.+||......|...||+...++|.|
T Consensus 64 ~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 64 SLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP 96 (97)
T ss_dssp SCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred CCCCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence 999999999999987656666788899999876
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.16 E-value=0.0017 Score=52.48 Aligned_cols=93 Identities=13% Similarity=0.086 Sum_probs=56.6
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCC----ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEA----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
+|..+++ ...+.++|+|.|......... .-.|+|...++...... ...... +.....
T Consensus 4 ~P~~~~~-~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~-~~~~~~-----------------~~~~~~ 64 (101)
T d1x4ya1 4 GPYITFT-DAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDY-KKDMVE-----------------GDRYWH 64 (101)
T ss_dssp CCEEEEE-ECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGC-CCEEEE-----------------TTCCEE
T ss_pred CCcccEE-EEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeee-eEEEEc-----------------CCeeEE
Confidence 4555554 344689999999864321111 12466665443221111 111111 123345
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
+|.+|+|++.|.+||......|...||+...++|..
T Consensus 65 ~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 65 SISHLQPETSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp EECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 689999999999999987666777899999999853
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.15 E-value=0.0007 Score=55.00 Aligned_cols=93 Identities=17% Similarity=0.198 Sum_probs=54.6
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCCC----ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEA----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
.+|..+.+. ..+.++++|+|......... .-.|+|...+..... . .... ..+.-..
T Consensus 4 ~pP~~l~v~-~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~-~-~~~~-----------------~~~~~~~ 63 (104)
T d2b5ib2 4 MAPISLQVV-HVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEE-A-PLLT-----------------LKQKQEW 63 (104)
T ss_dssp CCCEEEEEE-EECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTT-S-CCEE-----------------ECSCCCE
T ss_pred CCCCCcEEE-EEeCCEEEEEEccccccccccceeEEEEEEeccccccee-e-eEEe-----------------cCCCcEE
Confidence 467777663 33578999999876431100 124555443322110 0 0000 0122344
Q ss_pred EEecCCCCCCEEEEEEeeecCCCC----ccccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGT----YIWSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~----~~~S~~~~F~T~p 279 (612)
+.|++|+|+|.|.+||......|. ..||+...|+|.|
T Consensus 64 ~~i~~L~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 64 ICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp EEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 678999999999999997643342 3467889999987
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.10 E-value=0.00072 Score=54.89 Aligned_cols=92 Identities=15% Similarity=0.163 Sum_probs=56.9
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
.|.+|..+++. ..+.+++.|.|........ ..-.|+|...+..... ...+. +..+.
T Consensus 3 ~P~~p~~~~~~-~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~----~~~~~-----------------~~~~~ 60 (98)
T d1x5la1 3 APSQVVVIRQE-RAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS----YSTLK-----------------AVTTR 60 (98)
T ss_dssp CCCCCCCEECS-CBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS----CEEEE-----------------ESSSE
T ss_pred CCCCCCceEEE-eccCCEEEEEEECCCCCCCCEEEEEEEeeccccccee----eEEec-----------------CCceE
Confidence 35556666652 3357999999986542110 1224666654332111 01111 12245
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
.+|+||+|++.|.+||......|...||+...|+|.
T Consensus 61 ~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 61 ATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EEECSCCTTCEEEECEEEEETTEECCCCCCEEEECC
T ss_pred EEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcC
Confidence 678999999999999987755566678999999985
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.09 E-value=0.0021 Score=52.57 Aligned_cols=39 Identities=26% Similarity=0.262 Sum_probs=32.6
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
+..+|+||+|++.|.+||......|...||+...|+|+.
T Consensus 72 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 72 LTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp SEEEECSCCSSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 456789999999999999987556666789999999965
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.97 E-value=0.00047 Score=56.27 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=32.2
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
..+|+||+|++.|.+||......|...||+...|+|.|
T Consensus 63 ~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 63 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 46789999999999999877555666788999999987
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.91 E-value=0.0016 Score=52.72 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=28.7
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKAS 278 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~-~~~S~~~~F~T~ 278 (612)
..++|.||+|++.|.+||......|. ..||+...|+||
T Consensus 65 ~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 65 TEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp SEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 35678999999999999997755565 568888888875
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.90 E-value=0.01 Score=56.04 Aligned_cols=190 Identities=16% Similarity=0.205 Sum_probs=106.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCCCc---ccHHHHHHHhhhccccCCCe
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~g~---~~~wd~f~~~i~~l~~~vP~ 362 (612)
+|++++||.=.. ++ .+.+++.+.+ .++.|||+..|.++ +.|. ....+++++. .+-
T Consensus 1 MkiLfiGDIvG~------------~G-r~~v~~~Lp~Lk~~~DfVIaNgENa-a~G~Git~k~~~~L~~~------GVD- 59 (252)
T d2z06a1 1 MRVLFIGDVMAE------------PG-LRAVGLHLPDIRDRYDLVIANGENA-ARGKGLDRRSYRLLREA------GVD- 59 (252)
T ss_dssp CEEEEECCBCHH------------HH-HHHHHHHHHHHGGGCSEEEEECTTT-TTTSSCCHHHHHHHHHH------TCC-
T ss_pred CeEEEEeccCCH------------HH-HHHHHHHhHHHHhhCCEEEEeeecc-CCCcCCCHHHHHHHHHh------CCC-
Confidence 489999998211 11 2334333332 24589999999998 6664 2333344332 233
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCC--CCCCCCHHHHHHHHHH
Q 007227 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTE--QDWREGTEQYRFIEHC 440 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~--~~~~~g~~Q~~WL~~~ 440 (612)
.++.|||=++.+..-.|.+ + .+.-+-.++|....+.-|+.|+.++.++.+++-. ....+...=.+-+++.
T Consensus 60 vIT~GNH~wdkkei~~~i~------~--~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~ 131 (252)
T d2z06a1 60 LVSLGNHAWDHKEVYALLE------S--EPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRL 131 (252)
T ss_dssp EEECCTTTTSCTTHHHHHH------H--SSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHH
T ss_pred EEEcCcccccchhhhhhhc------c--ccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHH
Confidence 3689999987543211110 0 0111123455555667788899888777777632 2222222223334444
Q ss_pred HhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCc
Q 007227 441 LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKH 520 (612)
Q Consensus 441 L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~ 520 (612)
|++ .+.+.+||=.|.=. ..| +.-.-.+.+-+|.+|+-=|+|.- ..+.++
T Consensus 132 ~~~---~~~~~i~VDfHaEa-------------TSE----K~A~g~~ldGrvsavvGTHTHV~-----TaD~rI------ 180 (252)
T d2z06a1 132 LEE---EKADYVLVEVHAEA-------------TSE----KMALAHYLDGRASAVLGTHTHVP-----TLDATR------ 180 (252)
T ss_dssp HHH---CCCSEEEEEEECSC-------------HHH----HHHHHHHHBTTBSEEEEESSCSC-----BSCCEE------
T ss_pred Hhh---cCccEEEEEcccch-------------hhh----heeeeEecCCCEEEEEecCcccc-----ccccEE------
Confidence 544 35677888888432 011 22233455778999999999982 222222
Q ss_pred cccCCCCCeEEEE-ECCCCCC
Q 007227 521 YYKGSLNGTIHIA-AGGAGAS 540 (612)
Q Consensus 521 ~y~~~~~g~vyiv-~G~gG~~ 540 (612)
-++||-|++ .|+.|..
T Consensus 181 ----Lp~GTayiTDvGM~G~~ 197 (252)
T d2z06a1 181 ----LPKGTLYQTDVGMTGTY 197 (252)
T ss_dssp ----CTTSCEEESCCCCBEES
T ss_pred ----ecCCeEEEccCccccch
Confidence 146888887 7777764
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.87 E-value=0.0012 Score=54.57 Aligned_cols=93 Identities=18% Similarity=0.229 Sum_probs=52.8
Q ss_pred CCCCCCcceeeec-CCCCcEEEEEEeCCCCCCCcc----EEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 165 NPNAPVYPRLAQG-KVWNEMTVTWTSGYGINEAEP----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~P~~~~La~~-~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
-|.+|..+.+... .+.+++.|+|....+ ...+ .|+|...++... .... + ..+.
T Consensus 10 ~P~~P~~p~~~~~~~~~~sv~l~W~~P~~--~~~~I~~Y~v~~~~~~~~~~-------~~~~---~----------~~~~ 67 (108)
T d1wf5a1 10 LPHAPEHPVATLSTVERRAINLTWTKPFD--GNSPLIRYILEMSENNAPWT-------VLLA---S----------VDPK 67 (108)
T ss_dssp CCCCCSSCEEEECSSSTTEEEEECCCCCC--CSSCEEEEEEEEECTTCCCE-------EEES---S----------CCTT
T ss_pred CCCCCCCCEEEEEeccCCEEEEEEECCCC--CCCccEEEEEEEEeccCCce-------EEee---e----------ecCC
Confidence 3567777766554 357899999987542 1222 445554333211 0000 0 0112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
....+++||+||+.|.+||......|...||+.-...|.|
T Consensus 68 ~~~~~i~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~t~P 107 (108)
T d1wf5a1 68 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLP 107 (108)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECC
T ss_pred ccEEEECCCCCCCEEEEEEEEEcCCcCCCCcCCcCCEECC
Confidence 2345789999999999999876444544455544444443
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.85 E-value=0.0026 Score=50.75 Aligned_cols=90 Identities=17% Similarity=0.155 Sum_probs=52.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+.+ ...+.++++|.|....+... ..=.|+|...++.... .... ++-....
T Consensus 1 P~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~----~~~~-----------------~~~~~~~ 58 (93)
T d2vkwa2 1 PSAPKLEGQ-MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKP----EIRL-----------------PSGSDHV 58 (93)
T ss_dssp CCCCEEEEE-ECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCC----CEEE-----------------CTTCCEE
T ss_pred CCCCccCEe-EEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceee----eeec-----------------cCCceEE
Confidence 456766554 44567899999998753211 1235677665432111 0111 1122356
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
+++||+|++.|.+||......|...-+ ...|+|.
T Consensus 59 ~i~~L~p~t~Y~~~V~A~N~~G~s~ps-~~~~~T~ 92 (93)
T d2vkwa2 59 MLKSLDWNAEYEVYVVAENQQGKSKAA-HFVFRTA 92 (93)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCE-EEEEECC
T ss_pred EEeccccceEEEEEEEEEcCCCCcCCE-eEEEEec
Confidence 789999999999999876433322222 4667774
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.83 E-value=0.0024 Score=51.89 Aligned_cols=91 Identities=15% Similarity=0.133 Sum_probs=52.3
Q ss_pred CCCCCcceeee---cCCCCcEEEEEEeCCCCC--CCcc----EEEEccCCCCCccccCcceEEeccccCCCCCccccccC
Q 007227 166 PNAPVYPRLAQ---GKVWNEMTVTWTSGYGIN--EAEP----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (612)
Q Consensus 166 ~~~P~~~~La~---~~~~~~m~V~W~T~~~~~--~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 236 (612)
|++|..+.+.. ....+.++|+|......+ .... .|+|...+...+.. ..
T Consensus 3 P~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~------~~---------------- 60 (103)
T d1f6fb2 3 PEPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEI------HF---------------- 60 (103)
T ss_dssp CCCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEE------EE----------------
T ss_pred CCCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceee------ec----------------
Confidence 56676555432 234688999998764311 1112 34444433322211 00
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcC
Q 007227 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKAS 278 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~-~~~S~~~~F~T~ 278 (612)
.+.....++.||+||+.|.+||......|. ..||+.-.+++|
T Consensus 61 ~~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~P 103 (103)
T d1f6fb2 61 TGHQTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEMP 103 (103)
T ss_dssp EETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred ccceeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeECc
Confidence 011235678999999999999998754453 457777777664
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0024 Score=51.84 Aligned_cols=91 Identities=13% Similarity=0.048 Sum_probs=53.4
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|...++ ...+.+++.|.|....+ .-..-.|+|...++.... ... ++-.....|
T Consensus 1 P~~P~~l~~-~~~t~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~~l 56 (102)
T d2cuha1 1 PDGPTQLRA-LNLTEGFAVLHWKPPQN-PVDTYDIQVTAPGAPPLQ-----AET-----------------PGSAVDYPL 56 (102)
T ss_dssp CSSCEEEEC-CCCSSSCEEEEEECCSS-CCSEEEEEEECSSSCCEE-----EEE-----------------ETTCSEEEE
T ss_pred CcCCCccEE-EEeCCCEEEEEEEeeec-cceeeEEEEEecccccee-----eee-----------------eeeeeeEEE
Confidence 456666665 34468999999987542 112346667654332110 111 112235679
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
+||+||+.|.++|......|... .....|+|.+.+
T Consensus 57 ~~L~p~t~Y~~~V~a~~~~~~s~-~~~~~~~T~~~~ 91 (102)
T d2cuha1 57 HDLVLHTNYTATVRGLRGPNLTS-PASITFTTGLEA 91 (102)
T ss_dssp CSCCSSSEEEEEEEEEETTEECC-CEEEEEESCCCC
T ss_pred ccEEeeEEEEEEEEEEeCCCCcC-CEEEEEECCCCC
Confidence 99999999999998764332222 234578887654
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.77 E-value=0.0031 Score=51.40 Aligned_cols=94 Identities=18% Similarity=0.056 Sum_probs=56.5
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCC----ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEA----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
+|..+.+ ...+.+++.|.|......... .-.|+|...+....... .. .-....+.....
T Consensus 11 pP~~v~v-~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~----~~------------~~~~~~~~~~~~ 73 (109)
T d1va9a1 11 PPMDVTL-QPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY----SI------------VEMKATGDSEVY 73 (109)
T ss_dssp CCEEEEE-EECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC----BC------------CBCCCCSSEEEE
T ss_pred CCcCcEE-EEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeecccccccee----ee------------eEEecCCCeeEE
Confidence 4555555 334689999999875321111 12566654433211100 00 001123456778
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
+|++|+|++.|.+||......|...||....|+|.
T Consensus 74 ~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 74 TLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp EEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred EECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 89999999999999998755665668887777774
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.0013 Score=53.12 Aligned_cols=87 Identities=14% Similarity=0.122 Sum_probs=42.8
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCC-----ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEA-----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~-----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
|.+|..+.+. ....++++|+|......... .-.|+|...++..... .... ...+..
T Consensus 2 P~~P~~l~v~-~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~-----~~~~-------------~~~~~~ 62 (101)
T d1iarb2 2 PRAPGNLTVH-TNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR-----IYNV-------------TYLEPS 62 (101)
T ss_dssp CCCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE-----EEEE-------------CSSCCE
T ss_pred cccCCcCEEE-EEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeee-----eeee-------------ccCccc
Confidence 5667666552 33468999999876431111 1256665544322110 0110 012234
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSS 271 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~ 271 (612)
..+.+.+|+|++.|.+||......|...||+
T Consensus 63 ~~~~i~~L~p~t~Y~~rVrA~~~~g~g~wSe 93 (101)
T d1iarb2 63 LRIAASTLKSGISYRARVRAWAQAYNTTWSE 93 (101)
T ss_dssp EEECC-----CCCEEEEEEEECGGGTCCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCCCCCCcC
Confidence 5678999999999999998764444444543
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.72 E-value=0.0017 Score=52.43 Aligned_cols=74 Identities=18% Similarity=0.235 Sum_probs=47.8
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|....|. ..+.+++.|+|........-.-.|+|...+...+... .. +.....+|
T Consensus 3 P~~P~nl~v~-~~~~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~----~~------------------~~~~~~~~ 59 (95)
T d2b5ic1 3 PWAPENLTLH-KLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFSL 59 (95)
T ss_dssp CCCCEEEEEE-EEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE----EE------------------CSSCEEEE
T ss_pred CcCCCCCEEE-EEeCCEEEEEECCCCCceeEEEEEEEEcCCCceeeEe----ee------------------cccceeEc
Confidence 6678777763 3356899999998654222345777776544332111 00 11235678
Q ss_pred cCCCCCCEEEEEEeeec
Q 007227 246 RELWPNAMYTYKLGHRL 262 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~ 262 (612)
.+|+|++.|.+||....
T Consensus 60 ~~L~p~t~Y~frVRa~~ 76 (95)
T d2b5ic1 60 PSVDGQKRYTFRVRSRF 76 (95)
T ss_dssp CSCCTTSCEEEEEEEEC
T ss_pred CCCCCCCEEEEEEEEee
Confidence 99999999999999763
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.71 E-value=0.0013 Score=53.05 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=30.5
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
.++|+||+|+|.|.+||......|...||....++|.
T Consensus 62 ~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 62 SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp EEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 4678999999999999998755666678888888774
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.0043 Score=50.49 Aligned_cols=93 Identities=14% Similarity=0.064 Sum_probs=54.0
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCc---cEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAE---PFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~---~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
+.+|..+.+....+.+.++|.|.......... -.|+|...+...... .... .+--..
T Consensus 5 ~dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~----~~~~----------------~~~~t~ 64 (105)
T d1erna2 5 LDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQ----RVEI----------------LEGRTE 64 (105)
T ss_dssp CCCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEE----EEEE----------------CTTCCE
T ss_pred cCCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCceE----EEee----------------cCCccE
Confidence 56787777777767788999998753211111 256665543322110 0000 111235
Q ss_pred EEecCCCCCCEEEEEEeeecC--CCCc---cccceEEEEcC
Q 007227 243 GFLRELWPNAMYTYKLGHRLF--NGTY---IWSSEYQFKAS 278 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~--~g~~---~~S~~~~F~T~ 278 (612)
..|.+|+|++.|.+||..... .+.+ .||+..+++||
T Consensus 65 ~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 65 CVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp EEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred EEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 678999999999999987632 2222 46667778774
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.0023 Score=52.21 Aligned_cols=90 Identities=21% Similarity=0.289 Sum_probs=55.4
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEc----cCCCCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWG----PKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg----~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
-|.+|..+.+. ..+.++++|+|.-... ...+...|- ....... ...... +--
T Consensus 10 ~P~~P~~~~~~-~~~~~sv~l~W~pp~~--~~~~i~~Y~i~~~~~~~~~~----~~~~~~-----------------~~~ 65 (105)
T d1x3da1 10 EPDIPNPPRIA-NRTKNSLTLQWKAPSD--NGSKIQNFVLEWDEGKGNGE----FCQCYM-----------------GSQ 65 (105)
T ss_dssp CCCCCCCCEEE-EEETTEEEEECCCCCC--CSSCEEEEEEEECTTTSSSC----CEEEEE-----------------ESC
T ss_pred CCcCCCCCEEE-EccCCEEEEEEECCCC--CcCccEEEEEEEecCCCcce----eEEEec-----------------CCc
Confidence 45567777763 3467899999987542 223444443 2221110 011111 112
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
....+.+|+|++.|.+||......|...||+...|+|.
T Consensus 66 ~~~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 66 KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred cEEEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence 34567899999999999997755676678988888884
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.0027 Score=51.24 Aligned_cols=90 Identities=17% Similarity=0.271 Sum_probs=53.7
Q ss_pred CCCcceeeecC-CCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 168 APVYPRLAQGK-VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 168 ~P~~~~La~~~-~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
+|.++.++... .++++.|+|.......-..-.|+|...++.... .... -++-...++|+
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~-----~~~~---------------v~~~~~~~~l~ 61 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRW-----KEAT---------------IPGHLNSYTIK 61 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCC-----EEEE---------------ECSSCCEEEEC
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeecccccee-----eeec---------------cCCCccEEEEC
Confidence 57777776544 368999999986421112246777754432110 0110 13345667999
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
||+||+.|..+|..-...|... .....|+|.
T Consensus 62 gL~P~t~Y~v~v~av~~~G~s~-~~~~~~tT~ 92 (93)
T d1owwa_ 62 GLKPGVVYEGQLISIQQYGHQE-VTRFDFTTT 92 (93)
T ss_dssp SCCSSEEEEEEEEEEESSSCEE-EEEEEEEEC
T ss_pred CcccCcEEEEEEEEEeCCCccC-cEEEEEEec
Confidence 9999999999998764333222 124667764
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.62 E-value=0.0052 Score=50.67 Aligned_cols=93 Identities=20% Similarity=0.269 Sum_probs=55.3
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC----C----ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCC
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE----A----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDP 237 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~----~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~ 237 (612)
|.+|.-+.+.. ..+++.|+|........ . .-.|+|...+...... ..... .
T Consensus 6 P~pP~nl~v~~--~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~--~~~~~-----------------~ 64 (114)
T d2gysa2 6 PPEPRDLQIST--DQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDA--AILLS-----------------N 64 (114)
T ss_dssp CCCCEEEEEEE--ETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTC--EEEEE-----------------S
T ss_pred CCcCCCeEEEE--eCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEE--EEeec-----------------c
Confidence 56777776643 45789999988643110 1 1235555543322110 00000 1
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCC------ccccceEEEEcCC
Q 007227 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGT------YIWSSEYQFKASP 279 (612)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~------~~~S~~~~F~T~p 279 (612)
.--..+.+.+|.|++.|..||......|. ..||+...|+|+|
T Consensus 65 ~~~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~p 112 (114)
T d2gysa2 65 TSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQP 112 (114)
T ss_dssp SSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC
T ss_pred CceEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcC
Confidence 12346678999999999999998743333 2577889999976
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.59 E-value=0.0031 Score=52.10 Aligned_cols=96 Identities=15% Similarity=0.152 Sum_probs=55.7
Q ss_pred CCCCCcceeeecC-CCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 166 PNAPVYPRLAQGK-VWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~P~~~~La~~~-~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+.... ..++++|.|.-..... ...-.|+|+...+..+... .... ..+-...
T Consensus 5 P~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~------~~~~------------~~~~~~~ 66 (115)
T d1bqua2 5 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQI------PPED------------TASTRSS 66 (115)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEEC------CGGG------------GCSCCSE
T ss_pred CCCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeecc------cccc------------ccccccE
Confidence 5677777665433 5789999998543211 0123455554433221110 0000 1223356
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYI---WSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~---~S~~~~F~T~p 279 (612)
+.|++|+|++.|.+||......|... ||....++|+.
T Consensus 67 ~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 67 FTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 77899999999999998765555543 55677888854
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.56 E-value=0.0055 Score=48.16 Aligned_cols=75 Identities=16% Similarity=0.259 Sum_probs=45.7
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+.+ ...+.++++|.|....+ .-..-.|+|....+.... ..... ...+-...++|+|
T Consensus 3 aP~~l~v-~~~~~~sv~v~W~~p~~-~~~~y~v~y~~~~~~~~~----~~~~~--------------~~~~~~~~~~i~~ 62 (92)
T d1tdqa2 3 APKNLRV-GSRTATSLDLEWDNSEA-EAQEYKVVYSTLAGEQYH----EVLVP--------------KGIGPTTKTTLTD 62 (92)
T ss_dssp CCEEEEE-EEECSSCEEEEEECCSS-CCSEEEEEEEETTCCCCE----EEEEE--------------CCSSSEEEEEECS
T ss_pred cCcCCEE-EEecCCEEEEEEEecCC-cccceEEEEEEcCCCcce----eeEEE--------------ecCCCeeEEEECC
Confidence 4555554 23357899999987643 223456777754432110 01100 0123456789999
Q ss_pred CCCCCEEEEEEeeec
Q 007227 248 LWPNAMYTYKLGHRL 262 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~ 262 (612)
|+|++.|.++|....
T Consensus 63 L~p~t~Y~~~V~a~~ 77 (92)
T d1tdqa2 63 LVPGTEYGVGISAVM 77 (92)
T ss_dssp CCTTCEEEEEEEEEE
T ss_pred ccCCCEEEEEEEEEe
Confidence 999999999998763
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.56 E-value=0.001 Score=54.53 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=28.6
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
..++||+||++|.+||......|...||+...|+|+
T Consensus 70 ~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v~v~Tp 105 (107)
T d2crma1 70 HLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTP 105 (107)
T ss_dssp EEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCC
T ss_pred EEEeccCCCCEEEEEEEEECCCcCcCCCCcEEEECC
Confidence 478999999999999998755555567877777774
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.55 E-value=0.0026 Score=51.76 Aligned_cols=89 Identities=16% Similarity=0.164 Sum_probs=53.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+.+ ...+.+++.|+|........ ..-.|+|...+...... ... . ....
T Consensus 11 P~~P~~l~v-~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~------~~~---------------~--~~~~ 66 (103)
T d1x5ga1 11 PGPAPNLRA-YAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQD------VDV---------------S--SHSY 66 (103)
T ss_dssp CCCCSSCEE-EEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCC------EEE---------------C--SSEE
T ss_pred cccCCCcEE-EEccCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEE------Eec---------------c--ccEE
Confidence 556766655 33357899999975432110 11235665543322110 000 0 1245
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
.|+||+|++.|.++|......|...+|+...++|.
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 67 TINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECC
T ss_pred ecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcC
Confidence 68999999999999987654565567877788875
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.51 E-value=0.0036 Score=51.00 Aligned_cols=81 Identities=15% Similarity=0.168 Sum_probs=48.1
Q ss_pred CCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEE
Q 007227 178 KVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYT 255 (612)
Q Consensus 178 ~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~ 255 (612)
.+.++++|.|.-..... ...-.|+|+...+..... ... ..++-.+..+|++|+||+.|.
T Consensus 18 ~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~-----~~~--------------~~~~~~~~~~i~~L~p~t~Y~ 78 (105)
T d2d9qb2 18 PQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWA-----LVG--------------PLPLEALQYELCGLLPATAYT 78 (105)
T ss_dssp -CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCE-----EEE--------------EECSCEEEEEECSCCSCCCEE
T ss_pred CCCCeEEEEEcCCCCCCceeEEEEEEEEecCCcccee-----eee--------------cccCCcceeEEecccCCeEEE
Confidence 35789999998653211 112346666543321110 000 012345677899999999999
Q ss_pred EEEeeecCCCCc---cccceEEEEc
Q 007227 256 YKLGHRLFNGTY---IWSSEYQFKA 277 (612)
Q Consensus 256 Yrv~~~~~~g~~---~~S~~~~F~T 277 (612)
+||......|.. .||...+++|
T Consensus 79 frVra~n~~g~G~~S~wS~~~~~~t 103 (105)
T d2d9qb2 79 LQIRCIRWPLPGHWSDWSPSLELRT 103 (105)
T ss_dssp EEEEEEECSSCCCCCCCCCCEEECC
T ss_pred EEEEEEeCCCCCCCcCCCCCEEEeC
Confidence 999876445553 4666777766
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.0037 Score=51.23 Aligned_cols=96 Identities=14% Similarity=0.073 Sum_probs=51.0
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+.+ ...+.++++|.|.-...... ..-.|+|.................. ..+.....
T Consensus 11 P~~P~~~~~-~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 74 (111)
T d1wisa1 11 PGPPTNLGI-SNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLS---------------NEPDARSM 74 (111)
T ss_dssp CCCCEEEEE-ESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEE---------------SCTTCSEE
T ss_pred CcCCCCCEE-EEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeee---------------cccceeEE
Confidence 455666655 23467899999985532111 1235566543332211100000000 11223345
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccce-EEEEc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSE-YQFKA 277 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~-~~F~T 277 (612)
.|+||+|++.|.+||......|...||+. -.|+|
T Consensus 75 ~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~~~T 109 (111)
T d1wisa1 75 EVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT 109 (111)
T ss_dssp EECSCCTTSEECCCCEEECSSCBCCCCCCCCCEEC
T ss_pred EeCCCCCCCEEEEEEEEEcCCcCCCCcCCCCCEEc
Confidence 78999999999999997744454445542 34555
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.41 E-value=0.039 Score=52.17 Aligned_cols=192 Identities=13% Similarity=0.089 Sum_probs=105.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCCCcc---cHHHHHHHhhhccccCCCe
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGYI---SQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~g~~---~~wd~f~~~i~~l~~~vP~ 362 (612)
+||+++||.=.. ++ .+.+++.+.+ .++.||||..|.++ +.|.- ...+++++. .+-+
T Consensus 1 MkILfiGDIvG~------------~G-r~~v~~~Lp~lk~~~DfVIaNgENa-a~G~Git~~~~~~l~~~------GvDv 60 (255)
T d1t70a_ 1 MRVLFIGDVFGQ------------PG-RRVLQNHLPTIRPQFDFVIVNMENS-AGGFGMHRDAARGALEA------GAGC 60 (255)
T ss_dssp CEEEEECCBBHH------------HH-HHHHHHHHHHHGGGCSEEEEECTBT-TTTSSCCHHHHHHHHHH------TCSE
T ss_pred CeEEEEecCCCH------------HH-HHHHHHHhHHHHhhCCEEEECCccC-CCCcCCCHHHHHHHHHc------CCcE
Confidence 489999998211 11 3344444333 24589999999999 65642 233333332 3333
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccccccccCC-CCCCceEEEEEeCCEEEEEEcC--CCCCCCCHHHHHHHHH
Q 007227 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPT-ENRAKFWYSTDYGMFRFCIADT--EQDWREGTEQYRFIEH 439 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~-~~~~~~yYsfd~G~v~Fi~LDT--~~~~~~g~~Q~~WL~~ 439 (612)
.+.|||=++.+..-.|.+. |. .....-.++|. ...+.-|+.|+..+.++.+++- +....+-..=.+=+++
T Consensus 61 -iT~GNH~wdkkei~~~i~~-----~~-~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~ 133 (255)
T d1t70a_ 61 -LTLGNHAWHHKDIYPMLSE-----DT-YPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDA 133 (255)
T ss_dssp -EECCTTTTSSTTHHHHHHT-----TC-SCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHH
T ss_pred -EEcCchhhcchhHHHHHhh-----cc-hhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHH
Confidence 6899999875432111110 00 00011112332 2345668888888877776663 3222222222444566
Q ss_pred HHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCC
Q 007227 440 CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEK 519 (612)
Q Consensus 440 ~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~ 519 (612)
.|++ .+.+.+||=.|.=. ..| +.-.-.+.+-+|.+|+-=|+|.- ..+.++.
T Consensus 134 ~l~~---~~~~~i~VDfHaEa-------------TSE----K~A~g~~ldGrvsav~GTHTHV~-----TaD~rIl---- 184 (255)
T d1t70a_ 134 LLER---DDLGTVFVDFHAEA-------------TSE----KEAMGWHLAGRVAAVIGTHTHVP-----TADTRIL---- 184 (255)
T ss_dssp HTTC---SSCCEEEEEEECSC-------------HHH----HHHHHHHHTTSSSEEEEESSCSC-----BSCCEEE----
T ss_pred HHhh---cCCCeEEEEccchh-------------HHH----HHHHHhhhcCcEEEEEecCcccc-----cccceEe----
Confidence 6665 35567888888432 011 12233455778999999999982 2222221
Q ss_pred ccccCCCCCeEEEE-ECCCCCC
Q 007227 520 HYYKGSLNGTIHIA-AGGAGAS 540 (612)
Q Consensus 520 ~~y~~~~~g~vyiv-~G~gG~~ 540 (612)
++||-|++ .|+-|..
T Consensus 185 ------p~GTay~TDvGMtG~~ 200 (255)
T d1t70a_ 185 ------KGGTAYQTDAGFTGPH 200 (255)
T ss_dssp ------TTTEEEESCCCCBEES
T ss_pred ------cCCcEEEecCccccch
Confidence 36888886 7777763
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.36 E-value=0.0077 Score=48.11 Aligned_cols=75 Identities=15% Similarity=0.106 Sum_probs=44.5
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|...++....+.+.++|.|.......-..-.|+|....+.... ..... .++-...++|+|
T Consensus 4 PP~~l~v~~~~~ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~----~~~~~---------------~~~~~~~~~i~~ 64 (94)
T d1fnfa1 4 PPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGN----SLEEV---------------VHADQSSCTFDN 64 (94)
T ss_dssp CCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSC----CEEEE---------------ECTTCCEEECCC
T ss_pred cCcCcEEEEecCCCEEEEEeeCCCCCCeeEEEEEEEEecccCce----EEEEE---------------eCCCccEEEECC
Confidence 56667664443456799999865331112245677754432211 01110 022345688999
Q ss_pred CCCCCEEEEEEeee
Q 007227 248 LWPNAMYTYKLGHR 261 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (612)
|+||+.|..+|...
T Consensus 65 L~p~t~Y~v~V~a~ 78 (94)
T d1fnfa1 65 LSPGLEYNVSVYTV 78 (94)
T ss_dssp CCTTSCEEEEEEEE
T ss_pred CCCCCEEEEEEEEE
Confidence 99999999999875
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.33 E-value=0.0041 Score=50.49 Aligned_cols=85 Identities=14% Similarity=0.198 Sum_probs=50.4
Q ss_pred CCCCCcceeee-cCCCCcEEEEEEeCCCCCCCc----cEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 166 PNAPVYPRLAQ-GKVWNEMTVTWTSGYGINEAE----PFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 166 ~~~P~~~~La~-~~~~~~m~V~W~T~~~~~~~~----~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
|.+|..+.+.. +...+++.|+|......+... -.|+|...+...+.. ... .+..
T Consensus 2 P~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~------~~~---------------~~~~ 60 (104)
T d1n26a3 2 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTT------WMV---------------KDLQ 60 (104)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEE------EEC---------------GGGC
T ss_pred CcCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceee------ecc---------------ccce
Confidence 56777776654 335789999999754211122 345555544332211 110 1122
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSS 271 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~ 271 (612)
....|.+|+|++.|.+||......|...||+
T Consensus 61 ~~~~i~~L~p~t~Y~~rVra~n~~g~g~wSe 91 (104)
T d1n26a3 61 HHCVIHDAWSGLRHVVQLRAQEEFGQGEWSE 91 (104)
T ss_dssp SEEEESSCCTTCCEEEEEEEEETTTBSCCCC
T ss_pred EEEEECCCCCCCEEEEEEEEEeCCCccCCcC
Confidence 3557899999999999998764445545654
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.33 E-value=0.01 Score=49.77 Aligned_cols=87 Identities=13% Similarity=0.023 Sum_probs=52.8
Q ss_pred CCCcEEEEEEeCCCCCC-CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEE
Q 007227 179 VWNEMTVTWTSGYGINE-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYK 257 (612)
Q Consensus 179 ~~~~m~V~W~T~~~~~~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yr 257 (612)
+.++++|+|.-...... ..-.|+|...+..... ..-.+.+. ..+.....+|+||+|++.|.+|
T Consensus 28 s~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~--~~~~~~~v--------------~~~~~~s~~i~~L~p~t~Y~f~ 91 (120)
T d1ujta_ 28 TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQAT--SSWQNLDA--------------KVPTERSAVLVNLKKGVTYEIK 91 (120)
T ss_dssp BTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTT--TCCEEEEC--------------CCTTCCEEEEESCCSSEEEEEE
T ss_pred CCCeEEEEecCCCCCCcEEEEEEEeeecccCCCC--cceEEEEe--------------ccCceeEEEECCCCCCCEEEEE
Confidence 57899999986532111 1236777654322110 00011110 0123445678999999999999
Q ss_pred EeeecCCCCccccceEEEEcCCCC
Q 007227 258 LGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 258 v~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
|......|...+|+...++|.+..
T Consensus 92 V~A~n~~G~G~~S~~~~~~T~e~~ 115 (120)
T d1ujta_ 92 VRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp EEEESSSCCCCCCCCEEEEECSSC
T ss_pred EEEEeCCcCcCCCCCEEEEeCCCC
Confidence 987655566667888899998753
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.31 E-value=0.002 Score=54.05 Aligned_cols=39 Identities=18% Similarity=0.309 Sum_probs=32.0
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
..+|++|+|++.|.+||......|...||+...|+|.+.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCC
Confidence 357899999999999999875556667889999998654
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.30 E-value=0.0078 Score=47.88 Aligned_cols=79 Identities=14% Similarity=0.199 Sum_probs=44.2
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCC---ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEA---EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
+|..+.+ ...+.++++|.|......... .-.|+|+..+...... ..+. ..+..+..+
T Consensus 9 ~P~~~~v-~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~---~~~~----------------~~~~~~~~~ 68 (95)
T d2ibga1 9 VPELLEI-EEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYF---KATI----------------EGAHARSFK 68 (95)
T ss_dssp CCEECCC-BCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCE---EEEE----------------ECTTCCEEE
T ss_pred CCcCeEE-EEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceee---eeec----------------cCCceeEEE
Confidence 3544444 333579999999854321111 1257777544321100 0010 012345668
Q ss_pred ecCCCCCCEEEEEEeeecCCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGT 266 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~ 266 (612)
|+||+|+|.|.+||......|.
T Consensus 69 i~~L~p~t~Y~~~V~A~n~~G~ 90 (95)
T d2ibga1 69 IAPLETATMYEFKLQSFSAASA 90 (95)
T ss_dssp ECSCCTTCEEEEEEEEECSSCB
T ss_pred EeeccCCeEEEEEEEEEeCCcc
Confidence 9999999999999987643343
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.28 E-value=0.0051 Score=50.59 Aligned_cols=81 Identities=16% Similarity=0.140 Sum_probs=46.3
Q ss_pred eccCCCCCCcceeeecCCCCcEEEEEEeCCCCC-C-CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 162 TFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGIN-E-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 162 ~~~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
.++-|.+|..+.+. ..+.++++|+|.-..+.. + ..-.|+|...+......... ... ++.
T Consensus 7 ~~~pP~~P~~~~v~-~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~-~~~-----------------~~~ 67 (108)
T d1x4za1 7 RLSPPEAPDRPTIS-TASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILAT-SAI-----------------PPS 67 (108)
T ss_dssp SCCCCCCCCCCEEE-ECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEE-EEE-----------------CTT
T ss_pred ccCCCccCCCCEEE-EccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEE-Eee-----------------cCC
Confidence 45567788888763 446789999995432211 0 12345666433321100000 000 112
Q ss_pred EEEEEecCCCCCCEEEEEEeee
Q 007227 240 IHTGFLRELWPNAMYTYKLGHR 261 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~ 261 (612)
....+++||+|++.|.+||...
T Consensus 68 ~~~~~v~~L~p~t~Y~frV~A~ 89 (108)
T d1x4za1 68 RLSVEITGLEKGISYKFRVRAL 89 (108)
T ss_dssp CCEEEEESCCTTCEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEE
Confidence 3446789999999999999876
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.25 E-value=0.0022 Score=59.65 Aligned_cols=63 Identities=17% Similarity=0.312 Sum_probs=43.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
|++++||+|.. ...++++++.. ...|-++++||++ +.|..+ .+-++.+ ...-+..
T Consensus 14 rI~vIgDIHG~---------------~~~L~~lL~~i~~~~~~d~lv~lGD~v-DrGp~s--~~vl~~l----~~~~~~~ 71 (219)
T d1g5ba_ 14 NIWVVGDLHGC---------------YTNLMNKLDTIGFDNKKDLLISVGDLV-DRGAEN--VECLELI----TFPWFRA 71 (219)
T ss_dssp CEEEECCCTTC---------------HHHHHHHHHHHTCCTTTCEEEECSCCS-SSSSCH--HHHHGGG----GSTTEEE
T ss_pred eEEEEEecccC---------------HHHHHHHHHHcCCCCCCCEEEEeCCcc-ccCccH--HHHHHHh----hcccccc
Confidence 68999999843 45567777653 3568999999999 555443 1223333 3345789
Q ss_pred ccCCCccC
Q 007227 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
+.||||..
T Consensus 72 i~GNHE~~ 79 (219)
T d1g5ba_ 72 VRGNHEQM 79 (219)
T ss_dssp CCCHHHHH
T ss_pred ccCcHHHH
Confidence 99999953
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.23 E-value=0.0031 Score=51.80 Aligned_cols=94 Identities=10% Similarity=-0.018 Sum_probs=55.8
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
.+.+|..+.+. ...++++|.|.-...... ..-.|+|...++... .+.. ..++..+.
T Consensus 7 ~~sPP~~~~~~--~t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~~-------~~~~-------------~~~~~~~~ 64 (108)
T d1v5ja_ 7 GLSPPRGLVAV--RTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWE-------VLDP-------------AVAGTETE 64 (108)
T ss_dssp CCCCCEEEEEE--ECSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCE-------EEEE-------------EECSSCCE
T ss_pred CCCcCCCeEEE--EcCCEEEEEEEecccCCCceeEEEEEeeeeeeeee-------eccc-------------cccceeee
Confidence 34456555443 346789999986432111 123667765433211 1110 00123456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
++++||+|++.|.|||..-...|...+|+...++|+..
T Consensus 65 ~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T~~~ 102 (108)
T d1v5ja_ 65 LLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEECCCC
Confidence 67999999999999998765555556777777777544
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.21 E-value=0.004 Score=52.02 Aligned_cols=41 Identities=22% Similarity=0.123 Sum_probs=33.9
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
...++|++|+|+|.|.+||......|...||....|+|++.
T Consensus 79 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 79 KTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp CSEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 34688999999999999999775566667899999999763
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.20 E-value=0.01 Score=46.54 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=45.6
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
.+|..+++. ..+.++++|.|.-... .-..-.|+|...++.... ..... ++-...++|.
T Consensus 3 d~P~~l~v~-~~s~~s~~l~W~~p~~-~~~~y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i~ 60 (90)
T d1tena_ 3 DAPSQIEVK-DVTDTTALITWFKPLA-EIDGIELTYGIKDVPGDR---TTIDL-----------------TEDENQYSIG 60 (90)
T ss_dssp CCCEEEEEE-SCCSSCEEEEEECCSS-CCSEEEEEEEETTCTTCC---EEEEE-----------------ETTCCEEEEC
T ss_pred CCCCCcEEE-EecCCEEEEEEEeCce-EeccEEEEEEEcCCCcee---EEEEe-----------------cCCcceeeEe
Confidence 457666663 4468999999986532 123347777654432110 01111 1223456899
Q ss_pred CCCCCCEEEEEEeeec
Q 007227 247 ELWPNAMYTYKLGHRL 262 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~ 262 (612)
||+||+.|.++|....
T Consensus 61 ~L~p~t~Y~~~V~a~~ 76 (90)
T d1tena_ 61 NLKPDTEYEVSLISRR 76 (90)
T ss_dssp SCCTTCEEEEEEEEEE
T ss_pred eecCCCEEEEEEEEEe
Confidence 9999999999998764
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.16 E-value=0.014 Score=47.46 Aligned_cols=90 Identities=16% Similarity=0.181 Sum_probs=45.0
Q ss_pred CCcceeeecCCCCcEEEEEEeCCCCCCCcc----EEEEccCCCC-CccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 169 PVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGGD-RTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 169 P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|..|.+ ...+.++++|.|.-..+ ...+ .|+|...+.. .+...... .... ...--...+--...
T Consensus 3 P~~p~v-~~~~~~sv~l~W~~P~~--~g~~I~~Y~ie~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~ 70 (107)
T d2ic2a1 3 PTPPNV-TRLSDESVMLRWMVPRN--DGLPIVIFKVQYRMVGKRKNWQTTNDN--IPYG-------KPKWNSELGKSFTA 70 (107)
T ss_dssp CCCCEE-EECC---EEEEEEEECC--SSCCEEEEEEEEEECC---CCEEEEEE--EECC-------SCSCSSSSEEEEEE
T ss_pred CcCCEE-EEEECCEEEEEEEeCcc--ccCCceEEEEEEEeccCCCcceEEEee--eecc-------ceeeeecccceeEE
Confidence 444444 23367899999997643 2223 3566543322 11111100 0000 00000123445677
Q ss_pred EecCCCCCCEEEEEEeeecCCCCcccc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWS 270 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S 270 (612)
+|+||+|++.|.+||......|...+|
T Consensus 71 ~i~~L~p~t~Y~frV~A~N~~G~s~~S 97 (107)
T d2ic2a1 71 SVTDLKPQHTYRFRILAVYSNNDNKES 97 (107)
T ss_dssp EECSCCSSEEEEEEEEEEETTSCEEEC
T ss_pred EECCCcCCcEEEEEEEEEcCCCCCCCC
Confidence 899999999999999987544544444
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.13 E-value=0.0045 Score=52.97 Aligned_cols=40 Identities=18% Similarity=0.008 Sum_probs=32.9
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
..++|+||+|+|.|.+||......|...||+...|+|++.
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~ 121 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCC
Confidence 4578999999999999999775556666888889999754
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.10 E-value=0.013 Score=45.67 Aligned_cols=71 Identities=14% Similarity=0.149 Sum_probs=44.1
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|...++ ...+.++++|+|....+ .-..-.|+|...+..... ... ++-....+|+|
T Consensus 2 aP~~l~v-~~~t~~sv~v~W~~p~~-~~~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~~~~~ 57 (87)
T d1qr4a1 2 NPKDLEV-SDPTETTLSLRWRRPVA-KFDRYRLTYVSPSGKKNE-----MEI-----------------PVDSTSFILRG 57 (87)
T ss_dssp CCEEEEE-ESCCSSEEEEEEECCSS-CCSEEEEEEECTTCCEEE-----EEE-----------------CTTCSEEEEES
T ss_pred cCcCcEE-EEecCCEEEEEEECCCC-CcceeEEEeecCCcceeE-----EeC-----------------CCCcCEEEECC
Confidence 4665665 34457899999987643 122346777654432110 111 11234568999
Q ss_pred CCCCCEEEEEEeeec
Q 007227 248 LWPNAMYTYKLGHRL 262 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~ 262 (612)
|+||+.|.++|....
T Consensus 58 L~p~t~Y~v~V~a~~ 72 (87)
T d1qr4a1 58 LDAGTEYTISLVAEK 72 (87)
T ss_dssp CCSSCEEEEEEEEES
T ss_pred CCcCCEEEEEEEEEc
Confidence 999999999998764
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.07 E-value=0.0072 Score=49.37 Aligned_cols=79 Identities=13% Similarity=0.038 Sum_probs=47.2
Q ss_pred cCCCCcEEEEEEeCCCCCCCc----cEEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCC
Q 007227 177 GKVWNEMTVTWTSGYGINEAE----PFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPN 251 (612)
Q Consensus 177 ~~~~~~m~V~W~T~~~~~~~~----~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pg 251 (612)
....+++.|.|..... ... -.|+|....+ ..+... .. ..+-.+..+|++|+|+
T Consensus 18 ~~~~~~i~v~W~pp~~--~~~~~~~Y~i~y~~~~~~~~w~~v----~~----------------~~~~~~~~~l~~L~p~ 75 (106)
T d1cd9b2 18 SHQPGCLWLSWKPWKP--SEYMEQECELRYQPQLKGANWTLV----FH----------------LPSSKDQFELCGLHQA 75 (106)
T ss_dssp --CCSCEEEEEECCGG--GTTSCEEEEEEEEESSTTCCCEEE----EE----------------EESCEEEEEECCCCSC
T ss_pred cCCCCEEEEEEcCccc--CCccceEEEEEEeeccccccceee----ec----------------ccCCceEEEEeccCCC
Confidence 3367899999986532 122 2677765332 222111 00 0123456679999999
Q ss_pred CEEEEEEeeecCCCCccc---cceEEEEc
Q 007227 252 AMYTYKLGHRLFNGTYIW---SSEYQFKA 277 (612)
Q Consensus 252 t~Y~Yrv~~~~~~g~~~~---S~~~~F~T 277 (612)
|.|.+||......|...| |...+|++
T Consensus 76 t~Y~frVra~~~~g~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 76 PVYTLQMRCIRSSLPGFWSPWSPGLQLRP 104 (106)
T ss_dssp SCEEEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred eEEEEEEEEEeCCCCCCCcCCCCCeEecC
Confidence 999999987755565444 45666664
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.05 E-value=0.012 Score=45.91 Aligned_cols=72 Identities=17% Similarity=0.179 Sum_probs=43.1
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|....+ ...+.++++|+|.-... .-..-.|+|...++....... ..++-....+|+|
T Consensus 3 aP~nl~v-~~~~~~s~~l~W~~p~~-~i~~Y~i~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~ 60 (89)
T d1fnha3 3 APSNLRF-LATTPNSLLVSWQPPRA-RITGYIIKYEKPGSPPREVVP--------------------RPRPGVTEATITG 60 (89)
T ss_dssp CCEEEEE-EEEETTEEEEEEECCSS-CCSEEEEEEECTTSCCEECTT--------------------CCCTTCCEEEEES
T ss_pred cCcCCEE-EEecCCEEEEEEeCCCc-CCceEEEEEeeccCCccEEEE--------------------EcCCCccEEEEEe
Confidence 4655555 23357899999986532 112346777764432211000 0012234568999
Q ss_pred CCCCCEEEEEEeee
Q 007227 248 LWPNAMYTYKLGHR 261 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (612)
|+||+.|.+||..-
T Consensus 61 L~p~t~Y~~~V~a~ 74 (89)
T d1fnha3 61 LEPGTEYTIYVIAL 74 (89)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred eeCCCEEEEEEEEE
Confidence 99999999999876
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.04 E-value=0.0086 Score=49.60 Aligned_cols=92 Identities=9% Similarity=0.051 Sum_probs=52.4
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+.+. ..+.+++.|.|.-...... ..-.|+|...+....... .... .+.....
T Consensus 21 P~~P~~~~~~-~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~--~~~~-----------------~~~~~~~ 80 (117)
T d1wfoa1 21 PGPPMGILFP-EVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTAT--VEVL-----------------APSARQY 80 (117)
T ss_dssp CCCCCCCEEE-EECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCC--EEEE-----------------CTTCCEE
T ss_pred CcCCCCcEEE-EecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEe--EEec-----------------CCceEEE
Confidence 5566655552 3357899999975432110 112466655433221100 0011 1112345
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
.++||+|++.|.+||......|...+|+...++|
T Consensus 81 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT 114 (117)
T d1wfoa1 81 TATGLKPESVYLFRITAQTRKGWGEAAEALVVTT 114 (117)
T ss_dssp EEESCCSSSEEEEEEEEECSSCEEEEEEEEEECC
T ss_pred EECCCCCCCEEEEEEEEECCCcCCCCcCCEEEEC
Confidence 6899999999999999775455555677766666
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.03 E-value=0.018 Score=45.42 Aligned_cols=87 Identities=20% Similarity=0.217 Sum_probs=49.5
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+.+ ...+.++++|+|....+ .-..-.|+|...++... .... ++.....+|+|
T Consensus 4 ~P~~l~~-~~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~-----~~~~-----------------~~~~~~~~i~~ 59 (93)
T d2cuma1 4 APRDLEA-KEVTPRTALLTWTEPPV-RPAGYLLSFHTPGGQTQ-----EILL-----------------PGGITSHQLLG 59 (93)
T ss_dssp CCEEEEE-ESCCSSCEEEEEECCSS-CCSEEEEEEECTTSCEE-----EEEE-----------------CSSCSEEEECS
T ss_pred cCCCCEE-EEeCCCEEEEEEEcccc-ccccEEEEEEccccccE-----EEEE-----------------CCCccEEEEeC
Confidence 4544444 23357999999987642 12335677765433211 0111 11233567999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 248 LWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
|+||+.|.++|..-...|.... ....|+|..
T Consensus 60 L~p~t~Y~~~V~a~~~~g~s~~-~~~~~tT~g 90 (93)
T d2cuma1 60 LFPSTSYNARLQAMWGQSLLPP-VSTSFTTGG 90 (93)
T ss_dssp CCTTCEEEEEEEEEBTTBCCCC-EEEEEECCC
T ss_pred ccCCCEEEEEEEEEeCCCCCCC-EEEEEEeCC
Confidence 9999999999987643332221 235677744
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.02 E-value=0.011 Score=46.69 Aligned_cols=74 Identities=16% Similarity=0.142 Sum_probs=43.8
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
-.+|....+. ..+.++++|.|....+ .-..-.++|....+.... ... ...+.....++
T Consensus 2 ~d~P~~l~v~-~vt~~sv~l~W~~p~~-~~~~y~i~~~~~~~~~~~-------~~~-------------~~~~~~~~~~i 59 (94)
T d1j8ka_ 2 IDRPKGLAFT-DVDVDSIKIAWESPQG-QVSRYRVTYSSPEDGIHE-------LFP-------------APDGEEDTAEL 59 (94)
T ss_dssp CCCCCCCEEE-EEETTEEEEECCCCSS-CCSCEEEEEEETTTEEEE-------ECC-------------CCCSSCCEEEE
T ss_pred CCCCCCCEEE-EecCCEEEEEEeCCCc-cccceEEEEEeecCCCce-------EEE-------------ecCCCccEEEE
Confidence 3467666552 3357899999976532 122345677654332110 000 01123345678
Q ss_pred cCCCCCCEEEEEEeee
Q 007227 246 RELWPNAMYTYKLGHR 261 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (612)
+||+||+.|.++|...
T Consensus 60 ~~L~p~t~Y~~~V~a~ 75 (94)
T d1j8ka_ 60 QGLRPGSEYTVSVVAL 75 (94)
T ss_dssp CSCCCCSEEEEEEEEC
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999875
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.99 E-value=0.015 Score=46.55 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=46.3
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccc-c--CcceEEeccccCCCCCccccccCCCeEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYS-P--AGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~-~--~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
|-+|..+++ ...+.++++|.|....+ .-..-.|+|.......... . ....... .++-...
T Consensus 4 Pp~~~~l~v-~~~t~~sv~v~W~pp~~-~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 66 (101)
T d2cuia1 4 RPRLSQLSV-TDVTTSSLRLNWEAPPG-AFDSFLLRFGVPSPSTLEPHPRPLLQRELM---------------VPGTRHS 66 (101)
T ss_dssp CCCCCCCEE-ESCCSSCEEEECCCCTT-SCSEEEEEEECCCCSSSCCCSSCCCCEEEE---------------EETTCCE
T ss_pred ccCCCCcEE-EEECCCEEEEEEEeccc-cccceEEEEEecCCCceeeccCCcceeEee---------------cccceeE
Confidence 444555555 33367899999975532 1233577777544321111 0 0001000 1223445
Q ss_pred EEecCCCCCCEEEEEEeeecCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNG 265 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g 265 (612)
..|+||+|++.|.++|.....+|
T Consensus 67 ~~v~~L~p~t~Y~~~V~a~~~~g 89 (101)
T d2cuia1 67 AVLRDLRSGTLYSLTLYGLRGPH 89 (101)
T ss_dssp EEECSCCTTCEEEEEEEEECSSS
T ss_pred EEeCCCCcCCEEEEEEEEEeCCc
Confidence 67899999999999998764333
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.96 E-value=0.0097 Score=49.42 Aligned_cols=41 Identities=12% Similarity=0.067 Sum_probs=33.0
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
.....|+||+|++.|.+||......|...||....|+|.+.
T Consensus 69 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 69 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 45677999999999999998764456667899899999753
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.92 E-value=0.0057 Score=50.93 Aligned_cols=94 Identities=16% Similarity=0.118 Sum_probs=51.0
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC-C-CccEEEEccCCCCC-ccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN-E-AEPFVEWGPKGGDR-TYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~-~-~~~~V~yg~~~~~~-~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+. ..+.++++|+|.-..... + ..-.|+|....... +... ... .-..
T Consensus 15 ~P~pP~~~~v~-~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~-----------------~~~~ 72 (117)
T d1uema_ 15 LPGPPSKPQVT-DVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTV----ANH-----------------VKTT 72 (117)
T ss_dssp SCBCCCCCEEE-EECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEE----EEE-----------------ECSS
T ss_pred cCcCCCCCEEE-EccCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEe----ccc-----------------cccc
Confidence 35677777763 335789999997443211 1 11345555433211 1100 000 0012
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEY-QFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~-~F~T~p~ 280 (612)
..+|+||+|++.|.+||......|...||+.- .++|.+.
T Consensus 73 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~v~t~~~ 112 (117)
T d1uema_ 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred cceECCCCCCCEEEEEEEEEeCCcCCCCcCCCcCEEeCCC
Confidence 35689999999999999876434444455432 3566543
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.86 E-value=0.0082 Score=48.33 Aligned_cols=81 Identities=15% Similarity=0.096 Sum_probs=42.9
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|.-+.+ ...+.++++|.|.-...... ..-.|+|............ ...... ...-...+
T Consensus 3 P~~P~~~~~-~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~-~~~~~~--------------~~~~~~~~ 66 (103)
T d1qg3a2 3 PSEPGRLAF-NVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGP-MKKVLV--------------DNPKNRML 66 (103)
T ss_dssp CCCCCCCEE-EEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSC-CEEEEE--------------CCTTCCEE
T ss_pred CccCCCcEE-EEecCCEEEEEEEECccCCCCceEEEEEeeccccccccccc-eEEEEe--------------cCCCceEE
Confidence 445655555 22357899999986533110 1124555543322111100 011000 01122457
Q ss_pred EecCCCCCCEEEEEEeeec
Q 007227 244 FLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
+++||+|++.|.+||..-.
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n 85 (103)
T d1qg3a2 67 LIENLRESQPYRYTVKARN 85 (103)
T ss_dssp EECCCCTTCCEEEEEEEEE
T ss_pred EEeecCCCCEEEEEEEEEc
Confidence 8999999999999998763
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.85 E-value=0.015 Score=46.79 Aligned_cols=87 Identities=14% Similarity=0.013 Sum_probs=47.1
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+. ..+.++++|+|.-..... -..-.++|.......+..... .......
T Consensus 3 p~pP~~p~~~-~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~~--------------------~~~~~~~ 61 (104)
T d1bpva_ 3 IDPPGKPVPL-NITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF--------------------SNILENE 61 (104)
T ss_dssp CCCCCCCEEE-EEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC--------------------SCCCSSE
T ss_pred CCCCCCCEEE-EecCCEEEEEEEeccccCcceEEEEEEEeecccccceeEEEe--------------------eccceeE
Confidence 4556666552 335689999997542211 112455565443322111100 0112244
Q ss_pred EEecCCCCCCEEEEEEeeecCCCC-ccccceE
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGT-YIWSSEY 273 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~-~~~S~~~ 273 (612)
.+++||+|+|.|.|||......|. ..+|+.-
T Consensus 62 ~~i~~L~p~t~Y~frV~A~n~~G~~s~~S~~s 93 (104)
T d1bpva_ 62 FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPS 93 (104)
T ss_dssp EEECSCCSSCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEECCCCCCCCcCCC
Confidence 578999999999999997643342 2344443
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.83 E-value=0.017 Score=45.38 Aligned_cols=73 Identities=15% Similarity=0.129 Sum_probs=43.8
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
.+|..+++ ...+.++++|.|.-..+ .-..-.|+|...++.... ... .++-.....|+
T Consensus 3 spP~~l~v-~~~~~~si~v~W~~p~~-~~~~Y~i~~~~~~~~~~~------~~~---------------~~~~~~~~~i~ 59 (90)
T d1fnha2 3 SPPRRARV-TDATETTITISWRTKTE-TITGFQVDAVPANGQTPI------QRT---------------IKPDVRSYTIT 59 (90)
T ss_dssp CCCEEEEE-EEECSSEEEEEEECCSS-CCCCEEEEEEESSSSCCE------EEE---------------CCTTCSEEEEE
T ss_pred CcCCCCEE-EEecCCEEEEEEECCCC-CCceeEEEEEEccCCceE------EEe---------------cCCCccEEEeC
Confidence 34666665 33467999999986532 122346667654332110 000 01223455789
Q ss_pred CCCCCCEEEEEEeeec
Q 007227 247 ELWPNAMYTYKLGHRL 262 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~ 262 (612)
||+||+.|.++|....
T Consensus 60 ~L~p~t~Y~~~V~a~~ 75 (90)
T d1fnha2 60 GLQPGTDYKIYLYTLN 75 (90)
T ss_dssp SCCTTCEEEEEEEEEE
T ss_pred CCCCCcEEEEEEEEEe
Confidence 9999999999998763
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.81 E-value=0.009 Score=48.83 Aligned_cols=38 Identities=11% Similarity=-0.008 Sum_probs=27.5
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCC--ccccceEEEEcC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGT--YIWSSEYQFKAS 278 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~--~~~S~~~~F~T~ 278 (612)
...+|++|+||+.|.+||.....++. ..||+...++++
T Consensus 65 ~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 65 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ceEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 35678999999999999987643322 357777666664
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.81 E-value=0.018 Score=45.14 Aligned_cols=73 Identities=19% Similarity=0.281 Sum_probs=43.2
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|...++ ...+.++++|.|....+.....-.|+|...++.... ..... ++-...++|+|
T Consensus 3 pP~~l~~-~~~~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~ 61 (91)
T d1fnfa2 3 PPTDLRF-TNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDV---AELSI-----------------SPSDNAVVLTN 61 (91)
T ss_dssp CCEEEEE-ESCCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCC---EEEEE-----------------CTTCCEEEECS
T ss_pred cCCceEE-EEeCCCEEEEEEEecCCCCcceeEEEEEECCCCccE---EEEEe-----------------CCCceEEEEec
Confidence 3554554 233689999999875431112236777754432210 00111 12234578999
Q ss_pred CCCCCEEEEEEeee
Q 007227 248 LWPNAMYTYKLGHR 261 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (612)
|+|++.|.++|..-
T Consensus 62 L~p~t~Y~~~V~a~ 75 (91)
T d1fnfa2 62 LLPGTEYVVSVSSV 75 (91)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred eeCCCEEEEEEEEE
Confidence 99999999999865
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.78 E-value=0.014 Score=45.70 Aligned_cols=72 Identities=11% Similarity=0.055 Sum_probs=42.6
Q ss_pred CCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCC
Q 007227 169 PVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLREL 248 (612)
Q Consensus 169 P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL 248 (612)
|..+.+ ...+.++++|.|..... ....-.++|......... ..... +.-.-..+|+||
T Consensus 3 P~~l~~-~~v~~~si~l~W~~p~~-~~~~~~i~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~L 60 (90)
T d1fnha1 3 PTDLKF-TQVTPTSLSAQWTPPNV-QLTGYRVRVTPKEKTGPM---KEINL-----------------APDSSSVVVSGL 60 (90)
T ss_dssp CEEEEE-EEECSSCEEEEEECCSS-CCSEEEEEEEESSSCSCC---CEEEE-----------------CTTCCEEEECSC
T ss_pred CCCEEE-EEecCCEEEEEEEccce-eccceEEEEEeeeCCCce---EEEEe-----------------CCCCeEEEEecc
Confidence 444444 23368999999987643 223456777654332111 00110 111234689999
Q ss_pred CCCCEEEEEEeeec
Q 007227 249 WPNAMYTYKLGHRL 262 (612)
Q Consensus 249 ~Pgt~Y~Yrv~~~~ 262 (612)
+||+.|.+||....
T Consensus 61 ~p~t~Y~~~V~a~n 74 (90)
T d1fnha1 61 MVATKYEVSVYALK 74 (90)
T ss_dssp CTTCEEEEEEEEEE
T ss_pred cCceEEEEEEEEEe
Confidence 99999999998764
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.74 E-value=0.009 Score=46.67 Aligned_cols=71 Identities=17% Similarity=0.202 Sum_probs=43.6
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+.+. ..+.++++|.|....+ .-..-.|+|...++.... .... +-.-.++|+|
T Consensus 3 ~P~nl~v~-~~~~~s~~l~W~~p~~-~~~~Y~v~~~~~~~~~~~-----~~~~-----------------~~~~~~~~~~ 58 (86)
T d1tdqa3 3 SPRDLMVT-ASSETSISLIWTKASG-PIDHYRITFTPSSGISSE-----VTVP-----------------RDRTSYTLTD 58 (86)
T ss_dssp CCEEEEEE-EECSSCEEEEEECCCS-CCSEEEEEEECSSSCCEE-----EEEE-----------------SSCSEEEECC
T ss_pred cCCCCEEE-EecCCEEEEEEeCCCC-CccceEEEEecccccceE-----EEeC-----------------CCccEEEECC
Confidence 45555553 2357899999987643 222347777754432211 1111 1123568999
Q ss_pred CCCCCEEEEEEeeec
Q 007227 248 LWPNAMYTYKLGHRL 262 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~ 262 (612)
|+||+.|.++|....
T Consensus 59 L~p~t~Y~v~V~a~~ 73 (86)
T d1tdqa3 59 LEPGAEYIISITAER 73 (86)
T ss_dssp CCTTCCEEEEEEEEE
T ss_pred CccccEEEEEEEEEc
Confidence 999999999998763
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.70 E-value=0.013 Score=47.00 Aligned_cols=76 Identities=14% Similarity=0.110 Sum_probs=43.9
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--C-CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--E-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+. ..+.++++|.|.-..... + ..-.|+|...++..+..... .+.....
T Consensus 2 P~~P~~~~v~-~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~--------------------~~~~~~~ 60 (98)
T d1x5ya1 2 TSAPQHLTVE-DVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK--------------------EPVERCG 60 (98)
T ss_dssp CCCCEEEEEE-EECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS--------------------SCBSSSE
T ss_pred CCCCcCcEEE-EccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEeee--------------------ecCceeE
Confidence 4566666553 335789999998542211 1 12456676655433321110 0111124
Q ss_pred EEecCCCCCCEEEEEEeeec
Q 007227 243 GFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
.+++||+||+.|.+||....
T Consensus 61 ~~v~~L~~~~~Y~frV~A~n 80 (98)
T d1x5ya1 61 FTVKDLPTGARILFRVVGVN 80 (98)
T ss_dssp EEEECCCTTCCEEEEEEEEE
T ss_pred EEECCCcCCeEEEEEEEEEC
Confidence 57899999999999998763
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.68 E-value=0.017 Score=45.27 Aligned_cols=71 Identities=21% Similarity=0.203 Sum_probs=43.1
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|....+ ...+.++++|+|....+ .-..-.|+|...+..... ..++. +-...++++|
T Consensus 3 ~P~~l~v-~~v~~~s~~l~W~~~~~-~~~~Y~i~~~~~~~~~~~----~~~~~-----------------~~~~~~~i~~ 59 (88)
T d1qr4a2 3 SPKGISF-SDITENSATVSWTPPRS-RVDSYRVSYVPITGGTPN----VVTVD-----------------GSKTRTKLVK 59 (88)
T ss_dssp CCSCEEE-ESCCSSCEEEEECCCSS-CCSEEEEEEEETTCCCCE----EEEEE-----------------TTCCEEEECS
T ss_pred CCcceEE-EEecCCEEEEEEEcccE-eeceEEEEEEeccCCceE----EEEec-----------------CCccEEEECC
Confidence 3555544 23358999999976532 223346777754432211 11111 1224578999
Q ss_pred CCCCCEEEEEEeee
Q 007227 248 LWPNAMYTYKLGHR 261 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (612)
|+||+.|.++|..-
T Consensus 60 L~p~t~Y~~~V~a~ 73 (88)
T d1qr4a2 60 LVPGVDYNVNIISV 73 (88)
T ss_dssp CCSSCEEEEEEEEE
T ss_pred CCCCCEEEEEEEEE
Confidence 99999999999876
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=95.61 E-value=0.1 Score=49.78 Aligned_cols=191 Identities=16% Similarity=0.095 Sum_probs=102.9
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccCh---HHHHHHHHHhcCCCCEEEEcCccccCCCcc---cHHHHHHHhhhccccC
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGS---LNTTRQLIQDLKNIDIVFHIGDICYANGYI---SQWDQFTAQIEPIAST 359 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s---~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~---~~wd~f~~~i~~l~~~ 359 (612)
.+|++++||.=.. ++. .+.+.++.++ .++||||..|-++ +.|.- ...+++++. .
T Consensus 4 ~MkILfiGDIvG~------------~GR~~v~~~Lp~Lr~~-~~iDfVIaNgENa-a~G~Git~k~~~eL~~~------G 63 (281)
T d1t71a_ 4 SIKFIFLGDVYGK------------AGRNIIKNNLAQLKSK-YQADLVIVNAENT-THGKGLSLKHYEFLKEA------G 63 (281)
T ss_dssp CCEEEEECEEBHH------------HHHHHHHTTHHHHHHH-HTCSEEEEECTBT-TTTSSCCHHHHHHHHHH------T
T ss_pred cceEEEEEccCCH------------HHHHHHHHHhHHHHHH-hCCCEEEECCccC-CCCcCCCHHHHHHHHHh------C
Confidence 4899999998211 111 1223444443 5899999999999 55542 223333322 3
Q ss_pred CCeEEccCCCccCCCCCCCCCCCCCCCCcccccccccccc----CCCCCCceEEEEEeCCEEEEEEcCCC--CCCC--CH
Q 007227 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYV----PTENRAKFWYSTDYGMFRFCIADTEQ--DWRE--GT 431 (612)
Q Consensus 360 vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~----P~~~~~~~yYsfd~G~v~Fi~LDT~~--~~~~--g~ 431 (612)
+- .++.|||=++....-.+.... .. .-+-.++ |....++-|..++.++..+.+++-.- ...+ -.
T Consensus 64 vD-vIT~GNH~wd~kei~~~i~~~---~~----llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~ 135 (281)
T d1t71a_ 64 VN-YITMGNHTWFQKLDLAVVINK---KD----LVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTT 135 (281)
T ss_dssp CC-EEECCTTTTCCGGGHHHHTTC---TT----EECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBC
T ss_pred Cc-EEEcCchhhhchhhHHHHhhc---cc----ccccccccccccCCCCCceEEEEEccccceeeeeecccccccccccc
Confidence 33 368999987643221111100 00 0001122 22334566888888876666666421 1111 12
Q ss_pred HHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccC
Q 007227 432 EQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511 (612)
Q Consensus 432 ~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~ 511 (612)
....-+++.+.. .+++.+||=.|.=. ..|. .+ .-.+.+-+|.+|+-=|+|. |..+
T Consensus 136 ~pf~~~~~~~~~---~~~d~i~VDfHaEA-------------TSEK---~A-~g~~lDGrvsaVvGTHTHV-----~TaD 190 (281)
T d1t71a_ 136 NPFKVLKELILK---RDCDLHIVDFHAET-------------TSEK---NA-FCMAFDGYVTTIFGTHTHV-----PSAD 190 (281)
T ss_dssp CHHHHHHHHHTT---CCCSEEEEEEECSC-------------HHHH---HH-HHHHHTTTSSEEEEESSSS-----CCTT
T ss_pred HHHHHHHHhhcc---cCCCeEEEEeccch-------------hhhh---hh-heeeeCCcEEEEEecCccc-----ccCc
Confidence 223334444443 46778888888432 0111 12 2344577899999999998 2222
Q ss_pred ceeccCCCccccCCCCCeEEEE-ECCCCC
Q 007227 512 NICTNKEKHYYKGSLNGTIHIA-AGGAGA 539 (612)
Q Consensus 512 ~~~~~~~~~~y~~~~~g~vyiv-~G~gG~ 539 (612)
.++. ++||-|++ .|+-|.
T Consensus 191 ~rIL----------p~GTAyiTDvGMtG~ 209 (281)
T d1t71a_ 191 LRIT----------PKGSAYITDVGMCGP 209 (281)
T ss_dssp CEEC----------TTSCEEESCCCEEBC
T ss_pred cccc----------cCCeEEEecCccccC
Confidence 2222 36888886 677665
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.60 E-value=0.017 Score=45.62 Aligned_cols=74 Identities=16% Similarity=0.177 Sum_probs=44.4
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
.+|..+.+.. .+.++++|.|.-... ....-.|+|...++.... ..+. .++....++++
T Consensus 5 ~~P~~l~v~~-v~~~si~v~W~~p~~-~~~~y~i~~~~~~~~~~~-----~~~~---------------~~~~~~~~~i~ 62 (93)
T d1tdqa1 5 DGPTQILVRD-VSDTVAFVEWTPPRA-KVDFILLKYGLVGGEGGK-----TTFR---------------LQPPLSQYSVQ 62 (93)
T ss_dssp CCCEEEEEEE-ECSSCEEEEEECCSS-CCSEEEEEEEESSSSCCC-----EEEE---------------ECTTCSEEEEC
T ss_pred CcCCCCEEEE-eCCCEEEEEEEcccc-CCCceEEEEEeccCccee-----eEEE---------------eCCCceEEEEe
Confidence 3566666533 356899999986532 223346777655432110 1111 11223456899
Q ss_pred CCCCCCEEEEEEeeec
Q 007227 247 ELWPNAMYTYKLGHRL 262 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~ 262 (612)
||+||++|..+|..-.
T Consensus 63 ~L~p~t~Y~v~V~a~~ 78 (93)
T d1tdqa1 63 ALRPGSRYEVSISAVR 78 (93)
T ss_dssp SCCTTCEEEEEEEEEE
T ss_pred CcccceEEEEEEEEEe
Confidence 9999999999998763
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.58 E-value=0.019 Score=45.36 Aligned_cols=73 Identities=8% Similarity=-0.103 Sum_probs=42.0
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+.+ ...+.++++|.|....+..-..-.|+|...++.... .... .++-....+|+|
T Consensus 8 ~P~~l~v-~~~t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~-----~~~~---------------~~~~~t~~~i~~ 66 (95)
T d2fnba_ 8 QLTDLSF-VDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPI-----FEDF---------------VDSSVGYYTVTG 66 (95)
T ss_dssp CCTTCEE-ECCCSSCEEEECCCCCCSSCCEEEEEEEEETSCCEE-----EEEE---------------CCSSCSEEEECC
T ss_pred cCCCeEE-EEEcCCEEEEEEEecCCceEEeEEEEEEEeeccceE-----EEEE---------------eCCCCeEEEEec
Confidence 4555554 334679999999765321112235666654332110 0000 012234567999
Q ss_pred CCCCCEEEEEEeee
Q 007227 248 LWPNAMYTYKLGHR 261 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (612)
|+||+.|.++|...
T Consensus 67 L~p~t~Y~~~V~a~ 80 (95)
T d2fnba_ 67 LEPGIDYDISVITL 80 (95)
T ss_dssp CCTTSEEEEEEEEE
T ss_pred ccCCEEEEEEEEEE
Confidence 99999999999876
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.35 E-value=0.047 Score=45.35 Aligned_cols=110 Identities=10% Similarity=0.077 Sum_probs=58.5
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
.|.+|..+.+.. ..+++.|+|.-..... -..-.|+|...+......... ..+.+ .|..+.... ...+..-.
T Consensus 7 ~P~aP~~v~v~~--~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~-~~~~~--~~~~~~~~~--~~~~~~~~ 79 (123)
T d1wfta_ 7 GPGAPSTVRISK--NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQ-LVFMR--IYCGLKTSC--TVTAGQLA 79 (123)
T ss_dssp CCCCCEEEEEEE--CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCC-CEEEE--EEEESCSEE--EEEHHHHT
T ss_pred CCcCCcccEEEe--CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccce-eeeEE--EecCCceeE--eecCCccE
Confidence 456676666643 4688999998543211 123466776544432211111 01110 000000000 00011112
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
..+.+|+|++.|.+||......|...+|+...|+|....
T Consensus 80 ~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~ 118 (123)
T d1wfta_ 80 NAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKS 118 (123)
T ss_dssp TCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCS
T ss_pred EEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCC
Confidence 357899999999999998755565667888889886543
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.33 E-value=0.022 Score=47.54 Aligned_cols=98 Identities=17% Similarity=0.171 Sum_probs=54.2
Q ss_pred ccCCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 163 FTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 163 ~~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
+.-|.+|..+.+. ..+.++++|.|.-...... ..-.++|........... .... ....
T Consensus 14 ~d~P~~P~~~~v~-~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~-----------------~~~~ 73 (127)
T d1ueya_ 14 YDVPNPPFDLELT-DQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH--HQTE-----------------VSGT 73 (127)
T ss_dssp CCSCCCCEEEEEE-CCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEE--EEEE-----------------EESS
T ss_pred cccCcCCCCcEEE-EecCCeEEEEEeCCcccccceEeeeeeeccccccceeEE--EEee-----------------cCCc
Confidence 4566777776663 3357899999986543111 122444443322211100 0000 0112
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSE-YQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~-~~F~T~p~ 280 (612)
+...+.+|+|++.|.+||......|...||.. ..|+|.+.
T Consensus 74 ~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 74 QTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CCEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred eEEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 34567899999999999987754555556643 44666654
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.26 E-value=0.031 Score=45.23 Aligned_cols=92 Identities=13% Similarity=0.111 Sum_probs=51.0
Q ss_pred ccCCCCCCcceeee-cCCCCcEEEEEEeCCCCCC-C----ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccC
Q 007227 163 FTNPNAPVYPRLAQ-GKVWNEMTVTWTSGYGINE-A----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (612)
Q Consensus 163 ~~~~~~P~~~~La~-~~~~~~m~V~W~T~~~~~~-~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 236 (612)
+.-|.+|..+.+.. ....++++|+|........ . .-.++|...+...+.. ...
T Consensus 5 iVkP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~-----~~~---------------- 63 (109)
T d1uc6a_ 5 SVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQH-----VEL---------------- 63 (109)
T ss_dssp SCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCC-----EEE----------------
T ss_pred CEECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEE-----ecc----------------
Confidence 34567787777654 3457899999987642111 1 1234444333222110 000
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEc
Q 007227 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKA 277 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~---~~S~~~~F~T 277 (612)
+-.....|.+|+|++.|.+||.... ++.. .||+...++|
T Consensus 64 -~~~~~~~i~~L~~~t~Y~~rVrA~~-~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 64 -SNGTAHTITDAYAGKEYIIQVAAKD-NEIGTWSDWSVAAHATP 105 (109)
T ss_dssp -SSCSEEEETTCCSSSCEEEEEECCB-SSSCCCCCCCEEEEECC
T ss_pred -CCceeEEeCCCCCCCEEEEEEEEEE-CCCCCcCCCCCCEEeEC
Confidence 1123456899999999999998643 2222 3555555543
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.21 E-value=0.042 Score=42.73 Aligned_cols=72 Identities=15% Similarity=0.100 Sum_probs=43.7
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|....+. ..+.++++|.|....+ ....-.|+|...+..... ..... ++-...+.|++
T Consensus 3 ~P~~l~v~-~vt~~sv~l~W~~p~~-~~~~Y~i~~~~~~~~~~~---~~~~v-----------------~~~~~~~~i~~ 60 (89)
T d1fnfa3 3 SPTGIDFS-DITANSFTVHWIAPRA-TITGYRIRHHPEHFSGRP---REDRV-----------------PHSRNSITLTN 60 (89)
T ss_dssp CCEEEEEE-SCCSSEEEEEEECCSS-CCSEEEEEEECSCCSSCC---EEEEE-----------------ETTCCEEEEES
T ss_pred cCcCCEEE-EecCCEEEEEEEeCCC-EEeeEEEEEEECCCCCce---EEEEE-----------------CCCccEEEECC
Confidence 46555542 3358999999987542 112335777765432211 01111 12234568999
Q ss_pred CCCCCEEEEEEeee
Q 007227 248 LWPNAMYTYKLGHR 261 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (612)
|+|++.|.++|..-
T Consensus 61 L~p~t~Y~~~V~a~ 74 (89)
T d1fnfa3 61 LTPGTEYVVSIVAL 74 (89)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred CcccCEEEEEEEEE
Confidence 99999999999876
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=94.99 E-value=0.014 Score=46.74 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=42.2
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+.+.. ..++++|+|.-+..... ..-.|+|............. .... -....
T Consensus 6 P~~P~~~~v~~--~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~------------------~~~~~ 64 (100)
T d1cfba1 6 PNAPKLTGITC--QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY-EKVP------------------NTDSS 64 (100)
T ss_dssp CCCCEEEEEEE--CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE-EEEE------------------TTCSE
T ss_pred CCcCcCcEEEE--cCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEe-eecC------------------CceEE
Confidence 56676666543 45789999986543111 12356666543322111100 0000 01234
Q ss_pred EecCCCCCCEEEEEEeeec
Q 007227 244 FLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
.+++|+|++.|.+||....
T Consensus 65 ~~~~L~p~t~Y~frV~A~n 83 (100)
T d1cfba1 65 FVVQMSPWANYTFRVIAFN 83 (100)
T ss_dssp EEEECCSSEEEEEEEEEEE
T ss_pred EEecCCCCCEEEEEEEEEe
Confidence 6789999999999998763
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.89 E-value=0.034 Score=45.52 Aligned_cols=90 Identities=17% Similarity=0.082 Sum_probs=49.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|.-.++..+ .+++.|.|.-...... ..-.|+|+..+.... .... .+-....
T Consensus 21 P~~P~~~~~~~~--~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~~-----~~~~-----------------~~~~~~~ 76 (113)
T d1x5ia1 21 PEVPSSLHVRPL--VTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQ-----TIKV-----------------DYKQRYY 76 (113)
T ss_dssp CCSCSEEEEEEE--TTEEEEEEECCSCTTBCCCEEEEEECSSCGGGE-----EEEC-----------------CTTCCEE
T ss_pred CCCCEeeeeeeC--CCEEEEEEEccccCCccEEEEEEEeeeccccce-----eeee-----------------eCCccEE
Confidence 456666665433 4789999985432110 112556654332111 0110 1223456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
+|.+|+|++.|.+||......|.... -.-.++|.|.
T Consensus 77 ~i~~L~p~t~Y~~~V~A~n~~G~g~~-~~~~~~T~P~ 112 (113)
T d1x5ia1 77 TIENLDPSSHYVITLKAFNNVGEGIP-LYESAVTRPH 112 (113)
T ss_dssp EECSCCSSCEECCEEEEECSSCBCCC-CCCCEECCCC
T ss_pred EEeccccCcEEEEEEEEECCCcCCCC-eeeEEEeCCC
Confidence 79999999999999987643332221 1245777663
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.81 E-value=0.042 Score=42.95 Aligned_cols=66 Identities=20% Similarity=0.271 Sum_probs=40.1
Q ss_pred CCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEE
Q 007227 179 VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKL 258 (612)
Q Consensus 179 ~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv 258 (612)
+.++++|.|....+ ....-.|+|...++.... ..... ++-...+.|+||+||+.|.++|
T Consensus 9 t~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~t~~~l~~L~p~t~Y~~~V 67 (91)
T d1fnaa_ 9 TPTSLLISWDAPAV-TVRYYRITYGETGGNSPV---QEFTV-----------------PGSKSTATISGLKPGVDYTITV 67 (91)
T ss_dssp CSSCEEEECCCCSS-CCSEEEEEEEETTCCSCC---EEEEE-----------------ETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCEEEEEEEccce-EecEEEEEEEcCCCCcee---EEEEe-----------------CCCccEEEeCCCCCCCEEEEEE
Confidence 57899999976532 223346777765432211 00111 1122357899999999999999
Q ss_pred eeecCCC
Q 007227 259 GHRLFNG 265 (612)
Q Consensus 259 ~~~~~~g 265 (612)
..-...|
T Consensus 68 ~a~~~~g 74 (91)
T d1fnaa_ 68 YAVTGRG 74 (91)
T ss_dssp EEECTTC
T ss_pred EEEeCCc
Confidence 8764333
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.80 E-value=0.033 Score=44.89 Aligned_cols=84 Identities=15% Similarity=0.088 Sum_probs=46.0
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+.+ ...+.+++.|.|......+. ..-.|+|...+.... ...... ++-....
T Consensus 11 P~~p~~l~~-~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~---~~~~~~-----------------~~~~~~~ 69 (106)
T d1wfna1 11 PGPVGHLSF-SEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT---RVTHYL-----------------PNVTLEY 69 (106)
T ss_dssp CCCCSCCEE-ESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGG---CCCEEE-----------------CSSCCEE
T ss_pred CcCCCCcEE-EEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcc---eEEEec-----------------CCCeeEE
Confidence 556666665 33467899999976532110 112455554332110 000000 1223456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCcccc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWS 270 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S 270 (612)
+|+||+|++.|.+||......|...+|
T Consensus 70 ~i~~L~p~t~Y~~~V~A~n~~G~g~~s 96 (106)
T d1wfna1 70 RVTGLTALTTYTIEVAAMTSKGQGQVS 96 (106)
T ss_dssp EEESCCTTCEEEEEEEEECSSCEEEEE
T ss_pred EEccCCCCCEEEEEEEEECCCCCcCCc
Confidence 789999999999999865333433333
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.68 E-value=0.017 Score=46.07 Aligned_cols=82 Identities=13% Similarity=0.056 Sum_probs=44.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCC------ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEA------EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~------~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
|.+|..+.+....+.+.+.|.|......... .-.|+|...+...+... ..
T Consensus 2 PdPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~----~~-------------------- 57 (94)
T d3d85d3 2 PDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDR----VF-------------------- 57 (94)
T ss_dssp CCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CE----EE--------------------
T ss_pred CCCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEe----cc--------------------
Confidence 5678777776655567899999987532111 13566655443322110 00
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccce
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSE 272 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~ 272 (612)
...++..|.|++.|.+||......+...||+.
T Consensus 58 -~~~t~~~L~p~~~Y~v~VRa~~~~~~g~WSeW 89 (94)
T d3d85d3 58 -TDKTSATVICRKNASISVRAQDRYYSSSWSEW 89 (94)
T ss_dssp -ESSSEEEECCCSSCEEEEEEEESSSCCCCCCC
T ss_pred -ccceEEEecCCCCEEEEEEEecCCCCCCCccC
Confidence 00112358899999999998754455567764
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.22 E-value=0.046 Score=43.50 Aligned_cols=78 Identities=18% Similarity=0.114 Sum_probs=40.0
Q ss_pred eeecCCCCcEEEEEEeCCCCCCC---ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCC
Q 007227 174 LAQGKVWNEMTVTWTSGYGINEA---EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWP 250 (612)
Q Consensus 174 La~~~~~~~m~V~W~T~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~P 250 (612)
|....+.+++.|.|......... .-.|+|....+.... . .... .+-.....|.+|+|
T Consensus 11 l~v~~~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~-~---~~~~----------------~~~~~~~~l~~L~p 70 (100)
T d2gysa4 11 LQVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKD-S---KTET----------------LQNAHSMALPALEP 70 (100)
T ss_dssp EEEC---CCCEEEEEC--------CEEEEEEEECSSSCSTT-S---CEEE----------------EESCSEEECCCCCS
T ss_pred cEEEECCCEEEEEEecCcccCCccceEEEEEEeecccceec-e---eecc----------------cCCceEEEeCCCCC
Confidence 55555667899999876532111 245666544332111 0 0100 01124578999999
Q ss_pred CCEEEEEEeeecCCC--Cccccc
Q 007227 251 NAMYTYKLGHRLFNG--TYIWSS 271 (612)
Q Consensus 251 gt~Y~Yrv~~~~~~g--~~~~S~ 271 (612)
|+.|.+||.....+| ...||+
T Consensus 71 ~t~Y~~rVRa~~~~g~~~g~WSe 93 (100)
T d2gysa4 71 STRYWARVRVRTSRTGYNGIWSE 93 (100)
T ss_dssp SCCCEEEEEEEECCTTCCBCCCC
T ss_pred CCeEEEEEEEEECCCCCCCCccC
Confidence 999999998764333 234553
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.14 E-value=0.13 Score=41.20 Aligned_cols=83 Identities=11% Similarity=-0.006 Sum_probs=44.3
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCC-CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGIN-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
.+|..+..-.....++|+++|.-+.+.. +..-.+.|............ ..... .. ........+.+
T Consensus 6 ~~P~~v~~i~~~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~-~~~~~-----~~-------~~~~~~~~~~~ 72 (107)
T d1cd9b1 6 ASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGD-TIPDC-----VA-------KKRQNNCSIPR 72 (107)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCC-EEEEE-----EC-------CTTCCEEEEEG
T ss_pred CCCcCCEEEEecCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeee-eeeee-----cc-------ccCccccEEEc
Confidence 3444443212335789999998764321 12235555543322111100 00000 00 11234667889
Q ss_pred cCCCCCCEEEEEEeeec
Q 007227 246 RELWPNAMYTYKLGHRL 262 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~ 262 (612)
++|+|++.|.+||....
T Consensus 73 ~~L~~~t~Y~frV~A~N 89 (107)
T d1cd9b1 73 KNLLLYQYMAIWVQAEN 89 (107)
T ss_dssp GGCCTTSCEEEEEEEEE
T ss_pred CCCCcCceEEEEEEEEe
Confidence 99999999999998763
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.14 E-value=0.074 Score=41.61 Aligned_cols=78 Identities=13% Similarity=0.126 Sum_probs=43.4
Q ss_pred CCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEE
Q 007227 178 KVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYT 255 (612)
Q Consensus 178 ~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~ 255 (612)
...++++|.|.-..... -..-.|+|...+...+. ...+. .-....+|+||+|++.|.
T Consensus 11 ~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~----~~~~~-----------------~~~~~~~i~~L~p~t~Y~ 69 (94)
T d2dn7a1 11 TAMNTALLQWHPPKELPGELLGYRLQYCRADEARPN----TIDFG-----------------KDDQHFTVTGLHKGTTYI 69 (94)
T ss_dssp CSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCE----EEEEE-----------------TTCCEEEEECCCTTCEEE
T ss_pred EeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcE----EEEcC-----------------CCccEEEEEccCCeeEEE
Confidence 35789999998754211 11234666654432211 11111 112345689999999999
Q ss_pred EEEeeecCCCCccccceEEEEc
Q 007227 256 YKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 256 Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
+||......|...+|. ..+.|
T Consensus 70 ~~V~A~n~~G~g~~s~-~~~~T 90 (94)
T d2dn7a1 70 FRLAAKNRAGLGEEFE-KEIRT 90 (94)
T ss_dssp EEEEEEETTEEEEEEE-EEEEC
T ss_pred EEEEEEcCCcCCCCcc-EEEee
Confidence 9998764334333333 34555
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.17 E-value=0.017 Score=48.01 Aligned_cols=93 Identities=11% Similarity=0.010 Sum_probs=53.4
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCC----CCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYG----INEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~----~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
|.+|..+.+....+.++|.|+|.-... .......+.|....+... ..... . -.+-..
T Consensus 11 p~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~-------~~~~~---~---------~~~~~~ 71 (117)
T d2cspa1 11 PAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQR-------VAEVI---F---------PTADST 71 (117)
T ss_dssp CCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSE-------EEEEC---C---------TTCSEE
T ss_pred CCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeeccc-------ceeee---e---------ecccee
Confidence 345555554334456799999975321 112234666764221110 00000 0 012345
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
.++|+||+|++.|.+||......|...+|..-.++|
T Consensus 72 ~~~i~~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t 107 (117)
T d2cspa1 72 AVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPP 107 (117)
T ss_dssp EEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCCCH
T ss_pred eeeccCCCCCcEEEEEEEEEcCCCcCCCCCCEEeeC
Confidence 678999999999999998776566656777666655
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.67 E-value=0.15 Score=41.72 Aligned_cols=34 Identities=12% Similarity=-0.091 Sum_probs=25.9
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
.+.+|+|++.|.+||......|...+|+...+.+
T Consensus 75 ~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~ 108 (117)
T d1wj3a_ 75 AELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPR 108 (117)
T ss_dssp EEEECCCSSCEEEEEEEEESSCCCCBCCCEEECC
T ss_pred EEeeccCCcEEEEEEEEEcCCccCCCCCCEEEec
Confidence 4568999999999999765556666787766643
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=92.45 E-value=0.13 Score=41.10 Aligned_cols=75 Identities=15% Similarity=0.071 Sum_probs=42.2
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCC---C-CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGIN---E-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~---~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
+|..+.+ ...+.++++|+|.-..... + ..-.|+|...+..... ..... ..+.....
T Consensus 7 ~P~~v~~-~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~---~~~~~----------------~~~~~~~~ 66 (105)
T d1cfba2 7 NPDNVVG-QGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAW---ENNNI----------------FDWRQNNI 66 (105)
T ss_dssp CCSCCEE-ECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCC---EEEEE----------------CCTTCCEE
T ss_pred CCcCeEE-EEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccce---eEEEe----------------cCCCccEE
Confidence 4666665 4446789999996421100 1 1224666544322110 00000 11234466
Q ss_pred EecCCCCCCEEEEEEeeec
Q 007227 244 FLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
+|++|+|++.|.+||....
T Consensus 67 ~i~~L~p~t~Y~~~V~A~N 85 (105)
T d1cfba2 67 VIADQPTFVKYLIKVVAIN 85 (105)
T ss_dssp EECSCCSSCEEEEEEEEEE
T ss_pred EECCCCCCCEEEEEEEEEe
Confidence 8999999999999998763
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.31 E-value=0.097 Score=43.27 Aligned_cols=41 Identities=12% Similarity=-0.050 Sum_probs=28.5
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCC-----ccccceEEEEcC
Q 007227 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGT-----YIWSSEYQFKAS 278 (612)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~-----~~~S~~~~F~T~ 278 (612)
+.....+|+||+|+|.|.++|..-...|. ...|+...|+|.
T Consensus 79 ~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T~ 124 (125)
T d2dtge3 79 QNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD 124 (125)
T ss_dssp SSCCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC
T ss_pred CccCEEEECCCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEcC
Confidence 34556789999999999999986432332 235666667663
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.11 E-value=0.026 Score=45.49 Aligned_cols=39 Identities=21% Similarity=0.333 Sum_probs=29.9
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
..+...+.+|+|++ |.+||......|...||+...|.|+
T Consensus 61 ~~~~~~~~~L~~~t-Y~~rV~A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 61 LERGCRLRGLSPGN-YSVRIRATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp CTTCCCCCSCCSSE-ECCCCCEEETTBCCCCCCCCEECCC
T ss_pred ceEEEEEeccceee-EEEEEEEEcCCccCCCCCCEEEEcc
Confidence 34556789999985 9999987655566678888888874
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.84 E-value=0.27 Score=38.43 Aligned_cols=75 Identities=9% Similarity=-0.086 Sum_probs=40.7
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC-CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
|.+|.-+.+. ..+.++|+++|.-+.+.. +..-.|+|...++.... ..... .+--...+
T Consensus 4 P~~P~n~~~~-~~~~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~-----~~~~~---------------~~~~~~~~ 62 (95)
T d1bqua1 4 PEKPKNLSCI-VNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFAD-----CKAKR---------------DTPTSCTV 62 (95)
T ss_dssp CCCCEEEEEE-EETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCC-----EECCS---------------SCTTEEEC
T ss_pred cCCCeeeEEE-EccCCEEEEEEeCcccCCCceEEEEEEEEcccceeE-----eeccc---------------ccceeeee
Confidence 4455555552 335789999998765421 12335555543221110 00000 01112235
Q ss_pred ecCCCCCCEEEEEEeee
Q 007227 245 LRELWPNAMYTYKLGHR 261 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~ 261 (612)
+.+|+|++.|++||...
T Consensus 63 ~~~L~~~~~Y~f~V~A~ 79 (95)
T d1bqua1 63 DYSTVYFVNIEVWVEAE 79 (95)
T ss_dssp SSCCCTTSCEEEEEEEE
T ss_pred eeecCCCcEEEEEEEEE
Confidence 68999999999999876
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=88.16 E-value=0.47 Score=45.71 Aligned_cols=67 Identities=19% Similarity=0.238 Sum_probs=40.9
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhh-hccccCCCeEEc
Q 007227 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQI-EPIASTVPYMIA 365 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i-~~l~~~vP~~~~ 365 (612)
+.++||+|.. ...+.++.+.. ..-.-.+++||.+ ++|..+ .+-..-.+ -.+.-.--++..
T Consensus 54 v~VvGDiHG~---------------~~DL~~if~~~g~p~~~~ylFLGDYV-DRG~~s-lE~i~lL~aLKi~~P~~v~lL 116 (294)
T d1jk7a_ 54 LKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYV-DRGKQS-LETICLLLAYKIKYPENFFLL 116 (294)
T ss_dssp EEEECBCTTC---------------HHHHHHHHHHHCCTTSSCEEECSCCS-SSSSCH-HHHHHHHHHHHHHSTTTEEEC
T ss_pred eEEEEECCCC---------------hHhHHHHHhhcCCCccceEEeecccc-CCCccc-hHHHHHHHHHHhhCCCeEEEe
Confidence 7999999743 34556666642 2234578899999 666543 23221111 112234568999
Q ss_pred cCCCccC
Q 007227 366 SGNHERD 372 (612)
Q Consensus 366 ~GNHD~~ 372 (612)
+||||..
T Consensus 117 RGNHE~~ 123 (294)
T d1jk7a_ 117 RGNHECA 123 (294)
T ss_dssp CCTTSSH
T ss_pred cCCcccc
Confidence 9999975
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.11 E-value=0.44 Score=46.52 Aligned_cols=68 Identities=16% Similarity=0.207 Sum_probs=40.9
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCC-C--CEEEEcCccccCCCcccHHHHHHHhh-hccccCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN-I--DIVFHIGDICYANGYISQWDQFTAQI-EPIASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~-p--dfvl~~GDi~Y~~g~~~~wd~f~~~i-~~l~~~vP~~ 363 (612)
.+.++||+|.. ...+.++.+...- + .-.+++||++ ++|..+ .+-..-.+ -.+.-.--++
T Consensus 61 pv~VvGDiHGq---------------~~DL~~if~~~g~p~~~~~ylFLGDYV-DRG~~s-lEvi~lL~~lKi~yP~~v~ 123 (324)
T d1s95a_ 61 KITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFV-DRGSFS-VEVILTLFGFKLLYPDHFH 123 (324)
T ss_dssp EEEEECCCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCS-SSSTTH-HHHHHHHHHHHHHSTTTEE
T ss_pred CEEEEEECCCC---------------HHHHHHHHHHCCCCCCCCeEEEecccc-cCcCcc-eeehHHHHHHHHhCCCcEE
Confidence 58999999853 3456666664322 2 2478899999 666532 23221111 1122234689
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
..+||||..
T Consensus 124 LLRGNHE~~ 132 (324)
T d1s95a_ 124 LLRGNHETD 132 (324)
T ss_dssp EECCTTSSH
T ss_pred eccCCcccc
Confidence 999999964
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.88 E-value=0.46 Score=45.62 Aligned_cols=67 Identities=22% Similarity=0.288 Sum_probs=40.4
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCC--CCEEEEcCccccCCCcccHHHHHHHhh-hccccCCCeEEc
Q 007227 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN--IDIVFHIGDICYANGYISQWDQFTAQI-EPIASTVPYMIA 365 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~--pdfvl~~GDi~Y~~g~~~~wd~f~~~i-~~l~~~vP~~~~ 365 (612)
+.++||+|.. ...+.++.+.... -.-.+++||.+ ++|..+ -+-..-.+ -.+.-.--++..
T Consensus 47 v~VvGDlHG~---------------~~DL~~if~~~g~p~~~~ylFLGDYV-DRG~~s-lEvl~lL~alKi~~P~~v~lL 109 (288)
T d3c5wc1 47 VTVCGDVHGQ---------------FHDLMELFRIGGKSPDTNYLFMGDYV-DRGYYS-VETVTLLVALKVRYRERITIL 109 (288)
T ss_dssp EEEECBCTTC---------------HHHHHHHHHHHCCTTTSCEEECSCCC-CSSSSH-HHHHHHHHHHHHHCTTTEEEC
T ss_pred eEEEeeCCCC---------------HHHHHHHHHhcCCCccceEEecCccc-CCCCcc-eeHHHHHHHHHhhCCCeEEEe
Confidence 8999999743 3456666665322 23578899999 666532 12211111 112334568999
Q ss_pred cCCCccC
Q 007227 366 SGNHERD 372 (612)
Q Consensus 366 ~GNHD~~ 372 (612)
+||||..
T Consensus 110 RGNHE~~ 116 (288)
T d3c5wc1 110 RGNHESR 116 (288)
T ss_dssp CCTTSSH
T ss_pred ccCCccc
Confidence 9999964
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.83 E-value=0.44 Score=37.10 Aligned_cols=37 Identities=8% Similarity=-0.101 Sum_probs=26.0
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEE
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQF 275 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F 275 (612)
......+++|.|++.|.+||......|...|++.-.|
T Consensus 55 ~~~~~~~~~l~~~~~Y~fRV~A~n~~g~S~ws~s~~f 91 (98)
T d1fyhb1 55 HYCNISDHVGDPSNSLWVRVKARVGQKESAYAKSEEF 91 (98)
T ss_dssp SEEECGGGCCSTTSCEEEEEEEEETTEECCCEECCCB
T ss_pred ceeeeEecccCCCCEEEEEEEEEcCCcccCCccCCCc
Confidence 3445668999999999999998754454556554333
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.10 E-value=0.75 Score=46.95 Aligned_cols=25 Identities=8% Similarity=-0.007 Sum_probs=22.0
Q ss_pred hHHHHHHHHHhCCCeEEEecccccc
Q 007227 479 GRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 479 ~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
+.+++...|+++++++++=||.=.-
T Consensus 248 G~~a~~~FL~~n~L~~IIR~HE~~~ 272 (473)
T d1auia_ 248 SYPAVCEFLQHNNLLSILRAHEAQD 272 (473)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCT
T ss_pred ChHHHHHHHHHcCCcEEEEcCcchh
Confidence 4689999999999999999998653
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.01 E-value=0.55 Score=40.06 Aligned_cols=39 Identities=10% Similarity=-0.030 Sum_probs=28.2
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEcCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYI---WSSEYQFKASP 279 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~---~S~~~~F~T~p 279 (612)
...+|+||+|+|.|.+||.....+|... .+....|||.|
T Consensus 155 ~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 155 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 3577999999999999998653333322 24667888876
|